###################################
802 groups of orthologs
858 in-paralogs from T.annulata
955 in-paralogs from T.brucei
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1723 bits
Score difference with first non-orthologous sequence - T.annulata:1723 T.brucei:1723

Q4UCE6              	100.00%		Q38DR4              	100.00%
Bootstrap support for Q4UCE6 as seed ortholog is 100%.
Bootstrap support for Q38DR4 as seed ortholog is 100%.

Group of orthologs #2. Best score 1069 bits
Score difference with first non-orthologous sequence - T.annulata:1069 T.brucei:1069

Q4UD12              	100.00%		Q57U86              	100.00%
Bootstrap support for Q4UD12 as seed ortholog is 100%.
Bootstrap support for Q57U86 as seed ortholog is 100%.

Group of orthologs #3. Best score 1010 bits
Score difference with first non-orthologous sequence - T.annulata:366 T.brucei:762

Q4UID0              	100.00%		Q38B27              	100.00%
Bootstrap support for Q4UID0 as seed ortholog is 100%.
Bootstrap support for Q38B27 as seed ortholog is 100%.

Group of orthologs #4. Best score 997 bits
Score difference with first non-orthologous sequence - T.annulata:685 T.brucei:793

Q4UH76              	100.00%		Q38BE4              	100.00%
Bootstrap support for Q4UH76 as seed ortholog is 100%.
Bootstrap support for Q38BE4 as seed ortholog is 100%.

Group of orthologs #5. Best score 993 bits
Score difference with first non-orthologous sequence - T.annulata:993 T.brucei:993

Q4UCP5              	100.00%		Q584K3              	100.00%
                    	       		Q57YU2              	99.84%
Bootstrap support for Q4UCP5 as seed ortholog is 100%.
Bootstrap support for Q584K3 as seed ortholog is 100%.

Group of orthologs #6. Best score 984 bits
Score difference with first non-orthologous sequence - T.annulata:793 T.brucei:984

Q4UE11              	100.00%		Q38A55              	100.00%
Bootstrap support for Q4UE11 as seed ortholog is 100%.
Bootstrap support for Q38A55 as seed ortholog is 100%.

Group of orthologs #7. Best score 975 bits
Score difference with first non-orthologous sequence - T.annulata:975 T.brucei:377

Q4UEG9              	100.00%		Q383C4              	100.00%
Bootstrap support for Q4UEG9 as seed ortholog is 100%.
Bootstrap support for Q383C4 as seed ortholog is 100%.

Group of orthologs #8. Best score 972 bits
Score difference with first non-orthologous sequence - T.annulata:190 T.brucei:508

Q4UHC2              	100.00%		Q385X9              	100.00%
Bootstrap support for Q4UHC2 as seed ortholog is 98%.
Bootstrap support for Q385X9 as seed ortholog is 100%.

Group of orthologs #9. Best score 955 bits
Score difference with first non-orthologous sequence - T.annulata:955 T.brucei:955

Q4U9X1              	100.00%		Q583H5              	100.00%
Bootstrap support for Q4U9X1 as seed ortholog is 100%.
Bootstrap support for Q583H5 as seed ortholog is 100%.

Group of orthologs #10. Best score 947 bits
Score difference with first non-orthologous sequence - T.annulata:947 T.brucei:947

Q4UIP2              	100.00%		Q388J9              	100.00%
Bootstrap support for Q4UIP2 as seed ortholog is 100%.
Bootstrap support for Q388J9 as seed ortholog is 100%.

Group of orthologs #11. Best score 909 bits
Score difference with first non-orthologous sequence - T.annulata:453 T.brucei:468

Q4UDU8              	100.00%		Q389P1              	100.00%
Bootstrap support for Q4UDU8 as seed ortholog is 100%.
Bootstrap support for Q389P1 as seed ortholog is 100%.

Group of orthologs #12. Best score 907 bits
Score difference with first non-orthologous sequence - T.annulata:907 T.brucei:907

Q4UBQ2              	100.00%		Q384N4              	100.00%
Bootstrap support for Q4UBQ2 as seed ortholog is 100%.
Bootstrap support for Q384N4 as seed ortholog is 100%.

Group of orthologs #13. Best score 871 bits
Score difference with first non-orthologous sequence - T.annulata:871 T.brucei:871

Q4U940              	100.00%		Q38BW7              	100.00%
Bootstrap support for Q4U940 as seed ortholog is 100%.
Bootstrap support for Q38BW7 as seed ortholog is 100%.

Group of orthologs #14. Best score 839 bits
Score difference with first non-orthologous sequence - T.annulata:179 T.brucei:90

P16019              	100.00%		Q383E5              	100.00%
Bootstrap support for P16019 as seed ortholog is 99%.
Bootstrap support for Q383E5 as seed ortholog is 97%.

Group of orthologs #15. Best score 838 bits
Score difference with first non-orthologous sequence - T.annulata:838 T.brucei:838

Q4UB41              	100.00%		Q4GZE8              	100.00%
Bootstrap support for Q4UB41 as seed ortholog is 100%.
Bootstrap support for Q4GZE8 as seed ortholog is 100%.

Group of orthologs #16. Best score 789 bits
Score difference with first non-orthologous sequence - T.annulata:789 T.brucei:789

Q4UFS0              	100.00%		Q57U46              	100.00%
Bootstrap support for Q4UFS0 as seed ortholog is 100%.
Bootstrap support for Q57U46 as seed ortholog is 100%.

Group of orthologs #17. Best score 780 bits
Score difference with first non-orthologous sequence - T.annulata:431 T.brucei:572

Q4UEG7              	100.00%		Q4GYY6              	100.00%
Bootstrap support for Q4UEG7 as seed ortholog is 100%.
Bootstrap support for Q4GYY6 as seed ortholog is 100%.

Group of orthologs #18. Best score 760 bits
Score difference with first non-orthologous sequence - T.annulata:222 T.brucei:201

Q4UFA6              	100.00%		Q585X3              	100.00%
Bootstrap support for Q4UFA6 as seed ortholog is 100%.
Bootstrap support for Q585X3 as seed ortholog is 100%.

Group of orthologs #19. Best score 759 bits
Score difference with first non-orthologous sequence - T.annulata:759 T.brucei:759

Q4U8N2              	100.00%		Q38DX2              	100.00%
Bootstrap support for Q4U8N2 as seed ortholog is 100%.
Bootstrap support for Q38DX2 as seed ortholog is 100%.

Group of orthologs #20. Best score 739 bits
Score difference with first non-orthologous sequence - T.annulata:739 T.brucei:691

Q4U8J4              	100.00%		Q38C78              	100.00%
Bootstrap support for Q4U8J4 as seed ortholog is 100%.
Bootstrap support for Q38C78 as seed ortholog is 100%.

Group of orthologs #21. Best score 734 bits
Score difference with first non-orthologous sequence - T.annulata:105 T.brucei:576

Q4UAJ5              	100.00%		Q4GYY5              	100.00%
Bootstrap support for Q4UAJ5 as seed ortholog is 99%.
Bootstrap support for Q4GYY5 as seed ortholog is 100%.

Group of orthologs #22. Best score 727 bits
Score difference with first non-orthologous sequence - T.annulata:727 T.brucei:727

Q4UI92              	100.00%		Q585S7              	100.00%
Bootstrap support for Q4UI92 as seed ortholog is 100%.
Bootstrap support for Q585S7 as seed ortholog is 100%.

Group of orthologs #23. Best score 710 bits
Score difference with first non-orthologous sequence - T.annulata:710 T.brucei:710

Q4UBI9              	100.00%		Q4GZD0              	100.00%
Bootstrap support for Q4UBI9 as seed ortholog is 100%.
Bootstrap support for Q4GZD0 as seed ortholog is 100%.

Group of orthologs #24. Best score 710 bits
Score difference with first non-orthologous sequence - T.annulata:595 T.brucei:710

Q4U8V3              	100.00%		Q587B4              	100.00%
Bootstrap support for Q4U8V3 as seed ortholog is 100%.
Bootstrap support for Q587B4 as seed ortholog is 100%.

Group of orthologs #25. Best score 705 bits
Score difference with first non-orthologous sequence - T.annulata:705 T.brucei:705

Q4U8X7              	100.00%		Q580D6              	100.00%
Bootstrap support for Q4U8X7 as seed ortholog is 100%.
Bootstrap support for Q580D6 as seed ortholog is 100%.

Group of orthologs #26. Best score 666 bits
Score difference with first non-orthologous sequence - T.annulata:541 T.brucei:463

Q4UHR5              	100.00%		P86939              	100.00%
                    	       		P86934              	100.00%
                    	       		Q38C34              	13.56%
Bootstrap support for Q4UHR5 as seed ortholog is 100%.
Bootstrap support for P86939 as seed ortholog is 100%.
Bootstrap support for P86934 as seed ortholog is 100%.

Group of orthologs #27. Best score 663 bits
Score difference with first non-orthologous sequence - T.annulata:283 T.brucei:246

Q4UEM8              	100.00%		Q57Z55              	100.00%
Bootstrap support for Q4UEM8 as seed ortholog is 100%.
Bootstrap support for Q57Z55 as seed ortholog is 99%.

Group of orthologs #28. Best score 659 bits
Score difference with first non-orthologous sequence - T.annulata:195 T.brucei:659

Q4UEM0              	100.00%		Q38AL9              	100.00%
Bootstrap support for Q4UEM0 as seed ortholog is 99%.
Bootstrap support for Q38AL9 as seed ortholog is 100%.

Group of orthologs #29. Best score 647 bits
Score difference with first non-orthologous sequence - T.annulata:182 T.brucei:647

Q4UAC3              	100.00%		Q586B8              	100.00%
Bootstrap support for Q4UAC3 as seed ortholog is 97%.
Bootstrap support for Q586B8 as seed ortholog is 100%.

Group of orthologs #30. Best score 628 bits
Score difference with first non-orthologous sequence - T.annulata:628 T.brucei:628

Q4UIJ4              	100.00%		Q583T3              	100.00%
Bootstrap support for Q4UIJ4 as seed ortholog is 100%.
Bootstrap support for Q583T3 as seed ortholog is 100%.

Group of orthologs #31. Best score 626 bits
Score difference with first non-orthologous sequence - T.annulata:142 T.brucei:112

Q4UIK9              	100.00%		D6XG53              	100.00%
Bootstrap support for Q4UIK9 as seed ortholog is 99%.
Bootstrap support for D6XG53 as seed ortholog is 98%.

Group of orthologs #32. Best score 617 bits
Score difference with first non-orthologous sequence - T.annulata:617 T.brucei:617

Q4U9M4              	100.00%		Q383B1              	100.00%
Bootstrap support for Q4U9M4 as seed ortholog is 100%.
Bootstrap support for Q383B1 as seed ortholog is 100%.

Group of orthologs #33. Best score 616 bits
Score difference with first non-orthologous sequence - T.annulata:616 T.brucei:616

Q4UCY6              	100.00%		Q580J2              	100.00%
                    	       		Q385R3              	11.30%
Bootstrap support for Q4UCY6 as seed ortholog is 100%.
Bootstrap support for Q580J2 as seed ortholog is 100%.

Group of orthologs #34. Best score 614 bits
Score difference with first non-orthologous sequence - T.annulata:485 T.brucei:614

Q4U991              	100.00%		Q386D9              	100.00%
Bootstrap support for Q4U991 as seed ortholog is 100%.
Bootstrap support for Q386D9 as seed ortholog is 100%.

Group of orthologs #35. Best score 596 bits
Score difference with first non-orthologous sequence - T.annulata:520 T.brucei:596

Q4UCM0              	100.00%		Q38DP9              	100.00%
Bootstrap support for Q4UCM0 as seed ortholog is 100%.
Bootstrap support for Q38DP9 as seed ortholog is 100%.

Group of orthologs #36. Best score 589 bits
Score difference with first non-orthologous sequence - T.annulata:496 T.brucei:198

Q4UFW2              	100.00%		Q581T0              	100.00%
Bootstrap support for Q4UFW2 as seed ortholog is 100%.
Bootstrap support for Q581T0 as seed ortholog is 99%.

Group of orthologs #37. Best score 584 bits
Score difference with first non-orthologous sequence - T.annulata:283 T.brucei:303

Q4UFN5              	100.00%		Q38E94              	100.00%
Bootstrap support for Q4UFN5 as seed ortholog is 100%.
Bootstrap support for Q38E94 as seed ortholog is 100%.

Group of orthologs #38. Best score 584 bits
Score difference with first non-orthologous sequence - T.annulata:584 T.brucei:584

Q4UDN0              	100.00%		Q586X2              	100.00%
Bootstrap support for Q4UDN0 as seed ortholog is 100%.
Bootstrap support for Q586X2 as seed ortholog is 100%.

Group of orthologs #39. Best score 583 bits
Score difference with first non-orthologous sequence - T.annulata:53 T.brucei:114

Q4UH89              	100.00%		Q38AN5              	100.00%
Bootstrap support for Q4UH89 as seed ortholog is 83%.
Bootstrap support for Q38AN5 as seed ortholog is 99%.

Group of orthologs #40. Best score 574 bits
Score difference with first non-orthologous sequence - T.annulata:574 T.brucei:574

Q4UDZ0              	100.00%		Q382B2              	100.00%
Bootstrap support for Q4UDZ0 as seed ortholog is 100%.
Bootstrap support for Q382B2 as seed ortholog is 100%.

Group of orthologs #41. Best score 572 bits
Score difference with first non-orthologous sequence - T.annulata:572 T.brucei:505

Q4UA86              	100.00%		Q57XD7              	100.00%
Bootstrap support for Q4UA86 as seed ortholog is 100%.
Bootstrap support for Q57XD7 as seed ortholog is 100%.

Group of orthologs #42. Best score 572 bits
Score difference with first non-orthologous sequence - T.annulata:572 T.brucei:572

Q4UGW6              	100.00%		Q57XX1              	100.00%
Bootstrap support for Q4UGW6 as seed ortholog is 100%.
Bootstrap support for Q57XX1 as seed ortholog is 100%.

Group of orthologs #43. Best score 562 bits
Score difference with first non-orthologous sequence - T.annulata:562 T.brucei:562

Q4UIF0              	100.00%		Q57W54              	100.00%
Bootstrap support for Q4UIF0 as seed ortholog is 100%.
Bootstrap support for Q57W54 as seed ortholog is 100%.

Group of orthologs #44. Best score 560 bits
Score difference with first non-orthologous sequence - T.annulata:560 T.brucei:514

Q4UB55              	100.00%		Q386W9              	100.00%
Bootstrap support for Q4UB55 as seed ortholog is 100%.
Bootstrap support for Q386W9 as seed ortholog is 100%.

Group of orthologs #45. Best score 559 bits
Score difference with first non-orthologous sequence - T.annulata:559 T.brucei:559

Q4UI00              	100.00%		Q57UI1              	100.00%
Bootstrap support for Q4UI00 as seed ortholog is 100%.
Bootstrap support for Q57UI1 as seed ortholog is 100%.

Group of orthologs #46. Best score 544 bits
Score difference with first non-orthologous sequence - T.annulata:475 T.brucei:427

Q4UHP7              	100.00%		D6XKG7              	100.00%
Bootstrap support for Q4UHP7 as seed ortholog is 100%.
Bootstrap support for D6XKG7 as seed ortholog is 100%.

Group of orthologs #47. Best score 542 bits
Score difference with first non-orthologous sequence - T.annulata:343 T.brucei:369

Q4UEX3              	100.00%		Q38BK1              	100.00%
Bootstrap support for Q4UEX3 as seed ortholog is 100%.
Bootstrap support for Q38BK1 as seed ortholog is 100%.

Group of orthologs #48. Best score 534 bits
Score difference with first non-orthologous sequence - T.annulata:534 T.brucei:406

Q4UI30              	100.00%		Q386D8              	100.00%
Bootstrap support for Q4UI30 as seed ortholog is 100%.
Bootstrap support for Q386D8 as seed ortholog is 100%.

Group of orthologs #49. Best score 534 bits
Score difference with first non-orthologous sequence - T.annulata:534 T.brucei:483

Q4UGI2              	100.00%		Q38CD4              	100.00%
Bootstrap support for Q4UGI2 as seed ortholog is 100%.
Bootstrap support for Q38CD4 as seed ortholog is 100%.

Group of orthologs #50. Best score 532 bits
Score difference with first non-orthologous sequence - T.annulata:188 T.brucei:195

Q4UAL9              	100.00%		Q38AV5              	100.00%
                    	       		Q381T1              	14.18%
Bootstrap support for Q4UAL9 as seed ortholog is 99%.
Bootstrap support for Q38AV5 as seed ortholog is 100%.

Group of orthologs #51. Best score 528 bits
Score difference with first non-orthologous sequence - T.annulata:528 T.brucei:528

Q4UCK6              	100.00%		Q57TV5              	100.00%
Bootstrap support for Q4UCK6 as seed ortholog is 100%.
Bootstrap support for Q57TV5 as seed ortholog is 100%.

Group of orthologs #52. Best score 527 bits
Score difference with first non-orthologous sequence - T.annulata:527 T.brucei:527

Q4UAV1              	100.00%		Q385E6              	100.00%
Bootstrap support for Q4UAV1 as seed ortholog is 100%.
Bootstrap support for Q385E6 as seed ortholog is 100%.

Group of orthologs #53. Best score 526 bits
Score difference with first non-orthologous sequence - T.annulata:139 T.brucei:251

Q4UAY6              	100.00%		Q38BA0              	100.00%
Bootstrap support for Q4UAY6 as seed ortholog is 99%.
Bootstrap support for Q38BA0 as seed ortholog is 99%.

Group of orthologs #54. Best score 519 bits
Score difference with first non-orthologous sequence - T.annulata:519 T.brucei:348

Q4UIC8              	100.00%		Q585S8              	100.00%
Bootstrap support for Q4UIC8 as seed ortholog is 100%.
Bootstrap support for Q585S8 as seed ortholog is 100%.

Group of orthologs #55. Best score 517 bits
Score difference with first non-orthologous sequence - T.annulata:517 T.brucei:517

Q4UGB9              	100.00%		Q388V7              	100.00%
Bootstrap support for Q4UGB9 as seed ortholog is 100%.
Bootstrap support for Q388V7 as seed ortholog is 100%.

Group of orthologs #56. Best score 515 bits
Score difference with first non-orthologous sequence - T.annulata:515 T.brucei:139

Q4UGL8              	100.00%		Q38AS7              	100.00%
Bootstrap support for Q4UGL8 as seed ortholog is 100%.
Bootstrap support for Q38AS7 as seed ortholog is 99%.

Group of orthologs #57. Best score 513 bits
Score difference with first non-orthologous sequence - T.annulata:513 T.brucei:513

Q4UBZ8              	100.00%		Q583J3              	100.00%
Bootstrap support for Q4UBZ8 as seed ortholog is 100%.
Bootstrap support for Q583J3 as seed ortholog is 100%.

Group of orthologs #58. Best score 512 bits
Score difference with first non-orthologous sequence - T.annulata:512 T.brucei:512

Q4UCP7              	100.00%		Q381B0              	100.00%
Bootstrap support for Q4UCP7 as seed ortholog is 100%.
Bootstrap support for Q381B0 as seed ortholog is 100%.

Group of orthologs #59. Best score 512 bits
Score difference with first non-orthologous sequence - T.annulata:512 T.brucei:512

Q4U8Y7              	100.00%		Q38BV6              	100.00%
Bootstrap support for Q4U8Y7 as seed ortholog is 100%.
Bootstrap support for Q38BV6 as seed ortholog is 100%.

Group of orthologs #60. Best score 505 bits
Score difference with first non-orthologous sequence - T.annulata:505 T.brucei:505

Q4U8H1              	100.00%		Q38EX6              	100.00%
Bootstrap support for Q4U8H1 as seed ortholog is 100%.
Bootstrap support for Q38EX6 as seed ortholog is 100%.

Group of orthologs #61. Best score 504 bits
Score difference with first non-orthologous sequence - T.annulata:440 T.brucei:359

Q4UDH7              	100.00%		Q38CG6              	100.00%
Bootstrap support for Q4UDH7 as seed ortholog is 100%.
Bootstrap support for Q38CG6 as seed ortholog is 72%.
Alternative seed ortholog is Q57UB5 (359 bits away from this cluster)

Group of orthologs #62. Best score 500 bits
Score difference with first non-orthologous sequence - T.annulata:500 T.brucei:500

Q4UH14              	100.00%		Q383W5              	100.00%
Bootstrap support for Q4UH14 as seed ortholog is 100%.
Bootstrap support for Q383W5 as seed ortholog is 100%.

Group of orthologs #63. Best score 500 bits
Score difference with first non-orthologous sequence - T.annulata:500 T.brucei:368

Q4UFM6              	100.00%		Q38A02              	100.00%
Bootstrap support for Q4UFM6 as seed ortholog is 100%.
Bootstrap support for Q38A02 as seed ortholog is 100%.

Group of orthologs #64. Best score 500 bits
Score difference with first non-orthologous sequence - T.annulata:500 T.brucei:500

Q4UDM4              	100.00%		Q4GZ63              	100.00%
Bootstrap support for Q4UDM4 as seed ortholog is 100%.
Bootstrap support for Q4GZ63 as seed ortholog is 100%.

Group of orthologs #65. Best score 498 bits
Score difference with first non-orthologous sequence - T.annulata:498 T.brucei:498

Q4U966              	100.00%		Q387G0              	100.00%
                    	       		Q580Y9              	9.04%
Bootstrap support for Q4U966 as seed ortholog is 100%.
Bootstrap support for Q387G0 as seed ortholog is 100%.

Group of orthologs #66. Best score 495 bits
Score difference with first non-orthologous sequence - T.annulata:495 T.brucei:380

Q4UAQ2              	100.00%		D6XHJ3              	100.00%
Bootstrap support for Q4UAQ2 as seed ortholog is 100%.
Bootstrap support for D6XHJ3 as seed ortholog is 100%.

Group of orthologs #67. Best score 495 bits
Score difference with first non-orthologous sequence - T.annulata:371 T.brucei:338

Q4UGA8              	100.00%		Q57YJ9              	100.00%
Bootstrap support for Q4UGA8 as seed ortholog is 100%.
Bootstrap support for Q57YJ9 as seed ortholog is 100%.

Group of orthologs #68. Best score 493 bits
Score difference with first non-orthologous sequence - T.annulata:493 T.brucei:493

Q4UDV5              	100.00%		Q582B4              	100.00%
Bootstrap support for Q4UDV5 as seed ortholog is 100%.
Bootstrap support for Q582B4 as seed ortholog is 100%.

Group of orthologs #69. Best score 489 bits
Score difference with first non-orthologous sequence - T.annulata:489 T.brucei:489

Q4UFR9              	100.00%		Q386I7              	100.00%
Bootstrap support for Q4UFR9 as seed ortholog is 100%.
Bootstrap support for Q386I7 as seed ortholog is 100%.

Group of orthologs #70. Best score 483 bits
Score difference with first non-orthologous sequence - T.annulata:483 T.brucei:483

Q4UD01              	100.00%		Q384C0              	100.00%
Bootstrap support for Q4UD01 as seed ortholog is 100%.
Bootstrap support for Q384C0 as seed ortholog is 100%.

Group of orthologs #71. Best score 482 bits
Score difference with first non-orthologous sequence - T.annulata:364 T.brucei:365

Q4UGM6              	100.00%		Q57XL9              	100.00%
Bootstrap support for Q4UGM6 as seed ortholog is 100%.
Bootstrap support for Q57XL9 as seed ortholog is 100%.

Group of orthologs #72. Best score 481 bits
Score difference with first non-orthologous sequence - T.annulata:481 T.brucei:481

Q4UDV2              	100.00%		Q386J9              	100.00%
Bootstrap support for Q4UDV2 as seed ortholog is 100%.
Bootstrap support for Q386J9 as seed ortholog is 100%.

Group of orthologs #73. Best score 480 bits
Score difference with first non-orthologous sequence - T.annulata:203 T.brucei:65

Q4UE52              	100.00%		Q384L0              	100.00%
Bootstrap support for Q4UE52 as seed ortholog is 100%.
Bootstrap support for Q384L0 as seed ortholog is 99%.

Group of orthologs #74. Best score 479 bits
Score difference with first non-orthologous sequence - T.annulata:479 T.brucei:479

Q4UCU9              	100.00%		Q387A7              	100.00%
                    	       		Q383T1              	9.45%
Bootstrap support for Q4UCU9 as seed ortholog is 100%.
Bootstrap support for Q387A7 as seed ortholog is 100%.

Group of orthologs #75. Best score 478 bits
Score difference with first non-orthologous sequence - T.annulata:478 T.brucei:478

Q4UCL9              	100.00%		Q382Z6              	100.00%
Bootstrap support for Q4UCL9 as seed ortholog is 100%.
Bootstrap support for Q382Z6 as seed ortholog is 100%.

Group of orthologs #76. Best score 477 bits
Score difference with first non-orthologous sequence - T.annulata:477 T.brucei:477

Q4U921              	100.00%		Q581V4              	100.00%
Bootstrap support for Q4U921 as seed ortholog is 100%.
Bootstrap support for Q581V4 as seed ortholog is 100%.

Group of orthologs #77. Best score 475 bits
Score difference with first non-orthologous sequence - T.annulata:475 T.brucei:475

Q4UEL2              	100.00%		Q38CM1              	100.00%
Bootstrap support for Q4UEL2 as seed ortholog is 100%.
Bootstrap support for Q38CM1 as seed ortholog is 100%.

Group of orthologs #78. Best score 474 bits
Score difference with first non-orthologous sequence - T.annulata:320 T.brucei:474

Q4UH40              	100.00%		Q384R7              	100.00%
Bootstrap support for Q4UH40 as seed ortholog is 100%.
Bootstrap support for Q384R7 as seed ortholog is 100%.

Group of orthologs #79. Best score 471 bits
Score difference with first non-orthologous sequence - T.annulata:251 T.brucei:285

Q4UHV5              	100.00%		Q384F2              	100.00%
Bootstrap support for Q4UHV5 as seed ortholog is 100%.
Bootstrap support for Q384F2 as seed ortholog is 100%.

Group of orthologs #80. Best score 468 bits
Score difference with first non-orthologous sequence - T.annulata:104 T.brucei:276

Q4UJ01              	100.00%		Q386Y8              	100.00%
Bootstrap support for Q4UJ01 as seed ortholog is 96%.
Bootstrap support for Q386Y8 as seed ortholog is 100%.

Group of orthologs #81. Best score 466 bits
Score difference with first non-orthologous sequence - T.annulata:337 T.brucei:36

Q4UF46              	100.00%		Q57XC5              	100.00%
Bootstrap support for Q4UF46 as seed ortholog is 100%.
Bootstrap support for Q57XC5 as seed ortholog is 68%.
Alternative seed ortholog is Q38DE8 (36 bits away from this cluster)

Group of orthologs #82. Best score 464 bits
Score difference with first non-orthologous sequence - T.annulata:464 T.brucei:88

Q4UF58              	100.00%		Q38AJ0              	100.00%
Bootstrap support for Q4UF58 as seed ortholog is 100%.
Bootstrap support for Q38AJ0 as seed ortholog is 90%.

Group of orthologs #83. Best score 463 bits
Score difference with first non-orthologous sequence - T.annulata:463 T.brucei:463

Q4UGR9              	100.00%		Q382L1              	100.00%
Bootstrap support for Q4UGR9 as seed ortholog is 100%.
Bootstrap support for Q382L1 as seed ortholog is 100%.

Group of orthologs #84. Best score 463 bits
Score difference with first non-orthologous sequence - T.annulata:463 T.brucei:463

Q4UFA3              	100.00%		Q386S9              	100.00%
Bootstrap support for Q4UFA3 as seed ortholog is 100%.
Bootstrap support for Q386S9 as seed ortholog is 100%.

Group of orthologs #85. Best score 462 bits
Score difference with first non-orthologous sequence - T.annulata:462 T.brucei:22

Q4UDK6              	100.00%		Q57X05              	100.00%
Bootstrap support for Q4UDK6 as seed ortholog is 100%.
Bootstrap support for Q57X05 as seed ortholog is 67%.
Alternative seed ortholog is Q57YY2 (22 bits away from this cluster)

Group of orthologs #86. Best score 460 bits
Score difference with first non-orthologous sequence - T.annulata:353 T.brucei:460

Q4UFY9              	100.00%		Q386Y7              	100.00%
Bootstrap support for Q4UFY9 as seed ortholog is 100%.
Bootstrap support for Q386Y7 as seed ortholog is 100%.

Group of orthologs #87. Best score 459 bits
Score difference with first non-orthologous sequence - T.annulata:459 T.brucei:459

Q4UAK0              	100.00%		Q57YZ8              	100.00%
Bootstrap support for Q4UAK0 as seed ortholog is 100%.
Bootstrap support for Q57YZ8 as seed ortholog is 100%.

Group of orthologs #88. Best score 455 bits
Score difference with first non-orthologous sequence - T.annulata:455 T.brucei:455

Q4UH39              	100.00%		Q586V2              	100.00%
Bootstrap support for Q4UH39 as seed ortholog is 100%.
Bootstrap support for Q586V2 as seed ortholog is 100%.

Group of orthologs #89. Best score 447 bits
Score difference with first non-orthologous sequence - T.annulata:447 T.brucei:447

Q4UIP5              	100.00%		Q587C5              	100.00%
Bootstrap support for Q4UIP5 as seed ortholog is 100%.
Bootstrap support for Q587C5 as seed ortholog is 100%.

Group of orthologs #90. Best score 446 bits
Score difference with first non-orthologous sequence - T.annulata:207 T.brucei:161

Q4UEN3              	100.00%		Q384N2              	100.00%
Bootstrap support for Q4UEN3 as seed ortholog is 99%.
Bootstrap support for Q384N2 as seed ortholog is 99%.

Group of orthologs #91. Best score 446 bits
Score difference with first non-orthologous sequence - T.annulata:446 T.brucei:446

Q4UI41              	100.00%		Q385M8              	100.00%
Bootstrap support for Q4UI41 as seed ortholog is 100%.
Bootstrap support for Q385M8 as seed ortholog is 100%.

Group of orthologs #92. Best score 442 bits
Score difference with first non-orthologous sequence - T.annulata:247 T.brucei:127

Q4U8M6              	100.00%		Q38AY0              	100.00%
Bootstrap support for Q4U8M6 as seed ortholog is 100%.
Bootstrap support for Q38AY0 as seed ortholog is 99%.

Group of orthologs #93. Best score 439 bits
Score difference with first non-orthologous sequence - T.annulata:439 T.brucei:439

Q4UI21              	100.00%		Q386R7              	100.00%
                    	       		D6XEZ2              	29.75%
                    	       		Q580B5              	9.47%
                    	       		Q57VT8              	8.44%
                    	       		Q57YY8              	8.31%
                    	       		Q57YC6              	8.31%
                    	       		Q384K3              	7.64%
                    	       		Q386I6              	7.42%
                    	       		Q38B68              	7.31%
                    	       		Q57WX6              	7.25%
                    	       		Q585U4              	7.16%
                    	       		Q383F6              	6.43%
Bootstrap support for Q4UI21 as seed ortholog is 100%.
Bootstrap support for Q386R7 as seed ortholog is 100%.

Group of orthologs #94. Best score 439 bits
Score difference with first non-orthologous sequence - T.annulata:439 T.brucei:439

Q4UFH6              	100.00%		Q4GZ95              	100.00%
Bootstrap support for Q4UFH6 as seed ortholog is 100%.
Bootstrap support for Q4GZ95 as seed ortholog is 100%.

Group of orthologs #95. Best score 434 bits
Score difference with first non-orthologous sequence - T.annulata:202 T.brucei:246

Q4UDI3              	100.00%		Q38F76              	100.00%
Bootstrap support for Q4UDI3 as seed ortholog is 100%.
Bootstrap support for Q38F76 as seed ortholog is 100%.

Group of orthologs #96. Best score 427 bits
Score difference with first non-orthologous sequence - T.annulata:234 T.brucei:81

Q4UC52              	100.00%		Q580G3              	100.00%
Bootstrap support for Q4UC52 as seed ortholog is 100%.
Bootstrap support for Q580G3 as seed ortholog is 96%.

Group of orthologs #97. Best score 426 bits
Score difference with first non-orthologous sequence - T.annulata:426 T.brucei:426

Q4U9P2              	100.00%		Q384A6              	100.00%
Bootstrap support for Q4U9P2 as seed ortholog is 100%.
Bootstrap support for Q384A6 as seed ortholog is 100%.

Group of orthologs #98. Best score 426 bits
Score difference with first non-orthologous sequence - T.annulata:349 T.brucei:286

Q4UAE5              	100.00%		Q38BP7              	100.00%
Bootstrap support for Q4UAE5 as seed ortholog is 100%.
Bootstrap support for Q38BP7 as seed ortholog is 100%.

Group of orthologs #99. Best score 425 bits
Score difference with first non-orthologous sequence - T.annulata:229 T.brucei:235

Q4UFS6              	100.00%		Q388N2              	100.00%
Bootstrap support for Q4UFS6 as seed ortholog is 100%.
Bootstrap support for Q388N2 as seed ortholog is 100%.

