###################################
2708 groups of orthologs
4329 in-paralogs from L.chalumnae
3622 in-paralogs from P.ramorum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 4151 bits
Score difference with first non-orthologous sequence - L.chalumnae:2697 P.ramorum:2251

H3BAL0              	100.00%		H3G8E7              	100.00%
Bootstrap support for H3BAL0 as seed ortholog is 100%.
Bootstrap support for H3G8E7 as seed ortholog is 100%.

Group of orthologs #2. Best score 3787 bits
Score difference with first non-orthologous sequence - L.chalumnae:3787 P.ramorum:3787

H3AQI5              	100.00%		H3G8I9              	100.00%
Bootstrap support for H3AQI5 as seed ortholog is 100%.
Bootstrap support for H3G8I9 as seed ortholog is 100%.

Group of orthologs #3. Best score 3775 bits
Score difference with first non-orthologous sequence - L.chalumnae:3121 P.ramorum:2488

H3B1H3              	100.00%		H3GM82              	100.00%
Bootstrap support for H3B1H3 as seed ortholog is 100%.
Bootstrap support for H3GM82 as seed ortholog is 100%.

Group of orthologs #4. Best score 3557 bits
Score difference with first non-orthologous sequence - L.chalumnae:2847 P.ramorum:616

H3BFH9              	100.00%		H3GXS3              	100.00%
                    	       		H3G6G1              	15.23%
Bootstrap support for H3BFH9 as seed ortholog is 100%.
Bootstrap support for H3GXS3 as seed ortholog is 100%.

Group of orthologs #5. Best score 3062 bits
Score difference with first non-orthologous sequence - L.chalumnae:1456 P.ramorum:1078

H2ZZW7              	100.00%		H3GEN5              	100.00%
H2ZXC8              	16.04%		
Bootstrap support for H2ZZW7 as seed ortholog is 100%.
Bootstrap support for H3GEN5 as seed ortholog is 100%.

Group of orthologs #6. Best score 3017 bits
Score difference with first non-orthologous sequence - L.chalumnae:789 P.ramorum:150

H2ZU75              	100.00%		H3G9Y8              	100.00%
Bootstrap support for H2ZU75 as seed ortholog is 100%.
Bootstrap support for H3G9Y8 as seed ortholog is 90%.

Group of orthologs #7. Best score 2795 bits
Score difference with first non-orthologous sequence - L.chalumnae:1671 P.ramorum:642

H3BBD5              	100.00%		H3HCG5              	100.00%
H2ZZM9              	29.46%		H3GR96              	16.75%
H3ASB2              	24.39%		
H3A2B2              	22.75%		
Bootstrap support for H3BBD5 as seed ortholog is 100%.
Bootstrap support for H3HCG5 as seed ortholog is 100%.

Group of orthologs #8. Best score 2738 bits
Score difference with first non-orthologous sequence - L.chalumnae:1146 P.ramorum:1126

H3A7W8              	100.00%		H3G6N0              	100.00%
Bootstrap support for H3A7W8 as seed ortholog is 100%.
Bootstrap support for H3G6N0 as seed ortholog is 100%.

Group of orthologs #9. Best score 1884 bits
Score difference with first non-orthologous sequence - L.chalumnae:1884 P.ramorum:835

H2ZS81              	100.00%		H3G6V1              	100.00%
Bootstrap support for H2ZS81 as seed ortholog is 100%.
Bootstrap support for H3G6V1 as seed ortholog is 100%.

Group of orthologs #10. Best score 1752 bits
Score difference with first non-orthologous sequence - L.chalumnae:1752 P.ramorum:1147

H3AN14              	100.00%		H3G958              	100.00%
H3AKV2              	54.00%		
Bootstrap support for H3AN14 as seed ortholog is 100%.
Bootstrap support for H3G958 as seed ortholog is 100%.

Group of orthologs #11. Best score 1742 bits
Score difference with first non-orthologous sequence - L.chalumnae:1742 P.ramorum:1742

H3AVP5              	100.00%		H3GA78              	100.00%
Bootstrap support for H3AVP5 as seed ortholog is 100%.
Bootstrap support for H3GA78 as seed ortholog is 100%.

Group of orthologs #12. Best score 1620 bits
Score difference with first non-orthologous sequence - L.chalumnae:1620 P.ramorum:1620

H3BCH2              	100.00%		H3G7C4              	100.00%
Bootstrap support for H3BCH2 as seed ortholog is 100%.
Bootstrap support for H3G7C4 as seed ortholog is 100%.

Group of orthologs #13. Best score 1603 bits
Score difference with first non-orthologous sequence - L.chalumnae:1603 P.ramorum:1603

H3AU80              	100.00%		H3GWA7              	100.00%
H3BFJ1              	41.40%		
Bootstrap support for H3AU80 as seed ortholog is 100%.
Bootstrap support for H3GWA7 as seed ortholog is 100%.

Group of orthologs #14. Best score 1553 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:1553

H3AH65              	100.00%		H3G6H0              	100.00%
Bootstrap support for H3AH65 as seed ortholog is 89%.
Bootstrap support for H3G6H0 as seed ortholog is 100%.

Group of orthologs #15. Best score 1519 bits
Score difference with first non-orthologous sequence - L.chalumnae:1519 P.ramorum:1519

H3B4L8              	100.00%		H3G976              	100.00%
Bootstrap support for H3B4L8 as seed ortholog is 100%.
Bootstrap support for H3G976 as seed ortholog is 100%.

Group of orthologs #16. Best score 1487 bits
Score difference with first non-orthologous sequence - L.chalumnae:1487 P.ramorum:1302

H3A0Y3              	100.00%		H3GA07              	100.00%
Bootstrap support for H3A0Y3 as seed ortholog is 100%.
Bootstrap support for H3GA07 as seed ortholog is 100%.

Group of orthologs #17. Best score 1435 bits
Score difference with first non-orthologous sequence - L.chalumnae:643 P.ramorum:994

H3AMW9              	100.00%		H3HBY2              	100.00%
Bootstrap support for H3AMW9 as seed ortholog is 100%.
Bootstrap support for H3HBY2 as seed ortholog is 100%.

Group of orthologs #18. Best score 1376 bits
Score difference with first non-orthologous sequence - L.chalumnae:1376 P.ramorum:1265

H3BBW8              	100.00%		H3G9F7              	100.00%
Bootstrap support for H3BBW8 as seed ortholog is 100%.
Bootstrap support for H3G9F7 as seed ortholog is 100%.

Group of orthologs #19. Best score 1353 bits
Score difference with first non-orthologous sequence - L.chalumnae:741 P.ramorum:606

H2ZX54              	100.00%		H3G987              	100.00%
Bootstrap support for H2ZX54 as seed ortholog is 100%.
Bootstrap support for H3G987 as seed ortholog is 100%.

Group of orthologs #20. Best score 1342 bits
Score difference with first non-orthologous sequence - L.chalumnae:1342 P.ramorum:1342

H2ZUU5              	100.00%		H3GAQ5              	100.00%
Bootstrap support for H2ZUU5 as seed ortholog is 100%.
Bootstrap support for H3GAQ5 as seed ortholog is 100%.

Group of orthologs #21. Best score 1305 bits
Score difference with first non-orthologous sequence - L.chalumnae:1305 P.ramorum:1305

H3B9U9              	100.00%		H3G8D7              	100.00%
Bootstrap support for H3B9U9 as seed ortholog is 100%.
Bootstrap support for H3G8D7 as seed ortholog is 100%.

Group of orthologs #22. Best score 1299 bits
Score difference with first non-orthologous sequence - L.chalumnae:1299 P.ramorum:1299

H3BGV0              	100.00%		H3G8F7              	100.00%
Bootstrap support for H3BGV0 as seed ortholog is 100%.
Bootstrap support for H3G8F7 as seed ortholog is 100%.

Group of orthologs #23. Best score 1212 bits
Score difference with first non-orthologous sequence - L.chalumnae:1212 P.ramorum:1212

H3AK74              	100.00%		H3G9M7              	100.00%
Bootstrap support for H3AK74 as seed ortholog is 100%.
Bootstrap support for H3G9M7 as seed ortholog is 100%.

Group of orthologs #24. Best score 1168 bits
Score difference with first non-orthologous sequence - L.chalumnae:1168 P.ramorum:1168

H3B0N9              	100.00%		H3G7I2              	100.00%
Bootstrap support for H3B0N9 as seed ortholog is 100%.
Bootstrap support for H3G7I2 as seed ortholog is 100%.

Group of orthologs #25. Best score 1164 bits
Score difference with first non-orthologous sequence - L.chalumnae:1164 P.ramorum:1164

H3AX27              	100.00%		H3G9Y5              	100.00%
Bootstrap support for H3AX27 as seed ortholog is 100%.
Bootstrap support for H3G9Y5 as seed ortholog is 100%.

Group of orthologs #26. Best score 1154 bits
Score difference with first non-orthologous sequence - L.chalumnae:1154 P.ramorum:1154

H3A6E7              	100.00%		H3G9W7              	100.00%
Bootstrap support for H3A6E7 as seed ortholog is 100%.
Bootstrap support for H3G9W7 as seed ortholog is 100%.

Group of orthologs #27. Best score 1149 bits
Score difference with first non-orthologous sequence - L.chalumnae:1149 P.ramorum:225

H3A5L4              	100.00%		H3G7M6              	100.00%
H3ALH9              	40.94%		
Bootstrap support for H3A5L4 as seed ortholog is 100%.
Bootstrap support for H3G7M6 as seed ortholog is 99%.

Group of orthologs #28. Best score 1147 bits
Score difference with first non-orthologous sequence - L.chalumnae:1147 P.ramorum:1036

H3AYF8              	100.00%		H3G917              	100.00%
Bootstrap support for H3AYF8 as seed ortholog is 100%.
Bootstrap support for H3G917 as seed ortholog is 100%.

Group of orthologs #29. Best score 1079 bits
Score difference with first non-orthologous sequence - L.chalumnae:1079 P.ramorum:1079

H3A6N0              	100.00%		H3G8I7              	100.00%
H3ASK6              	80.19%		
Bootstrap support for H3A6N0 as seed ortholog is 100%.
Bootstrap support for H3G8I7 as seed ortholog is 100%.

Group of orthologs #30. Best score 1072 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:735

H3AWB6              	100.00%		H3G7S3              	100.00%
Bootstrap support for H3AWB6 as seed ortholog is 99%.
Bootstrap support for H3G7S3 as seed ortholog is 100%.

Group of orthologs #31. Best score 1054 bits
Score difference with first non-orthologous sequence - L.chalumnae:755 P.ramorum:417

H3AKY2              	100.00%		H3GEP5              	100.00%
                    	       		H3H7Q1              	96.08%
                    	       		H3G6A8              	23.64%
Bootstrap support for H3AKY2 as seed ortholog is 100%.
Bootstrap support for H3GEP5 as seed ortholog is 100%.

Group of orthologs #32. Best score 1023 bits
Score difference with first non-orthologous sequence - L.chalumnae:1023 P.ramorum:1023

H3ALQ7              	100.00%		H3G7T4              	100.00%
Bootstrap support for H3ALQ7 as seed ortholog is 100%.
Bootstrap support for H3G7T4 as seed ortholog is 100%.

Group of orthologs #33. Best score 1017 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.ramorum:347

H2ZXQ2              	100.00%		H3G877              	100.00%
H3ARY3              	20.61%		
Bootstrap support for H2ZXQ2 as seed ortholog is 100%.
Bootstrap support for H3G877 as seed ortholog is 100%.

Group of orthologs #34. Best score 1014 bits
Score difference with first non-orthologous sequence - L.chalumnae:1014 P.ramorum:1014

H3BDR2              	100.00%		H3G8E6              	100.00%
Bootstrap support for H3BDR2 as seed ortholog is 100%.
Bootstrap support for H3G8E6 as seed ortholog is 100%.

Group of orthologs #35. Best score 1011 bits
Score difference with first non-orthologous sequence - L.chalumnae:1011 P.ramorum:1011

H3AI30              	100.00%		H3GA16              	100.00%
Bootstrap support for H3AI30 as seed ortholog is 100%.
Bootstrap support for H3GA16 as seed ortholog is 100%.

Group of orthologs #36. Best score 1007 bits
Score difference with first non-orthologous sequence - L.chalumnae:1007 P.ramorum:1007

H3A1H0              	100.00%		H3GA27              	100.00%
Bootstrap support for H3A1H0 as seed ortholog is 100%.
Bootstrap support for H3GA27 as seed ortholog is 100%.

Group of orthologs #37. Best score 998 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:308

H2ZV91              	100.00%		H3GB49              	100.00%
H3AB35              	66.42%		H3GB15              	79.00%
H2ZV15              	39.42%		H3G9G6              	21.00%
H3AWU4              	35.77%		
H3B4D4              	27.74%		
Bootstrap support for H2ZV91 as seed ortholog is 99%.
Bootstrap support for H3GB49 as seed ortholog is 100%.

Group of orthologs #38. Best score 997 bits
Score difference with first non-orthologous sequence - L.chalumnae:997 P.ramorum:997

H3B666              	100.00%		H3GAM4              	100.00%
Bootstrap support for H3B666 as seed ortholog is 100%.
Bootstrap support for H3GAM4 as seed ortholog is 100%.

Group of orthologs #39. Best score 989 bits
Score difference with first non-orthologous sequence - L.chalumnae:989 P.ramorum:989

H3AKC9              	100.00%		H3G8G6              	100.00%
Bootstrap support for H3AKC9 as seed ortholog is 100%.
Bootstrap support for H3G8G6 as seed ortholog is 100%.

Group of orthologs #40. Best score 985 bits
Score difference with first non-orthologous sequence - L.chalumnae:985 P.ramorum:985

H3AIW6              	100.00%		H3G9D6              	100.00%
Bootstrap support for H3AIW6 as seed ortholog is 100%.
Bootstrap support for H3G9D6 as seed ortholog is 100%.

Group of orthologs #41. Best score 982 bits
Score difference with first non-orthologous sequence - L.chalumnae:982 P.ramorum:982

H3AQ38              	100.00%		H3G966              	100.00%
H2ZTU7              	47.77%		
H3B357              	38.85%		
Bootstrap support for H3AQ38 as seed ortholog is 100%.
Bootstrap support for H3G966 as seed ortholog is 100%.

Group of orthologs #42. Best score 982 bits
Score difference with first non-orthologous sequence - L.chalumnae:982 P.ramorum:873

H3AZ66              	100.00%		H3GWQ1              	100.00%
Bootstrap support for H3AZ66 as seed ortholog is 100%.
Bootstrap support for H3GWQ1 as seed ortholog is 100%.

Group of orthologs #43. Best score 981 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.ramorum:392

H3AYQ6              	100.00%		H3G7A2              	100.00%
Bootstrap support for H3AYQ6 as seed ortholog is 100%.
Bootstrap support for H3G7A2 as seed ortholog is 100%.

Group of orthologs #44. Best score 967 bits
Score difference with first non-orthologous sequence - L.chalumnae:967 P.ramorum:967

H3BGE5              	100.00%		H3GZH1              	100.00%
Bootstrap support for H3BGE5 as seed ortholog is 100%.
Bootstrap support for H3GZH1 as seed ortholog is 100%.

Group of orthologs #45. Best score 965 bits
Score difference with first non-orthologous sequence - L.chalumnae:965 P.ramorum:965

H3AL63              	100.00%		H3G8D6              	100.00%
Bootstrap support for H3AL63 as seed ortholog is 100%.
Bootstrap support for H3G8D6 as seed ortholog is 100%.

Group of orthologs #46. Best score 965 bits
Score difference with first non-orthologous sequence - L.chalumnae:965 P.ramorum:965

M3XKA5              	100.00%		H3G5Z2              	100.00%
Bootstrap support for M3XKA5 as seed ortholog is 100%.
Bootstrap support for H3G5Z2 as seed ortholog is 100%.

Group of orthologs #47. Best score 955 bits
Score difference with first non-orthologous sequence - L.chalumnae:844 P.ramorum:539

H3ANB8              	100.00%		H3G9P7              	100.00%
M3XI19              	64.45%		
H3BDY4              	59.47%		
H2ZU49              	51.13%		
Bootstrap support for H3ANB8 as seed ortholog is 100%.
Bootstrap support for H3G9P7 as seed ortholog is 100%.

Group of orthologs #48. Best score 945 bits
Score difference with first non-orthologous sequence - L.chalumnae:641 P.ramorum:547

H3A0V7              	100.00%		H3GA38              	100.00%
H3BCT1              	56.79%		
Bootstrap support for H3A0V7 as seed ortholog is 100%.
Bootstrap support for H3GA38 as seed ortholog is 100%.

Group of orthologs #49. Best score 944 bits
Score difference with first non-orthologous sequence - L.chalumnae:944 P.ramorum:944

H3AKV9              	100.00%		H3G6X8              	100.00%
Bootstrap support for H3AKV9 as seed ortholog is 100%.
Bootstrap support for H3G6X8 as seed ortholog is 100%.

Group of orthologs #50. Best score 942 bits
Score difference with first non-orthologous sequence - L.chalumnae:942 P.ramorum:942

H3AM97              	100.00%		H3G5P5              	100.00%
Bootstrap support for H3AM97 as seed ortholog is 100%.
Bootstrap support for H3G5P5 as seed ortholog is 100%.

Group of orthologs #51. Best score 937 bits
Score difference with first non-orthologous sequence - L.chalumnae:811 P.ramorum:341

H3A9B9              	100.00%		H3GQ90              	100.00%
H3ADK4              	100.00%		H3GRQ9              	44.68%
H3BI64              	63.60%		
H3AUN5              	62.30%		
Bootstrap support for H3A9B9 as seed ortholog is 100%.
Bootstrap support for H3ADK4 as seed ortholog is 100%.
Bootstrap support for H3GQ90 as seed ortholog is 100%.

Group of orthologs #52. Best score 926 bits
Score difference with first non-orthologous sequence - L.chalumnae:770 P.ramorum:290

H3B5X3              	100.00%		H3GAQ3              	100.00%
Bootstrap support for H3B5X3 as seed ortholog is 100%.
Bootstrap support for H3GAQ3 as seed ortholog is 99%.

Group of orthologs #53. Best score 916 bits
Score difference with first non-orthologous sequence - L.chalumnae:916 P.ramorum:916

H3A0U9              	100.00%		H3HBF0              	100.00%
Bootstrap support for H3A0U9 as seed ortholog is 100%.
Bootstrap support for H3HBF0 as seed ortholog is 100%.

Group of orthologs #54. Best score 892 bits
Score difference with first non-orthologous sequence - L.chalumnae:892 P.ramorum:892

H3A831              	100.00%		H3GTK1              	100.00%
H3AD52              	21.66%		
Bootstrap support for H3A831 as seed ortholog is 100%.
Bootstrap support for H3GTK1 as seed ortholog is 100%.

Group of orthologs #55. Best score 892 bits
Score difference with first non-orthologous sequence - L.chalumnae:892 P.ramorum:892

H2ZSL2              	100.00%		H3GJ85              	100.00%
Bootstrap support for H2ZSL2 as seed ortholog is 100%.
Bootstrap support for H3GJ85 as seed ortholog is 100%.

Group of orthologs #56. Best score 890 bits
Score difference with first non-orthologous sequence - L.chalumnae:418 P.ramorum:46

H3AEE1              	100.00%		H3GSL8              	100.00%
H3BAQ9              	76.39%		
Bootstrap support for H3AEE1 as seed ortholog is 100%.
Bootstrap support for H3GSL8 as seed ortholog is 67%.
Alternative seed ortholog is H3GTJ9 (46 bits away from this cluster)

Group of orthologs #57. Best score 886 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.ramorum:388

H3AJZ5              	100.00%		H3GWY5              	100.00%
H3AJR4              	38.60%		H3GYZ5              	58.31%
H3B4F4              	38.14%		H3GYZ4              	56.19%
H3AIP5              	36.91%		H3GZ00              	42.36%
H3AAY4              	11.70%		H3GK29              	41.79%
H3B2R0              	5.88%		H3GSM3              	40.04%
                    	       		H3GYZ7              	31.37%
                    	       		H3H5H8              	24.42%
Bootstrap support for H3AJZ5 as seed ortholog is 99%.
Bootstrap support for H3GWY5 as seed ortholog is 100%.

Group of orthologs #58. Best score 881 bits
Score difference with first non-orthologous sequence - L.chalumnae:881 P.ramorum:751

H3AXQ5              	100.00%		H3GHV2              	100.00%
Bootstrap support for H3AXQ5 as seed ortholog is 100%.
Bootstrap support for H3GHV2 as seed ortholog is 100%.

Group of orthologs #59. Best score 868 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:233

H3BFV4              	100.00%		H3G860              	100.00%
Bootstrap support for H3BFV4 as seed ortholog is 100%.
Bootstrap support for H3G860 as seed ortholog is 100%.

Group of orthologs #60. Best score 866 bits
Score difference with first non-orthologous sequence - L.chalumnae:810 P.ramorum:492

H2ZW56              	100.00%		H3G603              	100.00%
H3AXY8              	57.78%		
H2ZT16              	35.62%		
H3A0Q6              	29.43%		
Bootstrap support for H2ZW56 as seed ortholog is 100%.
Bootstrap support for H3G603 as seed ortholog is 100%.

Group of orthologs #61. Best score 861 bits
Score difference with first non-orthologous sequence - L.chalumnae:861 P.ramorum:205

H3AQQ2              	100.00%		H3GAB7              	100.00%
H3BAN4              	10.63%		
Bootstrap support for H3AQQ2 as seed ortholog is 100%.
Bootstrap support for H3GAB7 as seed ortholog is 99%.

Group of orthologs #62. Best score 860 bits
Score difference with first non-orthologous sequence - L.chalumnae:860 P.ramorum:860

H3ARS4              	100.00%		H3GUY1              	100.00%
Bootstrap support for H3ARS4 as seed ortholog is 100%.
Bootstrap support for H3GUY1 as seed ortholog is 100%.

Group of orthologs #63. Best score 855 bits
Score difference with first non-orthologous sequence - L.chalumnae:640 P.ramorum:855

H3B5L6              	100.00%		H3G5M3              	100.00%
Bootstrap support for H3B5L6 as seed ortholog is 100%.
Bootstrap support for H3G5M3 as seed ortholog is 100%.

Group of orthologs #64. Best score 854 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.ramorum:165

H3AEU0              	100.00%		H3G933              	100.00%
Bootstrap support for H3AEU0 as seed ortholog is 100%.
Bootstrap support for H3G933 as seed ortholog is 99%.

Group of orthologs #65. Best score 853 bits
Score difference with first non-orthologous sequence - L.chalumnae:775 P.ramorum:853

H3AP88              	100.00%		H3GHV9              	100.00%
Bootstrap support for H3AP88 as seed ortholog is 100%.
Bootstrap support for H3GHV9 as seed ortholog is 100%.

Group of orthologs #66. Best score 848 bits
Score difference with first non-orthologous sequence - L.chalumnae:345 P.ramorum:521

H3AHV5              	100.00%		H3GUQ8              	100.00%
                    	       		H3H8P0              	23.99%
Bootstrap support for H3AHV5 as seed ortholog is 100%.
Bootstrap support for H3GUQ8 as seed ortholog is 100%.

Group of orthologs #67. Best score 847 bits
Score difference with first non-orthologous sequence - L.chalumnae:847 P.ramorum:847

H3A431              	100.00%		H3HCY3              	100.00%
H3ARN0              	30.71%		
Bootstrap support for H3A431 as seed ortholog is 100%.
Bootstrap support for H3HCY3 as seed ortholog is 100%.

Group of orthologs #68. Best score 842 bits
Score difference with first non-orthologous sequence - L.chalumnae:630 P.ramorum:89

H2ZY13              	100.00%		H3G8G1              	100.00%
H3AJ76              	25.66%		
Bootstrap support for H2ZY13 as seed ortholog is 100%.
Bootstrap support for H3G8G1 as seed ortholog is 90%.

Group of orthologs #69. Best score 839 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:569

H3A7C7              	100.00%		H3GAD7              	100.00%
H3B4P9              	77.14%		
H3A954              	75.71%		
H3ASR3              	70.00%		
H3AS44              	38.57%		
Bootstrap support for H3A7C7 as seed ortholog is 93%.
Bootstrap support for H3GAD7 as seed ortholog is 100%.

Group of orthologs #70. Best score 836 bits
Score difference with first non-orthologous sequence - L.chalumnae:836 P.ramorum:662

H3AEC4              	100.00%		H3GIQ9              	100.00%
Bootstrap support for H3AEC4 as seed ortholog is 100%.
Bootstrap support for H3GIQ9 as seed ortholog is 100%.

Group of orthologs #71. Best score 826 bits
Score difference with first non-orthologous sequence - L.chalumnae:770 P.ramorum:770

H3B017              	100.00%		H3G7J9              	100.00%
Bootstrap support for H3B017 as seed ortholog is 100%.
Bootstrap support for H3G7J9 as seed ortholog is 100%.

Group of orthologs #72. Best score 824 bits
Score difference with first non-orthologous sequence - L.chalumnae:473 P.ramorum:412

H3A782              	100.00%		H3G795              	100.00%
Bootstrap support for H3A782 as seed ortholog is 100%.
Bootstrap support for H3G795 as seed ortholog is 100%.

Group of orthologs #73. Best score 821 bits
Score difference with first non-orthologous sequence - L.chalumnae:821 P.ramorum:821

H3AHD8              	100.00%		H3G9B0              	100.00%
Bootstrap support for H3AHD8 as seed ortholog is 100%.
Bootstrap support for H3G9B0 as seed ortholog is 100%.

Group of orthologs #74. Best score 821 bits
Score difference with first non-orthologous sequence - L.chalumnae:821 P.ramorum:821

H3AV91              	100.00%		H3GQP2              	100.00%
Bootstrap support for H3AV91 as seed ortholog is 100%.
Bootstrap support for H3GQP2 as seed ortholog is 100%.

Group of orthologs #75. Best score 820 bits
Score difference with first non-orthologous sequence - L.chalumnae:820 P.ramorum:820

M3XI54              	100.00%		H3H3C1              	100.00%
Bootstrap support for M3XI54 as seed ortholog is 100%.
Bootstrap support for H3H3C1 as seed ortholog is 100%.

Group of orthologs #76. Best score 816 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:279

H3AF19              	100.00%		H3G9Y4              	100.00%
H3BI79              	92.79%		H3G7E9              	86.14%
H3BI74              	90.99%		H3G9X9              	43.56%
H3BI69              	77.48%		H3G7E7              	35.64%
H3AW62              	67.57%		H3G9Y0              	28.71%
H3AGU3              	57.66%		
H3BF86              	26.13%		
Bootstrap support for H3AF19 as seed ortholog is 99%.
Bootstrap support for H3G9Y4 as seed ortholog is 100%.

Group of orthologs #77. Best score 814 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:113

M3XIT3              	100.00%		H3GKM1              	100.00%
H2ZW74              	18.11%		
Bootstrap support for M3XIT3 as seed ortholog is 82%.
Bootstrap support for H3GKM1 as seed ortholog is 95%.

Group of orthologs #78. Best score 810 bits
Score difference with first non-orthologous sequence - L.chalumnae:734 P.ramorum:361

H3AHX2              	100.00%		H3GAX1              	100.00%
H3AEX1              	12.82%		
Bootstrap support for H3AHX2 as seed ortholog is 100%.
Bootstrap support for H3GAX1 as seed ortholog is 100%.

Group of orthologs #79. Best score 805 bits
Score difference with first non-orthologous sequence - L.chalumnae:805 P.ramorum:805

H3AXQ9              	100.00%		H3GTJ1              	100.00%
Bootstrap support for H3AXQ9 as seed ortholog is 100%.
Bootstrap support for H3GTJ1 as seed ortholog is 100%.

Group of orthologs #80. Best score 800 bits
Score difference with first non-orthologous sequence - L.chalumnae:800 P.ramorum:800

H3ADM6              	100.00%		H3G9I8              	100.00%
Bootstrap support for H3ADM6 as seed ortholog is 100%.
Bootstrap support for H3G9I8 as seed ortholog is 100%.

Group of orthologs #81. Best score 794 bits
Score difference with first non-orthologous sequence - L.chalumnae:794 P.ramorum:245

M3XI17              	100.00%		H3G5Z3              	100.00%
Bootstrap support for M3XI17 as seed ortholog is 100%.
Bootstrap support for H3G5Z3 as seed ortholog is 100%.

Group of orthologs #82. Best score 790 bits
Score difference with first non-orthologous sequence - L.chalumnae:790 P.ramorum:790

H3AFR8              	100.00%		H3GRC1              	100.00%
H3B7D9              	65.48%		
Bootstrap support for H3AFR8 as seed ortholog is 100%.
Bootstrap support for H3GRC1 as seed ortholog is 100%.

Group of orthologs #83. Best score 790 bits
Score difference with first non-orthologous sequence - L.chalumnae:790 P.ramorum:790

H3AVF4              	100.00%		H3GAK8              	100.00%
Bootstrap support for H3AVF4 as seed ortholog is 100%.
Bootstrap support for H3GAK8 as seed ortholog is 100%.

Group of orthologs #84. Best score 786 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.ramorum:190

H3AG06              	100.00%		H3GBZ6              	100.00%
Bootstrap support for H3AG06 as seed ortholog is 99%.
Bootstrap support for H3GBZ6 as seed ortholog is 99%.

Group of orthologs #85. Best score 785 bits
Score difference with first non-orthologous sequence - L.chalumnae:785 P.ramorum:785

H3BGX8              	100.00%		H3G968              	100.00%
Bootstrap support for H3BGX8 as seed ortholog is 100%.
Bootstrap support for H3G968 as seed ortholog is 100%.

Group of orthologs #86. Best score 781 bits
Score difference with first non-orthologous sequence - L.chalumnae:781 P.ramorum:781

H3AWH5              	100.00%		H3GAM6              	100.00%
H3AW35              	58.34%		
Bootstrap support for H3AWH5 as seed ortholog is 100%.
Bootstrap support for H3GAM6 as seed ortholog is 100%.

Group of orthologs #87. Best score 780 bits
Score difference with first non-orthologous sequence - L.chalumnae:780 P.ramorum:780

H3AG44              	100.00%		H3G930              	100.00%
H3AIC7              	68.33%		
Bootstrap support for H3AG44 as seed ortholog is 100%.
Bootstrap support for H3G930 as seed ortholog is 100%.

Group of orthologs #88. Best score 773 bits
Score difference with first non-orthologous sequence - L.chalumnae:645 P.ramorum:642

H3AUZ5              	100.00%		H3G9W6              	100.00%
Bootstrap support for H3AUZ5 as seed ortholog is 100%.
Bootstrap support for H3G9W6 as seed ortholog is 100%.

Group of orthologs #89. Best score 771 bits
Score difference with first non-orthologous sequence - L.chalumnae:771 P.ramorum:120

H3ALQ1              	100.00%		H3GR76              	100.00%
H3BH99              	57.14%		
Bootstrap support for H3ALQ1 as seed ortholog is 100%.
Bootstrap support for H3GR76 as seed ortholog is 99%.

Group of orthologs #90. Best score 767 bits
Score difference with first non-orthologous sequence - L.chalumnae:767 P.ramorum:767

H3B7T9              	100.00%		H3GGA7              	100.00%
H3AVD0              	53.63%		
Bootstrap support for H3B7T9 as seed ortholog is 100%.
Bootstrap support for H3GGA7 as seed ortholog is 100%.

Group of orthologs #91. Best score 767 bits
Score difference with first non-orthologous sequence - L.chalumnae:767 P.ramorum:767

H3AJG5              	100.00%		H3GB02              	100.00%
Bootstrap support for H3AJG5 as seed ortholog is 100%.
Bootstrap support for H3GB02 as seed ortholog is 100%.

Group of orthologs #92. Best score 761 bits
Score difference with first non-orthologous sequence - L.chalumnae:383 P.ramorum:389

H3AXC2              	100.00%		H3G5V7              	100.00%
Bootstrap support for H3AXC2 as seed ortholog is 100%.
Bootstrap support for H3G5V7 as seed ortholog is 100%.

Group of orthologs #93. Best score 758 bits
Score difference with first non-orthologous sequence - L.chalumnae:758 P.ramorum:61

H3B8B4              	100.00%		H3G6R8              	100.00%
Bootstrap support for H3B8B4 as seed ortholog is 100%.
Bootstrap support for H3G6R8 as seed ortholog is 82%.

Group of orthologs #94. Best score 756 bits
Score difference with first non-orthologous sequence - L.chalumnae:756 P.ramorum:690

H2ZV38              	100.00%		H3G9F8              	100.00%
Bootstrap support for H2ZV38 as seed ortholog is 100%.
Bootstrap support for H3G9F8 as seed ortholog is 100%.

Group of orthologs #95. Best score 748 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 P.ramorum:748

H3A6M8              	100.00%		H3GA94              	100.00%
                    	       		H3G7R9              	35.00%
Bootstrap support for H3A6M8 as seed ortholog is 100%.
Bootstrap support for H3GA94 as seed ortholog is 100%.

Group of orthologs #96. Best score 747 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.ramorum:313

H3AL07              	100.00%		H3G8C0              	100.00%
Bootstrap support for H3AL07 as seed ortholog is 100%.
Bootstrap support for H3G8C0 as seed ortholog is 100%.

Group of orthologs #97. Best score 745 bits
Score difference with first non-orthologous sequence - L.chalumnae:745 P.ramorum:745

H2ZYP0              	100.00%		H3G9K3              	100.00%
Bootstrap support for H2ZYP0 as seed ortholog is 100%.
Bootstrap support for H3G9K3 as seed ortholog is 100%.

Group of orthologs #98. Best score 745 bits
Score difference with first non-orthologous sequence - L.chalumnae:745 P.ramorum:572

H3AWE2              	100.00%		H3G9L2              	100.00%
Bootstrap support for H3AWE2 as seed ortholog is 100%.
Bootstrap support for H3G9L2 as seed ortholog is 100%.

Group of orthologs #99. Best score 743 bits
Score difference with first non-orthologous sequence - L.chalumnae:743 P.ramorum:743

H3B112              	100.00%		H3HDI3              	100.00%
H2ZSD2              	71.32%		
Bootstrap support for H3B112 as seed ortholog is 100%.
Bootstrap support for H3HDI3 as seed ortholog is 100%.

Group of orthologs #100. Best score 738 bits
Score difference with first non-orthologous sequence - L.chalumnae:738 P.ramorum:738

H3AS78              	100.00%		H3GAJ9              	100.00%
Bootstrap support for H3AS78 as seed ortholog is 100%.
Bootstrap support for H3GAJ9 as seed ortholog is 100%.

Group of orthologs #101. Best score 737 bits
Score difference with first non-orthologous sequence - L.chalumnae:414 P.ramorum:737

H3A6N8              	100.00%		H3G975              	100.00%
H3A501              	62.62%		
Bootstrap support for H3A6N8 as seed ortholog is 100%.
Bootstrap support for H3G975 as seed ortholog is 100%.

Group of orthologs #102. Best score 735 bits
Score difference with first non-orthologous sequence - L.chalumnae:735 P.ramorum:735

H3BFQ8              	100.00%		H3GA87              	100.00%
Bootstrap support for H3BFQ8 as seed ortholog is 100%.
Bootstrap support for H3GA87 as seed ortholog is 100%.

Group of orthologs #103. Best score 734 bits
Score difference with first non-orthologous sequence - L.chalumnae:734 P.ramorum:734

H3A2A4              	100.00%		H3G9H3              	100.00%
Bootstrap support for H3A2A4 as seed ortholog is 100%.
Bootstrap support for H3G9H3 as seed ortholog is 100%.

Group of orthologs #104. Best score 733 bits
Score difference with first non-orthologous sequence - L.chalumnae:733 P.ramorum:733

H3AQW1              	100.00%		H3HC97              	100.00%
Bootstrap support for H3AQW1 as seed ortholog is 100%.
Bootstrap support for H3HC97 as seed ortholog is 100%.

Group of orthologs #105. Best score 732 bits
Score difference with first non-orthologous sequence - L.chalumnae:732 P.ramorum:505

H3BCM2              	100.00%		H3GCT4              	100.00%
H3A4H8              	15.82%		
Bootstrap support for H3BCM2 as seed ortholog is 100%.
Bootstrap support for H3GCT4 as seed ortholog is 100%.

Group of orthologs #106. Best score 725 bits
Score difference with first non-orthologous sequence - L.chalumnae:606 P.ramorum:725

H3ATU0              	100.00%		H3G8A8              	100.00%
Bootstrap support for H3ATU0 as seed ortholog is 100%.
Bootstrap support for H3G8A8 as seed ortholog is 100%.

Group of orthologs #107. Best score 724 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.ramorum:69

H3A6P4              	100.00%		H3GNA3              	100.00%
H2ZWK6              	100.00%		H3GP37              	100.00%
H3B556              	50.33%		H3GXQ6              	17.03%
H3B1E3              	44.14%		H3GVQ5              	5.42%
M3XHC6              	31.16%		H3GFP8              	5.13%
Bootstrap support for H3A6P4 as seed ortholog is 98%.
Bootstrap support for H2ZWK6 as seed ortholog is 94%.
Bootstrap support for H3GNA3 as seed ortholog is 85%.
Bootstrap support for H3GP37 as seed ortholog is 65%.
Alternative seed ortholog is H3GHA0 (69 bits away from this cluster)

Group of orthologs #108. Best score 723 bits
Score difference with first non-orthologous sequence - L.chalumnae:723 P.ramorum:723

H3B1D3              	100.00%		H3G9Q2              	100.00%
Bootstrap support for H3B1D3 as seed ortholog is 100%.
Bootstrap support for H3G9Q2 as seed ortholog is 100%.

Group of orthologs #109. Best score 719 bits
Score difference with first non-orthologous sequence - L.chalumnae:719 P.ramorum:719

H3AR45              	100.00%		H3GA28              	100.00%
Bootstrap support for H3AR45 as seed ortholog is 100%.
Bootstrap support for H3GA28 as seed ortholog is 100%.

Group of orthologs #110. Best score 712 bits
Score difference with first non-orthologous sequence - L.chalumnae:712 P.ramorum:712

H3B8T1              	100.00%		H3G6U9              	100.00%
Bootstrap support for H3B8T1 as seed ortholog is 100%.
Bootstrap support for H3G6U9 as seed ortholog is 100%.

Group of orthologs #111. Best score 710 bits
Score difference with first non-orthologous sequence - L.chalumnae:710 P.ramorum:710

H3BA48              	100.00%		H3G862              	100.00%
Bootstrap support for H3BA48 as seed ortholog is 100%.
Bootstrap support for H3G862 as seed ortholog is 100%.

Group of orthologs #112. Best score 701 bits
Score difference with first non-orthologous sequence - L.chalumnae:701 P.ramorum:701

H3AYI8              	100.00%		H3GU12              	100.00%
                    	       		H3H4C0              	5.66%
Bootstrap support for H3AYI8 as seed ortholog is 100%.
Bootstrap support for H3GU12 as seed ortholog is 100%.

Group of orthologs #113. Best score 700 bits
Score difference with first non-orthologous sequence - L.chalumnae:700 P.ramorum:700

H3B8U3              	100.00%		H3G802              	100.00%
                    	       		H3GUV1              	22.50%
Bootstrap support for H3B8U3 as seed ortholog is 100%.
Bootstrap support for H3G802 as seed ortholog is 100%.

Group of orthologs #114. Best score 698 bits
Score difference with first non-orthologous sequence - L.chalumnae:698 P.ramorum:698

H3BEP4              	100.00%		H3G952              	100.00%
Bootstrap support for H3BEP4 as seed ortholog is 100%.
Bootstrap support for H3G952 as seed ortholog is 100%.

Group of orthologs #115. Best score 696 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.ramorum:448

H3ARK4              	100.00%		H3GUH6              	100.00%
Bootstrap support for H3ARK4 as seed ortholog is 99%.
Bootstrap support for H3GUH6 as seed ortholog is 100%.

Group of orthologs #116. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:626 P.ramorum:690

H3A857              	100.00%		H3G897              	100.00%
Bootstrap support for H3A857 as seed ortholog is 100%.
Bootstrap support for H3G897 as seed ortholog is 100%.

Group of orthologs #117. Best score 688 bits
Score difference with first non-orthologous sequence - L.chalumnae:645 P.ramorum:688

H3BHY3              	100.00%		H3G985              	100.00%
Bootstrap support for H3BHY3 as seed ortholog is 100%.
Bootstrap support for H3G985 as seed ortholog is 100%.

Group of orthologs #118. Best score 687 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:614

H3B696              	100.00%		H3G8M4              	100.00%
H3A0X9              	46.21%		H3G8L8              	99.03%
H3B6F8              	31.82%		
Bootstrap support for H3B696 as seed ortholog is 99%.
Bootstrap support for H3G8M4 as seed ortholog is 100%.

Group of orthologs #119. Best score 686 bits
Score difference with first non-orthologous sequence - L.chalumnae:686 P.ramorum:491

H3ASQ5              	100.00%		H3G582              	100.00%
                    	       		H3H2J9              	34.02%
                    	       		H3G579              	17.22%
Bootstrap support for H3ASQ5 as seed ortholog is 100%.
Bootstrap support for H3G582 as seed ortholog is 100%.

Group of orthologs #120. Best score 686 bits
Score difference with first non-orthologous sequence - L.chalumnae:686 P.ramorum:686

H3B705              	100.00%		H3G891              	100.00%
Bootstrap support for H3B705 as seed ortholog is 100%.
Bootstrap support for H3G891 as seed ortholog is 100%.

Group of orthologs #121. Best score 686 bits
Score difference with first non-orthologous sequence - L.chalumnae:686 P.ramorum:686

H3AVJ6              	100.00%		H3GQF9              	100.00%
Bootstrap support for H3AVJ6 as seed ortholog is 100%.
Bootstrap support for H3GQF9 as seed ortholog is 100%.

Group of orthologs #122. Best score 684 bits
Score difference with first non-orthologous sequence - L.chalumnae:684 P.ramorum:684

H3B4J0              	100.00%		H3G982              	100.00%
Bootstrap support for H3B4J0 as seed ortholog is 100%.
Bootstrap support for H3G982 as seed ortholog is 100%.

Group of orthologs #123. Best score 681 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:415

H3BBJ9              	100.00%		H3G9B9              	100.00%
H2ZUX4              	68.75%		H3G9B8              	18.52%
H3A754              	58.75%		
H3AUT1              	51.25%		
H3AVL6              	50.00%		
H3A626              	46.25%		
H3A440              	41.25%		
Bootstrap support for H3BBJ9 as seed ortholog is 99%.
Bootstrap support for H3G9B9 as seed ortholog is 100%.

Group of orthologs #124. Best score 679 bits
Score difference with first non-orthologous sequence - L.chalumnae:679 P.ramorum:679

H3AY53              	100.00%		H3GAX7              	100.00%
Bootstrap support for H3AY53 as seed ortholog is 100%.
Bootstrap support for H3GAX7 as seed ortholog is 100%.

Group of orthologs #125. Best score 678 bits
Score difference with first non-orthologous sequence - L.chalumnae:678 P.ramorum:678

H3A861              	100.00%		H3GCK5              	100.00%
Bootstrap support for H3A861 as seed ortholog is 100%.
Bootstrap support for H3GCK5 as seed ortholog is 100%.

Group of orthologs #126. Best score 674 bits
Score difference with first non-orthologous sequence - L.chalumnae:674 P.ramorum:626

H3B8Y9              	100.00%		H3G9Z1              	100.00%
H3B7N0              	49.48%		
Bootstrap support for H3B8Y9 as seed ortholog is 100%.
Bootstrap support for H3G9Z1 as seed ortholog is 100%.

Group of orthologs #127. Best score 674 bits
Score difference with first non-orthologous sequence - L.chalumnae:674 P.ramorum:674

H3B5F1              	100.00%		H3G7B9              	100.00%
Bootstrap support for H3B5F1 as seed ortholog is 100%.
Bootstrap support for H3G7B9 as seed ortholog is 100%.

Group of orthologs #128. Best score 673 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.ramorum:310

H3A7G0              	100.00%		H3GLF9              	100.00%
H3A9W0              	41.75%		
Bootstrap support for H3A7G0 as seed ortholog is 100%.
Bootstrap support for H3GLF9 as seed ortholog is 100%.

Group of orthologs #129. Best score 673 bits
Score difference with first non-orthologous sequence - L.chalumnae:673 P.ramorum:673

H3A579              	100.00%		H3GEH1              	100.00%
Bootstrap support for H3A579 as seed ortholog is 100%.
Bootstrap support for H3GEH1 as seed ortholog is 100%.

Group of orthologs #130. Best score 673 bits
Score difference with first non-orthologous sequence - L.chalumnae:673 P.ramorum:673

H3AB34              	100.00%		H3GD86              	100.00%
Bootstrap support for H3AB34 as seed ortholog is 100%.
Bootstrap support for H3GD86 as seed ortholog is 100%.

Group of orthologs #131. Best score 671 bits
Score difference with first non-orthologous sequence - L.chalumnae:671 P.ramorum:134

H3BA02              	100.00%		H3G4X7              	100.00%
Bootstrap support for H3BA02 as seed ortholog is 100%.
Bootstrap support for H3G4X7 as seed ortholog is 98%.

Group of orthologs #132. Best score 670 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.ramorum:173

H3AAN7              	100.00%		H3GHD9              	100.00%
H3AP83              	47.72%		
H2ZSM1              	25.19%		
Bootstrap support for H3AAN7 as seed ortholog is 98%.
Bootstrap support for H3GHD9 as seed ortholog is 99%.

Group of orthologs #133. Best score 669 bits
Score difference with first non-orthologous sequence - L.chalumnae:669 P.ramorum:669

H3A6J3              	100.00%		H3G8P1              	100.00%
H3A2M7              	40.44%		
Bootstrap support for H3A6J3 as seed ortholog is 100%.
Bootstrap support for H3G8P1 as seed ortholog is 100%.

Group of orthologs #134. Best score 666 bits
Score difference with first non-orthologous sequence - L.chalumnae:456 P.ramorum:469

H2ZRV2              	100.00%		H3GA17              	100.00%
Bootstrap support for H2ZRV2 as seed ortholog is 100%.
Bootstrap support for H3GA17 as seed ortholog is 100%.

Group of orthologs #135. Best score 666 bits
Score difference with first non-orthologous sequence - L.chalumnae:666 P.ramorum:666

H3AIZ6              	100.00%		H3G5R3              	100.00%
Bootstrap support for H3AIZ6 as seed ortholog is 100%.
Bootstrap support for H3G5R3 as seed ortholog is 100%.

Group of orthologs #136. Best score 663 bits
Score difference with first non-orthologous sequence - L.chalumnae:663 P.ramorum:663

H3AAU5              	100.00%		H3G9Z0              	100.00%
Bootstrap support for H3AAU5 as seed ortholog is 100%.
Bootstrap support for H3G9Z0 as seed ortholog is 100%.

Group of orthologs #137. Best score 661 bits
Score difference with first non-orthologous sequence - L.chalumnae:661 P.ramorum:163

H3ACZ9              	100.00%		H3G8G8              	100.00%
H3B9Q4              	28.14%		
Bootstrap support for H3ACZ9 as seed ortholog is 100%.
Bootstrap support for H3G8G8 as seed ortholog is 99%.

Group of orthologs #138. Best score 660 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:660

H2ZZD1              	100.00%		H3HCY4              	100.00%
H3A9E4              	33.17%		
H3ART7              	32.25%		
H3ATD8              	27.98%		
Bootstrap support for H2ZZD1 as seed ortholog is 99%.
Bootstrap support for H3HCY4 as seed ortholog is 100%.

Group of orthologs #139. Best score 660 bits
Score difference with first non-orthologous sequence - L.chalumnae:660 P.ramorum:660

H3B4J9              	100.00%		H3GAU9              	100.00%
Bootstrap support for H3B4J9 as seed ortholog is 100%.
Bootstrap support for H3GAU9 as seed ortholog is 100%.

Group of orthologs #140. Best score 659 bits
Score difference with first non-orthologous sequence - L.chalumnae:659 P.ramorum:659

H2ZXA7              	100.00%		H3G8J5              	100.00%
Bootstrap support for H2ZXA7 as seed ortholog is 100%.
Bootstrap support for H3G8J5 as seed ortholog is 100%.

Group of orthologs #141. Best score 659 bits
Score difference with first non-orthologous sequence - L.chalumnae:659 P.ramorum:367

H3B286              	100.00%		H3G8K6              	100.00%
Bootstrap support for H3B286 as seed ortholog is 100%.
Bootstrap support for H3G8K6 as seed ortholog is 100%.

Group of orthologs #142. Best score 658 bits
Score difference with first non-orthologous sequence - L.chalumnae:658 P.ramorum:658

H2ZSS1              	100.00%		H3G5U5              	100.00%
Bootstrap support for H2ZSS1 as seed ortholog is 100%.
Bootstrap support for H3G5U5 as seed ortholog is 100%.

Group of orthologs #143. Best score 657 bits
Score difference with first non-orthologous sequence - L.chalumnae:657 P.ramorum:387

H2ZZK0              	100.00%		H3GLH3              	100.00%
Bootstrap support for H2ZZK0 as seed ortholog is 100%.
Bootstrap support for H3GLH3 as seed ortholog is 100%.

Group of orthologs #144. Best score 653 bits
Score difference with first non-orthologous sequence - L.chalumnae:653 P.ramorum:653

H3A8N1              	100.00%		H3G5T3              	100.00%
Bootstrap support for H3A8N1 as seed ortholog is 100%.
Bootstrap support for H3G5T3 as seed ortholog is 100%.

Group of orthologs #145. Best score 653 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:653

H3AND9              	100.00%		H3GAE1              	100.00%
Bootstrap support for H3AND9 as seed ortholog is 95%.
Bootstrap support for H3GAE1 as seed ortholog is 100%.

Group of orthologs #146. Best score 653 bits
Score difference with first non-orthologous sequence - L.chalumnae:382 P.ramorum:505

H3AXM1              	100.00%		H3GV59              	100.00%
Bootstrap support for H3AXM1 as seed ortholog is 100%.
Bootstrap support for H3GV59 as seed ortholog is 100%.

Group of orthologs #147. Best score 650 bits
Score difference with first non-orthologous sequence - L.chalumnae:410 P.ramorum:386

H3AYD3              	100.00%		H3GH04              	100.00%
Bootstrap support for H3AYD3 as seed ortholog is 100%.
Bootstrap support for H3GH04 as seed ortholog is 100%.

Group of orthologs #148. Best score 649 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:573

H3AW63              	100.00%		H3GAK3              	100.00%
H3BGN7              	14.16%		H3GB63              	84.30%
                    	       		H3GAK4              	83.26%
                    	       		H3H1K9              	74.22%
Bootstrap support for H3AW63 as seed ortholog is 65%.
Alternative seed ortholog is H3BGI7 (12 bits away from this cluster)
Bootstrap support for H3GAK3 as seed ortholog is 100%.

Group of orthologs #149. Best score 649 bits
Score difference with first non-orthologous sequence - L.chalumnae:649 P.ramorum:649

H3APY1              	100.00%		H3G7T2              	100.00%
Bootstrap support for H3APY1 as seed ortholog is 100%.
Bootstrap support for H3G7T2 as seed ortholog is 100%.

Group of orthologs #150. Best score 646 bits
Score difference with first non-orthologous sequence - L.chalumnae:646 P.ramorum:646

H3BB48              	100.00%		H3GAT6              	100.00%
H3A405              	17.30%		
Bootstrap support for H3BB48 as seed ortholog is 100%.
Bootstrap support for H3GAT6 as seed ortholog is 100%.

Group of orthologs #151. Best score 646 bits
Score difference with first non-orthologous sequence - L.chalumnae:646 P.ramorum:646

H2ZW51              	100.00%		H3G9G8              	100.00%
Bootstrap support for H2ZW51 as seed ortholog is 100%.
Bootstrap support for H3G9G8 as seed ortholog is 100%.

Group of orthologs #152. Best score 645 bits
Score difference with first non-orthologous sequence - L.chalumnae:358 P.ramorum:645

H3AHA1              	100.00%		H3G7N9              	100.00%
Bootstrap support for H3AHA1 as seed ortholog is 100%.
Bootstrap support for H3G7N9 as seed ortholog is 100%.

Group of orthologs #153. Best score 640 bits
Score difference with first non-orthologous sequence - L.chalumnae:640 P.ramorum:640

H3AGW8              	100.00%		H3G9E1              	100.00%
                    	       		H3G9J5              	46.14%
                    	       		H3G6P1              	21.78%
Bootstrap support for H3AGW8 as seed ortholog is 100%.
Bootstrap support for H3G9E1 as seed ortholog is 100%.

Group of orthologs #154. Best score 637 bits
Score difference with first non-orthologous sequence - L.chalumnae:578 P.ramorum:637

H3AM02              	100.00%		H3GB16              	100.00%
Bootstrap support for H3AM02 as seed ortholog is 100%.
Bootstrap support for H3GB16 as seed ortholog is 100%.

Group of orthologs #155. Best score 631 bits
Score difference with first non-orthologous sequence - L.chalumnae:631 P.ramorum:631

H2ZTV8              	100.00%		H3HC99              	100.00%
Bootstrap support for H2ZTV8 as seed ortholog is 100%.
Bootstrap support for H3HC99 as seed ortholog is 100%.

Group of orthologs #156. Best score 631 bits
Score difference with first non-orthologous sequence - L.chalumnae:631 P.ramorum:631

H3B8A6              	100.00%		H3GVH6              	100.00%
Bootstrap support for H3B8A6 as seed ortholog is 100%.
Bootstrap support for H3GVH6 as seed ortholog is 100%.

Group of orthologs #157. Best score 630 bits
Score difference with first non-orthologous sequence - L.chalumnae:567 P.ramorum:630

H3BFD1              	100.00%		H3GA85              	100.00%
Bootstrap support for H3BFD1 as seed ortholog is 100%.
Bootstrap support for H3GA85 as seed ortholog is 100%.

Group of orthologs #158. Best score 629 bits
Score difference with first non-orthologous sequence - L.chalumnae:629 P.ramorum:629

H3AD90              	100.00%		H3GAA1              	100.00%
Bootstrap support for H3AD90 as seed ortholog is 100%.
Bootstrap support for H3GAA1 as seed ortholog is 100%.

Group of orthologs #159. Best score 629 bits
Score difference with first non-orthologous sequence - L.chalumnae:551 P.ramorum:577

H3AT05              	100.00%		H3G9L6              	100.00%
Bootstrap support for H3AT05 as seed ortholog is 100%.
Bootstrap support for H3G9L6 as seed ortholog is 100%.

Group of orthologs #160. Best score 629 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 P.ramorum:629

H3AS84              	100.00%		H3GAE7              	100.00%
Bootstrap support for H3AS84 as seed ortholog is 100%.
Bootstrap support for H3GAE7 as seed ortholog is 100%.

Group of orthologs #161. Best score 628 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:341

H3A5T0              	100.00%		H3GCX9              	100.00%
Bootstrap support for H3A5T0 as seed ortholog is 99%.
Bootstrap support for H3GCX9 as seed ortholog is 100%.

Group of orthologs #162. Best score 628 bits
Score difference with first non-orthologous sequence - L.chalumnae:432 P.ramorum:208

H3B659              	100.00%		H3G649              	100.00%
Bootstrap support for H3B659 as seed ortholog is 100%.
Bootstrap support for H3G649 as seed ortholog is 100%.

Group of orthologs #163. Best score 626 bits
Score difference with first non-orthologous sequence - L.chalumnae:626 P.ramorum:626

H3B133              	100.00%		H3G5N2              	100.00%
Bootstrap support for H3B133 as seed ortholog is 100%.
Bootstrap support for H3G5N2 as seed ortholog is 100%.

Group of orthologs #164. Best score 625 bits
Score difference with first non-orthologous sequence - L.chalumnae:625 P.ramorum:625

H3A5F9              	100.00%		H3G9F4              	100.00%
Bootstrap support for H3A5F9 as seed ortholog is 100%.
Bootstrap support for H3G9F4 as seed ortholog is 100%.

Group of orthologs #165. Best score 625 bits
Score difference with first non-orthologous sequence - L.chalumnae:625 P.ramorum:625

H3B172              	100.00%		H3GGH5              	100.00%
Bootstrap support for H3B172 as seed ortholog is 100%.
Bootstrap support for H3GGH5 as seed ortholog is 100%.

Group of orthologs #166. Best score 621 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 P.ramorum:511

H3AIE9              	100.00%		H3G835              	100.00%
Bootstrap support for H3AIE9 as seed ortholog is 100%.
Bootstrap support for H3G835 as seed ortholog is 100%.

Group of orthologs #167. Best score 620 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.ramorum:620

H3AXE7              	100.00%		H3G9T1              	100.00%
Bootstrap support for H3AXE7 as seed ortholog is 100%.
Bootstrap support for H3G9T1 as seed ortholog is 100%.

Group of orthologs #168. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:441 P.ramorum:455

H3B5C3              	100.00%		H3G9Z6              	100.00%
H2ZY90              	37.89%		
Bootstrap support for H3B5C3 as seed ortholog is 100%.
Bootstrap support for H3G9Z6 as seed ortholog is 100%.

Group of orthologs #169. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:619 P.ramorum:619

H3ALM5              	100.00%		H3G6I6              	100.00%
Bootstrap support for H3ALM5 as seed ortholog is 100%.
Bootstrap support for H3G6I6 as seed ortholog is 100%.

Group of orthologs #170. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:619 P.ramorum:619

H3B1E7              	100.00%		H3G5V5              	100.00%
Bootstrap support for H3B1E7 as seed ortholog is 100%.
Bootstrap support for H3G5V5 as seed ortholog is 100%.

Group of orthologs #171. Best score 618 bits
Score difference with first non-orthologous sequence - L.chalumnae:618 P.ramorum:618

H3AVK7              	100.00%		H3GP75              	100.00%
Bootstrap support for H3AVK7 as seed ortholog is 100%.
Bootstrap support for H3GP75 as seed ortholog is 100%.

Group of orthologs #172. Best score 614 bits
Score difference with first non-orthologous sequence - L.chalumnae:614 P.ramorum:614

H3AZF1              	100.00%		H3G6T5              	100.00%
H3AKS0              	32.46%		
Bootstrap support for H3AZF1 as seed ortholog is 100%.
Bootstrap support for H3G6T5 as seed ortholog is 100%.

Group of orthologs #173. Best score 614 bits
Score difference with first non-orthologous sequence - L.chalumnae:387 P.ramorum:614

H3AB98              	100.00%		H3G5M4              	100.00%
Bootstrap support for H3AB98 as seed ortholog is 100%.
Bootstrap support for H3G5M4 as seed ortholog is 100%.

Group of orthologs #174. Best score 614 bits
Score difference with first non-orthologous sequence - L.chalumnae:614 P.ramorum:614

H3B2R7              	100.00%		H3H2A5              	100.00%
Bootstrap support for H3B2R7 as seed ortholog is 100%.
Bootstrap support for H3H2A5 as seed ortholog is 100%.

Group of orthologs #175. Best score 613 bits
Score difference with first non-orthologous sequence - L.chalumnae:613 P.ramorum:613

H3BFE7              	100.00%		H3G5D6              	100.00%
Bootstrap support for H3BFE7 as seed ortholog is 100%.
Bootstrap support for H3G5D6 as seed ortholog is 100%.

Group of orthologs #176. Best score 612 bits
Score difference with first non-orthologous sequence - L.chalumnae:612 P.ramorum:612

H3BAN6              	100.00%		H3G9A5              	100.00%
H3AXW8              	13.33%		
Bootstrap support for H3BAN6 as seed ortholog is 100%.
Bootstrap support for H3G9A5 as seed ortholog is 100%.

Group of orthologs #177. Best score 612 bits
Score difference with first non-orthologous sequence - L.chalumnae:612 P.ramorum:612

H3B206              	100.00%		H3G970              	100.00%
Bootstrap support for H3B206 as seed ortholog is 100%.
Bootstrap support for H3G970 as seed ortholog is 100%.

Group of orthologs #178. Best score 611 bits
Score difference with first non-orthologous sequence - L.chalumnae:611 P.ramorum:611

H3A0A9              	100.00%		H3H6L0              	100.00%
H3BFK3              	15.95%		H3G744              	37.51%
Bootstrap support for H3A0A9 as seed ortholog is 100%.
Bootstrap support for H3H6L0 as seed ortholog is 100%.

Group of orthologs #179. Best score 611 bits
Score difference with first non-orthologous sequence - L.chalumnae:611 P.ramorum:333

H3ADM5              	100.00%		H3G5J3              	100.00%
Bootstrap support for H3ADM5 as seed ortholog is 100%.
Bootstrap support for H3G5J3 as seed ortholog is 100%.

Group of orthologs #180. Best score 611 bits
Score difference with first non-orthologous sequence - L.chalumnae:413 P.ramorum:301

H3BGD6              	100.00%		H3G873              	100.00%
Bootstrap support for H3BGD6 as seed ortholog is 100%.
Bootstrap support for H3G873 as seed ortholog is 100%.

Group of orthologs #181. Best score 608 bits
Score difference with first non-orthologous sequence - L.chalumnae:608 P.ramorum:608

H3AAK0              	100.00%		H3G6X3              	100.00%
                    	       		H3GAH5              	97.09%
Bootstrap support for H3AAK0 as seed ortholog is 100%.
Bootstrap support for H3G6X3 as seed ortholog is 100%.

Group of orthologs #182. Best score 607 bits
Score difference with first non-orthologous sequence - L.chalumnae:474 P.ramorum:607

H3A922              	100.00%		H3H4A7              	100.00%
Bootstrap support for H3A922 as seed ortholog is 100%.
Bootstrap support for H3H4A7 as seed ortholog is 100%.

Group of orthologs #183. Best score 606 bits
Score difference with first non-orthologous sequence - L.chalumnae:447 P.ramorum:498

H3AA40              	100.00%		H3GA86              	100.00%
Bootstrap support for H3AA40 as seed ortholog is 100%.
Bootstrap support for H3GA86 as seed ortholog is 100%.

Group of orthologs #184. Best score 606 bits
Score difference with first non-orthologous sequence - L.chalumnae:606 P.ramorum:606

H3B646              	100.00%		H3G9C4              	100.00%
Bootstrap support for H3B646 as seed ortholog is 100%.
Bootstrap support for H3G9C4 as seed ortholog is 100%.

Group of orthologs #185. Best score 606 bits
Score difference with first non-orthologous sequence - L.chalumnae:606 P.ramorum:606

H3AWV3              	100.00%		H3GVT4              	100.00%
Bootstrap support for H3AWV3 as seed ortholog is 100%.
Bootstrap support for H3GVT4 as seed ortholog is 100%.

Group of orthologs #186. Best score 605 bits
Score difference with first non-orthologous sequence - L.chalumnae:605 P.ramorum:357

H3A9D1              	100.00%		H3GA43              	100.00%
Bootstrap support for H3A9D1 as seed ortholog is 100%.
Bootstrap support for H3GA43 as seed ortholog is 100%.

Group of orthologs #187. Best score 602 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.ramorum:402

H3BEF1              	100.00%		H3G926              	100.00%
H3A6E9              	54.07%		
H3A1W8              	47.85%		
Bootstrap support for H3BEF1 as seed ortholog is 100%.
Bootstrap support for H3G926 as seed ortholog is 100%.

Group of orthologs #188. Best score 602 bits
Score difference with first non-orthologous sequence - L.chalumnae:602 P.ramorum:602

H3A2K4              	100.00%		H3G841              	100.00%
H3B416              	14.71%		
Bootstrap support for H3A2K4 as seed ortholog is 100%.
Bootstrap support for H3G841 as seed ortholog is 100%.

Group of orthologs #189. Best score 602 bits
Score difference with first non-orthologous sequence - L.chalumnae:510 P.ramorum:359

H3A7X9              	100.00%		H3G566              	100.00%
Bootstrap support for H3A7X9 as seed ortholog is 100%.
Bootstrap support for H3G566 as seed ortholog is 100%.

Group of orthologs #190. Best score 601 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.ramorum:176

H3A8H4              	100.00%		H3H2D8              	100.00%
H3A979              	44.70%		H3GWW2              	7.21%
H3B961              	33.93%		
Bootstrap support for H3A8H4 as seed ortholog is 77%.
Bootstrap support for H3H2D8 as seed ortholog is 99%.

Group of orthologs #191. Best score 601 bits
Score difference with first non-orthologous sequence - L.chalumnae:601 P.ramorum:329

H3BIM2              	100.00%		H3HAM1              	100.00%
Bootstrap support for H3BIM2 as seed ortholog is 100%.
Bootstrap support for H3HAM1 as seed ortholog is 100%.

Group of orthologs #192. Best score 600 bits
Score difference with first non-orthologous sequence - L.chalumnae:406 P.ramorum:368

H3BHP5              	100.00%		H3G6I7              	100.00%
Bootstrap support for H3BHP5 as seed ortholog is 100%.
Bootstrap support for H3G6I7 as seed ortholog is 100%.

Group of orthologs #193. Best score 599 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:90

H3A3V2              	100.00%		H3GZK5              	100.00%
H3A878              	13.97%		H3G5B5              	12.49%
Bootstrap support for H3A3V2 as seed ortholog is 96%.
Bootstrap support for H3GZK5 as seed ortholog is 95%.

Group of orthologs #194. Best score 599 bits
Score difference with first non-orthologous sequence - L.chalumnae:599 P.ramorum:599

H2ZZN4              	100.00%		H3G852              	100.00%
Bootstrap support for H2ZZN4 as seed ortholog is 100%.
Bootstrap support for H3G852 as seed ortholog is 100%.

Group of orthologs #195. Best score 598 bits
Score difference with first non-orthologous sequence - L.chalumnae:598 P.ramorum:598

H3B5D7              	100.00%		H3HC02              	100.00%
H3A988              	37.86%		
Bootstrap support for H3B5D7 as seed ortholog is 100%.
Bootstrap support for H3HC02 as seed ortholog is 100%.

Group of orthologs #196. Best score 597 bits
Score difference with first non-orthologous sequence - L.chalumnae:597 P.ramorum:597

H2ZWM2              	100.00%		H3GTR2              	100.00%
Bootstrap support for H2ZWM2 as seed ortholog is 100%.
Bootstrap support for H3GTR2 as seed ortholog is 100%.

Group of orthologs #197. Best score 593 bits
Score difference with first non-orthologous sequence - L.chalumnae:593 P.ramorum:593

H3B0E9              	100.00%		H3GFZ4              	100.00%
Bootstrap support for H3B0E9 as seed ortholog is 100%.
Bootstrap support for H3GFZ4 as seed ortholog is 100%.

Group of orthologs #198. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:592 P.ramorum:592

H3B2Y2              	100.00%		H3G978              	100.00%
Bootstrap support for H3B2Y2 as seed ortholog is 100%.
Bootstrap support for H3G978 as seed ortholog is 100%.

Group of orthologs #199. Best score 591 bits
Score difference with first non-orthologous sequence - L.chalumnae:591 P.ramorum:591

H3ABZ1              	100.00%		H3GG34              	100.00%
Bootstrap support for H3ABZ1 as seed ortholog is 100%.
Bootstrap support for H3GG34 as seed ortholog is 100%.

Group of orthologs #200. Best score 591 bits
Score difference with first non-orthologous sequence - L.chalumnae:591 P.ramorum:591

H3A1U0              	100.00%		H3H1S7              	100.00%
Bootstrap support for H3A1U0 as seed ortholog is 100%.
Bootstrap support for H3H1S7 as seed ortholog is 100%.