Group of orthologs #100. Best score 422 bits
Score difference with first non-orthologous sequence - T.annulata:190 T.brucei:104

Q4UDH3              	100.00%		Q383B6              	100.00%
Bootstrap support for Q4UDH3 as seed ortholog is 99%.
Bootstrap support for Q383B6 as seed ortholog is 96%.

Group of orthologs #101. Best score 422 bits
Score difference with first non-orthologous sequence - T.annulata:197 T.brucei:221

Q4UIT0              	100.00%		Q582T0              	100.00%
Bootstrap support for Q4UIT0 as seed ortholog is 98%.
Bootstrap support for Q582T0 as seed ortholog is 99%.

Group of orthologs #102. Best score 419 bits
Score difference with first non-orthologous sequence - T.annulata:370 T.brucei:137

Q4UCC5              	100.00%		Q57W25              	100.00%
                    	       		Q57W24              	31.40%
Bootstrap support for Q4UCC5 as seed ortholog is 100%.
Bootstrap support for Q57W25 as seed ortholog is 100%.

Group of orthologs #103. Best score 418 bits
Score difference with first non-orthologous sequence - T.annulata:418 T.brucei:418

Q4UBV3              	100.00%		Q38B01              	100.00%
Bootstrap support for Q4UBV3 as seed ortholog is 100%.
Bootstrap support for Q38B01 as seed ortholog is 100%.

Group of orthologs #104. Best score 417 bits
Score difference with first non-orthologous sequence - T.annulata:274 T.brucei:206

Q4U9Q4              	100.00%		Q389U3              	100.00%
Bootstrap support for Q4U9Q4 as seed ortholog is 100%.
Bootstrap support for Q389U3 as seed ortholog is 99%.

Group of orthologs #105. Best score 417 bits
Score difference with first non-orthologous sequence - T.annulata:417 T.brucei:246

Q4UHZ3              	100.00%		Q385M5              	100.00%
Bootstrap support for Q4UHZ3 as seed ortholog is 100%.
Bootstrap support for Q385M5 as seed ortholog is 99%.

Group of orthologs #106. Best score 417 bits
Score difference with first non-orthologous sequence - T.annulata:417 T.brucei:317

Q4UBI5              	100.00%		Q57ZX0              	100.00%
Bootstrap support for Q4UBI5 as seed ortholog is 100%.
Bootstrap support for Q57ZX0 as seed ortholog is 100%.

Group of orthologs #107. Best score 414 bits
Score difference with first non-orthologous sequence - T.annulata:309 T.brucei:83

Q4U925              	100.00%		Q38D21              	100.00%
Bootstrap support for Q4U925 as seed ortholog is 100%.
Bootstrap support for Q38D21 as seed ortholog is 99%.

Group of orthologs #108. Best score 413 bits
Score difference with first non-orthologous sequence - T.annulata:413 T.brucei:85

Q4UBV4              	100.00%		Q386H6              	100.00%
                    	       		Q382N5              	7.70%
Bootstrap support for Q4UBV4 as seed ortholog is 100%.
Bootstrap support for Q386H6 as seed ortholog is 85%.

Group of orthologs #109. Best score 410 bits
Score difference with first non-orthologous sequence - T.annulata:410 T.brucei:410

Q4U8G4              	100.00%		Q586G3              	100.00%
                    	       		Q586G1              	99.49%
                    	       		Q586F9              	98.99%
Bootstrap support for Q4U8G4 as seed ortholog is 100%.
Bootstrap support for Q586G3 as seed ortholog is 100%.

Group of orthologs #110. Best score 410 bits
Score difference with first non-orthologous sequence - T.annulata:116 T.brucei:105

Q4UHU0              	100.00%		Q386P5              	100.00%
Bootstrap support for Q4UHU0 as seed ortholog is 97%.
Bootstrap support for Q386P5 as seed ortholog is 97%.

Group of orthologs #111. Best score 407 bits
Score difference with first non-orthologous sequence - T.annulata:93 T.brucei:128

Q4U9B5              	100.00%		Q580H2              	100.00%
                    	       		Q38AU3              	9.16%
Bootstrap support for Q4U9B5 as seed ortholog is 96%.
Bootstrap support for Q580H2 as seed ortholog is 99%.

Group of orthologs #112. Best score 407 bits
Score difference with first non-orthologous sequence - T.annulata:14 T.brucei:5

Q4UDB0              	100.00%		Q57XV7              	100.00%
Bootstrap support for Q4UDB0 as seed ortholog is 68%.
Alternative seed ortholog is Q4UFJ2 (14 bits away from this cluster)
Bootstrap support for Q57XV7 as seed ortholog is 56%.
Alternative seed ortholog is Q382Y7 (5 bits away from this cluster)

Group of orthologs #113. Best score 404 bits
Score difference with first non-orthologous sequence - T.annulata:404 T.brucei:88

Q4U9T0              	100.00%		Q38AR9              	100.00%
Q4UFJ5              	14.96%		
Bootstrap support for Q4U9T0 as seed ortholog is 100%.
Bootstrap support for Q38AR9 as seed ortholog is 99%.

Group of orthologs #114. Best score 404 bits
Score difference with first non-orthologous sequence - T.annulata:404 T.brucei:230

Q4UGB1              	100.00%		Q587D3              	100.00%
Bootstrap support for Q4UGB1 as seed ortholog is 100%.
Bootstrap support for Q587D3 as seed ortholog is 100%.

Group of orthologs #115. Best score 401 bits
Score difference with first non-orthologous sequence - T.annulata:251 T.brucei:261

Q4UC68              	100.00%		Q38CI6              	100.00%
Bootstrap support for Q4UC68 as seed ortholog is 100%.
Bootstrap support for Q38CI6 as seed ortholog is 100%.

Group of orthologs #116. Best score 394 bits
Score difference with first non-orthologous sequence - T.annulata:394 T.brucei:394

Q4UBN2              	100.00%		Q587E4              	100.00%
Bootstrap support for Q4UBN2 as seed ortholog is 100%.
Bootstrap support for Q587E4 as seed ortholog is 100%.

Group of orthologs #117. Best score 393 bits
Score difference with first non-orthologous sequence - T.annulata:116 T.brucei:393

Q4UDK3              	100.00%		Q582R3              	100.00%
                    	       		Q582Q9              	96.19%
Bootstrap support for Q4UDK3 as seed ortholog is 98%.
Bootstrap support for Q582R3 as seed ortholog is 100%.

Group of orthologs #118. Best score 393 bits
Score difference with first non-orthologous sequence - T.annulata:106 T.brucei:28

Q4UBV5              	100.00%		Q388E8              	100.00%
Bootstrap support for Q4UBV5 as seed ortholog is 98%.
Bootstrap support for Q388E8 as seed ortholog is 74%.
Alternative seed ortholog is Q38DF6 (28 bits away from this cluster)

Group of orthologs #119. Best score 393 bits
Score difference with first non-orthologous sequence - T.annulata:200 T.brucei:286

Q4UC66              	100.00%		Q57YG5              	100.00%
Bootstrap support for Q4UC66 as seed ortholog is 99%.
Bootstrap support for Q57YG5 as seed ortholog is 99%.

Group of orthologs #120. Best score 391 bits
Score difference with first non-orthologous sequence - T.annulata:391 T.brucei:391

Q4UBG5              	100.00%		Q57TX9              	100.00%
Bootstrap support for Q4UBG5 as seed ortholog is 100%.
Bootstrap support for Q57TX9 as seed ortholog is 100%.

Group of orthologs #121. Best score 386 bits
Score difference with first non-orthologous sequence - T.annulata:386 T.brucei:386

Q4UB69              	100.00%		Q582R7              	100.00%
Bootstrap support for Q4UB69 as seed ortholog is 100%.
Bootstrap support for Q582R7 as seed ortholog is 100%.

Group of orthologs #122. Best score 379 bits
Score difference with first non-orthologous sequence - T.annulata:129 T.brucei:206

Q4UCK3              	100.00%		D6XD01              	100.00%
Bootstrap support for Q4UCK3 as seed ortholog is 99%.
Bootstrap support for D6XD01 as seed ortholog is 99%.

Group of orthologs #123. Best score 379 bits
Score difference with first non-orthologous sequence - T.annulata:379 T.brucei:379

Q4UGX0              	100.00%		Q586P1              	100.00%
Bootstrap support for Q4UGX0 as seed ortholog is 100%.
Bootstrap support for Q586P1 as seed ortholog is 100%.

Group of orthologs #124. Best score 377 bits
Score difference with first non-orthologous sequence - T.annulata:377 T.brucei:236

Q4UBH7              	100.00%		Q586U4              	100.00%
Bootstrap support for Q4UBH7 as seed ortholog is 100%.
Bootstrap support for Q586U4 as seed ortholog is 100%.

Group of orthologs #125. Best score 376 bits
Score difference with first non-orthologous sequence - T.annulata:19 T.brucei:86

Q4U9H5              	100.00%		Q38AK2              	100.00%
Bootstrap support for Q4U9H5 as seed ortholog is 70%.
Alternative seed ortholog is Q4UIW8 (19 bits away from this cluster)
Bootstrap support for Q38AK2 as seed ortholog is 97%.

Group of orthologs #126. Best score 375 bits
Score difference with first non-orthologous sequence - T.annulata:375 T.brucei:375

Q4UE24              	100.00%		Q38F32              	100.00%
Bootstrap support for Q4UE24 as seed ortholog is 100%.
Bootstrap support for Q38F32 as seed ortholog is 100%.

Group of orthologs #127. Best score 375 bits
Score difference with first non-orthologous sequence - T.annulata:375 T.brucei:375

Q4UDL6              	100.00%		Q57UT0              	100.00%
Bootstrap support for Q4UDL6 as seed ortholog is 100%.
Bootstrap support for Q57UT0 as seed ortholog is 100%.

Group of orthologs #128. Best score 375 bits
Score difference with first non-orthologous sequence - T.annulata:375 T.brucei:375

Q4U9G5              	100.00%		Q582G3              	100.00%
Bootstrap support for Q4U9G5 as seed ortholog is 100%.
Bootstrap support for Q582G3 as seed ortholog is 100%.

Group of orthologs #129. Best score 374 bits
Score difference with first non-orthologous sequence - T.annulata:178 T.brucei:141

Q4UHR0              	100.00%		Q385L1              	100.00%
Bootstrap support for Q4UHR0 as seed ortholog is 99%.
Bootstrap support for Q385L1 as seed ortholog is 99%.

Group of orthologs #130. Best score 373 bits
Score difference with first non-orthologous sequence - T.annulata:321 T.brucei:373

Q4UIV8              	100.00%		Q38AE5              	100.00%
Bootstrap support for Q4UIV8 as seed ortholog is 100%.
Bootstrap support for Q38AE5 as seed ortholog is 100%.

Group of orthologs #131. Best score 372 bits
Score difference with first non-orthologous sequence - T.annulata:372 T.brucei:372

Q4U9X6              	100.00%		Q387I8              	100.00%
Bootstrap support for Q4U9X6 as seed ortholog is 100%.
Bootstrap support for Q387I8 as seed ortholog is 100%.

Group of orthologs #132. Best score 372 bits
Score difference with first non-orthologous sequence - T.annulata:372 T.brucei:372

Q4U924              	100.00%		Q582T6              	100.00%
Bootstrap support for Q4U924 as seed ortholog is 100%.
Bootstrap support for Q582T6 as seed ortholog is 100%.

Group of orthologs #133. Best score 371 bits
Score difference with first non-orthologous sequence - T.annulata:371 T.brucei:193

Q4UIU3              	100.00%		Q38DX9              	100.00%
Bootstrap support for Q4UIU3 as seed ortholog is 100%.
Bootstrap support for Q38DX9 as seed ortholog is 100%.

Group of orthologs #134. Best score 369 bits
Score difference with first non-orthologous sequence - T.annulata:369 T.brucei:369

Q4UBJ1              	100.00%		Q38C98              	100.00%
Bootstrap support for Q4UBJ1 as seed ortholog is 100%.
Bootstrap support for Q38C98 as seed ortholog is 100%.

Group of orthologs #135. Best score 368 bits
Score difference with first non-orthologous sequence - T.annulata:368 T.brucei:368

Q4U994              	100.00%		Q584Z1              	100.00%
Bootstrap support for Q4U994 as seed ortholog is 100%.
Bootstrap support for Q584Z1 as seed ortholog is 100%.

Group of orthologs #136. Best score 367 bits
Score difference with first non-orthologous sequence - T.annulata:249 T.brucei:367

Q4UHR4              	100.00%		Q382Q1              	100.00%
                    	       		Q382Q2              	99.38%
                    	       		Q382Q3              	97.82%
                    	       		Q382Q0              	92.83%
Bootstrap support for Q4UHR4 as seed ortholog is 100%.
Bootstrap support for Q382Q1 as seed ortholog is 100%.

Group of orthologs #137. Best score 365 bits
Score difference with first non-orthologous sequence - T.annulata:54 T.brucei:365

Q4UEG2              	100.00%		Q380Z4              	100.00%
Bootstrap support for Q4UEG2 as seed ortholog is 88%.
Bootstrap support for Q380Z4 as seed ortholog is 100%.

Group of orthologs #138. Best score 364 bits
Score difference with first non-orthologous sequence - T.annulata:303 T.brucei:364

Q4UB84              	100.00%		Q388R1              	100.00%
Bootstrap support for Q4UB84 as seed ortholog is 100%.
Bootstrap support for Q388R1 as seed ortholog is 100%.

Group of orthologs #139. Best score 364 bits
Score difference with first non-orthologous sequence - T.annulata:364 T.brucei:364

Q4U8V5              	100.00%		Q57ZA2              	100.00%
Bootstrap support for Q4U8V5 as seed ortholog is 100%.
Bootstrap support for Q57ZA2 as seed ortholog is 100%.

Group of orthologs #140. Best score 364 bits
Score difference with first non-orthologous sequence - T.annulata:364 T.brucei:108

Q4UH65              	100.00%		Q580R7              	100.00%
Bootstrap support for Q4UH65 as seed ortholog is 100%.
Bootstrap support for Q580R7 as seed ortholog is 99%.

Group of orthologs #141. Best score 361 bits
Score difference with first non-orthologous sequence - T.annulata:361 T.brucei:361

Q4UF66              	100.00%		Q57TY2              	100.00%
Bootstrap support for Q4UF66 as seed ortholog is 100%.
Bootstrap support for Q57TY2 as seed ortholog is 100%.

Group of orthologs #142. Best score 359 bits
Score difference with first non-orthologous sequence - T.annulata:359 T.brucei:359

Q4UCM8              	100.00%		Q57UW4              	100.00%
Bootstrap support for Q4UCM8 as seed ortholog is 100%.
Bootstrap support for Q57UW4 as seed ortholog is 100%.

Group of orthologs #143. Best score 358 bits
Score difference with first non-orthologous sequence - T.annulata:358 T.brucei:358

Q4UDM6              	100.00%		Q382A3              	100.00%
Bootstrap support for Q4UDM6 as seed ortholog is 100%.
Bootstrap support for Q382A3 as seed ortholog is 100%.

Group of orthologs #144. Best score 356 bits
Score difference with first non-orthologous sequence - T.annulata:165 T.brucei:53

Q4UA75              	100.00%		Q384K0              	100.00%
Bootstrap support for Q4UA75 as seed ortholog is 99%.
Bootstrap support for Q384K0 as seed ortholog is 93%.

Group of orthologs #145. Best score 356 bits
Score difference with first non-orthologous sequence - T.annulata:79 T.brucei:7

Q4UED3              	100.00%		Q584A7              	100.00%
Bootstrap support for Q4UED3 as seed ortholog is 96%.
Bootstrap support for Q584A7 as seed ortholog is 53%.
Alternative seed ortholog is Q381W2 (7 bits away from this cluster)

Group of orthologs #146. Best score 355 bits
Score difference with first non-orthologous sequence - T.annulata:355 T.brucei:151

Q4UCN5              	100.00%		Q584C4              	100.00%
Bootstrap support for Q4UCN5 as seed ortholog is 100%.
Bootstrap support for Q584C4 as seed ortholog is 99%.

Group of orthologs #147. Best score 353 bits
Score difference with first non-orthologous sequence - T.annulata:241 T.brucei:113

Q4UE05              	100.00%		Q38AG0              	100.00%
Bootstrap support for Q4UE05 as seed ortholog is 100%.
Bootstrap support for Q38AG0 as seed ortholog is 99%.

Group of orthologs #148. Best score 351 bits
Score difference with first non-orthologous sequence - T.annulata:351 T.brucei:191

Q4UIE9              	100.00%		Q4FKP5              	100.00%
Bootstrap support for Q4UIE9 as seed ortholog is 100%.
Bootstrap support for Q4FKP5 as seed ortholog is 100%.

Group of orthologs #149. Best score 350 bits
Score difference with first non-orthologous sequence - T.annulata:350 T.brucei:350

Q4UBP8              	100.00%		Q57UA6              	100.00%
Bootstrap support for Q4UBP8 as seed ortholog is 100%.
Bootstrap support for Q57UA6 as seed ortholog is 100%.

Group of orthologs #150. Best score 350 bits
Score difference with first non-orthologous sequence - T.annulata:350 T.brucei:350

Q4UEQ5              	100.00%		Q38F23              	100.00%
Bootstrap support for Q4UEQ5 as seed ortholog is 100%.
Bootstrap support for Q38F23 as seed ortholog is 100%.

Group of orthologs #151. Best score 350 bits
Score difference with first non-orthologous sequence - T.annulata:350 T.brucei:24

Q4UDK4              	100.00%		Q580W5              	100.00%
Bootstrap support for Q4UDK4 as seed ortholog is 100%.
Bootstrap support for Q580W5 as seed ortholog is 67%.
Alternative seed ortholog is Q381F9 (24 bits away from this cluster)

Group of orthologs #152. Best score 348 bits
Score difference with first non-orthologous sequence - T.annulata:348 T.brucei:145

Q4U9F7              	100.00%		Q385F3              	100.00%
Bootstrap support for Q4U9F7 as seed ortholog is 100%.
Bootstrap support for Q385F3 as seed ortholog is 99%.

Group of orthologs #153. Best score 348 bits
Score difference with first non-orthologous sequence - T.annulata:348 T.brucei:296

Q4UER5              	100.00%		Q583H8              	100.00%
Bootstrap support for Q4UER5 as seed ortholog is 100%.
Bootstrap support for Q583H8 as seed ortholog is 100%.

Group of orthologs #154. Best score 347 bits
Score difference with first non-orthologous sequence - T.annulata:347 T.brucei:347

Q4UC94              	100.00%		Q4GYJ4              	100.00%
Bootstrap support for Q4UC94 as seed ortholog is 100%.
Bootstrap support for Q4GYJ4 as seed ortholog is 100%.

Group of orthologs #155. Best score 345 bits
Score difference with first non-orthologous sequence - T.annulata:345 T.brucei:345

Q4U8E7              	100.00%		Q583S0              	100.00%
Bootstrap support for Q4U8E7 as seed ortholog is 100%.
Bootstrap support for Q583S0 as seed ortholog is 100%.

Group of orthologs #156. Best score 345 bits
Score difference with first non-orthologous sequence - T.annulata:345 T.brucei:60

Q4UIV0              	100.00%		Q585L2              	100.00%
Bootstrap support for Q4UIV0 as seed ortholog is 100%.
Bootstrap support for Q585L2 as seed ortholog is 82%.

Group of orthologs #157. Best score 343 bits
Score difference with first non-orthologous sequence - T.annulata:343 T.brucei:343

Q4U964              	100.00%		Q382C5              	100.00%
Bootstrap support for Q4U964 as seed ortholog is 100%.
Bootstrap support for Q382C5 as seed ortholog is 100%.

Group of orthologs #158. Best score 339 bits
Score difference with first non-orthologous sequence - T.annulata:339 T.brucei:339

Q4UA14              	100.00%		Q582L2              	100.00%
Bootstrap support for Q4UA14 as seed ortholog is 100%.
Bootstrap support for Q582L2 as seed ortholog is 100%.

Group of orthologs #159. Best score 337 bits
Score difference with first non-orthologous sequence - T.annulata:245 T.brucei:337

Q4UIP3              	100.00%		Q57W56              	100.00%
Bootstrap support for Q4UIP3 as seed ortholog is 100%.
Bootstrap support for Q57W56 as seed ortholog is 100%.

Group of orthologs #160. Best score 336 bits
Score difference with first non-orthologous sequence - T.annulata:336 T.brucei:336

Q4U8I0              	100.00%		Q386S3              	100.00%
Bootstrap support for Q4U8I0 as seed ortholog is 100%.
Bootstrap support for Q386S3 as seed ortholog is 100%.

Group of orthologs #161. Best score 335 bits
Score difference with first non-orthologous sequence - T.annulata:335 T.brucei:335

Q4UIF9              	100.00%		Q4GZE6              	100.00%
                    	       		Q4GZG3              	50.15%
                    	       		Q4GZG4              	50.00%
Bootstrap support for Q4UIF9 as seed ortholog is 100%.
Bootstrap support for Q4GZE6 as seed ortholog is 100%.

Group of orthologs #162. Best score 334 bits
Score difference with first non-orthologous sequence - T.annulata:208 T.brucei:334

Q4UCK4              	100.00%		Q384V4              	100.00%
Bootstrap support for Q4UCK4 as seed ortholog is 100%.
Bootstrap support for Q384V4 as seed ortholog is 100%.

Group of orthologs #163. Best score 334 bits
Score difference with first non-orthologous sequence - T.annulata:334 T.brucei:334

Q4U8W2              	100.00%		Q57VD3              	100.00%
Bootstrap support for Q4U8W2 as seed ortholog is 100%.
Bootstrap support for Q57VD3 as seed ortholog is 100%.

Group of orthologs #164. Best score 333 bits
Score difference with first non-orthologous sequence - T.annulata:333 T.brucei:333

Q4UF22              	100.00%		Q388Q5              	100.00%
Bootstrap support for Q4UF22 as seed ortholog is 100%.
Bootstrap support for Q388Q5 as seed ortholog is 100%.

Group of orthologs #165. Best score 332 bits
Score difference with first non-orthologous sequence - T.annulata:332 T.brucei:332

Q4U8L6              	100.00%		Q586Q7              	100.00%
Bootstrap support for Q4U8L6 as seed ortholog is 100%.
Bootstrap support for Q586Q7 as seed ortholog is 100%.

Group of orthologs #166. Best score 332 bits
Score difference with first non-orthologous sequence - T.annulata:201 T.brucei:176

Q4UHP8              	100.00%		Q57YC8              	100.00%
Bootstrap support for Q4UHP8 as seed ortholog is 100%.
Bootstrap support for Q57YC8 as seed ortholog is 99%.

Group of orthologs #167. Best score 331 bits
Score difference with first non-orthologous sequence - T.annulata:331 T.brucei:331

Q4UAY2              	100.00%		Q38AJ3              	100.00%
Bootstrap support for Q4UAY2 as seed ortholog is 100%.
Bootstrap support for Q38AJ3 as seed ortholog is 100%.

Group of orthologs #168. Best score 330 bits
Score difference with first non-orthologous sequence - T.annulata:262 T.brucei:228

Q4UA19              	100.00%		Q383E1              	100.00%
Bootstrap support for Q4UA19 as seed ortholog is 100%.
Bootstrap support for Q383E1 as seed ortholog is 100%.

Group of orthologs #169. Best score 329 bits
Score difference with first non-orthologous sequence - T.annulata:329 T.brucei:329

Q4UF80              	100.00%		Q38DF2              	100.00%
                    	       		Q38DF3              	100.00%
                    	       		Q38DE9              	99.58%
                    	       		Q38DF0              	99.29%
Bootstrap support for Q4UF80 as seed ortholog is 100%.
Bootstrap support for Q38DF2 as seed ortholog is 100%.
Bootstrap support for Q38DF3 as seed ortholog is 100%.

Group of orthologs #170. Best score 329 bits
Score difference with first non-orthologous sequence - T.annulata:128 T.brucei:109

Q4UF83              	100.00%		Q38AX7              	100.00%
Bootstrap support for Q4UF83 as seed ortholog is 99%.
Bootstrap support for Q38AX7 as seed ortholog is 99%.

Group of orthologs #171. Best score 326 bits
Score difference with first non-orthologous sequence - T.annulata:326 T.brucei:326

Q4UB92              	100.00%		Q383X7              	100.00%
Bootstrap support for Q4UB92 as seed ortholog is 100%.
Bootstrap support for Q383X7 as seed ortholog is 100%.

Group of orthologs #172. Best score 325 bits
Score difference with first non-orthologous sequence - T.annulata:325 T.brucei:325

Q4U926              	100.00%		Q57ZF2              	100.00%
Bootstrap support for Q4U926 as seed ortholog is 100%.
Bootstrap support for Q57ZF2 as seed ortholog is 100%.

Group of orthologs #173. Best score 324 bits
Score difference with first non-orthologous sequence - T.annulata:324 T.brucei:166

Q4UCK8              	100.00%		Q381B3              	100.00%
Bootstrap support for Q4UCK8 as seed ortholog is 100%.
Bootstrap support for Q381B3 as seed ortholog is 99%.

Group of orthologs #174. Best score 322 bits
Score difference with first non-orthologous sequence - T.annulata:72 T.brucei:322

Q4UAM8              	100.00%		Q382V6              	100.00%
Bootstrap support for Q4UAM8 as seed ortholog is 90%.
Bootstrap support for Q382V6 as seed ortholog is 100%.

Group of orthologs #175. Best score 322 bits
Score difference with first non-orthologous sequence - T.annulata:322 T.brucei:322

Q4UHP5              	100.00%		Q580S3              	100.00%
Bootstrap support for Q4UHP5 as seed ortholog is 100%.
Bootstrap support for Q580S3 as seed ortholog is 100%.

Group of orthologs #176. Best score 321 bits
Score difference with first non-orthologous sequence - T.annulata:246 T.brucei:237

Q4UBU0              	100.00%		Q585M3              	100.00%
                    	       		Q38CB4              	7.38%
Bootstrap support for Q4UBU0 as seed ortholog is 100%.
Bootstrap support for Q585M3 as seed ortholog is 100%.

Group of orthologs #177. Best score 321 bits
Score difference with first non-orthologous sequence - T.annulata:321 T.brucei:321

Q4UEC8              	100.00%		Q383U0              	100.00%
Bootstrap support for Q4UEC8 as seed ortholog is 100%.
Bootstrap support for Q383U0 as seed ortholog is 100%.

Group of orthologs #178. Best score 320 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:320

Q4UAM2              	100.00%		Q4FKC0              	100.00%
Bootstrap support for Q4UAM2 as seed ortholog is 99%.
Bootstrap support for Q4FKC0 as seed ortholog is 100%.

Group of orthologs #179. Best score 317 bits
Score difference with first non-orthologous sequence - T.annulata:66 T.brucei:173

Q4U971              	100.00%		Q57Z97              	100.00%
Bootstrap support for Q4U971 as seed ortholog is 91%.
Bootstrap support for Q57Z97 as seed ortholog is 86%.

Group of orthologs #180. Best score 316 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:7

Q26671              	100.00%		Q38BA2              	100.00%
                    	       		Q57TX3              	8.28%
Bootstrap support for Q26671 as seed ortholog is 99%.
Bootstrap support for Q38BA2 as seed ortholog is 59%.
Alternative seed ortholog is Q38CD3 (7 bits away from this cluster)

Group of orthologs #181. Best score 316 bits
Score difference with first non-orthologous sequence - T.annulata:316 T.brucei:39

Q4U999              	100.00%		Q38DU7              	100.00%
Bootstrap support for Q4U999 as seed ortholog is 100%.
Bootstrap support for Q38DU7 as seed ortholog is 88%.

Group of orthologs #182. Best score 313 bits
Score difference with first non-orthologous sequence - T.annulata:313 T.brucei:313

Q4UC08              	100.00%		Q383X4              	100.00%
Bootstrap support for Q4UC08 as seed ortholog is 100%.
Bootstrap support for Q383X4 as seed ortholog is 100%.

Group of orthologs #183. Best score 313 bits
Score difference with first non-orthologous sequence - T.annulata:313 T.brucei:313

Q4UCZ7              	100.00%		Q585F2              	100.00%
Bootstrap support for Q4UCZ7 as seed ortholog is 100%.
Bootstrap support for Q585F2 as seed ortholog is 100%.

Group of orthologs #184. Best score 312 bits
Score difference with first non-orthologous sequence - T.annulata:312 T.brucei:312

Q4U8Q0              	100.00%		Q38AL4              	100.00%
                    	       		Q388C9              	21.69%
Bootstrap support for Q4U8Q0 as seed ortholog is 100%.
Bootstrap support for Q38AL4 as seed ortholog is 100%.

Group of orthologs #185. Best score 310 bits
Score difference with first non-orthologous sequence - T.annulata:310 T.brucei:310

Q4UBW3              	100.00%		Q382N0              	100.00%
Bootstrap support for Q4UBW3 as seed ortholog is 100%.
Bootstrap support for Q382N0 as seed ortholog is 100%.

Group of orthologs #186. Best score 309 bits
Score difference with first non-orthologous sequence - T.annulata:309 T.brucei:309

Q4UIZ5              	100.00%		Q57V45              	100.00%
Bootstrap support for Q4UIZ5 as seed ortholog is 100%.
Bootstrap support for Q57V45 as seed ortholog is 100%.

Group of orthologs #187. Best score 309 bits
Score difference with first non-orthologous sequence - T.annulata:309 T.brucei:309

Q4UHT6              	100.00%		Q580Z5              	100.00%
Bootstrap support for Q4UHT6 as seed ortholog is 100%.
Bootstrap support for Q580Z5 as seed ortholog is 100%.

Group of orthologs #188. Best score 306 bits
Score difference with first non-orthologous sequence - T.annulata:306 T.brucei:201

Q4UB62              	100.00%		Q384S7              	100.00%
Bootstrap support for Q4UB62 as seed ortholog is 100%.
Bootstrap support for Q384S7 as seed ortholog is 99%.

Group of orthologs #189. Best score 304 bits
Score difference with first non-orthologous sequence - T.annulata:304 T.brucei:304

Q4UIR6              	100.00%		Q583M1              	100.00%
Bootstrap support for Q4UIR6 as seed ortholog is 100%.
Bootstrap support for Q583M1 as seed ortholog is 100%.

Group of orthologs #190. Best score 302 bits
Score difference with first non-orthologous sequence - T.annulata:302 T.brucei:302

Q4UCR8              	100.00%		Q383X0              	100.00%
Bootstrap support for Q4UCR8 as seed ortholog is 100%.
Bootstrap support for Q383X0 as seed ortholog is 100%.

Group of orthologs #191. Best score 300 bits
Score difference with first non-orthologous sequence - T.annulata:300 T.brucei:300

Q4UG78              	100.00%		Q38F53              	100.00%
Bootstrap support for Q4UG78 as seed ortholog is 100%.
Bootstrap support for Q38F53 as seed ortholog is 100%.

Group of orthologs #192. Best score 298 bits
Score difference with first non-orthologous sequence - T.annulata:189 T.brucei:68

Q4UID9              	100.00%		Q38E63              	100.00%
Bootstrap support for Q4UID9 as seed ortholog is 100%.
Bootstrap support for Q38E63 as seed ortholog is 77%.

Group of orthologs #193. Best score 298 bits
Score difference with first non-orthologous sequence - T.annulata:298 T.brucei:298

Q4UE66              	100.00%		Q580K8              	100.00%
Bootstrap support for Q4UE66 as seed ortholog is 100%.
Bootstrap support for Q580K8 as seed ortholog is 100%.

Group of orthologs #194. Best score 297 bits
Score difference with first non-orthologous sequence - T.annulata:297 T.brucei:297

Q4UDP8              	100.00%		Q581U8              	100.00%
Bootstrap support for Q4UDP8 as seed ortholog is 100%.
Bootstrap support for Q581U8 as seed ortholog is 100%.

Group of orthologs #195. Best score 294 bits
Score difference with first non-orthologous sequence - T.annulata:294 T.brucei:294

Q4UE34              	100.00%		Q38B73              	100.00%
Bootstrap support for Q4UE34 as seed ortholog is 100%.
Bootstrap support for Q38B73 as seed ortholog is 100%.

Group of orthologs #196. Best score 294 bits
Score difference with first non-orthologous sequence - T.annulata:294 T.brucei:294

Q4UDF6              	100.00%		Q38EC5              	100.00%
Bootstrap support for Q4UDF6 as seed ortholog is 100%.
Bootstrap support for Q38EC5 as seed ortholog is 100%.

Group of orthologs #197. Best score 293 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:93

Q4U8R0              	100.00%		Q57ZK3              	100.00%
Bootstrap support for Q4U8R0 as seed ortholog is 86%.
Bootstrap support for Q57ZK3 as seed ortholog is 92%.

Group of orthologs #198. Best score 292 bits
Score difference with first non-orthologous sequence - T.annulata:292 T.brucei:292

Q4U8T4              	100.00%		Q585S5              	100.00%
Bootstrap support for Q4U8T4 as seed ortholog is 100%.
Bootstrap support for Q585S5 as seed ortholog is 100%.