Group of orthologs #201. Best score 590 bits
Score difference with first non-orthologous sequence - L.chalumnae:590 P.ramorum:368

H3ADZ0              	100.00%		H3GAI2              	100.00%
                    	       		H3G9B2              	8.80%
Bootstrap support for H3ADZ0 as seed ortholog is 100%.
Bootstrap support for H3GAI2 as seed ortholog is 100%.

Group of orthologs #202. Best score 587 bits
Score difference with first non-orthologous sequence - L.chalumnae:587 P.ramorum:185

H3A9P8              	100.00%		H3G910              	100.00%
H3AWQ6              	9.81%		H3GCI6              	58.73%
Bootstrap support for H3A9P8 as seed ortholog is 100%.
Bootstrap support for H3G910 as seed ortholog is 99%.

Group of orthologs #203. Best score 586 bits
Score difference with first non-orthologous sequence - L.chalumnae:586 P.ramorum:586

H3A672              	100.00%		H3G6K6              	100.00%
Bootstrap support for H3A672 as seed ortholog is 100%.
Bootstrap support for H3G6K6 as seed ortholog is 100%.

Group of orthologs #204. Best score 584 bits
Score difference with first non-orthologous sequence - L.chalumnae:425 P.ramorum:393

H3B9X9              	100.00%		H3GDM7              	100.00%
H3BAP0              	41.62%		
Bootstrap support for H3B9X9 as seed ortholog is 100%.
Bootstrap support for H3GDM7 as seed ortholog is 100%.

Group of orthologs #205. Best score 583 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.ramorum:150

H3AMP2              	100.00%		H3GAS5              	100.00%
H3AR00              	94.00%		
H3B6N4              	7.00%		
Bootstrap support for H3AMP2 as seed ortholog is 96%.
Bootstrap support for H3GAS5 as seed ortholog is 100%.

Group of orthologs #206. Best score 583 bits
Score difference with first non-orthologous sequence - L.chalumnae:475 P.ramorum:497

H3ACG3              	100.00%		H3GM71              	100.00%
H3B2X6              	43.73%		
Bootstrap support for H3ACG3 as seed ortholog is 100%.
Bootstrap support for H3GM71 as seed ortholog is 100%.

Group of orthologs #207. Best score 583 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.ramorum:583

H3AKB8              	100.00%		H3G7Y5              	100.00%
Bootstrap support for H3AKB8 as seed ortholog is 100%.
Bootstrap support for H3G7Y5 as seed ortholog is 100%.

Group of orthologs #208. Best score 583 bits
Score difference with first non-orthologous sequence - L.chalumnae:583 P.ramorum:583

H3AIE7              	100.00%		H3GSI3              	100.00%
Bootstrap support for H3AIE7 as seed ortholog is 100%.
Bootstrap support for H3GSI3 as seed ortholog is 100%.

Group of orthologs #209. Best score 583 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.ramorum:583

H3BD04              	100.00%		H3G8W1              	100.00%
Bootstrap support for H3BD04 as seed ortholog is 99%.
Bootstrap support for H3G8W1 as seed ortholog is 100%.

Group of orthologs #210. Best score 579 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:482

H3BE26              	100.00%		H3GTN8              	100.00%
                    	       		H3GS01              	32.86%
Bootstrap support for H3BE26 as seed ortholog is 99%.
Bootstrap support for H3GTN8 as seed ortholog is 100%.

Group of orthologs #211. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:577 P.ramorum:52

H3B4A5              	100.00%		H3GVL3              	100.00%
H3ASV2              	62.03%		
Bootstrap support for H3B4A5 as seed ortholog is 100%.
Bootstrap support for H3GVL3 as seed ortholog is 79%.

Group of orthologs #212. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:577 P.ramorum:211

H3APN1              	100.00%		H3G8C9              	100.00%
Bootstrap support for H3APN1 as seed ortholog is 100%.
Bootstrap support for H3G8C9 as seed ortholog is 99%.

Group of orthologs #213. Best score 576 bits
Score difference with first non-orthologous sequence - L.chalumnae:483 P.ramorum:576

H3AV53              	100.00%		H3GAU6              	100.00%
H3A5M3              	59.16%		
H3AA31              	39.54%		
Bootstrap support for H3AV53 as seed ortholog is 100%.
Bootstrap support for H3GAU6 as seed ortholog is 100%.

Group of orthologs #214. Best score 576 bits
Score difference with first non-orthologous sequence - L.chalumnae:576 P.ramorum:576

H2ZUS7              	100.00%		H3HD79              	100.00%
H3AQY8              	44.69%		
Bootstrap support for H2ZUS7 as seed ortholog is 100%.
Bootstrap support for H3HD79 as seed ortholog is 100%.

Group of orthologs #215. Best score 576 bits
Score difference with first non-orthologous sequence - L.chalumnae:576 P.ramorum:576

H3AQ45              	100.00%		H3GYM4              	100.00%
Bootstrap support for H3AQ45 as seed ortholog is 100%.
Bootstrap support for H3GYM4 as seed ortholog is 100%.

Group of orthologs #216. Best score 575 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.ramorum:9

H3B3T4              	100.00%		H3GA90              	100.00%
Bootstrap support for H3B3T4 as seed ortholog is 85%.
Bootstrap support for H3GA90 as seed ortholog is 56%.
Alternative seed ortholog is H3G9I7 (9 bits away from this cluster)

Group of orthologs #217. Best score 575 bits
Score difference with first non-orthologous sequence - L.chalumnae:575 P.ramorum:575

H3BDT5              	100.00%		H3GW62              	100.00%
Bootstrap support for H3BDT5 as seed ortholog is 100%.
Bootstrap support for H3GW62 as seed ortholog is 100%.

Group of orthologs #218. Best score 574 bits
Score difference with first non-orthologous sequence - L.chalumnae:574 P.ramorum:574

H3A5T3              	100.00%		H3HCV8              	100.00%
Bootstrap support for H3A5T3 as seed ortholog is 100%.
Bootstrap support for H3HCV8 as seed ortholog is 100%.

Group of orthologs #219. Best score 573 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:80

H3BII8              	100.00%		H3G967              	100.00%
Bootstrap support for H3BII8 as seed ortholog is 99%.
Bootstrap support for H3G967 as seed ortholog is 98%.

Group of orthologs #220. Best score 572 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:201

H3ATS6              	100.00%		H3G8I6              	100.00%
M3XGL4              	100.00%		H3G5S9              	100.00%
H3BEP7              	32.43%		H3G8I3              	68.38%
H3AUS8              	23.83%		H3G8I2              	57.84%
                    	       		H3H3Z3              	45.00%
Bootstrap support for H3ATS6 as seed ortholog is 99%.
Bootstrap support for M3XGL4 as seed ortholog is 99%.
Bootstrap support for H3G8I6 as seed ortholog is 100%.
Bootstrap support for H3G5S9 as seed ortholog is 100%.

Group of orthologs #221. Best score 572 bits
Score difference with first non-orthologous sequence - L.chalumnae:572 P.ramorum:572

H3ASL2              	100.00%		H3G8K5              	100.00%
Bootstrap support for H3ASL2 as seed ortholog is 100%.
Bootstrap support for H3G8K5 as seed ortholog is 100%.

Group of orthologs #222. Best score 572 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.ramorum:572

H3B2F0              	100.00%		H3G8C6              	100.00%
Bootstrap support for H3B2F0 as seed ortholog is 100%.
Bootstrap support for H3G8C6 as seed ortholog is 100%.

Group of orthologs #223. Best score 571 bits
Score difference with first non-orthologous sequence - L.chalumnae:492 P.ramorum:571

H3AYF4              	100.00%		H3G6T4              	100.00%
H3AWK9              	30.89%		H3GQ77              	22.90%
H3B8M1              	16.51%		
Bootstrap support for H3AYF4 as seed ortholog is 100%.
Bootstrap support for H3G6T4 as seed ortholog is 100%.

Group of orthologs #224. Best score 571 bits
Score difference with first non-orthologous sequence - L.chalumnae:571 P.ramorum:571

H3AGD0              	100.00%		H3G5E1              	100.00%
Bootstrap support for H3AGD0 as seed ortholog is 100%.
Bootstrap support for H3G5E1 as seed ortholog is 100%.

Group of orthologs #225. Best score 571 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:571

H3AED7              	100.00%		H3G842              	100.00%
Bootstrap support for H3AED7 as seed ortholog is 100%.
Bootstrap support for H3G842 as seed ortholog is 100%.

Group of orthologs #226. Best score 571 bits
Score difference with first non-orthologous sequence - L.chalumnae:571 P.ramorum:571

H3AGC7              	100.00%		H3GAS2              	100.00%
Bootstrap support for H3AGC7 as seed ortholog is 100%.
Bootstrap support for H3GAS2 as seed ortholog is 100%.

Group of orthologs #227. Best score 570 bits
Score difference with first non-orthologous sequence - L.chalumnae:570 P.ramorum:570

H3AXJ1              	100.00%		H3GCH9              	100.00%
Bootstrap support for H3AXJ1 as seed ortholog is 100%.
Bootstrap support for H3GCH9 as seed ortholog is 100%.

Group of orthologs #228. Best score 568 bits
Score difference with first non-orthologous sequence - L.chalumnae:568 P.ramorum:568

H3A776              	100.00%		H3GAM7              	100.00%
Bootstrap support for H3A776 as seed ortholog is 100%.
Bootstrap support for H3GAM7 as seed ortholog is 100%.

Group of orthologs #229. Best score 568 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:354

H3B1B6              	100.00%		H3GTT0              	100.00%
Bootstrap support for H3B1B6 as seed ortholog is 100%.
Bootstrap support for H3GTT0 as seed ortholog is 100%.

Group of orthologs #230. Best score 567 bits
Score difference with first non-orthologous sequence - L.chalumnae:468 P.ramorum:8

H3B7K3              	100.00%		H3GAG9              	100.00%
H3B528              	60.07%		
H2ZXR3              	23.43%		
Bootstrap support for H3B7K3 as seed ortholog is 100%.
Bootstrap support for H3GAG9 as seed ortholog is 41%.
Alternative seed ortholog is H3GAT5 (8 bits away from this cluster)

Group of orthologs #231. Best score 567 bits
Score difference with first non-orthologous sequence - L.chalumnae:567 P.ramorum:567

H3BI07              	100.00%		H3G5B1              	100.00%
Bootstrap support for H3BI07 as seed ortholog is 100%.
Bootstrap support for H3G5B1 as seed ortholog is 100%.

Group of orthologs #232. Best score 566 bits
Score difference with first non-orthologous sequence - L.chalumnae:414 P.ramorum:143

H3BBC7              	100.00%		H3HCL6              	100.00%
H3BBR6              	67.31%		
H2ZVK6              	61.05%		
Bootstrap support for H3BBC7 as seed ortholog is 100%.
Bootstrap support for H3HCL6 as seed ortholog is 98%.

Group of orthologs #233. Best score 566 bits
Score difference with first non-orthologous sequence - L.chalumnae:488 P.ramorum:566

H3AHL0              	100.00%		H3G7L1              	100.00%
Bootstrap support for H3AHL0 as seed ortholog is 100%.
Bootstrap support for H3G7L1 as seed ortholog is 100%.

Group of orthologs #234. Best score 565 bits
Score difference with first non-orthologous sequence - L.chalumnae:565 P.ramorum:565

H3AQE4              	100.00%		H3GGW8              	100.00%
Bootstrap support for H3AQE4 as seed ortholog is 100%.
Bootstrap support for H3GGW8 as seed ortholog is 100%.

Group of orthologs #235. Best score 563 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 P.ramorum:359

H3B5V2              	100.00%		H3G996              	100.00%
H3BC85              	55.10%		
Bootstrap support for H3B5V2 as seed ortholog is 100%.
Bootstrap support for H3G996 as seed ortholog is 100%.

Group of orthologs #236. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:496 P.ramorum:136

H3BHN2              	100.00%		H3GAR9              	100.00%
H3AV76              	52.80%		
Bootstrap support for H3BHN2 as seed ortholog is 100%.
Bootstrap support for H3GAR9 as seed ortholog is 99%.

Group of orthologs #237. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:562

H3A521              	100.00%		H3G8W2              	100.00%
Bootstrap support for H3A521 as seed ortholog is 100%.
Bootstrap support for H3G8W2 as seed ortholog is 100%.

Group of orthologs #238. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:562 P.ramorum:562

H3AYK7              	100.00%		H3G8X0              	100.00%
Bootstrap support for H3AYK7 as seed ortholog is 100%.
Bootstrap support for H3G8X0 as seed ortholog is 100%.

Group of orthologs #239. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:561 P.ramorum:561

H3AFD7              	100.00%		H3G9K7              	100.00%
Bootstrap support for H3AFD7 as seed ortholog is 100%.
Bootstrap support for H3G9K7 as seed ortholog is 100%.

Group of orthologs #240. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.ramorum:302

H3BBN1              	100.00%		H3GWG5              	100.00%
Bootstrap support for H3BBN1 as seed ortholog is 100%.
Bootstrap support for H3GWG5 as seed ortholog is 100%.

Group of orthologs #241. Best score 560 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 P.ramorum:370

H3B6I7              	100.00%		H3G9P9              	100.00%
                    	       		H3GB14              	100.00%
Bootstrap support for H3B6I7 as seed ortholog is 100%.
Bootstrap support for H3G9P9 as seed ortholog is 100%.
Bootstrap support for H3GB14 as seed ortholog is 100%.

Group of orthologs #242. Best score 560 bits
Score difference with first non-orthologous sequence - L.chalumnae:560 P.ramorum:560

H2ZWI9              	100.00%		H3GSZ4              	100.00%
Bootstrap support for H2ZWI9 as seed ortholog is 100%.
Bootstrap support for H3GSZ4 as seed ortholog is 100%.

Group of orthologs #243. Best score 559 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.ramorum:373

H2ZZW0              	100.00%		H3GAS7              	100.00%
Bootstrap support for H2ZZW0 as seed ortholog is 100%.
Bootstrap support for H3GAS7 as seed ortholog is 100%.

Group of orthologs #244. Best score 559 bits
Score difference with first non-orthologous sequence - L.chalumnae:559 P.ramorum:559

H3B4S4              	100.00%		H3G8P9              	100.00%
Bootstrap support for H3B4S4 as seed ortholog is 100%.
Bootstrap support for H3G8P9 as seed ortholog is 100%.

Group of orthologs #245. Best score 559 bits
Score difference with first non-orthologous sequence - L.chalumnae:490 P.ramorum:559

H3AKH6              	100.00%		H3GSH8              	100.00%
Bootstrap support for H3AKH6 as seed ortholog is 100%.
Bootstrap support for H3GSH8 as seed ortholog is 100%.

Group of orthologs #246. Best score 557 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.ramorum:203

H3ACR9              	100.00%		H3G9I9              	100.00%
H3B5A9              	16.98%		
Bootstrap support for H3ACR9 as seed ortholog is 100%.
Bootstrap support for H3G9I9 as seed ortholog is 100%.

Group of orthologs #247. Best score 557 bits
Score difference with first non-orthologous sequence - L.chalumnae:557 P.ramorum:557

H3ASK0              	100.00%		H3GG74              	100.00%
Bootstrap support for H3ASK0 as seed ortholog is 100%.
Bootstrap support for H3GG74 as seed ortholog is 100%.

Group of orthologs #248. Best score 557 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:308

H3B1M4              	100.00%		H3G9G0              	100.00%
Bootstrap support for H3B1M4 as seed ortholog is 99%.
Bootstrap support for H3G9G0 as seed ortholog is 100%.

Group of orthologs #249. Best score 556 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.ramorum:374

H3A9S1              	100.00%		H3G708              	100.00%
H3ACG6              	20.60%		H3GLK6              	10.84%
H3AVD6              	18.80%		
H3B262              	15.93%		
Bootstrap support for H3A9S1 as seed ortholog is 100%.
Bootstrap support for H3G708 as seed ortholog is 100%.

Group of orthologs #250. Best score 553 bits
Score difference with first non-orthologous sequence - L.chalumnae:553 P.ramorum:553

H3B9L1              	100.00%		H3G632              	100.00%
Bootstrap support for H3B9L1 as seed ortholog is 100%.
Bootstrap support for H3G632 as seed ortholog is 100%.

Group of orthologs #251. Best score 552 bits
Score difference with first non-orthologous sequence - L.chalumnae:552 P.ramorum:98

H3AIE0              	100.00%		H3G9N6              	100.00%
H3A423              	26.08%		
Bootstrap support for H3AIE0 as seed ortholog is 100%.
Bootstrap support for H3G9N6 as seed ortholog is 99%.

Group of orthologs #252. Best score 552 bits
Score difference with first non-orthologous sequence - L.chalumnae:552 P.ramorum:552

H3ARW1              	100.00%		H3GKJ4              	100.00%
H3B1S4              	53.90%		
Bootstrap support for H3ARW1 as seed ortholog is 100%.
Bootstrap support for H3GKJ4 as seed ortholog is 100%.

Group of orthologs #253. Best score 552 bits
Score difference with first non-orthologous sequence - L.chalumnae:552 P.ramorum:552

H2ZRK5              	100.00%		H3GGG2              	100.00%
Bootstrap support for H2ZRK5 as seed ortholog is 100%.
Bootstrap support for H3GGG2 as seed ortholog is 100%.

Group of orthologs #254. Best score 550 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.ramorum:422

H3A6C7              	100.00%		H3G932              	100.00%
Bootstrap support for H3A6C7 as seed ortholog is 99%.
Bootstrap support for H3G932 as seed ortholog is 100%.

Group of orthologs #255. Best score 550 bits
Score difference with first non-orthologous sequence - L.chalumnae:550 P.ramorum:550

H3AL71              	100.00%		H3GU31              	100.00%
Bootstrap support for H3AL71 as seed ortholog is 100%.
Bootstrap support for H3GU31 as seed ortholog is 100%.

Group of orthologs #256. Best score 549 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.ramorum:549

H3B4B2              	100.00%		H3GT35              	100.00%
Bootstrap support for H3B4B2 as seed ortholog is 99%.
Bootstrap support for H3GT35 as seed ortholog is 100%.

Group of orthologs #257. Best score 548 bits
Score difference with first non-orthologous sequence - L.chalumnae:548 P.ramorum:478

H2ZWC7              	100.00%		H3GFB0              	100.00%
H3BDM8              	35.39%		
Bootstrap support for H2ZWC7 as seed ortholog is 100%.
Bootstrap support for H3GFB0 as seed ortholog is 100%.

Group of orthologs #258. Best score 547 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:39

H3BA28              	100.00%		H3G8L9              	100.00%
H3AMF8              	85.05%		
Bootstrap support for H3BA28 as seed ortholog is 100%.
Bootstrap support for H3G8L9 as seed ortholog is 92%.

Group of orthologs #259. Best score 545 bits
Score difference with first non-orthologous sequence - L.chalumnae:545 P.ramorum:545

H3AAJ4              	100.00%		H3GFR9              	100.00%
Bootstrap support for H3AAJ4 as seed ortholog is 100%.
Bootstrap support for H3GFR9 as seed ortholog is 100%.

Group of orthologs #260. Best score 545 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:42

H3ASU0              	100.00%		H3GEM0              	100.00%
Bootstrap support for H3ASU0 as seed ortholog is 94%.
Bootstrap support for H3GEM0 as seed ortholog is 80%.

Group of orthologs #261. Best score 544 bits
Score difference with first non-orthologous sequence - L.chalumnae:544 P.ramorum:103

H3ASC3              	100.00%		H3GKG8              	100.00%
H3BEC1              	24.56%		H3GKG6              	76.80%
Bootstrap support for H3ASC3 as seed ortholog is 100%.
Bootstrap support for H3GKG8 as seed ortholog is 94%.

Group of orthologs #262. Best score 544 bits
Score difference with first non-orthologous sequence - L.chalumnae:544 P.ramorum:231

H3AYK6              	100.00%		H3GAQ8              	100.00%
Bootstrap support for H3AYK6 as seed ortholog is 100%.
Bootstrap support for H3GAQ8 as seed ortholog is 100%.

Group of orthologs #263. Best score 544 bits
Score difference with first non-orthologous sequence - L.chalumnae:544 P.ramorum:544

H3B9K2              	100.00%		H3G6Z8              	100.00%
Bootstrap support for H3B9K2 as seed ortholog is 100%.
Bootstrap support for H3G6Z8 as seed ortholog is 100%.

Group of orthologs #264. Best score 543 bits
Score difference with first non-orthologous sequence - L.chalumnae:543 P.ramorum:543

H3A4D6              	100.00%		H3G863              	100.00%
Bootstrap support for H3A4D6 as seed ortholog is 100%.
Bootstrap support for H3G863 as seed ortholog is 100%.

Group of orthologs #265. Best score 543 bits
Score difference with first non-orthologous sequence - L.chalumnae:543 P.ramorum:543

H3BHL8              	100.00%		H3H038              	100.00%
Bootstrap support for H3BHL8 as seed ortholog is 100%.
Bootstrap support for H3H038 as seed ortholog is 100%.

Group of orthologs #266. Best score 542 bits
Score difference with first non-orthologous sequence - L.chalumnae:542 P.ramorum:542

H3A5T5              	100.00%		H3GLA6              	100.00%
Bootstrap support for H3A5T5 as seed ortholog is 100%.
Bootstrap support for H3GLA6 as seed ortholog is 100%.

Group of orthologs #267. Best score 542 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.ramorum:303

H3AU41              	100.00%		H3GVG1              	100.00%
Bootstrap support for H3AU41 as seed ortholog is 100%.
Bootstrap support for H3GVG1 as seed ortholog is 100%.

Group of orthologs #268. Best score 542 bits
Score difference with first non-orthologous sequence - L.chalumnae:542 P.ramorum:542

M3XK40              	100.00%		H3GLB1              	100.00%
Bootstrap support for M3XK40 as seed ortholog is 100%.
Bootstrap support for H3GLB1 as seed ortholog is 100%.

Group of orthologs #269. Best score 541 bits
Score difference with first non-orthologous sequence - L.chalumnae:541 P.ramorum:80

H3AKG0              	100.00%		H3GAC2              	100.00%
Bootstrap support for H3AKG0 as seed ortholog is 100%.
Bootstrap support for H3GAC2 as seed ortholog is 94%.

Group of orthologs #270. Best score 540 bits
Score difference with first non-orthologous sequence - L.chalumnae:486 P.ramorum:472

H2ZTG7              	100.00%		H3GHE4              	100.00%
Bootstrap support for H2ZTG7 as seed ortholog is 100%.
Bootstrap support for H3GHE4 as seed ortholog is 100%.

Group of orthologs #271. Best score 539 bits
Score difference with first non-orthologous sequence - L.chalumnae:539 P.ramorum:539

H3BDS6              	100.00%		H3GCM9              	100.00%
Bootstrap support for H3BDS6 as seed ortholog is 100%.
Bootstrap support for H3GCM9 as seed ortholog is 100%.

Group of orthologs #272. Best score 537 bits
Score difference with first non-orthologous sequence - L.chalumnae:537 P.ramorum:537

H3A1S5              	100.00%		H3G764              	100.00%
                    	       		H3G9R8              	77.91%
Bootstrap support for H3A1S5 as seed ortholog is 100%.
Bootstrap support for H3G764 as seed ortholog is 100%.

Group of orthologs #273. Best score 536 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.ramorum:202

H3BA29              	100.00%		H3G7P5              	100.00%
Bootstrap support for H3BA29 as seed ortholog is 90%.
Bootstrap support for H3G7P5 as seed ortholog is 100%.

Group of orthologs #274. Best score 534 bits
Score difference with first non-orthologous sequence - L.chalumnae:534 P.ramorum:534

H3AHS7              	100.00%		H3H0Z5              	100.00%
Bootstrap support for H3AHS7 as seed ortholog is 100%.
Bootstrap support for H3H0Z5 as seed ortholog is 100%.

Group of orthologs #275. Best score 533 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.ramorum:60

H3AN71              	100.00%		H3G8C8              	100.00%
                    	       		H3GAP9              	51.75%
Bootstrap support for H3AN71 as seed ortholog is 100%.
Bootstrap support for H3G8C8 as seed ortholog is 94%.

Group of orthologs #276. Best score 532 bits
Score difference with first non-orthologous sequence - L.chalumnae:532 P.ramorum:532

H3BDN1              	100.00%		H3G8E9              	100.00%
Bootstrap support for H3BDN1 as seed ortholog is 100%.
Bootstrap support for H3G8E9 as seed ortholog is 100%.

Group of orthologs #277. Best score 532 bits
Score difference with first non-orthologous sequence - L.chalumnae:532 P.ramorum:532

H3BEP0              	100.00%		H3G9L9              	100.00%
Bootstrap support for H3BEP0 as seed ortholog is 100%.
Bootstrap support for H3G9L9 as seed ortholog is 100%.

Group of orthologs #278. Best score 531 bits
Score difference with first non-orthologous sequence - L.chalumnae:531 P.ramorum:531

H2ZU93              	100.00%		H3GIM1              	100.00%
H3B892              	43.39%		
Bootstrap support for H2ZU93 as seed ortholog is 100%.
Bootstrap support for H3GIM1 as seed ortholog is 100%.

Group of orthologs #279. Best score 531 bits
Score difference with first non-orthologous sequence - L.chalumnae:531 P.ramorum:531

H3B555              	100.00%		H3GVL7              	100.00%
Bootstrap support for H3B555 as seed ortholog is 100%.
Bootstrap support for H3GVL7 as seed ortholog is 100%.

Group of orthologs #280. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:227

H3A826              	100.00%		H3HDI7              	100.00%
H3ASY1              	52.69%		H3G8F1              	9.96%
H3ASS5              	40.26%		
Bootstrap support for H3A826 as seed ortholog is 99%.
Bootstrap support for H3HDI7 as seed ortholog is 100%.

Group of orthologs #281. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 P.ramorum:178

H3ASI3              	100.00%		H3GHF2              	100.00%
H3B6Q6              	13.23%		
Bootstrap support for H3ASI3 as seed ortholog is 100%.
Bootstrap support for H3GHF2 as seed ortholog is 99%.

Group of orthologs #282. Best score 529 bits
Score difference with first non-orthologous sequence - L.chalumnae:529 P.ramorum:529

H3B5Y6              	100.00%		H3H2X5              	100.00%
Bootstrap support for H3B5Y6 as seed ortholog is 100%.
Bootstrap support for H3H2X5 as seed ortholog is 100%.

Group of orthologs #283. Best score 527 bits
Score difference with first non-orthologous sequence - L.chalumnae:527 P.ramorum:527

H3BI66              	100.00%		H3G951              	100.00%
Bootstrap support for H3BI66 as seed ortholog is 100%.
Bootstrap support for H3G951 as seed ortholog is 100%.

Group of orthologs #284. Best score 526 bits
Score difference with first non-orthologous sequence - L.chalumnae:526 P.ramorum:526

H3A389              	100.00%		H3GA19              	100.00%
H3A8E3              	56.13%		
Bootstrap support for H3A389 as seed ortholog is 100%.
Bootstrap support for H3GA19 as seed ortholog is 100%.

Group of orthologs #285. Best score 526 bits
Score difference with first non-orthologous sequence - L.chalumnae:418 P.ramorum:526

H3AXJ9              	100.00%		H3G704              	100.00%
Bootstrap support for H3AXJ9 as seed ortholog is 100%.
Bootstrap support for H3G704 as seed ortholog is 100%.

Group of orthologs #286. Best score 526 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.ramorum:526

H3BF73              	100.00%		H3G9H8              	100.00%
Bootstrap support for H3BF73 as seed ortholog is 100%.
Bootstrap support for H3G9H8 as seed ortholog is 100%.

Group of orthologs #287. Best score 525 bits
Score difference with first non-orthologous sequence - L.chalumnae:525 P.ramorum:525

H3A6D2              	100.00%		H3GPJ8              	100.00%
Bootstrap support for H3A6D2 as seed ortholog is 100%.
Bootstrap support for H3GPJ8 as seed ortholog is 100%.

Group of orthologs #288. Best score 525 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:158

H3BBC2              	100.00%		H3GAY8              	100.00%
Bootstrap support for H3BBC2 as seed ortholog is 99%.
Bootstrap support for H3GAY8 as seed ortholog is 100%.

Group of orthologs #289. Best score 524 bits
Score difference with first non-orthologous sequence - L.chalumnae:524 P.ramorum:524

H3AGU1              	100.00%		H3GR72              	100.00%
H2ZV63              	65.42%		
Bootstrap support for H3AGU1 as seed ortholog is 100%.
Bootstrap support for H3GR72 as seed ortholog is 100%.

Group of orthologs #290. Best score 524 bits
Score difference with first non-orthologous sequence - L.chalumnae:524 P.ramorum:524

H3A4C1              	100.00%		H3GBZ0              	100.00%
Bootstrap support for H3A4C1 as seed ortholog is 100%.
Bootstrap support for H3GBZ0 as seed ortholog is 100%.

Group of orthologs #291. Best score 524 bits
Score difference with first non-orthologous sequence - L.chalumnae:524 P.ramorum:524

H3B595              	100.00%		H3G8D2              	100.00%
Bootstrap support for H3B595 as seed ortholog is 100%.
Bootstrap support for H3G8D2 as seed ortholog is 100%.

Group of orthologs #292. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.ramorum:394

H3AEJ1              	100.00%		H3GAT7              	100.00%
H2ZZU9              	76.19%		
Bootstrap support for H3AEJ1 as seed ortholog is 100%.
Bootstrap support for H3GAT7 as seed ortholog is 100%.

Group of orthologs #293. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:138

H3A5A8              	100.00%		H3G6Z5              	100.00%
Bootstrap support for H3A5A8 as seed ortholog is 99%.
Bootstrap support for H3G6Z5 as seed ortholog is 99%.

Group of orthologs #294. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:446 P.ramorum:523

M3XKA9              	100.00%		H3GU36              	100.00%
Bootstrap support for M3XKA9 as seed ortholog is 100%.
Bootstrap support for H3GU36 as seed ortholog is 100%.

Group of orthologs #295. Best score 522 bits
Score difference with first non-orthologous sequence - L.chalumnae:522 P.ramorum:447

H3ANZ0              	100.00%		H3G8K3              	100.00%
Bootstrap support for H3ANZ0 as seed ortholog is 100%.
Bootstrap support for H3G8K3 as seed ortholog is 100%.

Group of orthologs #296. Best score 521 bits
Score difference with first non-orthologous sequence - L.chalumnae:521 P.ramorum:275

H3B7X4              	100.00%		H3GPL3              	100.00%
Bootstrap support for H3B7X4 as seed ortholog is 100%.
Bootstrap support for H3GPL3 as seed ortholog is 99%.

Group of orthologs #297. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.ramorum:337

H3AVR0              	100.00%		H3G9P8              	100.00%
H2ZZN2              	48.76%		
Bootstrap support for H3AVR0 as seed ortholog is 100%.
Bootstrap support for H3G9P8 as seed ortholog is 100%.

Group of orthologs #298. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:520

H3BAW4              	100.00%		H3G8X6              	100.00%
                    	       		H3G7A9              	10.14%
Bootstrap support for H3BAW4 as seed ortholog is 99%.
Bootstrap support for H3G8X6 as seed ortholog is 100%.

Group of orthologs #299. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:517 P.ramorum:517

H3A6N7              	100.00%		H3G8N5              	100.00%
H3AAS2              	31.96%		
Bootstrap support for H3A6N7 as seed ortholog is 100%.
Bootstrap support for H3G8N5 as seed ortholog is 100%.

Group of orthologs #300. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:373

H3AJC6              	100.00%		H3GRU7              	100.00%
                    	       		H3G534              	9.60%
Bootstrap support for H3AJC6 as seed ortholog is 89%.
Bootstrap support for H3GRU7 as seed ortholog is 100%.

Group of orthologs #301. Best score 516 bits
Score difference with first non-orthologous sequence - L.chalumnae:516 P.ramorum:516

H3AXY9              	100.00%		H3G9A1              	100.00%
H3ABQ3              	39.32%		
Bootstrap support for H3AXY9 as seed ortholog is 100%.
Bootstrap support for H3G9A1 as seed ortholog is 100%.

Group of orthologs #302. Best score 512 bits
Score difference with first non-orthologous sequence - L.chalumnae:512 P.ramorum:231

H3AQX3              	100.00%		H3G4Y1              	100.00%
Bootstrap support for H3AQX3 as seed ortholog is 100%.
Bootstrap support for H3G4Y1 as seed ortholog is 100%.

Group of orthologs #303. Best score 510 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.ramorum:395

H3BED7              	100.00%		H3G7R1              	100.00%
H3BFI3              	49.20%		
H3A4M1              	43.50%		
H3BG45              	24.82%		
Bootstrap support for H3BED7 as seed ortholog is 100%.
Bootstrap support for H3G7R1 as seed ortholog is 100%.

Group of orthologs #304. Best score 510 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:263

H3B8R3              	100.00%		H3G8F5              	100.00%
H3AQ74              	77.24%		
Bootstrap support for H3B8R3 as seed ortholog is 99%.
Bootstrap support for H3G8F5 as seed ortholog is 100%.

Group of orthologs #305. Best score 508 bits
Score difference with first non-orthologous sequence - L.chalumnae:508 P.ramorum:508

H2ZYQ9              	100.00%		H3G8H8              	100.00%
Bootstrap support for H2ZYQ9 as seed ortholog is 100%.
Bootstrap support for H3G8H8 as seed ortholog is 100%.

Group of orthologs #306. Best score 508 bits
Score difference with first non-orthologous sequence - L.chalumnae:508 P.ramorum:508

H3AE96              	100.00%		H3GJ53              	100.00%
Bootstrap support for H3AE96 as seed ortholog is 100%.
Bootstrap support for H3GJ53 as seed ortholog is 100%.

Group of orthologs #307. Best score 507 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.ramorum:507

H3AJC1              	100.00%		H3G936              	100.00%
Bootstrap support for H3AJC1 as seed ortholog is 100%.
Bootstrap support for H3G936 as seed ortholog is 100%.

Group of orthologs #308. Best score 507 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.ramorum:507

M3XJ87              	100.00%		H3G7I0              	100.00%
Bootstrap support for M3XJ87 as seed ortholog is 100%.
Bootstrap support for H3G7I0 as seed ortholog is 100%.

Group of orthologs #309. Best score 505 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:59

H3A2P0              	100.00%		H3GG43              	100.00%
H3A4W2              	39.44%		
H3ATB3              	19.61%		
Bootstrap support for H3A2P0 as seed ortholog is 69%.
Alternative seed ortholog is H3AC80 (25 bits away from this cluster)
Bootstrap support for H3GG43 as seed ortholog is 95%.

Group of orthologs #310. Best score 505 bits
Score difference with first non-orthologous sequence - L.chalumnae:505 P.ramorum:505

H3AKR8              	100.00%		H3GND3              	100.00%
Bootstrap support for H3AKR8 as seed ortholog is 100%.
Bootstrap support for H3GND3 as seed ortholog is 100%.

Group of orthologs #311. Best score 502 bits
Score difference with first non-orthologous sequence - L.chalumnae:502 P.ramorum:502

H3ALT2              	100.00%		H3G9K5              	100.00%
Bootstrap support for H3ALT2 as seed ortholog is 100%.
Bootstrap support for H3G9K5 as seed ortholog is 100%.

Group of orthologs #312. Best score 500 bits
Score difference with first non-orthologous sequence - L.chalumnae:500 P.ramorum:500

H3BCL3              	100.00%		H3GU25              	100.00%
Bootstrap support for H3BCL3 as seed ortholog is 100%.
Bootstrap support for H3GU25 as seed ortholog is 100%.

Group of orthologs #313. Best score 499 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 P.ramorum:244

H3AGK3              	100.00%		H3G780              	100.00%
Bootstrap support for H3AGK3 as seed ortholog is 100%.
Bootstrap support for H3G780 as seed ortholog is 100%.

Group of orthologs #314. Best score 499 bits
Score difference with first non-orthologous sequence - L.chalumnae:499 P.ramorum:499

H3BBQ4              	100.00%		H3G7L4              	100.00%
Bootstrap support for H3BBQ4 as seed ortholog is 100%.
Bootstrap support for H3G7L4 as seed ortholog is 100%.

Group of orthologs #315. Best score 499 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:499

H3BIH2              	100.00%		H3G8U2              	100.00%
Bootstrap support for H3BIH2 as seed ortholog is 90%.
Bootstrap support for H3G8U2 as seed ortholog is 100%.

Group of orthologs #316. Best score 496 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.ramorum:496

H3BBH3              	100.00%		H3GA10              	100.00%
Bootstrap support for H3BBH3 as seed ortholog is 100%.
Bootstrap support for H3GA10 as seed ortholog is 100%.

Group of orthologs #317. Best score 496 bits
Score difference with first non-orthologous sequence - L.chalumnae:496 P.ramorum:496

H3BID1              	100.00%		H3GZX6              	100.00%
Bootstrap support for H3BID1 as seed ortholog is 100%.
Bootstrap support for H3GZX6 as seed ortholog is 100%.

Group of orthologs #318. Best score 495 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:379

H3A126              	100.00%		H3GAE2              	100.00%
H3A2F9              	12.88%		
Bootstrap support for H3A126 as seed ortholog is 100%.
Bootstrap support for H3GAE2 as seed ortholog is 100%.

Group of orthologs #319. Best score 495 bits
Score difference with first non-orthologous sequence - L.chalumnae:495 P.ramorum:495

H3A6Y2              	100.00%		H3G986              	100.00%
H3AF78              	13.64%		
Bootstrap support for H3A6Y2 as seed ortholog is 100%.
Bootstrap support for H3G986 as seed ortholog is 100%.

Group of orthologs #320. Best score 493 bits
Score difference with first non-orthologous sequence - L.chalumnae:493 P.ramorum:92

H2ZW02              	100.00%		H3GK38              	100.00%
H3AXA5              	23.68%		H3HBW2              	83.89%
H3AWA2              	21.42%		H3GK36              	17.54%
H3B7S7              	15.53%		H3HBW6              	7.60%
Bootstrap support for H2ZW02 as seed ortholog is 100%.
Bootstrap support for H3GK38 as seed ortholog is 92%.

Group of orthologs #321. Best score 492 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.ramorum:257

H3B895              	100.00%		H3G9X7              	100.00%
Bootstrap support for H3B895 as seed ortholog is 100%.
Bootstrap support for H3G9X7 as seed ortholog is 100%.

Group of orthologs #322. Best score 492 bits
Score difference with first non-orthologous sequence - L.chalumnae:492 P.ramorum:492

H3BB85              	100.00%		H3GTQ7              	100.00%
Bootstrap support for H3BB85 as seed ortholog is 100%.
Bootstrap support for H3GTQ7 as seed ortholog is 100%.

Group of orthologs #323. Best score 491 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:352

H3AHF6              	100.00%		H3HDS0              	100.00%
H3B1Z2              	29.33%		
Bootstrap support for H3AHF6 as seed ortholog is 99%.
Bootstrap support for H3HDS0 as seed ortholog is 100%.

Group of orthologs #324. Best score 491 bits
Score difference with first non-orthologous sequence - L.chalumnae:491 P.ramorum:491

H2ZW85              	100.00%		H3G7E8              	100.00%
Bootstrap support for H2ZW85 as seed ortholog is 100%.
Bootstrap support for H3G7E8 as seed ortholog is 100%.

Group of orthologs #325. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:61

H3ARP6              	100.00%		H3G6L5              	100.00%
H3AAB0              	55.41%		H3GRK5              	53.71%
H3AJJ4              	53.04%		H3G8A1              	50.07%
H3AXU8              	38.63%		H3GRK8              	19.94%
                    	       		H3GRN4              	18.78%
Bootstrap support for H3ARP6 as seed ortholog is 99%.
Bootstrap support for H3G6L5 as seed ortholog is 90%.

Group of orthologs #326. Best score 489 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:75

H3ARA3              	100.00%		H3GWC2              	100.00%
H3BAQ6              	34.61%		
Bootstrap support for H3ARA3 as seed ortholog is 98%.
Bootstrap support for H3GWC2 as seed ortholog is 92%.

Group of orthologs #327. Best score 489 bits
Score difference with first non-orthologous sequence - L.chalumnae:372 P.ramorum:393

H3AI71              	100.00%		H3G8R2              	100.00%
Bootstrap support for H3AI71 as seed ortholog is 100%.
Bootstrap support for H3G8R2 as seed ortholog is 100%.

Group of orthologs #328. Best score 489 bits
Score difference with first non-orthologous sequence - L.chalumnae:489 P.ramorum:489

H3A3A1              	100.00%		H3H2G5              	100.00%
Bootstrap support for H3A3A1 as seed ortholog is 100%.
Bootstrap support for H3H2G5 as seed ortholog is 100%.

Group of orthologs #329. Best score 488 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:106

H3BD54              	100.00%		H3GA53              	100.00%
                    	       		H3GWZ3              	72.01%
                    	       		H3GWZ5              	62.12%
                    	       		H3GA52              	59.83%
                    	       		H3GAW6              	40.53%
                    	       		H3GAL7              	31.00%
                    	       		H3G5D4              	17.25%
Bootstrap support for H3BD54 as seed ortholog is 100%.
Bootstrap support for H3GA53 as seed ortholog is 98%.

Group of orthologs #330. Best score 487 bits
Score difference with first non-orthologous sequence - L.chalumnae:487 P.ramorum:487

H3BFM4              	100.00%		H3G762              	100.00%
H3AHP8              	36.45%		
Bootstrap support for H3BFM4 as seed ortholog is 100%.
Bootstrap support for H3G762 as seed ortholog is 100%.

Group of orthologs #331. Best score 486 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:486

H3A0I9              	100.00%		H3G9Y1              	100.00%
Bootstrap support for H3A0I9 as seed ortholog is 98%.
Bootstrap support for H3G9Y1 as seed ortholog is 100%.

Group of orthologs #332. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:306

H3BAF3              	100.00%		H3G7D3              	100.00%
Bootstrap support for H3BAF3 as seed ortholog is 79%.
Bootstrap support for H3G7D3 as seed ortholog is 100%.

Group of orthologs #333. Best score 484 bits
Score difference with first non-orthologous sequence - L.chalumnae:484 P.ramorum:184

H3BIR3              	100.00%		H3G8K2              	100.00%
Bootstrap support for H3BIR3 as seed ortholog is 100%.
Bootstrap support for H3G8K2 as seed ortholog is 99%.

Group of orthologs #334. Best score 483 bits
Score difference with first non-orthologous sequence - L.chalumnae:483 P.ramorum:483

H3AVP6              	100.00%		H3H5S2              	100.00%
                    	       		H3H4F0              	63.26%
Bootstrap support for H3AVP6 as seed ortholog is 100%.
Bootstrap support for H3H5S2 as seed ortholog is 100%.

Group of orthologs #335. Best score 483 bits
Score difference with first non-orthologous sequence - L.chalumnae:483 P.ramorum:256

H3B800              	100.00%		H3H5G2              	100.00%
Bootstrap support for H3B800 as seed ortholog is 100%.
Bootstrap support for H3H5G2 as seed ortholog is 100%.

Group of orthologs #336. Best score 482 bits
Score difference with first non-orthologous sequence - L.chalumnae:482 P.ramorum:482

H2ZTU5              	100.00%		H3GED5              	100.00%
H2ZZT5              	38.03%		
Bootstrap support for H2ZTU5 as seed ortholog is 100%.
Bootstrap support for H3GED5 as seed ortholog is 100%.

Group of orthologs #337. Best score 479 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:185

H3A561              	100.00%		H3GA49              	100.00%
                    	       		H3G616              	8.35%
Bootstrap support for H3A561 as seed ortholog is 99%.
Bootstrap support for H3GA49 as seed ortholog is 100%.

Group of orthologs #338. Best score 479 bits
Score difference with first non-orthologous sequence - L.chalumnae:479 P.ramorum:479

H3AJK3              	100.00%		H3GCB7              	100.00%
Bootstrap support for H3AJK3 as seed ortholog is 100%.
Bootstrap support for H3GCB7 as seed ortholog is 100%.

Group of orthologs #339. Best score 479 bits
Score difference with first non-orthologous sequence - L.chalumnae:479 P.ramorum:76

H3B692              	100.00%		H3GNL8              	100.00%
Bootstrap support for H3B692 as seed ortholog is 100%.
Bootstrap support for H3GNL8 as seed ortholog is 89%.

Group of orthologs #340. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:477 P.ramorum:477

H3AW57              	100.00%		H3GDF8              	100.00%
Bootstrap support for H3AW57 as seed ortholog is 100%.
Bootstrap support for H3GDF8 as seed ortholog is 100%.

Group of orthologs #341. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:477 P.ramorum:211

H3B0G7              	100.00%		H3GBC8              	100.00%
Bootstrap support for H3B0G7 as seed ortholog is 100%.
Bootstrap support for H3GBC8 as seed ortholog is 99%.

Group of orthologs #342. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:429 P.ramorum:477

M3XJ38              	100.00%		H3G905              	100.00%
Bootstrap support for M3XJ38 as seed ortholog is 100%.
Bootstrap support for H3G905 as seed ortholog is 100%.

Group of orthologs #343. Best score 476 bits
Score difference with first non-orthologous sequence - L.chalumnae:476 P.ramorum:476

H3AXA8              	100.00%		H3GQ20              	100.00%
H3AXN8              	33.49%		
H3AVW4              	26.75%		
Bootstrap support for H3AXA8 as seed ortholog is 100%.
Bootstrap support for H3GQ20 as seed ortholog is 100%.

Group of orthologs #344. Best score 476 bits
Score difference with first non-orthologous sequence - L.chalumnae:476 P.ramorum:476

H3B6L0              	100.00%		H3H197              	100.00%
Bootstrap support for H3B6L0 as seed ortholog is 100%.
Bootstrap support for H3H197 as seed ortholog is 100%.

Group of orthologs #345. Best score 475 bits
Score difference with first non-orthologous sequence - L.chalumnae:475 P.ramorum:475

H2ZYS3              	100.00%		H3GA60              	100.00%
H3A6P8              	42.83%		H3GXA3              	23.29%
Bootstrap support for H2ZYS3 as seed ortholog is 100%.
Bootstrap support for H3GA60 as seed ortholog is 100%.

Group of orthologs #346. Best score 475 bits
Score difference with first non-orthologous sequence - L.chalumnae:475 P.ramorum:475

H3BBQ3              	100.00%		H3GAL0              	100.00%
H3B0F5              	53.38%		
H3AYA8              	28.44%		
Bootstrap support for H3BBQ3 as seed ortholog is 100%.
Bootstrap support for H3GAL0 as seed ortholog is 100%.

Group of orthologs #347. Best score 475 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:144

H3ANS0              	100.00%		H3GA61              	100.00%
Bootstrap support for H3ANS0 as seed ortholog is 99%.
Bootstrap support for H3GA61 as seed ortholog is 99%.

Group of orthologs #348. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:402 P.ramorum:472

H3AZV3              	100.00%		H3G8Z2              	100.00%
                    	       		H3G5L4              	76.10%
Bootstrap support for H3AZV3 as seed ortholog is 100%.
Bootstrap support for H3G8Z2 as seed ortholog is 100%.

Group of orthologs #349. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 P.ramorum:261

H3A0G7              	100.00%		H3G8E4              	100.00%
Bootstrap support for H3A0G7 as seed ortholog is 100%.
Bootstrap support for H3G8E4 as seed ortholog is 100%.

Group of orthologs #350. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 P.ramorum:472

H3B4Y5              	100.00%		H3GEW8              	100.00%
Bootstrap support for H3B4Y5 as seed ortholog is 100%.
Bootstrap support for H3GEW8 as seed ortholog is 100%.

Group of orthologs #351. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 P.ramorum:282

M3XI24              	100.00%		H3H1Y7              	100.00%
Bootstrap support for M3XI24 as seed ortholog is 100%.
Bootstrap support for H3H1Y7 as seed ortholog is 100%.

Group of orthologs #352. Best score 471 bits
Score difference with first non-orthologous sequence - L.chalumnae:471 P.ramorum:471

H3A703              	100.00%		H3GA81              	100.00%
Bootstrap support for H3A703 as seed ortholog is 100%.
Bootstrap support for H3GA81 as seed ortholog is 100%.

Group of orthologs #353. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:470 P.ramorum:470

H3ABG6              	100.00%		H3G9E8              	100.00%
H2ZU38              	35.18%		
Bootstrap support for H3ABG6 as seed ortholog is 100%.
Bootstrap support for H3G9E8 as seed ortholog is 100%.

Group of orthologs #354. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.ramorum:255

H3B087              	100.00%		H3G608              	100.00%
Bootstrap support for H3B087 as seed ortholog is 100%.
Bootstrap support for H3G608 as seed ortholog is 100%.

Group of orthologs #355. Best score 469 bits
Score difference with first non-orthologous sequence - L.chalumnae:469 P.ramorum:361

H3B216              	100.00%		H3G8F6              	100.00%
H3B3N8              	58.25%		H3GED8              	58.12%
Bootstrap support for H3B216 as seed ortholog is 100%.
Bootstrap support for H3G8F6 as seed ortholog is 100%.

Group of orthologs #356. Best score 468 bits
Score difference with first non-orthologous sequence - L.chalumnae:468 P.ramorum:468

H3BBB9              	100.00%		H3GUI9              	100.00%
H3ALP2              	29.48%		
H3B8J9              	22.39%		
Bootstrap support for H3BBB9 as seed ortholog is 100%.
Bootstrap support for H3GUI9 as seed ortholog is 100%.

Group of orthologs #357. Best score 468 bits
Score difference with first non-orthologous sequence - L.chalumnae:468 P.ramorum:468

H3ASP8              	100.00%		H3G4Y5              	100.00%
Bootstrap support for H3ASP8 as seed ortholog is 100%.
Bootstrap support for H3G4Y5 as seed ortholog is 100%.

Group of orthologs #358. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.ramorum:225

H3AYE0              	100.00%		H3G5B8              	100.00%
H3BHH5              	60.16%		
H3AEI2              	34.24%		
Bootstrap support for H3AYE0 as seed ortholog is 100%.
Bootstrap support for H3G5B8 as seed ortholog is 99%.

Group of orthologs #359. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.ramorum:277

M3XKG4              	100.00%		H3G7Y1              	100.00%
                    	       		H3HDZ1              	49.54%
                    	       		H3G7Y2              	47.32%
Bootstrap support for M3XKG4 as seed ortholog is 100%.
Bootstrap support for H3G7Y1 as seed ortholog is 100%.

Group of orthologs #360. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:467 P.ramorum:467

H3ASB1              	100.00%		H3GAH7              	100.00%
Bootstrap support for H3ASB1 as seed ortholog is 100%.
Bootstrap support for H3GAH7 as seed ortholog is 100%.

Group of orthologs #361. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:353 P.ramorum:381

H3B5L5              	100.00%		H3G5G7              	100.00%
Bootstrap support for H3B5L5 as seed ortholog is 100%.
Bootstrap support for H3G5G7 as seed ortholog is 100%.

Group of orthologs #362. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:467 P.ramorum:467

H3B8M2              	100.00%		H3H3A8              	100.00%
Bootstrap support for H3B8M2 as seed ortholog is 100%.
Bootstrap support for H3H3A8 as seed ortholog is 100%.

Group of orthologs #363. Best score 466 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.ramorum:466

H3A8B9              	100.00%		H3G8L6              	100.00%
                    	       		H3GAH4              	22.22%
Bootstrap support for H3A8B9 as seed ortholog is 100%.
Bootstrap support for H3G8L6 as seed ortholog is 100%.

Group of orthologs #364. Best score 466 bits
Score difference with first non-orthologous sequence - L.chalumnae:466 P.ramorum:466

H3A040              	100.00%		H3GCS0              	100.00%
Bootstrap support for H3A040 as seed ortholog is 100%.
Bootstrap support for H3GCS0 as seed ortholog is 100%.

Group of orthologs #365. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.ramorum:465

H3BFG2              	100.00%		H3GFN9              	100.00%
H2ZV12              	29.45%		
H3AAU3              	29.00%		
H3A9Y4              	17.20%		
H3APD8              	13.09%		
H2ZS54              	8.45%		
Bootstrap support for H3BFG2 as seed ortholog is 99%.
Bootstrap support for H3GFN9 as seed ortholog is 100%.

Group of orthologs #366. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.ramorum:465

H3A3L5              	100.00%		H3GQ19              	100.00%
Bootstrap support for H3A3L5 as seed ortholog is 100%.
Bootstrap support for H3GQ19 as seed ortholog is 100%.

Group of orthologs #367. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.ramorum:465

H2ZUG2              	100.00%		H3HBV5              	100.00%
Bootstrap support for H2ZUG2 as seed ortholog is 100%.
Bootstrap support for H3HBV5 as seed ortholog is 100%.

Group of orthologs #368. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.ramorum:465

H3ATV4              	100.00%		H3HE68              	100.00%
Bootstrap support for H3ATV4 as seed ortholog is 100%.
Bootstrap support for H3HE68 as seed ortholog is 100%.

Group of orthologs #369. Best score 464 bits
Score difference with first non-orthologous sequence - L.chalumnae:464 P.ramorum:464

H3AT42              	100.00%		H3G5F5              	100.00%
H3AWZ8              	40.38%		H3G8X8              	100.00%
                    	       		H3G7K6              	75.57%
Bootstrap support for H3AT42 as seed ortholog is 100%.
Bootstrap support for H3G5F5 as seed ortholog is 100%.
Bootstrap support for H3G8X8 as seed ortholog is 100%.

Group of orthologs #370. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:10

H3AI32              	100.00%		H3H2Q0              	100.00%
                    	       		H3GK12              	13.30%
Bootstrap support for H3AI32 as seed ortholog is 70%.
Alternative seed ortholog is H3AF09 (54 bits away from this cluster)
Bootstrap support for H3H2Q0 as seed ortholog is 64%.
Alternative seed ortholog is H3GD90 (10 bits away from this cluster)

Group of orthologs #371. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:369

H3BE86              	100.00%		H3HE00              	100.00%
H2ZST8              	6.60%		
Bootstrap support for H3BE86 as seed ortholog is 54%.
Alternative seed ortholog is H3B909 (103 bits away from this cluster)
Bootstrap support for H3HE00 as seed ortholog is 100%.

Group of orthologs #372. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 P.ramorum:360

H3A660              	100.00%		H3G5D1              	100.00%
Bootstrap support for H3A660 as seed ortholog is 100%.
Bootstrap support for H3G5D1 as seed ortholog is 100%.

Group of orthologs #373. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 P.ramorum:463

H2ZYJ0              	100.00%		H3GNQ3              	100.00%
Bootstrap support for H2ZYJ0 as seed ortholog is 100%.
Bootstrap support for H3GNQ3 as seed ortholog is 100%.

Group of orthologs #374. Best score 462 bits
Score difference with first non-orthologous sequence - L.chalumnae:462 P.ramorum:462

H3A1Z2              	100.00%		H3GKE7              	100.00%
                    	       		H3HAI9              	100.00%
Bootstrap support for H3A1Z2 as seed ortholog is 100%.
Bootstrap support for H3GKE7 as seed ortholog is 100%.
Bootstrap support for H3HAI9 as seed ortholog is 100%.

Group of orthologs #375. Best score 462 bits
Score difference with first non-orthologous sequence - L.chalumnae:462 P.ramorum:462

H3BEB4              	100.00%		H3GAC0              	100.00%
Bootstrap support for H3BEB4 as seed ortholog is 100%.
Bootstrap support for H3GAC0 as seed ortholog is 100%.

Group of orthologs #376. Best score 461 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:289

H3ACJ6              	100.00%		H3G7T0              	100.00%
H3AT64              	100.00%		
Bootstrap support for H3ACJ6 as seed ortholog is 100%.
Bootstrap support for H3AT64 as seed ortholog is 100%.
Bootstrap support for H3G7T0 as seed ortholog is 100%.

Group of orthologs #377. Best score 460 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 P.ramorum:275

H3BBW4              	100.00%		H3G5E4              	100.00%
                    	       		H3G6J2              	100.00%
Bootstrap support for H3BBW4 as seed ortholog is 100%.
Bootstrap support for H3G5E4 as seed ortholog is 100%.
Bootstrap support for H3G6J2 as seed ortholog is 100%.

Group of orthologs #378. Best score 459 bits
Score difference with first non-orthologous sequence - L.chalumnae:377 P.ramorum:459

H3AEM3              	100.00%		H3GTK3              	100.00%
Bootstrap support for H3AEM3 as seed ortholog is 100%.
Bootstrap support for H3GTK3 as seed ortholog is 100%.

Group of orthologs #379. Best score 459 bits
Score difference with first non-orthologous sequence - L.chalumnae:459 P.ramorum:459

H2ZY34              	100.00%		H3HDS6              	100.00%
Bootstrap support for H2ZY34 as seed ortholog is 100%.
Bootstrap support for H3HDS6 as seed ortholog is 100%.

Group of orthologs #380. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:458 P.ramorum:210

H3ACG7              	100.00%		H3H2Y0              	100.00%
H3AJT7              	30.91%		
Bootstrap support for H3ACG7 as seed ortholog is 100%.
Bootstrap support for H3H2Y0 as seed ortholog is 97%.

Group of orthologs #381. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.ramorum:210

H3APY0              	100.00%		H3GY14              	100.00%
H3BA91              	54.93%		
Bootstrap support for H3APY0 as seed ortholog is 99%.
Bootstrap support for H3GY14 as seed ortholog is 99%.

Group of orthologs #382. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:458 P.ramorum:458

H3AHN5              	100.00%		H3GAU7              	100.00%
Bootstrap support for H3AHN5 as seed ortholog is 100%.
Bootstrap support for H3GAU7 as seed ortholog is 100%.

Group of orthologs #383. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:458

H3APH3              	100.00%		H3GDU3              	100.00%
Bootstrap support for H3APH3 as seed ortholog is 81%.
Bootstrap support for H3GDU3 as seed ortholog is 100%.

Group of orthologs #384. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.ramorum:458

H3BG34              	100.00%		H3GM44              	100.00%
Bootstrap support for H3BG34 as seed ortholog is 100%.
Bootstrap support for H3GM44 as seed ortholog is 100%.

Group of orthologs #385. Best score 457 bits
Score difference with first non-orthologous sequence - L.chalumnae:457 P.ramorum:457

H3A1Q8              	100.00%		H3GCM4              	100.00%
Bootstrap support for H3A1Q8 as seed ortholog is 100%.
Bootstrap support for H3GCM4 as seed ortholog is 100%.

Group of orthologs #386. Best score 457 bits
Score difference with first non-orthologous sequence - L.chalumnae:457 P.ramorum:457

H3ALL0              	100.00%		H3G9J0              	100.00%
Bootstrap support for H3ALL0 as seed ortholog is 100%.
Bootstrap support for H3G9J0 as seed ortholog is 100%.

Group of orthologs #387. Best score 457 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.ramorum:143

H2ZXC4              	100.00%		H3GX21              	100.00%
Bootstrap support for H2ZXC4 as seed ortholog is 100%.
Bootstrap support for H3GX21 as seed ortholog is 99%.

Group of orthologs #388. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:456 P.ramorum:404

H3A6Q8              	100.00%		H3GC09              	100.00%
Bootstrap support for H3A6Q8 as seed ortholog is 100%.
Bootstrap support for H3GC09 as seed ortholog is 100%.

Group of orthologs #389. Best score 455 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 P.ramorum:5

H3AST4              	100.00%		H3G963              	100.00%
H3A702              	7.43%		H3G964              	92.86%
                    	       		H3G695              	89.92%
Bootstrap support for H3AST4 as seed ortholog is 100%.
Bootstrap support for H3G963 as seed ortholog is 56%.
Alternative seed ortholog is H3G874 (5 bits away from this cluster)

Group of orthologs #390. Best score 455 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 P.ramorum:455

H2ZTY7              	100.00%		H3GBM0              	100.00%
Bootstrap support for H2ZTY7 as seed ortholog is 100%.
Bootstrap support for H3GBM0 as seed ortholog is 100%.

Group of orthologs #391. Best score 454 bits
Score difference with first non-orthologous sequence - L.chalumnae:454 P.ramorum:454

H2ZXG4              	100.00%		H3G851              	100.00%
                    	       		H3GBH1              	37.50%
Bootstrap support for H2ZXG4 as seed ortholog is 100%.
Bootstrap support for H3G851 as seed ortholog is 100%.

Group of orthologs #392. Best score 454 bits
Score difference with first non-orthologous sequence - L.chalumnae:454 P.ramorum:454

H3A050              	100.00%		H3G8V7              	100.00%
                    	       		H3G5G8              	49.67%
Bootstrap support for H3A050 as seed ortholog is 100%.
Bootstrap support for H3G8V7 as seed ortholog is 100%.

Group of orthologs #393. Best score 454 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:101

H3A259              	100.00%		H3G782              	100.00%
H3A1V4              	53.47%		
Bootstrap support for H3A259 as seed ortholog is 100%.
Bootstrap support for H3G782 as seed ortholog is 99%.

Group of orthologs #394. Best score 454 bits
Score difference with first non-orthologous sequence - L.chalumnae:454 P.ramorum:454

H2ZVC0              	100.00%		H3G6D2              	100.00%
Bootstrap support for H2ZVC0 as seed ortholog is 100%.
Bootstrap support for H3G6D2 as seed ortholog is 100%.

Group of orthologs #395. Best score 453 bits
Score difference with first non-orthologous sequence - L.chalumnae:453 P.ramorum:453

H3B9W8              	100.00%		H3G756              	100.00%
H3AA09              	8.51%		
Bootstrap support for H3B9W8 as seed ortholog is 100%.
Bootstrap support for H3G756 as seed ortholog is 100%.

Group of orthologs #396. Best score 452 bits
Score difference with first non-orthologous sequence - L.chalumnae:452 P.ramorum:452

H3AKW1              	100.00%		H3GFN8              	100.00%
H3AMT7              	8.50%		
Bootstrap support for H3AKW1 as seed ortholog is 100%.
Bootstrap support for H3GFN8 as seed ortholog is 100%.

Group of orthologs #397. Best score 451 bits
Score difference with first non-orthologous sequence - L.chalumnae:451 P.ramorum:25

M3XJ18              	100.00%		H3G9K6              	100.00%
M3XK23              	52.26%		
H3BDQ2              	21.98%		
H3AGW4              	19.47%		
Bootstrap support for M3XJ18 as seed ortholog is 100%.
Bootstrap support for H3G9K6 as seed ortholog is 73%.
Alternative seed ortholog is H3G6Z0 (25 bits away from this cluster)

Group of orthologs #398. Best score 451 bits
Score difference with first non-orthologous sequence - L.chalumnae:451 P.ramorum:451

H3AWF8              	100.00%		H3G928              	100.00%
Bootstrap support for H3AWF8 as seed ortholog is 100%.
Bootstrap support for H3G928 as seed ortholog is 100%.

Group of orthologs #399. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 P.ramorum:450

H3AQC9              	100.00%		H3GQR2              	100.00%
Bootstrap support for H3AQC9 as seed ortholog is 100%.
Bootstrap support for H3GQR2 as seed ortholog is 100%.

Group of orthologs #400. Best score 449 bits
Score difference with first non-orthologous sequence - L.chalumnae:449 P.ramorum:449

H3AJZ4              	100.00%		H3G886              	100.00%
Bootstrap support for H3AJZ4 as seed ortholog is 100%.
Bootstrap support for H3G886 as seed ortholog is 100%.

Group of orthologs #401. Best score 449 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.ramorum:380

H3B6C1              	100.00%		H3GFF2              	100.00%
Bootstrap support for H3B6C1 as seed ortholog is 100%.
Bootstrap support for H3GFF2 as seed ortholog is 100%.

Group of orthologs #402. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:448 P.ramorum:319

H3AUY3              	100.00%		H3GIT1              	100.00%
Bootstrap support for H3AUY3 as seed ortholog is 100%.
Bootstrap support for H3GIT1 as seed ortholog is 100%.

Group of orthologs #403. Best score 447 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:447

H3BGP9              	100.00%		H3G950              	100.00%
Bootstrap support for H3BGP9 as seed ortholog is 99%.
Bootstrap support for H3G950 as seed ortholog is 100%.

Group of orthologs #404. Best score 447 bits
Score difference with first non-orthologous sequence - L.chalumnae:447 P.ramorum:447

H3BA16              	100.00%		H3HDR1              	100.00%
Bootstrap support for H3BA16 as seed ortholog is 100%.
Bootstrap support for H3HDR1 as seed ortholog is 100%.

Group of orthologs #405. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:286

H3A2S9              	100.00%		H3G9B3              	100.00%
H3A9U2              	51.48%		
Bootstrap support for H3A2S9 as seed ortholog is 100%.
Bootstrap support for H3G9B3 as seed ortholog is 100%.

Group of orthologs #406. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:446 P.ramorum:446

H3A8T1              	100.00%		H3GVL6              	100.00%
H3BFX4              	37.30%		
Bootstrap support for H3A8T1 as seed ortholog is 100%.
Bootstrap support for H3GVL6 as seed ortholog is 100%.

Group of orthologs #407. Best score 445 bits
Score difference with first non-orthologous sequence - L.chalumnae:445 P.ramorum:445

M3XIL3              	100.00%		H3GIY0              	100.00%
Bootstrap support for M3XIL3 as seed ortholog is 100%.
Bootstrap support for H3GIY0 as seed ortholog is 100%.

Group of orthologs #408. Best score 444 bits
Score difference with first non-orthologous sequence - L.chalumnae:444 P.ramorum:444

H3B669              	100.00%		H3GAH2              	100.00%
H2ZW57              	55.00%		H3GAH1              	92.03%
Bootstrap support for H3B669 as seed ortholog is 100%.
Bootstrap support for H3GAH2 as seed ortholog is 100%.

Group of orthologs #409. Best score 444 bits
Score difference with first non-orthologous sequence - L.chalumnae:444 P.ramorum:194

H3AK78              	100.00%		H3GA44              	100.00%
H2ZS69              	61.57%		
Bootstrap support for H3AK78 as seed ortholog is 100%.
Bootstrap support for H3GA44 as seed ortholog is 100%.

Group of orthologs #410. Best score 444 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:29

H3BFY5              	100.00%		H3G9N8              	100.00%
Bootstrap support for H3BFY5 as seed ortholog is 100%.
Bootstrap support for H3G9N8 as seed ortholog is 83%.

Group of orthologs #411. Best score 442 bits
Score difference with first non-orthologous sequence - L.chalumnae:442 P.ramorum:100

H3AU01              	100.00%		H3H125              	100.00%
H3B5R1              	20.83%		
H3AQF9              	6.97%		
Bootstrap support for H3AU01 as seed ortholog is 100%.
Bootstrap support for H3H125 as seed ortholog is 97%.

Group of orthologs #412. Best score 442 bits
Score difference with first non-orthologous sequence - L.chalumnae:442 P.ramorum:146

H3AYH7              	100.00%		H3GHW8              	100.00%
Bootstrap support for H3AYH7 as seed ortholog is 100%.
Bootstrap support for H3GHW8 as seed ortholog is 99%.

Group of orthologs #413. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:441 P.ramorum:441

H3A2Q5              	100.00%		H3G7L0              	100.00%
H3BDM9              	80.68%		
H3B034              	79.32%		
H3AWC0              	78.41%		
Bootstrap support for H3A2Q5 as seed ortholog is 100%.
Bootstrap support for H3G7L0 as seed ortholog is 100%.

Group of orthologs #414. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:441 P.ramorum:441

H2ZYA8              	100.00%		H3GV61              	100.00%
H3BDJ1              	33.90%		H3G7E1              	55.63%
H3AR52              	25.85%		
Bootstrap support for H2ZYA8 as seed ortholog is 100%.
Bootstrap support for H3GV61 as seed ortholog is 100%.

Group of orthologs #415. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 P.ramorum:440

H3AVK0              	100.00%		H3GA39              	100.00%
Bootstrap support for H3AVK0 as seed ortholog is 100%.
Bootstrap support for H3GA39 as seed ortholog is 100%.

Group of orthologs #416. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 P.ramorum:440

H3AZU8              	100.00%		H3G9Q8              	100.00%
Bootstrap support for H3AZU8 as seed ortholog is 100%.
Bootstrap support for H3G9Q8 as seed ortholog is 100%.

Group of orthologs #417. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 P.ramorum:440

H3BFU7              	100.00%		H3G9H1              	100.00%
Bootstrap support for H3BFU7 as seed ortholog is 100%.
Bootstrap support for H3G9H1 as seed ortholog is 100%.

Group of orthologs #418. Best score 438 bits
Score difference with first non-orthologous sequence - L.chalumnae:438 P.ramorum:438

H3API7              	100.00%		H3G9I3              	100.00%
Bootstrap support for H3API7 as seed ortholog is 100%.
Bootstrap support for H3G9I3 as seed ortholog is 100%.

Group of orthologs #419. Best score 438 bits
Score difference with first non-orthologous sequence - L.chalumnae:438 P.ramorum:438

H3APE0              	100.00%		H3GT71              	100.00%
Bootstrap support for H3APE0 as seed ortholog is 100%.
Bootstrap support for H3GT71 as seed ortholog is 100%.

Group of orthologs #420. Best score 437 bits
Score difference with first non-orthologous sequence - L.chalumnae:437 P.ramorum:437

H3AG19              	100.00%		H3GK74              	100.00%
H3ASG2              	59.59%		
H3A196              	58.86%		
Bootstrap support for H3AG19 as seed ortholog is 100%.
Bootstrap support for H3GK74 as seed ortholog is 100%.

Group of orthologs #421. Best score 437 bits
Score difference with first non-orthologous sequence - L.chalumnae:437 P.ramorum:437

H2ZU31              	100.00%		H3G8D0              	100.00%
Bootstrap support for H2ZU31 as seed ortholog is 100%.
Bootstrap support for H3G8D0 as seed ortholog is 100%.

Group of orthologs #422. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.ramorum:43

H3BC00              	100.00%		H3H542              	100.00%
M3XGJ9              	15.72%		H3H433              	40.23%
                    	       		H3GZW0              	26.03%
Bootstrap support for H3BC00 as seed ortholog is 99%.
Bootstrap support for H3H542 as seed ortholog is 71%.
Alternative seed ortholog is H3GZV5 (43 bits away from this cluster)

Group of orthologs #423. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:436 P.ramorum:436

H2ZZN1              	100.00%		H3HCN8              	100.00%
Bootstrap support for H2ZZN1 as seed ortholog is 100%.
Bootstrap support for H3HCN8 as seed ortholog is 100%.

Group of orthologs #424. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:436

M3XJT3              	100.00%		H3G751              	100.00%
Bootstrap support for M3XJT3 as seed ortholog is 100%.
Bootstrap support for H3G751 as seed ortholog is 100%.

Group of orthologs #425. Best score 435 bits
Score difference with first non-orthologous sequence - L.chalumnae:435 P.ramorum:435

H2ZVZ4              	100.00%		H3G8A9              	100.00%
Bootstrap support for H2ZVZ4 as seed ortholog is 100%.
Bootstrap support for H3G8A9 as seed ortholog is 100%.

Group of orthologs #426. Best score 435 bits
Score difference with first non-orthologous sequence - L.chalumnae:435 P.ramorum:435

H3A516              	100.00%		H3G9L0              	100.00%
Bootstrap support for H3A516 as seed ortholog is 100%.
Bootstrap support for H3G9L0 as seed ortholog is 100%.

Group of orthologs #427. Best score 435 bits
Score difference with first non-orthologous sequence - L.chalumnae:435 P.ramorum:435

H3AQ69              	100.00%		H3GQU9              	100.00%
Bootstrap support for H3AQ69 as seed ortholog is 100%.
Bootstrap support for H3GQU9 as seed ortholog is 100%.

Group of orthologs #428. Best score 435 bits
Score difference with first non-orthologous sequence - L.chalumnae:384 P.ramorum:435

H3AZF0              	100.00%		H3H4C8              	100.00%
Bootstrap support for H3AZF0 as seed ortholog is 100%.
Bootstrap support for H3H4C8 as seed ortholog is 100%.

Group of orthologs #429. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 P.ramorum:107

H3ATQ9              	100.00%		H3G6G9              	100.00%
Bootstrap support for H3ATQ9 as seed ortholog is 100%.
Bootstrap support for H3G6G9 as seed ortholog is 99%.

Group of orthologs #430. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.ramorum:282

H3A4R9              	100.00%		H3GSZ7              	100.00%
Bootstrap support for H3A4R9 as seed ortholog is 99%.
Bootstrap support for H3GSZ7 as seed ortholog is 100%.

Group of orthologs #431. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.ramorum:433

H3BC39              	100.00%		H3G5V8              	100.00%
Bootstrap support for H3BC39 as seed ortholog is 100%.
Bootstrap support for H3G5V8 as seed ortholog is 100%.

Group of orthologs #432. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.ramorum:178

H3AMW3              	100.00%		H3GCA4              	100.00%
H3AFY2              	53.17%		
H3A1E2              	41.77%		
H2ZUL4              	29.25%		
H3BHX5              	26.83%		
H3AX65              	15.27%		
H3AD80              	5.15%		
Bootstrap support for H3AMW3 as seed ortholog is 75%.
Bootstrap support for H3GCA4 as seed ortholog is 99%.

Group of orthologs #433. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:432 P.ramorum:432

H3BFU0              	100.00%		H3GWU1              	100.00%
Bootstrap support for H3BFU0 as seed ortholog is 100%.
Bootstrap support for H3GWU1 as seed ortholog is 100%.

Group of orthologs #434. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 P.ramorum:431

H3AKD1              	100.00%		H3G8E0              	100.00%
Bootstrap support for H3AKD1 as seed ortholog is 100%.
Bootstrap support for H3G8E0 as seed ortholog is 100%.

Group of orthologs #435. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 P.ramorum:431

H3AUI3              	100.00%		H3G8M7              	100.00%
Bootstrap support for H3AUI3 as seed ortholog is 100%.
Bootstrap support for H3G8M7 as seed ortholog is 100%.

Group of orthologs #436. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:430 P.ramorum:430

H3BDP2              	100.00%		H3GLQ1              	100.00%
H3A4X6              	54.08%		
Bootstrap support for H3BDP2 as seed ortholog is 100%.
Bootstrap support for H3GLQ1 as seed ortholog is 100%.

Group of orthologs #437. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 P.ramorum:308

H3A1L6              	100.00%		H3G8Y5              	100.00%
Bootstrap support for H3A1L6 as seed ortholog is 100%.
Bootstrap support for H3G8Y5 as seed ortholog is 100%.

Group of orthologs #438. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:430 P.ramorum:430

H3ABN2              	100.00%		H3G6Y2              	100.00%
Bootstrap support for H3ABN2 as seed ortholog is 100%.
Bootstrap support for H3G6Y2 as seed ortholog is 100%.

Group of orthologs #439. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:430 P.ramorum:430

H3AT53              	100.00%		H3G5Z0              	100.00%
Bootstrap support for H3AT53 as seed ortholog is 100%.
Bootstrap support for H3G5Z0 as seed ortholog is 100%.

Group of orthologs #440. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.ramorum:428

H3A2G3              	100.00%		H3G957              	100.00%
Bootstrap support for H3A2G3 as seed ortholog is 100%.
Bootstrap support for H3G957 as seed ortholog is 100%.

Group of orthologs #441. Best score 427 bits
Score difference with first non-orthologous sequence - L.chalumnae:427 P.ramorum:427

H3APA8              	100.00%		H3GTV1              	100.00%
Bootstrap support for H3APA8 as seed ortholog is 100%.
Bootstrap support for H3GTV1 as seed ortholog is 100%.

Group of orthologs #442. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:426 P.ramorum:426

H2ZVF2              	100.00%		H3G7L5              	100.00%
Bootstrap support for H2ZVF2 as seed ortholog is 100%.
Bootstrap support for H3G7L5 as seed ortholog is 100%.

Group of orthologs #443. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.ramorum:100

H2ZTL2              	100.00%		H3GAA2              	100.00%
Bootstrap support for H2ZTL2 as seed ortholog is 100%.
Bootstrap support for H3GAA2 as seed ortholog is 98%.

Group of orthologs #444. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:426 P.ramorum:426

H2ZZ55              	100.00%		H3GA73              	100.00%
Bootstrap support for H2ZZ55 as seed ortholog is 100%.
Bootstrap support for H3GA73 as seed ortholog is 100%.

Group of orthologs #445. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:426 P.ramorum:426

H3A171              	100.00%		H3G9P3              	100.00%
Bootstrap support for H3A171 as seed ortholog is 100%.
Bootstrap support for H3G9P3 as seed ortholog is 100%.

Group of orthologs #446. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:42

H3A4B4              	100.00%		H3H673              	100.00%
H3AGU5              	59.18%		H3H803              	15.42%
H3ACW4              	21.63%		H3H6R7              	12.86%
Bootstrap support for H3A4B4 as seed ortholog is 99%.
Bootstrap support for H3H673 as seed ortholog is 72%.
Alternative seed ortholog is H3GCV8 (42 bits away from this cluster)

Group of orthologs #447. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:425

H3B425              	100.00%		H3GG62              	100.00%
H3ADX0              	41.26%		
H3B1T5              	5.01%		
Bootstrap support for H3B425 as seed ortholog is 99%.
Bootstrap support for H3GG62 as seed ortholog is 100%.

Group of orthologs #448. Best score 423 bits
Score difference with first non-orthologous sequence - L.chalumnae:423 P.ramorum:423

H3AP99              	100.00%		H3GJD1              	100.00%
Bootstrap support for H3AP99 as seed ortholog is 100%.
Bootstrap support for H3GJD1 as seed ortholog is 100%.

Group of orthologs #449. Best score 421 bits
Score difference with first non-orthologous sequence - L.chalumnae:421 P.ramorum:163

H2ZZ12              	100.00%		H3GAC3              	100.00%
Bootstrap support for H2ZZ12 as seed ortholog is 100%.
Bootstrap support for H3GAC3 as seed ortholog is 99%.

Group of orthologs #450. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:419 P.ramorum:292

H2ZSB7              	100.00%		H3GAT3              	100.00%
Bootstrap support for H2ZSB7 as seed ortholog is 100%.
Bootstrap support for H3GAT3 as seed ortholog is 100%.

Group of orthologs #451. Best score 418 bits
Score difference with first non-orthologous sequence - L.chalumnae:418 P.ramorum:361

H3A1U1              	100.00%		H3GA67              	100.00%
Bootstrap support for H3A1U1 as seed ortholog is 100%.
Bootstrap support for H3GA67 as seed ortholog is 100%.

Group of orthologs #452. Best score 418 bits
Score difference with first non-orthologous sequence - L.chalumnae:418 P.ramorum:418

H3AZJ0              	100.00%		H3G7Z2              	100.00%
Bootstrap support for H3AZJ0 as seed ortholog is 100%.
Bootstrap support for H3G7Z2 as seed ortholog is 100%.

Group of orthologs #453. Best score 418 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.ramorum:329

H3B2K6              	100.00%		H3GIL8              	100.00%
Bootstrap support for H3B2K6 as seed ortholog is 100%.
Bootstrap support for H3GIL8 as seed ortholog is 100%.

Group of orthologs #454. Best score 417 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.ramorum:417

H3B073              	100.00%		H3G857              	100.00%
Bootstrap support for H3B073 as seed ortholog is 100%.
Bootstrap support for H3G857 as seed ortholog is 100%.

Group of orthologs #455. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.ramorum:139

H3AGE6              	100.00%		H3GD15              	100.00%
Bootstrap support for H3AGE6 as seed ortholog is 100%.
Bootstrap support for H3GD15 as seed ortholog is 99%.

Group of orthologs #456. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:415 P.ramorum:415

H3BFW1              	100.00%		H3GAL8              	100.00%
H2ZWZ9              	9.70%		H3G6U6              	51.94%
Bootstrap support for H3BFW1 as seed ortholog is 100%.
Bootstrap support for H3GAL8 as seed ortholog is 100%.

Group of orthologs #457. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.ramorum:415

H3ARV6              	100.00%		H3G9H5              	100.00%
                    	       		H3GQ69              	100.00%
Bootstrap support for H3ARV6 as seed ortholog is 100%.
Bootstrap support for H3G9H5 as seed ortholog is 100%.
Bootstrap support for H3GQ69 as seed ortholog is 100%.

Group of orthologs #458. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:415 P.ramorum:362

H2ZXI1              	100.00%		H3G787              	100.00%
Bootstrap support for H2ZXI1 as seed ortholog is 100%.
Bootstrap support for H3G787 as seed ortholog is 100%.

Group of orthologs #459. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:73

H3ABN5              	100.00%		H3G7F5              	100.00%
Bootstrap support for H3ABN5 as seed ortholog is 99%.
Bootstrap support for H3G7F5 as seed ortholog is 86%.

Group of orthologs #460. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:412 P.ramorum:412

H3BGZ0              	100.00%		H3G8B8              	100.00%
Bootstrap support for H3BGZ0 as seed ortholog is 100%.
Bootstrap support for H3G8B8 as seed ortholog is 100%.

Group of orthologs #461. Best score 411 bits
Score difference with first non-orthologous sequence - L.chalumnae:411 P.ramorum:411

H3ALS6              	100.00%		H3G783              	100.00%
H3AJY7              	14.87%		
Bootstrap support for H3ALS6 as seed ortholog is 100%.
Bootstrap support for H3G783 as seed ortholog is 100%.

Group of orthologs #462. Best score 411 bits
Score difference with first non-orthologous sequence - L.chalumnae:411 P.ramorum:411

H3A9R2              	100.00%		H3GHB8              	100.00%
Bootstrap support for H3A9R2 as seed ortholog is 100%.
Bootstrap support for H3GHB8 as seed ortholog is 100%.

Group of orthologs #463. Best score 411 bits
Score difference with first non-orthologous sequence - L.chalumnae:411 P.ramorum:103

H3AQV5              	100.00%		H3GEF1              	100.00%
Bootstrap support for H3AQV5 as seed ortholog is 100%.
Bootstrap support for H3GEF1 as seed ortholog is 90%.

Group of orthologs #464. Best score 411 bits
Score difference with first non-orthologous sequence - L.chalumnae:411 P.ramorum:411

H3AQ44              	100.00%		H3HC45              	100.00%
Bootstrap support for H3AQ44 as seed ortholog is 100%.
Bootstrap support for H3HC45 as seed ortholog is 100%.

Group of orthologs #465. Best score 410 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:410

H3AUQ8              	100.00%		H3G9R5              	100.00%
H3ALJ9              	20.35%		
H3AWU5              	12.63%		
Bootstrap support for H3AUQ8 as seed ortholog is 99%.
Bootstrap support for H3G9R5 as seed ortholog is 100%.

Group of orthologs #466. Best score 409 bits
Score difference with first non-orthologous sequence - L.chalumnae:409 P.ramorum:409

H3AS50              	100.00%		H3GQQ0              	100.00%
H3AGE7              	42.42%		H3G794              	7.37%
Bootstrap support for H3AS50 as seed ortholog is 100%.
Bootstrap support for H3GQQ0 as seed ortholog is 100%.

Group of orthologs #467. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.ramorum:266

H3AL16              	100.00%		H3G8S2              	100.00%
H3AR27              	81.63%		
H3ADX1              	70.41%		
H3BB87              	18.37%		
Bootstrap support for H3AL16 as seed ortholog is 100%.
Bootstrap support for H3G8S2 as seed ortholog is 100%.

Group of orthologs #468. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 P.ramorum:178

H3AW43              	100.00%		H3GYF7              	100.00%
Bootstrap support for H3AW43 as seed ortholog is 100%.
Bootstrap support for H3GYF7 as seed ortholog is 99%.

Group of orthologs #469. Best score 407 bits
Score difference with first non-orthologous sequence - L.chalumnae:407 P.ramorum:231

H2ZRU1              	100.00%		H3HD78              	100.00%
Bootstrap support for H2ZRU1 as seed ortholog is 100%.
Bootstrap support for H3HD78 as seed ortholog is 100%.

Group of orthologs #470. Best score 407 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 P.ramorum:309

H3BB10              	100.00%		H3G847              	100.00%
Bootstrap support for H3BB10 as seed ortholog is 100%.
Bootstrap support for H3G847 as seed ortholog is 100%.

Group of orthologs #471. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:290

H3BEA4              	100.00%		H3GGA9              	100.00%
                    	       		H3GQX4              	7.22%
Bootstrap support for H3BEA4 as seed ortholog is 99%.
Bootstrap support for H3GGA9 as seed ortholog is 100%.

Group of orthologs #472. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:406 P.ramorum:406

H3BC27              	100.00%		H3GYV5              	100.00%
                    	       		H3GYW6              	16.64%
Bootstrap support for H3BC27 as seed ortholog is 100%.
Bootstrap support for H3GYV5 as seed ortholog is 100%.

Group of orthologs #473. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.ramorum:156

H2ZZ30              	100.00%		H3GA03              	100.00%
Bootstrap support for H2ZZ30 as seed ortholog is 33%.
Alternative seed ortholog is H3BBT8 (18 bits away from this cluster)
Bootstrap support for H3GA03 as seed ortholog is 99%.

Group of orthologs #474. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:406 P.ramorum:406

H3B4E4              	100.00%		H3G9X4              	100.00%
Bootstrap support for H3B4E4 as seed ortholog is 100%.
Bootstrap support for H3G9X4 as seed ortholog is 100%.

Group of orthologs #475. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:406 P.ramorum:406

H3AS92              	100.00%		H3HCI0              	100.00%
Bootstrap support for H3AS92 as seed ortholog is 100%.
Bootstrap support for H3HCI0 as seed ortholog is 100%.

Group of orthologs #476. Best score 405 bits
Score difference with first non-orthologous sequence - L.chalumnae:405 P.ramorum:405

H3AI66              	100.00%		H3GPE0              	100.00%
Bootstrap support for H3AI66 as seed ortholog is 100%.
Bootstrap support for H3GPE0 as seed ortholog is 100%.

Group of orthologs #477. Best score 405 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:294

H3BFN2              	100.00%		H3H2U3              	100.00%
Bootstrap support for H3BFN2 as seed ortholog is 100%.
Bootstrap support for H3H2U3 as seed ortholog is 100%.

Group of orthologs #478. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.ramorum:163

H3AEX7              	100.00%		H3G8X2              	100.00%
Bootstrap support for H3AEX7 as seed ortholog is 100%.
Bootstrap support for H3G8X2 as seed ortholog is 99%.

Group of orthologs #479. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.ramorum:404

H3AYH0              	100.00%		H3GDK0              	100.00%
Bootstrap support for H3AYH0 as seed ortholog is 100%.
Bootstrap support for H3GDK0 as seed ortholog is 100%.

Group of orthologs #480. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.ramorum:404

H3AV17              	100.00%		H3GI10              	100.00%
Bootstrap support for H3AV17 as seed ortholog is 100%.
Bootstrap support for H3GI10 as seed ortholog is 100%.

Group of orthologs #481. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.ramorum:404

H3ALU3              	100.00%		H3GQY6              	100.00%
Bootstrap support for H3ALU3 as seed ortholog is 100%.
Bootstrap support for H3GQY6 as seed ortholog is 100%.

Group of orthologs #482. Best score 403 bits
Score difference with first non-orthologous sequence - L.chalumnae:403 P.ramorum:403

H3A4P7              	100.00%		H3G5W3              	100.00%
Bootstrap support for H3A4P7 as seed ortholog is 100%.
Bootstrap support for H3G5W3 as seed ortholog is 100%.

Group of orthologs #483. Best score 403 bits
Score difference with first non-orthologous sequence - L.chalumnae:403 P.ramorum:403

H3ASD1              	100.00%		H3G590              	100.00%
Bootstrap support for H3ASD1 as seed ortholog is 100%.
Bootstrap support for H3G590 as seed ortholog is 100%.

Group of orthologs #484. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:402 P.ramorum:269

H3B343              	100.00%		H3G5K2              	100.00%
H3BHN0              	45.14%		
Bootstrap support for H3B343 as seed ortholog is 100%.
Bootstrap support for H3G5K2 as seed ortholog is 100%.

Group of orthologs #485. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:402

H3A621              	100.00%		H3G570              	100.00%
Bootstrap support for H3A621 as seed ortholog is 100%.
Bootstrap support for H3G570 as seed ortholog is 100%.

Group of orthologs #486. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.ramorum:402

H3AZL8              	100.00%		H3G7L2              	100.00%
Bootstrap support for H3AZL8 as seed ortholog is 100%.
Bootstrap support for H3G7L2 as seed ortholog is 100%.

Group of orthologs #487. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.ramorum:314

H3BIP7              	100.00%		H3G9J9              	100.00%
H3B4Y1              	36.84%		
H3AFN0              	27.30%		
H3ACW6              	26.64%		
Bootstrap support for H3BIP7 as seed ortholog is 100%.
Bootstrap support for H3G9J9 as seed ortholog is 100%.

Group of orthologs #488. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 P.ramorum:64

H3A9Y8              	100.00%		H3H3X5              	100.00%
Bootstrap support for H3A9Y8 as seed ortholog is 100%.
Bootstrap support for H3H3X5 as seed ortholog is 91%.

Group of orthologs #489. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.ramorum:213

H3AB20              	100.00%		H3GG09              	100.00%
Bootstrap support for H3AB20 as seed ortholog is 100%.
Bootstrap support for H3GG09 as seed ortholog is 100%.

Group of orthologs #490. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:400 P.ramorum:400

H3B8L9              	100.00%		H3GWU9              	100.00%
Bootstrap support for H3B8L9 as seed ortholog is 100%.
Bootstrap support for H3GWU9 as seed ortholog is 100%.

Group of orthologs #491. Best score 399 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:158

H3B1E5              	100.00%		H3G8V8              	100.00%
Bootstrap support for H3B1E5 as seed ortholog is 99%.
Bootstrap support for H3G8V8 as seed ortholog is 99%.

Group of orthologs #492. Best score 398 bits
Score difference with first non-orthologous sequence - L.chalumnae:398 P.ramorum:40

H3ATJ8              	100.00%		H3GAP1              	100.00%
H3AAG4              	60.56%		H3GAQ6              	86.43%
                    	       		H3H2B2              	75.18%
                    	       		H3GAQ9              	74.82%
                    	       		H3H2B4              	74.82%
                    	       		H3G6W1              	16.43%
Bootstrap support for H3ATJ8 as seed ortholog is 100%.
Bootstrap support for H3GAP1 as seed ortholog is 82%.

Group of orthologs #493. Best score 398 bits
Score difference with first non-orthologous sequence - L.chalumnae:398 P.ramorum:398

H3B1Y6              	100.00%		H3GHW1              	100.00%
Bootstrap support for H3B1Y6 as seed ortholog is 100%.
Bootstrap support for H3GHW1 as seed ortholog is 100%.

Group of orthologs #494. Best score 397 bits
Score difference with first non-orthologous sequence - L.chalumnae:397 P.ramorum:397

H3A1P7              	100.00%		H3G6I4              	100.00%
                    	       		H3H5Y3              	42.49%
Bootstrap support for H3A1P7 as seed ortholog is 100%.
Bootstrap support for H3G6I4 as seed ortholog is 100%.

Group of orthologs #495. Best score 397 bits
Score difference with first non-orthologous sequence - L.chalumnae:397 P.ramorum:397

H3AZH8              	100.00%		H3G949              	100.00%
Bootstrap support for H3AZH8 as seed ortholog is 100%.
Bootstrap support for H3G949 as seed ortholog is 100%.

Group of orthologs #496. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:396 P.ramorum:396

H3AWN2              	100.00%		H3GE72              	100.00%
H3AHZ5              	22.03%		H3G5Y2              	47.09%
H3AQQ3              	19.77%		H3G5Y1              	12.76%
H3BGM2              	5.37%		H3GXA7              	12.64%
Bootstrap support for H3AWN2 as seed ortholog is 100%.
Bootstrap support for H3GE72 as seed ortholog is 100%.

Group of orthologs #497. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:396 P.ramorum:310

H2ZZA0              	100.00%		H3GAJ0              	100.00%
H3ATR1              	54.07%		
H3B379              	37.13%		
Bootstrap support for H2ZZA0 as seed ortholog is 100%.
Bootstrap support for H3GAJ0 as seed ortholog is 100%.

Group of orthologs #498. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:396 P.ramorum:319

H3AW53              	100.00%		H3GBK8              	100.00%
Bootstrap support for H3AW53 as seed ortholog is 100%.
Bootstrap support for H3GBK8 as seed ortholog is 100%.

Group of orthologs #499. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:141

H2ZZA6              	100.00%		H3G8E1              	100.00%
Bootstrap support for H2ZZA6 as seed ortholog is 100%.
Bootstrap support for H3G8E1 as seed ortholog is 99%.

Group of orthologs #500. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:395 P.ramorum:250

H2ZW28              	100.00%		H3GVK0              	100.00%
Bootstrap support for H2ZW28 as seed ortholog is 100%.
Bootstrap support for H3GVK0 as seed ortholog is 99%.

Group of orthologs #501. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:395 P.ramorum:395

H3BA04              	100.00%		H3H301              	100.00%
Bootstrap support for H3BA04 as seed ortholog is 100%.
Bootstrap support for H3H301 as seed ortholog is 100%.

Group of orthologs #502. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:394

H2ZVH7              	100.00%		H3G9S1              	100.00%
Bootstrap support for H2ZVH7 as seed ortholog is 99%.
Bootstrap support for H3G9S1 as seed ortholog is 100%.

Group of orthologs #503. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 P.ramorum:394

H2ZWN8              	100.00%		H3GSD7              	100.00%
Bootstrap support for H2ZWN8 as seed ortholog is 100%.
Bootstrap support for H3GSD7 as seed ortholog is 100%.

Group of orthologs #504. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 P.ramorum:394

H3ACN5              	100.00%		H3H1K7              	100.00%
Bootstrap support for H3ACN5 as seed ortholog is 100%.
Bootstrap support for H3H1K7 as seed ortholog is 100%.

Group of orthologs #505. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.ramorum:393

H3BFA5              	100.00%		H3GJS1              	100.00%
H3AEE9              	42.65%		
H3BHF1              	37.75%		
Bootstrap support for H3BFA5 as seed ortholog is 100%.
Bootstrap support for H3GJS1 as seed ortholog is 100%.

Group of orthologs #506. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.ramorum:393

H3ABS4              	100.00%		H3G9W9              	100.00%
Bootstrap support for H3ABS4 as seed ortholog is 100%.
Bootstrap support for H3G9W9 as seed ortholog is 100%.

Group of orthologs #507. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.ramorum:393

H3BDT3              	100.00%		H3G6P3              	100.00%
Bootstrap support for H3BDT3 as seed ortholog is 100%.
Bootstrap support for H3G6P3 as seed ortholog is 100%.

Group of orthologs #508. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.ramorum:393

H3BDK8              	100.00%		H3G972              	100.00%
Bootstrap support for H3BDK8 as seed ortholog is 100%.
Bootstrap support for H3G972 as seed ortholog is 100%.

Group of orthologs #509. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 P.ramorum:392

H2ZS88              	100.00%		H3GUH2              	100.00%
Bootstrap support for H2ZS88 as seed ortholog is 100%.
Bootstrap support for H3GUH2 as seed ortholog is 100%.

Group of orthologs #510. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 P.ramorum:392

H3ASY8              	100.00%		H3GA48              	100.00%
Bootstrap support for H3ASY8 as seed ortholog is 100%.
Bootstrap support for H3GA48 as seed ortholog is 100%.

Group of orthologs #511. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 P.ramorum:392

H3BEB0              	100.00%		H3G7F3              	100.00%
Bootstrap support for H3BEB0 as seed ortholog is 100%.
Bootstrap support for H3G7F3 as seed ortholog is 100%.

Group of orthologs #512. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 P.ramorum:392

H3AQD0              	100.00%		H3HCQ5              	100.00%
Bootstrap support for H3AQD0 as seed ortholog is 100%.
Bootstrap support for H3HCQ5 as seed ortholog is 100%.

Group of orthologs #513. Best score 391 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.ramorum:272

H3AYP5              	100.00%		H3G7T8              	100.00%
Bootstrap support for H3AYP5 as seed ortholog is 100%.
Bootstrap support for H3G7T8 as seed ortholog is 100%.

Group of orthologs #514. Best score 391 bits
Score difference with first non-orthologous sequence - L.chalumnae:391 P.ramorum:391

H3A998              	100.00%		H3GWU2              	100.00%
Bootstrap support for H3A998 as seed ortholog is 100%.
Bootstrap support for H3GWU2 as seed ortholog is 100%.

Group of orthologs #515. Best score 390 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.ramorum:41

H3BI57              	100.00%		H3G8Q7              	100.00%
H3AGI8              	35.78%		
M3XH50              	5.05%		
Bootstrap support for H3BI57 as seed ortholog is 80%.
Bootstrap support for H3G8Q7 as seed ortholog is 91%.

Group of orthologs #516. Best score 390 bits
Score difference with first non-orthologous sequence - L.chalumnae:390 P.ramorum:390

H3A547              	100.00%		H3G9L7              	100.00%
Bootstrap support for H3A547 as seed ortholog is 100%.
Bootstrap support for H3G9L7 as seed ortholog is 100%.

Group of orthologs #517. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.ramorum:207

M3XKL9              	100.00%		H3GGN6              	100.00%
H3BEY4              	8.68%		H3H2B5              	57.40%
                    	       		H3GGN3              	49.83%
                    	       		H3H2B7              	49.39%
                    	       		H3H2C0              	38.41%
                    	       		H3H2B8              	33.10%
                    	       		H3GBG4              	19.08%
Bootstrap support for M3XKL9 as seed ortholog is 99%.
Bootstrap support for H3GGN6 as seed ortholog is 99%.

Group of orthologs #518. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 P.ramorum:116

H3BD47              	100.00%		H3GEF2              	100.00%
H3AK21              	56.95%		
H3BI35              	15.44%		
H3B4L6              	14.24%		
H3ABL0              	6.26%		
Bootstrap support for H3BD47 as seed ortholog is 100%.
Bootstrap support for H3GEF2 as seed ortholog is 97%.

Group of orthologs #519. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 P.ramorum:389

H3ASR5              	100.00%		H3G8J3              	100.00%
H3B3Y5              	58.91%		
H3AMF7              	31.68%		
H3AW92              	30.94%		
Bootstrap support for H3ASR5 as seed ortholog is 100%.
Bootstrap support for H3G8J3 as seed ortholog is 100%.

Group of orthologs #520. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:282

H3AXH7              	100.00%		H3G4X2              	100.00%
H3AGW0              	28.85%		
H3B9K5              	26.91%		
Bootstrap support for H3AXH7 as seed ortholog is 99%.
Bootstrap support for H3G4X2 as seed ortholog is 100%.

Group of orthologs #521. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:82

H3BCL8              	100.00%		H3G775              	100.00%
                    	       		H3G697              	5.48%
                    	       		H3G698              	5.10%
Bootstrap support for H3BCL8 as seed ortholog is 98%.
Bootstrap support for H3G775 as seed ortholog is 96%.

Group of orthologs #522. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:79

H2ZSK2              	100.00%		H3G602              	100.00%
M3XK31              	11.45%		
Bootstrap support for H2ZSK2 as seed ortholog is 87%.
Bootstrap support for H3G602 as seed ortholog is 99%.

Group of orthologs #523. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 P.ramorum:389

H2ZSR5              	100.00%		H3GP21              	100.00%
H3AKF9              	8.48%		
Bootstrap support for H2ZSR5 as seed ortholog is 100%.
Bootstrap support for H3GP21 as seed ortholog is 100%.

Group of orthologs #524. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:389

H3BBZ5              	100.00%		H3GER8              	100.00%
Bootstrap support for H3BBZ5 as seed ortholog is 100%.
Bootstrap support for H3GER8 as seed ortholog is 100%.

Group of orthologs #525. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.ramorum:388

H3BA52              	100.00%		H3H283              	100.00%
H2ZVE2              	34.15%		
Bootstrap support for H3BA52 as seed ortholog is 100%.
Bootstrap support for H3H283 as seed ortholog is 100%.

Group of orthologs #526. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.ramorum:388

H3A4A4              	100.00%		H3G7Y3              	100.00%
Bootstrap support for H3A4A4 as seed ortholog is 100%.
Bootstrap support for H3G7Y3 as seed ortholog is 100%.

Group of orthologs #527. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.ramorum:388

H3A8U4              	100.00%		H3G7X1              	100.00%
Bootstrap support for H3A8U4 as seed ortholog is 100%.
Bootstrap support for H3G7X1 as seed ortholog is 100%.

Group of orthologs #528. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:192

H3AX40              	100.00%		H3G669              	100.00%
Bootstrap support for H3AX40 as seed ortholog is 99%.
Bootstrap support for H3G669 as seed ortholog is 100%.

Group of orthologs #529. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:388

H3BDV5              	100.00%		H3GAA7              	100.00%
Bootstrap support for H3BDV5 as seed ortholog is 100%.
Bootstrap support for H3GAA7 as seed ortholog is 100%.

Group of orthologs #530. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.ramorum:388

H3AMV4              	100.00%		H3H0X1              	100.00%
Bootstrap support for H3AMV4 as seed ortholog is 100%.
Bootstrap support for H3H0X1 as seed ortholog is 100%.

Group of orthologs #531. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.ramorum:388

H3BB41              	100.00%		H3GZB3              	100.00%
Bootstrap support for H3BB41 as seed ortholog is 100%.
Bootstrap support for H3GZB3 as seed ortholog is 100%.

Group of orthologs #532. Best score 387 bits
Score difference with first non-orthologous sequence - L.chalumnae:387 P.ramorum:387

H3BIA5              	100.00%		H3GGX9              	100.00%
Bootstrap support for H3BIA5 as seed ortholog is 100%.
Bootstrap support for H3GGX9 as seed ortholog is 100%.

Group of orthologs #533. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:386

H3B2Q8              	100.00%		H3G7G1              	100.00%
H3ABY5              	54.74%		
H3B3M5              	45.26%		
Bootstrap support for H3B2Q8 as seed ortholog is 91%.
Bootstrap support for H3G7G1 as seed ortholog is 100%.

Group of orthologs #534. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:72

H3AFT1              	100.00%		H3GMZ2              	100.00%
H3BEJ3              	24.14%		
Bootstrap support for H3AFT1 as seed ortholog is 99%.
Bootstrap support for H3GMZ2 as seed ortholog is 99%.

Group of orthologs #535. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 P.ramorum:386

H3ASW1              	100.00%		H3H2J8              	100.00%
H2ZZ89              	42.35%		
Bootstrap support for H3ASW1 as seed ortholog is 100%.
Bootstrap support for H3H2J8 as seed ortholog is 100%.

Group of orthologs #536. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:320

H3AQ52              	100.00%		H3GAK1              	100.00%
Bootstrap support for H3AQ52 as seed ortholog is 99%.
Bootstrap support for H3GAK1 as seed ortholog is 100%.

Group of orthologs #537. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 P.ramorum:386

H3AA65              	100.00%		H3GVK7              	100.00%
Bootstrap support for H3AA65 as seed ortholog is 100%.
Bootstrap support for H3GVK7 as seed ortholog is 100%.

Group of orthologs #538. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 P.ramorum:386

H3BAA1              	100.00%		H3G883              	100.00%
Bootstrap support for H3BAA1 as seed ortholog is 100%.
Bootstrap support for H3G883 as seed ortholog is 100%.

Group of orthologs #539. Best score 385 bits
Score difference with first non-orthologous sequence - L.chalumnae:385 P.ramorum:385

H3AHH4              	100.00%		H3H1H3              	100.00%
Bootstrap support for H3AHH4 as seed ortholog is 100%.
Bootstrap support for H3H1H3 as seed ortholog is 100%.

Group of orthologs #540. Best score 384 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:167

H3ARL4              	100.00%		H3H2U2              	100.00%
Bootstrap support for H3ARL4 as seed ortholog is 99%.
Bootstrap support for H3H2U2 as seed ortholog is 99%.

Group of orthologs #541. Best score 384 bits
Score difference with first non-orthologous sequence - L.chalumnae:384 P.ramorum:384

H3BBN8              	100.00%		H3GY05              	100.00%
Bootstrap support for H3BBN8 as seed ortholog is 100%.
Bootstrap support for H3GY05 as seed ortholog is 100%.

Group of orthologs #542. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:383 P.ramorum:383

H3AM64              	100.00%		H3GBN6              	100.00%
H3B2U0              	100.00%		
H3APZ1              	63.39%		
Bootstrap support for H3AM64 as seed ortholog is 100%.
Bootstrap support for H3B2U0 as seed ortholog is 100%.
Bootstrap support for H3GBN6 as seed ortholog is 100%.

Group of orthologs #543. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:200

H3A399              	100.00%		H3G8N1              	100.00%
H3ACS8              	23.03%		
Bootstrap support for H3A399 as seed ortholog is 99%.
Bootstrap support for H3G8N1 as seed ortholog is 100%.

Group of orthologs #544. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:383 P.ramorum:383

H3ADS0              	100.00%		H3G836              	100.00%
Bootstrap support for H3ADS0 as seed ortholog is 100%.
Bootstrap support for H3G836 as seed ortholog is 100%.

Group of orthologs #545. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:383 P.ramorum:314

H3APX4              	100.00%		H3G7P3              	100.00%
Bootstrap support for H3APX4 as seed ortholog is 100%.
Bootstrap support for H3G7P3 as seed ortholog is 100%.

Group of orthologs #546. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:383 P.ramorum:383

H3AB58              	100.00%		H3GL60              	100.00%
Bootstrap support for H3AB58 as seed ortholog is 100%.
Bootstrap support for H3GL60 as seed ortholog is 100%.

Group of orthologs #547. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:383 P.ramorum:383

H3BA46              	100.00%		H3G6H1              	100.00%
Bootstrap support for H3BA46 as seed ortholog is 100%.
Bootstrap support for H3G6H1 as seed ortholog is 100%.

Group of orthologs #548. Best score 382 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.ramorum:382

H3B7X9              	100.00%		H3G7N7              	100.00%
Bootstrap support for H3B7X9 as seed ortholog is 100%.
Bootstrap support for H3G7N7 as seed ortholog is 100%.

Group of orthologs #549. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.ramorum:91

H3B947              	100.00%		H3GAB6              	100.00%
H2ZV04              	12.42%		
H3B4Y9              	5.80%		
Bootstrap support for H3B947 as seed ortholog is 100%.
Bootstrap support for H3GAB6 as seed ortholog is 99%.

Group of orthologs #550. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:381 P.ramorum:381

H3ADY5              	100.00%		H3G5Z6              	100.00%
Bootstrap support for H3ADY5 as seed ortholog is 100%.
Bootstrap support for H3G5Z6 as seed ortholog is 100%.

Group of orthologs #551. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:381 P.ramorum:332

H3BA83              	100.00%		H3G7W7              	100.00%
Bootstrap support for H3BA83 as seed ortholog is 100%.
Bootstrap support for H3G7W7 as seed ortholog is 100%.

Group of orthologs #552. Best score 380 bits
Score difference with first non-orthologous sequence - L.chalumnae:380 P.ramorum:240

H3A0Y1              	100.00%		H3G9R9              	100.00%
Bootstrap support for H3A0Y1 as seed ortholog is 100%.
Bootstrap support for H3G9R9 as seed ortholog is 100%.

Group of orthologs #553. Best score 380 bits
Score difference with first non-orthologous sequence - L.chalumnae:380 P.ramorum:380

H3BHP9              	100.00%		H3GTB3              	100.00%
Bootstrap support for H3BHP9 as seed ortholog is 100%.
Bootstrap support for H3GTB3 as seed ortholog is 100%.

Group of orthologs #554. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 P.ramorum:97

H3A823              	100.00%		H3GDL0              	100.00%
H3B804              	7.93%		H3G8B9              	50.00%
                    	       		H3G8B7              	40.88%
Bootstrap support for H3A823 as seed ortholog is 100%.
Bootstrap support for H3GDL0 as seed ortholog is 97%.

Group of orthologs #555. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 P.ramorum:379

H3ACW2              	100.00%		H3GG97              	100.00%
Bootstrap support for H3ACW2 as seed ortholog is 100%.
Bootstrap support for H3GG97 as seed ortholog is 100%.

Group of orthologs #556. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:205

H3BDP3              	100.00%		H3GDL5              	100.00%
Bootstrap support for H3BDP3 as seed ortholog is 99%.
Bootstrap support for H3GDL5 as seed ortholog is 99%.

Group of orthologs #557. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:181

H3BDR0              	100.00%		H3GET1              	100.00%
Bootstrap support for H3BDR0 as seed ortholog is 100%.
Bootstrap support for H3GET1 as seed ortholog is 99%.

Group of orthologs #558. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:378 P.ramorum:144

H2ZYW9              	100.00%		H3G607              	100.00%
                    	       		H3G609              	30.76%
Bootstrap support for H2ZYW9 as seed ortholog is 100%.
Bootstrap support for H3G607 as seed ortholog is 99%.

Group of orthologs #559. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:378

H3ADI2              	100.00%		H3G973              	100.00%
Bootstrap support for H3ADI2 as seed ortholog is 100%.
Bootstrap support for H3G973 as seed ortholog is 100%.

Group of orthologs #560. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.ramorum:378

H3A217              	100.00%		H3HDA1              	100.00%
Bootstrap support for H3A217 as seed ortholog is 100%.
Bootstrap support for H3HDA1 as seed ortholog is 100%.

Group of orthologs #561. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:378 P.ramorum:378

H3BEH5              	100.00%		H3GBY4              	100.00%
Bootstrap support for H3BEH5 as seed ortholog is 100%.
Bootstrap support for H3GBY4 as seed ortholog is 100%.

Group of orthologs #562. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:126

H3ARF4              	100.00%		H3G7Z1              	100.00%
H2ZXD4              	50.83%		
H3ATW7              	50.83%		
Bootstrap support for H3ARF4 as seed ortholog is 99%.
Bootstrap support for H3G7Z1 as seed ortholog is 100%.

Group of orthologs #563. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:377 P.ramorum:377

H3ASU7              	100.00%		H3GZ78              	100.00%
H3B674              	57.59%		
Bootstrap support for H3ASU7 as seed ortholog is 100%.
Bootstrap support for H3GZ78 as seed ortholog is 100%.

Group of orthologs #564. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:377 P.ramorum:377

H3BG48              	100.00%		H3GJ62              	100.00%
                    	       		H3GJ63              	84.66%
Bootstrap support for H3BG48 as seed ortholog is 100%.
Bootstrap support for H3GJ62 as seed ortholog is 100%.

Group of orthologs #565. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 P.ramorum:377

H3BGU9              	100.00%		H3GAF9              	100.00%
Bootstrap support for H3BGU9 as seed ortholog is 100%.
Bootstrap support for H3GAF9 as seed ortholog is 100%.

Group of orthologs #566. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:376

H2ZRX1              	100.00%		H3G9Z7              	100.00%
                    	       		H3G9Z8              	96.49%
Bootstrap support for H2ZRX1 as seed ortholog is 94%.
Bootstrap support for H3G9Z7 as seed ortholog is 100%.

Group of orthologs #567. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:376 P.ramorum:376

H3BB88              	100.00%		H3G9V7              	100.00%
H2ZY28              	38.72%		
Bootstrap support for H3BB88 as seed ortholog is 100%.
Bootstrap support for H3G9V7 as seed ortholog is 100%.

Group of orthologs #568. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:311

H2ZWW5              	100.00%		H3GY16              	100.00%
Bootstrap support for H2ZWW5 as seed ortholog is 99%.
Bootstrap support for H3GY16 as seed ortholog is 100%.

Group of orthologs #569. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:376 P.ramorum:376

H3ALJ5              	100.00%		H3GTM3              	100.00%
Bootstrap support for H3ALJ5 as seed ortholog is 100%.
Bootstrap support for H3GTM3 as seed ortholog is 100%.

Group of orthologs #570. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:376

H3ASK7              	100.00%		H3HB77              	100.00%
Bootstrap support for H3ASK7 as seed ortholog is 99%.
Bootstrap support for H3HB77 as seed ortholog is 100%.

Group of orthologs #571. Best score 375 bits
Score difference with first non-orthologous sequence - L.chalumnae:375 P.ramorum:375

H3A0A5              	100.00%		H3GMC4              	100.00%
Bootstrap support for H3A0A5 as seed ortholog is 100%.
Bootstrap support for H3GMC4 as seed ortholog is 100%.

Group of orthologs #572. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.ramorum:374

H3A9S5              	100.00%		H3GT38              	100.00%
                    	       		H3HCZ3              	55.54%
Bootstrap support for H3A9S5 as seed ortholog is 100%.
Bootstrap support for H3GT38 as seed ortholog is 100%.

Group of orthologs #573. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.ramorum:374

H3ACK3              	100.00%		H3G565              	100.00%
Bootstrap support for H3ACK3 as seed ortholog is 100%.
Bootstrap support for H3G565 as seed ortholog is 100%.

Group of orthologs #574. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:223

H3BF83              	100.00%		H3G758              	100.00%
Bootstrap support for H3BF83 as seed ortholog is 73%.
Alternative seed ortholog is H3B8S4 (29 bits away from this cluster)
Bootstrap support for H3G758 as seed ortholog is 100%.

Group of orthologs #575. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.ramorum:373

H3AKL3              	100.00%		H3GIL6              	100.00%
                    	       		H3G8H2              	74.11%
Bootstrap support for H3AKL3 as seed ortholog is 100%.
Bootstrap support for H3GIL6 as seed ortholog is 100%.

Group of orthologs #576. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.ramorum:296

H3AT29              	100.00%		H3GUK7              	100.00%
Bootstrap support for H3AT29 as seed ortholog is 100%.
Bootstrap support for H3GUK7 as seed ortholog is 100%.

Group of orthologs #577. Best score 372 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.ramorum:372

H3AFW6              	100.00%		H3GAM5              	100.00%
Bootstrap support for H3AFW6 as seed ortholog is 99%.
Bootstrap support for H3GAM5 as seed ortholog is 100%.

Group of orthologs #578. Best score 372 bits
Score difference with first non-orthologous sequence - L.chalumnae:372 P.ramorum:372

H3AIR8              	100.00%		H3GMN5              	100.00%
Bootstrap support for H3AIR8 as seed ortholog is 100%.
Bootstrap support for H3GMN5 as seed ortholog is 100%.

Group of orthologs #579. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 P.ramorum:371

H3AKV5              	100.00%		H3G8W6              	100.00%
Bootstrap support for H3AKV5 as seed ortholog is 100%.
Bootstrap support for H3G8W6 as seed ortholog is 100%.

Group of orthologs #580. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:81

H3AZY4              	100.00%		H3GZT4              	100.00%
Bootstrap support for H3AZY4 as seed ortholog is 98%.
Bootstrap support for H3GZT4 as seed ortholog is 95%.

Group of orthologs #581. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.ramorum:370

H3AY70              	100.00%		H3GC35              	100.00%
                    	       		H3H1M2              	43.37%
Bootstrap support for H3AY70 as seed ortholog is 100%.
Bootstrap support for H3GC35 as seed ortholog is 100%.

Group of orthologs #582. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:370

H3B7A9              	100.00%		H3G9C6              	100.00%
Bootstrap support for H3B7A9 as seed ortholog is 99%.
Bootstrap support for H3G9C6 as seed ortholog is 100%.

Group of orthologs #583. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.ramorum:370

H3BBL3              	100.00%		H3G8T3              	100.00%
Bootstrap support for H3BBL3 as seed ortholog is 100%.
Bootstrap support for H3G8T3 as seed ortholog is 100%.

Group of orthologs #584. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.ramorum:370

H3B1T6              	100.00%		H3GKY3              	100.00%
Bootstrap support for H3B1T6 as seed ortholog is 100%.
Bootstrap support for H3GKY3 as seed ortholog is 100%.

Group of orthologs #585. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:273

H3B284              	100.00%		H3HBJ6              	100.00%
H3AJH4              	100.00%		H3H7R1              	100.00%
Bootstrap support for H3B284 as seed ortholog is 95%.
Bootstrap support for H3AJH4 as seed ortholog is 54%.
Alternative seed ortholog is H3ASL0 (78 bits away from this cluster)
Bootstrap support for H3HBJ6 as seed ortholog is 100%.
Bootstrap support for H3H7R1 as seed ortholog is 100%.

Group of orthologs #586. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.ramorum:369

H3AZL7              	100.00%		H3G6M0              	100.00%
Bootstrap support for H3AZL7 as seed ortholog is 100%.
Bootstrap support for H3G6M0 as seed ortholog is 100%.

Group of orthologs #587. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.ramorum:197

H2ZWS9              	100.00%		H3GAT4              	100.00%
Bootstrap support for H2ZWS9 as seed ortholog is 100%.
Bootstrap support for H3GAT4 as seed ortholog is 99%.

Group of orthologs #588. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:87

H3B1U6              	100.00%		H3GG23              	100.00%
H2ZVH9              	58.76%		B9VTN8              	12.73%
Bootstrap support for H3B1U6 as seed ortholog is 92%.
Bootstrap support for H3GG23 as seed ortholog is 99%.

Group of orthologs #589. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:178

H3AFV9              	100.00%		H3H7S1              	100.00%
H3ARG2              	68.77%		H3H546              	34.82%
Bootstrap support for H3AFV9 as seed ortholog is 99%.
Bootstrap support for H3H7S1 as seed ortholog is 99%.

Group of orthologs #590. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.ramorum:367

H3BI08              	100.00%		H3G6Y6              	100.00%
Bootstrap support for H3BI08 as seed ortholog is 100%.
Bootstrap support for H3G6Y6 as seed ortholog is 100%.

Group of orthologs #591. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.ramorum:79

H3AFV5              	100.00%		H3H170              	100.00%
H3AVS9              	55.31%		
Bootstrap support for H3AFV5 as seed ortholog is 99%.
Bootstrap support for H3H170 as seed ortholog is 89%.

Group of orthologs #592. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.ramorum:238

H3BH10              	100.00%		H3G791              	100.00%
H3BDW2              	18.33%		
Bootstrap support for H3BH10 as seed ortholog is 100%.
Bootstrap support for H3G791 as seed ortholog is 100%.

Group of orthologs #593. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.ramorum:366

H3ARG3              	100.00%		H3G8Y4              	100.00%
Bootstrap support for H3ARG3 as seed ortholog is 100%.
Bootstrap support for H3G8Y4 as seed ortholog is 100%.

Group of orthologs #594. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.ramorum:66

H3B0Y8              	100.00%		H3GQ71              	100.00%
Bootstrap support for H3B0Y8 as seed ortholog is 100%.
Bootstrap support for H3GQ71 as seed ortholog is 91%.

Group of orthologs #595. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.ramorum:366

H3B1D6              	100.00%		H3GSD4              	100.00%
Bootstrap support for H3B1D6 as seed ortholog is 100%.
Bootstrap support for H3GSD4 as seed ortholog is 100%.

Group of orthologs #596. Best score 365 bits
Score difference with first non-orthologous sequence - L.chalumnae:365 P.ramorum:365

H3B819              	100.00%		H3GIT6              	100.00%
                    	       		H3GIT7              	45.13%
Bootstrap support for H3B819 as seed ortholog is 100%.
Bootstrap support for H3GIT6 as seed ortholog is 100%.

Group of orthologs #597. Best score 365 bits
Score difference with first non-orthologous sequence - L.chalumnae:365 P.ramorum:365

H3AZP1              	100.00%		H3GIG8              	100.00%
Bootstrap support for H3AZP1 as seed ortholog is 100%.
Bootstrap support for H3GIG8 as seed ortholog is 100%.

Group of orthologs #598. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.ramorum:364

H3A689              	100.00%		H3GEE0              	100.00%
H3A705              	48.87%		
H3B791              	33.01%		
H3AGI6              	16.02%		
H3B3J1              	6.47%		
H3AJG8              	6.15%		
Bootstrap support for H3A689 as seed ortholog is 100%.
Bootstrap support for H3GEE0 as seed ortholog is 100%.

Group of orthologs #599. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.ramorum:364

H3A6A2              	100.00%		H3G894              	100.00%
Bootstrap support for H3A6A2 as seed ortholog is 100%.
Bootstrap support for H3G894 as seed ortholog is 100%.

Group of orthologs #600. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.ramorum:364

H3AGB5              	100.00%		H3GFQ5              	100.00%
Bootstrap support for H3AGB5 as seed ortholog is 100%.
Bootstrap support for H3GFQ5 as seed ortholog is 100%.

Group of orthologs #601. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.ramorum:364

H3ALV8              	100.00%		H3GYJ5              	100.00%
Bootstrap support for H3ALV8 as seed ortholog is 100%.
Bootstrap support for H3GYJ5 as seed ortholog is 100%.

Group of orthologs #602. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.ramorum:364

H3B0A8              	100.00%		H3HCZ8              	100.00%
Bootstrap support for H3B0A8 as seed ortholog is 100%.
Bootstrap support for H3HCZ8 as seed ortholog is 100%.

Group of orthologs #603. Best score 363 bits
Score difference with first non-orthologous sequence - L.chalumnae:363 P.ramorum:363

H3A2Y2              	100.00%		H3GGH2              	100.00%
Bootstrap support for H3A2Y2 as seed ortholog is 100%.
Bootstrap support for H3GGH2 as seed ortholog is 100%.

Group of orthologs #604. Best score 362 bits
Score difference with first non-orthologous sequence - L.chalumnae:362 P.ramorum:362

H2ZSC8              	100.00%		H3GAJ6              	100.00%
H3AA89              	48.60%		
Bootstrap support for H2ZSC8 as seed ortholog is 100%.
Bootstrap support for H3GAJ6 as seed ortholog is 100%.

Group of orthologs #605. Best score 362 bits
Score difference with first non-orthologous sequence - L.chalumnae:362 P.ramorum:362

H3B9E7              	100.00%		H3GWN7              	100.00%
Bootstrap support for H3B9E7 as seed ortholog is 100%.
Bootstrap support for H3GWN7 as seed ortholog is 100%.

Group of orthologs #606. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.ramorum:361

H3A7G4              	100.00%		H3GAJ1              	100.00%
H3AN53              	7.92%		
Bootstrap support for H3A7G4 as seed ortholog is 100%.
Bootstrap support for H3GAJ1 as seed ortholog is 100%.

Group of orthologs #607. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.ramorum:361

H3B2H2              	100.00%		H3GE11              	100.00%
H3AI25              	47.78%		
Bootstrap support for H3B2H2 as seed ortholog is 100%.
Bootstrap support for H3GE11 as seed ortholog is 100%.

Group of orthologs #608. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.ramorum:361

H3AV84              	100.00%		H3GM70              	100.00%
Bootstrap support for H3AV84 as seed ortholog is 100%.
Bootstrap support for H3GM70 as seed ortholog is 100%.

Group of orthologs #609. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:57

H3AXE1              	100.00%		H3G992              	100.00%
H3ADK9              	81.39%		
Bootstrap support for H3AXE1 as seed ortholog is 96%.
Bootstrap support for H3G992 as seed ortholog is 95%.

Group of orthologs #610. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:91

H3BD96              	100.00%		H3G9M8              	100.00%
H3B9J3              	7.17%		
Bootstrap support for H3BD96 as seed ortholog is 99%.
Bootstrap support for H3G9M8 as seed ortholog is 99%.

Group of orthologs #611. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:360 P.ramorum:360

H3B421              	100.00%		H3GG49              	100.00%
Bootstrap support for H3B421 as seed ortholog is 100%.
Bootstrap support for H3GG49 as seed ortholog is 100%.

Group of orthologs #612. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:360 P.ramorum:360

H3AU89              	100.00%		H3H563              	100.00%
Bootstrap support for H3AU89 as seed ortholog is 100%.
Bootstrap support for H3H563 as seed ortholog is 100%.

Group of orthologs #613. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.ramorum:318

H3A2W5              	100.00%		H3G888              	100.00%
                    	       		H3GCH7              	67.60%
                    	       		H3GCH8              	29.11%
Bootstrap support for H3A2W5 as seed ortholog is 100%.
Bootstrap support for H3G888 as seed ortholog is 100%.

Group of orthologs #614. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.ramorum:359

H3B3Q4              	100.00%		H3G947              	100.00%
Bootstrap support for H3B3Q4 as seed ortholog is 100%.
Bootstrap support for H3G947 as seed ortholog is 100%.

Group of orthologs #615. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.ramorum:359

H3ABU7              	100.00%		H3HB33              	100.00%
Bootstrap support for H3ABU7 as seed ortholog is 100%.
Bootstrap support for H3HB33 as seed ortholog is 100%.

Group of orthologs #616. Best score 358 bits
Score difference with first non-orthologous sequence - L.chalumnae:358 P.ramorum:358

H3AKN2              	100.00%		H3H002              	100.00%
                    	       		H3H000              	99.40%
Bootstrap support for H3AKN2 as seed ortholog is 100%.
Bootstrap support for H3H002 as seed ortholog is 100%.

Group of orthologs #617. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.ramorum:357

H3AM32              	100.00%		H3GT40              	100.00%
H2ZS30              	12.83%		
Bootstrap support for H3AM32 as seed ortholog is 100%.
Bootstrap support for H3GT40 as seed ortholog is 100%.

Group of orthologs #618. Best score 356 bits
Score difference with first non-orthologous sequence - L.chalumnae:356 P.ramorum:356

H3A218              	100.00%		H3G9P2              	100.00%
Bootstrap support for H3A218 as seed ortholog is 100%.
Bootstrap support for H3G9P2 as seed ortholog is 100%.

Group of orthologs #619. Best score 353 bits
Score difference with first non-orthologous sequence - L.chalumnae:353 P.ramorum:353

H3AKX9              	100.00%		H3GU32              	100.00%
H3AMU7              	17.42%		
Bootstrap support for H3AKX9 as seed ortholog is 100%.
Bootstrap support for H3GU32 as seed ortholog is 100%.

Group of orthologs #620. Best score 353 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:183

H3AEL6              	100.00%		H3GK30              	100.00%
Bootstrap support for H3AEL6 as seed ortholog is 100%.
Bootstrap support for H3GK30 as seed ortholog is 99%.

Group of orthologs #621. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:283

M3XL86              	100.00%		H3GNZ8              	100.00%
H3A1H5              	38.40%		
Bootstrap support for M3XL86 as seed ortholog is 100%.
Bootstrap support for H3GNZ8 as seed ortholog is 100%.

Group of orthologs #622. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:352 P.ramorum:352

H3AC08              	100.00%		H3G5Q1              	100.00%
Bootstrap support for H3AC08 as seed ortholog is 100%.
Bootstrap support for H3G5Q1 as seed ortholog is 100%.

Group of orthologs #623. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:351 P.ramorum:351

H3BCT6              	100.00%		H3G5C0              	100.00%
Bootstrap support for H3BCT6 as seed ortholog is 100%.
Bootstrap support for H3G5C0 as seed ortholog is 100%.

Group of orthologs #624. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.ramorum:233

H3BBM0              	100.00%		H3G945              	100.00%
Bootstrap support for H3BBM0 as seed ortholog is 100%.
Bootstrap support for H3G945 as seed ortholog is 100%.

Group of orthologs #625. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:173

H3BDU2              	100.00%		H3G939              	100.00%
Bootstrap support for H3BDU2 as seed ortholog is 98%.
Bootstrap support for H3G939 as seed ortholog is 100%.

Group of orthologs #626. Best score 350 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:236

H3BFX6              	100.00%		H3HBD0              	100.00%
H3A3Z0              	12.81%		
H3AIS8              	12.25%		
Bootstrap support for H3BFX6 as seed ortholog is 99%.
Bootstrap support for H3HBD0 as seed ortholog is 100%.

Group of orthologs #627. Best score 350 bits
Score difference with first non-orthologous sequence - L.chalumnae:350 P.ramorum:350

H3A8S5              	100.00%		H3G920              	100.00%
Bootstrap support for H3A8S5 as seed ortholog is 100%.
Bootstrap support for H3G920 as seed ortholog is 100%.

Group of orthologs #628. Best score 350 bits
Score difference with first non-orthologous sequence - L.chalumnae:350 P.ramorum:350

H3AVP9              	100.00%		H3H2P4              	100.00%
Bootstrap support for H3AVP9 as seed ortholog is 100%.
Bootstrap support for H3H2P4 as seed ortholog is 100%.

Group of orthologs #629. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:37

H3AI90              	100.00%		H3GZU5              	100.00%
H3A406              	66.53%		H3H6G7              	85.03%
H3BGB6              	55.39%		
Bootstrap support for H3AI90 as seed ortholog is 99%.
Bootstrap support for H3GZU5 as seed ortholog is 99%.

Group of orthologs #630. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.ramorum:349

H3A9S8              	100.00%		H3G805              	100.00%
Bootstrap support for H3A9S8 as seed ortholog is 100%.
Bootstrap support for H3G805 as seed ortholog is 100%.

Group of orthologs #631. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.ramorum:349

H3B8R6              	100.00%		H3G7S9              	100.00%
Bootstrap support for H3B8R6 as seed ortholog is 100%.
Bootstrap support for H3G7S9 as seed ortholog is 100%.

Group of orthologs #632. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.ramorum:57

H3AZF3              	100.00%		H3HCX9              	100.00%
Bootstrap support for H3AZF3 as seed ortholog is 100%.
Bootstrap support for H3HCX9 as seed ortholog is 95%.

Group of orthologs #633. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.ramorum:347

H3A134              	100.00%		H3GWA8              	100.00%
Bootstrap support for H3A134 as seed ortholog is 100%.
Bootstrap support for H3GWA8 as seed ortholog is 100%.

Group of orthologs #634. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.ramorum:256

H3B664              	100.00%		H3HCG4              	100.00%
Bootstrap support for H3B664 as seed ortholog is 100%.
Bootstrap support for H3HCG4 as seed ortholog is 100%.

Group of orthologs #635. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 P.ramorum:42

H3BC66              	100.00%		H3GKU6              	100.00%
H3BHT4              	53.92%		
H3B1H5              	49.42%		
H3AT49              	47.53%		
Bootstrap support for H3BC66 as seed ortholog is 100%.
Bootstrap support for H3GKU6 as seed ortholog is 87%.

Group of orthologs #636. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 P.ramorum:346

H3AIF6              	100.00%		H3GSX4              	100.00%
Bootstrap support for H3AIF6 as seed ortholog is 100%.
Bootstrap support for H3GSX4 as seed ortholog is 100%.

Group of orthologs #637. Best score 345 bits
Score difference with first non-orthologous sequence - L.chalumnae:345 P.ramorum:345

H3BD09              	100.00%		H3G6G3              	100.00%
H3B049              	26.28%		H3G7P1              	10.05%
Bootstrap support for H3BD09 as seed ortholog is 100%.
Bootstrap support for H3G6G3 as seed ortholog is 100%.

Group of orthologs #638. Best score 345 bits
Score difference with first non-orthologous sequence - L.chalumnae:345 P.ramorum:345

H3AUZ2              	100.00%		H3GZ80              	100.00%
H2ZUK3              	37.90%		
Bootstrap support for H3AUZ2 as seed ortholog is 100%.
Bootstrap support for H3GZ80 as seed ortholog is 100%.

Group of orthologs #639. Best score 345 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:58

H3B6P9              	100.00%		H3G760              	100.00%
Bootstrap support for H3B6P9 as seed ortholog is 99%.
Bootstrap support for H3G760 as seed ortholog is 93%.

Group of orthologs #640. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:233

H3ACQ7              	100.00%		H3G633              	100.00%
                    	       		H3G675              	59.30%
                    	       		H3G6V8              	10.23%
Bootstrap support for H3ACQ7 as seed ortholog is 62%.
Alternative seed ortholog is M3XJ95 (12 bits away from this cluster)
Bootstrap support for H3G633 as seed ortholog is 100%.

Group of orthologs #641. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.ramorum:344

H3AP34              	100.00%		H3HC28              	100.00%
H3AR60              	48.47%		H3GLI1              	61.61%
Bootstrap support for H3AP34 as seed ortholog is 100%.
Bootstrap support for H3HC28 as seed ortholog is 100%.

Group of orthologs #642. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:344

H3A030              	100.00%		H3GC60              	100.00%
Bootstrap support for H3A030 as seed ortholog is 89%.
Bootstrap support for H3GC60 as seed ortholog is 100%.

Group of orthologs #643. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:344

H3AJZ8              	100.00%		H3G6A1              	100.00%
Bootstrap support for H3AJZ8 as seed ortholog is 99%.
Bootstrap support for H3G6A1 as seed ortholog is 100%.

Group of orthologs #644. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.ramorum:344

H3A244              	100.00%		H3GPE9              	100.00%
Bootstrap support for H3A244 as seed ortholog is 100%.
Bootstrap support for H3GPE9 as seed ortholog is 100%.

Group of orthologs #645. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.ramorum:344

H3AZZ8              	100.00%		H3GV09              	100.00%
Bootstrap support for H3AZZ8 as seed ortholog is 100%.
Bootstrap support for H3GV09 as seed ortholog is 100%.

Group of orthologs #646. Best score 343 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 P.ramorum:343

H3AM93              	100.00%		H3G500              	100.00%
Bootstrap support for H3AM93 as seed ortholog is 100%.
Bootstrap support for H3G500 as seed ortholog is 100%.

Group of orthologs #647. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.ramorum:72

H3AB73              	100.00%		H3GW35              	100.00%
                    	       		H3GW34              	96.29%
                    	       		H3G7N0              	74.44%
                    	       		H3G7I4              	48.74%
                    	       		H3GW37              	35.89%
                    	       		H3G7I6              	31.39%
Bootstrap support for H3AB73 as seed ortholog is 100%.
Bootstrap support for H3GW35 as seed ortholog is 94%.

Group of orthologs #648. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:342

H3A2A7              	100.00%		H3HE41              	100.00%
H3B7C0              	52.36%		
H3B6V3              	9.30%		
H3ARY7              	8.14%		
H3ARS6              	7.92%		
Bootstrap support for H3A2A7 as seed ortholog is 89%.
Bootstrap support for H3HE41 as seed ortholog is 100%.

Group of orthologs #649. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.ramorum:342

H3ALE4              	100.00%		H3GA62              	100.00%
Bootstrap support for H3ALE4 as seed ortholog is 100%.
Bootstrap support for H3GA62 as seed ortholog is 100%.

Group of orthologs #650. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.ramorum:342

H3ARL2              	100.00%		H3G884              	100.00%
Bootstrap support for H3ARL2 as seed ortholog is 100%.
Bootstrap support for H3G884 as seed ortholog is 100%.

Group of orthologs #651. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.ramorum:342

H3BAH2              	100.00%		H3G9V6              	100.00%
Bootstrap support for H3BAH2 as seed ortholog is 100%.
Bootstrap support for H3G9V6 as seed ortholog is 100%.

Group of orthologs #652. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.ramorum:342

H3B3T1              	100.00%		H3GLH2              	100.00%
Bootstrap support for H3B3T1 as seed ortholog is 100%.
Bootstrap support for H3GLH2 as seed ortholog is 100%.

Group of orthologs #653. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:104

H3AMB7              	100.00%		H3H076              	100.00%
H2ZVB0              	17.80%		H3GF94              	57.21%
H3A5I8              	17.80%		
Bootstrap support for H3AMB7 as seed ortholog is 97%.
Bootstrap support for H3H076 as seed ortholog is 98%.

Group of orthologs #654. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:341

H3ARJ1              	100.00%		H3G8C3              	100.00%
H3AA47              	22.69%		
Bootstrap support for H3ARJ1 as seed ortholog is 99%.
Bootstrap support for H3G8C3 as seed ortholog is 100%.