Group of orthologs #199. Best score 289 bits
Score difference with first non-orthologous sequence - T.annulata:189 T.brucei:183

Q4UDK1              	100.00%		Q388C4              	100.00%
Bootstrap support for Q4UDK1 as seed ortholog is 100%.
Bootstrap support for Q388C4 as seed ortholog is 99%.

Group of orthologs #200. Best score 289 bits
Score difference with first non-orthologous sequence - T.annulata:289 T.brucei:289

Q4UG57              	100.00%		Q38B42              	100.00%
Bootstrap support for Q4UG57 as seed ortholog is 100%.
Bootstrap support for Q38B42 as seed ortholog is 100%.

Group of orthologs #201. Best score 289 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:47

Q4UH54              	100.00%		Q586W7              	100.00%
Bootstrap support for Q4UH54 as seed ortholog is 84%.
Bootstrap support for Q586W7 as seed ortholog is 93%.

Group of orthologs #202. Best score 288 bits
Score difference with first non-orthologous sequence - T.annulata:288 T.brucei:288

Q4U977              	100.00%		Q388I8              	100.00%
Bootstrap support for Q4U977 as seed ortholog is 100%.
Bootstrap support for Q388I8 as seed ortholog is 100%.

Group of orthologs #203. Best score 288 bits
Score difference with first non-orthologous sequence - T.annulata:288 T.brucei:288

Q4UDE7              	100.00%		Q38CY8              	100.00%
Bootstrap support for Q4UDE7 as seed ortholog is 100%.
Bootstrap support for Q38CY8 as seed ortholog is 100%.

Group of orthologs #204. Best score 288 bits
Score difference with first non-orthologous sequence - T.annulata:288 T.brucei:141

Q4UH10              	100.00%		Q389N7              	100.00%
Bootstrap support for Q4UH10 as seed ortholog is 100%.
Bootstrap support for Q389N7 as seed ortholog is 99%.

Group of orthologs #205. Best score 288 bits
Score difference with first non-orthologous sequence - T.annulata:288 T.brucei:288

Q4UHL1              	100.00%		Q38AM2              	100.00%
Bootstrap support for Q4UHL1 as seed ortholog is 100%.
Bootstrap support for Q38AM2 as seed ortholog is 100%.

Group of orthologs #206. Best score 288 bits
Score difference with first non-orthologous sequence - T.annulata:288 T.brucei:218

Q4U8K0              	100.00%		Q583Q0              	100.00%
Bootstrap support for Q4U8K0 as seed ortholog is 100%.
Bootstrap support for Q583Q0 as seed ortholog is 100%.

Group of orthologs #207. Best score 286 bits
Score difference with first non-orthologous sequence - T.annulata:286 T.brucei:286

Q4UDC2              	100.00%		Q388H8              	100.00%
Bootstrap support for Q4UDC2 as seed ortholog is 100%.
Bootstrap support for Q388H8 as seed ortholog is 100%.

Group of orthologs #208. Best score 285 bits
Score difference with first non-orthologous sequence - T.annulata:214 T.brucei:160

Q4U918              	100.00%		Q389W0              	100.00%
Bootstrap support for Q4U918 as seed ortholog is 100%.
Bootstrap support for Q389W0 as seed ortholog is 99%.

Group of orthologs #209. Best score 285 bits
Score difference with first non-orthologous sequence - T.annulata:285 T.brucei:285

Q4UFV1              	100.00%		Q388D3              	100.00%
Bootstrap support for Q4UFV1 as seed ortholog is 100%.
Bootstrap support for Q388D3 as seed ortholog is 100%.

Group of orthologs #210. Best score 282 bits
Score difference with first non-orthologous sequence - T.annulata:282 T.brucei:143

Q4UDA7              	100.00%		Q38C74              	100.00%
Bootstrap support for Q4UDA7 as seed ortholog is 100%.
Bootstrap support for Q38C74 as seed ortholog is 99%.

Group of orthologs #211. Best score 282 bits
Score difference with first non-orthologous sequence - T.annulata:282 T.brucei:282

Q4UED6              	100.00%		Q38EW4              	100.00%
Bootstrap support for Q4UED6 as seed ortholog is 100%.
Bootstrap support for Q38EW4 as seed ortholog is 100%.

Group of orthologs #212. Best score 282 bits
Score difference with first non-orthologous sequence - T.annulata:208 T.brucei:186

Q4UHU4              	100.00%		Q57WZ3              	100.00%
Bootstrap support for Q4UHU4 as seed ortholog is 100%.
Bootstrap support for Q57WZ3 as seed ortholog is 100%.

Group of orthologs #213. Best score 281 bits
Score difference with first non-orthologous sequence - T.annulata:90 T.brucei:178

Q4UAK1              	100.00%		Q383K6              	100.00%
Bootstrap support for Q4UAK1 as seed ortholog is 94%.
Bootstrap support for Q383K6 as seed ortholog is 99%.

Group of orthologs #214. Best score 281 bits
Score difference with first non-orthologous sequence - T.annulata:145 T.brucei:77

Q4UD13              	100.00%		Q388M1              	100.00%
Bootstrap support for Q4UD13 as seed ortholog is 99%.
Bootstrap support for Q388M1 as seed ortholog is 94%.

Group of orthologs #215. Best score 281 bits
Score difference with first non-orthologous sequence - T.annulata:195 T.brucei:159

Q4UGM4              	100.00%		Q38DK9              	100.00%
Bootstrap support for Q4UGM4 as seed ortholog is 99%.
Bootstrap support for Q38DK9 as seed ortholog is 86%.

Group of orthologs #216. Best score 279 bits
Score difference with first non-orthologous sequence - T.annulata:279 T.brucei:155

Q4U8X2              	100.00%		Q38CH4              	100.00%
Bootstrap support for Q4U8X2 as seed ortholog is 100%.
Bootstrap support for Q38CH4 as seed ortholog is 99%.

Group of orthologs #217. Best score 277 bits
Score difference with first non-orthologous sequence - T.annulata:277 T.brucei:156

Q4UIN6              	100.00%		Q38BU9              	100.00%
Bootstrap support for Q4UIN6 as seed ortholog is 100%.
Bootstrap support for Q38BU9 as seed ortholog is 99%.

Group of orthologs #218. Best score 275 bits
Score difference with first non-orthologous sequence - T.annulata:106 T.brucei:71

Q4UI11              	100.00%		Q57WU5              	100.00%
Bootstrap support for Q4UI11 as seed ortholog is 99%.
Bootstrap support for Q57WU5 as seed ortholog is 97%.

Group of orthologs #219. Best score 274 bits
Score difference with first non-orthologous sequence - T.annulata:274 T.brucei:138

Q4UGK1              	100.00%		Q383B2              	100.00%
Bootstrap support for Q4UGK1 as seed ortholog is 100%.
Bootstrap support for Q383B2 as seed ortholog is 99%.

Group of orthologs #220. Best score 274 bits
Score difference with first non-orthologous sequence - T.annulata:214 T.brucei:274

Q4UFP0              	100.00%		Q57WW6              	100.00%
Bootstrap support for Q4UFP0 as seed ortholog is 100%.
Bootstrap support for Q57WW6 as seed ortholog is 100%.

Group of orthologs #221. Best score 272 bits
Score difference with first non-orthologous sequence - T.annulata:13 T.brucei:86

Q4UF82              	100.00%		Q38DR5              	100.00%
                    	       		Q38DS1              	89.86%
                    	       		Q388U5              	36.79%
Bootstrap support for Q4UF82 as seed ortholog is 61%.
Alternative seed ortholog is Q4UE84 (13 bits away from this cluster)
Bootstrap support for Q38DR5 as seed ortholog is 98%.

Group of orthologs #222. Best score 272 bits
Score difference with first non-orthologous sequence - T.annulata:272 T.brucei:272

Q4UEZ4              	100.00%		Q581X7              	100.00%
Bootstrap support for Q4UEZ4 as seed ortholog is 100%.
Bootstrap support for Q581X7 as seed ortholog is 100%.

Group of orthologs #223. Best score 270 bits
Score difference with first non-orthologous sequence - T.annulata:111 T.brucei:76

Q4U943              	100.00%		Q586G9              	100.00%
Bootstrap support for Q4U943 as seed ortholog is 97%.
Bootstrap support for Q586G9 as seed ortholog is 88%.

Group of orthologs #224. Best score 269 bits
Score difference with first non-orthologous sequence - T.annulata:269 T.brucei:269

Q4U9I1              	100.00%		Q388S0              	100.00%
Bootstrap support for Q4U9I1 as seed ortholog is 100%.
Bootstrap support for Q388S0 as seed ortholog is 100%.

Group of orthologs #225. Best score 269 bits
Score difference with first non-orthologous sequence - T.annulata:269 T.brucei:194

Q4UDQ1              	100.00%		Q38BU2              	100.00%
Bootstrap support for Q4UDQ1 as seed ortholog is 100%.
Bootstrap support for Q38BU2 as seed ortholog is 100%.

Group of orthologs #226. Best score 268 bits
Score difference with first non-orthologous sequence - T.annulata:268 T.brucei:268

Q4UI67              	100.00%		Q38AZ8              	100.00%
Bootstrap support for Q4UI67 as seed ortholog is 100%.
Bootstrap support for Q38AZ8 as seed ortholog is 100%.

Group of orthologs #227. Best score 267 bits
Score difference with first non-orthologous sequence - T.annulata:267 T.brucei:14

Q4UF42              	100.00%		Q386I3              	100.00%
                    	       		Q38FG7              	15.99%
Bootstrap support for Q4UF42 as seed ortholog is 100%.
Bootstrap support for Q386I3 as seed ortholog is 62%.
Alternative seed ortholog is Q385N8 (14 bits away from this cluster)

Group of orthologs #228. Best score 264 bits
Score difference with first non-orthologous sequence - T.annulata:264 T.brucei:264

Q4U9T3              	100.00%		Q38DH5              	100.00%
Bootstrap support for Q4U9T3 as seed ortholog is 100%.
Bootstrap support for Q38DH5 as seed ortholog is 100%.

Group of orthologs #229. Best score 264 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:32

Q4UGU0              	100.00%		Q389D8              	100.00%
Bootstrap support for Q4UGU0 as seed ortholog is 97%.
Bootstrap support for Q389D8 as seed ortholog is 80%.

Group of orthologs #230. Best score 263 bits
Score difference with first non-orthologous sequence - T.annulata:85 T.brucei:65

Q4UHP2              	100.00%		Q38C15              	100.00%
                    	       		Q585V4              	16.33%
Bootstrap support for Q4UHP2 as seed ortholog is 97%.
Bootstrap support for Q38C15 as seed ortholog is 96%.

Group of orthologs #231. Best score 261 bits
Score difference with first non-orthologous sequence - T.annulata:261 T.brucei:261

Q4UGD4              	100.00%		Q38AW5              	100.00%
Bootstrap support for Q4UGD4 as seed ortholog is 100%.
Bootstrap support for Q38AW5 as seed ortholog is 100%.

Group of orthologs #232. Best score 258 bits
Score difference with first non-orthologous sequence - T.annulata:258 T.brucei:258

Q4UBJ6              	100.00%		Q384Z1              	100.00%
Bootstrap support for Q4UBJ6 as seed ortholog is 100%.
Bootstrap support for Q384Z1 as seed ortholog is 100%.

Group of orthologs #233. Best score 258 bits
Score difference with first non-orthologous sequence - T.annulata:258 T.brucei:258

Q4UES5              	100.00%		Q582N2              	100.00%
Bootstrap support for Q4UES5 as seed ortholog is 100%.
Bootstrap support for Q582N2 as seed ortholog is 100%.

Group of orthologs #234. Best score 257 bits
Score difference with first non-orthologous sequence - T.annulata:257 T.brucei:257

Q4UAU2              	100.00%		Q385D9              	100.00%
Bootstrap support for Q4UAU2 as seed ortholog is 100%.
Bootstrap support for Q385D9 as seed ortholog is 100%.

Group of orthologs #235. Best score 257 bits
Score difference with first non-orthologous sequence - T.annulata:137 T.brucei:116

Q4UF72              	100.00%		Q382N3              	100.00%
Bootstrap support for Q4UF72 as seed ortholog is 100%.
Bootstrap support for Q382N3 as seed ortholog is 100%.

Group of orthologs #236. Best score 255 bits
Score difference with first non-orthologous sequence - T.annulata:98 T.brucei:85

Q4UE33              	100.00%		Q389T9              	100.00%
Bootstrap support for Q4UE33 as seed ortholog is 98%.
Bootstrap support for Q389T9 as seed ortholog is 98%.

Group of orthologs #237. Best score 253 bits
Score difference with first non-orthologous sequence - T.annulata:253 T.brucei:253

Q4UCF8              	100.00%		Q387N2              	100.00%
Bootstrap support for Q4UCF8 as seed ortholog is 100%.
Bootstrap support for Q387N2 as seed ortholog is 100%.

Group of orthologs #238. Best score 253 bits
Score difference with first non-orthologous sequence - T.annulata:80 T.brucei:73

Q4U8S0              	100.00%		Q57VA7              	100.00%
Bootstrap support for Q4U8S0 as seed ortholog is 95%.
Bootstrap support for Q57VA7 as seed ortholog is 96%.

Group of orthologs #239. Best score 252 bits
Score difference with first non-orthologous sequence - T.annulata:208 T.brucei:46

Q4UDU9              	100.00%		Q38D64              	100.00%
                    	       		Q38D65              	98.28%
Bootstrap support for Q4UDU9 as seed ortholog is 100%.
Bootstrap support for Q38D64 as seed ortholog is 97%.

Group of orthologs #240. Best score 250 bits
Score difference with first non-orthologous sequence - T.annulata:250 T.brucei:250

Q4UFD2              	100.00%		Q38AA3              	100.00%
Bootstrap support for Q4UFD2 as seed ortholog is 100%.
Bootstrap support for Q38AA3 as seed ortholog is 100%.

Group of orthologs #241. Best score 250 bits
Score difference with first non-orthologous sequence - T.annulata:250 T.brucei:111

Q4UDF2              	100.00%		Q4GYA9              	100.00%
Bootstrap support for Q4UDF2 as seed ortholog is 100%.
Bootstrap support for Q4GYA9 as seed ortholog is 99%.

Group of orthologs #242. Best score 250 bits
Score difference with first non-orthologous sequence - T.annulata:250 T.brucei:250

Q4U9K4              	100.00%		Q582G0              	100.00%
Bootstrap support for Q4U9K4 as seed ortholog is 100%.
Bootstrap support for Q582G0 as seed ortholog is 100%.

Group of orthologs #243. Best score 250 bits
Score difference with first non-orthologous sequence - T.annulata:250 T.brucei:250

Q4UI09              	100.00%		Q580E2              	100.00%
Bootstrap support for Q4UI09 as seed ortholog is 100%.
Bootstrap support for Q580E2 as seed ortholog is 100%.

Group of orthologs #244. Best score 249 bits
Score difference with first non-orthologous sequence - T.annulata:249 T.brucei:249

Q4U904              	100.00%		Q386F2              	100.00%
Bootstrap support for Q4U904 as seed ortholog is 100%.
Bootstrap support for Q386F2 as seed ortholog is 100%.

Group of orthologs #245. Best score 249 bits
Score difference with first non-orthologous sequence - T.annulata:249 T.brucei:249

Q4UI16              	100.00%		Q57VU3              	100.00%
Bootstrap support for Q4UI16 as seed ortholog is 100%.
Bootstrap support for Q57VU3 as seed ortholog is 100%.

Group of orthologs #246. Best score 248 bits
Score difference with first non-orthologous sequence - T.annulata:248 T.brucei:248

Q4UEY7              	100.00%		Q587A1              	100.00%
Bootstrap support for Q4UEY7 as seed ortholog is 100%.
Bootstrap support for Q587A1 as seed ortholog is 100%.

Group of orthologs #247. Best score 247 bits
Score difference with first non-orthologous sequence - T.annulata:247 T.brucei:247

Q4UHB7              	100.00%		Q38CL5              	100.00%
Bootstrap support for Q4UHB7 as seed ortholog is 100%.
Bootstrap support for Q38CL5 as seed ortholog is 100%.

Group of orthologs #248. Best score 247 bits
Score difference with first non-orthologous sequence - T.annulata:247 T.brucei:247

Q4UCQ8              	100.00%		Q581U7              	100.00%
Bootstrap support for Q4UCQ8 as seed ortholog is 100%.
Bootstrap support for Q581U7 as seed ortholog is 100%.

Group of orthologs #249. Best score 246 bits
Score difference with first non-orthologous sequence - T.annulata:246 T.brucei:246

Q4U9P5              	100.00%		Q389I7              	100.00%
                    	       		Q38EW1              	100.00%
Bootstrap support for Q4U9P5 as seed ortholog is 100%.
Bootstrap support for Q389I7 as seed ortholog is 100%.
Bootstrap support for Q38EW1 as seed ortholog is 100%.

Group of orthologs #250. Best score 245 bits
Score difference with first non-orthologous sequence - T.annulata:245 T.brucei:245

Q4UB33              	100.00%		Q38CY7              	100.00%
                    	       		Q586H6              	81.78%
Bootstrap support for Q4UB33 as seed ortholog is 100%.
Bootstrap support for Q38CY7 as seed ortholog is 100%.

Group of orthologs #251. Best score 245 bits
Score difference with first non-orthologous sequence - T.annulata:245 T.brucei:245

Q4U8L9              	100.00%		Q384W9              	100.00%
Bootstrap support for Q4U8L9 as seed ortholog is 100%.
Bootstrap support for Q384W9 as seed ortholog is 100%.

Group of orthologs #252. Best score 245 bits
Score difference with first non-orthologous sequence - T.annulata:245 T.brucei:245

Q4U8M0              	100.00%		Q57X58              	100.00%
Bootstrap support for Q4U8M0 as seed ortholog is 100%.
Bootstrap support for Q57X58 as seed ortholog is 100%.

Group of orthologs #253. Best score 245 bits
Score difference with first non-orthologous sequence - T.annulata:245 T.brucei:245

Q4U9Z4              	100.00%		Q580R3              	100.00%
Bootstrap support for Q4U9Z4 as seed ortholog is 100%.
Bootstrap support for Q580R3 as seed ortholog is 100%.

Group of orthologs #254. Best score 243 bits
Score difference with first non-orthologous sequence - T.annulata:243 T.brucei:243

Q4U8U5              	100.00%		Q383I8              	100.00%
                    	       		Q383K0              	100.00%
Bootstrap support for Q4U8U5 as seed ortholog is 100%.
Bootstrap support for Q383I8 as seed ortholog is 100%.
Bootstrap support for Q383K0 as seed ortholog is 100%.

Group of orthologs #255. Best score 243 bits
Score difference with first non-orthologous sequence - T.annulata:152 T.brucei:137

Q4UA22              	100.00%		Q57YK0              	100.00%
Bootstrap support for Q4UA22 as seed ortholog is 99%.
Bootstrap support for Q57YK0 as seed ortholog is 99%.

Group of orthologs #256. Best score 242 bits
Score difference with first non-orthologous sequence - T.annulata:242 T.brucei:242

Q4UAZ2              	100.00%		Q38CK9              	100.00%
Bootstrap support for Q4UAZ2 as seed ortholog is 100%.
Bootstrap support for Q38CK9 as seed ortholog is 100%.

Group of orthologs #257. Best score 242 bits
Score difference with first non-orthologous sequence - T.annulata:242 T.brucei:242

Q4UG02              	100.00%		Q583Q6              	100.00%
Bootstrap support for Q4UG02 as seed ortholog is 100%.
Bootstrap support for Q583Q6 as seed ortholog is 100%.

Group of orthologs #258. Best score 239 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:239

Q4UCT9              	100.00%		Q38C91              	100.00%
Bootstrap support for Q4UCT9 as seed ortholog is 81%.
Bootstrap support for Q38C91 as seed ortholog is 100%.

Group of orthologs #259. Best score 239 bits
Score difference with first non-orthologous sequence - T.annulata:239 T.brucei:239

Q4UG25              	100.00%		Q389Y6              	100.00%
Bootstrap support for Q4UG25 as seed ortholog is 100%.
Bootstrap support for Q389Y6 as seed ortholog is 100%.

Group of orthologs #260. Best score 238 bits
Score difference with first non-orthologous sequence - T.annulata:238 T.brucei:238

Q4UA11              	100.00%		Q382Z1              	100.00%
Bootstrap support for Q4UA11 as seed ortholog is 100%.
Bootstrap support for Q382Z1 as seed ortholog is 100%.

Group of orthologs #261. Best score 238 bits
Score difference with first non-orthologous sequence - T.annulata:238 T.brucei:238

Q4UC35              	100.00%		Q57UX1              	100.00%
Bootstrap support for Q4UC35 as seed ortholog is 100%.
Bootstrap support for Q57UX1 as seed ortholog is 100%.

Group of orthologs #262. Best score 237 bits
Score difference with first non-orthologous sequence - T.annulata:237 T.brucei:237

Q4UGD7              	100.00%		Q4FKP3              	100.00%
Bootstrap support for Q4UGD7 as seed ortholog is 100%.
Bootstrap support for Q4FKP3 as seed ortholog is 100%.

Group of orthologs #263. Best score 236 bits
Score difference with first non-orthologous sequence - T.annulata:112 T.brucei:73

Q4UI69              	100.00%		Q381R1              	100.00%
Bootstrap support for Q4UI69 as seed ortholog is 99%.
Bootstrap support for Q381R1 as seed ortholog is 99%.

Group of orthologs #264. Best score 235 bits
Score difference with first non-orthologous sequence - T.annulata:235 T.brucei:82

Q4UF43              	100.00%		Q385F9              	100.00%
Bootstrap support for Q4UF43 as seed ortholog is 100%.
Bootstrap support for Q385F9 as seed ortholog is 98%.

Group of orthologs #265. Best score 234 bits
Score difference with first non-orthologous sequence - T.annulata:234 T.brucei:234

Q4UGT4              	100.00%		Q38EI9              	100.00%
Bootstrap support for Q4UGT4 as seed ortholog is 100%.
Bootstrap support for Q38EI9 as seed ortholog is 100%.

Group of orthologs #266. Best score 233 bits
Score difference with first non-orthologous sequence - T.annulata:168 T.brucei:233

Q4UGH2              	100.00%		Q38DQ1              	100.00%
Bootstrap support for Q4UGH2 as seed ortholog is 100%.
Bootstrap support for Q38DQ1 as seed ortholog is 100%.

Group of orthologs #267. Best score 231 bits
Score difference with first non-orthologous sequence - T.annulata:77 T.brucei:29

Q4UGI5              	100.00%		Q387G2              	100.00%
                    	       		Q585R7              	22.14%
                    	       		Q585R9              	22.14%
                    	       		Q581Y2              	5.71%
Bootstrap support for Q4UGI5 as seed ortholog is 99%.
Bootstrap support for Q387G2 as seed ortholog is 85%.

Group of orthologs #268. Best score 228 bits
Score difference with first non-orthologous sequence - T.annulata:144 T.brucei:64

Q4U8H4              	100.00%		Q38CK3              	100.00%
                    	       		Q57UD5              	15.02%
Bootstrap support for Q4U8H4 as seed ortholog is 99%.
Bootstrap support for Q38CK3 as seed ortholog is 96%.

Group of orthologs #269. Best score 228 bits
Score difference with first non-orthologous sequence - T.annulata:228 T.brucei:228

Q4UBM4              	100.00%		Q38BZ6              	100.00%
Bootstrap support for Q4UBM4 as seed ortholog is 100%.
Bootstrap support for Q38BZ6 as seed ortholog is 100%.

Group of orthologs #270. Best score 228 bits
Score difference with first non-orthologous sequence - T.annulata:228 T.brucei:228

Q4UIQ4              	100.00%		Q38AG5              	100.00%
Bootstrap support for Q4UIQ4 as seed ortholog is 100%.
Bootstrap support for Q38AG5 as seed ortholog is 100%.

Group of orthologs #271. Best score 228 bits
Score difference with first non-orthologous sequence - T.annulata:85 T.brucei:108

Q4UBZ3              	100.00%		Q57W45              	100.00%
Bootstrap support for Q4UBZ3 as seed ortholog is 99%.
Bootstrap support for Q57W45 as seed ortholog is 100%.

Group of orthologs #272. Best score 227 bits
Score difference with first non-orthologous sequence - T.annulata:227 T.brucei:227

Q4UEQ3              	100.00%		Q57ZT2              	100.00%
Bootstrap support for Q4UEQ3 as seed ortholog is 100%.
Bootstrap support for Q57ZT2 as seed ortholog is 100%.

Group of orthologs #273. Best score 225 bits
Score difference with first non-orthologous sequence - T.annulata:225 T.brucei:225

Q4UJ08              	100.00%		Q583J4              	100.00%
Bootstrap support for Q4UJ08 as seed ortholog is 100%.
Bootstrap support for Q583J4 as seed ortholog is 100%.

Group of orthologs #274. Best score 224 bits
Score difference with first non-orthologous sequence - T.annulata:224 T.brucei:224

Q4UEW2              	100.00%		Q383X6              	100.00%
                    	       		Q384Y3              	9.76%
Bootstrap support for Q4UEW2 as seed ortholog is 100%.
Bootstrap support for Q383X6 as seed ortholog is 100%.

Group of orthologs #275. Best score 224 bits
Score difference with first non-orthologous sequence - T.annulata:224 T.brucei:71

Q4UGA3              	100.00%		Q38F91              	100.00%
Bootstrap support for Q4UGA3 as seed ortholog is 100%.
Bootstrap support for Q38F91 as seed ortholog is 95%.

Group of orthologs #276. Best score 224 bits
Score difference with first non-orthologous sequence - T.annulata:224 T.brucei:224

Q4U9I9              	100.00%		Q585P9              	100.00%
Bootstrap support for Q4U9I9 as seed ortholog is 100%.
Bootstrap support for Q585P9 as seed ortholog is 100%.

Group of orthologs #277. Best score 223 bits
Score difference with first non-orthologous sequence - T.annulata:223 T.brucei:223

Q4U8I2              	100.00%		Q57YM1              	100.00%
Bootstrap support for Q4U8I2 as seed ortholog is 100%.
Bootstrap support for Q57YM1 as seed ortholog is 100%.

Group of orthologs #278. Best score 223 bits
Score difference with first non-orthologous sequence - T.annulata:223 T.brucei:58

Q4UC87              	100.00%		Q57V58              	100.00%
Bootstrap support for Q4UC87 as seed ortholog is 100%.
Bootstrap support for Q57V58 as seed ortholog is 91%.

Group of orthologs #279. Best score 222 bits
Score difference with first non-orthologous sequence - T.annulata:111 T.brucei:222

Q4UAB0              	100.00%		Q382C3              	100.00%
Bootstrap support for Q4UAB0 as seed ortholog is 99%.
Bootstrap support for Q382C3 as seed ortholog is 100%.

Group of orthologs #280. Best score 221 bits
Score difference with first non-orthologous sequence - T.annulata:221 T.brucei:221

Q4UDB3              	100.00%		Q38BN3              	100.00%
                    	       		Q385Q9              	10.45%
Bootstrap support for Q4UDB3 as seed ortholog is 100%.
Bootstrap support for Q38BN3 as seed ortholog is 100%.

Group of orthologs #281. Best score 220 bits
Score difference with first non-orthologous sequence - T.annulata:107 T.brucei:103

Q4U8G8              	100.00%		Q385P2              	100.00%
Bootstrap support for Q4U8G8 as seed ortholog is 97%.
Bootstrap support for Q385P2 as seed ortholog is 97%.

Group of orthologs #282. Best score 220 bits
Score difference with first non-orthologous sequence - T.annulata:220 T.brucei:220

Q4UAN7              	100.00%		Q57U32              	100.00%
Bootstrap support for Q4UAN7 as seed ortholog is 100%.
Bootstrap support for Q57U32 as seed ortholog is 100%.

Group of orthologs #283. Best score 219 bits
Score difference with first non-orthologous sequence - T.annulata:110 T.brucei:219

Q4U9J9              	100.00%		Q385L6              	100.00%
Bootstrap support for Q4U9J9 as seed ortholog is 99%.
Bootstrap support for Q385L6 as seed ortholog is 100%.

Group of orthologs #284. Best score 218 bits
Score difference with first non-orthologous sequence - T.annulata:39 T.brucei:52

Q4UDU7              	100.00%		Q388X2              	100.00%
Bootstrap support for Q4UDU7 as seed ortholog is 73%.
Alternative seed ortholog is Q4U901 (39 bits away from this cluster)
Bootstrap support for Q388X2 as seed ortholog is 79%.

Group of orthologs #285. Best score 218 bits
Score difference with first non-orthologous sequence - T.annulata:218 T.brucei:218

Q4UHY4              	100.00%		Q38C17              	100.00%
Bootstrap support for Q4UHY4 as seed ortholog is 100%.
Bootstrap support for Q38C17 as seed ortholog is 100%.

Group of orthologs #286. Best score 217 bits
Score difference with first non-orthologous sequence - T.annulata:89 T.brucei:217

Q4UA92              	100.00%		Q580A4              	100.00%
Bootstrap support for Q4UA92 as seed ortholog is 92%.
Bootstrap support for Q580A4 as seed ortholog is 100%.

Group of orthologs #287. Best score 216 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:60

Q4UB16              	100.00%		D6XMQ7              	100.00%
Bootstrap support for Q4UB16 as seed ortholog is 99%.
Bootstrap support for D6XMQ7 as seed ortholog is 99%.

Group of orthologs #288. Best score 216 bits
Score difference with first non-orthologous sequence - T.annulata:216 T.brucei:216

Q4U8T2              	100.00%		Q586L6              	100.00%
Bootstrap support for Q4U8T2 as seed ortholog is 100%.
Bootstrap support for Q586L6 as seed ortholog is 100%.

Group of orthologs #289. Best score 215 bits
Score difference with first non-orthologous sequence - T.annulata:215 T.brucei:55

Q4UDC3              	100.00%		Q4GZD1              	100.00%
Bootstrap support for Q4UDC3 as seed ortholog is 100%.
Bootstrap support for Q4GZD1 as seed ortholog is 87%.

Group of orthologs #290. Best score 215 bits
Score difference with first non-orthologous sequence - T.annulata:215 T.brucei:215

Q4UEG6              	100.00%		Q57UT4              	100.00%
Bootstrap support for Q4UEG6 as seed ortholog is 100%.
Bootstrap support for Q57UT4 as seed ortholog is 100%.

Group of orthologs #291. Best score 215 bits
Score difference with first non-orthologous sequence - T.annulata:215 T.brucei:215

Q4UBT1              	100.00%		Q57ZZ7              	100.00%
Bootstrap support for Q4UBT1 as seed ortholog is 100%.
Bootstrap support for Q57ZZ7 as seed ortholog is 100%.

Group of orthologs #292. Best score 214 bits
Score difference with first non-orthologous sequence - T.annulata:214 T.brucei:153

Q4UGM1              	100.00%		Q381P8              	100.00%
Bootstrap support for Q4UGM1 as seed ortholog is 100%.
Bootstrap support for Q381P8 as seed ortholog is 99%.

Group of orthologs #293. Best score 213 bits
Score difference with first non-orthologous sequence - T.annulata:213 T.brucei:213

Q4UFQ8              	100.00%		Q38B02              	100.00%
Bootstrap support for Q4UFQ8 as seed ortholog is 100%.
Bootstrap support for Q38B02 as seed ortholog is 100%.

Group of orthologs #294. Best score 213 bits
Score difference with first non-orthologous sequence - T.annulata:213 T.brucei:213

Q4UHX5              	100.00%		Q38AW2              	100.00%
Bootstrap support for Q4UHX5 as seed ortholog is 100%.
Bootstrap support for Q38AW2 as seed ortholog is 100%.

Group of orthologs #295. Best score 212 bits
Score difference with first non-orthologous sequence - T.annulata:212 T.brucei:143

Q4UG75              	100.00%		Q38FC0              	100.00%
Q4UH68              	100.00%		Q38FB9              	100.00%
Q4UDG8              	13.42%		Q38FB7              	59.15%
                    	       		Q38FB8              	59.15%
                    	       		Q38BS1              	40.44%
Bootstrap support for Q4UG75 as seed ortholog is 100%.
Bootstrap support for Q4UH68 as seed ortholog is 100%.
Bootstrap support for Q38FC0 as seed ortholog is 99%.
Bootstrap support for Q38FB9 as seed ortholog is 99%.

Group of orthologs #296. Best score 212 bits
Score difference with first non-orthologous sequence - T.annulata:212 T.brucei:212

Q4UBP2              	100.00%		Q38A31              	100.00%
Bootstrap support for Q4UBP2 as seed ortholog is 100%.
Bootstrap support for Q38A31 as seed ortholog is 100%.

Group of orthologs #297. Best score 211 bits
Score difference with first non-orthologous sequence - T.annulata:211 T.brucei:211

Q4UDE8              	100.00%		Q57VM1              	100.00%
Bootstrap support for Q4UDE8 as seed ortholog is 100%.
Bootstrap support for Q57VM1 as seed ortholog is 100%.

Group of orthologs #298. Best score 211 bits
Score difference with first non-orthologous sequence - T.annulata:211 T.brucei:39

Q4UG36              	100.00%		Q57V63              	100.00%
Bootstrap support for Q4UG36 as seed ortholog is 100%.
Bootstrap support for Q57V63 as seed ortholog is 77%.

Group of orthologs #299. Best score 210 bits
Score difference with first non-orthologous sequence - T.annulata:210 T.brucei:130

Q4UCW3              	100.00%		Q389T8              	100.00%
Bootstrap support for Q4UCW3 as seed ortholog is 100%.
Bootstrap support for Q389T8 as seed ortholog is 99%.

Group of orthologs #300. Best score 210 bits
Score difference with first non-orthologous sequence - T.annulata:210 T.brucei:210

Q4UB18              	100.00%		Q38EJ2              	100.00%
Bootstrap support for Q4UB18 as seed ortholog is 100%.
Bootstrap support for Q38EJ2 as seed ortholog is 100%.

Group of orthologs #301. Best score 210 bits
Score difference with first non-orthologous sequence - T.annulata:210 T.brucei:210

Q4UIQ6              	100.00%		Q38C90              	100.00%
Bootstrap support for Q4UIQ6 as seed ortholog is 100%.
Bootstrap support for Q38C90 as seed ortholog is 100%.

Group of orthologs #302. Best score 209 bits
Score difference with first non-orthologous sequence - T.annulata:37 T.brucei:209

Q4UAP7              	100.00%		D6XKT6              	100.00%
Bootstrap support for Q4UAP7 as seed ortholog is 92%.
Bootstrap support for D6XKT6 as seed ortholog is 100%.

Group of orthologs #303. Best score 209 bits
Score difference with first non-orthologous sequence - T.annulata:163 T.brucei:209

Q4UGU5              	100.00%		Q387N9              	100.00%
Bootstrap support for Q4UGU5 as seed ortholog is 100%.
Bootstrap support for Q387N9 as seed ortholog is 100%.

Group of orthologs #304. Best score 208 bits
Score difference with first non-orthologous sequence - T.annulata:208 T.brucei:208

Q4UB86              	100.00%		Q38BK6              	100.00%
                    	       		Q38BK7              	100.00%
Bootstrap support for Q4UB86 as seed ortholog is 100%.
Bootstrap support for Q38BK6 as seed ortholog is 100%.
Bootstrap support for Q38BK7 as seed ortholog is 100%.

Group of orthologs #305. Best score 208 bits
Score difference with first non-orthologous sequence - T.annulata:208 T.brucei:208

Q4UA32              	100.00%		Q4FKG9              	100.00%
Bootstrap support for Q4UA32 as seed ortholog is 100%.
Bootstrap support for Q4FKG9 as seed ortholog is 100%.

Group of orthologs #306. Best score 208 bits
Score difference with first non-orthologous sequence - T.annulata:208 T.brucei:208

Q4UIA0              	100.00%		Q38DP7              	100.00%
Bootstrap support for Q4UIA0 as seed ortholog is 100%.
Bootstrap support for Q38DP7 as seed ortholog is 100%.

Group of orthologs #307. Best score 207 bits
Score difference with first non-orthologous sequence - T.annulata:207 T.brucei:207

Q4U9Z6              	100.00%		Q57VP3              	100.00%
Bootstrap support for Q4U9Z6 as seed ortholog is 100%.
Bootstrap support for Q57VP3 as seed ortholog is 100%.

Group of orthologs #308. Best score 207 bits
Score difference with first non-orthologous sequence - T.annulata:121 T.brucei:207

Q4UH66              	100.00%		Q57UQ9              	100.00%
Bootstrap support for Q4UH66 as seed ortholog is 99%.
Bootstrap support for Q57UQ9 as seed ortholog is 100%.

Group of orthologs #309. Best score 207 bits
Score difference with first non-orthologous sequence - T.annulata:207 T.brucei:207

Q4UIH2              	100.00%		Q585Y7              	100.00%
Bootstrap support for Q4UIH2 as seed ortholog is 100%.
Bootstrap support for Q585Y7 as seed ortholog is 100%.

Group of orthologs #310. Best score 205 bits
Score difference with first non-orthologous sequence - T.annulata:60 T.brucei:78

Q4U8M8              	100.00%		Q388P9              	100.00%
                    	       		Q57YE4              	100.00%
                    	       		Q388Q0              	51.28%
Bootstrap support for Q4U8M8 as seed ortholog is 95%.
Bootstrap support for Q388P9 as seed ortholog is 97%.
Bootstrap support for Q57YE4 as seed ortholog is 98%.

Group of orthologs #311. Best score 205 bits
Score difference with first non-orthologous sequence - T.annulata:205 T.brucei:205

Q4UDW3              	100.00%		Q581Z6              	100.00%
Q4UDW1              	41.21%		
Bootstrap support for Q4UDW3 as seed ortholog is 100%.
Bootstrap support for Q581Z6 as seed ortholog is 100%.

Group of orthologs #312. Best score 205 bits
Score difference with first non-orthologous sequence - T.annulata:205 T.brucei:205

Q4UG32              	100.00%		Q38BV5              	100.00%
Bootstrap support for Q4UG32 as seed ortholog is 100%.
Bootstrap support for Q38BV5 as seed ortholog is 100%.

Group of orthologs #313. Best score 204 bits
Score difference with first non-orthologous sequence - T.annulata:204 T.brucei:204

Q4UH27              	100.00%		Q57U84              	100.00%
Bootstrap support for Q4UH27 as seed ortholog is 100%.
Bootstrap support for Q57U84 as seed ortholog is 100%.

Group of orthologs #314. Best score 204 bits
Score difference with first non-orthologous sequence - T.annulata:204 T.brucei:204

Q4UI18              	100.00%		Q586L7              	100.00%
Bootstrap support for Q4UI18 as seed ortholog is 100%.
Bootstrap support for Q586L7 as seed ortholog is 100%.

Group of orthologs #315. Best score 203 bits
Score difference with first non-orthologous sequence - T.annulata:203 T.brucei:203

Q4UEK6              	100.00%		Q4GZF9              	100.00%
                    	       		Q4GZF1              	94.89%
Bootstrap support for Q4UEK6 as seed ortholog is 100%.
Bootstrap support for Q4GZF9 as seed ortholog is 100%.

Group of orthologs #316. Best score 202 bits
Score difference with first non-orthologous sequence - T.annulata:202 T.brucei:202

Q4UEJ3              	100.00%		Q38CX3              	100.00%
                    	       		Q38CL9              	90.49%
Bootstrap support for Q4UEJ3 as seed ortholog is 100%.
Bootstrap support for Q38CX3 as seed ortholog is 100%.

Group of orthologs #317. Best score 202 bits
Score difference with first non-orthologous sequence - T.annulata:202 T.brucei:202

Q4UG38              	100.00%		Q382A4              	100.00%
Bootstrap support for Q4UG38 as seed ortholog is 100%.
Bootstrap support for Q382A4 as seed ortholog is 100%.

Group of orthologs #318. Best score 202 bits
Score difference with first non-orthologous sequence - T.annulata:202 T.brucei:202

Q4UB42              	100.00%		Q38CD1              	100.00%
Bootstrap support for Q4UB42 as seed ortholog is 100%.
Bootstrap support for Q38CD1 as seed ortholog is 100%.

Group of orthologs #319. Best score 202 bits
Score difference with first non-orthologous sequence - T.annulata:202 T.brucei:202

Q4UH48              	100.00%		Q586C2              	100.00%
Bootstrap support for Q4UH48 as seed ortholog is 100%.
Bootstrap support for Q586C2 as seed ortholog is 100%.

Group of orthologs #320. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:108 T.brucei:50

Q4UFJ8              	100.00%		Q38BA8              	100.00%
                    	       		Q586U3              	5.68%
Bootstrap support for Q4UFJ8 as seed ortholog is 99%.
Bootstrap support for Q38BA8 as seed ortholog is 66%.
Alternative seed ortholog is Q57V97 (50 bits away from this cluster)

Group of orthologs #321. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:200 T.brucei:200

Q4UEM9              	100.00%		Q386C5              	100.00%
Bootstrap support for Q4UEM9 as seed ortholog is 100%.
Bootstrap support for Q386C5 as seed ortholog is 100%.

Group of orthologs #322. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:200 T.brucei:200

Q4UCX9              	100.00%		Q389A6              	100.00%
Bootstrap support for Q4UCX9 as seed ortholog is 100%.
Bootstrap support for Q389A6 as seed ortholog is 100%.

Group of orthologs #323. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:33 T.brucei:30

Q4UG97              	100.00%		Q389Z8              	100.00%
Bootstrap support for Q4UG97 as seed ortholog is 66%.
Alternative seed ortholog is Q4UE18 (33 bits away from this cluster)
Bootstrap support for Q389Z8 as seed ortholog is 62%.
Alternative seed ortholog is Q57Z07 (30 bits away from this cluster)

Group of orthologs #324. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:200 T.brucei:63

Q4UG80              	100.00%		Q57UC3              	100.00%
Bootstrap support for Q4UG80 as seed ortholog is 100%.
Bootstrap support for Q57UC3 as seed ortholog is 91%.

Group of orthologs #325. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:200 T.brucei:55

Q4UG00              	100.00%		Q57WJ3              	100.00%
Bootstrap support for Q4UG00 as seed ortholog is 100%.
Bootstrap support for Q57WJ3 as seed ortholog is 89%.

Group of orthologs #326. Best score 200 bits
Score difference with first non-orthologous sequence - T.annulata:200 T.brucei:200

Q4UFS9              	100.00%		Q57YL6              	100.00%
Bootstrap support for Q4UFS9 as seed ortholog is 100%.
Bootstrap support for Q57YL6 as seed ortholog is 100%.

Group of orthologs #327. Best score 199 bits
Score difference with first non-orthologous sequence - T.annulata:199 T.brucei:199

Q4UGG4              	100.00%		Q38BT6              	100.00%
Bootstrap support for Q4UGG4 as seed ortholog is 100%.
Bootstrap support for Q38BT6 as seed ortholog is 100%.

Group of orthologs #328. Best score 199 bits
Score difference with first non-orthologous sequence - T.annulata:199 T.brucei:64

Q4UHG4              	100.00%		Q38BZ2              	100.00%
Bootstrap support for Q4UHG4 as seed ortholog is 100%.
Bootstrap support for Q38BZ2 as seed ortholog is 98%.

Group of orthologs #329. Best score 199 bits
Score difference with first non-orthologous sequence - T.annulata:137 T.brucei:199

Q4UEB5              	100.00%		Q57ZB8              	100.00%
Bootstrap support for Q4UEB5 as seed ortholog is 99%.
Bootstrap support for Q57ZB8 as seed ortholog is 100%.

Group of orthologs #330. Best score 198 bits
Score difference with first non-orthologous sequence - T.annulata:198 T.brucei:198

Q4U965              	100.00%		Q586P4              	100.00%
Bootstrap support for Q4U965 as seed ortholog is 100%.
Bootstrap support for Q586P4 as seed ortholog is 100%.

Group of orthologs #331. Best score 197 bits
Score difference with first non-orthologous sequence - T.annulata:148 T.brucei:197

Q4UE25              	100.00%		Q38DP2              	100.00%
Bootstrap support for Q4UE25 as seed ortholog is 100%.
Bootstrap support for Q38DP2 as seed ortholog is 100%.

Group of orthologs #332. Best score 196 bits
Score difference with first non-orthologous sequence - T.annulata:196 T.brucei:196

Q4UA76              	100.00%		Q38EE3              	100.00%
Bootstrap support for Q4UA76 as seed ortholog is 100%.
Bootstrap support for Q38EE3 as seed ortholog is 100%.

Group of orthologs #333. Best score 196 bits
Score difference with first non-orthologous sequence - T.annulata:196 T.brucei:196

Q4UCR5              	100.00%		Q57ZI7              	100.00%
Bootstrap support for Q4UCR5 as seed ortholog is 100%.
Bootstrap support for Q57ZI7 as seed ortholog is 100%.

Group of orthologs #334. Best score 196 bits
Score difference with first non-orthologous sequence - T.annulata:196 T.brucei:196

Q4UDC9              	100.00%		Q580K6              	100.00%
Bootstrap support for Q4UDC9 as seed ortholog is 100%.
Bootstrap support for Q580K6 as seed ortholog is 100%.

Group of orthologs #335. Best score 195 bits
Score difference with first non-orthologous sequence - T.annulata:24 T.brucei:64

Q4UIZ9              	100.00%		Q381T3              	100.00%
                    	       		Q381J5              	77.11%
Bootstrap support for Q4UIZ9 as seed ortholog is 78%.
Bootstrap support for Q381T3 as seed ortholog is 97%.

Group of orthologs #336. Best score 195 bits
Score difference with first non-orthologous sequence - T.annulata:128 T.brucei:133

Q4UIU4              	100.00%		Q386F6              	100.00%
Bootstrap support for Q4UIU4 as seed ortholog is 99%.
Bootstrap support for Q386F6 as seed ortholog is 99%.

Group of orthologs #337. Best score 193 bits
Score difference with first non-orthologous sequence - T.annulata:193 T.brucei:193

Q4U969              	100.00%		Q384T8              	100.00%
Bootstrap support for Q4U969 as seed ortholog is 100%.
Bootstrap support for Q384T8 as seed ortholog is 100%.

Group of orthologs #338. Best score 191 bits
Score difference with first non-orthologous sequence - T.annulata:191 T.brucei:191

Q4UGN6              	100.00%		Q386V3              	100.00%
Bootstrap support for Q4UGN6 as seed ortholog is 100%.
Bootstrap support for Q386V3 as seed ortholog is 100%.

Group of orthologs #339. Best score 191 bits
Score difference with first non-orthologous sequence - T.annulata:191 T.brucei:191

Q4UGE1              	100.00%		Q38DI7              	100.00%
Bootstrap support for Q4UGE1 as seed ortholog is 100%.
Bootstrap support for Q38DI7 as seed ortholog is 100%.

Group of orthologs #340. Best score 190 bits
Score difference with first non-orthologous sequence - T.annulata:190 T.brucei:190

Q4UG06              	100.00%		Q38C42              	100.00%
Q4UG08              	100.00%		Q38C41              	97.12%
Bootstrap support for Q4UG06 as seed ortholog is 100%.
Bootstrap support for Q4UG08 as seed ortholog is 100%.
Bootstrap support for Q38C42 as seed ortholog is 100%.

Group of orthologs #341. Best score 190 bits
Score difference with first non-orthologous sequence - T.annulata:190 T.brucei:190

Q4UA58              	100.00%		Q57VR6              	100.00%
Bootstrap support for Q4UA58 as seed ortholog is 100%.
Bootstrap support for Q57VR6 as seed ortholog is 100%.

Group of orthologs #342. Best score 190 bits
Score difference with first non-orthologous sequence - T.annulata:190 T.brucei:86

Q4U9D4              	100.00%		Q57X54              	100.00%
Bootstrap support for Q4U9D4 as seed ortholog is 100%.
Bootstrap support for Q57X54 as seed ortholog is 99%.

Group of orthologs #343. Best score 189 bits
Score difference with first non-orthologous sequence - T.annulata:189 T.brucei:189

Q4U9I8              	100.00%		Q388F1              	100.00%
Bootstrap support for Q4U9I8 as seed ortholog is 100%.
Bootstrap support for Q388F1 as seed ortholog is 100%.

Group of orthologs #344. Best score 188 bits
Score difference with first non-orthologous sequence - T.annulata:188 T.brucei:188

Q4UGT3              	100.00%		Q38B69              	100.00%
Bootstrap support for Q4UGT3 as seed ortholog is 100%.
Bootstrap support for Q38B69 as seed ortholog is 100%.

Group of orthologs #345. Best score 188 bits
Score difference with first non-orthologous sequence - T.annulata:188 T.brucei:188

Q4UHG5              	100.00%		Q583F0              	100.00%
Bootstrap support for Q4UHG5 as seed ortholog is 100%.
Bootstrap support for Q583F0 as seed ortholog is 100%.

Group of orthologs #346. Best score 187 bits
Score difference with first non-orthologous sequence - T.annulata:187 T.brucei:139

Q4UF26              	100.00%		Q386K4              	100.00%
Bootstrap support for Q4UF26 as seed ortholog is 100%.
Bootstrap support for Q386K4 as seed ortholog is 99%.

Group of orthologs #347. Best score 187 bits
Score difference with first non-orthologous sequence - T.annulata:187 T.brucei:187

Q4UI52              	100.00%		Q57V01              	100.00%
Bootstrap support for Q4UI52 as seed ortholog is 100%.
Bootstrap support for Q57V01 as seed ortholog is 100%.

Group of orthologs #348. Best score 186 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:23

Q4UIR7              	100.00%		Q583H1              	100.00%
Q4UIH6              	29.54%		
Q4UEA3              	14.53%		
Bootstrap support for Q4UIR7 as seed ortholog is 98%.
Bootstrap support for Q583H1 as seed ortholog is 69%.
Alternative seed ortholog is Q38BL0 (23 bits away from this cluster)

Group of orthologs #349. Best score 186 bits
Score difference with first non-orthologous sequence - T.annulata:141 T.brucei:124

Q4UB43              	100.00%		Q57V35              	100.00%
                    	       		Q57V37              	100.00%
Bootstrap support for Q4UB43 as seed ortholog is 100%.
Bootstrap support for Q57V35 as seed ortholog is 100%.
Bootstrap support for Q57V37 as seed ortholog is 99%.

Group of orthologs #350. Best score 186 bits
Score difference with first non-orthologous sequence - T.annulata:186 T.brucei:186

Q4U9E9              	100.00%		Q9BPQ5              	100.00%
Bootstrap support for Q4U9E9 as seed ortholog is 100%.
Bootstrap support for Q9BPQ5 as seed ortholog is 100%.

Group of orthologs #351. Best score 185 bits
Score difference with first non-orthologous sequence - T.annulata:185 T.brucei:185

Q4UE92              	100.00%		Q583D4              	100.00%
Q4UAT8              	100.00%		Q584D6              	100.00%
Q4UD68              	93.04%		Q581W6              	26.09%
Q4UAT9              	92.10%		
Q4UFX8              	87.47%		
Q4UAR4              	84.23%		
Q4UAR3              	84.09%		
Q4UHH5              	83.01%		
Q4UAR5              	81.52%		
Q4UD84              	80.93%		
Q4UD47              	80.06%		
Q4UD49              	77.45%		
Q4UFT2              	76.37%		
Q4UE94              	63.17%		
Q4UFS2              	51.58%		
Q4UE95              	50.17%		
Q4U8E0              	34.96%		
Bootstrap support for Q4UE92 as seed ortholog is 100%.
Bootstrap support for Q4UAT8 as seed ortholog is 100%.
Bootstrap support for Q583D4 as seed ortholog is 100%.
Bootstrap support for Q584D6 as seed ortholog is 100%.

Group of orthologs #352. Best score 185 bits
Score difference with first non-orthologous sequence - T.annulata:185 T.brucei:185

Q4U9R8              	100.00%		Q381I3              	100.00%
Bootstrap support for Q4U9R8 as seed ortholog is 100%.
Bootstrap support for Q381I3 as seed ortholog is 100%.

Group of orthologs #353. Best score 185 bits
Score difference with first non-orthologous sequence - T.annulata:185 T.brucei:44

Q4UHT8              	100.00%		D6XIY7              	100.00%
Bootstrap support for Q4UHT8 as seed ortholog is 100%.
Bootstrap support for D6XIY7 as seed ortholog is 83%.

Group of orthologs #354. Best score 185 bits
Score difference with first non-orthologous sequence - T.annulata:85 T.brucei:56

Q4UBB3              	100.00%		Q38DS4              	100.00%
Bootstrap support for Q4UBB3 as seed ortholog is 99%.
Bootstrap support for Q38DS4 as seed ortholog is 96%.

Group of orthologs #355. Best score 185 bits
Score difference with first non-orthologous sequence - T.annulata:185 T.brucei:185

Q4UBC0              	100.00%		Q57ZC7              	100.00%
Bootstrap support for Q4UBC0 as seed ortholog is 100%.
Bootstrap support for Q57ZC7 as seed ortholog is 100%.

Group of orthologs #356. Best score 184 bits
Score difference with first non-orthologous sequence - T.annulata:184 T.brucei:184

Q4UHM1              	100.00%		Q4GYW5              	100.00%
Bootstrap support for Q4UHM1 as seed ortholog is 100%.
Bootstrap support for Q4GYW5 as seed ortholog is 100%.

Group of orthologs #357. Best score 184 bits
Score difference with first non-orthologous sequence - T.annulata:184 T.brucei:184

Q4UA66              	100.00%		Q585M1              	100.00%
Bootstrap support for Q4UA66 as seed ortholog is 100%.
Bootstrap support for Q585M1 as seed ortholog is 100%.

Group of orthologs #358. Best score 183 bits
Score difference with first non-orthologous sequence - T.annulata:183 T.brucei:183

Q4UA26              	100.00%		Q38D53              	100.00%
                    	       		Q57YK4              	100.00%
Bootstrap support for Q4UA26 as seed ortholog is 100%.
Bootstrap support for Q38D53 as seed ortholog is 100%.
Bootstrap support for Q57YK4 as seed ortholog is 100%.

Group of orthologs #359. Best score 183 bits
Score difference with first non-orthologous sequence - T.annulata:183 T.brucei:183

Q4U8P0              	100.00%		Q383M8              	100.00%
Bootstrap support for Q4U8P0 as seed ortholog is 100%.
Bootstrap support for Q383M8 as seed ortholog is 100%.

Group of orthologs #360. Best score 183 bits
Score difference with first non-orthologous sequence - T.annulata:183 T.brucei:183

Q4UE72              	100.00%		Q584B2              	100.00%
Bootstrap support for Q4UE72 as seed ortholog is 100%.
Bootstrap support for Q584B2 as seed ortholog is 100%.

Group of orthologs #361. Best score 183 bits
Score difference with first non-orthologous sequence - T.annulata:60 T.brucei:50

Q4UFD3              	100.00%		Q586J5              	100.00%
Bootstrap support for Q4UFD3 as seed ortholog is 98%.
Bootstrap support for Q586J5 as seed ortholog is 98%.

Group of orthologs #362. Best score 182 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:182

Q4UAH1              	100.00%		Q383V8              	100.00%
Bootstrap support for Q4UAH1 as seed ortholog is 100%.
Bootstrap support for Q383V8 as seed ortholog is 100%.

Group of orthologs #363. Best score 182 bits
Score difference with first non-orthologous sequence - T.annulata:182 T.brucei:182

Q4UGS6              	100.00%		Q57ZU8              	100.00%
Bootstrap support for Q4UGS6 as seed ortholog is 100%.
Bootstrap support for Q57ZU8 as seed ortholog is 100%.

Group of orthologs #364. Best score 181 bits
Score difference with first non-orthologous sequence - T.annulata:181 T.brucei:181

Q4UC14              	100.00%		Q57WQ0              	100.00%
                    	       		Q38C73              	6.42%
Bootstrap support for Q4UC14 as seed ortholog is 100%.
Bootstrap support for Q57WQ0 as seed ortholog is 100%.

Group of orthologs #365. Best score 181 bits
Score difference with first non-orthologous sequence - T.annulata:29 T.brucei:181

Q4UGN9              	100.00%		Q38AM0              	100.00%
Bootstrap support for Q4UGN9 as seed ortholog is 79%.
Bootstrap support for Q38AM0 as seed ortholog is 100%.

Group of orthologs #366. Best score 181 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:84

Q4UH55              	100.00%		Q38EF6              	100.00%
Bootstrap support for Q4UH55 as seed ortholog is 99%.
Bootstrap support for Q38EF6 as seed ortholog is 99%.

Group of orthologs #367. Best score 181 bits
Score difference with first non-orthologous sequence - T.annulata:181 T.brucei:181

Q4U8X5              	100.00%		Q582F1              	100.00%
Bootstrap support for Q4U8X5 as seed ortholog is 100%.
Bootstrap support for Q582F1 as seed ortholog is 100%.

Group of orthologs #368. Best score 180 bits
Score difference with first non-orthologous sequence - T.annulata:180 T.brucei:180

Q4UA69              	100.00%		Q388E9              	100.00%
Bootstrap support for Q4UA69 as seed ortholog is 100%.
Bootstrap support for Q388E9 as seed ortholog is 100%.

Group of orthologs #369. Best score 180 bits
Score difference with first non-orthologous sequence - T.annulata:180 T.brucei:28

Q4UCV6              	100.00%		Q38BH5              	100.00%
Bootstrap support for Q4UCV6 as seed ortholog is 100%.
Bootstrap support for Q38BH5 as seed ortholog is 88%.

Group of orthologs #370. Best score 179 bits
Score difference with first non-orthologous sequence - T.annulata:179 T.brucei:90

Q4UII4              	100.00%		Q386K8              	100.00%
                    	       		Q38A32              	23.06%
                    	       		Q57ZX2              	15.56%
Bootstrap support for Q4UII4 as seed ortholog is 100%.
Bootstrap support for Q386K8 as seed ortholog is 98%.

Group of orthologs #371. Best score 179 bits
Score difference with first non-orthologous sequence - T.annulata:179 T.brucei:179

Q4U9S9              	100.00%		D6XKS6              	100.00%
Bootstrap support for Q4U9S9 as seed ortholog is 100%.
Bootstrap support for D6XKS6 as seed ortholog is 100%.

Group of orthologs #372. Best score 179 bits
Score difference with first non-orthologous sequence - T.annulata:179 T.brucei:179

Q4UI17              	100.00%		Q388D6              	100.00%
Bootstrap support for Q4UI17 as seed ortholog is 100%.
Bootstrap support for Q388D6 as seed ortholog is 100%.

Group of orthologs #373. Best score 178 bits
Score difference with first non-orthologous sequence - T.annulata:178 T.brucei:178

Q4UG74              	100.00%		Q383N4              	100.00%
Bootstrap support for Q4UG74 as seed ortholog is 100%.
Bootstrap support for Q383N4 as seed ortholog is 100%.

Group of orthologs #374. Best score 178 bits
Score difference with first non-orthologous sequence - T.annulata:35 T.brucei:19

Q4UEY1              	100.00%		Q38AB7              	100.00%
Bootstrap support for Q4UEY1 as seed ortholog is 75%.
Bootstrap support for Q38AB7 as seed ortholog is 61%.
Alternative seed ortholog is Q381S2 (19 bits away from this cluster)

Group of orthologs #375. Best score 178 bits
Score difference with first non-orthologous sequence - T.annulata:178 T.brucei:178

Q4UFR7              	100.00%		Q582H1              	100.00%
Bootstrap support for Q4UFR7 as seed ortholog is 100%.
Bootstrap support for Q582H1 as seed ortholog is 100%.

Group of orthologs #376. Best score 177 bits
Score difference with first non-orthologous sequence - T.annulata:177 T.brucei:101

Q4UJ48              	100.00%		Q383K4              	100.00%
Bootstrap support for Q4UJ48 as seed ortholog is 100%.
Bootstrap support for Q383K4 as seed ortholog is 74%.
Alternative seed ortholog is Q583R9 (101 bits away from this cluster)

Group of orthologs #377. Best score 177 bits
Score difference with first non-orthologous sequence - T.annulata:177 T.brucei:177

Q4UGJ3              	100.00%		Q387J7              	100.00%
Bootstrap support for Q4UGJ3 as seed ortholog is 100%.
Bootstrap support for Q387J7 as seed ortholog is 100%.

Group of orthologs #378. Best score 177 bits
Score difference with first non-orthologous sequence - T.annulata:177 T.brucei:76

Q4UA55              	100.00%		Q38FX1              	100.00%
Bootstrap support for Q4UA55 as seed ortholog is 100%.
Bootstrap support for Q38FX1 as seed ortholog is 97%.

Group of orthologs #379. Best score 177 bits
Score difference with first non-orthologous sequence - T.annulata:177 T.brucei:177

Q4UE57              	100.00%		Q57V39              	100.00%
Bootstrap support for Q4UE57 as seed ortholog is 100%.
Bootstrap support for Q57V39 as seed ortholog is 100%.

Group of orthologs #380. Best score 176 bits
Score difference with first non-orthologous sequence - T.annulata:176 T.brucei:176

Q4UE78              	100.00%		Q388K2              	100.00%
Bootstrap support for Q4UE78 as seed ortholog is 100%.
Bootstrap support for Q388K2 as seed ortholog is 100%.

Group of orthologs #381. Best score 176 bits
Score difference with first non-orthologous sequence - T.annulata:79 T.brucei:97

Q4UBP1              	100.00%		Q586L8              	100.00%
Bootstrap support for Q4UBP1 as seed ortholog is 99%.
Bootstrap support for Q586L8 as seed ortholog is 99%.

Group of orthologs #382. Best score 175 bits
Score difference with first non-orthologous sequence - T.annulata:175 T.brucei:175

Q4U9Y9              	100.00%		Q38CL8              	100.00%
                    	       		Q384Q8              	36.60%
                    	       		D6XKU7              	15.98%
Bootstrap support for Q4U9Y9 as seed ortholog is 100%.
Bootstrap support for Q38CL8 as seed ortholog is 100%.

Group of orthologs #383. Best score 175 bits
Score difference with first non-orthologous sequence - T.annulata:100 T.brucei:99

Q4UHZ2              	100.00%		Q382E3              	100.00%
Bootstrap support for Q4UHZ2 as seed ortholog is 100%.
Bootstrap support for Q382E3 as seed ortholog is 99%.

Group of orthologs #384. Best score 175 bits
Score difference with first non-orthologous sequence - T.annulata:175 T.brucei:175

Q4UEW8              	100.00%		Q387T3              	100.00%
Bootstrap support for Q4UEW8 as seed ortholog is 100%.
Bootstrap support for Q387T3 as seed ortholog is 100%.

Group of orthologs #385. Best score 175 bits
Score difference with first non-orthologous sequence - T.annulata:175 T.brucei:175

Q4UGZ3              	100.00%		Q38EZ0              	100.00%
Bootstrap support for Q4UGZ3 as seed ortholog is 100%.
Bootstrap support for Q38EZ0 as seed ortholog is 100%.

Group of orthologs #386. Best score 175 bits
Score difference with first non-orthologous sequence - T.annulata:175 T.brucei:83

Q4UGK9              	100.00%		Q57V78              	100.00%
Bootstrap support for Q4UGK9 as seed ortholog is 100%.
Bootstrap support for Q57V78 as seed ortholog is 97%.

Group of orthologs #387. Best score 174 bits
Score difference with first non-orthologous sequence - T.annulata:174 T.brucei:174

Q4UAN5              	100.00%		Q57XN7              	100.00%
Bootstrap support for Q4UAN5 as seed ortholog is 100%.
Bootstrap support for Q57XN7 as seed ortholog is 100%.

Group of orthologs #388. Best score 173 bits
Score difference with first non-orthologous sequence - T.annulata:82 T.brucei:173

Q4U8M3              	100.00%		Q384K5              	100.00%
Bootstrap support for Q4U8M3 as seed ortholog is 99%.
Bootstrap support for Q384K5 as seed ortholog is 100%.

Group of orthologs #389. Best score 170 bits
Score difference with first non-orthologous sequence - T.annulata:170 T.brucei:170

Q4U9N0              	100.00%		Q57VV8              	100.00%
Bootstrap support for Q4U9N0 as seed ortholog is 100%.
Bootstrap support for Q57VV8 as seed ortholog is 100%.

Group of orthologs #390. Best score 170 bits
Score difference with first non-orthologous sequence - T.annulata:170 T.brucei:170

Q4U9Z1              	100.00%		Q57X95              	100.00%
Bootstrap support for Q4U9Z1 as seed ortholog is 100%.
Bootstrap support for Q57X95 as seed ortholog is 100%.

Group of orthologs #391. Best score 168 bits
Score difference with first non-orthologous sequence - T.annulata:168 T.brucei:168

Q4UIL6              	100.00%		Q386W0              	100.00%
Bootstrap support for Q4UIL6 as seed ortholog is 100%.
Bootstrap support for Q386W0 as seed ortholog is 100%.

Group of orthologs #392. Best score 168 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:168

Q4UBZ6              	100.00%		Q38F34              	100.00%
Bootstrap support for Q4UBZ6 as seed ortholog is 93%.
Bootstrap support for Q38F34 as seed ortholog is 100%.

Group of orthologs #393. Best score 167 bits
Score difference with first non-orthologous sequence - T.annulata:167 T.brucei:167

Q4UCA6              	100.00%		Q57YC1              	100.00%
Q4UCA2              	56.38%		
Q4UCA4              	53.40%		
Q4UCA5              	49.67%		
Q4UCA1              	47.34%		
Q4UCA0              	45.39%		
Bootstrap support for Q4UCA6 as seed ortholog is 100%.
Bootstrap support for Q57YC1 as seed ortholog is 100%.