Group of orthologs #655. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.ramorum:21

H3BID3              	100.00%		H3HCE7              	100.00%
H2ZTE2              	14.83%		
Bootstrap support for H3BID3 as seed ortholog is 100%.
Bootstrap support for H3HCE7 as seed ortholog is 68%.
Alternative seed ortholog is H3G5Y8 (21 bits away from this cluster)

Group of orthologs #656. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:256

H2ZWI0              	100.00%		H3GAS1              	100.00%
Bootstrap support for H2ZWI0 as seed ortholog is 99%.
Bootstrap support for H3GAS1 as seed ortholog is 100%.

Group of orthologs #657. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.ramorum:341

H3ARL5              	100.00%		H3G7T3              	100.00%
Bootstrap support for H3ARL5 as seed ortholog is 100%.
Bootstrap support for H3G7T3 as seed ortholog is 100%.

Group of orthologs #658. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.ramorum:51

H3AQB8              	100.00%		H3GCU1              	100.00%
Bootstrap support for H3AQB8 as seed ortholog is 100%.
Bootstrap support for H3GCU1 as seed ortholog is 87%.

Group of orthologs #659. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.ramorum:341

H3B512              	100.00%		H3HDH6              	100.00%
Bootstrap support for H3B512 as seed ortholog is 100%.
Bootstrap support for H3HDH6 as seed ortholog is 100%.

Group of orthologs #660. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:340 P.ramorum:340

H3B8Y3              	100.00%		H3GR54              	100.00%
H3B123              	100.00%		H3GYJ2              	100.00%
H3B4I2              	43.01%		H3HD60              	5.53%
H3BC75              	19.14%		
H3BHR9              	14.08%		
H3ANS4              	13.68%		
H3AYF6              	13.59%		
H3ATM5              	13.46%		
Bootstrap support for H3B8Y3 as seed ortholog is 100%.
Bootstrap support for H3B123 as seed ortholog is 100%.
Bootstrap support for H3GR54 as seed ortholog is 100%.
Bootstrap support for H3GYJ2 as seed ortholog is 100%.

Group of orthologs #661. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:200

H3AHU7              	100.00%		H3GMA5              	100.00%
Bootstrap support for H3AHU7 as seed ortholog is 99%.
Bootstrap support for H3GMA5 as seed ortholog is 99%.

Group of orthologs #662. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:340 P.ramorum:340

H3AWP6              	100.00%		H3H0V6              	100.00%
Bootstrap support for H3AWP6 as seed ortholog is 100%.
Bootstrap support for H3H0V6 as seed ortholog is 100%.

Group of orthologs #663. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.ramorum:339

H3B5E4              	100.00%		H3GQU1              	100.00%
H3AF65              	31.76%		H3H607              	73.62%
H3BDA4              	28.26%		
H3B8V3              	27.86%		
H3ASN8              	25.45%		
Bootstrap support for H3B5E4 as seed ortholog is 100%.
Bootstrap support for H3GQU1 as seed ortholog is 100%.

Group of orthologs #664. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.ramorum:339

H3ACW3              	100.00%		H3GA06              	100.00%
H2ZY92              	48.41%		
H3APQ7              	46.40%		
Bootstrap support for H3ACW3 as seed ortholog is 100%.
Bootstrap support for H3GA06 as seed ortholog is 100%.

Group of orthologs #665. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.ramorum:295

H3AJQ5              	100.00%		H3GTS6              	100.00%
                    	       		H3GPZ0              	50.86%
Bootstrap support for H3AJQ5 as seed ortholog is 100%.
Bootstrap support for H3GTS6 as seed ortholog is 100%.

Group of orthologs #666. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:164

H3A131              	100.00%		H3GFE9              	100.00%
Bootstrap support for H3A131 as seed ortholog is 99%.
Bootstrap support for H3GFE9 as seed ortholog is 99%.

Group of orthologs #667. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.ramorum:339

H3B2Q0              	100.00%		H3GCV5              	100.00%
Bootstrap support for H3B2Q0 as seed ortholog is 100%.
Bootstrap support for H3GCV5 as seed ortholog is 100%.

Group of orthologs #668. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:45

H3AV14              	100.00%		H3HDS7              	100.00%
H3AF81              	13.81%		H3GWJ8              	9.09%
                    	       		H3HC38              	5.09%
Bootstrap support for H3AV14 as seed ortholog is 52%.
Alternative seed ortholog is H3A5T1 (3 bits away from this cluster)
Bootstrap support for H3HDS7 as seed ortholog is 88%.

Group of orthologs #669. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:126

H3A0R9              	100.00%		H3GXW8              	100.00%
Bootstrap support for H3A0R9 as seed ortholog is 99%.
Bootstrap support for H3GXW8 as seed ortholog is 99%.

Group of orthologs #670. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 P.ramorum:338

H3B6A3              	100.00%		H3G9E0              	100.00%
Bootstrap support for H3B6A3 as seed ortholog is 100%.
Bootstrap support for H3G9E0 as seed ortholog is 100%.

Group of orthologs #671. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 P.ramorum:338

H3BDC6              	100.00%		H3GEE9              	100.00%
Bootstrap support for H3BDC6 as seed ortholog is 100%.
Bootstrap support for H3GEE9 as seed ortholog is 100%.

Group of orthologs #672. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 P.ramorum:337

H3AGH6              	100.00%		H3GC81              	100.00%
Bootstrap support for H3AGH6 as seed ortholog is 100%.
Bootstrap support for H3GC81 as seed ortholog is 100%.

Group of orthologs #673. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 P.ramorum:337

H3ARI0              	100.00%		H3G4X8              	100.00%
Bootstrap support for H3ARI0 as seed ortholog is 100%.
Bootstrap support for H3G4X8 as seed ortholog is 100%.

Group of orthologs #674. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.ramorum:337

H3B9G3              	100.00%		H3GS79              	100.00%
Bootstrap support for H3B9G3 as seed ortholog is 100%.
Bootstrap support for H3GS79 as seed ortholog is 100%.

Group of orthologs #675. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.ramorum:254

H3AWH0              	100.00%		H3GPP2              	100.00%
H3AIU2              	55.23%		
Bootstrap support for H3AWH0 as seed ortholog is 100%.
Bootstrap support for H3GPP2 as seed ortholog is 100%.

Group of orthologs #676. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.ramorum:336

H2ZRP6              	100.00%		H3GBX6              	100.00%
Bootstrap support for H2ZRP6 as seed ortholog is 100%.
Bootstrap support for H3GBX6 as seed ortholog is 100%.

Group of orthologs #677. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.ramorum:336

H3ALS7              	100.00%		H3G7S8              	100.00%
Bootstrap support for H3ALS7 as seed ortholog is 100%.
Bootstrap support for H3G7S8 as seed ortholog is 100%.

Group of orthologs #678. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 P.ramorum:335

H2ZYP3              	100.00%		H3G8T1              	100.00%
Bootstrap support for H2ZYP3 as seed ortholog is 100%.
Bootstrap support for H3G8T1 as seed ortholog is 100%.

Group of orthologs #679. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.ramorum:28

H3ATH0              	100.00%		H3GGA5              	100.00%
Bootstrap support for H3ATH0 as seed ortholog is 100%.
Bootstrap support for H3GGA5 as seed ortholog is 77%.

Group of orthologs #680. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.ramorum:334

H3B6V2              	100.00%		H3G7B0              	100.00%
Bootstrap support for H3B6V2 as seed ortholog is 100%.
Bootstrap support for H3G7B0 as seed ortholog is 100%.

Group of orthologs #681. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.ramorum:334

M3XI82              	100.00%		H3GAI9              	100.00%
Bootstrap support for M3XI82 as seed ortholog is 100%.
Bootstrap support for H3GAI9 as seed ortholog is 100%.

Group of orthologs #682. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.ramorum:334

H3BHA1              	100.00%		H3GLH5              	100.00%
Bootstrap support for H3BHA1 as seed ortholog is 100%.
Bootstrap support for H3GLH5 as seed ortholog is 100%.

Group of orthologs #683. Best score 333 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.ramorum:188

H2ZYS5              	100.00%		H3G9Y7              	100.00%
Bootstrap support for H2ZYS5 as seed ortholog is 100%.
Bootstrap support for H3G9Y7 as seed ortholog is 100%.

Group of orthologs #684. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:332 P.ramorum:332

H3AX57              	100.00%		H3GGU9              	100.00%
Bootstrap support for H3AX57 as seed ortholog is 100%.
Bootstrap support for H3GGU9 as seed ortholog is 100%.

Group of orthologs #685. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:331 P.ramorum:331

H3B6T5              	100.00%		H3GLA1              	100.00%
H3AV31              	72.36%		H3GL97              	67.23%
H3AZ97              	19.76%		
H3AKC6              	11.03%		
H3AE22              	7.55%		
H3AT86              	5.03%		
Bootstrap support for H3B6T5 as seed ortholog is 100%.
Bootstrap support for H3GLA1 as seed ortholog is 100%.

Group of orthologs #686. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.ramorum:258

H3A2I6              	100.00%		H3GAE9              	100.00%
Bootstrap support for H3A2I6 as seed ortholog is 100%.
Bootstrap support for H3GAE9 as seed ortholog is 100%.

Group of orthologs #687. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:331 P.ramorum:331

H3AT34              	100.00%		H3GAP0              	100.00%
Bootstrap support for H3AT34 as seed ortholog is 100%.
Bootstrap support for H3GAP0 as seed ortholog is 100%.

Group of orthologs #688. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 P.ramorum:330

H3ACS3              	100.00%		H3H0W7              	100.00%
Bootstrap support for H3ACS3 as seed ortholog is 100%.
Bootstrap support for H3H0W7 as seed ortholog is 100%.

Group of orthologs #689. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:329

H2ZX60              	100.00%		H3G9J8              	100.00%
H3BD00              	26.50%		
H3A386              	17.67%		
Bootstrap support for H2ZX60 as seed ortholog is 100%.
Bootstrap support for H3G9J8 as seed ortholog is 100%.

Group of orthologs #690. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.ramorum:259

H3AV29              	100.00%		H3HDU7              	100.00%
H3BGR0              	51.64%		
H2ZXF5              	34.90%		
Bootstrap support for H3AV29 as seed ortholog is 99%.
Bootstrap support for H3HDU7 as seed ortholog is 100%.

Group of orthologs #691. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:329 P.ramorum:329

H3AP00              	100.00%		H3G898              	100.00%
Bootstrap support for H3AP00 as seed ortholog is 100%.
Bootstrap support for H3G898 as seed ortholog is 100%.

Group of orthologs #692. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:329 P.ramorum:329

H3ADV7              	100.00%		H3GYB8              	100.00%
Bootstrap support for H3ADV7 as seed ortholog is 100%.
Bootstrap support for H3GYB8 as seed ortholog is 100%.

Group of orthologs #693. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:329 P.ramorum:329

H3B0X2              	100.00%		H3HBJ4              	100.00%
Bootstrap support for H3B0X2 as seed ortholog is 100%.
Bootstrap support for H3HBJ4 as seed ortholog is 100%.

Group of orthologs #694. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:57

H3A380              	100.00%		H3GF95              	100.00%
H3BEL1              	52.06%		H3GF97              	60.81%
                    	       		H3GF55              	36.02%
                    	       		H3GIT9              	24.26%
Bootstrap support for H3A380 as seed ortholog is 79%.
Bootstrap support for H3GF95 as seed ortholog is 89%.

Group of orthologs #695. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:328 P.ramorum:108

H3B1M2              	100.00%		H3GAW1              	100.00%
Bootstrap support for H3B1M2 as seed ortholog is 100%.
Bootstrap support for H3GAW1 as seed ortholog is 99%.

Group of orthologs #696. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:226

H3BCH7              	100.00%		H3GAL1              	100.00%
Bootstrap support for H3BCH7 as seed ortholog is 100%.
Bootstrap support for H3GAL1 as seed ortholog is 100%.

Group of orthologs #697. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.ramorum:327

H3APV5              	100.00%		H3GAH0              	100.00%
H3A0P1              	41.68%		
H3BFK8              	40.23%		
H3BBY6              	5.65%		
Bootstrap support for H3APV5 as seed ortholog is 94%.
Bootstrap support for H3GAH0 as seed ortholog is 100%.

Group of orthologs #698. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:327 P.ramorum:327

H3AFA6              	100.00%		H3GBQ6              	100.00%
Bootstrap support for H3AFA6 as seed ortholog is 100%.
Bootstrap support for H3GBQ6 as seed ortholog is 100%.

Group of orthologs #699. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:327 P.ramorum:327

H3AS40              	100.00%		H3G9S6              	100.00%
Bootstrap support for H3AS40 as seed ortholog is 100%.
Bootstrap support for H3G9S6 as seed ortholog is 100%.

Group of orthologs #700. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.ramorum:327

H3B143              	100.00%		H3GHW5              	100.00%
Bootstrap support for H3B143 as seed ortholog is 75%.
Bootstrap support for H3GHW5 as seed ortholog is 100%.

Group of orthologs #701. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:327 P.ramorum:327

H3BF19              	100.00%		H3GQ96              	100.00%
Bootstrap support for H3BF19 as seed ortholog is 100%.
Bootstrap support for H3GQ96 as seed ortholog is 100%.

Group of orthologs #702. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 P.ramorum:326

H3A9D3              	100.00%		H3GGX3              	100.00%
Bootstrap support for H3A9D3 as seed ortholog is 100%.
Bootstrap support for H3GGX3 as seed ortholog is 100%.

Group of orthologs #703. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 P.ramorum:326

H3AWI5              	100.00%		H3GNL2              	100.00%
Bootstrap support for H3AWI5 as seed ortholog is 100%.
Bootstrap support for H3GNL2 as seed ortholog is 100%.

Group of orthologs #704. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 P.ramorum:325

M3XKQ5              	100.00%		H3GIQ1              	100.00%
H2ZXR9              	37.44%		
Bootstrap support for M3XKQ5 as seed ortholog is 100%.
Bootstrap support for H3GIQ1 as seed ortholog is 100%.

Group of orthologs #705. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:325

H2ZSG1              	100.00%		H3GWS1              	100.00%
Bootstrap support for H2ZSG1 as seed ortholog is 96%.
Bootstrap support for H3GWS1 as seed ortholog is 100%.

Group of orthologs #706. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:75

H3AQU2              	100.00%		H3G568              	100.00%
Bootstrap support for H3AQU2 as seed ortholog is 99%.
Bootstrap support for H3G568 as seed ortholog is 98%.

Group of orthologs #707. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 P.ramorum:325

H3AE01              	100.00%		H3GMD2              	100.00%
Bootstrap support for H3AE01 as seed ortholog is 100%.
Bootstrap support for H3GMD2 as seed ortholog is 100%.

Group of orthologs #708. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:324

H3BBH1              	100.00%		H3G771              	100.00%
H3A5J3              	22.28%		
Bootstrap support for H3BBH1 as seed ortholog is 99%.
Bootstrap support for H3G771 as seed ortholog is 100%.

Group of orthologs #709. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.ramorum:120

H3B0C2              	100.00%		H3G5H1              	100.00%
Bootstrap support for H3B0C2 as seed ortholog is 100%.
Bootstrap support for H3G5H1 as seed ortholog is 99%.

Group of orthologs #710. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:323

H2ZX24              	100.00%		H3GXW5              	100.00%
                    	       		H3GXX2              	11.14%
Bootstrap support for H2ZX24 as seed ortholog is 98%.
Bootstrap support for H3GXW5 as seed ortholog is 100%.

Group of orthologs #711. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.ramorum:323

H3A0R1              	100.00%		H3H4A6              	100.00%
H2ZS79              	68.56%		
Bootstrap support for H3A0R1 as seed ortholog is 100%.
Bootstrap support for H3H4A6 as seed ortholog is 100%.

Group of orthologs #712. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.ramorum:323

H3AE33              	100.00%		H3GMD4              	100.00%
Bootstrap support for H3AE33 as seed ortholog is 100%.
Bootstrap support for H3GMD4 as seed ortholog is 100%.

Group of orthologs #713. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:136

H3B0Y7              	100.00%		H3G9R4              	100.00%
Bootstrap support for H3B0Y7 as seed ortholog is 96%.
Bootstrap support for H3G9R4 as seed ortholog is 99%.

Group of orthologs #714. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.ramorum:323

H3B2S1              	100.00%		H3G8K0              	100.00%
Bootstrap support for H3B2S1 as seed ortholog is 100%.
Bootstrap support for H3G8K0 as seed ortholog is 100%.

Group of orthologs #715. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:246

H3B444              	100.00%		H3GBF8              	100.00%
Bootstrap support for H3B444 as seed ortholog is 100%.
Bootstrap support for H3GBF8 as seed ortholog is 100%.

Group of orthologs #716. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.ramorum:322

H3AHX8              	100.00%		H3GG08              	100.00%
                    	       		H3H6T1              	100.00%
Bootstrap support for H3AHX8 as seed ortholog is 100%.
Bootstrap support for H3GG08 as seed ortholog is 100%.
Bootstrap support for H3H6T1 as seed ortholog is 100%.

Group of orthologs #717. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.ramorum:206

H3ASR1              	100.00%		H3GBB6              	100.00%
Bootstrap support for H3ASR1 as seed ortholog is 100%.
Bootstrap support for H3GBB6 as seed ortholog is 100%.

Group of orthologs #718. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 P.ramorum:321

H3A6L1              	100.00%		H3GH46              	100.00%
Bootstrap support for H3A6L1 as seed ortholog is 100%.
Bootstrap support for H3GH46 as seed ortholog is 100%.

Group of orthologs #719. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 P.ramorum:321

H3AMY6              	100.00%		H3GA55              	100.00%
Bootstrap support for H3AMY6 as seed ortholog is 100%.
Bootstrap support for H3GA55 as seed ortholog is 100%.

Group of orthologs #720. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:114

H3AX47              	100.00%		H3G6T1              	100.00%
Bootstrap support for H3AX47 as seed ortholog is 97%.
Bootstrap support for H3G6T1 as seed ortholog is 99%.

Group of orthologs #721. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:76

H2ZZX2              	100.00%		H3HD47              	100.00%
Bootstrap support for H2ZZX2 as seed ortholog is 93%.
Bootstrap support for H3HD47 as seed ortholog is 93%.

Group of orthologs #722. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 P.ramorum:321

H3B814              	100.00%		H3GQD5              	100.00%
Bootstrap support for H3B814 as seed ortholog is 100%.
Bootstrap support for H3GQD5 as seed ortholog is 100%.

Group of orthologs #723. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.ramorum:320

H3A5H3              	100.00%		H3GQR9              	100.00%
Bootstrap support for H3A5H3 as seed ortholog is 100%.
Bootstrap support for H3GQR9 as seed ortholog is 100%.

Group of orthologs #724. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.ramorum:320

H3BGD3              	100.00%		H3G993              	100.00%
Bootstrap support for H3BGD3 as seed ortholog is 100%.
Bootstrap support for H3G993 as seed ortholog is 100%.

Group of orthologs #725. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.ramorum:320

H3AR85              	100.00%		H3GW23              	100.00%
Bootstrap support for H3AR85 as seed ortholog is 100%.
Bootstrap support for H3GW23 as seed ortholog is 100%.

Group of orthologs #726. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:64

H3B2J1              	100.00%		H3G9Y6              	100.00%
H3B3I0              	100.00%		H3GQD4              	100.00%
H3A192              	18.59%		H3GMB3              	12.83%
H3A063              	16.47%		H3GG84              	11.78%
H3BIG5              	15.45%		H3GYP7              	11.26%
H3AF86              	15.37%		H3HC58              	7.98%
                    	       		H3HC66              	7.16%
Bootstrap support for H3B2J1 as seed ortholog is 100%.
Bootstrap support for H3B3I0 as seed ortholog is 99%.
Bootstrap support for H3G9Y6 as seed ortholog is 97%.
Bootstrap support for H3GQD4 as seed ortholog is 51%.
Alternative seed ortholog is H3G8Y7 (64 bits away from this cluster)

Group of orthologs #727. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.ramorum:107

H3BES7              	100.00%		H3G8L3              	100.00%
H3ANL1              	60.42%		H3G8L2              	96.08%
H3BIB4              	45.83%		
Bootstrap support for H3BES7 as seed ortholog is 88%.
Bootstrap support for H3G8L3 as seed ortholog is 100%.

Group of orthologs #728. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 P.ramorum:319

H2ZTP2              	100.00%		H3GNU0              	100.00%
Bootstrap support for H2ZTP2 as seed ortholog is 100%.
Bootstrap support for H3GNU0 as seed ortholog is 100%.

Group of orthologs #729. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:258 P.ramorum:319

H3AP13              	100.00%		H3G934              	100.00%
Bootstrap support for H3AP13 as seed ortholog is 100%.
Bootstrap support for H3G934 as seed ortholog is 100%.

Group of orthologs #730. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:319

H3B9D2              	100.00%		H3GQC7              	100.00%
Bootstrap support for H3B9D2 as seed ortholog is 100%.
Bootstrap support for H3GQC7 as seed ortholog is 100%.

Group of orthologs #731. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 P.ramorum:319

H3BGK2              	100.00%		H3GM34              	100.00%
Bootstrap support for H3BGK2 as seed ortholog is 100%.
Bootstrap support for H3GM34 as seed ortholog is 100%.

Group of orthologs #732. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 P.ramorum:319

M3XKH2              	100.00%		H3HD76              	100.00%
Bootstrap support for M3XKH2 as seed ortholog is 100%.
Bootstrap support for H3HD76 as seed ortholog is 100%.

Group of orthologs #733. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.ramorum:318

H3AB87              	100.00%		H3G9T2              	100.00%
Bootstrap support for H3AB87 as seed ortholog is 100%.
Bootstrap support for H3G9T2 as seed ortholog is 100%.

Group of orthologs #734. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.ramorum:318

H3AZH1              	100.00%		H3G8I1              	100.00%
Bootstrap support for H3AZH1 as seed ortholog is 100%.
Bootstrap support for H3G8I1 as seed ortholog is 100%.

Group of orthologs #735. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.ramorum:318

H3BEI1              	100.00%		H3G5M2              	100.00%
Bootstrap support for H3BEI1 as seed ortholog is 100%.
Bootstrap support for H3G5M2 as seed ortholog is 100%.

Group of orthologs #736. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:317 P.ramorum:317

H3AVP2              	100.00%		H3GKU1              	100.00%
Bootstrap support for H3AVP2 as seed ortholog is 100%.
Bootstrap support for H3GKU1 as seed ortholog is 100%.

Group of orthologs #737. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 P.ramorum:316

H3AAA4              	100.00%		H3G9U4              	100.00%
Bootstrap support for H3AAA4 as seed ortholog is 100%.
Bootstrap support for H3G9U4 as seed ortholog is 100%.

Group of orthologs #738. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.ramorum:150

H3B7F0              	100.00%		H3GC39              	100.00%
H3AN46              	38.75%		H3GWQ9              	100.00%
Bootstrap support for H3B7F0 as seed ortholog is 99%.
Bootstrap support for H3GC39 as seed ortholog is 99%.
Bootstrap support for H3GWQ9 as seed ortholog is 100%.

Group of orthologs #739. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.ramorum:8

H3ALN0              	100.00%		H3G7E4              	100.00%
H3A179              	15.10%		
Bootstrap support for H3ALN0 as seed ortholog is 55%.
Alternative seed ortholog is H2ZTY9 (7 bits away from this cluster)
Bootstrap support for H3G7E4 as seed ortholog is 75%.

Group of orthologs #740. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:315 P.ramorum:315

H3ATY4              	100.00%		H3G6D9              	100.00%
Bootstrap support for H3ATY4 as seed ortholog is 100%.
Bootstrap support for H3G6D9 as seed ortholog is 100%.

Group of orthologs #741. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:314

H3B2E9              	100.00%		H3GFG5              	100.00%
H3BEA8              	59.07%		
Bootstrap support for H3B2E9 as seed ortholog is 99%.
Bootstrap support for H3GFG5 as seed ortholog is 100%.

Group of orthologs #742. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 P.ramorum:314

H3A712              	100.00%		H3G9N0              	100.00%
Bootstrap support for H3A712 as seed ortholog is 100%.
Bootstrap support for H3G9N0 as seed ortholog is 100%.

Group of orthologs #743. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:220

H3AZB6              	100.00%		H3GV19              	100.00%
Bootstrap support for H3AZB6 as seed ortholog is 99%.
Bootstrap support for H3GV19 as seed ortholog is 100%.

Group of orthologs #744. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:146

H3AW20              	100.00%		H3G8U7              	100.00%
H3BB91              	26.05%		
H3ATF1              	23.53%		
H3BBM7              	10.08%		
Bootstrap support for H3AW20 as seed ortholog is 94%.
Bootstrap support for H3G8U7 as seed ortholog is 100%.

Group of orthologs #745. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.ramorum:313

H3B529              	100.00%		H3GW58              	100.00%
M3XH99              	57.58%		
H3AW26              	35.24%		
Bootstrap support for H3B529 as seed ortholog is 61%.
Alternative seed ortholog is H3A3N1 (18 bits away from this cluster)
Bootstrap support for H3GW58 as seed ortholog is 100%.

Group of orthologs #746. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 P.ramorum:313

H3AM61              	100.00%		H3G8Y1              	100.00%
Bootstrap support for H3AM61 as seed ortholog is 100%.
Bootstrap support for H3G8Y1 as seed ortholog is 100%.

Group of orthologs #747. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 P.ramorum:231

H3ADX7              	100.00%		H3GT37              	100.00%
Bootstrap support for H3ADX7 as seed ortholog is 100%.
Bootstrap support for H3GT37 as seed ortholog is 100%.

Group of orthologs #748. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 P.ramorum:313

H3BAQ1              	100.00%		H3HA42              	100.00%
Bootstrap support for H3BAQ1 as seed ortholog is 100%.
Bootstrap support for H3HA42 as seed ortholog is 100%.

Group of orthologs #749. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.ramorum:312

H3B0X3              	100.00%		H3H0L5              	100.00%
                    	       		H3GB79              	99.44%
                    	       		H3GAH3              	99.06%
                    	       		H3H6H4              	45.86%
Bootstrap support for H3B0X3 as seed ortholog is 100%.
Bootstrap support for H3H0L5 as seed ortholog is 100%.

Group of orthologs #750. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.ramorum:312

H3AL75              	100.00%		H3G5E3              	100.00%
H3A7F5              	39.69%		
H3BFP9              	30.50%		
Bootstrap support for H3AL75 as seed ortholog is 100%.
Bootstrap support for H3G5E3 as seed ortholog is 100%.

Group of orthologs #751. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:64

H3AXT0              	100.00%		H3G8X5              	100.00%
H3AYA0              	70.10%		
Bootstrap support for H3AXT0 as seed ortholog is 100%.
Bootstrap support for H3G8X5 as seed ortholog is 99%.

Group of orthologs #752. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.ramorum:312

H3ABL2              	100.00%		H3GB03              	100.00%
Bootstrap support for H3ABL2 as seed ortholog is 100%.
Bootstrap support for H3GB03 as seed ortholog is 100%.

Group of orthologs #753. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.ramorum:312

H3AWZ9              	100.00%		H3GS73              	100.00%
Bootstrap support for H3AWZ9 as seed ortholog is 100%.
Bootstrap support for H3GS73 as seed ortholog is 100%.

Group of orthologs #754. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.ramorum:312

H3AUQ6              	100.00%		H3GWM1              	100.00%
Bootstrap support for H3AUQ6 as seed ortholog is 100%.
Bootstrap support for H3GWM1 as seed ortholog is 100%.

Group of orthologs #755. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.ramorum:312

H3AP09              	100.00%		H3HB59              	100.00%
Bootstrap support for H3AP09 as seed ortholog is 100%.
Bootstrap support for H3HB59 as seed ortholog is 100%.

Group of orthologs #756. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.ramorum:311

H3AB50              	100.00%		H3G895              	100.00%
H3AJQ2              	60.77%		
Bootstrap support for H3AB50 as seed ortholog is 100%.
Bootstrap support for H3G895 as seed ortholog is 100%.

Group of orthologs #757. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.ramorum:311

H3AJU8              	100.00%		H3G7S5              	100.00%
                    	       		H3G6L1              	94.01%
Bootstrap support for H3AJU8 as seed ortholog is 100%.
Bootstrap support for H3G7S5 as seed ortholog is 100%.

Group of orthologs #758. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.ramorum:311

H3AU52              	100.00%		H3GBZ7              	100.00%
H3A6D9              	13.48%		
Bootstrap support for H3AU52 as seed ortholog is 100%.
Bootstrap support for H3GBZ7 as seed ortholog is 100%.

Group of orthologs #759. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.ramorum:311

H3B231              	100.00%		H3G9E5              	100.00%
H3ANX2              	31.22%		
Bootstrap support for H3B231 as seed ortholog is 100%.
Bootstrap support for H3G9E5 as seed ortholog is 100%.

Group of orthologs #760. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:311

H2ZWY2              	100.00%		H3G5C7              	100.00%
Bootstrap support for H2ZWY2 as seed ortholog is 99%.
Bootstrap support for H3G5C7 as seed ortholog is 100%.

Group of orthologs #761. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.ramorum:311

H3BCQ0              	100.00%		H3GFY5              	100.00%
Bootstrap support for H3BCQ0 as seed ortholog is 100%.
Bootstrap support for H3GFY5 as seed ortholog is 100%.

Group of orthologs #762. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 P.ramorum:309

H3APT1              	100.00%		H3GZ79              	100.00%
                    	       		H3H6Q0              	52.81%
                    	       		H3H4H7              	48.29%
Bootstrap support for H3APT1 as seed ortholog is 100%.
Bootstrap support for H3GZ79 as seed ortholog is 100%.

Group of orthologs #763. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 P.ramorum:309

H3AV89              	100.00%		H3G601              	100.00%
Bootstrap support for H3AV89 as seed ortholog is 100%.
Bootstrap support for H3G601 as seed ortholog is 100%.

Group of orthologs #764. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 P.ramorum:309

H3B831              	100.00%		H3GV85              	100.00%
Bootstrap support for H3B831 as seed ortholog is 100%.
Bootstrap support for H3GV85 as seed ortholog is 100%.

Group of orthologs #765. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.ramorum:63

M3XKS9              	100.00%		H3GQJ9              	100.00%
Bootstrap support for M3XKS9 as seed ortholog is 99%.
Bootstrap support for H3GQJ9 as seed ortholog is 93%.

Group of orthologs #766. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.ramorum:308

H3B7D2              	100.00%		H3HC98              	100.00%
                    	       		H3H721              	65.71%
Bootstrap support for H3B7D2 as seed ortholog is 100%.
Bootstrap support for H3HC98 as seed ortholog is 100%.

Group of orthologs #767. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.ramorum:308

H3AFQ6              	100.00%		H3H1H9              	100.00%
Bootstrap support for H3AFQ6 as seed ortholog is 100%.
Bootstrap support for H3H1H9 as seed ortholog is 100%.

Group of orthologs #768. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.ramorum:308

H3AAG2              	100.00%		H3HC64              	100.00%
Bootstrap support for H3AAG2 as seed ortholog is 100%.
Bootstrap support for H3HC64 as seed ortholog is 100%.

Group of orthologs #769. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.ramorum:164

H3BB22              	100.00%		H3HAT3              	100.00%
Bootstrap support for H3BB22 as seed ortholog is 100%.
Bootstrap support for H3HAT3 as seed ortholog is 99%.

Group of orthologs #770. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.ramorum:307

M3XGW4              	31.79%		H3G995              	100.00%
H3AFG7              	100.00%		H3GH24              	100.00%
H3AGM2              	18.57%		H3GH23              	66.07%
Bootstrap support for H3AFG7 as seed ortholog is 100%.
Bootstrap support for H3G995 as seed ortholog is 100%.
Bootstrap support for H3GH24 as seed ortholog is 100%.

Group of orthologs #771. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.ramorum:72

H3B211              	100.00%		H3G876              	100.00%
                    	       		H3GZ94              	5.01%
Bootstrap support for H3B211 as seed ortholog is 100%.
Bootstrap support for H3G876 as seed ortholog is 98%.

Group of orthologs #772. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:105

H3A9Q4              	100.00%		H3G5K9              	100.00%
Bootstrap support for H3A9Q4 as seed ortholog is 96%.
Bootstrap support for H3G5K9 as seed ortholog is 99%.

Group of orthologs #773. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.ramorum:307

H3BEZ8              	100.00%		H3G7V7              	100.00%
Bootstrap support for H3BEZ8 as seed ortholog is 100%.
Bootstrap support for H3G7V7 as seed ortholog is 100%.

Group of orthologs #774. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:188

H3BFJ3              	100.00%		H3H368              	100.00%
Bootstrap support for H3BFJ3 as seed ortholog is 83%.
Bootstrap support for H3H368 as seed ortholog is 99%.

Group of orthologs #775. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:306 P.ramorum:245

H3A726              	100.00%		H3GJ79              	100.00%
Bootstrap support for H3A726 as seed ortholog is 100%.
Bootstrap support for H3GJ79 as seed ortholog is 100%.

Group of orthologs #776. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.ramorum:142

H3AMX9              	100.00%		H3H5C2              	100.00%
H3AA30              	57.20%		H3GTW8              	92.01%
M3XII0              	25.21%		H3GJB7              	12.70%
Bootstrap support for H3AMX9 as seed ortholog is 78%.
Bootstrap support for H3H5C2 as seed ortholog is 99%.

Group of orthologs #777. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 P.ramorum:3

H3ARN2              	100.00%		H3GLM9              	100.00%
H2ZZJ1              	29.98%		H3GWS8              	5.63%
Bootstrap support for H3ARN2 as seed ortholog is 100%.
Bootstrap support for H3GLM9 as seed ortholog is 54%.
Alternative seed ortholog is H3H5W1 (3 bits away from this cluster)

Group of orthologs #778. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.ramorum:128

H3AUE0              	100.00%		H3G7G2              	100.00%
H3BBE2              	37.97%		
Bootstrap support for H3AUE0 as seed ortholog is 100%.
Bootstrap support for H3G7G2 as seed ortholog is 99%.

Group of orthologs #779. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:224

H3ALD0              	100.00%		H3GAI4              	100.00%
Bootstrap support for H3ALD0 as seed ortholog is 100%.
Bootstrap support for H3GAI4 as seed ortholog is 100%.

Group of orthologs #780. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.ramorum:248

H3AWG7              	100.00%		H3GAG1              	100.00%
Bootstrap support for H3AWG7 as seed ortholog is 100%.
Bootstrap support for H3GAG1 as seed ortholog is 100%.

Group of orthologs #781. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:125

H3AGZ3              	100.00%		H3GRS2              	100.00%
Bootstrap support for H3AGZ3 as seed ortholog is 98%.
Bootstrap support for H3GRS2 as seed ortholog is 99%.

Group of orthologs #782. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 P.ramorum:304

H3A6K1              	100.00%		H3G569              	100.00%
Bootstrap support for H3A6K1 as seed ortholog is 100%.
Bootstrap support for H3G569 as seed ortholog is 100%.

Group of orthologs #783. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 P.ramorum:304

H2ZWE7              	100.00%		H3GG46              	100.00%
Bootstrap support for H2ZWE7 as seed ortholog is 100%.
Bootstrap support for H3GG46 as seed ortholog is 100%.

Group of orthologs #784. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 P.ramorum:304

H3ANN4              	100.00%		H3GAJ2              	100.00%
Bootstrap support for H3ANN4 as seed ortholog is 100%.
Bootstrap support for H3GAJ2 as seed ortholog is 100%.

Group of orthologs #785. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 P.ramorum:304

H3A968              	100.00%		H3GVB3              	100.00%
Bootstrap support for H3A968 as seed ortholog is 100%.
Bootstrap support for H3GVB3 as seed ortholog is 100%.

Group of orthologs #786. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:302

H3AMB4              	100.00%		H3G8Q2              	100.00%
H3ALI2              	53.36%		H3G8Q1              	73.96%
                    	       		H3GBA6              	31.45%
                    	       		H3G6L6              	30.47%
                    	       		H3GCX4              	30.22%
                    	       		H3G8A2              	29.98%
                    	       		H3G9N4              	27.52%
                    	       		H3G6L8              	27.27%
                    	       		H3G6S3              	26.78%
                    	       		H3G6L9              	26.04%
                    	       		H3G9S3              	24.82%
                    	       		H3G6U7              	24.57%
                    	       		H3GA92              	24.08%
                    	       		H3GA91              	23.34%
                    	       		H3GCW9              	23.34%
                    	       		H3GCX6              	23.10%
                    	       		H3GCW8              	21.87%
                    	       		H3GA93              	20.15%
                    	       		H3G864              	18.18%
                    	       		H3GYJ8              	17.94%
                    	       		H3GCX7              	16.71%
Bootstrap support for H3AMB4 as seed ortholog is 100%.
Bootstrap support for H3G8Q2 as seed ortholog is 100%.

Group of orthologs #787. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:221

H3AZG1              	100.00%		H3GB56              	100.00%
H3A9B4              	37.23%		H3GAE8              	84.69%
Bootstrap support for H3AZG1 as seed ortholog is 97%.
Bootstrap support for H3GB56 as seed ortholog is 100%.

Group of orthologs #788. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:205

H3AE65              	100.00%		H3GV89              	100.00%
H3B461              	48.61%		H3G9X5              	59.55%
Bootstrap support for H3AE65 as seed ortholog is 100%.
Bootstrap support for H3GV89 as seed ortholog is 100%.

Group of orthologs #789. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.ramorum:136

H3B402              	100.00%		H3H453              	100.00%
                    	       		H3GME1              	96.39%
Bootstrap support for H3B402 as seed ortholog is 99%.
Bootstrap support for H3H453 as seed ortholog is 99%.

Group of orthologs #790. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.ramorum:302

H2ZXB9              	100.00%		H3GM55              	100.00%
Bootstrap support for H2ZXB9 as seed ortholog is 100%.
Bootstrap support for H3GM55 as seed ortholog is 100%.

Group of orthologs #791. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 P.ramorum:301

H2ZYU5              	100.00%		H3GB48              	100.00%
                    	       		H3H7S5              	13.25%
Bootstrap support for H2ZYU5 as seed ortholog is 100%.
Bootstrap support for H3GB48 as seed ortholog is 100%.

Group of orthologs #792. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:301

H3AW86              	100.00%		H3GBK0              	100.00%
Bootstrap support for H3AW86 as seed ortholog is 100%.
Bootstrap support for H3GBK0 as seed ortholog is 100%.

Group of orthologs #793. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 P.ramorum:182

H3BC16              	100.00%		H3GD00              	100.00%
Bootstrap support for H3BC16 as seed ortholog is 100%.
Bootstrap support for H3GD00 as seed ortholog is 100%.

Group of orthologs #794. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.ramorum:300

H3B0S0              	100.00%		H3G7C2              	100.00%
Bootstrap support for H3B0S0 as seed ortholog is 100%.
Bootstrap support for H3G7C2 as seed ortholog is 100%.

Group of orthologs #795. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.ramorum:300

H3B063              	100.00%		H3G8G2              	100.00%
Bootstrap support for H3B063 as seed ortholog is 100%.
Bootstrap support for H3G8G2 as seed ortholog is 100%.

Group of orthologs #796. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.ramorum:300

H3B2C3              	100.00%		H3G8C1              	100.00%
Bootstrap support for H3B2C3 as seed ortholog is 100%.
Bootstrap support for H3G8C1 as seed ortholog is 100%.

Group of orthologs #797. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:209

H3B6K3              	100.00%		H3G889              	100.00%
Bootstrap support for H3B6K3 as seed ortholog is 100%.
Bootstrap support for H3G889 as seed ortholog is 100%.

Group of orthologs #798. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.ramorum:300

H2ZZ69              	100.00%		H3HD31              	100.00%
Bootstrap support for H2ZZ69 as seed ortholog is 49%.
Alternative seed ortholog is H3BFM5 (7 bits away from this cluster)
Bootstrap support for H3HD31 as seed ortholog is 100%.

Group of orthologs #799. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.ramorum:300

H3AWJ0              	100.00%		H3GSZ8              	100.00%
Bootstrap support for H3AWJ0 as seed ortholog is 100%.
Bootstrap support for H3GSZ8 as seed ortholog is 100%.

Group of orthologs #800. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.ramorum:300

H3AWC9              	100.00%		H3GUA9              	100.00%
Bootstrap support for H3AWC9 as seed ortholog is 100%.
Bootstrap support for H3GUA9 as seed ortholog is 100%.

Group of orthologs #801. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:299

H3AM73              	100.00%		H3GB12              	100.00%
                    	       		H3G596              	83.40%
Bootstrap support for H3AM73 as seed ortholog is 100%.
Bootstrap support for H3GB12 as seed ortholog is 100%.

Group of orthologs #802. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.ramorum:299

H3AC07              	100.00%		H3GEK8              	100.00%
Bootstrap support for H3AC07 as seed ortholog is 100%.
Bootstrap support for H3GEK8 as seed ortholog is 100%.

Group of orthologs #803. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.ramorum:299

H3A697              	100.00%		H3GUD2              	100.00%
Bootstrap support for H3A697 as seed ortholog is 100%.
Bootstrap support for H3GUD2 as seed ortholog is 100%.

Group of orthologs #804. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.ramorum:299

H3BAF0              	100.00%		H3G5S1              	100.00%
Bootstrap support for H3BAF0 as seed ortholog is 100%.
Bootstrap support for H3G5S1 as seed ortholog is 100%.

Group of orthologs #805. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.ramorum:299

H3B6R4              	100.00%		H3GXP2              	100.00%
Bootstrap support for H3B6R4 as seed ortholog is 78%.
Bootstrap support for H3GXP2 as seed ortholog is 100%.

Group of orthologs #806. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.ramorum:299

H3BHH6              	100.00%		H3HCF7              	100.00%
Bootstrap support for H3BHH6 as seed ortholog is 100%.
Bootstrap support for H3HCF7 as seed ortholog is 100%.

Group of orthologs #807. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.ramorum:298

H3BDH3              	100.00%		H3GFB2              	100.00%
                    	       		H3G779              	52.05%
Bootstrap support for H3BDH3 as seed ortholog is 100%.
Bootstrap support for H3GFB2 as seed ortholog is 100%.

Group of orthologs #808. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.ramorum:298

H2ZVT5              	100.00%		H3G856              	100.00%
Bootstrap support for H2ZVT5 as seed ortholog is 100%.
Bootstrap support for H3G856 as seed ortholog is 100%.

Group of orthologs #809. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.ramorum:298

H3A733              	100.00%		H3GY66              	100.00%
Bootstrap support for H3A733 as seed ortholog is 100%.
Bootstrap support for H3GY66 as seed ortholog is 100%.

Group of orthologs #810. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.ramorum:239

M3XIA9              	100.00%		H3GAI3              	100.00%
Bootstrap support for M3XIA9 as seed ortholog is 100%.
Bootstrap support for H3GAI3 as seed ortholog is 100%.

Group of orthologs #811. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.ramorum:298

H3B001              	100.00%		H3GYD8              	100.00%
Bootstrap support for H3B001 as seed ortholog is 100%.
Bootstrap support for H3GYD8 as seed ortholog is 100%.

Group of orthologs #812. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:297

H3ACE2              	100.00%		H3GAR2              	100.00%
H2ZVW0              	47.83%		
H3A961              	37.50%		
H3BD34              	35.33%		
Bootstrap support for H3ACE2 as seed ortholog is 100%.
Bootstrap support for H3GAR2 as seed ortholog is 100%.

Group of orthologs #813. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:152

H3AY68              	100.00%		H3G737              	100.00%
H3B476              	44.89%		
H2ZZJ0              	17.93%		
Bootstrap support for H3AY68 as seed ortholog is 99%.
Bootstrap support for H3G737 as seed ortholog is 99%.

Group of orthologs #814. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.ramorum:297

H3AQH1              	100.00%		H3GJV7              	100.00%
H2ZWU0              	42.37%		H3GJV8              	100.00%
Bootstrap support for H3AQH1 as seed ortholog is 100%.
Bootstrap support for H3GJV7 as seed ortholog is 100%.
Bootstrap support for H3GJV8 as seed ortholog is 100%.

Group of orthologs #815. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.ramorum:297

H3BG06              	100.00%		H3GD17              	100.00%
H3A6Q5              	63.39%		
H3B5P0              	61.63%		
Bootstrap support for H3BG06 as seed ortholog is 100%.
Bootstrap support for H3GD17 as seed ortholog is 100%.

Group of orthologs #816. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:204

H3A6P1              	100.00%		H3GA11              	100.00%
Bootstrap support for H3A6P1 as seed ortholog is 100%.
Bootstrap support for H3GA11 as seed ortholog is 100%.

Group of orthologs #817. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.ramorum:297

H3B2D8              	100.00%		H3GBR9              	100.00%
Bootstrap support for H3B2D8 as seed ortholog is 100%.
Bootstrap support for H3GBR9 as seed ortholog is 100%.

Group of orthologs #818. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.ramorum:297

H2ZW53              	100.00%		H3HDQ1              	100.00%
Bootstrap support for H2ZW53 as seed ortholog is 100%.
Bootstrap support for H3HDQ1 as seed ortholog is 100%.

Group of orthologs #819. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:296 P.ramorum:127

H2ZVJ5              	100.00%		H3G7E6              	100.00%
Bootstrap support for H2ZVJ5 as seed ortholog is 100%.
Bootstrap support for H3G7E6 as seed ortholog is 100%.

Group of orthologs #820. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:296 P.ramorum:296

H3B832              	100.00%		H3G6M9              	100.00%
Bootstrap support for H3B832 as seed ortholog is 100%.
Bootstrap support for H3G6M9 as seed ortholog is 100%.

Group of orthologs #821. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:186

H3AF75              	100.00%		H3GY11              	100.00%
Bootstrap support for H3AF75 as seed ortholog is 100%.
Bootstrap support for H3GY11 as seed ortholog is 99%.

Group of orthologs #822. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:295

H3BIE5              	100.00%		H3GVU0              	100.00%
H3A9B1              	17.25%		
H3AAT0              	11.24%		
Bootstrap support for H3BIE5 as seed ortholog is 99%.
Bootstrap support for H3GVU0 as seed ortholog is 100%.

Group of orthologs #823. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.ramorum:26

H3BG82              	100.00%		H3HCG3              	100.00%
H2ZYT6              	29.62%		
Bootstrap support for H3BG82 as seed ortholog is 100%.
Bootstrap support for H3HCG3 as seed ortholog is 68%.
Alternative seed ortholog is H3G8U0 (26 bits away from this cluster)

Group of orthologs #824. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.ramorum:295

M3XHM2              	100.00%		H3G7F6              	100.00%
Bootstrap support for M3XHM2 as seed ortholog is 100%.
Bootstrap support for H3G7F6 as seed ortholog is 100%.

Group of orthologs #825. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:79

H3AFS5              	100.00%		H3GAV1              	100.00%
H3AUU7              	55.59%		H3G9G5              	46.30%
H3B4L0              	31.95%		
H3AYT7              	26.36%		
H3B6X4              	12.46%		
M3XIG4              	9.46%		
H3AQ06              	6.16%		
Bootstrap support for H3AFS5 as seed ortholog is 97%.
Bootstrap support for H3GAV1 as seed ortholog is 97%.

Group of orthologs #826. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.ramorum:294

H2ZXW5              	100.00%		H3GGZ4              	100.00%
Bootstrap support for H2ZXW5 as seed ortholog is 100%.
Bootstrap support for H3GGZ4 as seed ortholog is 100%.

Group of orthologs #827. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:294

H3AFN1              	100.00%		H3H1I2              	100.00%
Bootstrap support for H3AFN1 as seed ortholog is 99%.
Bootstrap support for H3H1I2 as seed ortholog is 100%.

Group of orthologs #828. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.ramorum:294

H3B260              	100.00%		H3GWV6              	100.00%
Bootstrap support for H3B260 as seed ortholog is 100%.
Bootstrap support for H3GWV6 as seed ortholog is 100%.

Group of orthologs #829. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.ramorum:293

H3ATU9              	100.00%		H3GA02              	100.00%
H3BDZ3              	77.99%		
H3AFI2              	64.83%		
H3BDS0              	41.63%		
H3ARH8              	38.28%		
H3BED5              	33.49%		
H3A6E3              	33.49%		
H3AYB1              	19.38%		
H3ADJ0              	10.29%		
Bootstrap support for H3ATU9 as seed ortholog is 88%.
Bootstrap support for H3GA02 as seed ortholog is 100%.

Group of orthologs #830. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:293

H2ZXE5              	100.00%		H3G6W0              	100.00%
Bootstrap support for H2ZXE5 as seed ortholog is 99%.
Bootstrap support for H3G6W0 as seed ortholog is 100%.

Group of orthologs #831. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:293

H2ZU07              	100.00%		H3GAD9              	100.00%
Bootstrap support for H2ZU07 as seed ortholog is 100%.
Bootstrap support for H3GAD9 as seed ortholog is 100%.

Group of orthologs #832. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:293

H2ZZ48              	100.00%		H3GMF5              	100.00%
Bootstrap support for H2ZZ48 as seed ortholog is 100%.
Bootstrap support for H3GMF5 as seed ortholog is 100%.

Group of orthologs #833. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:293

H3AZ67              	100.00%		H3G745              	100.00%
Bootstrap support for H3AZ67 as seed ortholog is 100%.
Bootstrap support for H3G745 as seed ortholog is 100%.

Group of orthologs #834. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:293

H3BC25              	100.00%		H3G9V8              	100.00%
Bootstrap support for H3BC25 as seed ortholog is 100%.
Bootstrap support for H3G9V8 as seed ortholog is 100%.

Group of orthologs #835. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.ramorum:168

H3BC11              	100.00%		H3GHG7              	100.00%
Bootstrap support for H3BC11 as seed ortholog is 100%.
Bootstrap support for H3GHG7 as seed ortholog is 99%.

Group of orthologs #836. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:97

H3AYG8              	100.00%		H3GA13              	100.00%
H2ZWJ1              	49.05%		H3HAB9              	68.45%
H2ZW35              	44.05%		
Bootstrap support for H3AYG8 as seed ortholog is 88%.
Bootstrap support for H3GA13 as seed ortholog is 97%.

Group of orthologs #837. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.ramorum:292

H3ACZ5              	100.00%		H3GLP0              	100.00%
                    	       		H3GLN8              	59.92%
Bootstrap support for H3ACZ5 as seed ortholog is 100%.
Bootstrap support for H3GLP0 as seed ortholog is 100%.

Group of orthologs #838. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.ramorum:292

H3BG01              	100.00%		H3G9M2              	100.00%
H3BE45              	46.77%		
Bootstrap support for H3BG01 as seed ortholog is 100%.
Bootstrap support for H3G9M2 as seed ortholog is 100%.

Group of orthologs #839. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.ramorum:292

H3BCK7              	100.00%		H3GHT8              	100.00%
                    	       		H3GUZ7              	6.30%
Bootstrap support for H3BCK7 as seed ortholog is 100%.
Bootstrap support for H3GHT8 as seed ortholog is 100%.

Group of orthologs #840. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.ramorum:242

H2ZV14              	100.00%		H3G8N9              	100.00%
Bootstrap support for H2ZV14 as seed ortholog is 100%.
Bootstrap support for H3G8N9 as seed ortholog is 100%.

Group of orthologs #841. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:17

H3ADT9              	100.00%		H3G588              	100.00%
Bootstrap support for H3ADT9 as seed ortholog is 99%.
Bootstrap support for H3G588 as seed ortholog is 62%.
Alternative seed ortholog is H3G6I5 (17 bits away from this cluster)

Group of orthologs #842. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.ramorum:292

H3AEW1              	100.00%		H3G8Q0              	100.00%
Bootstrap support for H3AEW1 as seed ortholog is 100%.
Bootstrap support for H3G8Q0 as seed ortholog is 100%.

Group of orthologs #843. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.ramorum:292

H3AWR4              	100.00%		H3G912              	100.00%
Bootstrap support for H3AWR4 as seed ortholog is 100%.
Bootstrap support for H3G912 as seed ortholog is 100%.

Group of orthologs #844. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:190

H3B4P4              	100.00%		H3HE02              	100.00%
H3AJD9              	45.18%		H3H001              	62.87%
Bootstrap support for H3B4P4 as seed ortholog is 99%.
Bootstrap support for H3HE02 as seed ortholog is 99%.

Group of orthologs #845. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.ramorum:36

H3A6I1              	100.00%		H3GVV5              	100.00%
H3BH41              	33.26%		
Bootstrap support for H3A6I1 as seed ortholog is 72%.
Alternative seed ortholog is H2ZYK1 (18 bits away from this cluster)
Bootstrap support for H3GVV5 as seed ortholog is 87%.

Group of orthologs #846. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.ramorum:291

H3AQQ7              	100.00%		H3HBV1              	100.00%
Bootstrap support for H3AQQ7 as seed ortholog is 92%.
Bootstrap support for H3HBV1 as seed ortholog is 100%.

Group of orthologs #847. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.ramorum:94

H3AV19              	100.00%		H3GW41              	100.00%
H3AVR3              	45.21%		H3HB65              	13.41%
H3B5X6              	22.89%		H3GIW2              	13.11%
Bootstrap support for H3AV19 as seed ortholog is 60%.
Alternative seed ortholog is H2ZYK1 (8 bits away from this cluster)
Bootstrap support for H3GW41 as seed ortholog is 99%.

Group of orthologs #848. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.ramorum:290

H3B466              	100.00%		H3GFJ2              	100.00%
H3BEE7              	45.60%		H3G8J1              	75.85%
Bootstrap support for H3B466 as seed ortholog is 100%.
Bootstrap support for H3GFJ2 as seed ortholog is 100%.

Group of orthologs #849. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.ramorum:290

H3AES1              	100.00%		H3GCB9              	100.00%
Bootstrap support for H3AES1 as seed ortholog is 100%.
Bootstrap support for H3GCB9 as seed ortholog is 100%.

Group of orthologs #850. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.ramorum:290

H3AQC8              	100.00%		H3GLL2              	100.00%
Bootstrap support for H3AQC8 as seed ortholog is 100%.
Bootstrap support for H3GLL2 as seed ortholog is 100%.

Group of orthologs #851. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.ramorum:290

H3BHX9              	100.00%		H3G9D2              	100.00%
Bootstrap support for H3BHX9 as seed ortholog is 100%.
Bootstrap support for H3G9D2 as seed ortholog is 100%.

Group of orthologs #852. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.ramorum:289

H2ZZW1              	100.00%		H3GRQ7              	100.00%
Bootstrap support for H2ZZW1 as seed ortholog is 100%.
Bootstrap support for H3GRQ7 as seed ortholog is 100%.

Group of orthologs #853. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.ramorum:289

H3AQC5              	100.00%		H3G4X4              	100.00%
Bootstrap support for H3AQC5 as seed ortholog is 100%.
Bootstrap support for H3G4X4 as seed ortholog is 100%.

Group of orthologs #854. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.ramorum:197

H3BGW8              	100.00%		H3G9Y2              	100.00%
Bootstrap support for H3BGW8 as seed ortholog is 100%.
Bootstrap support for H3G9Y2 as seed ortholog is 100%.

Group of orthologs #855. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:184

H2ZTA0              	100.00%		H3G712              	100.00%
Bootstrap support for H2ZTA0 as seed ortholog is 99%.
Bootstrap support for H3G712 as seed ortholog is 99%.

Group of orthologs #856. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.ramorum:74

H3BCE0              	100.00%		H3GBY0              	100.00%
Bootstrap support for H3BCE0 as seed ortholog is 100%.
Bootstrap support for H3GBY0 as seed ortholog is 92%.

Group of orthologs #857. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.ramorum:288

H3AUX9              	100.00%		H3HD82              	100.00%
Bootstrap support for H3AUX9 as seed ortholog is 100%.
Bootstrap support for H3HD82 as seed ortholog is 100%.

Group of orthologs #858. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.ramorum:51

H3B1N9              	100.00%		H3GMF2              	100.00%
H3AE58              	26.34%		
H3AH33              	18.12%		
H3AN19              	17.68%		
Bootstrap support for H3B1N9 as seed ortholog is 95%.
Bootstrap support for H3GMF2 as seed ortholog is 94%.

Group of orthologs #859. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:231

H3A0W8              	100.00%		H3G614              	100.00%
Bootstrap support for H3A0W8 as seed ortholog is 100%.
Bootstrap support for H3G614 as seed ortholog is 100%.

Group of orthologs #860. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.ramorum:287

H3B881              	100.00%		H3G8K1              	100.00%
Bootstrap support for H3B881 as seed ortholog is 100%.
Bootstrap support for H3G8K1 as seed ortholog is 100%.

Group of orthologs #861. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.ramorum:287

H3AQM5              	100.00%		H3GTZ8              	100.00%
Bootstrap support for H3AQM5 as seed ortholog is 100%.
Bootstrap support for H3GTZ8 as seed ortholog is 100%.

Group of orthologs #862. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:201

H3ATB7              	100.00%		H3H0M5              	100.00%
Bootstrap support for H3ATB7 as seed ortholog is 99%.
Bootstrap support for H3H0M5 as seed ortholog is 100%.

Group of orthologs #863. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 P.ramorum:286

H3AQU4              	100.00%		H3GEU2              	100.00%
H2ZVN7              	59.26%		
H3B2N2              	34.04%		
Bootstrap support for H3AQU4 as seed ortholog is 100%.
Bootstrap support for H3GEU2 as seed ortholog is 100%.

Group of orthologs #864. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 P.ramorum:286

H2ZXM1              	100.00%		H3G980              	100.00%
Bootstrap support for H2ZXM1 as seed ortholog is 100%.
Bootstrap support for H3G980 as seed ortholog is 100%.

Group of orthologs #865. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.ramorum:285

H3BHK5              	100.00%		H3G9H9              	100.00%
Bootstrap support for H3BHK5 as seed ortholog is 100%.
Bootstrap support for H3G9H9 as seed ortholog is 100%.

Group of orthologs #866. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:137

M3XI55              	100.00%		H3G9K1              	100.00%
H3A7Z6              	8.16%		
Bootstrap support for M3XI55 as seed ortholog is 100%.
Bootstrap support for H3G9K1 as seed ortholog is 100%.

Group of orthologs #867. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:104

H3B8J7              	100.00%		H3HCM2              	100.00%
H3AWD6              	80.51%		
Bootstrap support for H3B8J7 as seed ortholog is 84%.
Bootstrap support for H3HCM2 as seed ortholog is 99%.

Group of orthologs #868. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.ramorum:284

H3ANS2              	100.00%		H3GAN3              	100.00%
Bootstrap support for H3ANS2 as seed ortholog is 100%.
Bootstrap support for H3GAN3 as seed ortholog is 100%.

Group of orthologs #869. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.ramorum:284

H3APQ8              	100.00%		H3GKZ8              	100.00%
Bootstrap support for H3APQ8 as seed ortholog is 100%.
Bootstrap support for H3GKZ8 as seed ortholog is 100%.

Group of orthologs #870. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:284

H3ABL3              	100.00%		H3GXU5              	100.00%
Bootstrap support for H3ABL3 as seed ortholog is 100%.
Bootstrap support for H3GXU5 as seed ortholog is 100%.

Group of orthologs #871. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.ramorum:284

H3BFQ5              	100.00%		H3G7J2              	100.00%
Bootstrap support for H3BFQ5 as seed ortholog is 100%.
Bootstrap support for H3G7J2 as seed ortholog is 100%.

Group of orthologs #872. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.ramorum:284

H3BHY8              	100.00%		H3G7D8              	100.00%
Bootstrap support for H3BHY8 as seed ortholog is 100%.
Bootstrap support for H3G7D8 as seed ortholog is 100%.

Group of orthologs #873. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.ramorum:283

H3AAR1              	100.00%		H3GSJ6              	100.00%
Bootstrap support for H3AAR1 as seed ortholog is 100%.
Bootstrap support for H3GSJ6 as seed ortholog is 100%.

Group of orthologs #874. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.ramorum:283

H3AL64              	100.00%		H3GLR2              	100.00%
Bootstrap support for H3AL64 as seed ortholog is 100%.
Bootstrap support for H3GLR2 as seed ortholog is 100%.

Group of orthologs #875. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:283

H3AFP6              	100.00%		H3HCW1              	100.00%
Bootstrap support for H3AFP6 as seed ortholog is 96%.
Bootstrap support for H3HCW1 as seed ortholog is 100%.

Group of orthologs #876. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.ramorum:283

H3BF43              	100.00%		H3GY38              	100.00%
Bootstrap support for H3BF43 as seed ortholog is 100%.
Bootstrap support for H3GY38 as seed ortholog is 100%.

Group of orthologs #877. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.ramorum:283

H3BFY7              	100.00%		H3H115              	100.00%
Bootstrap support for H3BFY7 as seed ortholog is 100%.
Bootstrap support for H3H115 as seed ortholog is 100%.

Group of orthologs #878. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.ramorum:282

H3AP90              	100.00%		H3G7Z8              	100.00%
                    	       		H3H6P9              	52.00%
                    	       		H3H2D9              	6.60%
Bootstrap support for H3AP90 as seed ortholog is 100%.
Bootstrap support for H3G7Z8 as seed ortholog is 100%.

Group of orthologs #879. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.ramorum:282

H3ALN3              	100.00%		H3GTW5              	100.00%
H3AZX5              	8.15%		
Bootstrap support for H3ALN3 as seed ortholog is 100%.
Bootstrap support for H3GTW5 as seed ortholog is 100%.

Group of orthologs #880. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.ramorum:282

H3BHG4              	100.00%		H3GNU1              	100.00%
H3B1F4              	35.69%		
Bootstrap support for H3BHG4 as seed ortholog is 100%.
Bootstrap support for H3GNU1 as seed ortholog is 100%.

Group of orthologs #881. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:282

H3A5Q2              	100.00%		H3G890              	100.00%
Bootstrap support for H3A5Q2 as seed ortholog is 99%.
Bootstrap support for H3G890 as seed ortholog is 100%.

Group of orthologs #882. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.ramorum:181

H3BAY6              	100.00%		H3G6K0              	100.00%
Bootstrap support for H3BAY6 as seed ortholog is 100%.
Bootstrap support for H3G6K0 as seed ortholog is 100%.

Group of orthologs #883. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:117

H3B4K5              	100.00%		H3G7Q3              	100.00%
Bootstrap support for H3B4K5 as seed ortholog is 99%.
Bootstrap support for H3G7Q3 as seed ortholog is 99%.

Group of orthologs #884. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.ramorum:281

H3B654              	100.00%		H3GER6              	100.00%
Bootstrap support for H3B654 as seed ortholog is 100%.
Bootstrap support for H3GER6 as seed ortholog is 100%.

Group of orthologs #885. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.ramorum:281

H3BFH4              	100.00%		H3G7S4              	100.00%
Bootstrap support for H3BFH4 as seed ortholog is 100%.
Bootstrap support for H3G7S4 as seed ortholog is 100%.

Group of orthologs #886. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:12

H3BCZ3              	100.00%		H3GBJ0              	100.00%
Bootstrap support for H3BCZ3 as seed ortholog is 93%.
Bootstrap support for H3GBJ0 as seed ortholog is 62%.
Alternative seed ortholog is H3GL72 (12 bits away from this cluster)

Group of orthologs #887. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:177

H3AEP4              	100.00%		H3GA09              	100.00%
                    	       		H3GA84              	29.61%
Bootstrap support for H3AEP4 as seed ortholog is 92%.
Bootstrap support for H3GA09 as seed ortholog is 100%.

Group of orthologs #888. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.ramorum:30

H3B8Z8              	100.00%		H3GMH7              	100.00%
M3XJ11              	30.72%		
Bootstrap support for H3B8Z8 as seed ortholog is 93%.
Bootstrap support for H3GMH7 as seed ortholog is 73%.
Alternative seed ortholog is H3G7G7 (30 bits away from this cluster)

Group of orthologs #889. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 P.ramorum:182

H2ZRK8              	100.00%		H3G955              	100.00%
Bootstrap support for H2ZRK8 as seed ortholog is 100%.
Bootstrap support for H3G955 as seed ortholog is 100%.

Group of orthologs #890. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.ramorum:172

H3AAQ7              	100.00%		H3G8I5              	100.00%
Bootstrap support for H3AAQ7 as seed ortholog is 100%.
Bootstrap support for H3G8I5 as seed ortholog is 100%.

Group of orthologs #891. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.ramorum:280

H3A5Q1              	100.00%		H3GS71              	100.00%
Bootstrap support for H3A5Q1 as seed ortholog is 100%.
Bootstrap support for H3GS71 as seed ortholog is 100%.

Group of orthologs #892. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.ramorum:280

H3AVK8              	100.00%		H3H299              	100.00%
Bootstrap support for H3AVK8 as seed ortholog is 100%.
Bootstrap support for H3H299 as seed ortholog is 100%.

Group of orthologs #893. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.ramorum:206

H3B2H7              	100.00%		H3GXB4              	100.00%
Bootstrap support for H3B2H7 as seed ortholog is 90%.
Bootstrap support for H3GXB4 as seed ortholog is 100%.

Group of orthologs #894. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.ramorum:280

H3BHP1              	100.00%		H3HD56              	100.00%
Bootstrap support for H3BHP1 as seed ortholog is 100%.
Bootstrap support for H3HD56 as seed ortholog is 100%.

Group of orthologs #895. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.ramorum:279

H3AB41              	100.00%		H3G994              	100.00%
Bootstrap support for H3AB41 as seed ortholog is 100%.
Bootstrap support for H3G994 as seed ortholog is 100%.

Group of orthologs #896. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:137

H3ASF2              	100.00%		H3GNQ4              	100.00%
Bootstrap support for H3ASF2 as seed ortholog is 99%.
Bootstrap support for H3GNQ4 as seed ortholog is 99%.

Group of orthologs #897. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.ramorum:210

H3BAC1              	100.00%		H3GAF7              	100.00%
Bootstrap support for H3BAC1 as seed ortholog is 100%.
Bootstrap support for H3GAF7 as seed ortholog is 100%.

Group of orthologs #898. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.ramorum:139

H3BGA5              	100.00%		H3GI71              	100.00%
Bootstrap support for H3BGA5 as seed ortholog is 100%.
Bootstrap support for H3GI71 as seed ortholog is 99%.

Group of orthologs #899. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.ramorum:187

H3BI16              	100.00%		H3GWT2              	100.00%
Bootstrap support for H3BI16 as seed ortholog is 99%.
Bootstrap support for H3GWT2 as seed ortholog is 99%.

Group of orthologs #900. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.ramorum:278

H3A6D1              	100.00%		H3G9I2              	100.00%
H3ASN3              	30.26%		
Bootstrap support for H3A6D1 as seed ortholog is 100%.
Bootstrap support for H3G9I2 as seed ortholog is 100%.

Group of orthologs #901. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.ramorum:278

H3AR71              	100.00%		H3HBB4              	100.00%
H3BE37              	9.24%		
Bootstrap support for H3AR71 as seed ortholog is 100%.
Bootstrap support for H3HBB4 as seed ortholog is 100%.

Group of orthologs #902. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.ramorum:278

H3A1M6              	100.00%		H3GV05              	100.00%
Bootstrap support for H3A1M6 as seed ortholog is 100%.
Bootstrap support for H3GV05 as seed ortholog is 100%.

Group of orthologs #903. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.ramorum:277

H3A0A8              	100.00%		H3G5E0              	100.00%
H3BHW4              	100.00%		
Bootstrap support for H3A0A8 as seed ortholog is 100%.
Bootstrap support for H3BHW4 as seed ortholog is 100%.
Bootstrap support for H3G5E0 as seed ortholog is 100%.