Group of orthologs #394. Best score 167 bits
Score difference with first non-orthologous sequence - T.annulata:167 T.brucei:167

Q4UGY5              	100.00%		Q38CD0              	100.00%
                    	       		Q587D5              	83.98%
Bootstrap support for Q4UGY5 as seed ortholog is 100%.
Bootstrap support for Q38CD0 as seed ortholog is 100%.

Group of orthologs #395. Best score 167 bits
Score difference with first non-orthologous sequence - T.annulata:167 T.brucei:167

Q4UHW4              	100.00%		Q385H1              	100.00%
Bootstrap support for Q4UHW4 as seed ortholog is 100%.
Bootstrap support for Q385H1 as seed ortholog is 100%.

Group of orthologs #396. Best score 166 bits
Score difference with first non-orthologous sequence - T.annulata:166 T.brucei:166

Q4UFQ9              	100.00%		Q38E89              	100.00%
Q4UFR0              	6.18%		
Bootstrap support for Q4UFQ9 as seed ortholog is 100%.
Bootstrap support for Q38E89 as seed ortholog is 100%.

Group of orthologs #397. Best score 166 bits
Score difference with first non-orthologous sequence - T.annulata:166 T.brucei:166

Q4UCE5              	100.00%		D6XCY8              	100.00%
Bootstrap support for Q4UCE5 as seed ortholog is 100%.
Bootstrap support for D6XCY8 as seed ortholog is 100%.

Group of orthologs #398. Best score 166 bits
Score difference with first non-orthologous sequence - T.annulata:4 T.brucei:166

Q4UI73              	100.00%		Q383J7              	100.00%
Bootstrap support for Q4UI73 as seed ortholog is 54%.
Alternative seed ortholog is Q4UEU0 (4 bits away from this cluster)
Bootstrap support for Q383J7 as seed ortholog is 100%.

Group of orthologs #399. Best score 166 bits
Score difference with first non-orthologous sequence - T.annulata:166 T.brucei:166

Q4U9R3              	100.00%		Q57W18              	100.00%
Bootstrap support for Q4U9R3 as seed ortholog is 100%.
Bootstrap support for Q57W18 as seed ortholog is 100%.

Group of orthologs #400. Best score 165 bits
Score difference with first non-orthologous sequence - T.annulata:165 T.brucei:165

Q4UF75              	100.00%		Q385T6              	100.00%
Bootstrap support for Q4UF75 as seed ortholog is 100%.
Bootstrap support for Q385T6 as seed ortholog is 100%.

Group of orthologs #401. Best score 165 bits
Score difference with first non-orthologous sequence - T.annulata:38 T.brucei:14

Q4UJ50              	100.00%		D6XLG8              	100.00%
Bootstrap support for Q4UJ50 as seed ortholog is 91%.
Bootstrap support for D6XLG8 as seed ortholog is 73%.
Alternative seed ortholog is Q382G2 (14 bits away from this cluster)

Group of orthologs #402. Best score 165 bits
Score difference with first non-orthologous sequence - T.annulata:41 T.brucei:70

Q4UDL4              	100.00%		Q57YD9              	100.00%
Bootstrap support for Q4UDL4 as seed ortholog is 96%.
Bootstrap support for Q57YD9 as seed ortholog is 99%.

Group of orthologs #403. Best score 164 bits
Score difference with first non-orthologous sequence - T.annulata:25 T.brucei:52

Q4UD03              	100.00%		Q57VP6              	100.00%
Bootstrap support for Q4UD03 as seed ortholog is 85%.
Bootstrap support for Q57VP6 as seed ortholog is 99%.

Group of orthologs #404. Best score 163 bits
Score difference with first non-orthologous sequence - T.annulata:163 T.brucei:163

Q4UIF4              	100.00%		Q38BS9              	100.00%
                    	       		Q387W0              	20.55%
                    	       		Q389P2              	14.82%
Bootstrap support for Q4UIF4 as seed ortholog is 100%.
Bootstrap support for Q38BS9 as seed ortholog is 100%.

Group of orthologs #405. Best score 163 bits
Score difference with first non-orthologous sequence - T.annulata:98 T.brucei:29

Q4UGA0              	100.00%		Q382T9              	100.00%
                    	       		Q382U0              	74.97%
Bootstrap support for Q4UGA0 as seed ortholog is 99%.
Bootstrap support for Q382T9 as seed ortholog is 71%.
Alternative seed ortholog is Q386J7 (29 bits away from this cluster)

Group of orthologs #406. Best score 163 bits
Score difference with first non-orthologous sequence - T.annulata:163 T.brucei:45

Q4U9T7              	100.00%		Q583Q1              	100.00%
Bootstrap support for Q4U9T7 as seed ortholog is 100%.
Bootstrap support for Q583Q1 as seed ortholog is 99%.

Group of orthologs #407. Best score 160 bits
Score difference with first non-orthologous sequence - T.annulata:160 T.brucei:160

Q4UDZ8              	100.00%		Q38CI4              	100.00%
                    	       		Q4GYQ5              	100.00%
Bootstrap support for Q4UDZ8 as seed ortholog is 100%.
Bootstrap support for Q38CI4 as seed ortholog is 100%.
Bootstrap support for Q4GYQ5 as seed ortholog is 100%.

Group of orthologs #408. Best score 160 bits
Score difference with first non-orthologous sequence - T.annulata:51 T.brucei:160

Q4UDF8              	100.00%		Q384B5              	100.00%
Bootstrap support for Q4UDF8 as seed ortholog is 87%.
Bootstrap support for Q384B5 as seed ortholog is 100%.

Group of orthologs #409. Best score 160 bits
Score difference with first non-orthologous sequence - T.annulata:160 T.brucei:160

Q4UAU6              	100.00%		Q57WF1              	100.00%
Bootstrap support for Q4UAU6 as seed ortholog is 100%.
Bootstrap support for Q57WF1 as seed ortholog is 100%.

Group of orthologs #410. Best score 160 bits
Score difference with first non-orthologous sequence - T.annulata:160 T.brucei:160

Q4UFH5              	100.00%		Q57XP3              	100.00%
Bootstrap support for Q4UFH5 as seed ortholog is 100%.
Bootstrap support for Q57XP3 as seed ortholog is 100%.

Group of orthologs #411. Best score 159 bits
Score difference with first non-orthologous sequence - T.annulata:159 T.brucei:159

Q4UBT8              	100.00%		Q38D26              	100.00%
Bootstrap support for Q4UBT8 as seed ortholog is 100%.
Bootstrap support for Q38D26 as seed ortholog is 100%.

Group of orthologs #412. Best score 159 bits
Score difference with first non-orthologous sequence - T.annulata:42 T.brucei:70

Q4UHU1              	100.00%		Q57WD6              	100.00%
Bootstrap support for Q4UHU1 as seed ortholog is 98%.
Bootstrap support for Q57WD6 as seed ortholog is 99%.

Group of orthologs #413. Best score 159 bits
Score difference with first non-orthologous sequence - T.annulata:159 T.brucei:159

Q4UI42              	100.00%		Q57ZM2              	100.00%
Bootstrap support for Q4UI42 as seed ortholog is 100%.
Bootstrap support for Q57ZM2 as seed ortholog is 100%.

Group of orthologs #414. Best score 158 bits
Score difference with first non-orthologous sequence - T.annulata:158 T.brucei:158

Q4UEC7              	100.00%		Q381H3              	100.00%
Bootstrap support for Q4UEC7 as seed ortholog is 100%.
Bootstrap support for Q381H3 as seed ortholog is 100%.

Group of orthologs #415. Best score 158 bits
Score difference with first non-orthologous sequence - T.annulata:158 T.brucei:158

Q4UE19              	100.00%		Q38DN9              	100.00%
Bootstrap support for Q4UE19 as seed ortholog is 100%.
Bootstrap support for Q38DN9 as seed ortholog is 100%.

Group of orthologs #416. Best score 157 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:157

Q4U8S7              	100.00%		Q583H3              	100.00%
Bootstrap support for Q4U8S7 as seed ortholog is 96%.
Bootstrap support for Q583H3 as seed ortholog is 100%.

Group of orthologs #417. Best score 156 bits
Score difference with first non-orthologous sequence - T.annulata:156 T.brucei:156

Q4UC41              	100.00%		Q387E5              	100.00%
Bootstrap support for Q4UC41 as seed ortholog is 100%.
Bootstrap support for Q387E5 as seed ortholog is 100%.

Group of orthologs #418. Best score 155 bits
Score difference with first non-orthologous sequence - T.annulata:155 T.brucei:24

Q4U9K9              	100.00%		Q57Z16              	100.00%
Bootstrap support for Q4U9K9 as seed ortholog is 100%.
Bootstrap support for Q57Z16 as seed ortholog is 73%.
Alternative seed ortholog is Q38AK7 (24 bits away from this cluster)

Group of orthologs #419. Best score 155 bits
Score difference with first non-orthologous sequence - T.annulata:155 T.brucei:155

Q4UD36              	100.00%		Q583K3              	100.00%
Bootstrap support for Q4UD36 as seed ortholog is 100%.
Bootstrap support for Q583K3 as seed ortholog is 100%.

Group of orthologs #420. Best score 155 bits
Score difference with first non-orthologous sequence - T.annulata:155 T.brucei:155

Q4UEX0              	100.00%		Q582M3              	100.00%
Bootstrap support for Q4UEX0 as seed ortholog is 100%.
Bootstrap support for Q582M3 as seed ortholog is 100%.

Group of orthologs #421. Best score 155 bits
Score difference with first non-orthologous sequence - T.annulata:39 T.brucei:155

Q4UED8              	100.00%		Q584V0              	100.00%
Bootstrap support for Q4UED8 as seed ortholog is 86%.
Bootstrap support for Q584V0 as seed ortholog is 100%.

Group of orthologs #422. Best score 154 bits
Score difference with first non-orthologous sequence - T.annulata:154 T.brucei:83

Q4UIT4              	100.00%		Q383W8              	100.00%
Bootstrap support for Q4UIT4 as seed ortholog is 100%.
Bootstrap support for Q383W8 as seed ortholog is 99%.

Group of orthologs #423. Best score 154 bits
Score difference with first non-orthologous sequence - T.annulata:154 T.brucei:154

Q4UIK7              	100.00%		Q386S6              	100.00%
Bootstrap support for Q4UIK7 as seed ortholog is 100%.
Bootstrap support for Q386S6 as seed ortholog is 100%.

Group of orthologs #424. Best score 154 bits
Score difference with first non-orthologous sequence - T.annulata:154 T.brucei:154

Q4UFE5              	100.00%		Q57U08              	100.00%
Bootstrap support for Q4UFE5 as seed ortholog is 100%.
Bootstrap support for Q57U08 as seed ortholog is 100%.

Group of orthologs #425. Best score 153 bits
Score difference with first non-orthologous sequence - T.annulata:52 T.brucei:153

Q4UCF7              	89.35%		Q585E2              	100.00%
Q4UCF6              	100.00%		Q585E3              	100.00%
Q4UCF4              	30.76%		Q585E8              	100.00%
Q4UCF2              	29.03%		Q585F0              	100.00%
Q4UCF1              	28.76%		Q585E5              	99.36%
P25781              	26.36%		
Q4UCF5              	26.10%		
Bootstrap support for Q4UCF6 as seed ortholog is 89%.
Bootstrap support for Q585E2 as seed ortholog is 100%.
Bootstrap support for Q585E3 as seed ortholog is 100%.
Bootstrap support for Q585E8 as seed ortholog is 100%.
Bootstrap support for Q585F0 as seed ortholog is 100%.

Group of orthologs #426. Best score 153 bits
Score difference with first non-orthologous sequence - T.annulata:153 T.brucei:153

Q4U9U5              	100.00%		Q38E30              	100.00%
Bootstrap support for Q4U9U5 as seed ortholog is 100%.
Bootstrap support for Q38E30 as seed ortholog is 100%.

Group of orthologs #427. Best score 153 bits
Score difference with first non-orthologous sequence - T.annulata:153 T.brucei:153

Q4UI79              	100.00%		Q38DL0              	100.00%
Bootstrap support for Q4UI79 as seed ortholog is 100%.
Bootstrap support for Q38DL0 as seed ortholog is 100%.

Group of orthologs #428. Best score 153 bits
Score difference with first non-orthologous sequence - T.annulata:153 T.brucei:153

Q4U9S6              	100.00%		Q585J5              	100.00%
Bootstrap support for Q4U9S6 as seed ortholog is 100%.
Bootstrap support for Q585J5 as seed ortholog is 100%.

Group of orthologs #429. Best score 153 bits
Score difference with first non-orthologous sequence - T.annulata:153 T.brucei:77

Q4UGQ2              	100.00%		Q582Q1              	100.00%
Bootstrap support for Q4UGQ2 as seed ortholog is 100%.
Bootstrap support for Q582Q1 as seed ortholog is 96%.

Group of orthologs #430. Best score 152 bits
Score difference with first non-orthologous sequence - T.annulata:152 T.brucei:152

Q4UFD5              	100.00%		P50885              	100.00%
Bootstrap support for Q4UFD5 as seed ortholog is 100%.
Bootstrap support for P50885 as seed ortholog is 100%.

Group of orthologs #431. Best score 151 bits
Score difference with first non-orthologous sequence - T.annulata:151 T.brucei:151

Q4UER3              	100.00%		Q583J6              	100.00%
                    	       		Q388N3              	8.38%
Bootstrap support for Q4UER3 as seed ortholog is 100%.
Bootstrap support for Q583J6 as seed ortholog is 100%.

Group of orthologs #432. Best score 151 bits
Score difference with first non-orthologous sequence - T.annulata:151 T.brucei:151

Q4U9C7              	100.00%		Q38B52              	100.00%
Bootstrap support for Q4U9C7 as seed ortholog is 100%.
Bootstrap support for Q38B52 as seed ortholog is 100%.

Group of orthologs #433. Best score 151 bits
Score difference with first non-orthologous sequence - T.annulata:151 T.brucei:151

Q4UDI9              	100.00%		Q38FA2              	100.00%
Bootstrap support for Q4UDI9 as seed ortholog is 100%.
Bootstrap support for Q38FA2 as seed ortholog is 100%.

Group of orthologs #434. Best score 151 bits
Score difference with first non-orthologous sequence - T.annulata:23 T.brucei:29

Q4UCA9              	100.00%		Q57XM0              	100.00%
Bootstrap support for Q4UCA9 as seed ortholog is 82%.
Bootstrap support for Q57XM0 as seed ortholog is 78%.

Group of orthologs #435. Best score 151 bits
Score difference with first non-orthologous sequence - T.annulata:151 T.brucei:151

Q4UA81              	100.00%		Q586G7              	100.00%
Bootstrap support for Q4UA81 as seed ortholog is 100%.
Bootstrap support for Q586G7 as seed ortholog is 100%.

Group of orthologs #436. Best score 150 bits
Score difference with first non-orthologous sequence - T.annulata:16 T.brucei:34

Q4UDJ9              	100.00%		Q57V67              	100.00%
                    	       		Q38CJ2              	16.51%
                    	       		Q57YQ0              	11.56%
                    	       		Q57WH3              	10.97%
                    	       		Q580P8              	10.50%
                    	       		Q580Q4              	9.43%
                    	       		Q57YR8              	8.96%
Bootstrap support for Q4UDJ9 as seed ortholog is 65%.
Alternative seed ortholog is Q4UE84 (16 bits away from this cluster)
Bootstrap support for Q57V67 as seed ortholog is 80%.

Group of orthologs #437. Best score 150 bits
Score difference with first non-orthologous sequence - T.annulata:150 T.brucei:150

Q4UFQ6              	100.00%		Q57XH7              	100.00%
Bootstrap support for Q4UFQ6 as seed ortholog is 100%.
Bootstrap support for Q57XH7 as seed ortholog is 100%.

Group of orthologs #438. Best score 150 bits
Score difference with first non-orthologous sequence - T.annulata:15 T.brucei:150

Q4UG55              	100.00%		Q57XV4              	100.00%
Bootstrap support for Q4UG55 as seed ortholog is 55%.
Alternative seed ortholog is Q4UGV3 (15 bits away from this cluster)
Bootstrap support for Q57XV4 as seed ortholog is 100%.

Group of orthologs #439. Best score 149 bits
Score difference with first non-orthologous sequence - T.annulata:149 T.brucei:149

Q4UCE4              	100.00%		Q38BS6              	100.00%
Bootstrap support for Q4UCE4 as seed ortholog is 100%.
Bootstrap support for Q38BS6 as seed ortholog is 100%.

Group of orthologs #440. Best score 149 bits
Score difference with first non-orthologous sequence - T.annulata:149 T.brucei:149

Q4U9R0              	100.00%		Q4GZ23              	100.00%
Bootstrap support for Q4U9R0 as seed ortholog is 100%.
Bootstrap support for Q4GZ23 as seed ortholog is 100%.

Group of orthologs #441. Best score 149 bits
Score difference with first non-orthologous sequence - T.annulata:149 T.brucei:149

Q4UB77              	100.00%		Q57WF3              	100.00%
Bootstrap support for Q4UB77 as seed ortholog is 100%.
Bootstrap support for Q57WF3 as seed ortholog is 100%.

Group of orthologs #442. Best score 148 bits
Score difference with first non-orthologous sequence - T.annulata:148 T.brucei:148

Q4UAV7              	100.00%		Q383A7              	100.00%
Bootstrap support for Q4UAV7 as seed ortholog is 100%.
Bootstrap support for Q383A7 as seed ortholog is 100%.

Group of orthologs #443. Best score 148 bits
Score difference with first non-orthologous sequence - T.annulata:148 T.brucei:148

Q4UAZ7              	100.00%		Q383Z3              	100.00%
Bootstrap support for Q4UAZ7 as seed ortholog is 100%.
Bootstrap support for Q383Z3 as seed ortholog is 100%.

Group of orthologs #444. Best score 148 bits
Score difference with first non-orthologous sequence - T.annulata:32 T.brucei:48

Q4UGG9              	100.00%		Q584G1              	100.00%
Bootstrap support for Q4UGG9 as seed ortholog is 94%.
Bootstrap support for Q584G1 as seed ortholog is 98%.

Group of orthologs #445. Best score 147 bits
Score difference with first non-orthologous sequence - T.annulata:147 T.brucei:147

Q4U9B7              	100.00%		Q385B0              	100.00%
                    	       		Q386R3              	31.44%
Bootstrap support for Q4U9B7 as seed ortholog is 100%.
Bootstrap support for Q385B0 as seed ortholog is 100%.

Group of orthologs #446. Best score 146 bits
Score difference with first non-orthologous sequence - T.annulata:85 T.brucei:146

Q4UB51              	100.00%		Q581A6              	100.00%
Bootstrap support for Q4UB51 as seed ortholog is 97%.
Bootstrap support for Q581A6 as seed ortholog is 100%.

Group of orthologs #447. Best score 146 bits
Score difference with first non-orthologous sequence - T.annulata:146 T.brucei:146

Q4U8L5              	100.00%		Q586H7              	100.00%
Bootstrap support for Q4U8L5 as seed ortholog is 100%.
Bootstrap support for Q586H7 as seed ortholog is 100%.

Group of orthologs #448. Best score 146 bits
Score difference with first non-orthologous sequence - T.annulata:146 T.brucei:146

Q4UJ58              	100.00%		Q57UR4              	100.00%
Bootstrap support for Q4UJ58 as seed ortholog is 100%.
Bootstrap support for Q57UR4 as seed ortholog is 100%.

Group of orthologs #449. Best score 145 bits
Score difference with first non-orthologous sequence - T.annulata:145 T.brucei:80

Q4U8G5              	100.00%		Q38F38              	100.00%
Bootstrap support for Q4U8G5 as seed ortholog is 100%.
Bootstrap support for Q38F38 as seed ortholog is 100%.

Group of orthologs #450. Best score 143 bits
Score difference with first non-orthologous sequence - T.annulata:143 T.brucei:143

Q4U8R2              	100.00%		Q383S8              	100.00%
Bootstrap support for Q4U8R2 as seed ortholog is 100%.
Bootstrap support for Q383S8 as seed ortholog is 100%.

Group of orthologs #451. Best score 143 bits
Score difference with first non-orthologous sequence - T.annulata:143 T.brucei:96

Q4UD32              	100.00%		Q386I0              	100.00%
Bootstrap support for Q4UD32 as seed ortholog is 100%.
Bootstrap support for Q386I0 as seed ortholog is 99%.

Group of orthologs #452. Best score 143 bits
Score difference with first non-orthologous sequence - T.annulata:9 T.brucei:16

Q4UHG9              	100.00%		Q385W0              	100.00%
Bootstrap support for Q4UHG9 as seed ortholog is 59%.
Alternative seed ortholog is Q4U9A2 (9 bits away from this cluster)
Bootstrap support for Q385W0 as seed ortholog is 73%.
Alternative seed ortholog is Q382G2 (16 bits away from this cluster)

Group of orthologs #453. Best score 142 bits
Score difference with first non-orthologous sequence - T.annulata:142 T.brucei:142

Q4UDC6              	100.00%		Q384W3              	100.00%
                    	       		Q384W5              	97.80%
Bootstrap support for Q4UDC6 as seed ortholog is 100%.
Bootstrap support for Q384W3 as seed ortholog is 100%.

Group of orthologs #454. Best score 142 bits
Score difference with first non-orthologous sequence - T.annulata:142 T.brucei:71

Q4UAM4              	100.00%		Q381H0              	100.00%
Bootstrap support for Q4UAM4 as seed ortholog is 100%.
Bootstrap support for Q381H0 as seed ortholog is 99%.

Group of orthologs #455. Best score 142 bits
Score difference with first non-orthologous sequence - T.annulata:142 T.brucei:142

Q4U9X9              	100.00%		Q584D1              	100.00%
Bootstrap support for Q4U9X9 as seed ortholog is 100%.
Bootstrap support for Q584D1 as seed ortholog is 100%.

Group of orthologs #456. Best score 141 bits
Score difference with first non-orthologous sequence - T.annulata:141 T.brucei:20

Q4U9Y6              	100.00%		Q4GYX7              	100.00%
Q4UCS5              	100.00%		
Bootstrap support for Q4U9Y6 as seed ortholog is 100%.
Bootstrap support for Q4UCS5 as seed ortholog is 100%.
Bootstrap support for Q4GYX7 as seed ortholog is 85%.

Group of orthologs #457. Best score 141 bits
Score difference with first non-orthologous sequence - T.annulata:141 T.brucei:141

Q4U8J8              	100.00%		Q382P1              	100.00%
Bootstrap support for Q4U8J8 as seed ortholog is 100%.
Bootstrap support for Q382P1 as seed ortholog is 100%.

Group of orthologs #458. Best score 141 bits
Score difference with first non-orthologous sequence - T.annulata:141 T.brucei:141

Q4UBJ2              	100.00%		Q382Y6              	100.00%
Bootstrap support for Q4UBJ2 as seed ortholog is 100%.
Bootstrap support for Q382Y6 as seed ortholog is 100%.

Group of orthologs #459. Best score 141 bits
Score difference with first non-orthologous sequence - T.annulata:141 T.brucei:141

Q4UBG2              	100.00%		Q385K3              	100.00%
Bootstrap support for Q4UBG2 as seed ortholog is 100%.
Bootstrap support for Q385K3 as seed ortholog is 100%.

Group of orthologs #460. Best score 141 bits
Score difference with first non-orthologous sequence - T.annulata:141 T.brucei:141

Q4UEB4              	100.00%		Q381R8              	100.00%
Bootstrap support for Q4UEB4 as seed ortholog is 100%.
Bootstrap support for Q381R8 as seed ortholog is 100%.

Group of orthologs #461. Best score 140 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:140

Q4U8H5              	100.00%		Q381V7              	100.00%
Bootstrap support for Q4U8H5 as seed ortholog is 100%.
Bootstrap support for Q381V7 as seed ortholog is 100%.

Group of orthologs #462. Best score 140 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:140

Q4UEH9              	100.00%		Q38A09              	100.00%
Bootstrap support for Q4UEH9 as seed ortholog is 100%.
Bootstrap support for Q38A09 as seed ortholog is 100%.

Group of orthologs #463. Best score 140 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:140

Q4UG04              	100.00%		Q38B94              	100.00%
Bootstrap support for Q4UG04 as seed ortholog is 100%.
Bootstrap support for Q38B94 as seed ortholog is 100%.

Group of orthologs #464. Best score 140 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:140

Q4UBH5              	100.00%		Q57XC9              	100.00%
Bootstrap support for Q4UBH5 as seed ortholog is 100%.
Bootstrap support for Q57XC9 as seed ortholog is 100%.

Group of orthologs #465. Best score 140 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:140

Q4UHP1              	100.00%		Q38FR2              	100.00%
Bootstrap support for Q4UHP1 as seed ortholog is 100%.
Bootstrap support for Q38FR2 as seed ortholog is 100%.

Group of orthologs #466. Best score 140 bits
Score difference with first non-orthologous sequence - T.annulata:140 T.brucei:140

Q4UGE8              	100.00%		Q57VV0              	100.00%
Bootstrap support for Q4UGE8 as seed ortholog is 100%.
Bootstrap support for Q57VV0 as seed ortholog is 100%.

Group of orthologs #467. Best score 139 bits
Score difference with first non-orthologous sequence - T.annulata:139 T.brucei:139

Q4U8S3              	100.00%		Q38D25              	100.00%
                    	       		Q57YL9              	100.00%
Bootstrap support for Q4U8S3 as seed ortholog is 100%.
Bootstrap support for Q38D25 as seed ortholog is 100%.
Bootstrap support for Q57YL9 as seed ortholog is 100%.

Group of orthologs #468. Best score 139 bits
Score difference with first non-orthologous sequence - T.annulata:57 T.brucei:57

Q4U8F2              	100.00%		Q382B7              	100.00%
Bootstrap support for Q4U8F2 as seed ortholog is 99%.
Bootstrap support for Q382B7 as seed ortholog is 99%.

Group of orthologs #469. Best score 139 bits
Score difference with first non-orthologous sequence - T.annulata:139 T.brucei:139

Q4U9E4              	100.00%		Q38DL8              	100.00%
Bootstrap support for Q4U9E4 as seed ortholog is 100%.
Bootstrap support for Q38DL8 as seed ortholog is 100%.

Group of orthologs #470. Best score 139 bits
Score difference with first non-orthologous sequence - T.annulata:139 T.brucei:139

Q4UGN4              	100.00%		Q585D9              	100.00%
Bootstrap support for Q4UGN4 as seed ortholog is 100%.
Bootstrap support for Q585D9 as seed ortholog is 100%.

Group of orthologs #471. Best score 137 bits
Score difference with first non-orthologous sequence - T.annulata:137 T.brucei:137

Q4UDF3              	100.00%		Q4FKD4              	100.00%
                    	       		Q580D8              	100.00%
Bootstrap support for Q4UDF3 as seed ortholog is 100%.
Bootstrap support for Q4FKD4 as seed ortholog is 100%.
Bootstrap support for Q580D8 as seed ortholog is 100%.

Group of orthologs #472. Best score 137 bits
Score difference with first non-orthologous sequence - T.annulata:137 T.brucei:137

Q4UC11              	100.00%		Q382E4              	100.00%
Bootstrap support for Q4UC11 as seed ortholog is 100%.
Bootstrap support for Q382E4 as seed ortholog is 100%.

Group of orthologs #473. Best score 137 bits
Score difference with first non-orthologous sequence - T.annulata:137 T.brucei:137

Q4U9U3              	100.00%		Q57YH3              	100.00%
Bootstrap support for Q4U9U3 as seed ortholog is 100%.
Bootstrap support for Q57YH3 as seed ortholog is 100%.

Group of orthologs #474. Best score 137 bits
Score difference with first non-orthologous sequence - T.annulata:13 T.brucei:31

Q4UIK6              	100.00%		Q57WZ6              	100.00%
Bootstrap support for Q4UIK6 as seed ortholog is 60%.
Alternative seed ortholog is Q4UCI2 (13 bits away from this cluster)
Bootstrap support for Q57WZ6 as seed ortholog is 77%.

Group of orthologs #475. Best score 136 bits
Score difference with first non-orthologous sequence - T.annulata:136 T.brucei:136

Q4UBZ5              	100.00%		D6XEX9              	100.00%
Bootstrap support for Q4UBZ5 as seed ortholog is 100%.
Bootstrap support for D6XEX9 as seed ortholog is 100%.

Group of orthologs #476. Best score 136 bits
Score difference with first non-orthologous sequence - T.annulata:136 T.brucei:136

Q4UF90              	100.00%		Q57UQ2              	100.00%
Bootstrap support for Q4UF90 as seed ortholog is 100%.
Bootstrap support for Q57UQ2 as seed ortholog is 100%.

Group of orthologs #477. Best score 135 bits
Score difference with first non-orthologous sequence - T.annulata:135 T.brucei:135

Q4UFD7              	100.00%		Q382C4              	100.00%
Bootstrap support for Q4UFD7 as seed ortholog is 100%.
Bootstrap support for Q382C4 as seed ortholog is 100%.

Group of orthologs #478. Best score 135 bits
Score difference with first non-orthologous sequence - T.annulata:135 T.brucei:135

Q4UC05              	100.00%		Q584V6              	100.00%
Bootstrap support for Q4UC05 as seed ortholog is 100%.
Bootstrap support for Q584V6 as seed ortholog is 100%.

Group of orthologs #479. Best score 134 bits
Score difference with first non-orthologous sequence - T.annulata:134 T.brucei:134

Q4U9X7              	100.00%		Q57UJ7              	100.00%
Bootstrap support for Q4U9X7 as seed ortholog is 100%.
Bootstrap support for Q57UJ7 as seed ortholog is 100%.

Group of orthologs #480. Best score 134 bits
Score difference with first non-orthologous sequence - T.annulata:46 T.brucei:134

Q4UC22              	100.00%		Q57WS0              	100.00%
Bootstrap support for Q4UC22 as seed ortholog is 87%.
Bootstrap support for Q57WS0 as seed ortholog is 100%.

Group of orthologs #481. Best score 134 bits
Score difference with first non-orthologous sequence - T.annulata:134 T.brucei:134

Q4UFY3              	100.00%		Q580I2              	100.00%
Bootstrap support for Q4UFY3 as seed ortholog is 100%.
Bootstrap support for Q580I2 as seed ortholog is 100%.

Group of orthologs #482. Best score 133 bits
Score difference with first non-orthologous sequence - T.annulata:133 T.brucei:43

Q4UDU6              	100.00%		Q38EA7              	100.00%
                    	       		Q38FS2              	5.63%
Bootstrap support for Q4UDU6 as seed ortholog is 100%.
Bootstrap support for Q38EA7 as seed ortholog is 93%.

Group of orthologs #483. Best score 133 bits
Score difference with first non-orthologous sequence - T.annulata:133 T.brucei:47

Q4U913              	100.00%		Q38C61              	100.00%
Bootstrap support for Q4U913 as seed ortholog is 100%.
Bootstrap support for Q38C61 as seed ortholog is 96%.

Group of orthologs #484. Best score 133 bits
Score difference with first non-orthologous sequence - T.annulata:133 T.brucei:133

Q4UA41              	100.00%		Q57VD2              	100.00%
Bootstrap support for Q4UA41 as seed ortholog is 100%.
Bootstrap support for Q57VD2 as seed ortholog is 100%.

Group of orthologs #485. Best score 133 bits
Score difference with first non-orthologous sequence - T.annulata:133 T.brucei:76

Q4UA18              	100.00%		Q57VV4              	100.00%
Bootstrap support for Q4UA18 as seed ortholog is 100%.
Bootstrap support for Q57VV4 as seed ortholog is 97%.

Group of orthologs #486. Best score 131 bits
Score difference with first non-orthologous sequence - T.annulata:131 T.brucei:131

Q4U8S2              	100.00%		Q57W63              	100.00%
Bootstrap support for Q4U8S2 as seed ortholog is 100%.
Bootstrap support for Q57W63 as seed ortholog is 100%.

Group of orthologs #487. Best score 131 bits
Score difference with first non-orthologous sequence - T.annulata:131 T.brucei:131

Q4U9W9              	100.00%		Q57WW3              	100.00%
Bootstrap support for Q4U9W9 as seed ortholog is 100%.
Bootstrap support for Q57WW3 as seed ortholog is 100%.

Group of orthologs #488. Best score 131 bits
Score difference with first non-orthologous sequence - T.annulata:72 T.brucei:131

Q4UEA0              	100.00%		Q57UI4              	100.00%
Bootstrap support for Q4UEA0 as seed ortholog is 99%.
Bootstrap support for Q57UI4 as seed ortholog is 100%.

Group of orthologs #489. Best score 130 bits
Score difference with first non-orthologous sequence - T.annulata:6 T.brucei:74

Q4UGU1              	100.00%		Q38A97              	100.00%
                    	       		Q38A99              	14.84%
Bootstrap support for Q4UGU1 as seed ortholog is 56%.
Alternative seed ortholog is Q4UCH6 (6 bits away from this cluster)
Bootstrap support for Q38A97 as seed ortholog is 94%.

Group of orthologs #490. Best score 130 bits
Score difference with first non-orthologous sequence - T.annulata:130 T.brucei:130

Q4UAB5              	100.00%		Q57XR8              	100.00%
Bootstrap support for Q4UAB5 as seed ortholog is 100%.
Bootstrap support for Q57XR8 as seed ortholog is 100%.