Group of orthologs #904. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:154

H2ZTZ0              	100.00%		H3GQ46              	100.00%
                    	       		H3GAB1              	27.51%
Bootstrap support for H2ZTZ0 as seed ortholog is 93%.
Bootstrap support for H3GQ46 as seed ortholog is 99%.

Group of orthologs #905. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.ramorum:277

H2ZYU7              	100.00%		H3GPP5              	100.00%
                    	       		H3GFR1              	19.96%
Bootstrap support for H2ZYU7 as seed ortholog is 100%.
Bootstrap support for H3GPP5 as seed ortholog is 100%.

Group of orthologs #906. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.ramorum:277

H3AV80              	100.00%		H3G5G9              	100.00%
H2ZSN5              	60.06%		
Bootstrap support for H3AV80 as seed ortholog is 100%.
Bootstrap support for H3G5G9 as seed ortholog is 100%.

Group of orthologs #907. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:142

H3B7M8              	100.00%		H3G9D1              	100.00%
H3AK24              	62.41%		
Bootstrap support for H3B7M8 as seed ortholog is 99%.
Bootstrap support for H3G9D1 as seed ortholog is 100%.

Group of orthologs #908. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.ramorum:68

H3BFG9              	100.00%		H3GHC6              	100.00%
H3AMH0              	36.83%		
Bootstrap support for H3BFG9 as seed ortholog is 100%.
Bootstrap support for H3GHC6 as seed ortholog is 89%.

Group of orthologs #909. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.ramorum:116

H3A5P1              	100.00%		H3GS31              	100.00%
Bootstrap support for H3A5P1 as seed ortholog is 100%.
Bootstrap support for H3GS31 as seed ortholog is 99%.

Group of orthologs #910. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.ramorum:99

H3B6V8              	100.00%		H3G7G0              	100.00%
Bootstrap support for H3B6V8 as seed ortholog is 100%.
Bootstrap support for H3G7G0 as seed ortholog is 99%.

Group of orthologs #911. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.ramorum:124

M3XLF8              	100.00%		H3GLX9              	100.00%
Bootstrap support for M3XLF8 as seed ortholog is 100%.
Bootstrap support for H3GLX9 as seed ortholog is 98%.

Group of orthologs #912. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.ramorum:276

M3XH91              	100.00%		H3H4U3              	100.00%
H3BAS1              	75.67%		
H3BE04              	74.82%		
H3BH26              	72.26%		
Bootstrap support for M3XH91 as seed ortholog is 100%.
Bootstrap support for H3H4U3 as seed ortholog is 100%.

Group of orthologs #913. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:276 P.ramorum:276

H2ZZT7              	100.00%		H3GQ87              	100.00%
Bootstrap support for H2ZZT7 as seed ortholog is 100%.
Bootstrap support for H3GQ87 as seed ortholog is 100%.

Group of orthologs #914. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:30

H3ANP9              	100.00%		H3GT84              	100.00%
Bootstrap support for H3ANP9 as seed ortholog is 100%.
Bootstrap support for H3GT84 as seed ortholog is 84%.

Group of orthologs #915. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.ramorum:275

H3AV88              	100.00%		H3GN45              	100.00%
Bootstrap support for H3AV88 as seed ortholog is 100%.
Bootstrap support for H3GN45 as seed ortholog is 100%.

Group of orthologs #916. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.ramorum:130

H3B189              	100.00%		H3H2A8              	100.00%
H3ADU6              	41.08%		H3GG39              	15.86%
H3AEW5              	34.06%		H3GQ58              	5.51%
H3B4R3              	21.32%		
H3B8B6              	20.78%		
H3AL09              	20.57%		
H3AXG9              	20.44%		
H3A8Z3              	16.08%		
H3BAT9              	7.49%		
H3ALY5              	6.13%		
Bootstrap support for H3B189 as seed ortholog is 100%.
Bootstrap support for H3H2A8 as seed ortholog is 98%.

Group of orthologs #917. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.ramorum:49

H2ZWZ6              	100.00%		H3GS65              	100.00%
Bootstrap support for H2ZWZ6 as seed ortholog is 100%.
Bootstrap support for H3GS65 as seed ortholog is 69%.
Alternative seed ortholog is H3GGH1 (49 bits away from this cluster)

Group of orthologs #918. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:158

H3AF82              	100.00%		H3GLC1              	100.00%
Bootstrap support for H3AF82 as seed ortholog is 100%.
Bootstrap support for H3GLC1 as seed ortholog is 99%.

Group of orthologs #919. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.ramorum:12

H3A450              	100.00%		H3H1K4              	100.00%
Bootstrap support for H3A450 as seed ortholog is 100%.
Bootstrap support for H3H1K4 as seed ortholog is 60%.
Alternative seed ortholog is H3HDF5 (12 bits away from this cluster)

Group of orthologs #920. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.ramorum:274

H3A2W0              	100.00%		H3H3F7              	100.00%
Bootstrap support for H3A2W0 as seed ortholog is 100%.
Bootstrap support for H3H3F7 as seed ortholog is 100%.

Group of orthologs #921. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.ramorum:108

H3AFP3              	100.00%		H3GVK8              	100.00%
Bootstrap support for H3AFP3 as seed ortholog is 100%.
Bootstrap support for H3GVK8 as seed ortholog is 99%.

Group of orthologs #922. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:175

H3AFD6              	100.00%		H3GZ38              	100.00%
Bootstrap support for H3AFD6 as seed ortholog is 100%.
Bootstrap support for H3GZ38 as seed ortholog is 99%.

Group of orthologs #923. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.ramorum:274

H3BE03              	100.00%		H3GG33              	100.00%
Bootstrap support for H3BE03 as seed ortholog is 100%.
Bootstrap support for H3GG33 as seed ortholog is 100%.

Group of orthologs #924. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.ramorum:25

H3AQG7              	100.00%		H3GJ24              	100.00%
H3ANP6              	44.52%		
H3BHD9              	27.95%		
Bootstrap support for H3AQG7 as seed ortholog is 99%.
Bootstrap support for H3GJ24 as seed ortholog is 70%.
Alternative seed ortholog is H3GG98 (25 bits away from this cluster)

Group of orthologs #925. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 P.ramorum:273

M3XKT6              	100.00%		H3H1T8              	100.00%
Bootstrap support for M3XKT6 as seed ortholog is 100%.
Bootstrap support for H3H1T8 as seed ortholog is 100%.

Group of orthologs #926. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.ramorum:272

H3AIQ7              	100.00%		H3HCZ5              	100.00%
H3A7A8              	71.88%		
Bootstrap support for H3AIQ7 as seed ortholog is 100%.
Bootstrap support for H3HCZ5 as seed ortholog is 100%.

Group of orthologs #927. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.ramorum:272

H2ZX08              	100.00%		H3GQP8              	100.00%
Bootstrap support for H2ZX08 as seed ortholog is 100%.
Bootstrap support for H3GQP8 as seed ortholog is 100%.

Group of orthologs #928. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:272

H3B7I4              	100.00%		H3G5V4              	100.00%
Bootstrap support for H3B7I4 as seed ortholog is 98%.
Bootstrap support for H3G5V4 as seed ortholog is 100%.

Group of orthologs #929. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:143

H3A3D2              	100.00%		H3HB29              	100.00%
Bootstrap support for H3A3D2 as seed ortholog is 99%.
Bootstrap support for H3HB29 as seed ortholog is 99%.

Group of orthologs #930. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.ramorum:272

H3BGJ4              	100.00%		H3G546              	100.00%
Bootstrap support for H3BGJ4 as seed ortholog is 100%.
Bootstrap support for H3G546 as seed ortholog is 100%.

Group of orthologs #931. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:87

M3XGZ8              	100.00%		H3GBX2              	100.00%
Bootstrap support for M3XGZ8 as seed ortholog is 90%.
Bootstrap support for H3GBX2 as seed ortholog is 97%.

Group of orthologs #932. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:271 P.ramorum:192

H3B5R5              	100.00%		H3GAD0              	100.00%
H3BB55              	30.04%		H3GA23              	38.58%
H3B391              	12.25%		
Bootstrap support for H3B5R5 as seed ortholog is 100%.
Bootstrap support for H3GAD0 as seed ortholog is 99%.

Group of orthologs #933. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.ramorum:271

H3ACD5              	100.00%		H3GYE2              	100.00%
H3AN34              	30.30%		
Bootstrap support for H3ACD5 as seed ortholog is 100%.
Bootstrap support for H3GYE2 as seed ortholog is 100%.

Group of orthologs #934. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:271

H3AGA7              	100.00%		H3G8T9              	100.00%
Bootstrap support for H3AGA7 as seed ortholog is 100%.
Bootstrap support for H3G8T9 as seed ortholog is 100%.

Group of orthologs #935. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:38

H3BBX6              	100.00%		H3G4Z5              	100.00%
Bootstrap support for H3BBX6 as seed ortholog is 93%.
Bootstrap support for H3G4Z5 as seed ortholog is 84%.

Group of orthologs #936. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:271

H3B677              	100.00%		H3GD20              	100.00%
Bootstrap support for H3B677 as seed ortholog is 100%.
Bootstrap support for H3GD20 as seed ortholog is 100%.

Group of orthologs #937. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.ramorum:2

M3XIE6              	100.00%		H3HDE6              	100.00%
H3A012              	55.92%		
H3AV22              	12.74%		
Bootstrap support for M3XIE6 as seed ortholog is 57%.
Alternative seed ortholog is H3AFT6 (10 bits away from this cluster)
Bootstrap support for H3HDE6 as seed ortholog is 61%.
Alternative seed ortholog is H3G9Q7 (2 bits away from this cluster)

Group of orthologs #938. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.ramorum:270

H3AP07              	100.00%		H3GJE0              	100.00%
H3AX70              	60.57%		
Bootstrap support for H3AP07 as seed ortholog is 100%.
Bootstrap support for H3GJE0 as seed ortholog is 100%.

Group of orthologs #939. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:270

H2ZUN6              	100.00%		H3G642              	100.00%
Bootstrap support for H2ZUN6 as seed ortholog is 100%.
Bootstrap support for H3G642 as seed ortholog is 100%.

Group of orthologs #940. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.ramorum:270

H3A9M3              	100.00%		H3G561              	100.00%
Bootstrap support for H3A9M3 as seed ortholog is 100%.
Bootstrap support for H3G561 as seed ortholog is 100%.

Group of orthologs #941. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.ramorum:270

H3AQY0              	100.00%		H3GRS6              	100.00%
Bootstrap support for H3AQY0 as seed ortholog is 100%.
Bootstrap support for H3GRS6 as seed ortholog is 100%.

Group of orthologs #942. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.ramorum:270

H3ANZ3              	100.00%		H3GWU6              	100.00%
Bootstrap support for H3ANZ3 as seed ortholog is 77%.
Bootstrap support for H3GWU6 as seed ortholog is 100%.

Group of orthologs #943. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:136

H3BBV9              	100.00%		H3G8V3              	100.00%
H3B7V4              	19.89%		
Bootstrap support for H3BBV9 as seed ortholog is 99%.
Bootstrap support for H3G8V3 as seed ortholog is 99%.

Group of orthologs #944. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.ramorum:269

H3B815              	100.00%		H3GDA2              	100.00%
H3A2D2              	33.29%		
Bootstrap support for H3B815 as seed ortholog is 100%.
Bootstrap support for H3GDA2 as seed ortholog is 100%.

Group of orthologs #945. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:145

H3B0T5              	100.00%		H3GWA9              	100.00%
H3ATR6              	7.47%		
Bootstrap support for H3B0T5 as seed ortholog is 95%.
Bootstrap support for H3GWA9 as seed ortholog is 100%.

Group of orthologs #946. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.ramorum:135

H3AWN8              	100.00%		H3G7K9              	100.00%
Bootstrap support for H3AWN8 as seed ortholog is 100%.
Bootstrap support for H3G7K9 as seed ortholog is 99%.

Group of orthologs #947. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:269

H2ZSD4              	100.00%		H3HED0              	100.00%
Bootstrap support for H2ZSD4 as seed ortholog is 100%.
Bootstrap support for H3HED0 as seed ortholog is 100%.

Group of orthologs #948. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:132

H3B1V4              	100.00%		H3HDG0              	100.00%
H3A850              	51.66%		
H3AFA5              	43.71%		
Bootstrap support for H3B1V4 as seed ortholog is 100%.
Bootstrap support for H3HDG0 as seed ortholog is 100%.

Group of orthologs #949. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.ramorum:267

H3B9P4              	100.00%		H3GXW0              	100.00%
H3A5L8              	21.14%		H3GXV6              	81.45%
H3AGX9              	19.86%		H3GXV8              	69.08%
H3B3Y7              	19.28%		H3GFL3              	48.63%
H3BCV5              	17.32%		H3GQA0              	40.67%
H3B2L2              	15.46%		H3GDW2              	18.79%
Bootstrap support for H3B9P4 as seed ortholog is 100%.
Bootstrap support for H3GXW0 as seed ortholog is 100%.

Group of orthologs #950. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:149

H3ATX2              	100.00%		H3H549              	100.00%
M3XGW1              	54.74%		
H3B4E0              	47.67%		
H3B4R4              	32.41%		
Bootstrap support for H3ATX2 as seed ortholog is 92%.
Bootstrap support for H3H549 as seed ortholog is 100%.

Group of orthologs #951. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.ramorum:194

H3A1I3              	100.00%		H3G9F5              	100.00%
Bootstrap support for H3A1I3 as seed ortholog is 99%.
Bootstrap support for H3G9F5 as seed ortholog is 100%.

Group of orthologs #952. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.ramorum:267

H3B105              	100.00%		H3G702              	100.00%
Bootstrap support for H3B105 as seed ortholog is 100%.
Bootstrap support for H3G702 as seed ortholog is 100%.

Group of orthologs #953. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:267

H3AIG9              	100.00%		H3GU85              	100.00%
Bootstrap support for H3AIG9 as seed ortholog is 99%.
Bootstrap support for H3GU85 as seed ortholog is 100%.

Group of orthologs #954. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:267

H3BDT7              	100.00%		H3G757              	100.00%
Bootstrap support for H3BDT7 as seed ortholog is 96%.
Bootstrap support for H3G757 as seed ortholog is 100%.

Group of orthologs #955. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.ramorum:267

H3B1G7              	100.00%		H3GNQ5              	100.00%
Bootstrap support for H3B1G7 as seed ortholog is 100%.
Bootstrap support for H3GNQ5 as seed ortholog is 100%.

Group of orthologs #956. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.ramorum:82

H3AND5              	100.00%		H3G969              	100.00%
H3ANI9              	80.22%		
Bootstrap support for H3AND5 as seed ortholog is 59%.
Alternative seed ortholog is H3B4G4 (7 bits away from this cluster)
Bootstrap support for H3G969 as seed ortholog is 99%.

Group of orthologs #957. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:26

H2ZW40              	100.00%		H3G595              	100.00%
Bootstrap support for H2ZW40 as seed ortholog is 99%.
Bootstrap support for H3G595 as seed ortholog is 77%.

Group of orthologs #958. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.ramorum:73

H3A4L8              	100.00%		H3H4R1              	100.00%
Bootstrap support for H3A4L8 as seed ortholog is 100%.
Bootstrap support for H3H4R1 as seed ortholog is 94%.

Group of orthologs #959. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.ramorum:266

H3BCB1              	100.00%		H3GI54              	100.00%
Bootstrap support for H3BCB1 as seed ortholog is 100%.
Bootstrap support for H3GI54 as seed ortholog is 100%.

Group of orthologs #960. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.ramorum:266

H3AG32              	100.00%		H3HBD8              	100.00%
Bootstrap support for H3AG32 as seed ortholog is 100%.
Bootstrap support for H3HBD8 as seed ortholog is 100%.

Group of orthologs #961. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.ramorum:152

H3AJ35              	100.00%		H3GJ44              	100.00%
H3A6K7              	55.02%		H3GJ43              	69.42%
H3B8N6              	50.92%		H3GZU1              	14.45%
                    	       		H3GZU0              	13.57%
Bootstrap support for H3AJ35 as seed ortholog is 56%.
Alternative seed ortholog is H3B1H0 (7 bits away from this cluster)
Bootstrap support for H3GJ44 as seed ortholog is 99%.

Group of orthologs #962. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.ramorum:20

H3AP22              	100.00%		H3GU84              	100.00%
H3ALC0              	70.55%		
H3BG19              	48.14%		
Bootstrap support for H3AP22 as seed ortholog is 100%.
Bootstrap support for H3GU84 as seed ortholog is 65%.
Alternative seed ortholog is H3GPS7 (20 bits away from this cluster)

Group of orthologs #963. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:51

H2ZW01              	100.00%		H3G5V3              	100.00%
Bootstrap support for H2ZW01 as seed ortholog is 100%.
Bootstrap support for H3G5V3 as seed ortholog is 99%.

Group of orthologs #964. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:187

H3A2V5              	100.00%		H3GCD2              	100.00%
Bootstrap support for H3A2V5 as seed ortholog is 100%.
Bootstrap support for H3GCD2 as seed ortholog is 100%.

Group of orthologs #965. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.ramorum:265

H2ZVL3              	100.00%		H3H2I2              	100.00%
Bootstrap support for H2ZVL3 as seed ortholog is 100%.
Bootstrap support for H3H2I2 as seed ortholog is 100%.

Group of orthologs #966. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.ramorum:265

H3AWI4              	100.00%		H3HC32              	100.00%
Bootstrap support for H3AWI4 as seed ortholog is 100%.
Bootstrap support for H3HC32 as seed ortholog is 100%.

Group of orthologs #967. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.ramorum:4

H2ZYK7              	100.00%		H3G7C8              	100.00%
Bootstrap support for H2ZYK7 as seed ortholog is 100%.
Bootstrap support for H3G7C8 as seed ortholog is 54%.
Alternative seed ortholog is H3G8K8 (4 bits away from this cluster)

Group of orthologs #968. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:25

H3A8I2              	100.00%		H3G5R6              	100.00%
Bootstrap support for H3A8I2 as seed ortholog is 99%.
Bootstrap support for H3G5R6 as seed ortholog is 72%.
Alternative seed ortholog is H3G7G7 (25 bits away from this cluster)

Group of orthologs #969. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.ramorum:264

H3A5V3              	100.00%		H3GV41              	100.00%
Bootstrap support for H3A5V3 as seed ortholog is 100%.
Bootstrap support for H3GV41 as seed ortholog is 100%.

Group of orthologs #970. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.ramorum:264

H3BBK7              	100.00%		H3GBV9              	100.00%
Bootstrap support for H3BBK7 as seed ortholog is 100%.
Bootstrap support for H3GBV9 as seed ortholog is 100%.

Group of orthologs #971. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 P.ramorum:263

H3AHR4              	100.00%		H3GGV7              	100.00%
H3ANV4              	51.02%		H3G533              	30.96%
Bootstrap support for H3AHR4 as seed ortholog is 100%.
Bootstrap support for H3GGV7 as seed ortholog is 100%.

Group of orthologs #972. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 P.ramorum:263

M3XH84              	100.00%		H3GE08              	100.00%
H3AR04              	15.66%		
Bootstrap support for M3XH84 as seed ortholog is 100%.
Bootstrap support for H3GE08 as seed ortholog is 100%.

Group of orthologs #973. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:263

H3AU40              	100.00%		H3H1B5              	100.00%
H3AQB6              	31.06%		
Bootstrap support for H3AU40 as seed ortholog is 63%.
Alternative seed ortholog is H3B3G1 (3 bits away from this cluster)
Bootstrap support for H3H1B5 as seed ortholog is 100%.

Group of orthologs #974. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:158

H3ALP1              	100.00%		H3HC15              	100.00%
H3AYA9              	18.28%		
Bootstrap support for H3ALP1 as seed ortholog is 96%.
Bootstrap support for H3HC15 as seed ortholog is 99%.

Group of orthologs #975. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:175

H3BHL9              	100.00%		H3G7J3              	100.00%
Bootstrap support for H3BHL9 as seed ortholog is 100%.
Bootstrap support for H3G7J3 as seed ortholog is 100%.

Group of orthologs #976. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:262

H3ANJ8              	100.00%		H3G6G2              	100.00%
                    	       		H3GB26              	100.00%
Bootstrap support for H3ANJ8 as seed ortholog is 100%.
Bootstrap support for H3G6G2 as seed ortholog is 100%.
Bootstrap support for H3GB26 as seed ortholog is 100%.

Group of orthologs #977. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.ramorum:262

H3AX99              	100.00%		H3G8I4              	100.00%
M3XGH3              	42.35%		
Bootstrap support for H3AX99 as seed ortholog is 100%.
Bootstrap support for H3G8I4 as seed ortholog is 100%.

Group of orthologs #978. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.ramorum:262

H3A7I4              	100.00%		H3G8F2              	100.00%
Bootstrap support for H3A7I4 as seed ortholog is 100%.
Bootstrap support for H3G8F2 as seed ortholog is 100%.

Group of orthologs #979. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.ramorum:262

H3AQ00              	100.00%		H3G825              	100.00%
Bootstrap support for H3AQ00 as seed ortholog is 100%.
Bootstrap support for H3G825 as seed ortholog is 100%.

Group of orthologs #980. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:262

H3ARP2              	100.00%		H3G7W6              	100.00%
Bootstrap support for H3ARP2 as seed ortholog is 100%.
Bootstrap support for H3G7W6 as seed ortholog is 100%.

Group of orthologs #981. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.ramorum:262

H3B3K0              	100.00%		H3GC32              	100.00%
Bootstrap support for H3B3K0 as seed ortholog is 100%.
Bootstrap support for H3GC32 as seed ortholog is 100%.

Group of orthologs #982. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.ramorum:262

H3BIJ9              	100.00%		H3GKA6              	100.00%
Bootstrap support for H3BIJ9 as seed ortholog is 100%.
Bootstrap support for H3GKA6 as seed ortholog is 100%.

Group of orthologs #983. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.ramorum:262

H3B8I2              	100.00%		H3GZH2              	100.00%
Bootstrap support for H3B8I2 as seed ortholog is 100%.
Bootstrap support for H3GZH2 as seed ortholog is 100%.

Group of orthologs #984. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.ramorum:261

H3BIG8              	100.00%		H3G797              	100.00%
H3AR22              	19.41%		
Bootstrap support for H3BIG8 as seed ortholog is 100%.
Bootstrap support for H3G797 as seed ortholog is 100%.

Group of orthologs #985. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.ramorum:261

H2ZT38              	100.00%		H3G943              	100.00%
Bootstrap support for H2ZT38 as seed ortholog is 100%.
Bootstrap support for H3G943 as seed ortholog is 100%.

Group of orthologs #986. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.ramorum:261

H3AF57              	100.00%		H3GME6              	100.00%
Bootstrap support for H3AF57 as seed ortholog is 100%.
Bootstrap support for H3GME6 as seed ortholog is 100%.

Group of orthologs #987. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.ramorum:261

H3BDU3              	100.00%		H3GUW0              	100.00%
Bootstrap support for H3BDU3 as seed ortholog is 100%.
Bootstrap support for H3GUW0 as seed ortholog is 100%.

Group of orthologs #988. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:95

H2ZWL7              	100.00%		H3G9T0              	100.00%
H3BAE0              	22.07%		
Bootstrap support for H2ZWL7 as seed ortholog is 99%.
Bootstrap support for H3G9T0 as seed ortholog is 99%.

Group of orthologs #989. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.ramorum:260

H3AH88              	100.00%		H3GM85              	100.00%
H3AYR4              	9.01%		
Bootstrap support for H3AH88 as seed ortholog is 100%.
Bootstrap support for H3GM85 as seed ortholog is 100%.

Group of orthologs #990. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.ramorum:260

H3AUX5              	100.00%		H3GPA5              	100.00%
H3AFN6              	37.83%		
Bootstrap support for H3AUX5 as seed ortholog is 100%.
Bootstrap support for H3GPA5 as seed ortholog is 100%.

Group of orthologs #991. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.ramorum:260

H3AHF8              	100.00%		H3GLH0              	100.00%
Bootstrap support for H3AHF8 as seed ortholog is 100%.
Bootstrap support for H3GLH0 as seed ortholog is 100%.

Group of orthologs #992. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:140

H3AYP1              	100.00%		H3GBB7              	100.00%
Bootstrap support for H3AYP1 as seed ortholog is 80%.
Bootstrap support for H3GBB7 as seed ortholog is 99%.

Group of orthologs #993. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.ramorum:260

H3AM68              	100.00%		H3GSU3              	100.00%
Bootstrap support for H3AM68 as seed ortholog is 100%.
Bootstrap support for H3GSU3 as seed ortholog is 100%.

Group of orthologs #994. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.ramorum:259

H3AFT5              	100.00%		H3GA45              	100.00%
Bootstrap support for H3AFT5 as seed ortholog is 100%.
Bootstrap support for H3GA45 as seed ortholog is 100%.

Group of orthologs #995. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:259

H3AYW0              	100.00%		H3GJC5              	100.00%
Bootstrap support for H3AYW0 as seed ortholog is 100%.
Bootstrap support for H3GJC5 as seed ortholog is 100%.

Group of orthologs #996. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.ramorum:259

H3AN50              	100.00%		H3H0Y8              	100.00%
Bootstrap support for H3AN50 as seed ortholog is 100%.
Bootstrap support for H3H0Y8 as seed ortholog is 100%.

Group of orthologs #997. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:98

M3XGU9              	100.00%		H3GA75              	100.00%
Bootstrap support for M3XGU9 as seed ortholog is 100%.
Bootstrap support for H3GA75 as seed ortholog is 99%.

Group of orthologs #998. Best score 258 bits
Score difference with first non-orthologous sequence - L.chalumnae:258 P.ramorum:258

H2ZSV5              	100.00%		H3GJP0              	100.00%
                    	       		H3GJN4              	50.25%
                    	       		H3GJN5              	49.75%
                    	       		H3GJN3              	48.60%
                    	       		H3G906              	43.19%
                    	       		H3GMN4              	8.70%
Bootstrap support for H2ZSV5 as seed ortholog is 100%.
Bootstrap support for H3GJP0 as seed ortholog is 100%.

Group of orthologs #999. Best score 258 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:258

H3ANH2              	100.00%		H3G9S5              	100.00%
Bootstrap support for H3ANH2 as seed ortholog is 100%.
Bootstrap support for H3G9S5 as seed ortholog is 100%.

Group of orthologs #1000. Best score 258 bits
Score difference with first non-orthologous sequence - L.chalumnae:258 P.ramorum:258

H3AGY0              	100.00%		H3GTC8              	100.00%
Bootstrap support for H3AGY0 as seed ortholog is 100%.
Bootstrap support for H3GTC8 as seed ortholog is 100%.

Group of orthologs #1001. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:257

H2ZYV5              	100.00%		H3GY92              	100.00%
H3AHC5              	32.02%		
H3AN94              	19.73%		
Bootstrap support for H2ZYV5 as seed ortholog is 100%.
Bootstrap support for H3GY92 as seed ortholog is 100%.

Group of orthologs #1002. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:75

H3AW71              	100.00%		H3GFH2              	100.00%
H3BH13              	47.69%		
H3AUD4              	24.96%		
Bootstrap support for H3AW71 as seed ortholog is 99%.
Bootstrap support for H3GFH2 as seed ortholog is 97%.

Group of orthologs #1003. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.ramorum:19

H3ARE9              	100.00%		H3G8M8              	100.00%
                    	       		H3G772              	13.00%
Bootstrap support for H3ARE9 as seed ortholog is 90%.
Bootstrap support for H3G8M8 as seed ortholog is 78%.

Group of orthologs #1004. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:22

H3A1W6              	100.00%		H3G9T4              	100.00%
Bootstrap support for H3A1W6 as seed ortholog is 100%.
Bootstrap support for H3G9T4 as seed ortholog is 76%.

Group of orthologs #1005. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:257

H3A2Z0              	100.00%		H3GL87              	100.00%
Bootstrap support for H3A2Z0 as seed ortholog is 99%.
Bootstrap support for H3GL87 as seed ortholog is 100%.

Group of orthologs #1006. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:257

H3A124              	100.00%		H3GXH4              	100.00%
Bootstrap support for H3A124 as seed ortholog is 100%.
Bootstrap support for H3GXH4 as seed ortholog is 100%.

Group of orthologs #1007. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.ramorum:257

H3AZ57              	100.00%		H3G7B8              	100.00%
Bootstrap support for H3AZ57 as seed ortholog is 100%.
Bootstrap support for H3G7B8 as seed ortholog is 100%.

Group of orthologs #1008. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:257

H3AAB6              	100.00%		H3GYM5              	100.00%
Bootstrap support for H3AAB6 as seed ortholog is 100%.
Bootstrap support for H3GYM5 as seed ortholog is 100%.

Group of orthologs #1009. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:257

H3BFS3              	100.00%		H3G5N0              	100.00%
Bootstrap support for H3BFS3 as seed ortholog is 100%.
Bootstrap support for H3G5N0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.ramorum:257

H3BE64              	100.00%		H3G7H3              	100.00%
Bootstrap support for H3BE64 as seed ortholog is 99%.
Bootstrap support for H3G7H3 as seed ortholog is 100%.

Group of orthologs #1011. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.ramorum:257

H3BAZ5              	100.00%		H3GAD3              	100.00%
Bootstrap support for H3BAZ5 as seed ortholog is 100%.
Bootstrap support for H3GAD3 as seed ortholog is 100%.

Group of orthologs #1012. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:257

H3AFJ5              	100.00%		H3HCB3              	100.00%
Bootstrap support for H3AFJ5 as seed ortholog is 100%.
Bootstrap support for H3HCB3 as seed ortholog is 100%.

Group of orthologs #1013. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:257

M3XHV9              	100.00%		H3GE89              	100.00%
Bootstrap support for M3XHV9 as seed ortholog is 100%.
Bootstrap support for H3GE89 as seed ortholog is 100%.

Group of orthologs #1014. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.ramorum:115

H3ATS9              	100.00%		H3HDW2              	100.00%
Bootstrap support for H3ATS9 as seed ortholog is 100%.
Bootstrap support for H3HDW2 as seed ortholog is 99%.

Group of orthologs #1015. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.ramorum:256

H3BCQ9              	100.00%		H3GGE2              	100.00%
H3BCK5              	42.23%		
H3ALF1              	29.67%		
H3ATI9              	16.12%		
Bootstrap support for H3BCQ9 as seed ortholog is 100%.
Bootstrap support for H3GGE2 as seed ortholog is 100%.

Group of orthologs #1016. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.ramorum:256

H3AYJ5              	100.00%		H3GEG8              	100.00%
H3A0X7              	5.71%		
Bootstrap support for H3AYJ5 as seed ortholog is 100%.
Bootstrap support for H3GEG8 as seed ortholog is 100%.

Group of orthologs #1017. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.ramorum:256

H3B6D4              	100.00%		H3GDN6              	100.00%
Bootstrap support for H3B6D4 as seed ortholog is 100%.
Bootstrap support for H3GDN6 as seed ortholog is 100%.

Group of orthologs #1018. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.ramorum:256

H3BCJ6              	100.00%		H3GV35              	100.00%
Bootstrap support for H3BCJ6 as seed ortholog is 100%.
Bootstrap support for H3GV35 as seed ortholog is 100%.

Group of orthologs #1019. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:2

H3A4Q6              	100.00%		H3G880              	100.00%
H3B1Y8              	30.00%		
Bootstrap support for H3A4Q6 as seed ortholog is 100%.
Bootstrap support for H3G880 as seed ortholog is 57%.
Alternative seed ortholog is H3G9N3 (2 bits away from this cluster)

Group of orthologs #1020. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:79

H3A5L2              	100.00%		H3GAR4              	100.00%
H2ZXJ6              	57.66%		
Bootstrap support for H3A5L2 as seed ortholog is 99%.
Bootstrap support for H3GAR4 as seed ortholog is 99%.

Group of orthologs #1021. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:102

H3ANM8              	100.00%		H3G9M6              	100.00%
H3BI60              	58.19%		
H3A6H8              	55.37%		
H3AAT1              	36.72%		
Bootstrap support for H3ANM8 as seed ortholog is 99%.
Bootstrap support for H3G9M6 as seed ortholog is 100%.

Group of orthologs #1022. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.ramorum:254

H3B1T9              	100.00%		H3G8P0              	100.00%
Bootstrap support for H3B1T9 as seed ortholog is 100%.
Bootstrap support for H3G8P0 as seed ortholog is 100%.

Group of orthologs #1023. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:41

H3B420              	100.00%		H3G866              	100.00%
Bootstrap support for H3B420 as seed ortholog is 98%.
Bootstrap support for H3G866 as seed ortholog is 90%.

Group of orthologs #1024. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.ramorum:254

H3BBU9              	100.00%		H3GUH8              	100.00%
Bootstrap support for H3BBU9 as seed ortholog is 100%.
Bootstrap support for H3GUH8 as seed ortholog is 100%.

Group of orthologs #1025. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.ramorum:83

H3A0E8              	100.00%		H3GN11              	100.00%
H2ZWV6              	41.03%		H3H5V1              	17.14%
                    	       		H3GN94              	16.71%
                    	       		H3H410              	12.90%
                    	       		H3GRJ5              	11.08%
Bootstrap support for H3A0E8 as seed ortholog is 100%.
Bootstrap support for H3GN11 as seed ortholog is 97%.

Group of orthologs #1026. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.ramorum:253

H3AFR1              	100.00%		H3G9D8              	100.00%
Bootstrap support for H3AFR1 as seed ortholog is 100%.
Bootstrap support for H3G9D8 as seed ortholog is 100%.

Group of orthologs #1027. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.ramorum:253

H3ALH2              	100.00%		A1XDC2              	100.00%
Bootstrap support for H3ALH2 as seed ortholog is 100%.
Bootstrap support for A1XDC2 as seed ortholog is 100%.

Group of orthologs #1028. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.ramorum:253

H3AU17              	100.00%		H3GFT4              	100.00%
Bootstrap support for H3AU17 as seed ortholog is 100%.
Bootstrap support for H3GFT4 as seed ortholog is 100%.

Group of orthologs #1029. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:56

H3A4Z4              	100.00%		H3G6M6              	100.00%
                    	       		H3G8Y3              	26.89%
Bootstrap support for H3A4Z4 as seed ortholog is 91%.
Bootstrap support for H3G6M6 as seed ortholog is 94%.

Group of orthologs #1030. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:149

H3AFE7              	100.00%		H3HCX5              	100.00%
H3A1E0              	44.90%		
Bootstrap support for H3AFE7 as seed ortholog is 99%.
Bootstrap support for H3HCX5 as seed ortholog is 99%.

Group of orthologs #1031. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:195

H2ZZE7              	100.00%		H3G981              	100.00%
Bootstrap support for H2ZZE7 as seed ortholog is 94%.
Bootstrap support for H3G981 as seed ortholog is 100%.

Group of orthologs #1032. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:252

H3B8Y2              	100.00%		H3G7S0              	100.00%
Bootstrap support for H3B8Y2 as seed ortholog is 99%.
Bootstrap support for H3G7S0 as seed ortholog is 100%.

Group of orthologs #1033. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.ramorum:252

H3BA94              	100.00%		H3GPC6              	100.00%
Bootstrap support for H3BA94 as seed ortholog is 100%.
Bootstrap support for H3GPC6 as seed ortholog is 100%.

Group of orthologs #1034. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.ramorum:251

H3B9U7              	100.00%		H3GH31              	100.00%
Bootstrap support for H3B9U7 as seed ortholog is 100%.
Bootstrap support for H3GH31 as seed ortholog is 100%.

Group of orthologs #1035. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.ramorum:251

H3BIS7              	100.00%		H3GWY1              	100.00%
Bootstrap support for H3BIS7 as seed ortholog is 100%.
Bootstrap support for H3GWY1 as seed ortholog is 100%.

Group of orthologs #1036. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.ramorum:250

H3BF07              	100.00%		H3GXC4              	100.00%
H3BFR9              	35.36%		
Bootstrap support for H3BF07 as seed ortholog is 100%.
Bootstrap support for H3GXC4 as seed ortholog is 100%.

Group of orthologs #1037. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.ramorum:250

H3AT27              	100.00%		H3HB69              	100.00%
Bootstrap support for H3AT27 as seed ortholog is 100%.
Bootstrap support for H3HB69 as seed ortholog is 100%.

Group of orthologs #1038. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.ramorum:250

H3B5B2              	100.00%		H3H394              	100.00%
Bootstrap support for H3B5B2 as seed ortholog is 100%.
Bootstrap support for H3H394 as seed ortholog is 100%.

Group of orthologs #1039. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.ramorum:5

H3B406              	100.00%		H3HC76              	100.00%
Bootstrap support for H3B406 as seed ortholog is 92%.
Bootstrap support for H3HC76 as seed ortholog is 57%.
Alternative seed ortholog is H3GB90 (5 bits away from this cluster)

Group of orthologs #1040. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:62

M3XGY2              	100.00%		H3HEH4              	100.00%
Bootstrap support for M3XGY2 as seed ortholog is 99%.
Bootstrap support for H3HEH4 as seed ortholog is 94%.

Group of orthologs #1041. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:249

H3A365              	100.00%		H3HBA5              	100.00%
H3AJA4              	66.27%		
H2ZWK8              	55.11%		
Bootstrap support for H3A365 as seed ortholog is 98%.
Bootstrap support for H3HBA5 as seed ortholog is 100%.

Group of orthologs #1042. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.ramorum:93

H3A696              	100.00%		H3G7M1              	100.00%
H3BFG6              	26.66%		
Bootstrap support for H3A696 as seed ortholog is 86%.
Bootstrap support for H3G7M1 as seed ortholog is 99%.

Group of orthologs #1043. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:190

H3AUI9              	100.00%		H3G9U2              	100.00%
                    	       		H3GUI8              	31.63%
Bootstrap support for H3AUI9 as seed ortholog is 100%.
Bootstrap support for H3G9U2 as seed ortholog is 100%.

Group of orthologs #1044. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:249

H3A7U7              	100.00%		H3GHC2              	100.00%
Bootstrap support for H3A7U7 as seed ortholog is 99%.
Bootstrap support for H3GHC2 as seed ortholog is 100%.

Group of orthologs #1045. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 P.ramorum:249

H3A081              	100.00%		H3H3M7              	100.00%
Bootstrap support for H3A081 as seed ortholog is 100%.
Bootstrap support for H3H3M7 as seed ortholog is 100%.

Group of orthologs #1046. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 P.ramorum:249

H3BAI1              	100.00%		H3GFF0              	100.00%
Bootstrap support for H3BAI1 as seed ortholog is 100%.
Bootstrap support for H3GFF0 as seed ortholog is 100%.

Group of orthologs #1047. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:121

H3BHU5              	100.00%		H3GD85              	100.00%
Bootstrap support for H3BHU5 as seed ortholog is 99%.
Bootstrap support for H3GD85 as seed ortholog is 99%.

Group of orthologs #1048. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:135

H3ANU5              	100.00%		H3G8P2              	100.00%
M3XHT1              	100.00%		
H3B917              	83.58%		
Bootstrap support for H3ANU5 as seed ortholog is 100%.
Bootstrap support for M3XHT1 as seed ortholog is 100%.
Bootstrap support for H3G8P2 as seed ortholog is 100%.

Group of orthologs #1049. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.ramorum:248

H3A5R1              	100.00%		H3G962              	100.00%
H3ADD1              	84.85%		
Bootstrap support for H3A5R1 as seed ortholog is 100%.
Bootstrap support for H3G962 as seed ortholog is 100%.

Group of orthologs #1050. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.ramorum:248

H3ACR5              	100.00%		H3G8T4              	100.00%
Bootstrap support for H3ACR5 as seed ortholog is 100%.
Bootstrap support for H3G8T4 as seed ortholog is 100%.

Group of orthologs #1051. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.ramorum:248

H3A7E0              	100.00%		H3GH86              	100.00%
Bootstrap support for H3A7E0 as seed ortholog is 100%.
Bootstrap support for H3GH86 as seed ortholog is 100%.

Group of orthologs #1052. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.ramorum:248

H3A7D7              	100.00%		H3GLU5              	100.00%
Bootstrap support for H3A7D7 as seed ortholog is 100%.
Bootstrap support for H3GLU5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.ramorum:248

H3B3U1              	100.00%		H3G5G6              	100.00%
Bootstrap support for H3B3U1 as seed ortholog is 100%.
Bootstrap support for H3G5G6 as seed ortholog is 100%.

Group of orthologs #1054. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:136

H3A4B7              	100.00%		H3HC79              	100.00%
Bootstrap support for H3A4B7 as seed ortholog is 100%.
Bootstrap support for H3HC79 as seed ortholog is 100%.

Group of orthologs #1055. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.ramorum:248

H3BET1              	100.00%		H3GNB7              	100.00%
Bootstrap support for H3BET1 as seed ortholog is 100%.
Bootstrap support for H3GNB7 as seed ortholog is 100%.

Group of orthologs #1056. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:148

H3BBF7              	100.00%		H3GR83              	100.00%
Bootstrap support for H3BBF7 as seed ortholog is 60%.
Alternative seed ortholog is H3AW12 (17 bits away from this cluster)
Bootstrap support for H3GR83 as seed ortholog is 99%.

Group of orthologs #1057. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:247

H3B9F6              	100.00%		H3H3U8              	100.00%
H3AAV5              	36.92%		H3GTY4              	18.97%
Bootstrap support for H3B9F6 as seed ortholog is 100%.
Bootstrap support for H3H3U8 as seed ortholog is 100%.

Group of orthologs #1058. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:53

H2ZV22              	100.00%		H3G4Y0              	100.00%
Bootstrap support for H2ZV22 as seed ortholog is 100%.
Bootstrap support for H3G4Y0 as seed ortholog is 96%.

Group of orthologs #1059. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:247

H2ZT33              	100.00%		H3H0F3              	100.00%
Bootstrap support for H2ZT33 as seed ortholog is 100%.
Bootstrap support for H3H0F3 as seed ortholog is 100%.

Group of orthologs #1060. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:247

H3AXH8              	100.00%		H3GE42              	100.00%
Bootstrap support for H3AXH8 as seed ortholog is 100%.
Bootstrap support for H3GE42 as seed ortholog is 100%.

Group of orthologs #1061. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:247

H3B9Z7              	100.00%		H3GKX8              	100.00%
Bootstrap support for H3B9Z7 as seed ortholog is 100%.
Bootstrap support for H3GKX8 as seed ortholog is 100%.

Group of orthologs #1062. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.ramorum:247

H3BAT3              	100.00%		H3HBS2              	100.00%
Bootstrap support for H3BAT3 as seed ortholog is 100%.
Bootstrap support for H3HBS2 as seed ortholog is 100%.

Group of orthologs #1063. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.ramorum:246

H3A328              	100.00%		H3G763              	100.00%
H3BFX5              	26.90%		
H3B527              	19.13%		
Bootstrap support for H3A328 as seed ortholog is 100%.
Bootstrap support for H3G763 as seed ortholog is 100%.

Group of orthologs #1064. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:246

H2ZT65              	100.00%		H3HAU2              	100.00%
                    	       		H3HCH5              	10.24%
Bootstrap support for H2ZT65 as seed ortholog is 92%.
Bootstrap support for H3HAU2 as seed ortholog is 100%.

Group of orthologs #1065. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.ramorum:246

H3AZ23              	100.00%		H3GKZ9              	100.00%
H3BCY0              	10.29%		
Bootstrap support for H3AZ23 as seed ortholog is 100%.
Bootstrap support for H3GKZ9 as seed ortholog is 100%.

Group of orthologs #1066. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.ramorum:246

H2ZSG8              	100.00%		H3G8K7              	100.00%
Bootstrap support for H2ZSG8 as seed ortholog is 100%.
Bootstrap support for H3G8K7 as seed ortholog is 100%.

Group of orthologs #1067. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.ramorum:11

H3B2Z2              	100.00%		H3G525              	100.00%
Bootstrap support for H3B2Z2 as seed ortholog is 97%.
Bootstrap support for H3G525 as seed ortholog is 68%.
Alternative seed ortholog is H3G611 (11 bits away from this cluster)

Group of orthologs #1068. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.ramorum:246

H3BFB4              	100.00%		H3GL04              	100.00%
Bootstrap support for H3BFB4 as seed ortholog is 100%.
Bootstrap support for H3GL04 as seed ortholog is 100%.

Group of orthologs #1069. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:69

H3A953              	100.00%		H3G853              	100.00%
H3ACP8              	35.35%		
H2ZZH4              	33.95%		
Bootstrap support for H3A953 as seed ortholog is 98%.
Bootstrap support for H3G853 as seed ortholog is 94%.

Group of orthologs #1070. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:245

H3AII2              	100.00%		H3GBZ8              	100.00%
Bootstrap support for H3AII2 as seed ortholog is 99%.
Bootstrap support for H3GBZ8 as seed ortholog is 100%.

Group of orthologs #1071. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.ramorum:245

H3B0X8              	100.00%		H3HDK0              	100.00%
Bootstrap support for H3B0X8 as seed ortholog is 100%.
Bootstrap support for H3HDK0 as seed ortholog is 100%.

Group of orthologs #1072. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.ramorum:244

H3AMX3              	100.00%		H3GIY8              	100.00%
H3BIM3              	36.95%		
Bootstrap support for H3AMX3 as seed ortholog is 100%.
Bootstrap support for H3GIY8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.ramorum:244

H3BIN9              	100.00%		H3GSU4              	100.00%
Bootstrap support for H3BIN9 as seed ortholog is 100%.
Bootstrap support for H3GSU4 as seed ortholog is 100%.

Group of orthologs #1074. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.ramorum:244

H3B9E1              	100.00%		H3HBE1              	100.00%
Bootstrap support for H3B9E1 as seed ortholog is 100%.
Bootstrap support for H3HBE1 as seed ortholog is 100%.

Group of orthologs #1075. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3AXX5              	100.00%		H3H8Y3              	100.00%
H2ZYR8              	45.95%		H3GMG3              	69.50%
                    	       		H3GU40              	64.14%
                    	       		H3H503              	59.29%
                    	       		H3GU41              	47.91%
                    	       		H3H5G0              	46.07%
                    	       		H3GQ89              	38.22%
Bootstrap support for H3AXX5 as seed ortholog is 100%.
Bootstrap support for H3H8Y3 as seed ortholog is 100%.

Group of orthologs #1076. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:188

H3AN26              	100.00%		H3GN59              	100.00%
H3B040              	21.57%		
Bootstrap support for H3AN26 as seed ortholog is 100%.
Bootstrap support for H3GN59 as seed ortholog is 100%.

Group of orthologs #1077. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3B558              	100.00%		H3GRP6              	100.00%
H3AI51              	31.86%		
Bootstrap support for H3B558 as seed ortholog is 100%.
Bootstrap support for H3GRP6 as seed ortholog is 100%.

Group of orthologs #1078. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3A0F4              	100.00%		H3G7N8              	100.00%
Bootstrap support for H3A0F4 as seed ortholog is 100%.
Bootstrap support for H3G7N8 as seed ortholog is 100%.

Group of orthologs #1079. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3AC17              	100.00%		H3G699              	100.00%
Bootstrap support for H3AC17 as seed ortholog is 100%.
Bootstrap support for H3G699 as seed ortholog is 100%.

Group of orthologs #1080. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.ramorum:189

H3AI52              	100.00%		H3G6Y5              	100.00%
Bootstrap support for H3AI52 as seed ortholog is 99%.
Bootstrap support for H3G6Y5 as seed ortholog is 100%.

Group of orthologs #1081. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3ANB9              	100.00%		H3GBK4              	100.00%
Bootstrap support for H3ANB9 as seed ortholog is 100%.
Bootstrap support for H3GBK4 as seed ortholog is 100%.

Group of orthologs #1082. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3AK09              	100.00%		H3GUR6              	100.00%
Bootstrap support for H3AK09 as seed ortholog is 100%.
Bootstrap support for H3GUR6 as seed ortholog is 100%.

Group of orthologs #1083. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3BIG7              	100.00%		H3GTT7              	100.00%
Bootstrap support for H3BIG7 as seed ortholog is 100%.
Bootstrap support for H3GTT7 as seed ortholog is 100%.

Group of orthologs #1084. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.ramorum:243

H3B542              	100.00%		H3HCT8              	100.00%
Bootstrap support for H3B542 as seed ortholog is 100%.
Bootstrap support for H3HCT8 as seed ortholog is 100%.

Group of orthologs #1085. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:103

H3A6U6              	100.00%		H3G867              	100.00%
Bootstrap support for H3A6U6 as seed ortholog is 98%.
Bootstrap support for H3G867 as seed ortholog is 98%.

Group of orthologs #1086. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:242

H3AN65              	100.00%		H3G9F0              	100.00%
Bootstrap support for H3AN65 as seed ortholog is 99%.
Bootstrap support for H3G9F0 as seed ortholog is 100%.

Group of orthologs #1087. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:242

H3AQL2              	100.00%		H3G8C7              	100.00%
Bootstrap support for H3AQL2 as seed ortholog is 100%.
Bootstrap support for H3G8C7 as seed ortholog is 100%.

Group of orthologs #1088. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:242

H3AUM4              	100.00%		H3GKH9              	100.00%
Bootstrap support for H3AUM4 as seed ortholog is 100%.
Bootstrap support for H3GKH9 as seed ortholog is 100%.

Group of orthologs #1089. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:242

H3BB46              	100.00%		H3G9X1              	100.00%
Bootstrap support for H3BB46 as seed ortholog is 100%.
Bootstrap support for H3G9X1 as seed ortholog is 100%.

Group of orthologs #1090. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:242

H3BBP1              	100.00%		H3GFF5              	100.00%
Bootstrap support for H3BBP1 as seed ortholog is 100%.
Bootstrap support for H3GFF5 as seed ortholog is 100%.

Group of orthologs #1091. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:242

H3AUA4              	100.00%		H3H461              	100.00%
Bootstrap support for H3AUA4 as seed ortholog is 100%.
Bootstrap support for H3H461 as seed ortholog is 100%.

Group of orthologs #1092. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.ramorum:242

H3BGV2              	100.00%		H3GQ98              	100.00%
Bootstrap support for H3BGV2 as seed ortholog is 100%.
Bootstrap support for H3GQ98 as seed ortholog is 100%.

Group of orthologs #1093. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.ramorum:241

H3AA87              	100.00%		H3GQR4              	100.00%
H3A994              	50.99%		H3GQE4              	9.18%
H3AV15              	45.24%		H3GJU6              	8.56%
H3APA6              	33.35%		H3GN81              	7.62%
Bootstrap support for H3AA87 as seed ortholog is 100%.
Bootstrap support for H3GQR4 as seed ortholog is 100%.

Group of orthologs #1094. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:140

H3A6U3              	100.00%		H3G4Z8              	100.00%
H3AH67              	38.40%		H3GAI8              	88.89%
                    	       		H3GAI7              	52.63%
Bootstrap support for H3A6U3 as seed ortholog is 96%.
Bootstrap support for H3G4Z8 as seed ortholog is 99%.

Group of orthologs #1095. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.ramorum:71

H3B6B2              	100.00%		H3HDC8              	100.00%
H3BAK0              	29.37%		
Bootstrap support for H3B6B2 as seed ortholog is 100%.
Bootstrap support for H3HDC8 as seed ortholog is 88%.

Group of orthologs #1096. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.ramorum:241

H3ABX2              	100.00%		H3GZE6              	100.00%
Bootstrap support for H3ABX2 as seed ortholog is 100%.
Bootstrap support for H3GZE6 as seed ortholog is 100%.

Group of orthologs #1097. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.ramorum:81

H3B5T7              	100.00%		H3GB19              	100.00%
Bootstrap support for H3B5T7 as seed ortholog is 78%.
Bootstrap support for H3GB19 as seed ortholog is 97%.

Group of orthologs #1098. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:145

H3AUB6              	100.00%		H3HBE4              	100.00%
Bootstrap support for H3AUB6 as seed ortholog is 99%.
Bootstrap support for H3HBE4 as seed ortholog is 99%.

Group of orthologs #1099. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:113

H3AP32              	100.00%		H3GSW4              	100.00%
H3ARN1              	36.90%		H3GBN3              	9.77%
                    	       		H3GZM7              	9.67%
                    	       		H3GNG0              	8.74%
                    	       		H3H8C2              	8.13%
Bootstrap support for H3AP32 as seed ortholog is 57%.
Alternative seed ortholog is H3BI43 (88 bits away from this cluster)
Bootstrap support for H3GSW4 as seed ortholog is 99%.

Group of orthologs #1100. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.ramorum:240

H3B5V9              	100.00%		H3G722              	100.00%
Bootstrap support for H3B5V9 as seed ortholog is 100%.
Bootstrap support for H3G722 as seed ortholog is 100%.

Group of orthologs #1101. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.ramorum:183

H3A5I1              	100.00%		H3GR58              	100.00%
H3A6G7              	28.61%		H3GR59              	22.37%
H3B3L2              	22.53%		H3GP17              	22.04%
M3XJF0              	22.45%		H3GQF2              	21.72%
H3AX38              	21.23%		H3H1Q0              	21.65%
H3AYL5              	20.50%		H3GR68              	19.52%
H3A115              	18.56%		
H3BG44              	18.07%		
H3AN20              	12.56%		
Bootstrap support for H3A5I1 as seed ortholog is 69%.
Alternative seed ortholog is H3BE21 (22 bits away from this cluster)
Bootstrap support for H3GR58 as seed ortholog is 99%.

Group of orthologs #1102. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.ramorum:239

H3AQY9              	100.00%		H3G793              	100.00%
Bootstrap support for H3AQY9 as seed ortholog is 100%.
Bootstrap support for H3G793 as seed ortholog is 100%.

Group of orthologs #1103. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.ramorum:81

H3ALF6              	100.00%		H3GWN5              	100.00%
Bootstrap support for H3ALF6 as seed ortholog is 98%.
Bootstrap support for H3GWN5 as seed ortholog is 98%.

Group of orthologs #1104. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.ramorum:62

H2ZUR1              	100.00%		H3H296              	100.00%
M3XHS6              	22.16%		H3H297              	69.95%
H3A425              	11.93%		H3H298              	52.73%
                    	       		H3GAN5              	42.08%
                    	       		H3GAN8              	27.05%
                    	       		H3GAN7              	26.78%
                    	       		H3GAN6              	22.68%
                    	       		H3G9Q5              	18.03%
                    	       		H3GAN4              	16.12%
                    	       		H3H9X5              	14.48%
                    	       		H3GB18              	13.11%
                    	       		H3G9Q4              	11.48%
                    	       		H3GB24              	11.20%
                    	       		H3G8F8              	11.20%
                    	       		H3GSY9              	10.11%
                    	       		H3GSY3              	8.20%
                    	       		H3G9Q6              	6.28%
                    	       		H3HCB8              	6.01%
Bootstrap support for H2ZUR1 as seed ortholog is 99%.
Bootstrap support for H3H296 as seed ortholog is 98%.

Group of orthologs #1105. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.ramorum:238

H3B5T0              	100.00%		H3G5S7              	100.00%
H3A4V8              	75.69%		
H3B232              	29.86%		
H3B5M2              	10.76%		
H3B5P3              	5.21%		
Bootstrap support for H3B5T0 as seed ortholog is 100%.
Bootstrap support for H3G5S7 as seed ortholog is 100%.

Group of orthologs #1106. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.ramorum:238

H3AUX6              	100.00%		H3GNT1              	100.00%
H3AVZ1              	57.65%		
Bootstrap support for H3AUX6 as seed ortholog is 100%.
Bootstrap support for H3GNT1 as seed ortholog is 100%.

Group of orthologs #1107. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:238

H3A2L8              	100.00%		H3GZW8              	100.00%
Bootstrap support for H3A2L8 as seed ortholog is 100%.
Bootstrap support for H3GZW8 as seed ortholog is 100%.

Group of orthologs #1108. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.ramorum:238

H3AD61              	100.00%		H3H2J7              	100.00%
Bootstrap support for H3AD61 as seed ortholog is 100%.
Bootstrap support for H3H2J7 as seed ortholog is 100%.

Group of orthologs #1109. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:238

H3ASY3              	100.00%		H3GUB3              	100.00%
Bootstrap support for H3ASY3 as seed ortholog is 81%.
Bootstrap support for H3GUB3 as seed ortholog is 100%.

Group of orthologs #1110. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.ramorum:238

H3BEJ6              	100.00%		H3GG45              	100.00%
Bootstrap support for H3BEJ6 as seed ortholog is 100%.
Bootstrap support for H3GG45 as seed ortholog is 100%.

Group of orthologs #1111. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.ramorum:238

H3BIK0              	100.00%		H3H1L7              	100.00%
Bootstrap support for H3BIK0 as seed ortholog is 100%.
Bootstrap support for H3H1L7 as seed ortholog is 100%.

Group of orthologs #1112. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:126

H3B0D3              	100.00%		H3GV37              	100.00%
H3AZZ0              	63.24%		H3GES9              	6.56%
H3AZM6              	49.95%		
H3B0S3              	41.89%		
H3AZ79              	31.82%		
H3A7B9              	22.16%		
H3A9Q8              	5.84%		
Bootstrap support for H3B0D3 as seed ortholog is 99%.
Bootstrap support for H3GV37 as seed ortholog is 98%.

Group of orthologs #1113. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:71

H3BIE1              	100.00%		H3G670              	100.00%
H3A7Z4              	34.52%		
Bootstrap support for H3BIE1 as seed ortholog is 100%.
Bootstrap support for H3G670 as seed ortholog is 99%.

Group of orthologs #1114. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.ramorum:237

H3A461              	100.00%		H3GAD8              	100.00%
Bootstrap support for H3A461 as seed ortholog is 100%.
Bootstrap support for H3GAD8 as seed ortholog is 100%.

Group of orthologs #1115. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.ramorum:237

H3B0K1              	100.00%		H3GV69              	100.00%
Bootstrap support for H3B0K1 as seed ortholog is 100%.
Bootstrap support for H3GV69 as seed ortholog is 100%.

Group of orthologs #1116. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.ramorum:71

H3B3I7              	100.00%		H3GA68              	100.00%
H3A8F0              	43.73%		
H2ZV03              	42.67%		
H3BAN1              	29.33%		
Bootstrap support for H3B3I7 as seed ortholog is 100%.
Bootstrap support for H3GA68 as seed ortholog is 98%.

Group of orthologs #1117. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:119

H3AEB1              	100.00%		H3G7P2              	100.00%
H2ZX92              	31.23%		
Bootstrap support for H3AEB1 as seed ortholog is 99%.
Bootstrap support for H3G7P2 as seed ortholog is 99%.

Group of orthologs #1118. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:28

H3AWA9              	100.00%		H3G925              	100.00%
H3ABH0              	25.57%		
Bootstrap support for H3AWA9 as seed ortholog is 89%.
Bootstrap support for H3G925 as seed ortholog is 87%.

Group of orthologs #1119. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.ramorum:86

H2ZVI3              	100.00%		H3GVP4              	100.00%
Bootstrap support for H2ZVI3 as seed ortholog is 79%.
Bootstrap support for H3GVP4 as seed ortholog is 99%.

Group of orthologs #1120. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.ramorum:236

H3B6Y8              	100.00%		H3G8T5              	100.00%
Bootstrap support for H3B6Y8 as seed ortholog is 100%.
Bootstrap support for H3G8T5 as seed ortholog is 100%.

Group of orthologs #1121. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.ramorum:236

H3BGA2              	100.00%		H3GGX4              	100.00%
Bootstrap support for H3BGA2 as seed ortholog is 100%.
Bootstrap support for H3GGX4 as seed ortholog is 100%.

Group of orthologs #1122. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.ramorum:151

H3B3P3              	100.00%		H3GUI5              	100.00%
Bootstrap support for H3B3P3 as seed ortholog is 100%.
Bootstrap support for H3GUI5 as seed ortholog is 99%.

Group of orthologs #1123. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:119

H3B6R5              	100.00%		H3GTA4              	100.00%
Bootstrap support for H3B6R5 as seed ortholog is 99%.
Bootstrap support for H3GTA4 as seed ortholog is 99%.

Group of orthologs #1124. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.ramorum:236

H3ATZ8              	100.00%		H3HDB7              	100.00%
Bootstrap support for H3ATZ8 as seed ortholog is 43%.
Alternative seed ortholog is H3AR11 (8 bits away from this cluster)
Bootstrap support for H3HDB7 as seed ortholog is 100%.

Group of orthologs #1125. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.ramorum:235

H3A3B8              	100.00%		H3GMW4              	100.00%
H3BBH2              	100.00%		
Bootstrap support for H3A3B8 as seed ortholog is 100%.
Bootstrap support for H3BBH2 as seed ortholog is 100%.
Bootstrap support for H3GMW4 as seed ortholog is 100%.

Group of orthologs #1126. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.ramorum:235

H3AUE6              	100.00%		H3GCD0              	100.00%
Bootstrap support for H3AUE6 as seed ortholog is 100%.
Bootstrap support for H3GCD0 as seed ortholog is 100%.

Group of orthologs #1127. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.ramorum:235

M3XI66              	100.00%		H3GWS9              	100.00%
Bootstrap support for M3XI66 as seed ortholog is 100%.
Bootstrap support for H3GWS9 as seed ortholog is 100%.

Group of orthologs #1128. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:91

H3AR29              	100.00%		H3H2V0              	100.00%
H3A4D5              	47.80%		
Bootstrap support for H3AR29 as seed ortholog is 93%.
Bootstrap support for H3H2V0 as seed ortholog is 99%.

Group of orthologs #1129. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.ramorum:233

H2ZTB8              	100.00%		H3H3Y4              	100.00%
Bootstrap support for H2ZTB8 as seed ortholog is 100%.
Bootstrap support for H3H3Y4 as seed ortholog is 100%.

Group of orthologs #1130. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.ramorum:233

H3BCM6              	100.00%		H3GE00              	100.00%
Bootstrap support for H3BCM6 as seed ortholog is 99%.
Bootstrap support for H3GE00 as seed ortholog is 100%.

Group of orthologs #1131. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.ramorum:233

H3AEV9              	100.00%		H3HD02              	100.00%
Bootstrap support for H3AEV9 as seed ortholog is 100%.
Bootstrap support for H3HD02 as seed ortholog is 100%.

Group of orthologs #1132. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.ramorum:232

H2ZXG2              	100.00%		H3GHI8              	100.00%
H3BH09              	32.20%		
Bootstrap support for H2ZXG2 as seed ortholog is 99%.
Bootstrap support for H3GHI8 as seed ortholog is 100%.

Group of orthologs #1133. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:170

H3AJF3              	100.00%		H3G819              	100.00%
                    	       		H3G820              	77.61%
Bootstrap support for H3AJF3 as seed ortholog is 99%.
Bootstrap support for H3G819 as seed ortholog is 100%.

Group of orthologs #1134. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.ramorum:232

H3AMC2              	100.00%		H3GG58              	100.00%
M3XL56              	29.46%		
Bootstrap support for H3AMC2 as seed ortholog is 100%.
Bootstrap support for H3GG58 as seed ortholog is 100%.

Group of orthologs #1135. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.ramorum:232

H3AFA9              	100.00%		H3GAA0              	100.00%
Bootstrap support for H3AFA9 as seed ortholog is 100%.
Bootstrap support for H3GAA0 as seed ortholog is 100%.

Group of orthologs #1136. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.ramorum:90

H3AQV2              	100.00%		H3G8B5              	100.00%
Bootstrap support for H3AQV2 as seed ortholog is 91%.
Bootstrap support for H3G8B5 as seed ortholog is 99%.

Group of orthologs #1137. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.ramorum:232

H3BG55              	100.00%		H3G7M3              	100.00%
Bootstrap support for H3BG55 as seed ortholog is 100%.
Bootstrap support for H3G7M3 as seed ortholog is 100%.

Group of orthologs #1138. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.ramorum:179

H3AVF8              	100.00%		H3HAT8              	100.00%
Bootstrap support for H3AVF8 as seed ortholog is 100%.
Bootstrap support for H3HAT8 as seed ortholog is 100%.

Group of orthologs #1139. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.ramorum:44

H3B1P2              	100.00%		H3GEM9              	100.00%
H3AX77              	72.72%		H3GYJ1              	9.08%
H3BI62              	60.26%		
Bootstrap support for H3B1P2 as seed ortholog is 74%.
Alternative seed ortholog is H3A581 (27 bits away from this cluster)
Bootstrap support for H3GEM9 as seed ortholog is 87%.

Group of orthologs #1140. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.ramorum:231

H3A140              	100.00%		H3GFZ5              	100.00%
H3A948              	46.32%		
Bootstrap support for H3A140 as seed ortholog is 100%.
Bootstrap support for H3GFZ5 as seed ortholog is 100%.

Group of orthologs #1141. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.ramorum:231

H3AXU6              	100.00%		H3H5F6              	100.00%
H3AFM2              	42.12%		
Bootstrap support for H3AXU6 as seed ortholog is 100%.
Bootstrap support for H3H5F6 as seed ortholog is 100%.

Group of orthologs #1142. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:68

H3A9V3              	100.00%		H3H398              	100.00%
Bootstrap support for H3A9V3 as seed ortholog is 95%.
Bootstrap support for H3H398 as seed ortholog is 99%.

Group of orthologs #1143. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.ramorum:231

H3BAG8              	100.00%		H3G7U4              	100.00%
Bootstrap support for H3BAG8 as seed ortholog is 100%.
Bootstrap support for H3G7U4 as seed ortholog is 100%.

Group of orthologs #1144. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.ramorum:231

H3AM62              	100.00%		H3GXE1              	100.00%
Bootstrap support for H3AM62 as seed ortholog is 100%.
Bootstrap support for H3GXE1 as seed ortholog is 100%.

Group of orthologs #1145. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.ramorum:231

H3B5P7              	100.00%		H3GI57              	100.00%
Bootstrap support for H3B5P7 as seed ortholog is 100%.
Bootstrap support for H3GI57 as seed ortholog is 100%.

Group of orthologs #1146. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:106

H3B9Z9              	100.00%		H3G5F9              	100.00%
H2ZXU1              	26.06%		
Bootstrap support for H3B9Z9 as seed ortholog is 99%.
Bootstrap support for H3G5F9 as seed ortholog is 100%.

Group of orthologs #1147. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:109

H3AMZ6              	100.00%		H3HED1              	100.00%
H3B744              	43.93%		
Bootstrap support for H3AMZ6 as seed ortholog is 100%.
Bootstrap support for H3HED1 as seed ortholog is 99%.

Group of orthologs #1148. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:230

H2ZZC9              	100.00%		H3GA29              	100.00%
Bootstrap support for H2ZZC9 as seed ortholog is 99%.
Bootstrap support for H3GA29 as seed ortholog is 100%.

Group of orthologs #1149. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:230

H3A597              	100.00%		H3GH76              	100.00%
Bootstrap support for H3A597 as seed ortholog is 100%.
Bootstrap support for H3GH76 as seed ortholog is 100%.

Group of orthologs #1150. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:230

H3A3Z4              	100.00%		H3GWV5              	100.00%
Bootstrap support for H3A3Z4 as seed ortholog is 100%.
Bootstrap support for H3GWV5 as seed ortholog is 100%.

Group of orthologs #1151. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:230

H3AQ57              	100.00%		H3GH52              	100.00%
Bootstrap support for H3AQ57 as seed ortholog is 100%.
Bootstrap support for H3GH52 as seed ortholog is 100%.

Group of orthologs #1152. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.ramorum:230

H3B1N4              	100.00%		H3GLW2              	100.00%
Bootstrap support for H3B1N4 as seed ortholog is 100%.
Bootstrap support for H3GLW2 as seed ortholog is 100%.

Group of orthologs #1153. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.ramorum:229

H3AW49              	100.00%		H3GS88              	100.00%
H3AC99              	40.43%		
Bootstrap support for H3AW49 as seed ortholog is 100%.
Bootstrap support for H3GS88 as seed ortholog is 100%.