Group of orthologs #491. Best score 129 bits
Score difference with first non-orthologous sequence - T.annulata:129 T.brucei:129

Q4UEJ4              	100.00%		Q38BM3              	100.00%
Bootstrap support for Q4UEJ4 as seed ortholog is 100%.
Bootstrap support for Q38BM3 as seed ortholog is 100%.

Group of orthologs #492. Best score 129 bits
Score difference with first non-orthologous sequence - T.annulata:129 T.brucei:129

Q4UI77              	100.00%		Q387H6              	100.00%
Bootstrap support for Q4UI77 as seed ortholog is 100%.
Bootstrap support for Q387H6 as seed ortholog is 100%.

Group of orthologs #493. Best score 129 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4UHV3              	100.00%		Q388H6              	100.00%
Bootstrap support for Q4UHV3 as seed ortholog is 93%.
Bootstrap support for Q388H6 as seed ortholog is 95%.

Group of orthologs #494. Best score 128 bits
Score difference with first non-orthologous sequence - T.annulata:128 T.brucei:128

Q4UE06              	100.00%		Q38BI8              	100.00%
                    	       		Q38BI9              	100.00%
Bootstrap support for Q4UE06 as seed ortholog is 100%.
Bootstrap support for Q38BI8 as seed ortholog is 100%.
Bootstrap support for Q38BI9 as seed ortholog is 100%.

Group of orthologs #495. Best score 128 bits
Score difference with first non-orthologous sequence - T.annulata:128 T.brucei:128

Q4UB99              	100.00%		Q57ZH1              	100.00%
                    	       		Q57ZH2              	100.00%
Bootstrap support for Q4UB99 as seed ortholog is 100%.
Bootstrap support for Q57ZH1 as seed ortholog is 100%.
Bootstrap support for Q57ZH2 as seed ortholog is 100%.

Group of orthologs #496. Best score 128 bits
Score difference with first non-orthologous sequence - T.annulata:128 T.brucei:128

Q4UEK0              	100.00%		Q385V6              	100.00%
Bootstrap support for Q4UEK0 as seed ortholog is 100%.
Bootstrap support for Q385V6 as seed ortholog is 100%.

Group of orthologs #497. Best score 127 bits
Score difference with first non-orthologous sequence - T.annulata:127 T.brucei:127

Q4U907              	100.00%		Q57Z31              	100.00%
                    	       		Q587H6              	61.19%
Bootstrap support for Q4U907 as seed ortholog is 100%.
Bootstrap support for Q57Z31 as seed ortholog is 100%.

Group of orthologs #498. Best score 126 bits
Score difference with first non-orthologous sequence - T.annulata:126 T.brucei:126

Q4U9H7              	100.00%		Q382L7              	100.00%
                    	       		Q382M7              	100.00%
Bootstrap support for Q4U9H7 as seed ortholog is 100%.
Bootstrap support for Q382L7 as seed ortholog is 100%.
Bootstrap support for Q382M7 as seed ortholog is 100%.

Group of orthologs #499. Best score 126 bits
Score difference with first non-orthologous sequence - T.annulata:126 T.brucei:126

Q4UBJ8              	100.00%		Q383Y0              	100.00%
Bootstrap support for Q4UBJ8 as seed ortholog is 100%.
Bootstrap support for Q383Y0 as seed ortholog is 100%.

Group of orthologs #500. Best score 126 bits
Score difference with first non-orthologous sequence - T.annulata:126 T.brucei:126

Q4U8V4              	100.00%		Q38AD5              	100.00%
Bootstrap support for Q4U8V4 as seed ortholog is 100%.
Bootstrap support for Q38AD5 as seed ortholog is 100%.

Group of orthologs #501. Best score 125 bits
Score difference with first non-orthologous sequence - T.annulata:42 T.brucei:125

Q4UG91              	100.00%		Q38FF7              	100.00%
Bootstrap support for Q4UG91 as seed ortholog is 84%.
Bootstrap support for Q38FF7 as seed ortholog is 100%.

Group of orthologs #502. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:124

Q4UBP7              	100.00%		Q57WS9              	100.00%
                    	       		Q57WT1              	9.50%
Bootstrap support for Q4UBP7 as seed ortholog is 81%.
Bootstrap support for Q57WS9 as seed ortholog is 100%.

Group of orthologs #503. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UGE7              	100.00%		Q57V54              	100.00%
                    	       		Q57V55              	100.00%
Bootstrap support for Q4UGE7 as seed ortholog is 100%.
Bootstrap support for Q57V54 as seed ortholog is 100%.
Bootstrap support for Q57V55 as seed ortholog is 100%.

Group of orthologs #504. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:36

Q4UI24              	100.00%		Q583J8              	100.00%
                    	       		Q384I1              	5.91%
Bootstrap support for Q4UI24 as seed ortholog is 100%.
Bootstrap support for Q583J8 as seed ortholog is 77%.

Group of orthologs #505. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UAP1              	100.00%		Q384W1              	100.00%
Bootstrap support for Q4UAP1 as seed ortholog is 100%.
Bootstrap support for Q384W1 as seed ortholog is 100%.

Group of orthologs #506. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:40

Q4U9Y1              	100.00%		Q389Q0              	100.00%
Bootstrap support for Q4U9Y1 as seed ortholog is 100%.
Bootstrap support for Q389Q0 as seed ortholog is 85%.

Group of orthologs #507. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UIB7              	100.00%		Q38CA8              	100.00%
Bootstrap support for Q4UIB7 as seed ortholog is 100%.
Bootstrap support for Q38CA8 as seed ortholog is 100%.

Group of orthologs #508. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:33

Q4UGH5              	100.00%		Q4FKD8              	100.00%
Bootstrap support for Q4UGH5 as seed ortholog is 100%.
Bootstrap support for Q4FKD8 as seed ortholog is 98%.

Group of orthologs #509. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UGR5              	100.00%		Q57UH5              	100.00%
Bootstrap support for Q4UGR5 as seed ortholog is 100%.
Bootstrap support for Q57UH5 as seed ortholog is 100%.

Group of orthologs #510. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UIX7              	100.00%		Q57U85              	100.00%
Bootstrap support for Q4UIX7 as seed ortholog is 100%.
Bootstrap support for Q57U85 as seed ortholog is 100%.

Group of orthologs #511. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UCX0              	100.00%		Q584T6              	100.00%
Bootstrap support for Q4UCX0 as seed ortholog is 100%.
Bootstrap support for Q584T6 as seed ortholog is 100%.

Group of orthologs #512. Best score 124 bits
Score difference with first non-orthologous sequence - T.annulata:124 T.brucei:124

Q4UGX9              	100.00%		Q580N6              	100.00%
Bootstrap support for Q4UGX9 as seed ortholog is 100%.
Bootstrap support for Q580N6 as seed ortholog is 100%.

Group of orthologs #513. Best score 123 bits
Score difference with first non-orthologous sequence - T.annulata:123 T.brucei:74

Q4UBG4              	100.00%		Q38AS9              	100.00%
Bootstrap support for Q4UBG4 as seed ortholog is 100%.
Bootstrap support for Q38AS9 as seed ortholog is 95%.

Group of orthologs #514. Best score 123 bits
Score difference with first non-orthologous sequence - T.annulata:27 T.brucei:54

Q4UFZ3              	100.00%		Q580S5              	100.00%
Bootstrap support for Q4UFZ3 as seed ortholog is 76%.
Bootstrap support for Q580S5 as seed ortholog is 82%.

Group of orthologs #515. Best score 123 bits
Score difference with first non-orthologous sequence - T.annulata:123 T.brucei:123

Q4UF20              	100.00%		Q583P0              	100.00%
Bootstrap support for Q4UF20 as seed ortholog is 100%.
Bootstrap support for Q583P0 as seed ortholog is 100%.

Group of orthologs #516. Best score 122 bits
Score difference with first non-orthologous sequence - T.annulata:122 T.brucei:122

Q4U8P6              	100.00%		Q382A8              	100.00%
Bootstrap support for Q4U8P6 as seed ortholog is 100%.
Bootstrap support for Q382A8 as seed ortholog is 100%.

Group of orthologs #517. Best score 122 bits
Score difference with first non-orthologous sequence - T.annulata:122 T.brucei:122

Q4UIG2              	100.00%		Q584D9              	100.00%
Bootstrap support for Q4UIG2 as seed ortholog is 100%.
Bootstrap support for Q584D9 as seed ortholog is 100%.

Group of orthologs #518. Best score 121 bits
Score difference with first non-orthologous sequence - T.annulata:121 T.brucei:121

Q4UCL2              	100.00%		Q385D3              	100.00%
Bootstrap support for Q4UCL2 as seed ortholog is 100%.
Bootstrap support for Q385D3 as seed ortholog is 100%.

Group of orthologs #519. Best score 121 bits
Score difference with first non-orthologous sequence - T.annulata:121 T.brucei:121

Q4UEV0              	100.00%		Q389Q8              	100.00%
Bootstrap support for Q4UEV0 as seed ortholog is 100%.
Bootstrap support for Q389Q8 as seed ortholog is 100%.

Group of orthologs #520. Best score 121 bits
Score difference with first non-orthologous sequence - T.annulata:121 T.brucei:121

Q4UB74              	100.00%		Q57X10              	100.00%
Bootstrap support for Q4UB74 as seed ortholog is 100%.
Bootstrap support for Q57X10 as seed ortholog is 100%.

Group of orthologs #521. Best score 121 bits
Score difference with first non-orthologous sequence - T.annulata:121 T.brucei:121

Q4U9Y2              	100.00%		Q57ZX8              	100.00%
Bootstrap support for Q4U9Y2 as seed ortholog is 100%.
Bootstrap support for Q57ZX8 as seed ortholog is 100%.

Group of orthologs #522. Best score 121 bits
Score difference with first non-orthologous sequence - T.annulata:77 T.brucei:47

Q4UEW0              	100.00%		Q57ZL4              	100.00%
Bootstrap support for Q4UEW0 as seed ortholog is 96%.
Bootstrap support for Q57ZL4 as seed ortholog is 85%.

Group of orthologs #523. Best score 120 bits
Score difference with first non-orthologous sequence - T.annulata:120 T.brucei:120

Q4UIX5              	100.00%		Q582B0              	100.00%
Bootstrap support for Q4UIX5 as seed ortholog is 100%.
Bootstrap support for Q582B0 as seed ortholog is 100%.

Group of orthologs #524. Best score 119 bits
Score difference with first non-orthologous sequence - T.annulata:119 T.brucei:119

Q4UCL0              	100.00%		Q385F6              	100.00%
Bootstrap support for Q4UCL0 as seed ortholog is 100%.
Bootstrap support for Q385F6 as seed ortholog is 100%.

Group of orthologs #525. Best score 119 bits
Score difference with first non-orthologous sequence - T.annulata:119 T.brucei:119

Q4UA42              	100.00%		Q38AM9              	100.00%
Bootstrap support for Q4UA42 as seed ortholog is 100%.
Bootstrap support for Q38AM9 as seed ortholog is 100%.

Group of orthologs #526. Best score 119 bits
Score difference with first non-orthologous sequence - T.annulata:17 T.brucei:3

Q4UDP1              	100.00%		Q57WC8              	100.00%
Bootstrap support for Q4UDP1 as seed ortholog is 54%.
Alternative seed ortholog is Q4UAH4 (17 bits away from this cluster)
Bootstrap support for Q57WC8 as seed ortholog is 51%.
Alternative seed ortholog is Q384J7 (3 bits away from this cluster)

Group of orthologs #527. Best score 118 bits
Score difference with first non-orthologous sequence - T.annulata:118 T.brucei:118

Q4UHS9              	100.00%		Q384L4              	100.00%
Bootstrap support for Q4UHS9 as seed ortholog is 100%.
Bootstrap support for Q384L4 as seed ortholog is 100%.

Group of orthologs #528. Best score 118 bits
Score difference with first non-orthologous sequence - T.annulata:118 T.brucei:73

Q4UIY1              	100.00%		Q38BA3              	100.00%
Bootstrap support for Q4UIY1 as seed ortholog is 100%.
Bootstrap support for Q38BA3 as seed ortholog is 87%.

Group of orthologs #529. Best score 118 bits
Score difference with first non-orthologous sequence - T.annulata:118 T.brucei:41

Q4UDS4              	100.00%		Q586V8              	100.00%
Bootstrap support for Q4UDS4 as seed ortholog is 100%.
Bootstrap support for Q586V8 as seed ortholog is 82%.

Group of orthologs #530. Best score 117 bits
Score difference with first non-orthologous sequence - T.annulata:117 T.brucei:117

Q4U8E1              	100.00%		Q38D40              	100.00%
Bootstrap support for Q4U8E1 as seed ortholog is 100%.
Bootstrap support for Q38D40 as seed ortholog is 100%.

Group of orthologs #531. Best score 117 bits
Score difference with first non-orthologous sequence - T.annulata:117 T.brucei:117

Q4UIY3              	100.00%		Q57YH9              	100.00%
Bootstrap support for Q4UIY3 as seed ortholog is 100%.
Bootstrap support for Q57YH9 as seed ortholog is 100%.

Group of orthologs #532. Best score 116 bits
Score difference with first non-orthologous sequence - T.annulata:116 T.brucei:54

Q4U8P3              	100.00%		Q57YF8              	100.00%
Bootstrap support for Q4U8P3 as seed ortholog is 100%.
Bootstrap support for Q57YF8 as seed ortholog is 99%.

Group of orthologs #533. Best score 116 bits
Score difference with first non-orthologous sequence - T.annulata:116 T.brucei:116

Q4UGV7              	100.00%		Q38E77              	100.00%
Bootstrap support for Q4UGV7 as seed ortholog is 100%.
Bootstrap support for Q38E77 as seed ortholog is 100%.

Group of orthologs #534. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:115 T.brucei:115

Q4U9I5              	100.00%		D7SG81              	100.00%
Bootstrap support for Q4U9I5 as seed ortholog is 100%.
Bootstrap support for D7SG81 as seed ortholog is 100%.

Group of orthologs #535. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:115 T.brucei:115

Q4U8E3              	100.00%		Q388R5              	100.00%
Bootstrap support for Q4U8E3 as seed ortholog is 100%.
Bootstrap support for Q388R5 as seed ortholog is 100%.

Group of orthologs #536. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:115 T.brucei:115

Q4UGI3              	100.00%		Q383N1              	100.00%
Bootstrap support for Q4UGI3 as seed ortholog is 100%.
Bootstrap support for Q383N1 as seed ortholog is 100%.

Group of orthologs #537. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:115 T.brucei:115

Q4UAZ5              	100.00%		Q57Z71              	100.00%
Bootstrap support for Q4UAZ5 as seed ortholog is 100%.
Bootstrap support for Q57Z71 as seed ortholog is 100%.

Group of orthologs #538. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:115 T.brucei:59

Q4UCL6              	100.00%		Q585U7              	100.00%
Bootstrap support for Q4UCL6 as seed ortholog is 100%.
Bootstrap support for Q585U7 as seed ortholog is 88%.

Group of orthologs #539. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:115 T.brucei:115

Q4UER7              	100.00%		Q585C1              	100.00%
Bootstrap support for Q4UER7 as seed ortholog is 100%.
Bootstrap support for Q585C1 as seed ortholog is 100%.

Group of orthologs #540. Best score 115 bits
Score difference with first non-orthologous sequence - T.annulata:56 T.brucei:115

Q4UIW6              	100.00%		Q585M8              	100.00%
Bootstrap support for Q4UIW6 as seed ortholog is 92%.
Bootstrap support for Q585M8 as seed ortholog is 100%.

Group of orthologs #541. Best score 114 bits
Score difference with first non-orthologous sequence - T.annulata:114 T.brucei:114

Q4UIR3              	100.00%		Q385N3              	100.00%
Q4UCZ9              	60.42%		
Q4UD00              	59.56%		
Bootstrap support for Q4UIR3 as seed ortholog is 100%.
Bootstrap support for Q385N3 as seed ortholog is 100%.

Group of orthologs #542. Best score 113 bits
Score difference with first non-orthologous sequence - T.annulata:113 T.brucei:113

Q4UDS7              	100.00%		Q57WJ9              	100.00%
                    	       		Q57Y02              	42.96%
Bootstrap support for Q4UDS7 as seed ortholog is 100%.
Bootstrap support for Q57WJ9 as seed ortholog is 100%.

Group of orthologs #543. Best score 113 bits
Score difference with first non-orthologous sequence - T.annulata:113 T.brucei:113

Q4UAP4              	100.00%		Q383A8              	100.00%
Bootstrap support for Q4UAP4 as seed ortholog is 100%.
Bootstrap support for Q383A8 as seed ortholog is 100%.

Group of orthologs #544. Best score 113 bits
Score difference with first non-orthologous sequence - T.annulata:113 T.brucei:113

Q4UDY6              	100.00%		Q582A2              	100.00%
Bootstrap support for Q4UDY6 as seed ortholog is 100%.
Bootstrap support for Q582A2 as seed ortholog is 100%.

Group of orthologs #545. Best score 112 bits
Score difference with first non-orthologous sequence - T.annulata:112 T.brucei:112

Q4UCR4              	100.00%		Q389R3              	100.00%
Bootstrap support for Q4UCR4 as seed ortholog is 100%.
Bootstrap support for Q389R3 as seed ortholog is 100%.

Group of orthologs #546. Best score 112 bits
Score difference with first non-orthologous sequence - T.annulata:50 T.brucei:40

Q4UC09              	100.00%		Q38DS0              	100.00%
Bootstrap support for Q4UC09 as seed ortholog is 95%.
Bootstrap support for Q38DS0 as seed ortholog is 84%.

Group of orthologs #547. Best score 112 bits
Score difference with first non-orthologous sequence - T.annulata:53 T.brucei:28

Q4UC89              	100.00%		Q38DM0              	100.00%
Bootstrap support for Q4UC89 as seed ortholog is 94%.
Bootstrap support for Q38DM0 as seed ortholog is 81%.

Group of orthologs #548. Best score 112 bits
Score difference with first non-orthologous sequence - T.annulata:19 T.brucei:112

Q4UED9              	100.00%		Q57UC1              	100.00%
Bootstrap support for Q4UED9 as seed ortholog is 67%.
Alternative seed ortholog is Q4UHP3 (19 bits away from this cluster)
Bootstrap support for Q57UC1 as seed ortholog is 100%.

Group of orthologs #549. Best score 111 bits
Score difference with first non-orthologous sequence - T.annulata:111 T.brucei:40

Q4UFQ3              	100.00%		Q38A69              	100.00%
Bootstrap support for Q4UFQ3 as seed ortholog is 100%.
Bootstrap support for Q38A69 as seed ortholog is 84%.

Group of orthologs #550. Best score 111 bits
Score difference with first non-orthologous sequence - T.annulata:111 T.brucei:111

Q4UGD6              	100.00%		Q38BD0              	100.00%
Bootstrap support for Q4UGD6 as seed ortholog is 100%.
Bootstrap support for Q38BD0 as seed ortholog is 100%.

Group of orthologs #551. Best score 110 bits
Score difference with first non-orthologous sequence - T.annulata:110 T.brucei:110

Q4UB66              	100.00%		Q38BW8              	100.00%
Bootstrap support for Q4UB66 as seed ortholog is 100%.
Bootstrap support for Q38BW8 as seed ortholog is 100%.

Group of orthologs #552. Best score 110 bits
Score difference with first non-orthologous sequence - T.annulata:110 T.brucei:110

Q4UC70              	100.00%		Q38AW9              	100.00%
Bootstrap support for Q4UC70 as seed ortholog is 100%.
Bootstrap support for Q38AW9 as seed ortholog is 100%.

Group of orthologs #553. Best score 110 bits
Score difference with first non-orthologous sequence - T.annulata:110 T.brucei:110

Q4UDP6              	100.00%		Q38DV8              	100.00%
Bootstrap support for Q4UDP6 as seed ortholog is 100%.
Bootstrap support for Q38DV8 as seed ortholog is 100%.

Group of orthologs #554. Best score 109 bits
Score difference with first non-orthologous sequence - T.annulata:109 T.brucei:109

Q4UB88              	100.00%		Q389X7              	100.00%
Bootstrap support for Q4UB88 as seed ortholog is 100%.
Bootstrap support for Q389X7 as seed ortholog is 100%.

Group of orthologs #555. Best score 109 bits
Score difference with first non-orthologous sequence - T.annulata:109 T.brucei:109

Q4UFQ0              	100.00%		Q385R6              	100.00%
Bootstrap support for Q4UFQ0 as seed ortholog is 100%.
Bootstrap support for Q385R6 as seed ortholog is 100%.

Group of orthologs #556. Best score 108 bits
Score difference with first non-orthologous sequence - T.annulata:108 T.brucei:108

Q4U923              	100.00%		Q389M0              	100.00%
Bootstrap support for Q4U923 as seed ortholog is 100%.
Bootstrap support for Q389M0 as seed ortholog is 100%.

Group of orthologs #557. Best score 108 bits
Score difference with first non-orthologous sequence - T.annulata:108 T.brucei:108

Q4UDV1              	100.00%		Q38BD7              	100.00%
Bootstrap support for Q4UDV1 as seed ortholog is 100%.
Bootstrap support for Q38BD7 as seed ortholog is 100%.

Group of orthologs #558. Best score 108 bits
Score difference with first non-orthologous sequence - T.annulata:108 T.brucei:108

Q4U9Y5              	100.00%		Q57YA3              	100.00%
Bootstrap support for Q4U9Y5 as seed ortholog is 100%.
Bootstrap support for Q57YA3 as seed ortholog is 100%.

Group of orthologs #559. Best score 108 bits
Score difference with first non-orthologous sequence - T.annulata:108 T.brucei:108

Q4UGP1              	100.00%		Q57YW0              	100.00%
Bootstrap support for Q4UGP1 as seed ortholog is 100%.
Bootstrap support for Q57YW0 as seed ortholog is 100%.

Group of orthologs #560. Best score 107 bits
Score difference with first non-orthologous sequence - T.annulata:107 T.brucei:107

Q4UGR4              	100.00%		Q383J3              	100.00%
Bootstrap support for Q4UGR4 as seed ortholog is 100%.
Bootstrap support for Q383J3 as seed ortholog is 100%.

Group of orthologs #561. Best score 106 bits
Score difference with first non-orthologous sequence - T.annulata:106 T.brucei:106

Q4UDA1              	100.00%		Q388J5              	100.00%
Bootstrap support for Q4UDA1 as seed ortholog is 100%.
Bootstrap support for Q388J5 as seed ortholog is 100%.

Group of orthologs #562. Best score 106 bits
Score difference with first non-orthologous sequence - T.annulata:106 T.brucei:106

Q4UG60              	100.00%		Q38BT4              	100.00%
Bootstrap support for Q4UG60 as seed ortholog is 100%.
Bootstrap support for Q38BT4 as seed ortholog is 100%.

Group of orthologs #563. Best score 105 bits
Score difference with first non-orthologous sequence - T.annulata:105 T.brucei:105

Q4UA29              	100.00%		Q57WE3              	100.00%
Bootstrap support for Q4UA29 as seed ortholog is 100%.
Bootstrap support for Q57WE3 as seed ortholog is 100%.

Group of orthologs #564. Best score 105 bits
Score difference with first non-orthologous sequence - T.annulata:105 T.brucei:105

Q4U948              	100.00%		Q582U1              	100.00%
Bootstrap support for Q4U948 as seed ortholog is 100%.
Bootstrap support for Q582U1 as seed ortholog is 100%.

Group of orthologs #565. Best score 105 bits
Score difference with first non-orthologous sequence - T.annulata:105 T.brucei:9

Q4UGC5              	100.00%		Q57VT5              	100.00%
Bootstrap support for Q4UGC5 as seed ortholog is 100%.
Bootstrap support for Q57VT5 as seed ortholog is 65%.
Alternative seed ortholog is Q584K7 (9 bits away from this cluster)

Group of orthologs #566. Best score 104 bits
Score difference with first non-orthologous sequence - T.annulata:104 T.brucei:104

Q4U9U8              	100.00%		Q38FR1              	100.00%
Bootstrap support for Q4U9U8 as seed ortholog is 100%.
Bootstrap support for Q38FR1 as seed ortholog is 100%.

Group of orthologs #567. Best score 103 bits
Score difference with first non-orthologous sequence - T.annulata:103 T.brucei:103

Q4UDU5              	100.00%		Q387G5              	100.00%
Bootstrap support for Q4UDU5 as seed ortholog is 100%.
Bootstrap support for Q387G5 as seed ortholog is 100%.

Group of orthologs #568. Best score 102 bits
Score difference with first non-orthologous sequence - T.annulata:102 T.brucei:102

Q4UIH3              	100.00%		Q384J9              	100.00%
Bootstrap support for Q4UIH3 as seed ortholog is 100%.
Bootstrap support for Q384J9 as seed ortholog is 100%.

Group of orthologs #569. Best score 102 bits
Score difference with first non-orthologous sequence - T.annulata:102 T.brucei:102

Q4UH36              	100.00%		Q386Q8              	100.00%
Bootstrap support for Q4UH36 as seed ortholog is 100%.
Bootstrap support for Q386Q8 as seed ortholog is 100%.

Group of orthologs #570. Best score 102 bits
Score difference with first non-orthologous sequence - T.annulata:102 T.brucei:102

Q4UHG0              	100.00%		Q387R9              	100.00%
Bootstrap support for Q4UHG0 as seed ortholog is 100%.
Bootstrap support for Q387R9 as seed ortholog is 100%.

Group of orthologs #571. Best score 102 bits
Score difference with first non-orthologous sequence - T.annulata:102 T.brucei:102

Q4UAD3              	100.00%		Q587E3              	100.00%
Bootstrap support for Q4UAD3 as seed ortholog is 100%.
Bootstrap support for Q587E3 as seed ortholog is 100%.

Group of orthologs #572. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:101 T.brucei:5

Q4UAL4              	100.00%		Q389S5              	100.00%
Q4U9Q8              	30.88%		Q389T1              	100.00%
                    	       		Q389S0              	98.25%
Bootstrap support for Q4UAL4 as seed ortholog is 100%.
Bootstrap support for Q389S5 as seed ortholog is 67%.
Alternative seed ortholog is Q384T0 (5 bits away from this cluster)
Bootstrap support for Q389T1 as seed ortholog is 68%.
Alternative seed ortholog is Q384T0 (5 bits away from this cluster)

Group of orthologs #573. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:101 T.brucei:101

Q4UAD8              	100.00%		Q385W4              	100.00%
Bootstrap support for Q4UAD8 as seed ortholog is 100%.
Bootstrap support for Q385W4 as seed ortholog is 100%.

Group of orthologs #574. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:101 T.brucei:101

Q4UCM7              	100.00%		Q38AQ8              	100.00%
Bootstrap support for Q4UCM7 as seed ortholog is 100%.
Bootstrap support for Q38AQ8 as seed ortholog is 100%.

Group of orthologs #575. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:101 T.brucei:101

Q4UC16              	100.00%		Q38BT5              	100.00%
Bootstrap support for Q4UC16 as seed ortholog is 100%.
Bootstrap support for Q38BT5 as seed ortholog is 100%.

Group of orthologs #576. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:101 T.brucei:101

Q4UHW9              	100.00%		Q388G9              	100.00%
Bootstrap support for Q4UHW9 as seed ortholog is 100%.
Bootstrap support for Q388G9 as seed ortholog is 100%.

Group of orthologs #577. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:28 T.brucei:17

Q4UE45              	100.00%		Q38D83              	100.00%
Bootstrap support for Q4UE45 as seed ortholog is 72%.
Alternative seed ortholog is Q4UDH1 (28 bits away from this cluster)
Bootstrap support for Q38D83 as seed ortholog is 59%.
Alternative seed ortholog is Q385P1 (17 bits away from this cluster)

Group of orthologs #578. Best score 101 bits
Score difference with first non-orthologous sequence - T.annulata:101 T.brucei:101

Q4UIL5              	100.00%		Q389X5              	100.00%
Bootstrap support for Q4UIL5 as seed ortholog is 100%.
Bootstrap support for Q389X5 as seed ortholog is 100%.

Group of orthologs #579. Best score 100 bits
Score difference with first non-orthologous sequence - T.annulata:24 T.brucei:100

Q4UFN3              	100.00%		Q585A7              	100.00%
                    	       		Q585B3              	72.47%
                    	       		Q585B1              	71.76%
Bootstrap support for Q4UFN3 as seed ortholog is 78%.
Bootstrap support for Q585A7 as seed ortholog is 100%.

Group of orthologs #580. Best score 100 bits
Score difference with first non-orthologous sequence - T.annulata:100 T.brucei:100

Q4UA15              	100.00%		Q387U2              	100.00%
Bootstrap support for Q4UA15 as seed ortholog is 100%.
Bootstrap support for Q387U2 as seed ortholog is 100%.

Group of orthologs #581. Best score 100 bits
Score difference with first non-orthologous sequence - T.annulata:100 T.brucei:100

Q4U9U1              	100.00%		Q38F58              	100.00%
Bootstrap support for Q4U9U1 as seed ortholog is 100%.
Bootstrap support for Q38F58 as seed ortholog is 100%.

Group of orthologs #582. Best score 100 bits
Score difference with first non-orthologous sequence - T.annulata:100 T.brucei:100

Q4UBZ4              	100.00%		Q38EY2              	100.00%
Bootstrap support for Q4UBZ4 as seed ortholog is 100%.
Bootstrap support for Q38EY2 as seed ortholog is 100%.

Group of orthologs #583. Best score 99 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:99

Q4UAJ4              	100.00%		Q38CW9              	100.00%
                    	       		Q38CL1              	97.67%
Bootstrap support for Q4UAJ4 as seed ortholog is 100%.
Bootstrap support for Q38CW9 as seed ortholog is 100%.

Group of orthologs #584. Best score 99 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:99

Q4UAV0              	100.00%		Q383Y7              	100.00%
Bootstrap support for Q4UAV0 as seed ortholog is 100%.
Bootstrap support for Q383Y7 as seed ortholog is 100%.

Group of orthologs #585. Best score 99 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:99

Q4U9H6              	100.00%		Q389K1              	100.00%
Bootstrap support for Q4U9H6 as seed ortholog is 100%.
Bootstrap support for Q389K1 as seed ortholog is 100%.

Group of orthologs #586. Best score 99 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:99

Q4UCJ6              	100.00%		Q38EX7              	100.00%
Bootstrap support for Q4UCJ6 as seed ortholog is 100%.
Bootstrap support for Q38EX7 as seed ortholog is 100%.

Group of orthologs #587. Best score 99 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:99

Q4UBK0              	100.00%		Q584G9              	100.00%
Bootstrap support for Q4UBK0 as seed ortholog is 100%.
Bootstrap support for Q584G9 as seed ortholog is 100%.

Group of orthologs #588. Best score 99 bits
Score difference with first non-orthologous sequence - T.annulata:99 T.brucei:99

Q4UIF7              	100.00%		Q585L4              	100.00%
Bootstrap support for Q4UIF7 as seed ortholog is 100%.
Bootstrap support for Q585L4 as seed ortholog is 100%.

Group of orthologs #589. Best score 98 bits
Score difference with first non-orthologous sequence - T.annulata:98 T.brucei:98

Q4UF21              	100.00%		Q386U8              	100.00%
Bootstrap support for Q4UF21 as seed ortholog is 100%.
Bootstrap support for Q386U8 as seed ortholog is 100%.

Group of orthologs #590. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UGL6              	100.00%		Q383T8              	100.00%
Bootstrap support for Q4UGL6 as seed ortholog is 100%.
Bootstrap support for Q383T8 as seed ortholog is 100%.

Group of orthologs #591. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4U8I7              	100.00%		Q38EE8              	100.00%
Bootstrap support for Q4U8I7 as seed ortholog is 100%.
Bootstrap support for Q38EE8 as seed ortholog is 100%.

Group of orthologs #592. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UH62              	100.00%		Q389Z4              	100.00%
Bootstrap support for Q4UH62 as seed ortholog is 100%.
Bootstrap support for Q389Z4 as seed ortholog is 100%.

Group of orthologs #593. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UGX4              	100.00%		Q38AL8              	100.00%
Bootstrap support for Q4UGX4 as seed ortholog is 100%.
Bootstrap support for Q38AL8 as seed ortholog is 100%.

Group of orthologs #594. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:48

Q4UF48              	100.00%		Q38EC4              	100.00%
Bootstrap support for Q4UF48 as seed ortholog is 100%.
Bootstrap support for Q38EC4 as seed ortholog is 92%.

Group of orthologs #595. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UIB6              	100.00%		Q38DH8              	100.00%
Bootstrap support for Q4UIB6 as seed ortholog is 100%.
Bootstrap support for Q38DH8 as seed ortholog is 100%.

Group of orthologs #596. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UES3              	100.00%		Q57VD5              	100.00%
Bootstrap support for Q4UES3 as seed ortholog is 100%.
Bootstrap support for Q57VD5 as seed ortholog is 100%.