Group of orthologs #1154. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:123

H3AF23              	100.00%		H3G9K8              	100.00%
Bootstrap support for H3AF23 as seed ortholog is 99%.
Bootstrap support for H3G9K8 as seed ortholog is 100%.

Group of orthologs #1155. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.ramorum:229

H3AIF3              	100.00%		H3GJ86              	100.00%
Bootstrap support for H3AIF3 as seed ortholog is 100%.
Bootstrap support for H3GJ86 as seed ortholog is 100%.

Group of orthologs #1156. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:55

H3BFJ0              	100.00%		H3G8K4              	100.00%
Bootstrap support for H3BFJ0 as seed ortholog is 98%.
Bootstrap support for H3G8K4 as seed ortholog is 97%.

Group of orthologs #1157. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.ramorum:228

H3B3Y4              	100.00%		H3GQX8              	100.00%
H2ZT88              	9.33%		H3GQX5              	10.16%
H3BHV0              	6.46%		
Bootstrap support for H3B3Y4 as seed ortholog is 96%.
Bootstrap support for H3GQX8 as seed ortholog is 100%.

Group of orthologs #1158. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:151

M3XK56              	100.00%		H3HDT2              	100.00%
H2ZSX5              	27.92%		
Bootstrap support for M3XK56 as seed ortholog is 99%.
Bootstrap support for H3HDT2 as seed ortholog is 99%.

Group of orthologs #1159. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:29

H3A9R5              	100.00%		H3G6S6              	100.00%
Bootstrap support for H3A9R5 as seed ortholog is 100%.
Bootstrap support for H3G6S6 as seed ortholog is 76%.

Group of orthologs #1160. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:228

H3A915              	100.00%		H3G927              	100.00%
Bootstrap support for H3A915 as seed ortholog is 100%.
Bootstrap support for H3G927 as seed ortholog is 100%.

Group of orthologs #1161. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:228

H3AU10              	100.00%		H3G5X9              	100.00%
Bootstrap support for H3AU10 as seed ortholog is 100%.
Bootstrap support for H3G5X9 as seed ortholog is 100%.

Group of orthologs #1162. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:22

H2ZW84              	100.00%		H3H3Y5              	100.00%
Bootstrap support for H2ZW84 as seed ortholog is 100%.
Bootstrap support for H3H3Y5 as seed ortholog is 69%.
Alternative seed ortholog is H3GEH0 (22 bits away from this cluster)

Group of orthologs #1163. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:228

H3AQQ6              	100.00%		H3GNM0              	100.00%
Bootstrap support for H3AQQ6 as seed ortholog is 100%.
Bootstrap support for H3GNM0 as seed ortholog is 100%.

Group of orthologs #1164. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:228

H3ARB5              	100.00%		H3HBC2              	100.00%
Bootstrap support for H3ARB5 as seed ortholog is 100%.
Bootstrap support for H3HBC2 as seed ortholog is 100%.

Group of orthologs #1165. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.ramorum:84

H3BDL2              	100.00%		H3H2X4              	100.00%
Bootstrap support for H3BDL2 as seed ortholog is 100%.
Bootstrap support for H3H2X4 as seed ortholog is 93%.

Group of orthologs #1166. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.ramorum:227

H3A7U5              	100.00%		H3G913              	100.00%
Bootstrap support for H3A7U5 as seed ortholog is 100%.
Bootstrap support for H3G913 as seed ortholog is 100%.

Group of orthologs #1167. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.ramorum:227

H3A8T8              	100.00%		H3GJT5              	100.00%
Bootstrap support for H3A8T8 as seed ortholog is 100%.
Bootstrap support for H3GJT5 as seed ortholog is 100%.

Group of orthologs #1168. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.ramorum:227

H2ZWM9              	100.00%		H3H0U9              	100.00%
Bootstrap support for H2ZWM9 as seed ortholog is 100%.
Bootstrap support for H3H0U9 as seed ortholog is 100%.

Group of orthologs #1169. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.ramorum:227

H3BAS9              	100.00%		H3G916              	100.00%
Bootstrap support for H3BAS9 as seed ortholog is 100%.
Bootstrap support for H3G916 as seed ortholog is 100%.

Group of orthologs #1170. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:227

H3BBY4              	100.00%		H3GZ56              	100.00%
Bootstrap support for H3BBY4 as seed ortholog is 95%.
Bootstrap support for H3GZ56 as seed ortholog is 100%.

Group of orthologs #1171. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.ramorum:227

M3XKL4              	100.00%		H3H6N8              	100.00%
Bootstrap support for M3XKL4 as seed ortholog is 100%.
Bootstrap support for H3H6N8 as seed ortholog is 100%.

Group of orthologs #1172. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.ramorum:103

H3AB75              	100.00%		H3HDF6              	100.00%
H3AE82              	33.21%		
M3XI70              	26.21%		
Bootstrap support for H3AB75 as seed ortholog is 100%.
Bootstrap support for H3HDF6 as seed ortholog is 98%.

Group of orthologs #1173. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.ramorum:226

H3A8B6              	100.00%		H3G5Y3              	100.00%
Bootstrap support for H3A8B6 as seed ortholog is 100%.
Bootstrap support for H3G5Y3 as seed ortholog is 100%.

Group of orthologs #1174. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:225

M3XK36              	100.00%		H3GS61              	100.00%
H3AKZ8              	44.82%		
H3A4S4              	30.71%		
Bootstrap support for M3XK36 as seed ortholog is 75%.
Bootstrap support for H3GS61 as seed ortholog is 100%.

Group of orthologs #1175. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.ramorum:225

H3AAV8              	100.00%		H3G9A8              	100.00%
                    	       		H3G8F9              	58.05%
Bootstrap support for H3AAV8 as seed ortholog is 100%.
Bootstrap support for H3G9A8 as seed ortholog is 100%.

Group of orthologs #1176. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:60

H3BFP2              	100.00%		H3GDY8              	100.00%
H3ANF9              	33.82%		
Bootstrap support for H3BFP2 as seed ortholog is 99%.
Bootstrap support for H3GDY8 as seed ortholog is 99%.

Group of orthologs #1177. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.ramorum:225

H3A0B4              	100.00%		H3GAM9              	100.00%
Bootstrap support for H3A0B4 as seed ortholog is 100%.
Bootstrap support for H3GAM9 as seed ortholog is 100%.

Group of orthologs #1178. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:225

H3ALI6              	100.00%		H3GXG4              	100.00%
Bootstrap support for H3ALI6 as seed ortholog is 99%.
Bootstrap support for H3GXG4 as seed ortholog is 100%.

Group of orthologs #1179. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:166

H3AR03              	100.00%		H3GX75              	100.00%
Bootstrap support for H3AR03 as seed ortholog is 99%.
Bootstrap support for H3GX75 as seed ortholog is 100%.

Group of orthologs #1180. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:146

H2ZZ06              	100.00%		H3HCM8              	100.00%
M3XKH6              	100.00%		
H3AM47              	57.38%		
Bootstrap support for H2ZZ06 as seed ortholog is 99%.
Bootstrap support for M3XKH6 as seed ortholog is 99%.
Bootstrap support for H3HCM8 as seed ortholog is 99%.

Group of orthologs #1181. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.ramorum:224

H3AD86              	100.00%		H3G5K1              	100.00%
Bootstrap support for H3AD86 as seed ortholog is 100%.
Bootstrap support for H3G5K1 as seed ortholog is 100%.

Group of orthologs #1182. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.ramorum:224

H3AHF7              	100.00%		H3G855              	100.00%
Bootstrap support for H3AHF7 as seed ortholog is 100%.
Bootstrap support for H3G855 as seed ortholog is 100%.

Group of orthologs #1183. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.ramorum:224

H3AZ27              	100.00%		H3GMZ0              	100.00%
Bootstrap support for H3AZ27 as seed ortholog is 100%.
Bootstrap support for H3GMZ0 as seed ortholog is 100%.

Group of orthologs #1184. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.ramorum:224

H3BD20              	100.00%		H3GK58              	100.00%
Bootstrap support for H3BD20 as seed ortholog is 100%.
Bootstrap support for H3GK58 as seed ortholog is 100%.

Group of orthologs #1185. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:223

H3AHU2              	100.00%		H3G8V5              	100.00%
H3A2K8              	15.98%		
Bootstrap support for H3AHU2 as seed ortholog is 100%.
Bootstrap support for H3G8V5 as seed ortholog is 100%.

Group of orthologs #1186. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:142

H2ZZQ6              	100.00%		H3HCG9              	100.00%
H3B2D3              	59.47%		
Bootstrap support for H2ZZQ6 as seed ortholog is 99%.
Bootstrap support for H3HCG9 as seed ortholog is 99%.

Group of orthologs #1187. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.ramorum:107

H3A0G8              	100.00%		H3GCN9              	100.00%
Bootstrap support for H3A0G8 as seed ortholog is 100%.
Bootstrap support for H3GCN9 as seed ortholog is 99%.

Group of orthologs #1188. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:133

H3A3G6              	100.00%		H3GJM6              	100.00%
Bootstrap support for H3A3G6 as seed ortholog is 100%.
Bootstrap support for H3GJM6 as seed ortholog is 100%.

Group of orthologs #1189. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.ramorum:223

H3B520              	100.00%		H3GVK2              	100.00%
Bootstrap support for H3B520 as seed ortholog is 100%.
Bootstrap support for H3GVK2 as seed ortholog is 100%.

Group of orthologs #1190. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:154

H3AUM5              	100.00%		H3HCK4              	100.00%
                    	       		H3GQA2              	56.04%
                    	       		H3HA71              	56.04%
Bootstrap support for H3AUM5 as seed ortholog is 99%.
Bootstrap support for H3HCK4 as seed ortholog is 100%.

Group of orthologs #1191. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.ramorum:63

H3A8J3              	100.00%		H3GJ16              	100.00%
Bootstrap support for H3A8J3 as seed ortholog is 60%.
Alternative seed ortholog is H3AH51 (10 bits away from this cluster)
Bootstrap support for H3GJ16 as seed ortholog is 96%.

Group of orthologs #1192. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:222

H3B2T7              	100.00%		H3G8A4              	100.00%
Bootstrap support for H3B2T7 as seed ortholog is 82%.
Bootstrap support for H3G8A4 as seed ortholog is 100%.

Group of orthologs #1193. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.ramorum:222

H3AQE0              	100.00%		H3GZX2              	100.00%
Bootstrap support for H3AQE0 as seed ortholog is 100%.
Bootstrap support for H3GZX2 as seed ortholog is 100%.

Group of orthologs #1194. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.ramorum:222

M3XKR4              	100.00%		H3G971              	100.00%
Bootstrap support for M3XKR4 as seed ortholog is 100%.
Bootstrap support for H3G971 as seed ortholog is 100%.

Group of orthologs #1195. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:118

H3ARJ2              	100.00%		H3G8B2              	100.00%
H3BBT9              	32.78%		
Bootstrap support for H3ARJ2 as seed ortholog is 100%.
Bootstrap support for H3G8B2 as seed ortholog is 100%.

Group of orthologs #1196. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.ramorum:67

H3BE11              	100.00%		H3HCE5              	100.00%
Bootstrap support for H3BE11 as seed ortholog is 100%.
Bootstrap support for H3HCE5 as seed ortholog is 87%.

Group of orthologs #1197. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:220

H3A0D5              	100.00%		H3GWP7              	100.00%
H3A3G3              	75.56%		
H3AZ24              	49.80%		
H3APG9              	27.18%		
H3BDM1              	26.57%		
H3AIP0              	20.49%		
H3AVG6              	18.76%		
H3ADM7              	16.02%		
H3AGZ5              	14.20%		
H3B9Y4              	13.39%		
H2ZWD1              	12.78%		
H3AT40              	12.37%		
H2ZUD1              	10.65%		
H3AD35              	7.30%		
H3AAN5              	5.98%		
H3AKT0              	5.88%		
H3BAZ1              	5.88%		
Bootstrap support for H3A0D5 as seed ortholog is 95%.
Bootstrap support for H3GWP7 as seed ortholog is 100%.

Group of orthologs #1198. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.ramorum:28

M3XI07              	100.00%		H3H478              	100.00%
H3A6M6              	21.26%		H3HDV1              	72.30%
M3XHF0              	19.59%		
Bootstrap support for M3XI07 as seed ortholog is 98%.
Bootstrap support for H3H478 as seed ortholog is 85%.

Group of orthologs #1199. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.ramorum:106

H2ZWF3              	100.00%		H3H449              	100.00%
H3B6E7              	11.63%		
H3AFN8              	6.84%		
Bootstrap support for H2ZWF3 as seed ortholog is 100%.
Bootstrap support for H3H449 as seed ortholog is 98%.

Group of orthologs #1200. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.ramorum:220

H3A0W1              	100.00%		H3G4Z2              	100.00%
Bootstrap support for H3A0W1 as seed ortholog is 100%.
Bootstrap support for H3G4Z2 as seed ortholog is 100%.

Group of orthologs #1201. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.ramorum:126

H3A4E5              	100.00%		H3G759              	100.00%
Bootstrap support for H3A4E5 as seed ortholog is 99%.
Bootstrap support for H3G759 as seed ortholog is 99%.

Group of orthologs #1202. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.ramorum:220

H3ATS7              	100.00%		H3G9C3              	100.00%
Bootstrap support for H3ATS7 as seed ortholog is 100%.
Bootstrap support for H3G9C3 as seed ortholog is 100%.

Group of orthologs #1203. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.ramorum:220

H3AL29              	100.00%		H3GTH9              	100.00%
Bootstrap support for H3AL29 as seed ortholog is 100%.
Bootstrap support for H3GTH9 as seed ortholog is 100%.

Group of orthologs #1204. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.ramorum:220

H3BH31              	100.00%		H3GG19              	100.00%
Bootstrap support for H3BH31 as seed ortholog is 100%.
Bootstrap support for H3GG19 as seed ortholog is 100%.

Group of orthologs #1205. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.ramorum:220

H3B2N8              	100.00%		H3GWZ9              	100.00%
Bootstrap support for H3B2N8 as seed ortholog is 100%.
Bootstrap support for H3GWZ9 as seed ortholog is 100%.

Group of orthologs #1206. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:220

H3B751              	100.00%		H3GU44              	100.00%
Bootstrap support for H3B751 as seed ortholog is 100%.
Bootstrap support for H3GU44 as seed ortholog is 100%.

Group of orthologs #1207. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:117

H3A7T6              	100.00%		H3GBG8              	100.00%
H3AS02              	66.00%		
Bootstrap support for H3A7T6 as seed ortholog is 100%.
Bootstrap support for H3GBG8 as seed ortholog is 99%.

Group of orthologs #1208. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.ramorum:219

H3AZH6              	100.00%		H3H5C8              	100.00%
                    	       		H3HDM6              	90.84%
Bootstrap support for H3AZH6 as seed ortholog is 100%.
Bootstrap support for H3H5C8 as seed ortholog is 100%.

Group of orthologs #1209. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.ramorum:25

H3ALE6              	100.00%		H3GAA9              	100.00%
Bootstrap support for H3ALE6 as seed ortholog is 100%.
Bootstrap support for H3GAA9 as seed ortholog is 75%.

Group of orthologs #1210. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.ramorum:219

H3APH1              	100.00%		H3GHG9              	100.00%
Bootstrap support for H3APH1 as seed ortholog is 100%.
Bootstrap support for H3GHG9 as seed ortholog is 100%.

Group of orthologs #1211. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:156

H3A604              	100.00%		H3H080              	100.00%
                    	       		H3H829              	99.36%
Bootstrap support for H3A604 as seed ortholog is 99%.
Bootstrap support for H3H080 as seed ortholog is 100%.

Group of orthologs #1212. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.ramorum:218

H3A9A6              	100.00%		H3GC19              	100.00%
Bootstrap support for H3A9A6 as seed ortholog is 100%.
Bootstrap support for H3GC19 as seed ortholog is 100%.

Group of orthologs #1213. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.ramorum:218

H3AQW0              	100.00%		H3GFX6              	100.00%
Bootstrap support for H3AQW0 as seed ortholog is 100%.
Bootstrap support for H3GFX6 as seed ortholog is 100%.

Group of orthologs #1214. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.ramorum:218

H3B7W6              	100.00%		H3GA82              	100.00%
Bootstrap support for H3B7W6 as seed ortholog is 100%.
Bootstrap support for H3GA82 as seed ortholog is 100%.

Group of orthologs #1215. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.ramorum:218

H3B857              	100.00%		H3GAP3              	100.00%
Bootstrap support for H3B857 as seed ortholog is 100%.
Bootstrap support for H3GAP3 as seed ortholog is 100%.

Group of orthologs #1216. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.ramorum:53

H3APW1              	100.00%		H3GYJ3              	100.00%
Bootstrap support for H3APW1 as seed ortholog is 100%.
Bootstrap support for H3GYJ3 as seed ortholog is 91%.

Group of orthologs #1217. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:217

H3APM9              	100.00%		H3GG89              	100.00%
H3AYK4              	32.24%		H3H6U6              	64.88%
H3AKR5              	26.80%		H3GGG7              	53.07%
Bootstrap support for H3APM9 as seed ortholog is 100%.
Bootstrap support for H3GG89 as seed ortholog is 100%.

Group of orthologs #1218. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:217

H3A8Y7              	100.00%		H3GM33              	100.00%
H3BDI8              	33.39%		
H3AMT3              	29.64%		
Bootstrap support for H3A8Y7 as seed ortholog is 100%.
Bootstrap support for H3GM33 as seed ortholog is 100%.

Group of orthologs #1219. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:217

H3BBH0              	100.00%		H3GPI8              	100.00%
H3ALH7              	30.88%		
Bootstrap support for H3BBH0 as seed ortholog is 100%.
Bootstrap support for H3GPI8 as seed ortholog is 100%.

Group of orthologs #1220. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:121

H2ZWS6              	100.00%		H3GDY4              	100.00%
Bootstrap support for H2ZWS6 as seed ortholog is 100%.
Bootstrap support for H3GDY4 as seed ortholog is 99%.

Group of orthologs #1221. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:217

H3A401              	100.00%		H3GII1              	100.00%
Bootstrap support for H3A401 as seed ortholog is 100%.
Bootstrap support for H3GII1 as seed ortholog is 100%.

Group of orthologs #1222. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.ramorum:217

H3AMK4              	100.00%		H3G940              	100.00%
Bootstrap support for H3AMK4 as seed ortholog is 100%.
Bootstrap support for H3G940 as seed ortholog is 100%.

Group of orthologs #1223. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:217

H3BCH4              	100.00%		H3GDX2              	100.00%
Bootstrap support for H3BCH4 as seed ortholog is 86%.
Bootstrap support for H3GDX2 as seed ortholog is 100%.

Group of orthologs #1224. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.ramorum:216

H3ATA4              	100.00%		H3H379              	100.00%
H3ATK9              	5.24%		H3G567              	39.71%
Bootstrap support for H3ATA4 as seed ortholog is 100%.
Bootstrap support for H3H379 as seed ortholog is 100%.

Group of orthologs #1225. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:216

H3BE56              	100.00%		H3GRP7              	100.00%
H2ZW63              	63.10%		
H3AV13              	57.93%		
Bootstrap support for H3BE56 as seed ortholog is 98%.
Bootstrap support for H3GRP7 as seed ortholog is 100%.

Group of orthologs #1226. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.ramorum:216

H3ASJ7              	100.00%		H3HCT7              	100.00%
H3ABL8              	42.88%		
Bootstrap support for H3ASJ7 as seed ortholog is 100%.
Bootstrap support for H3HCT7 as seed ortholog is 100%.

Group of orthologs #1227. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.ramorum:216

H2ZX41              	100.00%		H3GPG0              	100.00%
Bootstrap support for H2ZX41 as seed ortholog is 100%.
Bootstrap support for H3GPG0 as seed ortholog is 100%.

Group of orthologs #1228. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:113

M3XK55              	100.00%		H3G9X0              	100.00%
Bootstrap support for M3XK55 as seed ortholog is 97%.
Bootstrap support for H3G9X0 as seed ortholog is 100%.

Group of orthologs #1229. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:216

H3BGM9              	100.00%		H3GZH0              	100.00%
Bootstrap support for H3BGM9 as seed ortholog is 99%.
Bootstrap support for H3GZH0 as seed ortholog is 100%.

Group of orthologs #1230. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:216

M3XHJ3              	100.00%		H3GY72              	100.00%
Bootstrap support for M3XHJ3 as seed ortholog is 71%.
Alternative seed ortholog is H3ATK7 (25 bits away from this cluster)
Bootstrap support for H3GY72 as seed ortholog is 100%.

Group of orthologs #1231. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:215

H3B169              	100.00%		H3G8S1              	100.00%
H2ZYV3              	10.95%		
H2ZTW7              	6.47%		
Bootstrap support for H3B169 as seed ortholog is 99%.
Bootstrap support for H3G8S1 as seed ortholog is 100%.

Group of orthologs #1232. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:129

H3B1W4              	100.00%		H3G9W3              	100.00%
H3AAP0              	69.48%		
H2ZRP5              	29.11%		
Bootstrap support for H3B1W4 as seed ortholog is 100%.
Bootstrap support for H3G9W3 as seed ortholog is 99%.

Group of orthologs #1233. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:170

H2ZXQ5              	100.00%		H3G9X3              	100.00%
Bootstrap support for H2ZXQ5 as seed ortholog is 100%.
Bootstrap support for H3G9X3 as seed ortholog is 100%.

Group of orthologs #1234. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:215

H3A254              	100.00%		H3H3N4              	100.00%
Bootstrap support for H3A254 as seed ortholog is 100%.
Bootstrap support for H3H3N4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:215

H3B6W2              	100.00%		H3G9T8              	100.00%
Bootstrap support for H3B6W2 as seed ortholog is 100%.
Bootstrap support for H3G9T8 as seed ortholog is 100%.

Group of orthologs #1236. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:215

H3AZA0              	100.00%		H3GHT1              	100.00%
Bootstrap support for H3AZA0 as seed ortholog is 100%.
Bootstrap support for H3GHT1 as seed ortholog is 100%.

Group of orthologs #1237. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.ramorum:215

M3XIF7              	100.00%		H3GZZ4              	100.00%
Bootstrap support for M3XIF7 as seed ortholog is 100%.
Bootstrap support for H3GZZ4 as seed ortholog is 100%.

Group of orthologs #1238. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.ramorum:214

H3A723              	100.00%		H3GNC9              	100.00%
H3A0R8              	43.73%		
Bootstrap support for H3A723 as seed ortholog is 68%.
Alternative seed ortholog is H3AFS1 (13 bits away from this cluster)
Bootstrap support for H3GNC9 as seed ortholog is 100%.

Group of orthologs #1239. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.ramorum:214

H3ANA1              	100.00%		H3GD39              	100.00%
H3AXZ3              	58.23%		
Bootstrap support for H3ANA1 as seed ortholog is 100%.
Bootstrap support for H3GD39 as seed ortholog is 100%.

Group of orthologs #1240. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.ramorum:214

H3A3H8              	100.00%		H3GAK6              	100.00%
Bootstrap support for H3A3H8 as seed ortholog is 100%.
Bootstrap support for H3GAK6 as seed ortholog is 100%.

Group of orthologs #1241. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:114

H3B884              	100.00%		H3H1P5              	100.00%
H3AJD1              	27.48%		H3H1N9              	13.53%
Bootstrap support for H3B884 as seed ortholog is 99%.
Bootstrap support for H3H1P5 as seed ortholog is 99%.

Group of orthologs #1242. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.ramorum:213

H3AHT8              	100.00%		H3GM15              	100.00%
Bootstrap support for H3AHT8 as seed ortholog is 100%.
Bootstrap support for H3GM15 as seed ortholog is 100%.

Group of orthologs #1243. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.ramorum:213

H3B293              	100.00%		H3G7X6              	100.00%
Bootstrap support for H3B293 as seed ortholog is 100%.
Bootstrap support for H3G7X6 as seed ortholog is 100%.

Group of orthologs #1244. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.ramorum:213

H3BB50              	100.00%		H3GVF6              	100.00%
Bootstrap support for H3BB50 as seed ortholog is 100%.
Bootstrap support for H3GVF6 as seed ortholog is 100%.

Group of orthologs #1245. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.ramorum:212

H3BHE6              	100.00%		H3GEL4              	100.00%
                    	       		H3GEL5              	18.70%
Bootstrap support for H3BHE6 as seed ortholog is 100%.
Bootstrap support for H3GEL4 as seed ortholog is 100%.

Group of orthologs #1246. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.ramorum:43

H2ZZ59              	100.00%		H3G625              	100.00%
Bootstrap support for H2ZZ59 as seed ortholog is 100%.
Bootstrap support for H3G625 as seed ortholog is 90%.

Group of orthologs #1247. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.ramorum:212

H3AEZ7              	100.00%		H3G6D6              	100.00%
Bootstrap support for H3AEZ7 as seed ortholog is 100%.
Bootstrap support for H3G6D6 as seed ortholog is 100%.

Group of orthologs #1248. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:212

H3AHH1              	100.00%		H3G840              	100.00%
Bootstrap support for H3AHH1 as seed ortholog is 100%.
Bootstrap support for H3G840 as seed ortholog is 100%.

Group of orthologs #1249. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.ramorum:212

H3B5K8              	100.00%		H3G6D8              	100.00%
Bootstrap support for H3B5K8 as seed ortholog is 100%.
Bootstrap support for H3G6D8 as seed ortholog is 100%.

Group of orthologs #1250. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.ramorum:212

H3AQ54              	100.00%		H3GZZ0              	100.00%
Bootstrap support for H3AQ54 as seed ortholog is 100%.
Bootstrap support for H3GZZ0 as seed ortholog is 100%.

Group of orthologs #1251. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:211

H3AL27              	100.00%		H3HA61              	100.00%
                    	       		H3GJN2              	98.67%
Bootstrap support for H3AL27 as seed ortholog is 100%.
Bootstrap support for H3HA61 as seed ortholog is 100%.

Group of orthologs #1252. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:211

H2ZY81              	100.00%		H3GXV0              	100.00%
Bootstrap support for H2ZY81 as seed ortholog is 100%.
Bootstrap support for H3GXV0 as seed ortholog is 100%.

Group of orthologs #1253. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:211

H3A560              	100.00%		H3GXW6              	100.00%
Bootstrap support for H3A560 as seed ortholog is 100%.
Bootstrap support for H3GXW6 as seed ortholog is 100%.

Group of orthologs #1254. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:211

H3AXW3              	100.00%		H3GJM3              	100.00%
Bootstrap support for H3AXW3 as seed ortholog is 100%.
Bootstrap support for H3GJM3 as seed ortholog is 100%.

Group of orthologs #1255. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.ramorum:211

H3AYJ0              	100.00%		H3GNW4              	100.00%
Bootstrap support for H3AYJ0 as seed ortholog is 100%.
Bootstrap support for H3GNW4 as seed ortholog is 100%.

Group of orthologs #1256. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3AU97              	100.00%		H3GMR0              	100.00%
H3A5Y2              	12.79%		
Bootstrap support for H3AU97 as seed ortholog is 100%.
Bootstrap support for H3GMR0 as seed ortholog is 100%.

Group of orthologs #1257. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3A3Y8              	100.00%		H3GA46              	100.00%
Bootstrap support for H3A3Y8 as seed ortholog is 100%.
Bootstrap support for H3GA46 as seed ortholog is 100%.

Group of orthologs #1258. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3A587              	100.00%		H3G9Y9              	100.00%
Bootstrap support for H3A587 as seed ortholog is 100%.
Bootstrap support for H3G9Y9 as seed ortholog is 100%.

Group of orthologs #1259. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3BBF6              	100.00%		H3G786              	100.00%
Bootstrap support for H3BBF6 as seed ortholog is 100%.
Bootstrap support for H3G786 as seed ortholog is 100%.

Group of orthologs #1260. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:134

H3BH65              	100.00%		H3G849              	100.00%
Bootstrap support for H3BH65 as seed ortholog is 99%.
Bootstrap support for H3G849 as seed ortholog is 100%.

Group of orthologs #1261. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3BIK6              	100.00%		H3G8D4              	100.00%
Bootstrap support for H3BIK6 as seed ortholog is 100%.
Bootstrap support for H3G8D4 as seed ortholog is 100%.

Group of orthologs #1262. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3B3H8              	100.00%		H3GMB5              	100.00%
Bootstrap support for H3B3H8 as seed ortholog is 100%.
Bootstrap support for H3GMB5 as seed ortholog is 100%.

Group of orthologs #1263. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3AUW1              	100.00%		H3GVA1              	100.00%
Bootstrap support for H3AUW1 as seed ortholog is 100%.
Bootstrap support for H3GVA1 as seed ortholog is 100%.

Group of orthologs #1264. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.ramorum:210

H3BA96              	100.00%		H3GLK3              	100.00%
Bootstrap support for H3BA96 as seed ortholog is 100%.
Bootstrap support for H3GLK3 as seed ortholog is 100%.

Group of orthologs #1265. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.ramorum:47

H3ALP3              	100.00%		H3G613              	100.00%
H3AT07              	63.77%		
Bootstrap support for H3ALP3 as seed ortholog is 97%.
Bootstrap support for H3G613 as seed ortholog is 97%.

Group of orthologs #1266. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.ramorum:78

H3A466              	100.00%		H3GA42              	100.00%
Bootstrap support for H3A466 as seed ortholog is 92%.
Bootstrap support for H3GA42 as seed ortholog is 99%.

Group of orthologs #1267. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.ramorum:156

H2ZUL1              	100.00%		H3GS12              	100.00%
Bootstrap support for H2ZUL1 as seed ortholog is 100%.
Bootstrap support for H3GS12 as seed ortholog is 99%.

Group of orthologs #1268. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.ramorum:209

H2ZW22              	100.00%		H3GW27              	100.00%
Bootstrap support for H2ZW22 as seed ortholog is 100%.
Bootstrap support for H3GW27 as seed ortholog is 100%.

Group of orthologs #1269. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:56

H3B5G2              	9.22%		H3G4Y2              	100.00%
H3A3S4              	100.00%		H3GBZ2              	100.00%
H3B626              	7.14%		
Bootstrap support for H3A3S4 as seed ortholog is 98%.
Bootstrap support for H3G4Y2 as seed ortholog is 88%.
Bootstrap support for H3GBZ2 as seed ortholog is 89%.

Group of orthologs #1270. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:208

H3AXR7              	100.00%		H3GZK8              	100.00%
H3AYG2              	40.21%		
H3B8C2              	34.83%		
Bootstrap support for H3AXR7 as seed ortholog is 100%.
Bootstrap support for H3GZK8 as seed ortholog is 100%.

Group of orthologs #1271. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:208

H3BD74              	100.00%		H3GVQ4              	100.00%
H3AJT1              	30.15%		
Bootstrap support for H3BD74 as seed ortholog is 100%.
Bootstrap support for H3GVQ4 as seed ortholog is 100%.

Group of orthologs #1272. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:68

H3BGZ8              	100.00%		H3GSS2              	100.00%
H3B8J2              	30.24%		
Bootstrap support for H3BGZ8 as seed ortholog is 100%.
Bootstrap support for H3GSS2 as seed ortholog is 94%.

Group of orthologs #1273. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:22

H3AY94              	100.00%		H3HAS1              	100.00%
M3XH90              	51.31%		
Bootstrap support for H3AY94 as seed ortholog is 99%.
Bootstrap support for H3HAS1 as seed ortholog is 57%.
Alternative seed ortholog is H3HDE3 (22 bits away from this cluster)

Group of orthologs #1274. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:97

H3BAB0              	100.00%		H3HBL5              	100.00%
H3BHN8              	59.43%		
Bootstrap support for H3BAB0 as seed ortholog is 100%.
Bootstrap support for H3HBL5 as seed ortholog is 99%.

Group of orthologs #1275. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:208

H2ZSF2              	100.00%		H3G8U9              	100.00%
Bootstrap support for H2ZSF2 as seed ortholog is 100%.
Bootstrap support for H3G8U9 as seed ortholog is 100%.

Group of orthologs #1276. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:208

H3ARI4              	100.00%		H3GAS9              	100.00%
Bootstrap support for H3ARI4 as seed ortholog is 100%.
Bootstrap support for H3GAS9 as seed ortholog is 100%.

Group of orthologs #1277. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:208

H3AA15              	100.00%		H3GSF0              	100.00%
Bootstrap support for H3AA15 as seed ortholog is 100%.
Bootstrap support for H3GSF0 as seed ortholog is 100%.

Group of orthologs #1278. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.ramorum:208

H3B9R6              	100.00%		H3GD54              	100.00%
Bootstrap support for H3B9R6 as seed ortholog is 100%.
Bootstrap support for H3GD54 as seed ortholog is 100%.

Group of orthologs #1279. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:105

H3BCW4              	100.00%		H3GE06              	100.00%
Bootstrap support for H3BCW4 as seed ortholog is 74%.
Alternative seed ortholog is H3B1A6 (31 bits away from this cluster)
Bootstrap support for H3GE06 as seed ortholog is 99%.

Group of orthologs #1280. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:207

H3AZ11              	100.00%		H3GMF6              	100.00%
Bootstrap support for H3AZ11 as seed ortholog is 100%.
Bootstrap support for H3GMF6 as seed ortholog is 100%.

Group of orthologs #1281. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:207

H3BIS6              	100.00%		H3GA64              	100.00%
Bootstrap support for H3BIS6 as seed ortholog is 100%.
Bootstrap support for H3GA64 as seed ortholog is 100%.

Group of orthologs #1282. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.ramorum:207

H3BCU1              	100.00%		H3GJI2              	100.00%
Bootstrap support for H3BCU1 as seed ortholog is 100%.
Bootstrap support for H3GJI2 as seed ortholog is 100%.

Group of orthologs #1283. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:104

H3BEI3              	100.00%		H3GSS3              	100.00%
Bootstrap support for H3BEI3 as seed ortholog is 90%.
Bootstrap support for H3GSS3 as seed ortholog is 97%.

Group of orthologs #1284. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:7

M3XKF9              	100.00%		H3GX86              	100.00%
Bootstrap support for M3XKF9 as seed ortholog is 96%.
Bootstrap support for H3GX86 as seed ortholog is 55%.
Alternative seed ortholog is H3G907 (7 bits away from this cluster)

Group of orthologs #1285. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.ramorum:206

H3B655              	100.00%		H3G8S7              	100.00%
H3AS63              	42.48%		
Bootstrap support for H3B655 as seed ortholog is 100%.
Bootstrap support for H3G8S7 as seed ortholog is 100%.

Group of orthologs #1286. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:206

H3AND0              	100.00%		H3G6V4              	100.00%
Bootstrap support for H3AND0 as seed ortholog is 100%.
Bootstrap support for H3G6V4 as seed ortholog is 100%.

Group of orthologs #1287. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.ramorum:206

H3B394              	100.00%		H3GE46              	100.00%
Bootstrap support for H3B394 as seed ortholog is 100%.
Bootstrap support for H3GE46 as seed ortholog is 100%.

Group of orthologs #1288. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.ramorum:206

H3ANL4              	100.00%		H3GWX1              	100.00%
Bootstrap support for H3ANL4 as seed ortholog is 100%.
Bootstrap support for H3GWX1 as seed ortholog is 100%.

Group of orthologs #1289. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.ramorum:206

H3BFL7              	100.00%		H3H479              	100.00%
Bootstrap support for H3BFL7 as seed ortholog is 100%.
Bootstrap support for H3H479 as seed ortholog is 100%.

Group of orthologs #1290. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:90

H3A653              	100.00%		H3GQ39              	100.00%
H3AL00              	47.04%		
H3A708              	20.87%		
Bootstrap support for H3A653 as seed ortholog is 100%.
Bootstrap support for H3GQ39 as seed ortholog is 99%.

Group of orthologs #1291. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:205

H3AR17              	100.00%		H3GU30              	100.00%
H3ANT9              	55.82%		
H3ABP6              	54.23%		
Bootstrap support for H3AR17 as seed ortholog is 98%.
Bootstrap support for H3GU30 as seed ortholog is 100%.

Group of orthologs #1292. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:63

H3AF84              	100.00%		H3G8G7              	100.00%
H3AEE2              	34.52%		
Bootstrap support for H3AF84 as seed ortholog is 98%.
Bootstrap support for H3G8G7 as seed ortholog is 99%.

Group of orthologs #1293. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:205

H3B1G4              	100.00%		H3GAB9              	100.00%
                    	       		H3GZH9              	20.16%
Bootstrap support for H3B1G4 as seed ortholog is 100%.
Bootstrap support for H3GAB9 as seed ortholog is 100%.

Group of orthologs #1294. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:205

H3A5C4              	100.00%		H3GJM5              	100.00%
Bootstrap support for H3A5C4 as seed ortholog is 100%.
Bootstrap support for H3GJM5 as seed ortholog is 100%.

Group of orthologs #1295. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:157

H3AA58              	100.00%		H3GM72              	100.00%
Bootstrap support for H3AA58 as seed ortholog is 100%.
Bootstrap support for H3GM72 as seed ortholog is 99%.

Group of orthologs #1296. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:205

H3A1E9              	100.00%		H3H0H6              	100.00%
Bootstrap support for H3A1E9 as seed ortholog is 100%.
Bootstrap support for H3H0H6 as seed ortholog is 100%.

Group of orthologs #1297. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:205

H3A1A8              	100.00%		H3H0T8              	100.00%
Bootstrap support for H3A1A8 as seed ortholog is 100%.
Bootstrap support for H3H0T8 as seed ortholog is 100%.

Group of orthologs #1298. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:205

H3BH19              	100.00%		H3GH50              	100.00%
Bootstrap support for H3BH19 as seed ortholog is 100%.
Bootstrap support for H3GH50 as seed ortholog is 100%.

Group of orthologs #1299. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.ramorum:205

H3B346              	100.00%		H3GXX6              	100.00%
Bootstrap support for H3B346 as seed ortholog is 100%.
Bootstrap support for H3GXX6 as seed ortholog is 100%.

Group of orthologs #1300. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:48

H3A2W2              	100.00%		H3GYN9              	100.00%
H3BBU1              	81.76%		H3GUP1              	28.94%
H3ASV9              	79.77%		
H3AVW9              	67.50%		
H3AUX0              	67.33%		
H3ALF5              	66.17%		
H3AAJ7              	53.73%		
H3A121              	38.64%		
H3BCF5              	36.65%		
H3AAR7              	36.15%		
H3B069              	32.67%		
H2ZZL1              	29.35%		
H3AGR8              	27.53%		
H3B962              	27.20%		
Bootstrap support for H3A2W2 as seed ortholog is 76%.
Bootstrap support for H3GYN9 as seed ortholog is 90%.

Group of orthologs #1301. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:111

H3BBP3              	100.00%		H3GTD3              	100.00%
H3A183              	8.35%		
Bootstrap support for H3BBP3 as seed ortholog is 99%.
Bootstrap support for H3GTD3 as seed ortholog is 99%.

Group of orthologs #1302. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.ramorum:204

H3A5H1              	100.00%		H3G9Z5              	100.00%
Bootstrap support for H3A5H1 as seed ortholog is 100%.
Bootstrap support for H3G9Z5 as seed ortholog is 100%.

Group of orthologs #1303. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.ramorum:204

H3B6U1              	100.00%		H3H0K3              	100.00%
Bootstrap support for H3B6U1 as seed ortholog is 100%.
Bootstrap support for H3H0K3 as seed ortholog is 100%.

Group of orthologs #1304. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.ramorum:203

H2ZXK8              	100.00%		H3GAY1              	100.00%
                    	       		H3GAD4              	81.51%
Bootstrap support for H2ZXK8 as seed ortholog is 100%.
Bootstrap support for H3GAY1 as seed ortholog is 100%.

Group of orthologs #1305. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.ramorum:203

H3A738              	100.00%		H3GJY2              	100.00%
H3B661              	49.27%		
Bootstrap support for H3A738 as seed ortholog is 100%.
Bootstrap support for H3GJY2 as seed ortholog is 100%.

Group of orthologs #1306. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.ramorum:23

H3AF51              	100.00%		H3GZX9              	100.00%
H3BAV6              	30.42%		
Bootstrap support for H3AF51 as seed ortholog is 100%.
Bootstrap support for H3GZX9 as seed ortholog is 74%.
Alternative seed ortholog is H3G5M8 (23 bits away from this cluster)

Group of orthologs #1307. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:203

H3A7T4              	100.00%		H3GA47              	100.00%
Bootstrap support for H3A7T4 as seed ortholog is 99%.
Bootstrap support for H3GA47 as seed ortholog is 100%.

Group of orthologs #1308. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.ramorum:203

H3APL1              	100.00%		H3GH47              	100.00%
Bootstrap support for H3APL1 as seed ortholog is 100%.
Bootstrap support for H3GH47 as seed ortholog is 100%.

Group of orthologs #1309. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:99

H3BEC6              	100.00%		H3G8N8              	100.00%
Bootstrap support for H3BEC6 as seed ortholog is 99%.
Bootstrap support for H3G8N8 as seed ortholog is 99%.

Group of orthologs #1310. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:99

H3B9P8              	100.00%		H3H338              	100.00%
H2ZU71              	14.85%		
H3AW06              	12.93%		
H3ADG2              	11.29%		
Bootstrap support for H3B9P8 as seed ortholog is 98%.
Bootstrap support for H3H338 as seed ortholog is 99%.

Group of orthologs #1311. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.ramorum:99

H3AZ40              	100.00%		H3GA69              	100.00%
H3BC69              	35.10%		
H3AP43              	9.62%		
Bootstrap support for H3AZ40 as seed ortholog is 59%.
Alternative seed ortholog is H3B9J7 (4 bits away from this cluster)
Bootstrap support for H3GA69 as seed ortholog is 99%.

Group of orthologs #1312. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:60

H3AJB9              	100.00%		H3GS89              	100.00%
H3BHJ0              	68.97%		
Bootstrap support for H3AJB9 as seed ortholog is 99%.
Bootstrap support for H3GS89 as seed ortholog is 95%.

Group of orthologs #1313. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.ramorum:142

H2ZVQ9              	100.00%		H3GAS6              	100.00%
H3AQR4              	61.33%		H3G8R8              	16.97%
                    	       		H3GAT2              	7.57%
Bootstrap support for H2ZVQ9 as seed ortholog is 100%.
Bootstrap support for H3GAS6 as seed ortholog is 99%.

Group of orthologs #1314. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.ramorum:201

H3BCQ6              	100.00%		H3GNV8              	100.00%
H3AZT4              	81.46%		
Bootstrap support for H3BCQ6 as seed ortholog is 100%.
Bootstrap support for H3GNV8 as seed ortholog is 100%.

Group of orthologs #1315. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.ramorum:129

H3API9              	100.00%		H3GA88              	100.00%
Bootstrap support for H3API9 as seed ortholog is 94%.
Bootstrap support for H3GA88 as seed ortholog is 99%.

Group of orthologs #1316. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.ramorum:201

H3AZR3              	100.00%		H3GGD2              	100.00%
Bootstrap support for H3AZR3 as seed ortholog is 71%.
Alternative seed ortholog is H3B1E9 (24 bits away from this cluster)
Bootstrap support for H3GGD2 as seed ortholog is 100%.

Group of orthologs #1317. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.ramorum:201

H3AX24              	100.00%		H3GLG9              	100.00%
Bootstrap support for H3AX24 as seed ortholog is 100%.
Bootstrap support for H3GLG9 as seed ortholog is 100%.

Group of orthologs #1318. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:64

H3AJV0              	100.00%		H3H1Q7              	100.00%
Bootstrap support for H3AJV0 as seed ortholog is 100%.
Bootstrap support for H3H1Q7 as seed ortholog is 99%.

Group of orthologs #1319. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.ramorum:201

H3AFY8              	100.00%		H3HB82              	100.00%
Bootstrap support for H3AFY8 as seed ortholog is 100%.
Bootstrap support for H3HB82 as seed ortholog is 100%.

Group of orthologs #1320. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:154

H3AAN0              	100.00%		H3H1T3              	100.00%
                    	       		H3HE55              	44.49%
Bootstrap support for H3AAN0 as seed ortholog is 99%.
Bootstrap support for H3H1T3 as seed ortholog is 100%.

Group of orthologs #1321. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:200

H3A801              	100.00%		H3G9P1              	100.00%
Bootstrap support for H3A801 as seed ortholog is 99%.
Bootstrap support for H3G9P1 as seed ortholog is 100%.

Group of orthologs #1322. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:200

H2ZVB2              	100.00%		H3GYI8              	100.00%
Bootstrap support for H2ZVB2 as seed ortholog is 99%.
Bootstrap support for H3GYI8 as seed ortholog is 100%.

Group of orthologs #1323. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.ramorum:200

H3B6D3              	100.00%		H3G9L4              	100.00%
Bootstrap support for H3B6D3 as seed ortholog is 100%.
Bootstrap support for H3G9L4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.ramorum:200

H3B8D6              	100.00%		H3GAM0              	100.00%
Bootstrap support for H3B8D6 as seed ortholog is 88%.
Bootstrap support for H3GAM0 as seed ortholog is 100%.

Group of orthologs #1325. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.ramorum:200

H3AZA8              	100.00%		H3GTI3              	100.00%
Bootstrap support for H3AZA8 as seed ortholog is 100%.
Bootstrap support for H3GTI3 as seed ortholog is 100%.

Group of orthologs #1326. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.ramorum:48

H3ACB8              	100.00%		H3GTD1              	100.00%
H3AN70              	50.08%		
H3AXL0              	8.65%		
Bootstrap support for H3ACB8 as seed ortholog is 83%.
Bootstrap support for H3GTD1 as seed ortholog is 87%.

Group of orthologs #1327. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.ramorum:199

H3AGN4              	100.00%		H3G9W8              	100.00%
Bootstrap support for H3AGN4 as seed ortholog is 100%.
Bootstrap support for H3G9W8 as seed ortholog is 100%.

Group of orthologs #1328. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.ramorum:199

H3BA19              	100.00%		H3GED7              	100.00%
Bootstrap support for H3BA19 as seed ortholog is 100%.
Bootstrap support for H3GED7 as seed ortholog is 100%.

Group of orthologs #1329. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:199

H3B417              	100.00%		H3GU81              	100.00%
Bootstrap support for H3B417 as seed ortholog is 99%.
Bootstrap support for H3GU81 as seed ortholog is 100%.

Group of orthologs #1330. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3AGL2              	100.00%		H3GGH4              	100.00%
H3BHF8              	27.32%		
H3AJ39              	8.41%		
H3BIN2              	6.37%		
H3AIM4              	5.36%		
Bootstrap support for H3AGL2 as seed ortholog is 100%.
Bootstrap support for H3GGH4 as seed ortholog is 100%.

Group of orthologs #1331. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.ramorum:121

H3A1W1              	100.00%		H3GYT1              	100.00%
H3AWW4              	45.26%		
H3BG96              	19.32%		
Bootstrap support for H3A1W1 as seed ortholog is 32%.
Alternative seed ortholog is H3B3J5 (19 bits away from this cluster)
Bootstrap support for H3GYT1 as seed ortholog is 99%.

Group of orthologs #1332. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3APW7              	100.00%		H3G8H6              	100.00%
H2ZRM6              	21.85%		
Bootstrap support for H3APW7 as seed ortholog is 100%.
Bootstrap support for H3G8H6 as seed ortholog is 100%.

Group of orthologs #1333. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3ANG1              	100.00%		H3GAV6              	100.00%
H3AUP4              	58.99%		
Bootstrap support for H3ANG1 as seed ortholog is 100%.
Bootstrap support for H3GAV6 as seed ortholog is 100%.

Group of orthologs #1334. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.ramorum:101

H3B8F7              	100.00%		H3GA22              	100.00%
M3XGK5              	78.34%		
Bootstrap support for H3B8F7 as seed ortholog is 79%.
Bootstrap support for H3GA22 as seed ortholog is 99%.

Group of orthologs #1335. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:49

H3A2A3              	100.00%		H3HDV3              	100.00%
H2ZUV8              	25.00%		
Bootstrap support for H3A2A3 as seed ortholog is 100%.
Bootstrap support for H3HDV3 as seed ortholog is 57%.
Alternative seed ortholog is H3GWS5 (49 bits away from this cluster)

Group of orthologs #1336. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3AYF9              	100.00%		H3GWG2              	100.00%
H2ZWA0              	41.10%		
Bootstrap support for H3AYF9 as seed ortholog is 100%.
Bootstrap support for H3GWG2 as seed ortholog is 100%.

Group of orthologs #1337. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3A7J5              	100.00%		H3G8M5              	100.00%
Bootstrap support for H3A7J5 as seed ortholog is 100%.
Bootstrap support for H3G8M5 as seed ortholog is 100%.

Group of orthologs #1338. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3AJB8              	100.00%		H3G9W2              	100.00%
Bootstrap support for H3AJB8 as seed ortholog is 100%.
Bootstrap support for H3G9W2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3A5X8              	100.00%		H3GPB1              	100.00%
Bootstrap support for H3A5X8 as seed ortholog is 100%.
Bootstrap support for H3GPB1 as seed ortholog is 100%.

Group of orthologs #1340. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3A6H3              	100.00%		H3H4U2              	100.00%
Bootstrap support for H3A6H3 as seed ortholog is 100%.
Bootstrap support for H3H4U2 as seed ortholog is 100%.

Group of orthologs #1341. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:198

H3ASV7              	100.00%		H3H0M0              	100.00%
Bootstrap support for H3ASV7 as seed ortholog is 98%.
Bootstrap support for H3H0M0 as seed ortholog is 100%.

Group of orthologs #1342. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.ramorum:198

H3B4R0              	100.00%		H3GQT3              	100.00%
Bootstrap support for H3B4R0 as seed ortholog is 100%.
Bootstrap support for H3GQT3 as seed ortholog is 100%.

Group of orthologs #1343. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3A0C5              	100.00%		H3GRT9              	100.00%
H3AV39              	51.27%		
H3AC46              	44.65%		
Bootstrap support for H3A0C5 as seed ortholog is 100%.
Bootstrap support for H3GRT9 as seed ortholog is 100%.

Group of orthologs #1344. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:120

H3AGI3              	100.00%		H3G5G1              	100.00%
H3A858              	92.14%		
Bootstrap support for H3AGI3 as seed ortholog is 99%.
Bootstrap support for H3G5G1 as seed ortholog is 100%.

Group of orthologs #1345. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3AMI7              	100.00%		H3GMY0              	100.00%
H3AVP3              	100.00%		
Bootstrap support for H3AMI7 as seed ortholog is 100%.
Bootstrap support for H3AVP3 as seed ortholog is 100%.
Bootstrap support for H3GMY0 as seed ortholog is 100%.

Group of orthologs #1346. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:42

M3XK38              	100.00%		H3H0X6              	100.00%
                    	       		H3HE22              	92.76%
Bootstrap support for M3XK38 as seed ortholog is 100%.
Bootstrap support for H3H0X6 as seed ortholog is 80%.

Group of orthologs #1347. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3A4V6              	100.00%		H3GAQ2              	100.00%
Bootstrap support for H3A4V6 as seed ortholog is 100%.
Bootstrap support for H3GAQ2 as seed ortholog is 100%.

Group of orthologs #1348. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3AAY7              	100.00%		H3G8C2              	100.00%
Bootstrap support for H3AAY7 as seed ortholog is 100%.
Bootstrap support for H3G8C2 as seed ortholog is 100%.

Group of orthologs #1349. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3BI71              	100.00%		H3G8Q6              	100.00%
Bootstrap support for H3BI71 as seed ortholog is 100%.
Bootstrap support for H3G8Q6 as seed ortholog is 100%.

Group of orthologs #1350. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3BAM5              	100.00%		H3GLW4              	100.00%
Bootstrap support for H3BAM5 as seed ortholog is 100%.
Bootstrap support for H3GLW4 as seed ortholog is 100%.

Group of orthologs #1351. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.ramorum:197

H3B2M7              	100.00%		H3GVW3              	100.00%
Bootstrap support for H3B2M7 as seed ortholog is 100%.
Bootstrap support for H3GVW3 as seed ortholog is 100%.

Group of orthologs #1352. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:33

H3A7S0              	100.00%		H3GVG5              	100.00%
                    	       		H3H6B0              	100.00%
                    	       		H3GHI1              	49.62%
Bootstrap support for H3A7S0 as seed ortholog is 98%.
Bootstrap support for H3GVG5 as seed ortholog is 82%.
Bootstrap support for H3H6B0 as seed ortholog is 79%.

Group of orthologs #1353. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.ramorum:196

H2ZWR6              	100.00%		H3HAZ0              	100.00%
H3A574              	100.00%		H3GCK9              	58.28%
Bootstrap support for H2ZWR6 as seed ortholog is 100%.
Bootstrap support for H3A574 as seed ortholog is 100%.
Bootstrap support for H3HAZ0 as seed ortholog is 100%.

Group of orthologs #1354. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.ramorum:196

H3BA10              	100.00%		H3GNT3              	100.00%
H3AI08              	23.02%		
H3AG72              	16.70%		
Bootstrap support for H3BA10 as seed ortholog is 99%.
Bootstrap support for H3GNT3 as seed ortholog is 100%.

Group of orthologs #1355. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:196

H3ARJ8              	100.00%		H3G7A1              	100.00%
Bootstrap support for H3ARJ8 as seed ortholog is 100%.
Bootstrap support for H3G7A1 as seed ortholog is 100%.

Group of orthologs #1356. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.ramorum:196

H3AJ99              	100.00%		H3GHZ9              	100.00%
Bootstrap support for H3AJ99 as seed ortholog is 100%.
Bootstrap support for H3GHZ9 as seed ortholog is 100%.

Group of orthologs #1357. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.ramorum:196

H3B0Y4              	100.00%		H3GAD2              	100.00%
Bootstrap support for H3B0Y4 as seed ortholog is 100%.
Bootstrap support for H3GAD2 as seed ortholog is 100%.

Group of orthologs #1358. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:137

H3B6J8              	100.00%		H3G9P0              	100.00%
Bootstrap support for H3B6J8 as seed ortholog is 100%.
Bootstrap support for H3G9P0 as seed ortholog is 100%.

Group of orthologs #1359. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.ramorum:196

H3AR67              	100.00%		H3GY17              	100.00%
Bootstrap support for H3AR67 as seed ortholog is 100%.
Bootstrap support for H3GY17 as seed ortholog is 100%.

Group of orthologs #1360. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.ramorum:196

H3BD94              	100.00%		H3GEA6              	100.00%
Bootstrap support for H3BD94 as seed ortholog is 100%.
Bootstrap support for H3GEA6 as seed ortholog is 100%.

Group of orthologs #1361. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.ramorum:196

H3AZ19              	100.00%		H3GXU2              	100.00%
Bootstrap support for H3AZ19 as seed ortholog is 100%.
Bootstrap support for H3GXU2 as seed ortholog is 100%.

Group of orthologs #1362. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.ramorum:195

H3B3G2              	100.00%		H3GEQ3              	100.00%
H3B6X6              	32.30%		
Bootstrap support for H3B3G2 as seed ortholog is 100%.
Bootstrap support for H3GEQ3 as seed ortholog is 100%.

Group of orthologs #1363. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:88

H3BDI2              	100.00%		H3GSC6              	100.00%
H3A3L7              	49.70%		
Bootstrap support for H3BDI2 as seed ortholog is 95%.
Bootstrap support for H3GSC6 as seed ortholog is 98%.

Group of orthologs #1364. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:195

H2ZYG8              	100.00%		H3G785              	100.00%
Bootstrap support for H2ZYG8 as seed ortholog is 100%.
Bootstrap support for H3G785 as seed ortholog is 100%.

Group of orthologs #1365. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.ramorum:46

H3A9G7              	100.00%		H3GKT6              	100.00%
Bootstrap support for H3A9G7 as seed ortholog is 69%.
Alternative seed ortholog is H3AQP2 (19 bits away from this cluster)
Bootstrap support for H3GKT6 as seed ortholog is 87%.

Group of orthologs #1366. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:195

H3AAF0              	100.00%		H3H248              	100.00%
Bootstrap support for H3AAF0 as seed ortholog is 98%.
Bootstrap support for H3H248 as seed ortholog is 100%.

Group of orthologs #1367. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.ramorum:194

H3BEG5              	100.00%		H3G610              	100.00%
M3XI53              	25.60%		
Bootstrap support for H3BEG5 as seed ortholog is 100%.
Bootstrap support for H3G610 as seed ortholog is 100%.

Group of orthologs #1368. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.ramorum:194

H2ZUW6              	100.00%		H3GF21              	100.00%
Bootstrap support for H2ZUW6 as seed ortholog is 100%.
Bootstrap support for H3GF21 as seed ortholog is 100%.

Group of orthologs #1369. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:76

H3B890              	100.00%		H3G8P5              	100.00%
Bootstrap support for H3B890 as seed ortholog is 100%.
Bootstrap support for H3G8P5 as seed ortholog is 99%.

Group of orthologs #1370. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.ramorum:194

H3B8C1              	100.00%		H3GSN7              	100.00%
Bootstrap support for H3B8C1 as seed ortholog is 100%.
Bootstrap support for H3GSN7 as seed ortholog is 100%.

Group of orthologs #1371. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:193

H3API5              	100.00%		H3GN73              	100.00%
H3B2C2              	36.34%		H3GN83              	53.81%
                    	       		H3GN80              	38.85%
Bootstrap support for H3API5 as seed ortholog is 98%.
Bootstrap support for H3GN73 as seed ortholog is 100%.

Group of orthologs #1372. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H3A926              	100.00%		H3GHL0              	100.00%
H3BCU4              	33.47%		
H3ANI3              	31.40%		
Bootstrap support for H3A926 as seed ortholog is 100%.
Bootstrap support for H3GHL0 as seed ortholog is 100%.

Group of orthologs #1373. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.ramorum:38

H3B907              	100.00%		H3GDW0              	100.00%
H3AH13              	52.24%		
H2ZUG3              	27.53%		
Bootstrap support for H3B907 as seed ortholog is 68%.
Alternative seed ortholog is H3ARI8 (15 bits away from this cluster)
Bootstrap support for H3GDW0 as seed ortholog is 83%.

Group of orthologs #1374. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:4

H3AA08              	100.00%		H3G8V0              	100.00%
H3BEM9              	6.29%		
Bootstrap support for H3AA08 as seed ortholog is 99%.
Bootstrap support for H3G8V0 as seed ortholog is 56%.
Alternative seed ortholog is H3HCR6 (4 bits away from this cluster)

Group of orthologs #1375. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:33

H3A661              	100.00%		H3H1Q6              	100.00%
                    	       		H3GUF2              	12.78%
Bootstrap support for H3A661 as seed ortholog is 97%.
Bootstrap support for H3H1Q6 as seed ortholog is 77%.

Group of orthologs #1376. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H3AGU9              	100.00%		H3H388              	100.00%
H3B5Y7              	26.08%		
Bootstrap support for H3AGU9 as seed ortholog is 100%.
Bootstrap support for H3H388 as seed ortholog is 100%.

Group of orthologs #1377. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:193

H3BFH6              	100.00%		H3GI38              	100.00%
H3A0F3              	19.78%		
Bootstrap support for H3BFH6 as seed ortholog is 99%.
Bootstrap support for H3GI38 as seed ortholog is 100%.

Group of orthologs #1378. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H2ZT96              	100.00%		H3GS44              	100.00%
Bootstrap support for H2ZT96 as seed ortholog is 100%.
Bootstrap support for H3GS44 as seed ortholog is 100%.

Group of orthologs #1379. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H3A4L5              	100.00%		H3GT45              	100.00%
Bootstrap support for H3A4L5 as seed ortholog is 100%.
Bootstrap support for H3GT45 as seed ortholog is 100%.

Group of orthologs #1380. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:76

H3A3D7              	100.00%		H3GY76              	100.00%
Bootstrap support for H3A3D7 as seed ortholog is 100%.
Bootstrap support for H3GY76 as seed ortholog is 98%.

Group of orthologs #1381. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:116

H3AL25              	100.00%		H3GKK6              	100.00%
Bootstrap support for H3AL25 as seed ortholog is 99%.
Bootstrap support for H3GKK6 as seed ortholog is 99%.

Group of orthologs #1382. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H3AMR2              	100.00%		H3GL40              	100.00%
Bootstrap support for H3AMR2 as seed ortholog is 100%.
Bootstrap support for H3GL40 as seed ortholog is 100%.

Group of orthologs #1383. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H3B914              	100.00%		H3GE58              	100.00%
Bootstrap support for H3B914 as seed ortholog is 100%.
Bootstrap support for H3GE58 as seed ortholog is 100%.

Group of orthologs #1384. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.ramorum:193

H3BAC2              	100.00%		H3HC67              	100.00%
Bootstrap support for H3BAC2 as seed ortholog is 100%.
Bootstrap support for H3HC67 as seed ortholog is 100%.

Group of orthologs #1385. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.ramorum:61

H3B270              	100.00%		H3GBA3              	100.00%
H2ZXJ7              	100.00%		H3G8M0              	100.00%
H3BEA6              	35.16%		H3GHJ3              	66.19%
H3AJ74              	32.53%		H3G8Z3              	9.07%
H3A5P5              	28.57%		H3G9G3              	8.76%
H3AXM0              	20.44%		H3G9M9              	8.35%
H2ZSJ0              	8.89%		
Bootstrap support for H3B270 as seed ortholog is 84%.
Bootstrap support for H2ZXJ7 as seed ortholog is 73%.
Alternative seed ortholog is I6L4Q1 (37 bits away from this cluster)
Bootstrap support for H3GBA3 as seed ortholog is 93%.
Bootstrap support for H3G8M0 as seed ortholog is 85%.

Group of orthologs #1386. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:192

H3B152              	100.00%		H3GE37              	100.00%
H3AI14              	49.09%		
H3B0L4              	45.29%		
H3ASZ3              	22.64%		
H3B3G3              	16.36%		
Bootstrap support for H3B152 as seed ortholog is 99%.
Bootstrap support for H3GE37 as seed ortholog is 100%.

Group of orthologs #1387. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:91

H3A2X5              	100.00%		H3G721              	100.00%
H2ZV00              	22.40%		
Bootstrap support for H3A2X5 as seed ortholog is 80%.
Bootstrap support for H3G721 as seed ortholog is 99%.

Group of orthologs #1388. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3AJS5              	100.00%		H3GN50              	100.00%
H3BCC4              	67.31%		
Bootstrap support for H3AJS5 as seed ortholog is 100%.
Bootstrap support for H3GN50 as seed ortholog is 100%.

Group of orthologs #1389. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3AFC4              	100.00%		H3HB24              	100.00%
H3BE43              	39.54%		
Bootstrap support for H3AFC4 as seed ortholog is 100%.
Bootstrap support for H3HB24 as seed ortholog is 100%.

Group of orthologs #1390. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3BHD7              	100.00%		H3GLE7              	100.00%
H2ZYJ2              	26.20%		
Bootstrap support for H3BHD7 as seed ortholog is 100%.
Bootstrap support for H3GLE7 as seed ortholog is 100%.

Group of orthologs #1391. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3A6G6              	100.00%		H3G9F9              	100.00%
Bootstrap support for H3A6G6 as seed ortholog is 100%.
Bootstrap support for H3G9F9 as seed ortholog is 100%.

Group of orthologs #1392. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:192

H3AMA5              	100.00%		H3G7U0              	100.00%
Bootstrap support for H3AMA5 as seed ortholog is 82%.
Bootstrap support for H3G7U0 as seed ortholog is 100%.

Group of orthologs #1393. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3BI06              	100.00%		H3GBM4              	100.00%
Bootstrap support for H3BI06 as seed ortholog is 100%.
Bootstrap support for H3GBM4 as seed ortholog is 100%.

Group of orthologs #1394. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3AQQ9              	100.00%		H3H5G1              	100.00%
Bootstrap support for H3AQQ9 as seed ortholog is 100%.
Bootstrap support for H3H5G1 as seed ortholog is 100%.

Group of orthologs #1395. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3BC77              	100.00%		H3GUX3              	100.00%
Bootstrap support for H3BC77 as seed ortholog is 100%.
Bootstrap support for H3GUX3 as seed ortholog is 100%.

Group of orthologs #1396. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.ramorum:192

H3BFT6              	100.00%		H3H534              	100.00%
Bootstrap support for H3BFT6 as seed ortholog is 100%.
Bootstrap support for H3H534 as seed ortholog is 100%.

Group of orthologs #1397. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:191

H3BE02              	100.00%		H3GAL3              	100.00%
H3B8N0              	46.51%		H3GAL2              	87.06%
H3A6T6              	33.72%		
H3A0A2              	24.42%		
Bootstrap support for H3BE02 as seed ortholog is 97%.
Bootstrap support for H3GAL3 as seed ortholog is 100%.

Group of orthologs #1398. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:105

M3XHX8              	100.00%		H3HAU7              	100.00%
H3AR77              	39.69%		
H3ARX4              	34.51%		
Bootstrap support for M3XHX8 as seed ortholog is 100%.
Bootstrap support for H3HAU7 as seed ortholog is 99%.

Group of orthologs #1399. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.ramorum:84

H2ZWX8              	100.00%		H3GCL9              	100.00%
H3AWS9              	45.62%		
Bootstrap support for H2ZWX8 as seed ortholog is 78%.
Bootstrap support for H3GCL9 as seed ortholog is 98%.

Group of orthologs #1400. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:191

H3A0Q2              	100.00%		H3G9U3              	100.00%
                    	       		H3G9U6              	59.78%
Bootstrap support for H3A0Q2 as seed ortholog is 100%.
Bootstrap support for H3G9U3 as seed ortholog is 100%.

Group of orthologs #1401. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:90

H2ZYC1              	100.00%		H3GU33              	100.00%
H3B821              	29.96%		
Bootstrap support for H2ZYC1 as seed ortholog is 89%.
Bootstrap support for H3GU33 as seed ortholog is 97%.

Group of orthologs #1402. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:191

H3ANF6              	100.00%		H3GRL7              	100.00%
                    	       		H3GYG6              	6.42%
Bootstrap support for H3ANF6 as seed ortholog is 100%.
Bootstrap support for H3GRL7 as seed ortholog is 100%.

Group of orthologs #1403. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:191

H3B516              	100.00%		H3GGK3              	100.00%
H2ZYR2              	48.06%		
Bootstrap support for H3B516 as seed ortholog is 100%.
Bootstrap support for H3GGK3 as seed ortholog is 100%.

Group of orthologs #1404. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:191

M3XK17              	100.00%		H3GH48              	100.00%
H3A264              	10.42%		
Bootstrap support for M3XK17 as seed ortholog is 100%.
Bootstrap support for H3GH48 as seed ortholog is 100%.

Group of orthologs #1405. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:191

H3ASH8              	100.00%		H3G8V6              	100.00%
Bootstrap support for H3ASH8 as seed ortholog is 100%.
Bootstrap support for H3G8V6 as seed ortholog is 100%.

Group of orthologs #1406. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.ramorum:191

H3AAX8              	100.00%		H3HCD6              	100.00%
Bootstrap support for H3AAX8 as seed ortholog is 100%.
Bootstrap support for H3HCD6 as seed ortholog is 100%.