Group of orthologs #597. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UIB9              	100.00%		Q57TZ7              	100.00%
Bootstrap support for Q4UIB9 as seed ortholog is 100%.
Bootstrap support for Q57TZ7 as seed ortholog is 100%.

Group of orthologs #598. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UFV8              	100.00%		Q57YI9              	100.00%
Bootstrap support for Q4UFV8 as seed ortholog is 100%.
Bootstrap support for Q57YI9 as seed ortholog is 100%.

Group of orthologs #599. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UG71              	100.00%		Q57YG1              	100.00%
Bootstrap support for Q4UG71 as seed ortholog is 100%.
Bootstrap support for Q57YG1 as seed ortholog is 100%.

Group of orthologs #600. Best score 97 bits
Score difference with first non-orthologous sequence - T.annulata:97 T.brucei:97

Q4UIN2              	100.00%		Q57Z72              	100.00%
Bootstrap support for Q4UIN2 as seed ortholog is 100%.
Bootstrap support for Q57Z72 as seed ortholog is 100%.

Group of orthologs #601. Best score 96 bits
Score difference with first non-orthologous sequence - T.annulata:96 T.brucei:96

Q4U9R9              	100.00%		Q383R3              	100.00%
                    	       		Q389Z6              	98.79%
Bootstrap support for Q4U9R9 as seed ortholog is 100%.
Bootstrap support for Q383R3 as seed ortholog is 100%.

Group of orthologs #602. Best score 96 bits
Score difference with first non-orthologous sequence - T.annulata:96 T.brucei:96

Q4UE26              	100.00%		Q388I2              	100.00%
Bootstrap support for Q4UE26 as seed ortholog is 100%.
Bootstrap support for Q388I2 as seed ortholog is 100%.

Group of orthologs #603. Best score 96 bits
Score difference with first non-orthologous sequence - T.annulata:96 T.brucei:96

Q4UEN1              	100.00%		Q38AI5              	100.00%
Bootstrap support for Q4UEN1 as seed ortholog is 100%.
Bootstrap support for Q38AI5 as seed ortholog is 100%.

Group of orthologs #604. Best score 95 bits
Score difference with first non-orthologous sequence - T.annulata:95 T.brucei:5

Q4U9J0              	100.00%		Q4GZ81              	100.00%
Bootstrap support for Q4U9J0 as seed ortholog is 100%.
Bootstrap support for Q4GZ81 as seed ortholog is 62%.
Alternative seed ortholog is Q38EV4 (5 bits away from this cluster)

Group of orthologs #605. Best score 94 bits
Score difference with first non-orthologous sequence - T.annulata:94 T.brucei:94

Q4UIU0              	100.00%		Q585J1              	100.00%
                    	       		Q585J3              	100.00%
                    	       		Q38B20              	39.39%
Bootstrap support for Q4UIU0 as seed ortholog is 100%.
Bootstrap support for Q585J1 as seed ortholog is 100%.
Bootstrap support for Q585J3 as seed ortholog is 100%.

Group of orthologs #606. Best score 94 bits
Score difference with first non-orthologous sequence - T.annulata:94 T.brucei:94

Q4UD08              	100.00%		Q383V7              	100.00%
Bootstrap support for Q4UD08 as seed ortholog is 100%.
Bootstrap support for Q383V7 as seed ortholog is 100%.

Group of orthologs #607. Best score 94 bits
Score difference with first non-orthologous sequence - T.annulata:94 T.brucei:94

Q4UDT9              	100.00%		Q386L1              	100.00%
Bootstrap support for Q4UDT9 as seed ortholog is 100%.
Bootstrap support for Q386L1 as seed ortholog is 100%.

Group of orthologs #608. Best score 94 bits
Score difference with first non-orthologous sequence - T.annulata:94 T.brucei:94

Q4UB68              	100.00%		Q583K7              	100.00%
Bootstrap support for Q4UB68 as seed ortholog is 100%.
Bootstrap support for Q583K7 as seed ortholog is 100%.

Group of orthologs #609. Best score 94 bits
Score difference with first non-orthologous sequence - T.annulata:94 T.brucei:94

Q4UGF6              	100.00%		Q57YX5              	100.00%
Bootstrap support for Q4UGF6 as seed ortholog is 100%.
Bootstrap support for Q57YX5 as seed ortholog is 100%.

Group of orthologs #610. Best score 93 bits
Score difference with first non-orthologous sequence - T.annulata:93 T.brucei:93

Q4U8K4              	100.00%		Q38FD9              	100.00%
                    	       		Q38FE4              	99.35%
Bootstrap support for Q4U8K4 as seed ortholog is 100%.
Bootstrap support for Q38FD9 as seed ortholog is 100%.

Group of orthologs #611. Best score 93 bits
Score difference with first non-orthologous sequence - T.annulata:24 T.brucei:93

Q4UAM6              	100.00%		Q38D54              	100.00%
Bootstrap support for Q4UAM6 as seed ortholog is 99%.
Bootstrap support for Q38D54 as seed ortholog is 100%.

Group of orthologs #612. Best score 93 bits
Score difference with first non-orthologous sequence - T.annulata:93 T.brucei:93

Q4UBB4              	100.00%		Q57XM3              	100.00%
Bootstrap support for Q4UBB4 as seed ortholog is 100%.
Bootstrap support for Q57XM3 as seed ortholog is 100%.

Group of orthologs #613. Best score 93 bits
Score difference with first non-orthologous sequence - T.annulata:93 T.brucei:36

Q4U9K3              	100.00%		Q585J9              	100.00%
Bootstrap support for Q4U9K3 as seed ortholog is 100%.
Bootstrap support for Q585J9 as seed ortholog is 94%.

Group of orthologs #614. Best score 93 bits
Score difference with first non-orthologous sequence - T.annulata:93 T.brucei:93

Q4UH07              	100.00%		Q582P5              	100.00%
Bootstrap support for Q4UH07 as seed ortholog is 100%.
Bootstrap support for Q582P5 as seed ortholog is 100%.

Group of orthologs #615. Best score 93 bits
Score difference with first non-orthologous sequence - T.annulata:93 T.brucei:93

Q4UIM1              	100.00%		Q581Y4              	100.00%
Bootstrap support for Q4UIM1 as seed ortholog is 100%.
Bootstrap support for Q581Y4 as seed ortholog is 100%.

Group of orthologs #616. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:92 T.brucei:92

Q4U970              	100.00%		Q382X3              	100.00%
Bootstrap support for Q4U970 as seed ortholog is 100%.
Bootstrap support for Q382X3 as seed ortholog is 100%.

Group of orthologs #617. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:92 T.brucei:92

Q4UE81              	100.00%		Q383C1              	100.00%
Bootstrap support for Q4UE81 as seed ortholog is 100%.
Bootstrap support for Q383C1 as seed ortholog is 100%.

Group of orthologs #618. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:92 T.brucei:92

Q4UEJ9              	100.00%		Q38AG7              	100.00%
Bootstrap support for Q4UEJ9 as seed ortholog is 100%.
Bootstrap support for Q38AG7 as seed ortholog is 100%.

Group of orthologs #619. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:22 T.brucei:92

Q4UF32              	100.00%		Q38AC8              	100.00%
Bootstrap support for Q4UF32 as seed ortholog is 73%.
Alternative seed ortholog is Q4UA46 (22 bits away from this cluster)
Bootstrap support for Q38AC8 as seed ortholog is 100%.

Group of orthologs #620. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:7 T.brucei:92

Q4UCE9              	100.00%		Q57TZ4              	100.00%
Bootstrap support for Q4UCE9 as seed ortholog is 54%.
Alternative seed ortholog is Q4UBS9 (7 bits away from this cluster)
Bootstrap support for Q57TZ4 as seed ortholog is 100%.

Group of orthologs #621. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:92 T.brucei:92

Q4UDE6              	100.00%		Q57X83              	100.00%
Bootstrap support for Q4UDE6 as seed ortholog is 100%.
Bootstrap support for Q57X83 as seed ortholog is 100%.

Group of orthologs #622. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:92 T.brucei:23

Q4UC06              	100.00%		Q580C0              	100.00%
Bootstrap support for Q4UC06 as seed ortholog is 100%.
Bootstrap support for Q580C0 as seed ortholog is 88%.

Group of orthologs #623. Best score 92 bits
Score difference with first non-orthologous sequence - T.annulata:92 T.brucei:92

Q4UF34              	100.00%		Q57Z81              	100.00%
Bootstrap support for Q4UF34 as seed ortholog is 100%.
Bootstrap support for Q57Z81 as seed ortholog is 100%.

Group of orthologs #624. Best score 91 bits
Score difference with first non-orthologous sequence - T.annulata:91 T.brucei:9

Q4U979              	100.00%		Q38D48              	100.00%
Q4U978              	50.50%		
Bootstrap support for Q4U979 as seed ortholog is 100%.
Bootstrap support for Q38D48 as seed ortholog is 62%.
Alternative seed ortholog is Q38D51 (9 bits away from this cluster)

Group of orthologs #625. Best score 91 bits
Score difference with first non-orthologous sequence - T.annulata:91 T.brucei:91

Q4U9N7              	100.00%		Q389E3              	100.00%
Bootstrap support for Q4U9N7 as seed ortholog is 100%.
Bootstrap support for Q389E3 as seed ortholog is 100%.

Group of orthologs #626. Best score 91 bits
Score difference with first non-orthologous sequence - T.annulata:91 T.brucei:91

Q4UFV9              	100.00%		Q38C86              	100.00%
Bootstrap support for Q4UFV9 as seed ortholog is 100%.
Bootstrap support for Q38C86 as seed ortholog is 100%.

Group of orthologs #627. Best score 91 bits
Score difference with first non-orthologous sequence - T.annulata:91 T.brucei:91

Q4UEE7              	100.00%		Q4GYJ5              	100.00%
Bootstrap support for Q4UEE7 as seed ortholog is 100%.
Bootstrap support for Q4GYJ5 as seed ortholog is 100%.

Group of orthologs #628. Best score 91 bits
Score difference with first non-orthologous sequence - T.annulata:91 T.brucei:91

Q4UAX3              	100.00%		Q586U1              	100.00%
Bootstrap support for Q4UAX3 as seed ortholog is 100%.
Bootstrap support for Q586U1 as seed ortholog is 100%.

Group of orthologs #629. Best score 90 bits
Score difference with first non-orthologous sequence - T.annulata:90 T.brucei:90

Q4UC21              	100.00%		Q582K3              	100.00%
Bootstrap support for Q4UC21 as seed ortholog is 100%.
Bootstrap support for Q582K3 as seed ortholog is 100%.

Group of orthologs #630. Best score 90 bits
Score difference with first non-orthologous sequence - T.annulata:90 T.brucei:90

Q4UCY7              	100.00%		Q584V9              	100.00%
Bootstrap support for Q4UCY7 as seed ortholog is 100%.
Bootstrap support for Q584V9 as seed ortholog is 100%.

Group of orthologs #631. Best score 89 bits
Score difference with first non-orthologous sequence - T.annulata:89 T.brucei:89

Q4UDE2              	100.00%		Q381J6              	100.00%
Bootstrap support for Q4UDE2 as seed ortholog is 100%.
Bootstrap support for Q381J6 as seed ortholog is 100%.

Group of orthologs #632. Best score 89 bits
Score difference with first non-orthologous sequence - T.annulata:89 T.brucei:89

Q4UD25              	100.00%		Q38CG7              	100.00%
Bootstrap support for Q4UD25 as seed ortholog is 100%.
Bootstrap support for Q38CG7 as seed ortholog is 100%.

Group of orthologs #633. Best score 89 bits
Score difference with first non-orthologous sequence - T.annulata:89 T.brucei:89

Q4UA40              	100.00%		Q57ZT3              	100.00%
Bootstrap support for Q4UA40 as seed ortholog is 100%.
Bootstrap support for Q57ZT3 as seed ortholog is 100%.

Group of orthologs #634. Best score 89 bits
Score difference with first non-orthologous sequence - T.annulata:89 T.brucei:89

Q4UA57              	100.00%		Q57ZV0              	100.00%
Bootstrap support for Q4UA57 as seed ortholog is 100%.
Bootstrap support for Q57ZV0 as seed ortholog is 100%.

Group of orthologs #635. Best score 89 bits
Score difference with first non-orthologous sequence - T.annulata:89 T.brucei:89

Q4UHH2              	100.00%		Q57XD3              	100.00%
Bootstrap support for Q4UHH2 as seed ortholog is 100%.
Bootstrap support for Q57XD3 as seed ortholog is 100%.

Group of orthologs #636. Best score 88 bits
Score difference with first non-orthologous sequence - T.annulata:88 T.brucei:88

Q4U8U0              	100.00%		Q38B98              	100.00%
                    	       		Q57WI3              	63.60%
Bootstrap support for Q4U8U0 as seed ortholog is 100%.
Bootstrap support for Q38B98 as seed ortholog is 100%.

Group of orthologs #637. Best score 88 bits
Score difference with first non-orthologous sequence - T.annulata:88 T.brucei:88

Q4U9W8              	100.00%		Q57YL5              	100.00%
Bootstrap support for Q4U9W8 as seed ortholog is 100%.
Bootstrap support for Q57YL5 as seed ortholog is 100%.

Group of orthologs #638. Best score 88 bits
Score difference with first non-orthologous sequence - T.annulata:88 T.brucei:88

Q4UAM3              	100.00%		Q587A8              	100.00%
Bootstrap support for Q4UAM3 as seed ortholog is 100%.
Bootstrap support for Q587A8 as seed ortholog is 100%.

Group of orthologs #639. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:87

Q4UC36              	100.00%		Q38A66              	100.00%
Q4UC92              	100.00%		Q580Y2              	100.00%
Q4UC91              	77.04%		Q580Y5              	95.82%
                    	       		Q580Y3              	93.81%
                    	       		Q4GYU2              	53.28%
                    	       		Q4GYT6              	53.11%
                    	       		Q4GYT9              	53.03%
Bootstrap support for Q4UC36 as seed ortholog is 100%.
Bootstrap support for Q4UC92 as seed ortholog is 100%.
Bootstrap support for Q38A66 as seed ortholog is 100%.
Bootstrap support for Q580Y2 as seed ortholog is 100%.

Group of orthologs #640. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:87

Q4UB67              	100.00%		Q385Y8              	100.00%
                    	       		Q38AC1              	44.10%
Bootstrap support for Q4UB67 as seed ortholog is 100%.
Bootstrap support for Q385Y8 as seed ortholog is 100%.

Group of orthologs #641. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:87

Q4UA50              	100.00%		Q382F0              	100.00%
Bootstrap support for Q4UA50 as seed ortholog is 100%.
Bootstrap support for Q382F0 as seed ortholog is 100%.

Group of orthologs #642. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:87

Q4UDS3              	100.00%		Q38AU1              	100.00%
Bootstrap support for Q4UDS3 as seed ortholog is 100%.
Bootstrap support for Q38AU1 as seed ortholog is 100%.

Group of orthologs #643. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:44 T.brucei:87

Q4UFQ4              	100.00%		Q38D47              	100.00%
Bootstrap support for Q4UFQ4 as seed ortholog is 94%.
Bootstrap support for Q38D47 as seed ortholog is 100%.

Group of orthologs #644. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:27

Q4U9W0              	100.00%		Q57XD9              	100.00%
Bootstrap support for Q4U9W0 as seed ortholog is 100%.
Bootstrap support for Q57XD9 as seed ortholog is 74%.
Alternative seed ortholog is Q57Y21 (27 bits away from this cluster)

Group of orthologs #645. Best score 87 bits
Score difference with first non-orthologous sequence - T.annulata:87 T.brucei:34

Q4UFY0              	100.00%		Q583T6              	100.00%
Bootstrap support for Q4UFY0 as seed ortholog is 100%.
Bootstrap support for Q583T6 as seed ortholog is 84%.

Group of orthologs #646. Best score 86 bits
Score difference with first non-orthologous sequence - T.annulata:86 T.brucei:5

Q4UET2              	100.00%		Q389H1              	100.00%
Bootstrap support for Q4UET2 as seed ortholog is 100%.
Bootstrap support for Q389H1 as seed ortholog is 52%.
Alternative seed ortholog is Q38AS6 (5 bits away from this cluster)

Group of orthologs #647. Best score 86 bits
Score difference with first non-orthologous sequence - T.annulata:86 T.brucei:86

Q4UIJ5              	100.00%		Q387V9              	100.00%
Bootstrap support for Q4UIJ5 as seed ortholog is 100%.
Bootstrap support for Q387V9 as seed ortholog is 100%.

Group of orthologs #648. Best score 86 bits
Score difference with first non-orthologous sequence - T.annulata:86 T.brucei:86

Q4UH32              	100.00%		Q38CE4              	100.00%
Bootstrap support for Q4UH32 as seed ortholog is 100%.
Bootstrap support for Q38CE4 as seed ortholog is 100%.

Group of orthologs #649. Best score 86 bits
Score difference with first non-orthologous sequence - T.annulata:86 T.brucei:86

Q4UF33              	100.00%		Q57W13              	100.00%
Bootstrap support for Q4UF33 as seed ortholog is 100%.
Bootstrap support for Q57W13 as seed ortholog is 100%.

Group of orthologs #650. Best score 85 bits
Score difference with first non-orthologous sequence - T.annulata:85 T.brucei:12

Q4UA87              	100.00%		Q38D75              	100.00%
Bootstrap support for Q4UA87 as seed ortholog is 100%.
Bootstrap support for Q38D75 as seed ortholog is 60%.
Alternative seed ortholog is Q38AK1 (12 bits away from this cluster)

Group of orthologs #651. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:84

Q4UGX1              	100.00%		Q38DX7              	100.00%
                    	       		Q386K3              	10.13%
Bootstrap support for Q4UGX1 as seed ortholog is 100%.
Bootstrap support for Q38DX7 as seed ortholog is 100%.

Group of orthologs #652. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:6

Q4UDI1              	100.00%		Q386J4              	100.00%
Bootstrap support for Q4UDI1 as seed ortholog is 100%.
Bootstrap support for Q386J4 as seed ortholog is 63%.
Alternative seed ortholog is Q382S2 (6 bits away from this cluster)

Group of orthologs #653. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:84

Q4UC12              	100.00%		Q57U30              	100.00%
Bootstrap support for Q4UC12 as seed ortholog is 100%.
Bootstrap support for Q57U30 as seed ortholog is 100%.

Group of orthologs #654. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:84

Q4UB02              	100.00%		Q57W17              	100.00%
Bootstrap support for Q4UB02 as seed ortholog is 100%.
Bootstrap support for Q57W17 as seed ortholog is 100%.

Group of orthologs #655. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:84

Q4UFZ4              	100.00%		Q57US9              	100.00%
Bootstrap support for Q4UFZ4 as seed ortholog is 100%.
Bootstrap support for Q57US9 as seed ortholog is 100%.

Group of orthologs #656. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:84

Q4UEJ5              	100.00%		Q587A4              	100.00%
Bootstrap support for Q4UEJ5 as seed ortholog is 100%.
Bootstrap support for Q587A4 as seed ortholog is 100%.

Group of orthologs #657. Best score 84 bits
Score difference with first non-orthologous sequence - T.annulata:84 T.brucei:84

Q4UI49              	100.00%		Q582G7              	100.00%
Bootstrap support for Q4UI49 as seed ortholog is 100%.
Bootstrap support for Q582G7 as seed ortholog is 100%.

Group of orthologs #658. Best score 83 bits
Score difference with first non-orthologous sequence - T.annulata:83 T.brucei:83

Q4UDQ4              	100.00%		Q584W4              	100.00%
Bootstrap support for Q4UDQ4 as seed ortholog is 100%.
Bootstrap support for Q584W4 as seed ortholog is 100%.

Group of orthologs #659. Best score 82 bits
Score difference with first non-orthologous sequence - T.annulata:82 T.brucei:82

Q4UBU1              	100.00%		Q383V6              	100.00%
                    	       		Q388X5              	100.00%
Bootstrap support for Q4UBU1 as seed ortholog is 100%.
Bootstrap support for Q383V6 as seed ortholog is 100%.
Bootstrap support for Q388X5 as seed ortholog is 100%.

Group of orthologs #660. Best score 82 bits
Score difference with first non-orthologous sequence - T.annulata:82 T.brucei:82

Q4UDM9              	100.00%		Q38AM4              	100.00%
Bootstrap support for Q4UDM9 as seed ortholog is 100%.
Bootstrap support for Q38AM4 as seed ortholog is 100%.

Group of orthologs #661. Best score 82 bits
Score difference with first non-orthologous sequence - T.annulata:82 T.brucei:38

Q4UHJ7              	100.00%		Q387E9              	100.00%
Bootstrap support for Q4UHJ7 as seed ortholog is 100%.
Bootstrap support for Q387E9 as seed ortholog is 97%.

Group of orthologs #662. Best score 82 bits
Score difference with first non-orthologous sequence - T.annulata:82 T.brucei:37

Q4UE79              	100.00%		Q580U7              	100.00%
Bootstrap support for Q4UE79 as seed ortholog is 100%.
Bootstrap support for Q580U7 as seed ortholog is 94%.

Group of orthologs #663. Best score 82 bits
Score difference with first non-orthologous sequence - T.annulata:82 T.brucei:82

Q4UEZ1              	100.00%		Q586K6              	100.00%
Bootstrap support for Q4UEZ1 as seed ortholog is 100%.
Bootstrap support for Q586K6 as seed ortholog is 100%.

Group of orthologs #664. Best score 81 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:81

Q4UAV9              	100.00%		Q388L3              	100.00%
Bootstrap support for Q4UAV9 as seed ortholog is 100%.
Bootstrap support for Q388L3 as seed ortholog is 100%.

Group of orthologs #665. Best score 81 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:81

Q4UCT0              	100.00%		Q388I7              	100.00%
Bootstrap support for Q4UCT0 as seed ortholog is 100%.
Bootstrap support for Q388I7 as seed ortholog is 100%.

Group of orthologs #666. Best score 81 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:81

Q4UF16              	100.00%		Q387U0              	100.00%
Bootstrap support for Q4UF16 as seed ortholog is 100%.
Bootstrap support for Q387U0 as seed ortholog is 100%.

Group of orthologs #667. Best score 81 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:81

Q4U8Y4              	100.00%		Q4GYP5              	100.00%
Bootstrap support for Q4U8Y4 as seed ortholog is 100%.
Bootstrap support for Q4GYP5 as seed ortholog is 100%.

Group of orthologs #668. Best score 81 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:81

Q4UIF8              	100.00%		Q38FW8              	100.00%
Bootstrap support for Q4UIF8 as seed ortholog is 100%.
Bootstrap support for Q38FW8 as seed ortholog is 100%.

Group of orthologs #669. Best score 81 bits
Score difference with first non-orthologous sequence - T.annulata:81 T.brucei:81

Q4UDA3              	100.00%		Q586F3              	100.00%
Bootstrap support for Q4UDA3 as seed ortholog is 100%.
Bootstrap support for Q586F3 as seed ortholog is 100%.

Group of orthologs #670. Best score 80 bits
Score difference with first non-orthologous sequence - T.annulata:80 T.brucei:80

Q4UBY6              	100.00%		Q381Q7              	100.00%
Bootstrap support for Q4UBY6 as seed ortholog is 100%.
Bootstrap support for Q381Q7 as seed ortholog is 100%.

Group of orthologs #671. Best score 80 bits
Score difference with first non-orthologous sequence - T.annulata:80 T.brucei:80

Q4UEE3              	100.00%		Q57ZM9              	100.00%
Bootstrap support for Q4UEE3 as seed ortholog is 100%.
Bootstrap support for Q57ZM9 as seed ortholog is 100%.

Group of orthologs #672. Best score 80 bits
Score difference with first non-orthologous sequence - T.annulata:80 T.brucei:80

Q4UIY0              	100.00%		Q57YB7              	100.00%
Bootstrap support for Q4UIY0 as seed ortholog is 100%.
Bootstrap support for Q57YB7 as seed ortholog is 100%.

Group of orthologs #673. Best score 79 bits
Score difference with first non-orthologous sequence - T.annulata:79 T.brucei:2

Q4UBE8              	100.00%		Q582V3              	100.00%
Q4UA07              	12.99%		
Bootstrap support for Q4UBE8 as seed ortholog is 100%.
Bootstrap support for Q582V3 as seed ortholog is 54%.
Alternative seed ortholog is Q384C1 (2 bits away from this cluster)

Group of orthologs #674. Best score 79 bits
Score difference with first non-orthologous sequence - T.annulata:79 T.brucei:79

Q4U9B2              	100.00%		Q381Q6              	100.00%
Bootstrap support for Q4U9B2 as seed ortholog is 100%.
Bootstrap support for Q381Q6 as seed ortholog is 100%.

Group of orthologs #675. Best score 79 bits
Score difference with first non-orthologous sequence - T.annulata:79 T.brucei:79

Q4U8Q7              	100.00%		Q387K3              	100.00%
Bootstrap support for Q4U8Q7 as seed ortholog is 100%.
Bootstrap support for Q387K3 as seed ortholog is 100%.

Group of orthologs #676. Best score 78 bits
Score difference with first non-orthologous sequence - T.annulata:78 T.brucei:78

Q4UGL5              	100.00%		Q57TT8              	100.00%
                    	       		Q57TT7              	95.65%
Bootstrap support for Q4UGL5 as seed ortholog is 100%.
Bootstrap support for Q57TT8 as seed ortholog is 100%.

Group of orthologs #677. Best score 78 bits
Score difference with first non-orthologous sequence - T.annulata:78 T.brucei:78

Q4UB75              	100.00%		Q38AF8              	100.00%
Bootstrap support for Q4UB75 as seed ortholog is 100%.
Bootstrap support for Q38AF8 as seed ortholog is 100%.

Group of orthologs #678. Best score 78 bits
Score difference with first non-orthologous sequence - T.annulata:78 T.brucei:78

Q4U9W1              	100.00%		Q57US8              	100.00%
Bootstrap support for Q4U9W1 as seed ortholog is 100%.
Bootstrap support for Q57US8 as seed ortholog is 100%.

Group of orthologs #679. Best score 78 bits
Score difference with first non-orthologous sequence - T.annulata:78 T.brucei:78

Q4UBV2              	100.00%		Q57TV9              	100.00%
Bootstrap support for Q4UBV2 as seed ortholog is 100%.
Bootstrap support for Q57TV9 as seed ortholog is 100%.

Group of orthologs #680. Best score 78 bits
Score difference with first non-orthologous sequence - T.annulata:78 T.brucei:78

Q4UA63              	100.00%		Q57WY8              	100.00%
Bootstrap support for Q4UA63 as seed ortholog is 100%.
Bootstrap support for Q57WY8 as seed ortholog is 100%.

Group of orthologs #681. Best score 77 bits
Score difference with first non-orthologous sequence - T.annulata:77 T.brucei:77

Q4UAG9              	100.00%		Q38BF5              	100.00%
Q4UAG8              	35.33%		
Q4UAG7              	14.59%		
Bootstrap support for Q4UAG9 as seed ortholog is 100%.
Bootstrap support for Q38BF5 as seed ortholog is 100%.

Group of orthologs #682. Best score 77 bits
Score difference with first non-orthologous sequence - T.annulata:77 T.brucei:77

Q4U8G2              	100.00%		Q38AW8              	100.00%
Bootstrap support for Q4U8G2 as seed ortholog is 100%.
Bootstrap support for Q38AW8 as seed ortholog is 100%.

Group of orthologs #683. Best score 77 bits
Score difference with first non-orthologous sequence - T.annulata:77 T.brucei:77

Q4UCH1              	100.00%		Q4GZ20              	100.00%
Bootstrap support for Q4UCH1 as seed ortholog is 100%.
Bootstrap support for Q4GZ20 as seed ortholog is 100%.

Group of orthologs #684. Best score 77 bits
Score difference with first non-orthologous sequence - T.annulata:77 T.brucei:77

Q4UBT4              	100.00%		Q580I8              	100.00%
Bootstrap support for Q4UBT4 as seed ortholog is 100%.
Bootstrap support for Q580I8 as seed ortholog is 100%.

Group of orthologs #685. Best score 76 bits
Score difference with first non-orthologous sequence - T.annulata:76 T.brucei:76

Q4UAG0              	100.00%		Q385I4              	100.00%
Bootstrap support for Q4UAG0 as seed ortholog is 100%.
Bootstrap support for Q385I4 as seed ortholog is 100%.

Group of orthologs #686. Best score 76 bits
Score difference with first non-orthologous sequence - T.annulata:76 T.brucei:76

Q4U8Y0              	100.00%		Q38BQ9              	100.00%
Bootstrap support for Q4U8Y0 as seed ortholog is 100%.
Bootstrap support for Q38BQ9 as seed ortholog is 100%.

Group of orthologs #687. Best score 76 bits
Score difference with first non-orthologous sequence - T.annulata:76 T.brucei:76

Q4UIE1              	100.00%		Q584T9              	100.00%
Bootstrap support for Q4UIE1 as seed ortholog is 100%.
Bootstrap support for Q584T9 as seed ortholog is 100%.

Group of orthologs #688. Best score 75 bits
Score difference with first non-orthologous sequence - T.annulata:75 T.brucei:75

Q4UAU5              	100.00%		Q388C5              	100.00%
Bootstrap support for Q4UAU5 as seed ortholog is 100%.
Bootstrap support for Q388C5 as seed ortholog is 100%.

Group of orthologs #689. Best score 75 bits
Score difference with first non-orthologous sequence - T.annulata:75 T.brucei:75

Q4UF87              	100.00%		Q389X0              	100.00%
Bootstrap support for Q4UF87 as seed ortholog is 100%.
Bootstrap support for Q389X0 as seed ortholog is 100%.

Group of orthologs #690. Best score 75 bits
Score difference with first non-orthologous sequence - T.annulata:75 T.brucei:75

Q4UFG8              	100.00%		Q38FY6              	100.00%
Bootstrap support for Q4UFG8 as seed ortholog is 100%.
Bootstrap support for Q38FY6 as seed ortholog is 100%.

Group of orthologs #691. Best score 74 bits
Score difference with first non-orthologous sequence - T.annulata:74 T.brucei:74

Q4UD31              	100.00%		Q38BI2              	100.00%
                    	       		Q38AF9              	27.17%
                    	       		Q38DA6              	15.30%
                    	       		Q57V48              	15.30%
                    	       		Q586S5              	5.02%
Bootstrap support for Q4UD31 as seed ortholog is 100%.
Bootstrap support for Q38BI2 as seed ortholog is 100%.

Group of orthologs #692. Best score 74 bits
Score difference with first non-orthologous sequence - T.annulata:74 T.brucei:74

Q4UJ29              	100.00%		Q38BY9              	100.00%
                    	       		Q387X2              	28.70%
                    	       		Q38BZ0              	17.51%
Bootstrap support for Q4UJ29 as seed ortholog is 100%.
Bootstrap support for Q38BY9 as seed ortholog is 100%.

Group of orthologs #693. Best score 74 bits
Score difference with first non-orthologous sequence - T.annulata:74 T.brucei:74

Q4UA70              	100.00%		Q389Z2              	100.00%
Bootstrap support for Q4UA70 as seed ortholog is 100%.
Bootstrap support for Q389Z2 as seed ortholog is 100%.

Group of orthologs #694. Best score 74 bits
Score difference with first non-orthologous sequence - T.annulata:74 T.brucei:74

Q4UE88              	100.00%		Q387J6              	100.00%
Bootstrap support for Q4UE88 as seed ortholog is 100%.
Bootstrap support for Q387J6 as seed ortholog is 100%.

Group of orthologs #695. Best score 74 bits
Score difference with first non-orthologous sequence - T.annulata:74 T.brucei:74

Q4UGE9              	100.00%		Q38CM0              	100.00%
Bootstrap support for Q4UGE9 as seed ortholog is 100%.
Bootstrap support for Q38CM0 as seed ortholog is 100%.

Group of orthologs #696. Best score 73 bits
Score difference with first non-orthologous sequence - T.annulata:73 T.brucei:73

Q4UAQ0              	100.00%		Q386E7              	100.00%
Bootstrap support for Q4UAQ0 as seed ortholog is 100%.
Bootstrap support for Q386E7 as seed ortholog is 100%.

Group of orthologs #697. Best score 73 bits
Score difference with first non-orthologous sequence - T.annulata:73 T.brucei:73

Q4UHS5              	100.00%		Q389T5              	100.00%
Bootstrap support for Q4UHS5 as seed ortholog is 100%.
Bootstrap support for Q389T5 as seed ortholog is 100%.

Group of orthologs #698. Best score 72 bits
Score difference with first non-orthologous sequence - T.annulata:72 T.brucei:72

Q4UFE4              	100.00%		Q388L2              	100.00%
                    	       		Q57U80              	23.16%
                    	       		Q38E38              	7.72%
                    	       		Q584Z7              	7.12%
Bootstrap support for Q4UFE4 as seed ortholog is 100%.
Bootstrap support for Q388L2 as seed ortholog is 100%.

Group of orthologs #699. Best score 72 bits
Score difference with first non-orthologous sequence - T.annulata:72 T.brucei:72

Q4UE40              	100.00%		Q582K5              	100.00%
                    	       		Q582K6              	100.00%
                    	       		Q57WE7              	7.56%
Bootstrap support for Q4UE40 as seed ortholog is 100%.
Bootstrap support for Q582K5 as seed ortholog is 100%.
Bootstrap support for Q582K6 as seed ortholog is 100%.

Group of orthologs #700. Best score 72 bits
Score difference with first non-orthologous sequence - T.annulata:72 T.brucei:72

Q4UD14              	100.00%		Q381Z4              	100.00%
Bootstrap support for Q4UD14 as seed ortholog is 100%.
Bootstrap support for Q381Z4 as seed ortholog is 100%.

Group of orthologs #701. Best score 72 bits
Score difference with first non-orthologous sequence - T.annulata:72 T.brucei:1

Q4UFG7              	100.00%		Q381H8              	100.00%
Bootstrap support for Q4UFG7 as seed ortholog is 100%.
Bootstrap support for Q381H8 as seed ortholog is 55%.
Alternative seed ortholog is Q4GYR2 (1 bits away from this cluster)

Group of orthologs #702. Best score 71 bits
Score difference with first non-orthologous sequence - T.annulata:71 T.brucei:71

Q4UHY2              	100.00%		Q381M3              	100.00%
Bootstrap support for Q4UHY2 as seed ortholog is 100%.
Bootstrap support for Q381M3 as seed ortholog is 100%.

Group of orthologs #703. Best score 71 bits
Score difference with first non-orthologous sequence - T.annulata:71 T.brucei:71

Q4U8Q3              	100.00%		Q57X98              	100.00%
Bootstrap support for Q4U8Q3 as seed ortholog is 100%.
Bootstrap support for Q57X98 as seed ortholog is 100%.

Group of orthologs #704. Best score 71 bits
Score difference with first non-orthologous sequence - T.annulata:71 T.brucei:71

Q4UC31              	100.00%		Q57UW3              	100.00%
Bootstrap support for Q4UC31 as seed ortholog is 100%.
Bootstrap support for Q57UW3 as seed ortholog is 100%.

Group of orthologs #705. Best score 71 bits
Score difference with first non-orthologous sequence - T.annulata:71 T.brucei:71

Q4UHI7              	100.00%		Q38F27              	100.00%
Bootstrap support for Q4UHI7 as seed ortholog is 100%.
Bootstrap support for Q38F27 as seed ortholog is 100%.

Group of orthologs #706. Best score 71 bits
Score difference with first non-orthologous sequence - T.annulata:71 T.brucei:71

Q4UDP5              	100.00%		Q57W40              	100.00%
Bootstrap support for Q4UDP5 as seed ortholog is 100%.
Bootstrap support for Q57W40 as seed ortholog is 100%.

Group of orthologs #707. Best score 71 bits
Score difference with first non-orthologous sequence - T.annulata:71 T.brucei:71

Q4UHI2              	100.00%		Q57XX0              	100.00%
Bootstrap support for Q4UHI2 as seed ortholog is 100%.
Bootstrap support for Q57XX0 as seed ortholog is 100%.

Group of orthologs #708. Best score 70 bits
Score difference with first non-orthologous sequence - T.annulata:70 T.brucei:70

Q4U8L1              	100.00%		Q38B66              	100.00%
                    	       		Q38B67              	100.00%
Bootstrap support for Q4U8L1 as seed ortholog is 100%.
Bootstrap support for Q38B66 as seed ortholog is 100%.
Bootstrap support for Q38B67 as seed ortholog is 100%.

Group of orthologs #709. Best score 70 bits
Score difference with first non-orthologous sequence - T.annulata:70 T.brucei:70

Q4UED2              	100.00%		Q387K7              	100.00%
Bootstrap support for Q4UED2 as seed ortholog is 100%.
Bootstrap support for Q387K7 as seed ortholog is 100%.

Group of orthologs #710. Best score 70 bits
Score difference with first non-orthologous sequence - T.annulata:70 T.brucei:70

Q4UH72              	100.00%		Q38D95              	100.00%
Bootstrap support for Q4UH72 as seed ortholog is 100%.
Bootstrap support for Q38D95 as seed ortholog is 100%.

Group of orthologs #711. Best score 70 bits
Score difference with first non-orthologous sequence - T.annulata:70 T.brucei:70

Q4UF45              	100.00%		Q57WG8              	100.00%
Bootstrap support for Q4UF45 as seed ortholog is 100%.
Bootstrap support for Q57WG8 as seed ortholog is 100%.

Group of orthologs #712. Best score 69 bits
Score difference with first non-orthologous sequence - T.annulata:69 T.brucei:69

Q4UF94              	100.00%		Q38BE0              	100.00%
Bootstrap support for Q4UF94 as seed ortholog is 100%.
Bootstrap support for Q38BE0 as seed ortholog is 100%.

Group of orthologs #713. Best score 69 bits
Score difference with first non-orthologous sequence - T.annulata:69 T.brucei:69

Q4UHK4              	100.00%		Q38BC7              	100.00%
Bootstrap support for Q4UHK4 as seed ortholog is 100%.
Bootstrap support for Q38BC7 as seed ortholog is 100%.

Group of orthologs #714. Best score 68 bits
Score difference with first non-orthologous sequence - T.annulata:68 T.brucei:68

Q4U989              	100.00%		Q57YJ8              	100.00%
Bootstrap support for Q4U989 as seed ortholog is 100%.
Bootstrap support for Q57YJ8 as seed ortholog is 100%.

Group of orthologs #715. Best score 67 bits
Score difference with first non-orthologous sequence - T.annulata:67 T.brucei:67

Q4U962              	100.00%		D6XCX1              	100.00%
Bootstrap support for Q4U962 as seed ortholog is 100%.
Bootstrap support for D6XCX1 as seed ortholog is 100%.

Group of orthologs #716. Best score 67 bits
Score difference with first non-orthologous sequence - T.annulata:67 T.brucei:67

Q4UEH2              	100.00%		Q57WZ4              	100.00%
Bootstrap support for Q4UEH2 as seed ortholog is 100%.
Bootstrap support for Q57WZ4 as seed ortholog is 100%.

Group of orthologs #717. Best score 66 bits
Score difference with first non-orthologous sequence - T.annulata:66 T.brucei:66

Q4UE21              	100.00%		Q581B1              	100.00%
                    	       		Q57YW2              	98.58%
Bootstrap support for Q4UE21 as seed ortholog is 100%.
Bootstrap support for Q581B1 as seed ortholog is 100%.

Group of orthologs #718. Best score 66 bits
Score difference with first non-orthologous sequence - T.annulata:66 T.brucei:66

Q4UHW1              	100.00%		Q385S1              	100.00%
Bootstrap support for Q4UHW1 as seed ortholog is 100%.
Bootstrap support for Q385S1 as seed ortholog is 100%.

Group of orthologs #719. Best score 66 bits
Score difference with first non-orthologous sequence - T.annulata:66 T.brucei:66

Q4UFK8              	100.00%		Q38CY4              	100.00%
Bootstrap support for Q4UFK8 as seed ortholog is 100%.
Bootstrap support for Q38CY4 as seed ortholog is 100%.

Group of orthologs #720. Best score 66 bits
Score difference with first non-orthologous sequence - T.annulata:66 T.brucei:66

Q4UCH7              	100.00%		Q586I8              	100.00%
Bootstrap support for Q4UCH7 as seed ortholog is 100%.
Bootstrap support for Q586I8 as seed ortholog is 100%.

Group of orthologs #721. Best score 65 bits
Score difference with first non-orthologous sequence - T.annulata:1 T.brucei:65

Q4U990              	100.00%		Q382A1              	100.00%
                    	       		Q382A2              	45.62%
                    	       		Q38DI5              	7.95%
Bootstrap support for Q4U990 as seed ortholog is 51%.
Alternative seed ortholog is Q4UC80 (1 bits away from this cluster)
Bootstrap support for Q382A1 as seed ortholog is 100%.

Group of orthologs #722. Best score 65 bits
Score difference with first non-orthologous sequence - T.annulata:65 T.brucei:65

Q4UF24              	100.00%		Q381S0              	100.00%
Bootstrap support for Q4UF24 as seed ortholog is 100%.
Bootstrap support for Q381S0 as seed ortholog is 100%.

Group of orthologs #723. Best score 65 bits
Score difference with first non-orthologous sequence - T.annulata:65 T.brucei:65

Q4UGV6              	100.00%		Q38DY4              	100.00%
Bootstrap support for Q4UGV6 as seed ortholog is 100%.
Bootstrap support for Q38DY4 as seed ortholog is 100%.

Group of orthologs #724. Best score 65 bits
Score difference with first non-orthologous sequence - T.annulata:65 T.brucei:18

Q4UAA4              	100.00%		Q57XQ9              	100.00%
Bootstrap support for Q4UAA4 as seed ortholog is 100%.
Bootstrap support for Q57XQ9 as seed ortholog is 77%.

Group of orthologs #725. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:64

Q4UA67              	100.00%		Q38C82              	100.00%
                    	       		Q38CY6              	96.67%
Bootstrap support for Q4UA67 as seed ortholog is 100%.
Bootstrap support for Q38C82 as seed ortholog is 100%.

Group of orthologs #726. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:64

Q4UEV1              	100.00%		Q584D3              	100.00%
Q4UIR4              	100.00%		
Bootstrap support for Q4UEV1 as seed ortholog is 100%.
Bootstrap support for Q4UIR4 as seed ortholog is 100%.
Bootstrap support for Q584D3 as seed ortholog is 100%.

Group of orthologs #727. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:64

Q4UC53              	100.00%		D6XI03              	100.00%
Bootstrap support for Q4UC53 as seed ortholog is 100%.
Bootstrap support for D6XI03 as seed ortholog is 100%.

Group of orthologs #728. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:64

Q4UIC0              	100.00%		D6XFL0              	100.00%
Bootstrap support for Q4UIC0 as seed ortholog is 100%.
Bootstrap support for D6XFL0 as seed ortholog is 100%.

Group of orthologs #729. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:18

Q4UA88              	100.00%		Q38FJ1              	100.00%
Bootstrap support for Q4UA88 as seed ortholog is 100%.
Bootstrap support for Q38FJ1 as seed ortholog is 76%.

Group of orthologs #730. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:64

Q4UBJ0              	100.00%		Q584R4              	100.00%
Bootstrap support for Q4UBJ0 as seed ortholog is 100%.
Bootstrap support for Q584R4 as seed ortholog is 100%.

Group of orthologs #731. Best score 64 bits
Score difference with first non-orthologous sequence - T.annulata:64 T.brucei:64

Q4UI64              	100.00%		Q587D1              	100.00%
Bootstrap support for Q4UI64 as seed ortholog is 100%.
Bootstrap support for Q587D1 as seed ortholog is 100%.

Group of orthologs #732. Best score 62 bits
Score difference with first non-orthologous sequence - T.annulata:62 T.brucei:62

Q4UF40              	100.00%		Q384U5              	100.00%
Bootstrap support for Q4UF40 as seed ortholog is 100%.
Bootstrap support for Q384U5 as seed ortholog is 100%.

Group of orthologs #733. Best score 62 bits
Score difference with first non-orthologous sequence - T.annulata:62 T.brucei:62

Q4UEP2              	100.00%		Q38AL7              	100.00%
Bootstrap support for Q4UEP2 as seed ortholog is 100%.
Bootstrap support for Q38AL7 as seed ortholog is 100%.

Group of orthologs #734. Best score 62 bits
Score difference with first non-orthologous sequence - T.annulata:62 T.brucei:62

Q4UEP7              	100.00%		Q57UW9              	100.00%
Bootstrap support for Q4UEP7 as seed ortholog is 100%.
Bootstrap support for Q57UW9 as seed ortholog is 100%.

Group of orthologs #735. Best score 62 bits
Score difference with first non-orthologous sequence - T.annulata:62 T.brucei:62

Q4UE74              	100.00%		Q57ZB4              	100.00%
Bootstrap support for Q4UE74 as seed ortholog is 100%.
Bootstrap support for Q57ZB4 as seed ortholog is 100%.

Group of orthologs #736. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4UGN5              	100.00%		Q38FV6              	100.00%
                    	       		Q38BR9              	92.52%
Bootstrap support for Q4UGN5 as seed ortholog is 100%.
Bootstrap support for Q38FV6 as seed ortholog is 100%.

Group of orthologs #737. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4U9J3              	100.00%		Q384D9              	100.00%
Bootstrap support for Q4U9J3 as seed ortholog is 100%.
Bootstrap support for Q384D9 as seed ortholog is 100%.

Group of orthologs #738. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4U960              	100.00%		Q57WN8              	100.00%
Bootstrap support for Q4U960 as seed ortholog is 100%.
Bootstrap support for Q57WN8 as seed ortholog is 100%.

Group of orthologs #739. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4UDM3              	100.00%		Q57U83              	100.00%
Bootstrap support for Q4UDM3 as seed ortholog is 100%.
Bootstrap support for Q57U83 as seed ortholog is 100%.

Group of orthologs #740. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4UC71              	100.00%		Q57WX9              	100.00%
Bootstrap support for Q4UC71 as seed ortholog is 100%.
Bootstrap support for Q57WX9 as seed ortholog is 100%.

Group of orthologs #741. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4U9V3              	100.00%		Q580B7              	100.00%
Bootstrap support for Q4U9V3 as seed ortholog is 100%.
Bootstrap support for Q580B7 as seed ortholog is 100%.

Group of orthologs #742. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:61

Q4UGK7              	100.00%		Q57VV5              	100.00%
Bootstrap support for Q4UGK7 as seed ortholog is 100%.
Bootstrap support for Q57VV5 as seed ortholog is 100%.

Group of orthologs #743. Best score 61 bits
Score difference with first non-orthologous sequence - T.annulata:61 T.brucei:2

Q4UDZ1              	100.00%		Q585V8              	100.00%
Bootstrap support for Q4UDZ1 as seed ortholog is 100%.
Bootstrap support for Q585V8 as seed ortholog is 60%.
Alternative seed ortholog is Q57UB0 (2 bits away from this cluster)

Group of orthologs #744. Best score 60 bits
Score difference with first non-orthologous sequence - T.annulata:60 T.brucei:60

Q4UD10              	100.00%		Q38B56              	100.00%
                    	       		Q38B58              	100.00%
Bootstrap support for Q4UD10 as seed ortholog is 100%.
Bootstrap support for Q38B56 as seed ortholog is 100%.
Bootstrap support for Q38B58 as seed ortholog is 100%.

Group of orthologs #745. Best score 60 bits
Score difference with first non-orthologous sequence - T.annulata:60 T.brucei:60

Q4UDF4              	100.00%		Q383V9              	100.00%
Bootstrap support for Q4UDF4 as seed ortholog is 100%.
Bootstrap support for Q383V9 as seed ortholog is 100%.

Group of orthologs #746. Best score 60 bits
Score difference with first non-orthologous sequence - T.annulata:60 T.brucei:60

Q4UIY4              	100.00%		Q57ZA8              	100.00%
Bootstrap support for Q4UIY4 as seed ortholog is 100%.
Bootstrap support for Q57ZA8 as seed ortholog is 100%.

Group of orthologs #747. Best score 59 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:59

Q4UGG7              	100.00%		Q381Y8              	100.00%
Bootstrap support for Q4UGG7 as seed ortholog is 100%.
Bootstrap support for Q381Y8 as seed ortholog is 100%.

Group of orthologs #748. Best score 59 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:59

Q4U9S7              	100.00%		Q38DB7              	100.00%
Bootstrap support for Q4U9S7 as seed ortholog is 100%.
Bootstrap support for Q38DB7 as seed ortholog is 100%.

Group of orthologs #749. Best score 59 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:59

Q4UCQ0              	100.00%		Q38ER5              	100.00%
Bootstrap support for Q4UCQ0 as seed ortholog is 100%.
Bootstrap support for Q38ER5 as seed ortholog is 100%.

Group of orthologs #750. Best score 59 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:59

Q4UG46              	100.00%		Q57VC9              	100.00%
Bootstrap support for Q4UG46 as seed ortholog is 100%.
Bootstrap support for Q57VC9 as seed ortholog is 100%.

Group of orthologs #751. Best score 59 bits
Score difference with first non-orthologous sequence - T.annulata:59 T.brucei:59

Q4UF84              	100.00%		Q586C5              	100.00%
Bootstrap support for Q4UF84 as seed ortholog is 100%.
Bootstrap support for Q586C5 as seed ortholog is 100%.

Group of orthologs #752. Best score 58 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:58

Q4UH61              	100.00%		Q385S7              	100.00%
Bootstrap support for Q4UH61 as seed ortholog is 100%.
Bootstrap support for Q385S7 as seed ortholog is 100%.

Group of orthologs #753. Best score 58 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:58

Q4UDI6              	100.00%		Q38E26              	100.00%
Bootstrap support for Q4UDI6 as seed ortholog is 100%.
Bootstrap support for Q38E26 as seed ortholog is 100%.

Group of orthologs #754. Best score 58 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:58

Q4UIJ3              	100.00%		Q57V96              	100.00%
Bootstrap support for Q4UIJ3 as seed ortholog is 100%.
Bootstrap support for Q57V96 as seed ortholog is 100%.

Group of orthologs #755. Best score 58 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:6

Q4UG27              	100.00%		Q57Y52              	100.00%
Bootstrap support for Q4UG27 as seed ortholog is 100%.
Bootstrap support for Q57Y52 as seed ortholog is 61%.
Alternative seed ortholog is Q583J2 (6 bits away from this cluster)

Group of orthologs #756. Best score 58 bits
Score difference with first non-orthologous sequence - T.annulata:58 T.brucei:58

Q4UEV3              	100.00%		Q582Y0              	100.00%
Bootstrap support for Q4UEV3 as seed ortholog is 100%.
Bootstrap support for Q582Y0 as seed ortholog is 100%.

Group of orthologs #757. Best score 57 bits
Score difference with first non-orthologous sequence - T.annulata:57 T.brucei:57

Q4UAH0              	100.00%		Q388G3              	100.00%
Bootstrap support for Q4UAH0 as seed ortholog is 100%.
Bootstrap support for Q388G3 as seed ortholog is 100%.

Group of orthologs #758. Best score 57 bits
Score difference with first non-orthologous sequence - T.annulata:57 T.brucei:57

Q4UDQ7              	100.00%		Q384T7              	100.00%
Bootstrap support for Q4UDQ7 as seed ortholog is 100%.
Bootstrap support for Q384T7 as seed ortholog is 100%.

Group of orthologs #759. Best score 57 bits
Score difference with first non-orthologous sequence - T.annulata:57 T.brucei:57

Q4UGH4              	100.00%		Q384M6              	100.00%
Bootstrap support for Q4UGH4 as seed ortholog is 100%.
Bootstrap support for Q384M6 as seed ortholog is 100%.

Group of orthologs #760. Best score 57 bits
Score difference with first non-orthologous sequence - T.annulata:57 T.brucei:57

Q4UA34              	100.00%		Q57YM0              	100.00%
Bootstrap support for Q4UA34 as seed ortholog is 100%.
Bootstrap support for Q57YM0 as seed ortholog is 100%.

Group of orthologs #761. Best score 57 bits
Score difference with first non-orthologous sequence - T.annulata:57 T.brucei:57

Q4UIU5              	100.00%		Q57WP9              	100.00%
Bootstrap support for Q4UIU5 as seed ortholog is 100%.
Bootstrap support for Q57WP9 as seed ortholog is 100%.

Group of orthologs #762. Best score 56 bits
Score difference with first non-orthologous sequence - T.annulata:56 T.brucei:56

Q4UAF9              	100.00%		Q383W6              	100.00%
                    	       		Q57UL5              	5.71%
Bootstrap support for Q4UAF9 as seed ortholog is 100%.
Bootstrap support for Q383W6 as seed ortholog is 100%.

Group of orthologs #763. Best score 56 bits
Score difference with first non-orthologous sequence - T.annulata:56 T.brucei:56

Q4UAI9              	100.00%		Q387H0              	100.00%
Bootstrap support for Q4UAI9 as seed ortholog is 100%.
Bootstrap support for Q387H0 as seed ortholog is 100%.

Group of orthologs #764. Best score 56 bits
Score difference with first non-orthologous sequence - T.annulata:56 T.brucei:56

Q4UD30              	100.00%		Q386T9              	100.00%
Bootstrap support for Q4UD30 as seed ortholog is 100%.
Bootstrap support for Q386T9 as seed ortholog is 100%.

Group of orthologs #765. Best score 56 bits
Score difference with first non-orthologous sequence - T.annulata:56 T.brucei:56

Q4UID5              	100.00%		Q57W59              	100.00%
Bootstrap support for Q4UID5 as seed ortholog is 100%.
Bootstrap support for Q57W59 as seed ortholog is 100%.

Group of orthologs #766. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:55

Q4U9J5              	100.00%		Q382R3              	100.00%
Bootstrap support for Q4U9J5 as seed ortholog is 100%.
Bootstrap support for Q382R3 as seed ortholog is 100%.

Group of orthologs #767. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:55

Q4U9E5              	100.00%		Q387Z6              	100.00%
Bootstrap support for Q4U9E5 as seed ortholog is 100%.
Bootstrap support for Q387Z6 as seed ortholog is 100%.

Group of orthologs #768. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:55

Q4UIE3              	100.00%		D6XKM9              	100.00%
Bootstrap support for Q4UIE3 as seed ortholog is 100%.
Bootstrap support for D6XKM9 as seed ortholog is 100%.

Group of orthologs #769. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:12

Q4UIP4              	100.00%		Q383H5              	100.00%
Bootstrap support for Q4UIP4 as seed ortholog is 100%.
Bootstrap support for Q383H5 as seed ortholog is 66%.
Alternative seed ortholog is D7SGF1 (12 bits away from this cluster)

Group of orthologs #770. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:55

Q4UBS8              	100.00%		Q38G03              	100.00%
Bootstrap support for Q4UBS8 as seed ortholog is 100%.
Bootstrap support for Q38G03 as seed ortholog is 100%.

Group of orthologs #771. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:55

Q4UJ09              	100.00%		Q38A35              	100.00%
Bootstrap support for Q4UJ09 as seed ortholog is 100%.
Bootstrap support for Q38A35 as seed ortholog is 100%.

Group of orthologs #772. Best score 55 bits
Score difference with first non-orthologous sequence - T.annulata:55 T.brucei:55

Q4UGP7              	100.00%		Q57W53              	100.00%
Bootstrap support for Q4UGP7 as seed ortholog is 100%.
Bootstrap support for Q57W53 as seed ortholog is 100%.

Group of orthologs #773. Best score 54 bits
Score difference with first non-orthologous sequence - T.annulata:54 T.brucei:54

Q4UAN9              	100.00%		Q583W3              	100.00%
Bootstrap support for Q4UAN9 as seed ortholog is 100%.
Bootstrap support for Q583W3 as seed ortholog is 100%.

Group of orthologs #774. Best score 52 bits
Score difference with first non-orthologous sequence - T.annulata:52 T.brucei:52

Q4UBR6              	100.00%		Q382E1              	100.00%
Bootstrap support for Q4UBR6 as seed ortholog is 100%.
Bootstrap support for Q382E1 as seed ortholog is 100%.

Group of orthologs #775. Best score 52 bits
Score difference with first non-orthologous sequence - T.annulata:7 T.brucei:52

Q4UF56              	100.00%		Q382A6              	100.00%
Bootstrap support for Q4UF56 as seed ortholog is 64%.
Alternative seed ortholog is Q4UB53 (7 bits away from this cluster)
Bootstrap support for Q382A6 as seed ortholog is 100%.

Group of orthologs #776. Best score 52 bits
Score difference with first non-orthologous sequence - T.annulata:52 T.brucei:52

Q4UHK3              	100.00%		Q388D9              	100.00%
Bootstrap support for Q4UHK3 as seed ortholog is 100%.
Bootstrap support for Q388D9 as seed ortholog is 100%.

Group of orthologs #777. Best score 52 bits
Score difference with first non-orthologous sequence - T.annulata:52 T.brucei:52

Q4UCM2              	100.00%		Q57WC0              	100.00%
Bootstrap support for Q4UCM2 as seed ortholog is 100%.
Bootstrap support for Q57WC0 as seed ortholog is 100%.

Group of orthologs #778. Best score 51 bits
Score difference with first non-orthologous sequence - T.annulata:51 T.brucei:51

Q4UHK9              	100.00%		Q383F5              	100.00%
                    	       		Q583T1              	100.00%
Bootstrap support for Q4UHK9 as seed ortholog is 100%.
Bootstrap support for Q383F5 as seed ortholog is 100%.
Bootstrap support for Q583T1 as seed ortholog is 100%.

Group of orthologs #779. Best score 51 bits
Score difference with first non-orthologous sequence - T.annulata:51 T.brucei:51

Q4UG11              	100.00%		Q4GZD6              	100.00%
Bootstrap support for Q4UG11 as seed ortholog is 100%.
Bootstrap support for Q4GZD6 as seed ortholog is 100%.

Group of orthologs #780. Best score 50 bits
Score difference with first non-orthologous sequence - T.annulata:50 T.brucei:50

Q4UBA2              	100.00%		Q383I0              	100.00%
                    	       		Q587F6              	22.54%
                    	       		Q57XS6              	21.48%
                    	       		Q57ZM7              	9.15%
Bootstrap support for Q4UBA2 as seed ortholog is 100%.
Bootstrap support for Q383I0 as seed ortholog is 100%.

Group of orthologs #781. Best score 50 bits
Score difference with first non-orthologous sequence - T.annulata:50 T.brucei:6

Q4UFV3              	100.00%		Q38DL2              	100.00%
Bootstrap support for Q4UFV3 as seed ortholog is 100%.
Bootstrap support for Q38DL2 as seed ortholog is 57%.
Alternative seed ortholog is Q57WJ6 (6 bits away from this cluster)

Group of orthologs #782. Best score 49 bits
Score difference with first non-orthologous sequence - T.annulata:49 T.brucei:49

Q4UGQ5              	100.00%		Q387B5              	100.00%
                    	       		Q4GZ42              	100.00%
Bootstrap support for Q4UGQ5 as seed ortholog is 100%.
Bootstrap support for Q387B5 as seed ortholog is 100%.
Bootstrap support for Q4GZ42 as seed ortholog is 100%.

Group of orthologs #783. Best score 49 bits
Score difference with first non-orthologous sequence - T.annulata:49 T.brucei:49

Q4UE48              	100.00%		Q38D90              	100.00%
Bootstrap support for Q4UE48 as seed ortholog is 100%.
Bootstrap support for Q38D90 as seed ortholog is 100%.

Group of orthologs #784. Best score 48 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4UBR9              	100.00%		Q384C6              	100.00%
Q4UB25              	5.37%		Q384C7              	92.72%
                    	       		Q384C5              	92.16%
                    	       		Q384C8              	91.32%
                    	       		Q384C9              	31.79%
Bootstrap support for Q4UBR9 as seed ortholog is 100%.
Bootstrap support for Q384C6 as seed ortholog is 100%.

Group of orthologs #785. Best score 48 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4U8W8              	100.00%		Q382X1              	100.00%
                    	       		Q387J8              	8.26%
Bootstrap support for Q4U8W8 as seed ortholog is 100%.
Bootstrap support for Q382X1 as seed ortholog is 100%.

Group of orthologs #786. Best score 48 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4UD22              	100.00%		Q38EN5              	100.00%
Bootstrap support for Q4UD22 as seed ortholog is 100%.
Bootstrap support for Q38EN5 as seed ortholog is 100%.

Group of orthologs #787. Best score 48 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4UF65              	100.00%		Q57WW9              	100.00%
Bootstrap support for Q4UF65 as seed ortholog is 100%.
Bootstrap support for Q57WW9 as seed ortholog is 100%.

Group of orthologs #788. Best score 48 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4UE61              	100.00%		Q580U8              	100.00%
Bootstrap support for Q4UE61 as seed ortholog is 100%.
Bootstrap support for Q580U8 as seed ortholog is 100%.

Group of orthologs #789. Best score 48 bits
Score difference with first non-orthologous sequence - T.annulata:48 T.brucei:48

Q4UDV7              	100.00%		Q586H1              	100.00%
Bootstrap support for Q4UDV7 as seed ortholog is 100%.
Bootstrap support for Q586H1 as seed ortholog is 100%.

Group of orthologs #790. Best score 47 bits
Score difference with first non-orthologous sequence - T.annulata:47 T.brucei:47

Q4UE82              	100.00%		Q38BI6              	100.00%
Bootstrap support for Q4UE82 as seed ortholog is 100%.
Bootstrap support for Q38BI6 as seed ortholog is 100%.

Group of orthologs #791. Best score 47 bits
Score difference with first non-orthologous sequence - T.annulata:47 T.brucei:47

Q4UC78              	100.00%		Q38DS6              	100.00%
Bootstrap support for Q4UC78 as seed ortholog is 100%.
Bootstrap support for Q38DS6 as seed ortholog is 100%.

Group of orthologs #792. Best score 47 bits
Score difference with first non-orthologous sequence - T.annulata:47 T.brucei:47

Q4U951              	100.00%		Q57X28              	100.00%
Bootstrap support for Q4U951 as seed ortholog is 100%.
Bootstrap support for Q57X28 as seed ortholog is 100%.

Group of orthologs #793. Best score 47 bits
Score difference with first non-orthologous sequence - T.annulata:47 T.brucei:47

Q4UCA8              	100.00%		Q585Y5              	100.00%
Bootstrap support for Q4UCA8 as seed ortholog is 100%.
Bootstrap support for Q585Y5 as seed ortholog is 100%.

Group of orthologs #794. Best score 47 bits
Score difference with first non-orthologous sequence - T.annulata:47 T.brucei:47

Q4UG16              	100.00%		Q584S1              	100.00%
Bootstrap support for Q4UG16 as seed ortholog is 100%.
Bootstrap support for Q584S1 as seed ortholog is 100%.

Group of orthologs #795. Best score 46 bits
Score difference with first non-orthologous sequence - T.annulata:46 T.brucei:6

Q4UGS2              	100.00%		Q389D4              	100.00%
                    	       		Q389D3              	81.54%
                    	       		Q57U22              	30.77%
Bootstrap support for Q4UGS2 as seed ortholog is 100%.
Bootstrap support for Q389D4 as seed ortholog is 38%.
Alternative seed ortholog is Q57XJ8 (6 bits away from this cluster)

Group of orthologs #796. Best score 46 bits
Score difference with first non-orthologous sequence - T.annulata:46 T.brucei:46

Q4UGB6              	100.00%		Q388I9              	100.00%
Bootstrap support for Q4UGB6 as seed ortholog is 100%.
Bootstrap support for Q388I9 as seed ortholog is 100%.

Group of orthologs #797. Best score 45 bits
Score difference with first non-orthologous sequence - T.annulata:45 T.brucei:4

Q4UIT2              	100.00%		Q38CC0              	100.00%
Bootstrap support for Q4UIT2 as seed ortholog is 100%.
Bootstrap support for Q38CC0 as seed ortholog is 50%.
Alternative seed ortholog is Q580E6 (4 bits away from this cluster)

Group of orthologs #798. Best score 45 bits
Score difference with first non-orthologous sequence - T.annulata:45 T.brucei:45

Q4UDG3              	100.00%		Q584Z4              	100.00%
Bootstrap support for Q4UDG3 as seed ortholog is 100%.
Bootstrap support for Q584Z4 as seed ortholog is 100%.

Group of orthologs #799. Best score 44 bits
Score difference with first non-orthologous sequence - T.annulata:44 T.brucei:44

Q4UEL0              	100.00%		Q585P2              	100.00%
Bootstrap support for Q4UEL0 as seed ortholog is 100%.
Bootstrap support for Q585P2 as seed ortholog is 100%.

Group of orthologs #800. Best score 43 bits
Score difference with first non-orthologous sequence - T.annulata:43 T.brucei:43

Q4UHR2              	100.00%		Q38DC8              	100.00%
Bootstrap support for Q4UHR2 as seed ortholog is 100%.
Bootstrap support for Q38DC8 as seed ortholog is 100%.

Group of orthologs #801. Best score 42 bits
Score difference with first non-orthologous sequence - T.annulata:42 T.brucei:42

Q4UIS6              	100.00%		Q384H5              	100.00%
Q4UIS1              	61.30%		Q384S8              	16.67%
Q4UIS0              	33.20%		
Q4UIS4              	32.81%		
Q4UIR9              	32.02%		
Q4UIR8              	30.84%		
Q4UI51              	27.31%		
Q4UIS5              	18.07%		
Q4UFK1              	10.02%		
Bootstrap support for Q4UIS6 as seed ortholog is 100%.
Bootstrap support for Q384H5 as seed ortholog is 100%.

Group of orthologs #802. Best score 42 bits
Score difference with first non-orthologous sequence - T.annulata:42 T.brucei:42

Q4UHJ9              	100.00%		Q57Y40              	100.00%
Q4UB48              	23.66%		Q57U43              	79.71%
Bootstrap support for Q4UHJ9 as seed ortholog is 100%.
Bootstrap support for Q57Y40 as seed ortholog is 100%.