Group of orthologs #1407. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.ramorum:1

M3XLC8              	100.00%		H3GTV2              	100.00%
Bootstrap support for M3XLC8 as seed ortholog is 82%.
Bootstrap support for H3GTV2 as seed ortholog is 51%.
Alternative seed ortholog is H3HD43 (1 bits away from this cluster)

Group of orthologs #1408. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:27

H3AL85              	100.00%		H3H8E9              	100.00%
H2ZVA0              	23.95%		
H3A251              	23.29%		
H3ARR4              	21.18%		
H3AQV6              	13.75%		
H2ZYF8              	13.22%		
H3B501              	12.89%		
H3AQ55              	11.38%		
H3BC74              	11.12%		
H3AEI6              	10.66%		
H3ARH3              	9.61%		
H3AIK2              	7.17%		
Bootstrap support for H3AL85 as seed ortholog is 50%.
Alternative seed ortholog is H3AIW0 (3 bits away from this cluster)
Bootstrap support for H3H8E9 as seed ortholog is 68%.
Alternative seed ortholog is H3H5J1 (27 bits away from this cluster)

Group of orthologs #1409. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:190

H3A238              	100.00%		H3GLF2              	100.00%
H3B706              	28.65%		H3GK22              	6.57%
Bootstrap support for H3A238 as seed ortholog is 88%.
Bootstrap support for H3GLF2 as seed ortholog is 100%.

Group of orthologs #1410. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:96

H3ARW4              	100.00%		H3HAQ4              	100.00%
M3XLF6              	20.55%		
Bootstrap support for H3ARW4 as seed ortholog is 98%.
Bootstrap support for H3HAQ4 as seed ortholog is 99%.

Group of orthologs #1411. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.ramorum:190

H3AL98              	100.00%		H3GA80              	100.00%
Bootstrap support for H3AL98 as seed ortholog is 100%.
Bootstrap support for H3GA80 as seed ortholog is 100%.

Group of orthologs #1412. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:84

H3A473              	100.00%		H3GRN8              	100.00%
Bootstrap support for H3A473 as seed ortholog is 95%.
Bootstrap support for H3GRN8 as seed ortholog is 98%.

Group of orthologs #1413. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.ramorum:190

H3ANL2              	100.00%		H3GG52              	100.00%
Bootstrap support for H3ANL2 as seed ortholog is 100%.
Bootstrap support for H3GG52 as seed ortholog is 100%.

Group of orthologs #1414. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.ramorum:190

H3ANW7              	100.00%		H3GH43              	100.00%
Bootstrap support for H3ANW7 as seed ortholog is 100%.
Bootstrap support for H3GH43 as seed ortholog is 100%.

Group of orthologs #1415. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.ramorum:190

H3B4N2              	100.00%		H3G8S0              	100.00%
Bootstrap support for H3B4N2 as seed ortholog is 100%.
Bootstrap support for H3G8S0 as seed ortholog is 100%.

Group of orthologs #1416. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.ramorum:190

H3B3B9              	100.00%		H3GNB4              	100.00%
Bootstrap support for H3B3B9 as seed ortholog is 100%.
Bootstrap support for H3GNB4 as seed ortholog is 100%.

Group of orthologs #1417. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:189

H3BGD2              	100.00%		H3G6F4              	100.00%
H3A825              	62.16%		
Bootstrap support for H3BGD2 as seed ortholog is 100%.
Bootstrap support for H3G6F4 as seed ortholog is 100%.

Group of orthologs #1418. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:189

H3ARX8              	100.00%		H3G6N3              	100.00%
Bootstrap support for H3ARX8 as seed ortholog is 100%.
Bootstrap support for H3G6N3 as seed ortholog is 100%.

Group of orthologs #1419. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.ramorum:189

H3ASE1              	100.00%		H3G6E8              	100.00%
Bootstrap support for H3ASE1 as seed ortholog is 100%.
Bootstrap support for H3G6E8 as seed ortholog is 100%.

Group of orthologs #1420. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

H3B3T8              	100.00%		H3HBB2              	100.00%
H3AVK1              	59.95%		H3GDG0              	6.45%
                    	       		H3GCB1              	5.88%
                    	       		H3GVD9              	5.09%
Bootstrap support for H3B3T8 as seed ortholog is 100%.
Bootstrap support for H3HBB2 as seed ortholog is 100%.

Group of orthologs #1421. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

H3AKS5              	100.00%		H3GP76              	100.00%
H3AHV2              	13.45%		
Bootstrap support for H3AKS5 as seed ortholog is 100%.
Bootstrap support for H3GP76 as seed ortholog is 100%.

Group of orthologs #1422. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

H3B6B1              	100.00%		H3G9U8              	100.00%
                    	       		H3G9U5              	60.57%
Bootstrap support for H3B6B1 as seed ortholog is 100%.
Bootstrap support for H3G9U8 as seed ortholog is 100%.

Group of orthologs #1423. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:60

H3BBT6              	100.00%		H3GA95              	100.00%
H3BBF5              	53.77%		
Bootstrap support for H3BBT6 as seed ortholog is 100%.
Bootstrap support for H3GA95 as seed ortholog is 88%.

Group of orthologs #1424. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

M3XJW8              	100.00%		H3H5A8              	100.00%
M3XLC4              	9.80%		
Bootstrap support for M3XJW8 as seed ortholog is 100%.
Bootstrap support for H3H5A8 as seed ortholog is 100%.

Group of orthologs #1425. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

H3A222              	100.00%		H3GIH1              	100.00%
Bootstrap support for H3A222 as seed ortholog is 100%.
Bootstrap support for H3GIH1 as seed ortholog is 100%.

Group of orthologs #1426. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:188

H3ABJ6              	100.00%		H3GE71              	100.00%
Bootstrap support for H3ABJ6 as seed ortholog is 73%.
Alternative seed ortholog is H3AXY5 (42 bits away from this cluster)
Bootstrap support for H3GE71 as seed ortholog is 100%.

Group of orthologs #1427. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

H3AJW8              	100.00%		H3GEJ9              	100.00%
Bootstrap support for H3AJW8 as seed ortholog is 100%.
Bootstrap support for H3GEJ9 as seed ortholog is 100%.

Group of orthologs #1428. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.ramorum:188

H3A7W2              	100.00%		H3GWU4              	100.00%
Bootstrap support for H3A7W2 as seed ortholog is 100%.
Bootstrap support for H3GWU4 as seed ortholog is 100%.

Group of orthologs #1429. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.ramorum:187

H3AMD1              	100.00%		H3GI39              	100.00%
H3B8W2              	33.10%		
Bootstrap support for H3AMD1 as seed ortholog is 100%.
Bootstrap support for H3GI39 as seed ortholog is 100%.

Group of orthologs #1430. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.ramorum:187

H3AJ50              	100.00%		H3GZC5              	100.00%
H3BGS1              	41.45%		
Bootstrap support for H3AJ50 as seed ortholog is 100%.
Bootstrap support for H3GZC5 as seed ortholog is 100%.

Group of orthologs #1431. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.ramorum:187

H3BAP8              	100.00%		H3GHE9              	100.00%
H2ZV29              	43.92%		
Bootstrap support for H3BAP8 as seed ortholog is 100%.
Bootstrap support for H3GHE9 as seed ortholog is 100%.

Group of orthologs #1432. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.ramorum:187

H2ZXA2              	100.00%		H3G878              	100.00%
Bootstrap support for H2ZXA2 as seed ortholog is 100%.
Bootstrap support for H3G878 as seed ortholog is 100%.

Group of orthologs #1433. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.ramorum:187

H3AIB6              	100.00%		H3GCL0              	100.00%
Bootstrap support for H3AIB6 as seed ortholog is 100%.
Bootstrap support for H3GCL0 as seed ortholog is 100%.

Group of orthologs #1434. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.ramorum:187

H3AQW4              	100.00%		H3GGV5              	100.00%
Bootstrap support for H3AQW4 as seed ortholog is 100%.
Bootstrap support for H3GGV5 as seed ortholog is 100%.

Group of orthologs #1435. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:127

H3B3P9              	100.00%		H3GCK6              	100.00%
Bootstrap support for H3B3P9 as seed ortholog is 99%.
Bootstrap support for H3GCK6 as seed ortholog is 99%.

Group of orthologs #1436. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:17

H3B2F5              	100.00%		H3G6G4              	100.00%
H3BFS9              	39.62%		
Bootstrap support for H3B2F5 as seed ortholog is 97%.
Bootstrap support for H3G6G4 as seed ortholog is 93%.

Group of orthologs #1437. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:186

H2ZRM7              	100.00%		H3GFI2              	100.00%
Bootstrap support for H2ZRM7 as seed ortholog is 99%.
Bootstrap support for H3GFI2 as seed ortholog is 100%.

Group of orthologs #1438. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:47

H3A233              	100.00%		H3G8W4              	100.00%
Bootstrap support for H3A233 as seed ortholog is 94%.
Bootstrap support for H3G8W4 as seed ortholog is 91%.

Group of orthologs #1439. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.ramorum:186

H3AUG1              	100.00%		H3G9Z9              	100.00%
Bootstrap support for H3AUG1 as seed ortholog is 100%.
Bootstrap support for H3G9Z9 as seed ortholog is 100%.

Group of orthologs #1440. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.ramorum:186

H3AEJ9              	100.00%		H3GS08              	100.00%
Bootstrap support for H3AEJ9 as seed ortholog is 100%.
Bootstrap support for H3GS08 as seed ortholog is 100%.

Group of orthologs #1441. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:186

H3BCB2              	100.00%		H3G668              	100.00%
Bootstrap support for H3BCB2 as seed ortholog is 100%.
Bootstrap support for H3G668 as seed ortholog is 100%.

Group of orthologs #1442. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:186

H3AL24              	100.00%		H3GXB8              	100.00%
Bootstrap support for H3AL24 as seed ortholog is 99%.
Bootstrap support for H3GXB8 as seed ortholog is 100%.

Group of orthologs #1443. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.ramorum:84

H3A7F4              	100.00%		H3HBJ2              	100.00%
Bootstrap support for H3A7F4 as seed ortholog is 100%.
Bootstrap support for H3HBJ2 as seed ortholog is 99%.

Group of orthologs #1444. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.ramorum:186

M3XJ77              	100.00%		H3GBC5              	100.00%
Bootstrap support for M3XJ77 as seed ortholog is 100%.
Bootstrap support for H3GBC5 as seed ortholog is 100%.

Group of orthologs #1445. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:186

H3BIF8              	100.00%		H3GEK5              	100.00%
Bootstrap support for H3BIF8 as seed ortholog is 99%.
Bootstrap support for H3GEK5 as seed ortholog is 100%.

Group of orthologs #1446. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.ramorum:186

H3B2B2              	100.00%		H3H6K8              	100.00%
Bootstrap support for H3B2B2 as seed ortholog is 100%.
Bootstrap support for H3H6K8 as seed ortholog is 100%.

Group of orthologs #1447. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3A1Y1              	100.00%		H3GBT1              	100.00%
H3BAS7              	100.00%		H3GBS7              	100.00%
H3AVG5              	68.32%		
H3ATF9              	42.17%		
H3A7M4              	36.17%		
H3A8N9              	19.77%		
Bootstrap support for H3A1Y1 as seed ortholog is 100%.
Bootstrap support for H3BAS7 as seed ortholog is 100%.
Bootstrap support for H3GBT1 as seed ortholog is 100%.
Bootstrap support for H3GBS7 as seed ortholog is 100%.

Group of orthologs #1448. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3A3X0              	100.00%		H3G953              	100.00%
                    	       		H3G954              	98.64%
Bootstrap support for H3A3X0 as seed ortholog is 100%.
Bootstrap support for H3G953 as seed ortholog is 100%.

Group of orthologs #1449. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3B1D4              	100.00%		H3GIP8              	100.00%
H2ZU27              	21.49%		
Bootstrap support for H3B1D4 as seed ortholog is 100%.
Bootstrap support for H3GIP8 as seed ortholog is 100%.

Group of orthologs #1450. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3AQF2              	100.00%		H3H2R3              	100.00%
H3ADH0              	44.32%		
Bootstrap support for H3AQF2 as seed ortholog is 100%.
Bootstrap support for H3H2R3 as seed ortholog is 100%.

Group of orthologs #1451. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3B455              	100.00%		H3GTZ6              	100.00%
H3AK36              	26.76%		
Bootstrap support for H3B455 as seed ortholog is 100%.
Bootstrap support for H3GTZ6 as seed ortholog is 100%.

Group of orthologs #1452. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3A519              	100.00%		H3GAS8              	100.00%
Bootstrap support for H3A519 as seed ortholog is 100%.
Bootstrap support for H3GAS8 as seed ortholog is 100%.

Group of orthologs #1453. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:80

H3APP7              	100.00%		H3GA34              	100.00%
Bootstrap support for H3APP7 as seed ortholog is 97%.
Bootstrap support for H3GA34 as seed ortholog is 99%.

Group of orthologs #1454. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3AYN0              	100.00%		H3GQ65              	100.00%
Bootstrap support for H3AYN0 as seed ortholog is 100%.
Bootstrap support for H3GQ65 as seed ortholog is 100%.

Group of orthologs #1455. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.ramorum:185

H3AU64              	100.00%		H3HDW5              	100.00%
Bootstrap support for H3AU64 as seed ortholog is 100%.
Bootstrap support for H3HDW5 as seed ortholog is 100%.

Group of orthologs #1456. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:184

H3AER0              	100.00%		H3GB06              	100.00%
H3A1E5              	39.41%		H3GAM3              	75.05%
H3AS54              	22.52%		H3HB96              	25.16%
H3BGL6              	21.17%		H3H2V8              	5.33%
H3B3V1              	19.59%		
H2ZUH7              	19.14%		
H3BFB1              	18.02%		
H3AKK1              	12.84%		
H3B469              	10.14%		
H3BDR7              	9.91%		
Bootstrap support for H3AER0 as seed ortholog is 99%.
Bootstrap support for H3GB06 as seed ortholog is 100%.

Group of orthologs #1457. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.ramorum:144

H3B274              	100.00%		H3GVF5              	100.00%
H3A8D8              	62.08%		
Bootstrap support for H3B274 as seed ortholog is 100%.
Bootstrap support for H3GVF5 as seed ortholog is 100%.

Group of orthologs #1458. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.ramorum:184

H3B205              	100.00%		H3G7K0              	100.00%
Bootstrap support for H3B205 as seed ortholog is 100%.
Bootstrap support for H3G7K0 as seed ortholog is 100%.

Group of orthologs #1459. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.ramorum:184

H2ZU58              	100.00%		H3HDG8              	100.00%
Bootstrap support for H2ZU58 as seed ortholog is 100%.
Bootstrap support for H3HDG8 as seed ortholog is 100%.

Group of orthologs #1460. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:184

H3B8E3              	100.00%		H3GET3              	100.00%
Bootstrap support for H3B8E3 as seed ortholog is 98%.
Bootstrap support for H3GET3 as seed ortholog is 100%.

Group of orthologs #1461. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.ramorum:8

H3BEY6              	100.00%		H3GR73              	100.00%
Bootstrap support for H3BEY6 as seed ortholog is 100%.
Bootstrap support for H3GR73 as seed ortholog is 59%.
Alternative seed ortholog is H3G8R0 (8 bits away from this cluster)

Group of orthologs #1462. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.ramorum:183

H3B5F5              	100.00%		H3HC72              	100.00%
H3A2Z1              	41.79%		H3GAT1              	6.51%
H3AS69              	34.17%		
Bootstrap support for H3B5F5 as seed ortholog is 100%.
Bootstrap support for H3HC72 as seed ortholog is 100%.

Group of orthologs #1463. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:59

H2ZWY8              	100.00%		H3G667              	100.00%
Bootstrap support for H2ZWY8 as seed ortholog is 78%.
Bootstrap support for H3G667 as seed ortholog is 95%.

Group of orthologs #1464. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.ramorum:131

H3B5X8              	100.00%		H3G5M6              	100.00%
Bootstrap support for H3B5X8 as seed ortholog is 66%.
Alternative seed ortholog is H3AB13 (23 bits away from this cluster)
Bootstrap support for H3G5M6 as seed ortholog is 99%.

Group of orthologs #1465. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:183

H3A885              	100.00%		H3H107              	100.00%
Bootstrap support for H3A885 as seed ortholog is 99%.
Bootstrap support for H3H107 as seed ortholog is 100%.

Group of orthologs #1466. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.ramorum:57

H3B2F2              	100.00%		H3GJ70              	100.00%
Bootstrap support for H3B2F2 as seed ortholog is 100%.
Bootstrap support for H3GJ70 as seed ortholog is 87%.

Group of orthologs #1467. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.ramorum:103

H3BFR6              	100.00%		H3GAG4              	100.00%
Bootstrap support for H3BFR6 as seed ortholog is 100%.
Bootstrap support for H3GAG4 as seed ortholog is 100%.

Group of orthologs #1468. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.ramorum:183

H3ALW7              	100.00%		H3HB20              	100.00%
Bootstrap support for H3ALW7 as seed ortholog is 100%.
Bootstrap support for H3HB20 as seed ortholog is 100%.

Group of orthologs #1469. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.ramorum:74

H3A5K1              	100.00%		H3H548              	100.00%
H3BCQ8              	39.20%		
H3AZW3              	31.92%		
Bootstrap support for H3A5K1 as seed ortholog is 100%.
Bootstrap support for H3H548 as seed ortholog is 92%.

Group of orthologs #1470. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.ramorum:182

H2ZZ94              	100.00%		H3GE78              	100.00%
H3BI83              	30.88%		
Bootstrap support for H2ZZ94 as seed ortholog is 100%.
Bootstrap support for H3GE78 as seed ortholog is 100%.

Group of orthologs #1471. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.ramorum:182

H3B568              	100.00%		H3GKI1              	100.00%
Bootstrap support for H3B568 as seed ortholog is 100%.
Bootstrap support for H3GKI1 as seed ortholog is 100%.

Group of orthologs #1472. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.ramorum:40

H3AE34              	100.00%		H3GFD8              	100.00%
H2ZXS9              	38.47%		
H2ZZD6              	38.31%		
Bootstrap support for H3AE34 as seed ortholog is 61%.
Alternative seed ortholog is H3AFG8 (14 bits away from this cluster)
Bootstrap support for H3GFD8 as seed ortholog is 91%.

Group of orthologs #1473. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:181

H3BIA1              	100.00%		H3H7R5              	100.00%
H3B7T3              	55.86%		
H3B0A6              	41.36%		
Bootstrap support for H3BIA1 as seed ortholog is 100%.
Bootstrap support for H3H7R5 as seed ortholog is 100%.

Group of orthologs #1474. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:58

H3A2L1              	100.00%		H3GXT4              	100.00%
H2ZTU6              	13.49%		
Bootstrap support for H3A2L1 as seed ortholog is 100%.
Bootstrap support for H3GXT4 as seed ortholog is 97%.

Group of orthologs #1475. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:181

H3A1N9              	100.00%		H3GEE5              	100.00%
Bootstrap support for H3A1N9 as seed ortholog is 100%.
Bootstrap support for H3GEE5 as seed ortholog is 100%.

Group of orthologs #1476. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:181

H2ZSJ7              	100.00%		H3GPM7              	100.00%
Bootstrap support for H2ZSJ7 as seed ortholog is 100%.
Bootstrap support for H3GPM7 as seed ortholog is 100%.

Group of orthologs #1477. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:181

H2ZYB4              	100.00%		H3HD53              	100.00%
Bootstrap support for H2ZYB4 as seed ortholog is 100%.
Bootstrap support for H3HD53 as seed ortholog is 100%.

Group of orthologs #1478. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.ramorum:106

H3A513              	100.00%		H3HCL7              	100.00%
Bootstrap support for H3A513 as seed ortholog is 100%.
Bootstrap support for H3HCL7 as seed ortholog is 99%.

Group of orthologs #1479. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:180

H3AC41              	100.00%		H3GDV6              	100.00%
H3BCW9              	37.47%		H3G5H6              	19.86%
                    	       		H3G5H5              	6.97%
Bootstrap support for H3AC41 as seed ortholog is 99%.
Bootstrap support for H3GDV6 as seed ortholog is 100%.

Group of orthologs #1480. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.ramorum:56

H3AWT8              	100.00%		H3GD12              	100.00%
H2ZWQ5              	52.73%		
H3B5W3              	20.58%		
Bootstrap support for H3AWT8 as seed ortholog is 100%.
Bootstrap support for H3GD12 as seed ortholog is 68%.
Alternative seed ortholog is H3GR07 (56 bits away from this cluster)

Group of orthologs #1481. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.ramorum:180

H3A9G4              	100.00%		H3GJY6              	100.00%
Bootstrap support for H3A9G4 as seed ortholog is 100%.
Bootstrap support for H3GJY6 as seed ortholog is 100%.

Group of orthologs #1482. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.ramorum:180

H3AP59              	100.00%		H3GGU4              	100.00%
Bootstrap support for H3AP59 as seed ortholog is 100%.
Bootstrap support for H3GGU4 as seed ortholog is 100%.

Group of orthologs #1483. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.ramorum:180

H3B7R4              	100.00%		H3GV06              	100.00%
Bootstrap support for H3B7R4 as seed ortholog is 100%.
Bootstrap support for H3GV06 as seed ortholog is 100%.

Group of orthologs #1484. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.ramorum:180

H3BFN8              	100.00%		H3HB87              	100.00%
Bootstrap support for H3BFN8 as seed ortholog is 100%.
Bootstrap support for H3HB87 as seed ortholog is 100%.

Group of orthologs #1485. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:179

H3BE97              	100.00%		H3G908              	100.00%
H3AC26              	31.57%		H3GAS3              	59.21%
H3AY00              	21.82%		H3GME0              	42.11%
H3AKS6              	17.16%		
Bootstrap support for H3BE97 as seed ortholog is 100%.
Bootstrap support for H3G908 as seed ortholog is 100%.

Group of orthologs #1486. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.ramorum:23

H3A967              	100.00%		H3GBF0              	100.00%
H3A1A2              	25.00%		
H3AZQ9              	13.86%		
Bootstrap support for H3A967 as seed ortholog is 77%.
Bootstrap support for H3GBF0 as seed ortholog is 73%.
Alternative seed ortholog is H3HCA0 (23 bits away from this cluster)

Group of orthologs #1487. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:89

H2ZYS6              	100.00%		H3H0U7              	100.00%
H3B897              	35.74%		H3HAE0              	83.62%
Bootstrap support for H2ZYS6 as seed ortholog is 83%.
Bootstrap support for H3H0U7 as seed ortholog is 97%.

Group of orthologs #1488. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:179

H3B660              	100.00%		H3H7T6              	100.00%
H2ZSD0              	42.77%		
Bootstrap support for H3B660 as seed ortholog is 100%.
Bootstrap support for H3H7T6 as seed ortholog is 100%.

Group of orthologs #1489. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:179

H2ZSW5              	100.00%		H3GA08              	100.00%
Bootstrap support for H2ZSW5 as seed ortholog is 100%.
Bootstrap support for H3GA08 as seed ortholog is 100%.

Group of orthologs #1490. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:179

H3AVH8              	100.00%		H3G6D5              	100.00%
Bootstrap support for H3AVH8 as seed ortholog is 99%.
Bootstrap support for H3G6D5 as seed ortholog is 100%.

Group of orthologs #1491. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:102

H3AUV4              	100.00%		H3G861              	100.00%
Bootstrap support for H3AUV4 as seed ortholog is 99%.
Bootstrap support for H3G861 as seed ortholog is 100%.

Group of orthologs #1492. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:179

H3AE45              	100.00%		H3GVS2              	100.00%
Bootstrap support for H3AE45 as seed ortholog is 100%.
Bootstrap support for H3GVS2 as seed ortholog is 100%.

Group of orthologs #1493. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.ramorum:179

M3XGW8              	100.00%		H3GDA7              	100.00%
Bootstrap support for M3XGW8 as seed ortholog is 100%.
Bootstrap support for H3GDA7 as seed ortholog is 100%.

Group of orthologs #1494. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:178

H3A2U8              	100.00%		H3G8P7              	100.00%
H3B4Q3              	7.58%		
Bootstrap support for H3A2U8 as seed ortholog is 100%.
Bootstrap support for H3G8P7 as seed ortholog is 100%.

Group of orthologs #1495. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:178

H3AZ52              	100.00%		H3GHS0              	100.00%
H3BHZ3              	43.42%		
Bootstrap support for H3AZ52 as seed ortholog is 99%.
Bootstrap support for H3GHS0 as seed ortholog is 100%.

Group of orthologs #1496. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:178

H2ZUA3              	100.00%		H3G9C0              	100.00%
Bootstrap support for H2ZUA3 as seed ortholog is 100%.
Bootstrap support for H3G9C0 as seed ortholog is 100%.

Group of orthologs #1497. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:178

H2ZW20              	100.00%		H3GDR6              	100.00%
Bootstrap support for H2ZW20 as seed ortholog is 100%.
Bootstrap support for H3GDR6 as seed ortholog is 100%.

Group of orthologs #1498. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:178

H3B2B4              	100.00%		H3GAY3              	100.00%
Bootstrap support for H3B2B4 as seed ortholog is 100%.
Bootstrap support for H3GAY3 as seed ortholog is 100%.

Group of orthologs #1499. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:178

H3BBS2              	100.00%		H3G8N3              	100.00%
Bootstrap support for H3BBS2 as seed ortholog is 100%.
Bootstrap support for H3G8N3 as seed ortholog is 100%.

Group of orthologs #1500. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:178

H3BH98              	100.00%		H3G7X3              	100.00%
Bootstrap support for H3BH98 as seed ortholog is 100%.
Bootstrap support for H3G7X3 as seed ortholog is 100%.

Group of orthologs #1501. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.ramorum:178

H3APJ6              	100.00%		H3HEE5              	100.00%
Bootstrap support for H3APJ6 as seed ortholog is 100%.
Bootstrap support for H3HEE5 as seed ortholog is 100%.

Group of orthologs #1502. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:177

H3B7P4              	100.00%		H3GSJ5              	100.00%
H3BHG8              	24.05%		
H3AD99              	20.78%		
H2ZWC9              	6.54%		
Bootstrap support for H3B7P4 as seed ortholog is 94%.
Bootstrap support for H3GSJ5 as seed ortholog is 100%.

Group of orthologs #1503. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.ramorum:177

H3BD64              	100.00%		H3GH25              	100.00%
H3B9T5              	39.61%		
Bootstrap support for H3BD64 as seed ortholog is 100%.
Bootstrap support for H3GH25 as seed ortholog is 100%.

Group of orthologs #1504. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:177

H3B5M9              	100.00%		H3HD68              	100.00%
H3ADF7              	42.44%		
Bootstrap support for H3B5M9 as seed ortholog is 99%.
Bootstrap support for H3HD68 as seed ortholog is 100%.

Group of orthologs #1505. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.ramorum:177

H3BBK5              	100.00%		H3GYG9              	100.00%
Bootstrap support for H3BBK5 as seed ortholog is 100%.
Bootstrap support for H3GYG9 as seed ortholog is 100%.

Group of orthologs #1506. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.ramorum:91

H3AQJ2              	100.00%		H3GRT1              	100.00%
                    	       		H3H884              	100.00%
Bootstrap support for H3AQJ2 as seed ortholog is 99%.
Bootstrap support for H3GRT1 as seed ortholog is 99%.
Bootstrap support for H3H884 as seed ortholog is 99%.

Group of orthologs #1507. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:176

H3AH37              	100.00%		H3H5E8              	100.00%
H3AJ82              	27.14%		
Bootstrap support for H3AH37 as seed ortholog is 99%.
Bootstrap support for H3H5E8 as seed ortholog is 100%.

Group of orthologs #1508. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.ramorum:176

H3A3E4              	100.00%		H3GMV0              	100.00%
Bootstrap support for H3A3E4 as seed ortholog is 100%.
Bootstrap support for H3GMV0 as seed ortholog is 100%.

Group of orthologs #1509. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.ramorum:176

H3AAM3              	100.00%		H3GS59              	100.00%
Bootstrap support for H3AAM3 as seed ortholog is 100%.
Bootstrap support for H3GS59 as seed ortholog is 100%.

Group of orthologs #1510. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:176

H3AVN9              	100.00%		H3GCB3              	100.00%
Bootstrap support for H3AVN9 as seed ortholog is 99%.
Bootstrap support for H3GCB3 as seed ortholog is 100%.

Group of orthologs #1511. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:176

M3XKK1              	100.00%		H3G8P3              	100.00%
Bootstrap support for M3XKK1 as seed ortholog is 99%.
Bootstrap support for H3G8P3 as seed ortholog is 100%.

Group of orthologs #1512. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.ramorum:176

H3AXA9              	100.00%		H3GV90              	100.00%
Bootstrap support for H3AXA9 as seed ortholog is 100%.
Bootstrap support for H3GV90 as seed ortholog is 100%.

Group of orthologs #1513. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.ramorum:176

H3ALU6              	100.00%		H3HBD3              	100.00%
Bootstrap support for H3ALU6 as seed ortholog is 100%.
Bootstrap support for H3HBD3 as seed ortholog is 100%.

Group of orthologs #1514. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:176

H3BHT0              	100.00%		H3GMD7              	100.00%
Bootstrap support for H3BHT0 as seed ortholog is 99%.
Bootstrap support for H3GMD7 as seed ortholog is 100%.

Group of orthologs #1515. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:60

H2ZZG3              	100.00%		H3G8V4              	100.00%
Bootstrap support for H2ZZG3 as seed ortholog is 100%.
Bootstrap support for H3G8V4 as seed ortholog is 95%.

Group of orthologs #1516. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:103

H3AIU4              	100.00%		H3G5L8              	100.00%
Bootstrap support for H3AIU4 as seed ortholog is 100%.
Bootstrap support for H3G5L8 as seed ortholog is 99%.

Group of orthologs #1517. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:175

H3A5F2              	100.00%		H3GJR7              	100.00%
Bootstrap support for H3A5F2 as seed ortholog is 100%.
Bootstrap support for H3GJR7 as seed ortholog is 100%.

Group of orthologs #1518. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:175

H3AK52              	100.00%		H3G8X7              	100.00%
Bootstrap support for H3AK52 as seed ortholog is 100%.
Bootstrap support for H3G8X7 as seed ortholog is 100%.

Group of orthologs #1519. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:175

H3AXN5              	100.00%		H3G997              	100.00%
Bootstrap support for H3AXN5 as seed ortholog is 100%.
Bootstrap support for H3G997 as seed ortholog is 100%.

Group of orthologs #1520. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:175

H3B8M8              	100.00%		H3GQL5              	100.00%
Bootstrap support for H3B8M8 as seed ortholog is 100%.
Bootstrap support for H3GQL5 as seed ortholog is 100%.

Group of orthologs #1521. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:175

M3XJ92              	100.00%		H3GGU8              	100.00%
Bootstrap support for M3XJ92 as seed ortholog is 100%.
Bootstrap support for H3GGU8 as seed ortholog is 100%.

Group of orthologs #1522. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.ramorum:175

H3BB04              	100.00%		H3GSE5              	100.00%
Bootstrap support for H3BB04 as seed ortholog is 100%.
Bootstrap support for H3GSE5 as seed ortholog is 100%.

Group of orthologs #1523. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:174

H3AD46              	100.00%		H3GZ76              	100.00%
H3B1Y3              	38.53%		
Bootstrap support for H3AD46 as seed ortholog is 94%.
Bootstrap support for H3GZ76 as seed ortholog is 100%.

Group of orthologs #1524. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.ramorum:174

M3XHU7              	100.00%		H3G8E5              	100.00%
H3AYY5              	47.48%		
Bootstrap support for M3XHU7 as seed ortholog is 100%.
Bootstrap support for H3G8E5 as seed ortholog is 100%.

Group of orthologs #1525. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.ramorum:174

H3A242              	100.00%		H3G9R6              	100.00%
Bootstrap support for H3A242 as seed ortholog is 100%.
Bootstrap support for H3G9R6 as seed ortholog is 100%.

Group of orthologs #1526. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.ramorum:174

H2ZZS9              	100.00%		H3GT92              	100.00%
Bootstrap support for H2ZZS9 as seed ortholog is 100%.
Bootstrap support for H3GT92 as seed ortholog is 100%.

Group of orthologs #1527. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:174

H2ZZ46              	100.00%		H3GUR3              	100.00%
Bootstrap support for H2ZZ46 as seed ortholog is 99%.
Bootstrap support for H3GUR3 as seed ortholog is 100%.

Group of orthologs #1528. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3AGS7              	100.00%		H3GGV9              	100.00%
H3B840              	43.82%		
H2ZWX7              	39.61%		
Bootstrap support for H3AGS7 as seed ortholog is 100%.
Bootstrap support for H3GGV9 as seed ortholog is 100%.

Group of orthologs #1529. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3B3E1              	100.00%		H3G748              	100.00%
                    	       		H3G5V0              	36.81%
                    	       		H3G749              	14.11%
Bootstrap support for H3B3E1 as seed ortholog is 100%.
Bootstrap support for H3G748 as seed ortholog is 100%.

Group of orthologs #1530. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H2ZWG3              	100.00%		H3HBU7              	100.00%
                    	       		H3GWF5              	9.58%
                    	       		H3GC61              	6.28%
Bootstrap support for H2ZWG3 as seed ortholog is 100%.
Bootstrap support for H3HBU7 as seed ortholog is 100%.

Group of orthologs #1531. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.ramorum:173

H3ABG4              	100.00%		H3GME5              	100.00%
Bootstrap support for H3ABG4 as seed ortholog is 79%.
Bootstrap support for H3GME5 as seed ortholog is 100%.

Group of orthologs #1532. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3A2U3              	100.00%		H3GY61              	100.00%
Bootstrap support for H3A2U3 as seed ortholog is 100%.
Bootstrap support for H3GY61 as seed ortholog is 100%.

Group of orthologs #1533. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.ramorum:173

H3AWP7              	100.00%		H3GDE6              	100.00%
Bootstrap support for H3AWP7 as seed ortholog is 85%.
Bootstrap support for H3GDE6 as seed ortholog is 100%.

Group of orthologs #1534. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:129

H3B7Y2              	100.00%		H3G5G4              	100.00%
Bootstrap support for H3B7Y2 as seed ortholog is 100%.
Bootstrap support for H3G5G4 as seed ortholog is 100%.

Group of orthologs #1535. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3AZ72              	100.00%		H3GHR1              	100.00%
Bootstrap support for H3AZ72 as seed ortholog is 100%.
Bootstrap support for H3GHR1 as seed ortholog is 100%.

Group of orthologs #1536. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3AYX0              	100.00%		H3GQA4              	100.00%
Bootstrap support for H3AYX0 as seed ortholog is 100%.
Bootstrap support for H3GQA4 as seed ortholog is 100%.

Group of orthologs #1537. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3BG24              	100.00%		H3GFL7              	100.00%
Bootstrap support for H3BG24 as seed ortholog is 100%.
Bootstrap support for H3GFL7 as seed ortholog is 100%.

Group of orthologs #1538. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3B0T9              	100.00%		H3GWS0              	100.00%
Bootstrap support for H3B0T9 as seed ortholog is 100%.
Bootstrap support for H3GWS0 as seed ortholog is 100%.

Group of orthologs #1539. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3AJF5              	100.00%		H3HBV9              	100.00%
Bootstrap support for H3AJF5 as seed ortholog is 100%.
Bootstrap support for H3HBV9 as seed ortholog is 100%.

Group of orthologs #1540. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:112

H3BFR2              	100.00%		H3GQZ6              	100.00%
Bootstrap support for H3BFR2 as seed ortholog is 100%.
Bootstrap support for H3GQZ6 as seed ortholog is 99%.

Group of orthologs #1541. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.ramorum:173

H3BID0              	100.00%		H3H2K5              	100.00%
Bootstrap support for H3BID0 as seed ortholog is 100%.
Bootstrap support for H3H2K5 as seed ortholog is 100%.

Group of orthologs #1542. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.ramorum:172

H3AMG2              	100.00%		H3GRU2              	100.00%
H3BFA0              	40.23%		
H3A6Z2              	11.90%		
Bootstrap support for H3AMG2 as seed ortholog is 100%.
Bootstrap support for H3GRU2 as seed ortholog is 100%.

Group of orthologs #1543. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.ramorum:172

H3A535              	100.00%		H3GGP8              	100.00%
Bootstrap support for H3A535 as seed ortholog is 100%.
Bootstrap support for H3GGP8 as seed ortholog is 100%.

Group of orthologs #1544. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.ramorum:172

H3AHG9              	100.00%		H3GAC4              	100.00%
Bootstrap support for H3AHG9 as seed ortholog is 100%.
Bootstrap support for H3GAC4 as seed ortholog is 100%.

Group of orthologs #1545. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.ramorum:172

H3A792              	100.00%		H3HDU6              	100.00%
Bootstrap support for H3A792 as seed ortholog is 100%.
Bootstrap support for H3HDU6 as seed ortholog is 100%.

Group of orthologs #1546. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.ramorum:172

H3BFH2              	100.00%		H3GV42              	100.00%
Bootstrap support for H3BFH2 as seed ortholog is 100%.
Bootstrap support for H3GV42 as seed ortholog is 100%.

Group of orthologs #1547. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.ramorum:131

H3BCJ0              	100.00%		H3GXW4              	100.00%
Bootstrap support for H3BCJ0 as seed ortholog is 100%.
Bootstrap support for H3GXW4 as seed ortholog is 99%.

Group of orthologs #1548. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H3AYB3              	100.00%		H3GSU1              	100.00%
H2ZXB4              	58.46%		H3G9P6              	89.65%
H3A4V9              	32.29%		H3GAJ8              	31.77%
H3AGN3              	30.62%		H3GB50              	31.63%
H2ZSX7              	24.61%		
H3BDV8              	6.46%		
Bootstrap support for H3AYB3 as seed ortholog is 100%.
Bootstrap support for H3GSU1 as seed ortholog is 100%.

Group of orthologs #1549. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:171

H3B7W0              	100.00%		H3GX65              	100.00%
                    	       		H3GCA0              	56.15%
                    	       		H3HAU3              	40.64%
                    	       		H3GMX7              	21.12%
                    	       		H3GMX6              	20.99%
                    	       		H3GRK4              	14.44%
                    	       		H3GRK3              	12.43%
Bootstrap support for H3B7W0 as seed ortholog is 99%.
Bootstrap support for H3GX65 as seed ortholog is 100%.

Group of orthologs #1550. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:171

H2ZWG7              	100.00%		H3GU99              	100.00%
H3BAU8              	25.97%		H3GU97              	25.00%
H3AZC8              	11.33%		H3GU98              	9.15%
                    	       		H3GUH1              	6.71%
Bootstrap support for H2ZWG7 as seed ortholog is 99%.
Bootstrap support for H3GU99 as seed ortholog is 100%.

Group of orthologs #1551. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H2ZZ18              	100.00%		H3H0P4              	100.00%
H3ASK9              	68.59%		
H3A5J6              	53.63%		
H2ZTS2              	18.71%		
H3BBI7              	16.76%		
H3A612              	15.73%		
Bootstrap support for H2ZZ18 as seed ortholog is 100%.
Bootstrap support for H3H0P4 as seed ortholog is 100%.

Group of orthologs #1552. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H3A7G1              	100.00%		H3G8V2              	100.00%
H3AQN7              	34.05%		
Bootstrap support for H3A7G1 as seed ortholog is 100%.
Bootstrap support for H3G8V2 as seed ortholog is 100%.

Group of orthologs #1553. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H2ZWT0              	100.00%		H3GPK2              	100.00%
H3AMM3              	15.29%		
Bootstrap support for H2ZWT0 as seed ortholog is 100%.
Bootstrap support for H3GPK2 as seed ortholog is 100%.

Group of orthologs #1554. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H3AM99              	100.00%		H3G6Z2              	100.00%
Bootstrap support for H3AM99 as seed ortholog is 100%.
Bootstrap support for H3G6Z2 as seed ortholog is 100%.

Group of orthologs #1555. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H3AJI9              	100.00%		H3GL66              	100.00%
Bootstrap support for H3AJI9 as seed ortholog is 100%.
Bootstrap support for H3GL66 as seed ortholog is 100%.

Group of orthologs #1556. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.ramorum:171

H3B100              	100.00%		H3GKI7              	100.00%
Bootstrap support for H3B100 as seed ortholog is 100%.
Bootstrap support for H3GKI7 as seed ortholog is 100%.

Group of orthologs #1557. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:171

H3B710              	100.00%		H3GVF4              	100.00%
Bootstrap support for H3B710 as seed ortholog is 99%.
Bootstrap support for H3GVF4 as seed ortholog is 100%.

Group of orthologs #1558. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.ramorum:170

H2ZW30              	100.00%		H3GKK2              	100.00%
H3BH60              	41.68%		
H3AN91              	38.41%		
Bootstrap support for H2ZW30 as seed ortholog is 100%.
Bootstrap support for H3GKK2 as seed ortholog is 100%.

Group of orthologs #1559. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.ramorum:170

H3BBM6              	100.00%		H3GE34              	100.00%
H3AT04              	45.78%		H3GSQ0              	9.14%
Bootstrap support for H3BBM6 as seed ortholog is 100%.
Bootstrap support for H3GE34 as seed ortholog is 100%.

Group of orthologs #1560. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.ramorum:170

H3B8P1              	100.00%		H3GZ44              	100.00%
M3XI03              	41.88%		
Bootstrap support for H3B8P1 as seed ortholog is 100%.
Bootstrap support for H3GZ44 as seed ortholog is 100%.

Group of orthologs #1561. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.ramorum:170

H3ANZ6              	100.00%		H3GED3              	100.00%
Bootstrap support for H3ANZ6 as seed ortholog is 100%.
Bootstrap support for H3GED3 as seed ortholog is 100%.

Group of orthologs #1562. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.ramorum:169

H3AVR8              	100.00%		H3GAQ7              	100.00%
Bootstrap support for H3AVR8 as seed ortholog is 100%.
Bootstrap support for H3GAQ7 as seed ortholog is 100%.

Group of orthologs #1563. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:108

H3B673              	100.00%		H3G7R5              	100.00%
Bootstrap support for H3B673 as seed ortholog is 99%.
Bootstrap support for H3G7R5 as seed ortholog is 99%.

Group of orthologs #1564. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.ramorum:169

H3ASJ3              	100.00%		H3GQH7              	100.00%
Bootstrap support for H3ASJ3 as seed ortholog is 100%.
Bootstrap support for H3GQH7 as seed ortholog is 100%.

Group of orthologs #1565. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:169

M3XKD0              	100.00%		H3G8F4              	100.00%
Bootstrap support for M3XKD0 as seed ortholog is 99%.
Bootstrap support for H3G8F4 as seed ortholog is 100%.

Group of orthologs #1566. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.ramorum:169

M3XGK0              	100.00%		H3GV00              	100.00%
Bootstrap support for M3XGK0 as seed ortholog is 100%.
Bootstrap support for H3GV00 as seed ortholog is 100%.

Group of orthologs #1567. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3B4E6              	100.00%		H3GUI4              	100.00%
H3BEW8              	71.53%		
H3A074              	31.82%		
Bootstrap support for H3B4E6 as seed ortholog is 100%.
Bootstrap support for H3GUI4 as seed ortholog is 100%.

Group of orthologs #1568. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.ramorum:168

H3AD09              	100.00%		H3GID2              	100.00%
H3BIN8              	57.34%		
Bootstrap support for H3AD09 as seed ortholog is 94%.
Bootstrap support for H3GID2 as seed ortholog is 100%.

Group of orthologs #1569. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:168

H3B607              	100.00%		H3G6L3              	100.00%
                    	       		H3G8A0              	96.14%
Bootstrap support for H3B607 as seed ortholog is 97%.
Bootstrap support for H3G6L3 as seed ortholog is 100%.

Group of orthologs #1570. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3B8Z5              	100.00%		H3GIA5              	100.00%
H3AZB8              	38.65%		
Bootstrap support for H3B8Z5 as seed ortholog is 100%.
Bootstrap support for H3GIA5 as seed ortholog is 100%.

Group of orthologs #1571. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H2ZSH0              	100.00%		H3GV87              	100.00%
Bootstrap support for H2ZSH0 as seed ortholog is 100%.
Bootstrap support for H3GV87 as seed ortholog is 100%.

Group of orthologs #1572. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3AC68              	100.00%		H3GI13              	100.00%
Bootstrap support for H3AC68 as seed ortholog is 100%.
Bootstrap support for H3GI13 as seed ortholog is 100%.

Group of orthologs #1573. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3AV27              	100.00%		H3GC84              	100.00%
Bootstrap support for H3AV27 as seed ortholog is 100%.
Bootstrap support for H3GC84 as seed ortholog is 100%.

Group of orthologs #1574. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:67

H3B6P3              	100.00%		H3G6G5              	100.00%
Bootstrap support for H3B6P3 as seed ortholog is 99%.
Bootstrap support for H3G6G5 as seed ortholog is 99%.

Group of orthologs #1575. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3B430              	100.00%		H3GFJ5              	100.00%
Bootstrap support for H3B430 as seed ortholog is 100%.
Bootstrap support for H3GFJ5 as seed ortholog is 100%.

Group of orthologs #1576. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3APF5              	100.00%		H3H2J5              	100.00%
Bootstrap support for H3APF5 as seed ortholog is 100%.
Bootstrap support for H3H2J5 as seed ortholog is 100%.

Group of orthologs #1577. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:168

H3B855              	100.00%		H3GY55              	100.00%
Bootstrap support for H3B855 as seed ortholog is 99%.
Bootstrap support for H3GY55 as seed ortholog is 100%.

Group of orthologs #1578. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.ramorum:168

H3BGI0              	100.00%		H3GWZ1              	100.00%
Bootstrap support for H3BGI0 as seed ortholog is 100%.
Bootstrap support for H3GWZ1 as seed ortholog is 100%.

Group of orthologs #1579. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:41

H2ZXG0              	100.00%		H3GG66              	100.00%
H3AAZ8              	100.00%		H3H3Q4              	100.00%
H3AQT5              	71.89%		H3H4Y2              	51.56%
H3BEM8              	29.67%		
H3BIF6              	27.92%		
H3AIP1              	26.53%		
H3A5E3              	24.03%		
H3B226              	11.94%		
H3B0L7              	11.49%		
H3A9A8              	11.04%		
H3A5H8              	10.36%		
Bootstrap support for H2ZXG0 as seed ortholog is 100%.
Bootstrap support for H3AAZ8 as seed ortholog is 100%.
Bootstrap support for H3GG66 as seed ortholog is 80%.
Bootstrap support for H3H3Q4 as seed ortholog is 60%.
Alternative seed ortholog is H3GHG5 (41 bits away from this cluster)

Group of orthologs #1580. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:167

H3BI61              	100.00%		H3GTH4              	100.00%
H2ZU52              	40.06%		
H3AS16              	26.83%		
Bootstrap support for H3BI61 as seed ortholog is 100%.
Bootstrap support for H3GTH4 as seed ortholog is 100%.

Group of orthologs #1581. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:3

H2ZTZ1              	100.00%		H3H1K3              	100.00%
                    	       		H3H1K1              	51.57%
Bootstrap support for H2ZTZ1 as seed ortholog is 100%.
Bootstrap support for H3H1K3 as seed ortholog is 56%.
Alternative seed ortholog is H3GV25 (3 bits away from this cluster)

Group of orthologs #1582. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:167

H3BFE6              	100.00%		H3GJP3              	100.00%
H3BG75              	28.63%		
Bootstrap support for H3BFE6 as seed ortholog is 100%.
Bootstrap support for H3GJP3 as seed ortholog is 100%.

Group of orthologs #1583. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:121

H3A6P0              	100.00%		H3G7Q5              	100.00%
Bootstrap support for H3A6P0 as seed ortholog is 100%.
Bootstrap support for H3G7Q5 as seed ortholog is 100%.

Group of orthologs #1584. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.ramorum:15

H2ZXP5              	100.00%		H3GXC9              	100.00%
Bootstrap support for H2ZXP5 as seed ortholog is 84%.
Bootstrap support for H3GXC9 as seed ortholog is 72%.
Alternative seed ortholog is H3GQM4 (15 bits away from this cluster)

Group of orthologs #1585. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:71

H3A6K0              	100.00%		H3HB56              	100.00%
Bootstrap support for H3A6K0 as seed ortholog is 89%.
Bootstrap support for H3HB56 as seed ortholog is 93%.

Group of orthologs #1586. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.ramorum:167

H3B8Y0              	100.00%		H3GVF3              	100.00%
Bootstrap support for H3B8Y0 as seed ortholog is 100%.
Bootstrap support for H3GVF3 as seed ortholog is 100%.

Group of orthologs #1587. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3A0L9              	100.00%		H3H550              	100.00%
H2ZRP4              	40.59%		H3GXF3              	50.72%
Bootstrap support for H3A0L9 as seed ortholog is 100%.
Bootstrap support for H3H550 as seed ortholog is 100%.

Group of orthologs #1588. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:166

H3B980              	100.00%		H3G6L7              	100.00%
H3ATC3              	35.86%		H3G6H5              	36.80%
Bootstrap support for H3B980 as seed ortholog is 95%.
Bootstrap support for H3G6L7 as seed ortholog is 100%.

Group of orthologs #1589. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:110

H3AAC1              	100.00%		H3GE17              	100.00%
                    	       		H3HBB0              	23.69%
Bootstrap support for H3AAC1 as seed ortholog is 98%.
Bootstrap support for H3GE17 as seed ortholog is 98%.

Group of orthologs #1590. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3ADT7              	100.00%		H3GN89              	100.00%
H3BDX4              	50.68%		
Bootstrap support for H3ADT7 as seed ortholog is 100%.
Bootstrap support for H3GN89 as seed ortholog is 100%.

Group of orthologs #1591. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3BAE2              	100.00%		H3G8Z1              	100.00%
                    	       		H3G9E6              	27.81%
Bootstrap support for H3BAE2 as seed ortholog is 100%.
Bootstrap support for H3G8Z1 as seed ortholog is 100%.

Group of orthologs #1592. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3B6I8              	100.00%		H3GR01              	100.00%
H3BIP8              	18.53%		
Bootstrap support for H3B6I8 as seed ortholog is 100%.
Bootstrap support for H3GR01 as seed ortholog is 100%.

Group of orthologs #1593. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3A6R2              	100.00%		H3GF34              	100.00%
Bootstrap support for H3A6R2 as seed ortholog is 100%.
Bootstrap support for H3GF34 as seed ortholog is 100%.

Group of orthologs #1594. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:166

H3ALI9              	100.00%		H3G941              	100.00%
Bootstrap support for H3ALI9 as seed ortholog is 98%.
Bootstrap support for H3G941 as seed ortholog is 100%.

Group of orthologs #1595. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:123

H3APQ5              	100.00%		H3GC99              	100.00%
Bootstrap support for H3APQ5 as seed ortholog is 100%.
Bootstrap support for H3GC99 as seed ortholog is 99%.

Group of orthologs #1596. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3ATH4              	100.00%		H3G9X2              	100.00%
Bootstrap support for H3ATH4 as seed ortholog is 100%.
Bootstrap support for H3G9X2 as seed ortholog is 100%.

Group of orthologs #1597. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:112

H3AQC6              	100.00%		H3GDA4              	100.00%
Bootstrap support for H3AQC6 as seed ortholog is 100%.
Bootstrap support for H3GDA4 as seed ortholog is 100%.

Group of orthologs #1598. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3AND2              	100.00%		H3GNS6              	100.00%
Bootstrap support for H3AND2 as seed ortholog is 100%.
Bootstrap support for H3GNS6 as seed ortholog is 100%.

Group of orthologs #1599. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:22

H3ATT8              	100.00%		H3GRQ1              	100.00%
Bootstrap support for H3ATT8 as seed ortholog is 91%.
Bootstrap support for H3GRQ1 as seed ortholog is 63%.
Alternative seed ortholog is H3G8J0 (22 bits away from this cluster)

Group of orthologs #1600. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.ramorum:166

H3BC90              	100.00%		H3H3X6              	100.00%
Bootstrap support for H3BC90 as seed ortholog is 100%.
Bootstrap support for H3H3X6 as seed ortholog is 100%.

Group of orthologs #1601. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:165

H2ZZP4              	100.00%		H3G9Z2              	100.00%
H3A427              	100.00%		H3GA01              	89.47%
H2ZS39              	70.19%		
H3A2S8              	64.42%		
H3A485              	58.65%		
H3A5E7              	34.62%		
H3AQ34              	12.38%		
Bootstrap support for H2ZZP4 as seed ortholog is 98%.
Bootstrap support for H3A427 as seed ortholog is 99%.
Bootstrap support for H3G9Z2 as seed ortholog is 100%.

Group of orthologs #1602. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:83

H3B1D9              	100.00%		H3H811              	100.00%
H3A2G0              	6.42%		H3H5A3              	92.43%
Bootstrap support for H3B1D9 as seed ortholog is 90%.
Bootstrap support for H3H811 as seed ortholog is 98%.

Group of orthologs #1603. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:165

H3ALY6              	100.00%		H3GA71              	100.00%
                    	       		H3G9U1              	100.00%
Bootstrap support for H3ALY6 as seed ortholog is 100%.
Bootstrap support for H3GA71 as seed ortholog is 100%.
Bootstrap support for H3G9U1 as seed ortholog is 100%.

Group of orthologs #1604. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:165

H3AJE5              	100.00%		H3G6N6              	100.00%
Bootstrap support for H3AJE5 as seed ortholog is 97%.
Bootstrap support for H3G6N6 as seed ortholog is 100%.

Group of orthologs #1605. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:165

H3AZJ2              	100.00%		H3G6T3              	100.00%
Bootstrap support for H3AZJ2 as seed ortholog is 100%.
Bootstrap support for H3G6T3 as seed ortholog is 100%.

Group of orthologs #1606. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:165

H3A7P0              	100.00%		H3GVN0              	100.00%
Bootstrap support for H3A7P0 as seed ortholog is 100%.
Bootstrap support for H3GVN0 as seed ortholog is 100%.

Group of orthologs #1607. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:123

H3B2Y9              	100.00%		H3GAL5              	100.00%
Bootstrap support for H3B2Y9 as seed ortholog is 100%.
Bootstrap support for H3GAL5 as seed ortholog is 100%.

Group of orthologs #1608. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:68

H3B0X0              	100.00%		H3GI19              	100.00%
Bootstrap support for H3B0X0 as seed ortholog is 94%.
Bootstrap support for H3GI19 as seed ortholog is 93%.

Group of orthologs #1609. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:71

H3BDK9              	100.00%		H3GER7              	100.00%
Bootstrap support for H3BDK9 as seed ortholog is 100%.
Bootstrap support for H3GER7 as seed ortholog is 98%.

Group of orthologs #1610. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:165

H3B6P2              	100.00%		H3GU14              	100.00%
Bootstrap support for H3B6P2 as seed ortholog is 98%.
Bootstrap support for H3GU14 as seed ortholog is 100%.

Group of orthologs #1611. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:165

H3BHA6              	100.00%		H3GVM4              	100.00%
Bootstrap support for H3BHA6 as seed ortholog is 100%.
Bootstrap support for H3GVM4 as seed ortholog is 100%.

Group of orthologs #1612. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.ramorum:56

H3B2U7              	100.00%		H3HCJ6              	100.00%
Bootstrap support for H3B2U7 as seed ortholog is 100%.
Bootstrap support for H3HCJ6 as seed ortholog is 89%.

Group of orthologs #1613. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:73

H3A9I2              	100.00%		H3GA89              	100.00%
H3B637              	100.00%		H3GYI2              	100.00%
H3A410              	100.00%		H3GYI3              	100.00%
H3AMU1              	100.00%		H3GYI4              	73.03%
H3AQY1              	72.03%		H3G620              	30.93%
H3A409              	50.86%		
Bootstrap support for H3A9I2 as seed ortholog is 100%.
Bootstrap support for H3B637 as seed ortholog is 100%.
Bootstrap support for H3A410 as seed ortholog is 100%.
Bootstrap support for H3AMU1 as seed ortholog is 100%.
Bootstrap support for H3GA89 as seed ortholog is 95%.
Bootstrap support for H3GYI2 as seed ortholog is 91%.
Bootstrap support for H3GYI3 as seed ortholog is 93%.

Group of orthologs #1614. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:56

H3B1M9              	100.00%		H3GYP8              	100.00%
H2ZZV4              	33.18%		
H3A5Z4              	32.86%		
H3B4C1              	30.83%		
H3ABJ7              	18.62%		
Bootstrap support for H3B1M9 as seed ortholog is 100%.
Bootstrap support for H3GYP8 as seed ortholog is 91%.

Group of orthologs #1615. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.ramorum:164

H3AYS1              	100.00%		H3GTS8              	100.00%
H2ZU08              	57.83%		H3GFE6              	18.34%
Bootstrap support for H3AYS1 as seed ortholog is 64%.
Alternative seed ortholog is H3A8F1 (16 bits away from this cluster)
Bootstrap support for H3GTS8 as seed ortholog is 100%.

Group of orthologs #1616. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:39

H3B1M5              	100.00%		H3HDP8              	100.00%
H3AFD4              	21.61%		
Bootstrap support for H3B1M5 as seed ortholog is 100%.
Bootstrap support for H3HDP8 as seed ortholog is 79%.

Group of orthologs #1617. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:164

H3ALY0              	100.00%		H3GHZ3              	100.00%
Bootstrap support for H3ALY0 as seed ortholog is 100%.
Bootstrap support for H3GHZ3 as seed ortholog is 100%.

Group of orthologs #1618. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:164

H3AMG3              	100.00%		H3GX87              	100.00%
Bootstrap support for H3AMG3 as seed ortholog is 99%.
Bootstrap support for H3GX87 as seed ortholog is 100%.

Group of orthologs #1619. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:164

H3BCF6              	100.00%		H3GD40              	100.00%
Bootstrap support for H3BCF6 as seed ortholog is 100%.
Bootstrap support for H3GD40 as seed ortholog is 100%.

Group of orthologs #1620. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.ramorum:164

H3AK71              	100.00%		H3HE08              	100.00%
Bootstrap support for H3AK71 as seed ortholog is 100%.
Bootstrap support for H3HE08 as seed ortholog is 100%.

Group of orthologs #1621. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:163

H3B0L6              	100.00%		H3GLB9              	100.00%
H3ABD2              	54.42%		
H3ADK6              	19.57%		
Bootstrap support for H3B0L6 as seed ortholog is 100%.
Bootstrap support for H3GLB9 as seed ortholog is 100%.

Group of orthologs #1622. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:18

H3BG70              	100.00%		H3GBR4              	100.00%
H3BGR3              	44.73%		
Bootstrap support for H3BG70 as seed ortholog is 84%.
Bootstrap support for H3GBR4 as seed ortholog is 65%.
Alternative seed ortholog is H3GZ43 (18 bits away from this cluster)

Group of orthologs #1623. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:32

H3AJ63              	100.00%		H3H4A2              	100.00%
                    	       		H3H3P5              	38.22%
Bootstrap support for H3AJ63 as seed ortholog is 98%.
Bootstrap support for H3H4A2 as seed ortholog is 82%.

Group of orthologs #1624. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:163

H3AB44              	100.00%		H3G545              	100.00%
Bootstrap support for H3AB44 as seed ortholog is 100%.
Bootstrap support for H3G545 as seed ortholog is 100%.

Group of orthologs #1625. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:163

H2ZSG7              	100.00%		H3GLV6              	100.00%
Bootstrap support for H2ZSG7 as seed ortholog is 100%.
Bootstrap support for H3GLV6 as seed ortholog is 100%.

Group of orthologs #1626. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:34

H2ZYH4              	100.00%		H3GLX5              	100.00%
Bootstrap support for H2ZYH4 as seed ortholog is 100%.
Bootstrap support for H3GLX5 as seed ortholog is 81%.

Group of orthologs #1627. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:163

H3AAQ8              	100.00%		H3GIZ2              	100.00%
Bootstrap support for H3AAQ8 as seed ortholog is 100%.
Bootstrap support for H3GIZ2 as seed ortholog is 100%.

Group of orthologs #1628. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:163

H3A6N9              	100.00%		H3GZX4              	100.00%
Bootstrap support for H3A6N9 as seed ortholog is 79%.
Bootstrap support for H3GZX4 as seed ortholog is 100%.

Group of orthologs #1629. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:163

H3AWU9              	100.00%		H3GXL0              	100.00%
Bootstrap support for H3AWU9 as seed ortholog is 100%.
Bootstrap support for H3GXL0 as seed ortholog is 100%.

Group of orthologs #1630. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.ramorum:163

H3BDL0              	100.00%		H3GVV6              	100.00%
Bootstrap support for H3BDL0 as seed ortholog is 100%.
Bootstrap support for H3GVV6 as seed ortholog is 100%.

Group of orthologs #1631. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.ramorum:14

H2ZT11              	100.00%		H3HBR9              	100.00%
H3B6R1              	77.97%		H3GXL6              	26.60%
H3BBU5              	41.47%		
Bootstrap support for H2ZT11 as seed ortholog is 100%.
Bootstrap support for H3HBR9 as seed ortholog is 60%.
Alternative seed ortholog is H3GLC0 (14 bits away from this cluster)

Group of orthologs #1632. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:162

M3XJ20              	100.00%		H3GJS7              	100.00%
H3AF61              	39.53%		
Bootstrap support for M3XJ20 as seed ortholog is 88%.
Bootstrap support for H3GJS7 as seed ortholog is 100%.

Group of orthologs #1633. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.ramorum:162

H2ZTC9              	100.00%		H3GNM1              	100.00%
Bootstrap support for H2ZTC9 as seed ortholog is 100%.
Bootstrap support for H3GNM1 as seed ortholog is 100%.

Group of orthologs #1634. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.ramorum:42

H3A6S0              	100.00%		H3GE05              	100.00%
Bootstrap support for H3A6S0 as seed ortholog is 100%.
Bootstrap support for H3GE05 as seed ortholog is 96%.

Group of orthologs #1635. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.ramorum:162

H2ZTI6              	100.00%		H3HB09              	100.00%
Bootstrap support for H2ZTI6 as seed ortholog is 100%.
Bootstrap support for H3HB09 as seed ortholog is 100%.

Group of orthologs #1636. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.ramorum:162

H3ANJ4              	100.00%		H3GTD7              	100.00%
Bootstrap support for H3ANJ4 as seed ortholog is 100%.
Bootstrap support for H3GTD7 as seed ortholog is 100%.

Group of orthologs #1637. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.ramorum:162

H3BFN3              	100.00%		H3GW59              	100.00%
Bootstrap support for H3BFN3 as seed ortholog is 100%.
Bootstrap support for H3GW59 as seed ortholog is 100%.

Group of orthologs #1638. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:161

H3AJB0              	100.00%		H3G5A2              	100.00%
M3XKU0              	19.05%		
Bootstrap support for H3AJB0 as seed ortholog is 100%.
Bootstrap support for H3G5A2 as seed ortholog is 100%.

Group of orthologs #1639. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:161

H3A9F9              	100.00%		H3H5P8              	100.00%
                    	       		H3H0H4              	75.35%
Bootstrap support for H3A9F9 as seed ortholog is 100%.
Bootstrap support for H3H5P8 as seed ortholog is 100%.

Group of orthologs #1640. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:53

H3AJ91              	100.00%		H3HC35              	100.00%
H3AUK6              	12.97%		
Bootstrap support for H3AJ91 as seed ortholog is 99%.
Bootstrap support for H3HC35 as seed ortholog is 98%.

Group of orthologs #1641. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:161

H3BAA5              	100.00%		H3HE74              	100.00%
H3ADT2              	38.63%		
Bootstrap support for H3BAA5 as seed ortholog is 100%.
Bootstrap support for H3HE74 as seed ortholog is 100%.

Group of orthologs #1642. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:161

H3ALI4              	100.00%		H3GHB9              	100.00%
Bootstrap support for H3ALI4 as seed ortholog is 100%.
Bootstrap support for H3GHB9 as seed ortholog is 100%.

Group of orthologs #1643. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:161

H3AWK8              	100.00%		H3GGQ6              	100.00%
Bootstrap support for H3AWK8 as seed ortholog is 100%.
Bootstrap support for H3GGQ6 as seed ortholog is 100%.

Group of orthologs #1644. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:161

H3B8D4              	100.00%		H3GGQ4              	100.00%
Bootstrap support for H3B8D4 as seed ortholog is 82%.
Bootstrap support for H3GGQ4 as seed ortholog is 100%.

Group of orthologs #1645. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.ramorum:161

H3ADU9              	100.00%		H3HDB9              	100.00%
Bootstrap support for H3ADU9 as seed ortholog is 100%.
Bootstrap support for H3HDB9 as seed ortholog is 100%.

Group of orthologs #1646. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:18

H3B721              	100.00%		H3G8W3              	100.00%
                    	       		H3GB45              	100.00%
                    	       		H3H7P7              	67.81%
                    	       		H3GIR3              	41.30%
                    	       		H3GDL1              	30.16%
                    	       		H3GDX5              	24.90%
                    	       		H3G5J8              	22.06%
                    	       		H3GIR5              	18.42%
                    	       		H3GIR6              	17.81%
                    	       		H3HA53              	13.56%
Bootstrap support for H3B721 as seed ortholog is 94%.
Bootstrap support for H3G8W3 as seed ortholog is 65%.
Alternative seed ortholog is H3GEB7 (18 bits away from this cluster)
Bootstrap support for H3GB45 as seed ortholog is 65%.
Alternative seed ortholog is H3GEB7 (18 bits away from this cluster)

Group of orthologs #1647. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H3BES0              	100.00%		H3GWM0              	100.00%
H3AJ57              	34.95%		
H3ACX0              	31.64%		
H3AI36              	16.65%		
Bootstrap support for H3BES0 as seed ortholog is 100%.
Bootstrap support for H3GWM0 as seed ortholog is 100%.

Group of orthologs #1648. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:160

H3BDA3              	100.00%		H3G6M7              	100.00%
H3B5R9              	7.26%		
Bootstrap support for H3BDA3 as seed ortholog is 100%.
Bootstrap support for H3G6M7 as seed ortholog is 100%.

Group of orthologs #1649. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H3APE2              	100.00%		H3H918              	100.00%
H3BEX4              	47.20%		
Bootstrap support for H3APE2 as seed ortholog is 100%.
Bootstrap support for H3H918 as seed ortholog is 100%.

Group of orthologs #1650. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H3AJT2              	100.00%		H3G8T8              	100.00%
Bootstrap support for H3AJT2 as seed ortholog is 100%.
Bootstrap support for H3G8T8 as seed ortholog is 100%.

Group of orthologs #1651. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:8

H3ACF2              	100.00%		H3GRW8              	100.00%
Bootstrap support for H3ACF2 as seed ortholog is 52%.
Alternative seed ortholog is H3B1C5 (3 bits away from this cluster)
Bootstrap support for H3GRW8 as seed ortholog is 68%.
Alternative seed ortholog is H3GYX8 (8 bits away from this cluster)

Group of orthologs #1652. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H2ZZG1              	100.00%		H3HDB3              	100.00%
Bootstrap support for H2ZZG1 as seed ortholog is 100%.
Bootstrap support for H3HDB3 as seed ortholog is 100%.

Group of orthologs #1653. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H3AH94              	100.00%		H3GZW9              	100.00%
Bootstrap support for H3AH94 as seed ortholog is 100%.
Bootstrap support for H3GZW9 as seed ortholog is 100%.

Group of orthologs #1654. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H3ADA6              	100.00%		H3HAQ8              	100.00%
Bootstrap support for H3ADA6 as seed ortholog is 100%.
Bootstrap support for H3HAQ8 as seed ortholog is 100%.

Group of orthologs #1655. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

H3BB30              	100.00%		H3GIJ7              	100.00%
Bootstrap support for H3BB30 as seed ortholog is 100%.
Bootstrap support for H3GIJ7 as seed ortholog is 100%.

Group of orthologs #1656. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.ramorum:160

M3XKV7              	100.00%		H3GGE1              	100.00%
Bootstrap support for M3XKV7 as seed ortholog is 100%.
Bootstrap support for H3GGE1 as seed ortholog is 100%.

Group of orthologs #1657. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.ramorum:47

H3AN37              	100.00%		H3H2F1              	100.00%
H3B8E1              	100.00%		H3GU04              	100.00%
H3AFS7              	100.00%		H3HE84              	29.82%
H3A9Q1              	71.28%		H3HCX1              	26.97%
H3ATP4              	31.63%		H3GYV8              	14.48%
H3AQU0              	24.86%		H3H5C0              	14.48%
                    	       		H3GM04              	12.72%
Bootstrap support for H3AN37 as seed ortholog is 98%.
Bootstrap support for H3B8E1 as seed ortholog is 97%.
Bootstrap support for H3AFS7 as seed ortholog is 97%.
Bootstrap support for H3H2F1 as seed ortholog is 87%.
Bootstrap support for H3GU04 as seed ortholog is 80%.

Group of orthologs #1658. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3B9U4              	100.00%		H3GUX6              	100.00%
H3AEI9              	39.16%		
H3ABR7              	18.78%		
H3BDG0              	12.52%		
Bootstrap support for H3B9U4 as seed ortholog is 100%.
Bootstrap support for H3GUX6 as seed ortholog is 100%.

Group of orthologs #1659. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:68

H2ZS94              	100.00%		H3GA70              	100.00%
H3ATC7              	24.67%		H3GM06              	19.08%
Bootstrap support for H2ZS94 as seed ortholog is 84%.
Bootstrap support for H3GA70 as seed ortholog is 92%.

Group of orthologs #1660. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3ACP4              	100.00%		H3GZU9              	100.00%
H3ANU1              	23.93%		
Bootstrap support for H3ACP4 as seed ortholog is 100%.
Bootstrap support for H3GZU9 as seed ortholog is 100%.

Group of orthologs #1661. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3AIM6              	100.00%		H3GY73              	100.00%
H3AA52              	52.30%		
Bootstrap support for H3AIM6 as seed ortholog is 100%.
Bootstrap support for H3GY73 as seed ortholog is 100%.

Group of orthologs #1662. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.ramorum:159

H3BAW5              	100.00%		H3H1S8              	100.00%
H3AFR4              	42.45%		
Bootstrap support for H3BAW5 as seed ortholog is 90%.
Bootstrap support for H3H1S8 as seed ortholog is 100%.

Group of orthologs #1663. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3AL79              	100.00%		H3GCG0              	100.00%
Bootstrap support for H3AL79 as seed ortholog is 100%.
Bootstrap support for H3GCG0 as seed ortholog is 100%.

Group of orthologs #1664. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3A4L9              	100.00%		H3GW43              	100.00%
Bootstrap support for H3A4L9 as seed ortholog is 100%.
Bootstrap support for H3GW43 as seed ortholog is 100%.

Group of orthologs #1665. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3AI91              	100.00%		H3GPL8              	100.00%
Bootstrap support for H3AI91 as seed ortholog is 100%.
Bootstrap support for H3GPL8 as seed ortholog is 100%.

Group of orthologs #1666. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:35

H3A4N1              	100.00%		H3H1C7              	100.00%
Bootstrap support for H3A4N1 as seed ortholog is 99%.
Bootstrap support for H3H1C7 as seed ortholog is 89%.

Group of orthologs #1667. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.ramorum:159

H3B9D0              	100.00%		H3G808              	100.00%
Bootstrap support for H3B9D0 as seed ortholog is 100%.
Bootstrap support for H3G808 as seed ortholog is 100%.

Group of orthologs #1668. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3A6C2              	100.00%		H3GK14              	100.00%
H3B6K9              	7.26%		
H3AKK0              	6.92%		
Bootstrap support for H3A6C2 as seed ortholog is 100%.
Bootstrap support for H3GK14 as seed ortholog is 100%.

Group of orthologs #1669. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3B8R7              	100.00%		H3G701              	100.00%
                    	       		H3GSV1              	80.69%
Bootstrap support for H3B8R7 as seed ortholog is 100%.
Bootstrap support for H3G701 as seed ortholog is 100%.

Group of orthologs #1670. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3AXG8              	100.00%		H3GMZ6              	100.00%
H3B6R3              	7.24%		
Bootstrap support for H3AXG8 as seed ortholog is 100%.
Bootstrap support for H3GMZ6 as seed ortholog is 100%.

Group of orthologs #1671. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:158

H3BG52              	100.00%		H3H7F2              	100.00%
H3BAU6              	31.88%		
Bootstrap support for H3BG52 as seed ortholog is 77%.
Bootstrap support for H3H7F2 as seed ortholog is 100%.

Group of orthologs #1672. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3A243              	100.00%		H3G8N7              	100.00%
Bootstrap support for H3A243 as seed ortholog is 100%.
Bootstrap support for H3G8N7 as seed ortholog is 100%.

Group of orthologs #1673. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3ATQ3              	100.00%		H3GA40              	100.00%
Bootstrap support for H3ATQ3 as seed ortholog is 100%.
Bootstrap support for H3GA40 as seed ortholog is 100%.

Group of orthologs #1674. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:51

H3AYP2              	100.00%		H3G915              	100.00%
Bootstrap support for H3AYP2 as seed ortholog is 98%.
Bootstrap support for H3G915 as seed ortholog is 97%.

Group of orthologs #1675. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3AWY5              	100.00%		H3GNV0              	100.00%
Bootstrap support for H3AWY5 as seed ortholog is 100%.
Bootstrap support for H3GNV0 as seed ortholog is 100%.

Group of orthologs #1676. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3BFC0              	100.00%		H3G8D5              	100.00%
Bootstrap support for H3BFC0 as seed ortholog is 100%.
Bootstrap support for H3G8D5 as seed ortholog is 100%.

Group of orthologs #1677. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.ramorum:158

H3BHU1              	100.00%		H3GQS8              	100.00%
Bootstrap support for H3BHU1 as seed ortholog is 100%.
Bootstrap support for H3GQS8 as seed ortholog is 100%.

Group of orthologs #1678. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:157

H3A7L7              	100.00%		H3G9I6              	100.00%
H3AFA1              	24.48%		
H3AHE6              	19.76%		
M3XIQ8              	19.41%		
Bootstrap support for H3A7L7 as seed ortholog is 100%.
Bootstrap support for H3G9I6 as seed ortholog is 100%.

Group of orthologs #1679. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:70

H3A667              	100.00%		H3GVK9              	100.00%
Bootstrap support for H3A667 as seed ortholog is 93%.
Bootstrap support for H3GVK9 as seed ortholog is 97%.

Group of orthologs #1680. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:157

H3AWL5              	100.00%		H3GI20              	100.00%
Bootstrap support for H3AWL5 as seed ortholog is 99%.
Bootstrap support for H3GI20 as seed ortholog is 100%.

Group of orthologs #1681. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:157

H3AYZ5              	100.00%		H3GH02              	100.00%
Bootstrap support for H3AYZ5 as seed ortholog is 100%.
Bootstrap support for H3GH02 as seed ortholog is 100%.

Group of orthologs #1682. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:99

H3B808              	100.00%		H3GW57              	100.00%
Bootstrap support for H3B808 as seed ortholog is 98%.
Bootstrap support for H3GW57 as seed ortholog is 99%.

Group of orthologs #1683. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:157

H3B8N2              	100.00%		H3GZT9              	100.00%
Bootstrap support for H3B8N2 as seed ortholog is 100%.
Bootstrap support for H3GZT9 as seed ortholog is 100%.

Group of orthologs #1684. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:42

H3AST5              	100.00%		H3HDG4              	100.00%
Bootstrap support for H3AST5 as seed ortholog is 96%.
Bootstrap support for H3HDG4 as seed ortholog is 75%.

Group of orthologs #1685. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.ramorum:48

H3BG21              	100.00%		H3GY19              	100.00%
Bootstrap support for H3BG21 as seed ortholog is 100%.
Bootstrap support for H3GY19 as seed ortholog is 99%.

Group of orthologs #1686. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.ramorum:156

H3A6X6              	100.00%		H3GPA9              	100.00%
H3AY32              	30.45%		
H3AZ90              	27.67%		
H2ZVV3              	8.23%		
H3A8I3              	6.84%		
Bootstrap support for H3A6X6 as seed ortholog is 92%.
Bootstrap support for H3GPA9 as seed ortholog is 100%.

Group of orthologs #1687. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.ramorum:3

H3ABJ3              	100.00%		H3GIL4              	100.00%
H2ZVV7              	11.47%		
Bootstrap support for H3ABJ3 as seed ortholog is 53%.
Alternative seed ortholog is H3AQ80 (24 bits away from this cluster)
Bootstrap support for H3GIL4 as seed ortholog is 54%.
Alternative seed ortholog is H3GJB3 (3 bits away from this cluster)

Group of orthologs #1688. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.ramorum:62

H3AVR2              	100.00%		H3G694              	100.00%
H3BI91              	55.34%		
Bootstrap support for H3AVR2 as seed ortholog is 98%.
Bootstrap support for H3G694 as seed ortholog is 99%.

Group of orthologs #1689. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:104

H3AS08              	100.00%		H3GK11              	100.00%
                    	       		H3HB48              	10.14%
Bootstrap support for H3AS08 as seed ortholog is 99%.
Bootstrap support for H3GK11 as seed ortholog is 99%.

Group of orthologs #1690. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

H2ZV50              	100.00%		H3GZT6              	100.00%
Bootstrap support for H2ZV50 as seed ortholog is 100%.
Bootstrap support for H3GZT6 as seed ortholog is 100%.

Group of orthologs #1691. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

H3B1C3              	100.00%		H3GKL5              	100.00%
Bootstrap support for H3B1C3 as seed ortholog is 100%.
Bootstrap support for H3GKL5 as seed ortholog is 100%.

Group of orthologs #1692. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

H3AA97              	100.00%		H3HBE3              	100.00%
Bootstrap support for H3AA97 as seed ortholog is 100%.
Bootstrap support for H3HBE3 as seed ortholog is 100%.

Group of orthologs #1693. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

M3XJ75              	100.00%		H3G946              	100.00%
Bootstrap support for M3XJ75 as seed ortholog is 100%.
Bootstrap support for H3G946 as seed ortholog is 100%.

Group of orthologs #1694. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

H3BAT4              	100.00%		H3GHP9              	100.00%
Bootstrap support for H3BAT4 as seed ortholog is 100%.
Bootstrap support for H3GHP9 as seed ortholog is 100%.

Group of orthologs #1695. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

H3B7Q4              	100.00%		H3GTZ7              	100.00%
Bootstrap support for H3B7Q4 as seed ortholog is 100%.
Bootstrap support for H3GTZ7 as seed ortholog is 100%.

Group of orthologs #1696. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.ramorum:156

H3B8D0              	100.00%		H3HCJ4              	100.00%
Bootstrap support for H3B8D0 as seed ortholog is 100%.
Bootstrap support for H3HCJ4 as seed ortholog is 100%.

Group of orthologs #1697. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.ramorum:74

H3BGI6              	100.00%		H3H240              	100.00%
H3BGH6              	72.02%		
H3B127              	8.35%		
Bootstrap support for H3BGI6 as seed ortholog is 100%.
Bootstrap support for H3H240 as seed ortholog is 94%.

Group of orthologs #1698. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.ramorum:60

H3BI88              	100.00%		H3GDD4              	100.00%
H3BI85              	64.26%		
Bootstrap support for H3BI88 as seed ortholog is 100%.
Bootstrap support for H3GDD4 as seed ortholog is 90%.

Group of orthologs #1699. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.ramorum:53

M3XKY6              	100.00%		H3G604              	100.00%
                    	       		H3G605              	54.01%
                    	       		H3GPF0              	38.88%
                    	       		H3GDZ7              	38.07%
                    	       		H3G606              	36.47%
                    	       		H3G5B9              	33.37%
Bootstrap support for M3XKY6 as seed ortholog is 89%.
Bootstrap support for H3G604 as seed ortholog is 88%.

Group of orthologs #1700. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.ramorum:111

H3BFZ7              	100.00%		H3GPN2              	100.00%
H3B563              	26.01%		H3GSC1              	22.43%
Bootstrap support for H3BFZ7 as seed ortholog is 100%.
Bootstrap support for H3GPN2 as seed ortholog is 99%.

Group of orthologs #1701. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:154

H3ABR3              	100.00%		H3GD10              	100.00%
Bootstrap support for H3ABR3 as seed ortholog is 36%.
Alternative seed ortholog is H3AVI4 (40 bits away from this cluster)
Bootstrap support for H3GD10 as seed ortholog is 100%.

Group of orthologs #1702. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.ramorum:154

H3AEV0              	100.00%		H3GK10              	100.00%
Bootstrap support for H3AEV0 as seed ortholog is 100%.
Bootstrap support for H3GK10 as seed ortholog is 100%.

Group of orthologs #1703. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.ramorum:36

H3AX79              	100.00%		H3G8U6              	100.00%
Bootstrap support for H3AX79 as seed ortholog is 100%.
Bootstrap support for H3G8U6 as seed ortholog is 92%.

Group of orthologs #1704. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.ramorum:50

H3BCK6              	100.00%		H3GUA0              	100.00%
Bootstrap support for H3BCK6 as seed ortholog is 100%.
Bootstrap support for H3GUA0 as seed ortholog is 97%.

Group of orthologs #1705. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:107

H3BAR6              	100.00%		H3HAV1              	100.00%
Bootstrap support for H3BAR6 as seed ortholog is 99%.
Bootstrap support for H3HAV1 as seed ortholog is 98%.

Group of orthologs #1706. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:92

H2ZYG4              	100.00%		H3GUW7              	100.00%
H3AE15              	65.86%		
H3A2S4              	63.14%		
Bootstrap support for H2ZYG4 as seed ortholog is 100%.
Bootstrap support for H3GUW7 as seed ortholog is 99%.

Group of orthologs #1707. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:66

H3AF04              	100.00%		H3HBF5              	100.00%
H3B9H3              	18.64%		
Bootstrap support for H3AF04 as seed ortholog is 100%.
Bootstrap support for H3HBF5 as seed ortholog is 99%.

Group of orthologs #1708. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:102

H2ZTK0              	100.00%		H3G6Y3              	100.00%
Bootstrap support for H2ZTK0 as seed ortholog is 98%.
Bootstrap support for H3G6Y3 as seed ortholog is 100%.

Group of orthologs #1709. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:153

H3A3X2              	100.00%		H3GEB9              	100.00%
Bootstrap support for H3A3X2 as seed ortholog is 100%.
Bootstrap support for H3GEB9 as seed ortholog is 100%.

Group of orthologs #1710. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:153

H3B0N0              	100.00%		H3GA04              	100.00%
Bootstrap support for H3B0N0 as seed ortholog is 100%.
Bootstrap support for H3GA04 as seed ortholog is 100%.

Group of orthologs #1711. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:107

H3ADS7              	100.00%		H3GUF3              	100.00%
Bootstrap support for H3ADS7 as seed ortholog is 100%.
Bootstrap support for H3GUF3 as seed ortholog is 99%.

Group of orthologs #1712. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:153

H3B0B0              	100.00%		H3GKR1              	100.00%
Bootstrap support for H3B0B0 as seed ortholog is 100%.
Bootstrap support for H3GKR1 as seed ortholog is 100%.

Group of orthologs #1713. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:74

H3BIQ2              	100.00%		H3GW64              	100.00%
Bootstrap support for H3BIQ2 as seed ortholog is 89%.
Bootstrap support for H3GW64 as seed ortholog is 97%.

Group of orthologs #1714. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:153

H3B798              	100.00%		H3H5Y1              	100.00%
Bootstrap support for H3B798 as seed ortholog is 100%.
Bootstrap support for H3H5Y1 as seed ortholog is 100%.

Group of orthologs #1715. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.ramorum:153

M3XH86              	100.00%		H3HBG0              	100.00%
Bootstrap support for M3XH86 as seed ortholog is 100%.
Bootstrap support for H3HBG0 as seed ortholog is 100%.

Group of orthologs #1716. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:153

M3XJY7              	100.00%		H3HBU3              	100.00%
Bootstrap support for M3XJY7 as seed ortholog is 99%.
Bootstrap support for H3HBU3 as seed ortholog is 100%.

Group of orthologs #1717. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:53

H3AL49              	100.00%		H3H0J3              	100.00%
H3A818              	48.34%		
H3B1W9              	25.24%		
H2ZUI9              	23.32%		
Bootstrap support for H3AL49 as seed ortholog is 92%.
Bootstrap support for H3H0J3 as seed ortholog is 98%.

Group of orthologs #1718. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:152

H2ZWM6              	100.00%		H3G8G5              	100.00%
                    	       		H3G8G4              	41.15%
Bootstrap support for H2ZWM6 as seed ortholog is 100%.
Bootstrap support for H3G8G5 as seed ortholog is 100%.

Group of orthologs #1719. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:51

H3AKL4              	100.00%		H3GXG5              	100.00%
H3B5X1              	35.97%		
Bootstrap support for H3AKL4 as seed ortholog is 71%.
Alternative seed ortholog is H3B873 (17 bits away from this cluster)
Bootstrap support for H3GXG5 as seed ortholog is 93%.

Group of orthologs #1720. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:152

H3A886              	100.00%		H3HD49              	100.00%
                    	       		H3GUB2              	64.00%
Bootstrap support for H3A886 as seed ortholog is 100%.
Bootstrap support for H3HD49 as seed ortholog is 100%.

Group of orthologs #1721. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:111

H2ZVQ1              	100.00%		H3G8U8              	100.00%
Bootstrap support for H2ZVQ1 as seed ortholog is 100%.
Bootstrap support for H3G8U8 as seed ortholog is 100%.

Group of orthologs #1722. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:152

H3ADE0              	100.00%		H3GBT0              	100.00%
Bootstrap support for H3ADE0 as seed ortholog is 100%.
Bootstrap support for H3GBT0 as seed ortholog is 100%.

Group of orthologs #1723. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:95

H3AGS5              	100.00%		H3GPR4              	100.00%
Bootstrap support for H3AGS5 as seed ortholog is 88%.
Bootstrap support for H3GPR4 as seed ortholog is 99%.

Group of orthologs #1724. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:152

H3AZG4              	100.00%		H3GF06              	100.00%
Bootstrap support for H3AZG4 as seed ortholog is 100%.
Bootstrap support for H3GF06 as seed ortholog is 100%.

Group of orthologs #1725. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:101

H3AGP5              	100.00%		H3GW85              	100.00%
Bootstrap support for H3AGP5 as seed ortholog is 100%.
Bootstrap support for H3GW85 as seed ortholog is 99%.

Group of orthologs #1726. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.ramorum:152

H3APP2              	100.00%		H3GRU5              	100.00%
Bootstrap support for H3APP2 as seed ortholog is 100%.
Bootstrap support for H3GRU5 as seed ortholog is 100%.

Group of orthologs #1727. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3ABZ5              	100.00%		H3GYD4              	100.00%
H3ALG9              	43.79%		H3H4X5              	99.15%
H3ALL1              	39.02%		H3H4X6              	40.92%
H3AW79              	29.05%		H3GYD1              	40.35%
                    	       		H3H7T4              	38.83%
                    	       		H3H4X4              	37.08%
                    	       		H3H6I1              	32.01%
                    	       		H3GYD5              	28.31%
                    	       		H3GYD3              	27.55%
                    	       		H3GHK9              	25.13%
                    	       		H3H5C4              	23.19%
                    	       		H3H8C9              	22.19%
                    	       		H3GYC6              	18.92%
                    	       		H3H4H0              	6.31%
Bootstrap support for H3ABZ5 as seed ortholog is 100%.
Bootstrap support for H3GYD4 as seed ortholog is 100%.

Group of orthologs #1728. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3B5R2              	100.00%		H3GGJ2              	100.00%
H3BBT3              	44.99%		
Bootstrap support for H3B5R2 as seed ortholog is 100%.
Bootstrap support for H3GGJ2 as seed ortholog is 100%.

Group of orthologs #1729. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3A6H4              	100.00%		H3HBN8              	100.00%
H3A5R7              	54.95%		
Bootstrap support for H3A6H4 as seed ortholog is 100%.
Bootstrap support for H3HBN8 as seed ortholog is 100%.

Group of orthologs #1730. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3BG51              	100.00%		H3GSI1              	100.00%
H3AY81              	27.47%		
Bootstrap support for H3BG51 as seed ortholog is 100%.
Bootstrap support for H3GSI1 as seed ortholog is 100%.

Group of orthologs #1731. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H2ZW41              	100.00%		H3GW53              	100.00%
Bootstrap support for H2ZW41 as seed ortholog is 100%.
Bootstrap support for H3GW53 as seed ortholog is 100%.

Group of orthologs #1732. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3AIQ9              	100.00%		H3GBQ0              	100.00%
Bootstrap support for H3AIQ9 as seed ortholog is 100%.
Bootstrap support for H3GBQ0 as seed ortholog is 100%.

Group of orthologs #1733. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3AB14              	100.00%		H3GQK9              	100.00%
Bootstrap support for H3AB14 as seed ortholog is 100%.
Bootstrap support for H3GQK9 as seed ortholog is 100%.

Group of orthologs #1734. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.ramorum:151

H3AVS5              	100.00%		H3GD84              	100.00%
Bootstrap support for H3AVS5 as seed ortholog is 99%.
Bootstrap support for H3GD84 as seed ortholog is 100%.

Group of orthologs #1735. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3A1P6              	100.00%		H3HD98              	100.00%
Bootstrap support for H3A1P6 as seed ortholog is 100%.
Bootstrap support for H3HD98 as seed ortholog is 100%.

Group of orthologs #1736. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3B2Z7              	100.00%		H3GSB4              	100.00%
Bootstrap support for H3B2Z7 as seed ortholog is 100%.
Bootstrap support for H3GSB4 as seed ortholog is 100%.

Group of orthologs #1737. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.ramorum:151

H3BI49              	100.00%		H3GWN1              	100.00%
Bootstrap support for H3BI49 as seed ortholog is 100%.
Bootstrap support for H3GWN1 as seed ortholog is 100%.

Group of orthologs #1738. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3B6N6              	100.00%		H3GBD7              	100.00%
H3A4A9              	61.14%		
H2ZYU8              	47.24%		
H3A745              	35.15%		
Bootstrap support for H3B6N6 as seed ortholog is 100%.
Bootstrap support for H3GBD7 as seed ortholog is 100%.

Group of orthologs #1739. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3AEF1              	100.00%		H3GUN7              	100.00%
                    	       		H3GUN4              	10.48%
Bootstrap support for H3AEF1 as seed ortholog is 100%.
Bootstrap support for H3GUN7 as seed ortholog is 100%.

Group of orthologs #1740. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:80

H3A1T0              	100.00%		H3HA72              	100.00%
                    	       		H3GVA6              	44.04%
Bootstrap support for H3A1T0 as seed ortholog is 100%.
Bootstrap support for H3HA72 as seed ortholog is 99%.

Group of orthologs #1741. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3A6W9              	100.00%		H3H8M5              	100.00%
                    	       		H3GCJ1              	90.96%
Bootstrap support for H3A6W9 as seed ortholog is 100%.
Bootstrap support for H3H8M5 as seed ortholog is 100%.

Group of orthologs #1742. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3A269              	100.00%		H3G7Q8              	100.00%
Bootstrap support for H3A269 as seed ortholog is 100%.
Bootstrap support for H3G7Q8 as seed ortholog is 100%.

Group of orthologs #1743. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3ASN9              	100.00%		H3GBE8              	100.00%
Bootstrap support for H3ASN9 as seed ortholog is 100%.
Bootstrap support for H3GBE8 as seed ortholog is 100%.

Group of orthologs #1744. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3AWQ0              	100.00%		H3GAN1              	100.00%
Bootstrap support for H3AWQ0 as seed ortholog is 100%.
Bootstrap support for H3GAN1 as seed ortholog is 100%.

Group of orthologs #1745. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

H3AVV5              	100.00%		H3GS81              	100.00%
Bootstrap support for H3AVV5 as seed ortholog is 100%.
Bootstrap support for H3GS81 as seed ortholog is 100%.

Group of orthologs #1746. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.ramorum:150

M3XHQ1              	100.00%		H3GHR0              	100.00%
Bootstrap support for M3XHQ1 as seed ortholog is 100%.
Bootstrap support for H3GHR0 as seed ortholog is 100%.

Group of orthologs #1747. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.ramorum:74

M3XLI2              	100.00%		H3GHD8              	100.00%
Bootstrap support for M3XLI2 as seed ortholog is 63%.
Alternative seed ortholog is H3B006 (16 bits away from this cluster)
Bootstrap support for H3GHD8 as seed ortholog is 91%.

Group of orthologs #1748. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:149

H3AEH4              	100.00%		H3G8Y2              	100.00%
H2ZWF4              	76.80%		H3H2X8              	51.96%
Bootstrap support for H3AEH4 as seed ortholog is 100%.
Bootstrap support for H3G8Y2 as seed ortholog is 100%.

Group of orthologs #1749. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:149

H3AGQ1              	100.00%		H3H1L0              	100.00%
H3AKL9              	5.88%		H3H867              	67.70%
Bootstrap support for H3AGQ1 as seed ortholog is 94%.
Bootstrap support for H3H1L0 as seed ortholog is 100%.

Group of orthologs #1750. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:149

H2ZZH6              	100.00%		H3H3Z6              	100.00%
Bootstrap support for H2ZZH6 as seed ortholog is 100%.
Bootstrap support for H3H3Z6 as seed ortholog is 100%.

Group of orthologs #1751. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:149

H3B183              	100.00%		H3G8P8              	100.00%
Bootstrap support for H3B183 as seed ortholog is 100%.
Bootstrap support for H3G8P8 as seed ortholog is 100%.

Group of orthologs #1752. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:149

H3BCA1              	100.00%		H3GAA6              	100.00%
Bootstrap support for H3BCA1 as seed ortholog is 100%.
Bootstrap support for H3GAA6 as seed ortholog is 100%.

Group of orthologs #1753. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:31

H3BF67              	100.00%		H3G7X8              	100.00%
Bootstrap support for H3BF67 as seed ortholog is 98%.
Bootstrap support for H3G7X8 as seed ortholog is 87%.

Group of orthologs #1754. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:149

H3ATL3              	100.00%		H3H058              	100.00%
Bootstrap support for H3ATL3 as seed ortholog is 100%.
Bootstrap support for H3H058 as seed ortholog is 100%.

Group of orthologs #1755. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.ramorum:149

M3XLP1              	100.00%		H3GCH1              	100.00%
Bootstrap support for M3XLP1 as seed ortholog is 100%.
Bootstrap support for H3GCH1 as seed ortholog is 100%.

Group of orthologs #1756. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:33

H3A1N6              	100.00%		H3GRN0              	100.00%
H3B4S3              	86.70%		
H3B8H0              	50.21%		
Bootstrap support for H3A1N6 as seed ortholog is 88%.
Bootstrap support for H3GRN0 as seed ortholog is 92%.

Group of orthologs #1757. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:52

H3B5J1              	100.00%		H3GCA8              	100.00%
H3A226              	43.52%		
H3AD42              	41.67%		
Bootstrap support for H3B5J1 as seed ortholog is 95%.
Bootstrap support for H3GCA8 as seed ortholog is 84%.

Group of orthologs #1758. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:26

H2ZVS1              	100.00%		H3H346              	100.00%
H3AW52              	10.56%		
Bootstrap support for H2ZVS1 as seed ortholog is 100%.
Bootstrap support for H3H346 as seed ortholog is 74%.
Alternative seed ortholog is H3GUF1 (26 bits away from this cluster)

Group of orthologs #1759. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3AGQ4              	100.00%		H3GNV2              	100.00%
H3ABM3              	93.70%		
Bootstrap support for H3AGQ4 as seed ortholog is 100%.
Bootstrap support for H3GNV2 as seed ortholog is 100%.

Group of orthologs #1760. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:100

H3AE10              	100.00%		H3GYW5              	100.00%
H3AB23              	12.45%		
Bootstrap support for H3AE10 as seed ortholog is 100%.
Bootstrap support for H3GYW5 as seed ortholog is 99%.

Group of orthologs #1761. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3ADQ0              	100.00%		H3G7J8              	100.00%
Bootstrap support for H3ADQ0 as seed ortholog is 100%.
Bootstrap support for H3G7J8 as seed ortholog is 100%.

Group of orthologs #1762. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:35

H3AH73              	100.00%		H3GLU7              	100.00%
Bootstrap support for H3AH73 as seed ortholog is 91%.
Bootstrap support for H3GLU7 as seed ortholog is 77%.

Group of orthologs #1763. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3AZS2              	100.00%		H3G9M1              	100.00%
Bootstrap support for H3AZS2 as seed ortholog is 100%.
Bootstrap support for H3G9M1 as seed ortholog is 100%.

Group of orthologs #1764. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3A959              	100.00%		H3GX22              	100.00%
Bootstrap support for H3A959 as seed ortholog is 100%.
Bootstrap support for H3GX22 as seed ortholog is 100%.

Group of orthologs #1765. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:148

H3B2N4              	100.00%		H3G9S4              	100.00%
Bootstrap support for H3B2N4 as seed ortholog is 99%.
Bootstrap support for H3G9S4 as seed ortholog is 100%.

Group of orthologs #1766. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3AI69              	100.00%		H3GVC5              	100.00%
Bootstrap support for H3AI69 as seed ortholog is 100%.
Bootstrap support for H3GVC5 as seed ortholog is 100%.

Group of orthologs #1767. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H2ZWC2              	100.00%		H3HEE6              	100.00%
Bootstrap support for H2ZWC2 as seed ortholog is 100%.
Bootstrap support for H3HEE6 as seed ortholog is 100%.

Group of orthologs #1768. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3AAT5              	100.00%		H3HBH6              	100.00%
Bootstrap support for H3AAT5 as seed ortholog is 100%.
Bootstrap support for H3HBH6 as seed ortholog is 100%.

Group of orthologs #1769. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:148

H3BGH2              	100.00%		H3GJ54              	100.00%
Bootstrap support for H3BGH2 as seed ortholog is 99%.
Bootstrap support for H3GJ54 as seed ortholog is 100%.

Group of orthologs #1770. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.ramorum:148

H3AQV8              	100.00%		H3HCF9              	100.00%
Bootstrap support for H3AQV8 as seed ortholog is 100%.
Bootstrap support for H3HCF9 as seed ortholog is 100%.

Group of orthologs #1771. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

H3AZ81              	100.00%		H3HD92              	100.00%
H3ANQ2              	52.05%		
H3B8G8              	50.91%		
Bootstrap support for H3AZ81 as seed ortholog is 100%.
Bootstrap support for H3HD92 as seed ortholog is 100%.

Group of orthologs #1772. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

H3BIA3              	100.00%		H3H450              	100.00%
H2ZZS7              	63.99%		
H3B803              	62.91%		
Bootstrap support for H3BIA3 as seed ortholog is 100%.
Bootstrap support for H3H450 as seed ortholog is 100%.

Group of orthologs #1773. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

H3AGB8              	100.00%		H3GEL0              	100.00%
H2ZVX0              	35.45%		
Bootstrap support for H3AGB8 as seed ortholog is 100%.
Bootstrap support for H3GEL0 as seed ortholog is 100%.

Group of orthologs #1774. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

H3B2X4              	100.00%		H3G6F0              	100.00%
Bootstrap support for H3B2X4 as seed ortholog is 100%.
Bootstrap support for H3G6F0 as seed ortholog is 100%.

Group of orthologs #1775. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

H3B1H8              	100.00%		H3GAK9              	100.00%
Bootstrap support for H3B1H8 as seed ortholog is 100%.
Bootstrap support for H3GAK9 as seed ortholog is 100%.

Group of orthologs #1776. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

H3AMX1              	100.00%		H3GU39              	100.00%
Bootstrap support for H3AMX1 as seed ortholog is 100%.
Bootstrap support for H3GU39 as seed ortholog is 100%.

Group of orthologs #1777. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:147

H3BCF9              	100.00%		H3G850              	100.00%
Bootstrap support for H3BCF9 as seed ortholog is 93%.
Bootstrap support for H3G850 as seed ortholog is 100%.

Group of orthologs #1778. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.ramorum:147

H3B7A7              	100.00%		H3GLL0              	100.00%
Bootstrap support for H3B7A7 as seed ortholog is 94%.
Bootstrap support for H3GLL0 as seed ortholog is 100%.

Group of orthologs #1779. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.ramorum:147

M3XIH8              	100.00%		H3GFL4              	100.00%
Bootstrap support for M3XIH8 as seed ortholog is 100%.
Bootstrap support for H3GFL4 as seed ortholog is 100%.

Group of orthologs #1780. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.ramorum:67

H3AY61              	100.00%		H3GYB7              	100.00%
H3AFA3              	37.98%		
Bootstrap support for H3AY61 as seed ortholog is 100%.
Bootstrap support for H3GYB7 as seed ortholog is 87%.

Group of orthologs #1781. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.ramorum:101

H3ABA0              	100.00%		H3G7A8              	100.00%
Bootstrap support for H3ABA0 as seed ortholog is 100%.
Bootstrap support for H3G7A8 as seed ortholog is 100%.

Group of orthologs #1782. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.ramorum:146

H3ASK3              	100.00%		H3GJ95              	100.00%
Bootstrap support for H3ASK3 as seed ortholog is 100%.
Bootstrap support for H3GJ95 as seed ortholog is 100%.

Group of orthologs #1783. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:70

H3ACD7              	100.00%		H3GYX6              	100.00%
Bootstrap support for H3ACD7 as seed ortholog is 98%.
Bootstrap support for H3GYX6 as seed ortholog is 99%.

Group of orthologs #1784. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.ramorum:146

H3B591              	100.00%		H3H037              	100.00%
Bootstrap support for H3B591 as seed ortholog is 100%.
Bootstrap support for H3H037 as seed ortholog is 100%.

Group of orthologs #1785. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.ramorum:145

H3A3L2              	100.00%		H3GLQ3              	100.00%
H3AHE8              	33.00%		
Bootstrap support for H3A3L2 as seed ortholog is 100%.
Bootstrap support for H3GLQ3 as seed ortholog is 100%.

Group of orthologs #1786. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.ramorum:145

H3A3U4              	100.00%		H3G8X4              	100.00%
Bootstrap support for H3A3U4 as seed ortholog is 53%.
Alternative seed ortholog is H3ADN4 (1 bits away from this cluster)
Bootstrap support for H3G8X4 as seed ortholog is 100%.

Group of orthologs #1787. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.ramorum:145

H3ASD7              	100.00%		H3GWJ2              	100.00%
Bootstrap support for H3ASD7 as seed ortholog is 100%.
Bootstrap support for H3GWJ2 as seed ortholog is 100%.

Group of orthologs #1788. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.ramorum:145

H3ALC4              	100.00%		H3H4G5              	100.00%
Bootstrap support for H3ALC4 as seed ortholog is 100%.
Bootstrap support for H3H4G5 as seed ortholog is 100%.

Group of orthologs #1789. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:144

H3B0V4              	100.00%		H3GKG5              	100.00%
H3AZM3              	39.12%		H3GKL9              	32.13%
H3AKP5              	32.44%		H3GKM0              	31.69%
H3BA11              	29.74%		H3GKM2              	25.44%
H3B9B2              	19.29%		H3GWE6              	22.04%
H3AI64              	12.93%		H3HBY4              	20.18%
Bootstrap support for H3B0V4 as seed ortholog is 92%.
Bootstrap support for H3GKG5 as seed ortholog is 100%.

Group of orthologs #1790. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:92

H3AX93              	100.00%		H3G7L6              	100.00%
H3B7H7              	47.00%		
Bootstrap support for H3AX93 as seed ortholog is 100%.
Bootstrap support for H3G7L6 as seed ortholog is 99%.

Group of orthologs #1791. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3AV94              	100.00%		H3GML8              	100.00%
H3AVF2              	35.11%		
Bootstrap support for H3AV94 as seed ortholog is 100%.
Bootstrap support for H3GML8 as seed ortholog is 100%.

Group of orthologs #1792. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3B0C0              	100.00%		H3GBG3              	100.00%
Bootstrap support for H3B0C0 as seed ortholog is 100%.
Bootstrap support for H3GBG3 as seed ortholog is 100%.

Group of orthologs #1793. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3AJ33              	100.00%		H3H396              	100.00%
Bootstrap support for H3AJ33 as seed ortholog is 100%.
Bootstrap support for H3H396 as seed ortholog is 100%.

Group of orthologs #1794. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3BIG3              	100.00%		H3GGW5              	100.00%
Bootstrap support for H3BIG3 as seed ortholog is 100%.
Bootstrap support for H3GGW5 as seed ortholog is 100%.

Group of orthologs #1795. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3B6U6              	100.00%		H3GXF2              	100.00%
Bootstrap support for H3B6U6 as seed ortholog is 100%.
Bootstrap support for H3GXF2 as seed ortholog is 100%.

Group of orthologs #1796. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3BDW3              	100.00%		H3GU37              	100.00%
Bootstrap support for H3BDW3 as seed ortholog is 100%.
Bootstrap support for H3GU37 as seed ortholog is 100%.

Group of orthologs #1797. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

M3XHX2              	100.00%		H3GS40              	100.00%
Bootstrap support for M3XHX2 as seed ortholog is 100%.
Bootstrap support for H3GS40 as seed ortholog is 100%.

Group of orthologs #1798. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.ramorum:144

H3B0W2              	100.00%		H3HAM8              	100.00%
Bootstrap support for H3B0W2 as seed ortholog is 100%.
Bootstrap support for H3HAM8 as seed ortholog is 100%.

Group of orthologs #1799. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.ramorum:63

H2ZXY3              	100.00%		H3GHZ1              	100.00%
H3AL65              	43.40%		H3GCV3              	56.22%
H3AK84              	36.33%		
M3XKG6              	30.02%		
H3AGL5              	17.59%		
Bootstrap support for H2ZXY3 as seed ortholog is 100%.
Bootstrap support for H3GHZ1 as seed ortholog is 96%.

Group of orthologs #1800. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.ramorum:143

H3A836              	100.00%		H3G581              	100.00%
H2ZV61              	55.26%		
Bootstrap support for H3A836 as seed ortholog is 100%.
Bootstrap support for H3G581 as seed ortholog is 100%.

Group of orthologs #1801. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:143

H3A455              	100.00%		H3GAE0              	100.00%
H3AG94              	100.00%		
Bootstrap support for H3A455 as seed ortholog is 99%.
Bootstrap support for H3AG94 as seed ortholog is 100%.
Bootstrap support for H3GAE0 as seed ortholog is 100%.

Group of orthologs #1802. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.ramorum:24

H3B0J0              	100.00%		H3GB43              	100.00%
H3BDK4              	80.68%		
Bootstrap support for H3B0J0 as seed ortholog is 93%.
Bootstrap support for H3GB43 as seed ortholog is 77%.

Group of orthologs #1803. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:86

M3XHQ3              	100.00%		H3G8I0              	100.00%
                    	       		H3G9R0              	99.35%
Bootstrap support for M3XHQ3 as seed ortholog is 99%.
Bootstrap support for H3G8I0 as seed ortholog is 99%.

Group of orthologs #1804. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.ramorum:143

H3AHD2              	100.00%		H3GBW5              	100.00%
Bootstrap support for H3AHD2 as seed ortholog is 100%.
Bootstrap support for H3GBW5 as seed ortholog is 100%.

Group of orthologs #1805. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.ramorum:143

H3B923              	100.00%		H3GGY8              	100.00%
Bootstrap support for H3B923 as seed ortholog is 100%.
Bootstrap support for H3GGY8 as seed ortholog is 100%.

Group of orthologs #1806. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.ramorum:143

H3B0P6              	100.00%		H3GYT5              	100.00%
Bootstrap support for H3B0P6 as seed ortholog is 100%.
Bootstrap support for H3GYT5 as seed ortholog is 100%.

Group of orthologs #1807. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.ramorum:142

H2ZTA7              	100.00%		H3G7Z7              	100.00%
Bootstrap support for H2ZTA7 as seed ortholog is 100%.
Bootstrap support for H3G7Z7 as seed ortholog is 100%.

Group of orthologs #1808. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.ramorum:142

H3ADQ1              	100.00%		H3G7F4              	100.00%
Bootstrap support for H3ADQ1 as seed ortholog is 100%.
Bootstrap support for H3G7F4 as seed ortholog is 100%.

Group of orthologs #1809. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.ramorum:142

H3ASL8              	100.00%		H3G8V1              	100.00%
Bootstrap support for H3ASL8 as seed ortholog is 100%.
Bootstrap support for H3G8V1 as seed ortholog is 100%.

Group of orthologs #1810. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3A0E0              	100.00%		H3G703              	100.00%
H3B4H4              	35.94%		
Bootstrap support for H3A0E0 as seed ortholog is 100%.
Bootstrap support for H3G703 as seed ortholog is 100%.

Group of orthologs #1811. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3AU62              	100.00%		H3G8X9              	100.00%
H3AGC4              	8.00%		
Bootstrap support for H3AU62 as seed ortholog is 100%.
Bootstrap support for H3G8X9 as seed ortholog is 100%.

Group of orthologs #1812. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:141

H3AL06              	100.00%		H3HAS9              	100.00%
H3AR31              	59.59%		
Bootstrap support for H3AL06 as seed ortholog is 45%.
Alternative seed ortholog is H3BCX7 (54 bits away from this cluster)
Bootstrap support for H3HAS9 as seed ortholog is 100%.

Group of orthologs #1813. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3B9P1              	100.00%		H3GXW9              	100.00%
H3BG33              	33.33%		
Bootstrap support for H3B9P1 as seed ortholog is 100%.
Bootstrap support for H3GXW9 as seed ortholog is 100%.

Group of orthologs #1814. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H2ZYI2              	100.00%		H3GAA3              	100.00%
Bootstrap support for H2ZYI2 as seed ortholog is 100%.
Bootstrap support for H3GAA3 as seed ortholog is 100%.

Group of orthologs #1815. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:19

H3ART8              	100.00%		H3G8A5              	100.00%
Bootstrap support for H3ART8 as seed ortholog is 99%.
Bootstrap support for H3G8A5 as seed ortholog is 85%.

Group of orthologs #1816. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3ATE3              	100.00%		H3GH72              	100.00%
Bootstrap support for H3ATE3 as seed ortholog is 100%.
Bootstrap support for H3GH72 as seed ortholog is 100%.

Group of orthologs #1817. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:67

H2ZTJ3              	100.00%		H3HDG5              	100.00%
Bootstrap support for H2ZTJ3 as seed ortholog is 95%.
Bootstrap support for H3HDG5 as seed ortholog is 94%.

Group of orthologs #1818. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3B650              	100.00%		H3GH30              	100.00%
Bootstrap support for H3B650 as seed ortholog is 100%.
Bootstrap support for H3GH30 as seed ortholog is 100%.

Group of orthologs #1819. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:141

H3AWW3              	100.00%		H3HA50              	100.00%
Bootstrap support for H3AWW3 as seed ortholog is 92%.
Bootstrap support for H3HA50 as seed ortholog is 100%.

Group of orthologs #1820. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3BDF2              	100.00%		H3GXT3              	100.00%
Bootstrap support for H3BDF2 as seed ortholog is 100%.
Bootstrap support for H3GXT3 as seed ortholog is 100%.

Group of orthologs #1821. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3BHY5              	100.00%		H3H1F6              	100.00%
Bootstrap support for H3BHY5 as seed ortholog is 100%.
Bootstrap support for H3H1F6 as seed ortholog is 100%.

Group of orthologs #1822. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.ramorum:141

H3BCD0              	100.00%		H3HDZ9              	100.00%
Bootstrap support for H3BCD0 as seed ortholog is 100%.
Bootstrap support for H3HDZ9 as seed ortholog is 100%.

Group of orthologs #1823. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3BCL2              	100.00%		H3GKJ8              	100.00%
H3AUB7              	48.85%		
Bootstrap support for H3BCL2 as seed ortholog is 100%.
Bootstrap support for H3GKJ8 as seed ortholog is 100%.

Group of orthologs #1824. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3AWK1              	100.00%		H3H116              	100.00%
H3AHB5              	63.32%		
Bootstrap support for H3AWK1 as seed ortholog is 100%.
Bootstrap support for H3H116 as seed ortholog is 100%.

Group of orthologs #1825. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3BA89              	100.00%		H3GPT4              	100.00%
                    	       		H3H5Z3              	100.00%
Bootstrap support for H3BA89 as seed ortholog is 100%.
Bootstrap support for H3GPT4 as seed ortholog is 100%.
Bootstrap support for H3H5Z3 as seed ortholog is 100%.

Group of orthologs #1826. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3AVH6              	100.00%		H3G5I3              	100.00%
Bootstrap support for H3AVH6 as seed ortholog is 100%.
Bootstrap support for H3G5I3 as seed ortholog is 100%.

Group of orthologs #1827. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:88

H3AMQ6              	100.00%		H3GCK2              	100.00%
Bootstrap support for H3AMQ6 as seed ortholog is 99%.
Bootstrap support for H3GCK2 as seed ortholog is 99%.

Group of orthologs #1828. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3AA34              	100.00%		H3GPN6              	100.00%
Bootstrap support for H3AA34 as seed ortholog is 100%.
Bootstrap support for H3GPN6 as seed ortholog is 100%.

Group of orthologs #1829. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H2ZU80              	100.00%		H3H516              	100.00%
Bootstrap support for H2ZU80 as seed ortholog is 100%.
Bootstrap support for H3H516 as seed ortholog is 100%.

Group of orthologs #1830. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3AUN7              	100.00%		H3GFI8              	100.00%
Bootstrap support for H3AUN7 as seed ortholog is 100%.
Bootstrap support for H3GFI8 as seed ortholog is 100%.

Group of orthologs #1831. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3B7G8              	100.00%		H3G956              	100.00%
Bootstrap support for H3B7G8 as seed ortholog is 100%.
Bootstrap support for H3G956 as seed ortholog is 100%.

Group of orthologs #1832. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3BCS7              	100.00%		H3GAG5              	100.00%
Bootstrap support for H3BCS7 as seed ortholog is 100%.
Bootstrap support for H3GAG5 as seed ortholog is 100%.

Group of orthologs #1833. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3AVA0              	100.00%		H3GTI2              	100.00%
Bootstrap support for H3AVA0 as seed ortholog is 100%.
Bootstrap support for H3GTI2 as seed ortholog is 100%.

Group of orthologs #1834. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3AZK1              	100.00%		H3GZE1              	100.00%
Bootstrap support for H3AZK1 as seed ortholog is 100%.
Bootstrap support for H3GZE1 as seed ortholog is 100%.

Group of orthologs #1835. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.ramorum:140

H3BC87              	100.00%		H3GVQ2              	100.00%
Bootstrap support for H3BC87 as seed ortholog is 100%.
Bootstrap support for H3GVQ2 as seed ortholog is 100%.

Group of orthologs #1836. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:139

H3AN63              	100.00%		H3HCA8              	100.00%
H3AC91              	42.65%		
H3B2Z5              	6.89%		
Bootstrap support for H3AN63 as seed ortholog is 81%.
Bootstrap support for H3HCA8 as seed ortholog is 100%.

Group of orthologs #1837. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.ramorum:31

H3ALR7              	100.00%		H3GM16              	100.00%
M3XKV3              	26.77%		
Bootstrap support for H3ALR7 as seed ortholog is 70%.
Alternative seed ortholog is H3AZN2 (34 bits away from this cluster)
Bootstrap support for H3GM16 as seed ortholog is 67%.
Alternative seed ortholog is H3GG11 (31 bits away from this cluster)

Group of orthologs #1838. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:35

H3B5D3              	100.00%		H3HE21              	100.00%
H2ZX22              	39.71%		
Bootstrap support for H3B5D3 as seed ortholog is 100%.
Bootstrap support for H3HE21 as seed ortholog is 89%.

Group of orthologs #1839. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:139

H3A449              	100.00%		H3G548              	100.00%
Bootstrap support for H3A449 as seed ortholog is 100%.
Bootstrap support for H3G548 as seed ortholog is 100%.

Group of orthologs #1840. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:139

H2ZRK0              	100.00%		H3GQP5              	100.00%
Bootstrap support for H2ZRK0 as seed ortholog is 100%.
Bootstrap support for H3GQP5 as seed ortholog is 100%.

Group of orthologs #1841. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:139

H2ZUP0              	100.00%		H3GTH1              	100.00%
Bootstrap support for H2ZUP0 as seed ortholog is 100%.
Bootstrap support for H3GTH1 as seed ortholog is 100%.

Group of orthologs #1842. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:139

H3A893              	100.00%		H3GIE9              	100.00%
Bootstrap support for H3A893 as seed ortholog is 100%.
Bootstrap support for H3GIE9 as seed ortholog is 100%.

Group of orthologs #1843. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:139

H3AN30              	100.00%		H3G6A0              	100.00%
Bootstrap support for H3AN30 as seed ortholog is 98%.
Bootstrap support for H3G6A0 as seed ortholog is 100%.

Group of orthologs #1844. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:139

H3AB38              	100.00%		H3GTA2              	100.00%
Bootstrap support for H3AB38 as seed ortholog is 100%.
Bootstrap support for H3GTA2 as seed ortholog is 100%.

Group of orthologs #1845. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:51

H3AY74              	100.00%		H3GHE5              	100.00%
Bootstrap support for H3AY74 as seed ortholog is 97%.
Bootstrap support for H3GHE5 as seed ortholog is 96%.

Group of orthologs #1846. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.ramorum:139

H3AVV6              	100.00%		H3GVL9              	100.00%
Bootstrap support for H3AVV6 as seed ortholog is 100%.
Bootstrap support for H3GVL9 as seed ortholog is 100%.

Group of orthologs #1847. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:139

H3BFP8              	100.00%		H3HAR5              	100.00%
Bootstrap support for H3BFP8 as seed ortholog is 80%.
Bootstrap support for H3HAR5 as seed ortholog is 100%.

Group of orthologs #1848. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:138

H3BBW7              	100.00%		H3GXK6              	100.00%
H3A722              	15.70%		H3GXK7              	100.00%
                    	       		H3GXK5              	13.69%
Bootstrap support for H3BBW7 as seed ortholog is 100%.
Bootstrap support for H3GXK6 as seed ortholog is 100%.
Bootstrap support for H3GXK7 as seed ortholog is 100%.

Group of orthologs #1849. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:138

H3AEP2              	100.00%		H3GU63              	100.00%
H3AMD8              	71.62%		
Bootstrap support for H3AEP2 as seed ortholog is 99%.
Bootstrap support for H3GU63 as seed ortholog is 100%.

Group of orthologs #1850. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:138

H3B3U0              	100.00%		H3GI79              	100.00%
H3B3F2              	21.44%		
Bootstrap support for H3B3U0 as seed ortholog is 73%.
Alternative seed ortholog is H2ZUC7 (29 bits away from this cluster)
Bootstrap support for H3GI79 as seed ortholog is 100%.

Group of orthologs #1851. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:138

H3BAA6              	100.00%		H3GMH6              	100.00%
H3A8E5              	48.63%		
Bootstrap support for H3BAA6 as seed ortholog is 100%.
Bootstrap support for H3GMH6 as seed ortholog is 100%.

Group of orthologs #1852. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:138

H3B5E5              	100.00%		H3GV43              	100.00%
H2ZSM3              	18.16%		
Bootstrap support for H3B5E5 as seed ortholog is 98%.
Bootstrap support for H3GV43 as seed ortholog is 100%.

Group of orthologs #1853. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:138

H2ZYM0              	100.00%		H3G7D9              	100.00%
Bootstrap support for H2ZYM0 as seed ortholog is 100%.
Bootstrap support for H3G7D9 as seed ortholog is 100%.

Group of orthologs #1854. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:138

H3A6Y7              	100.00%		H3G666              	100.00%
Bootstrap support for H3A6Y7 as seed ortholog is 99%.
Bootstrap support for H3G666 as seed ortholog is 100%.

Group of orthologs #1855. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:138

H3ACJ4              	100.00%		H3G8Z5              	100.00%
Bootstrap support for H3ACJ4 as seed ortholog is 100%.
Bootstrap support for H3G8Z5 as seed ortholog is 100%.

Group of orthologs #1856. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:138

H2ZW73              	100.00%		H3GQ94              	100.00%
Bootstrap support for H2ZW73 as seed ortholog is 100%.
Bootstrap support for H3GQ94 as seed ortholog is 100%.

Group of orthologs #1857. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:46

H3AA45              	100.00%		H3GG07              	100.00%
Bootstrap support for H3AA45 as seed ortholog is 92%.
Bootstrap support for H3GG07 as seed ortholog is 88%.

Group of orthologs #1858. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:138

H3AF95              	100.00%		H3GJY0              	100.00%
Bootstrap support for H3AF95 as seed ortholog is 99%.
Bootstrap support for H3GJY0 as seed ortholog is 100%.

Group of orthologs #1859. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:79

H3A8Q8              	100.00%		H3GTS5              	100.00%
Bootstrap support for H3A8Q8 as seed ortholog is 100%.
Bootstrap support for H3GTS5 as seed ortholog is 99%.

Group of orthologs #1860. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:52

H3B1A8              	100.00%		H3G9S2              	100.00%
Bootstrap support for H3B1A8 as seed ortholog is 96%.
Bootstrap support for H3G9S2 as seed ortholog is 98%.

Group of orthologs #1861. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.ramorum:138

H3ABM1              	100.00%		H3HC65              	100.00%
Bootstrap support for H3ABM1 as seed ortholog is 100%.
Bootstrap support for H3HC65 as seed ortholog is 100%.

Group of orthologs #1862. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:44

H2ZUW2              	100.00%		H3GCJ5              	100.00%
H3ASI0              	57.55%		
H3AY19              	55.53%		
Bootstrap support for H2ZUW2 as seed ortholog is 94%.
Bootstrap support for H3GCJ5 as seed ortholog is 85%.

Group of orthologs #1863. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:44

H2ZYY0              	100.00%		H3GAC5              	100.00%
                    	       		H3GAX3              	98.83%
                    	       		H3GZL7              	95.91%
Bootstrap support for H2ZYY0 as seed ortholog is 99%.
Bootstrap support for H3GAC5 as seed ortholog is 87%.

Group of orthologs #1864. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.ramorum:137

H3AU25              	100.00%		H3HD62              	100.00%
                    	       		H3G5A3              	91.53%
Bootstrap support for H3AU25 as seed ortholog is 100%.
Bootstrap support for H3HD62 as seed ortholog is 100%.

Group of orthologs #1865. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.ramorum:47

H2ZSW2              	100.00%		H3G8W7              	100.00%
Bootstrap support for H2ZSW2 as seed ortholog is 66%.
Alternative seed ortholog is H3B355 (13 bits away from this cluster)
Bootstrap support for H3G8W7 as seed ortholog is 94%.

Group of orthologs #1866. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.ramorum:137

H3AII8              	100.00%		H3GWG7              	100.00%
Bootstrap support for H3AII8 as seed ortholog is 100%.
Bootstrap support for H3GWG7 as seed ortholog is 100%.

Group of orthologs #1867. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.ramorum:137

H3AWA1              	100.00%		H3GLU2              	100.00%
Bootstrap support for H3AWA1 as seed ortholog is 100%.
Bootstrap support for H3GLU2 as seed ortholog is 100%.

Group of orthologs #1868. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.ramorum:137

H3ALE2              	100.00%		H3H0P3              	100.00%
Bootstrap support for H3ALE2 as seed ortholog is 100%.
Bootstrap support for H3H0P3 as seed ortholog is 100%.

Group of orthologs #1869. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.ramorum:136

H3AX81              	100.00%		H3H020              	100.00%
H2ZY49              	48.59%		
H3BDS5              	38.97%		
Bootstrap support for H3AX81 as seed ortholog is 90%.
Bootstrap support for H3H020 as seed ortholog is 100%.

Group of orthologs #1870. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.ramorum:46

H3AED0              	100.00%		H3GI62              	100.00%
Bootstrap support for H3AED0 as seed ortholog is 100%.
Bootstrap support for H3GI62 as seed ortholog is 85%.

Group of orthologs #1871. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.ramorum:136

H2ZUZ2              	100.00%		H3H0F6              	100.00%
Bootstrap support for H2ZUZ2 as seed ortholog is 100%.
Bootstrap support for H3H0F6 as seed ortholog is 100%.

Group of orthologs #1872. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:51

H2ZWB2              	100.00%		H3GZV7              	100.00%
Bootstrap support for H2ZWB2 as seed ortholog is 96%.
Bootstrap support for H3GZV7 as seed ortholog is 86%.

Group of orthologs #1873. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:60

H3A6J5              	100.00%		H3GRX0              	100.00%
Bootstrap support for H3A6J5 as seed ortholog is 85%.
Bootstrap support for H3GRX0 as seed ortholog is 95%.

Group of orthologs #1874. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.ramorum:136

H3B5C4              	100.00%		H3G5B7              	100.00%
Bootstrap support for H3B5C4 as seed ortholog is 100%.
Bootstrap support for H3G5B7 as seed ortholog is 100%.

Group of orthologs #1875. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:13

H3AWQ3              	100.00%		H3GKQ4              	100.00%
Bootstrap support for H3AWQ3 as seed ortholog is 87%.
Bootstrap support for H3GKQ4 as seed ortholog is 63%.
Alternative seed ortholog is H3GP65 (13 bits away from this cluster)

Group of orthologs #1876. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:136

H3AJP1              	100.00%		H3HE46              	100.00%
Bootstrap support for H3AJP1 as seed ortholog is 80%.
Bootstrap support for H3HE46 as seed ortholog is 100%.

Group of orthologs #1877. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.ramorum:136

H3BAJ8              	100.00%		H3GS83              	100.00%
Bootstrap support for H3BAJ8 as seed ortholog is 100%.
Bootstrap support for H3GS83 as seed ortholog is 100%.

Group of orthologs #1878. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:46

H3B1U2              	100.00%		H3GS49              	100.00%
H3A9W6              	20.70%		H3GS50              	62.89%
H3A4P4              	5.96%		H3GHR9              	41.47%
Bootstrap support for H3B1U2 as seed ortholog is 86%.
Bootstrap support for H3GS49 as seed ortholog is 80%.

Group of orthologs #1879. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H2ZXS0              	100.00%		H3GMV3              	100.00%
H3AZN1              	68.98%		
H3AG23              	17.75%		
H3ABC3              	9.57%		
Bootstrap support for H2ZXS0 as seed ortholog is 100%.
Bootstrap support for H3GMV3 as seed ortholog is 100%.

Group of orthologs #1880. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3B0C9              	100.00%		H3G9H4              	100.00%
H3AP15              	35.06%		H3G8R1              	40.96%
H3AE73              	27.59%		
Bootstrap support for H3B0C9 as seed ortholog is 100%.
Bootstrap support for H3G9H4 as seed ortholog is 100%.

Group of orthologs #1881. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3AH26              	100.00%		H3G5Z9              	100.00%
H3AXL2              	80.43%		
Bootstrap support for H3AH26 as seed ortholog is 100%.
Bootstrap support for H3G5Z9 as seed ortholog is 100%.

Group of orthologs #1882. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:135

H3AFV8              	100.00%		H3G7E0              	100.00%
H3AXL3              	44.27%		
Bootstrap support for H3AFV8 as seed ortholog is 98%.
Bootstrap support for H3G7E0 as seed ortholog is 100%.

Group of orthologs #1883. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3AXL1              	100.00%		H3H6C7              	100.00%
                    	       		H3GRA5              	99.70%
Bootstrap support for H3AXL1 as seed ortholog is 100%.
Bootstrap support for H3H6C7 as seed ortholog is 100%.

Group of orthologs #1884. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3AEZ0              	100.00%		H3GDZ4              	100.00%
Bootstrap support for H3AEZ0 as seed ortholog is 100%.
Bootstrap support for H3GDZ4 as seed ortholog is 100%.

Group of orthologs #1885. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3AQK3              	100.00%		H3GKB4              	100.00%
Bootstrap support for H3AQK3 as seed ortholog is 100%.
Bootstrap support for H3GKB4 as seed ortholog is 100%.

Group of orthologs #1886. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3A9W2              	100.00%		H3H1C0              	100.00%
Bootstrap support for H3A9W2 as seed ortholog is 100%.
Bootstrap support for H3H1C0 as seed ortholog is 100%.

Group of orthologs #1887. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3B186              	100.00%		H3GK34              	100.00%
Bootstrap support for H3B186 as seed ortholog is 100%.
Bootstrap support for H3GK34 as seed ortholog is 100%.

Group of orthologs #1888. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:135

H3B4X7              	100.00%		H3GHD5              	100.00%
Bootstrap support for H3B4X7 as seed ortholog is 100%.
Bootstrap support for H3GHD5 as seed ortholog is 100%.

Group of orthologs #1889. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:135

H3B7I8              	100.00%		H3GI66              	100.00%
Bootstrap support for H3B7I8 as seed ortholog is 98%.
Bootstrap support for H3GI66 as seed ortholog is 100%.

Group of orthologs #1890. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.ramorum:88

H3BB80              	100.00%		H3GP91              	100.00%
Bootstrap support for H3BB80 as seed ortholog is 100%.
Bootstrap support for H3GP91 as seed ortholog is 99%.

Group of orthologs #1891. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H3A9C1              	100.00%		H3GC74              	100.00%
H3ADF4              	100.00%		H3GJH8              	100.00%
H3AKZ6              	100.00%		
H3A9F6              	73.35%		
H3BGW3              	63.30%		
H3B0E1              	63.19%		
H3BAR9              	62.35%		
H3BC47              	58.28%		
M3XLP7              	51.65%		
H3AB30              	43.42%		
H3B534              	43.27%		
H3B452              	42.40%		
H3BBD9              	34.50%		
H3A056              	29.82%		
H3B180              	25.82%		
H3BB39              	24.85%		
H3B1J1              	22.94%		
H2ZYX1              	20.33%		
H3A398              	19.33%		
H2ZVU9              	5.99%		
Bootstrap support for H3A9C1 as seed ortholog is 100%.
Bootstrap support for H3ADF4 as seed ortholog is 100%.
Bootstrap support for H3AKZ6 as seed ortholog is 100%.
Bootstrap support for H3GC74 as seed ortholog is 100%.
Bootstrap support for H3GJH8 as seed ortholog is 100%.

Group of orthologs #1892. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:2

H3B9Z3              	100.00%		H3G554              	100.00%
H3ABM2              	36.16%		H3G6K9              	100.00%
                    	       		H3G7K7              	97.37%
                    	       		H3G739              	91.61%
                    	       		H3G5E8              	90.32%
                    	       		H3G6R4              	88.60%
                    	       		H3G8H5              	66.67%
                    	       		H3GAZ5              	66.67%
                    	       		H3G6Y4              	50.00%
                    	       		H3G5E5              	40.35%
Bootstrap support for H3B9Z3 as seed ortholog is 76%.
Bootstrap support for H3G554 as seed ortholog is 49%.
Alternative seed ortholog is H3GAE4 (2 bits away from this cluster)
Bootstrap support for H3G6K9 as seed ortholog is 53%.
Alternative seed ortholog is H3GAE4 (2 bits away from this cluster)

Group of orthologs #1893. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:56

H3A4F7              	100.00%		H3HDG7              	100.00%
H3APW8              	10.02%		
Bootstrap support for H3A4F7 as seed ortholog is 97%.
Bootstrap support for H3HDG7 as seed ortholog is 94%.

Group of orthologs #1894. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H2ZUI6              	100.00%		H3G531              	100.00%
Bootstrap support for H2ZUI6 as seed ortholog is 100%.
Bootstrap support for H3G531 as seed ortholog is 100%.

Group of orthologs #1895. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H3A569              	100.00%		H3GTA3              	100.00%
Bootstrap support for H3A569 as seed ortholog is 100%.
Bootstrap support for H3GTA3 as seed ortholog is 100%.

Group of orthologs #1896. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H3B7F4              	100.00%		H3G8P4              	100.00%
Bootstrap support for H3B7F4 as seed ortholog is 100%.
Bootstrap support for H3G8P4 as seed ortholog is 100%.

Group of orthologs #1897. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H3AB96              	100.00%		H3H1R4              	100.00%
Bootstrap support for H3AB96 as seed ortholog is 100%.
Bootstrap support for H3H1R4 as seed ortholog is 100%.

Group of orthologs #1898. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H3B7V5              	100.00%		H3GG35              	100.00%
Bootstrap support for H3B7V5 as seed ortholog is 100%.
Bootstrap support for H3GG35 as seed ortholog is 100%.

Group of orthologs #1899. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.ramorum:134

H3B886              	100.00%		H3GZL1              	100.00%
Bootstrap support for H3B886 as seed ortholog is 100%.
Bootstrap support for H3GZL1 as seed ortholog is 100%.

Group of orthologs #1900. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.ramorum:133

H3A2B9              	100.00%		H3GK27              	100.00%
H3B1Y4              	100.00%		H3GWR4              	100.00%
H2ZYU3              	54.82%		H3GWR5              	83.22%
H2ZYB2              	34.60%		H3GK28              	59.45%
H3ACU3              	21.56%		
H3AAE2              	10.90%		
Bootstrap support for H3A2B9 as seed ortholog is 100%.
Bootstrap support for H3B1Y4 as seed ortholog is 100%.
Bootstrap support for H3GK27 as seed ortholog is 100%.
Bootstrap support for H3GWR4 as seed ortholog is 100%.

Group of orthologs #1901. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.ramorum:133

H2ZU62              	100.00%		H3G9J2              	100.00%
H2ZS17              	10.22%		H3HEG2              	20.66%
Bootstrap support for H2ZU62 as seed ortholog is 100%.
Bootstrap support for H3G9J2 as seed ortholog is 100%.

Group of orthologs #1902. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.ramorum:133

H3B4K7              	100.00%		H3GAK0              	100.00%
H3B382              	23.09%		
H3BID9              	12.92%		
Bootstrap support for H3B4K7 as seed ortholog is 100%.
Bootstrap support for H3GAK0 as seed ortholog is 100%.

Group of orthologs #1903. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:133

H3AKK7              	100.00%		H3GIG5              	100.00%
H2ZXZ2              	19.16%		
Bootstrap support for H3AKK7 as seed ortholog is 99%.
Bootstrap support for H3GIG5 as seed ortholog is 100%.

Group of orthologs #1904. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.ramorum:133

H2ZXJ0              	100.00%		H3G8J4              	100.00%
Bootstrap support for H2ZXJ0 as seed ortholog is 100%.
Bootstrap support for H3G8J4 as seed ortholog is 100%.

Group of orthologs #1905. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:133

H3B131              	100.00%		H3G9J7              	100.00%
Bootstrap support for H3B131 as seed ortholog is 97%.
Bootstrap support for H3G9J7 as seed ortholog is 100%.

Group of orthologs #1906. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.ramorum:133

H3B577              	100.00%		H3HBL2              	100.00%
Bootstrap support for H3B577 as seed ortholog is 100%.
Bootstrap support for H3HBL2 as seed ortholog is 100%.

Group of orthologs #1907. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:132

H3A0E3              	100.00%		H3GQF1              	100.00%
H3AQ36              	48.41%		
Bootstrap support for H3A0E3 as seed ortholog is 100%.
Bootstrap support for H3GQF1 as seed ortholog is 100%.

Group of orthologs #1908. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:64

H2ZWR2              	100.00%		H3GL70              	100.00%
Bootstrap support for H2ZWR2 as seed ortholog is 100%.
Bootstrap support for H3GL70 as seed ortholog is 94%.

Group of orthologs #1909. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:83

H3B334              	100.00%		H3G9L3              	100.00%
Bootstrap support for H3B334 as seed ortholog is 99%.
Bootstrap support for H3G9L3 as seed ortholog is 99%.

Group of orthologs #1910. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:132

H3B418              	100.00%		H3G9I1              	100.00%
Bootstrap support for H3B418 as seed ortholog is 100%.
Bootstrap support for H3G9I1 as seed ortholog is 100%.

Group of orthologs #1911. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:16

H3AUF1              	100.00%		H3GSP0              	100.00%
Bootstrap support for H3AUF1 as seed ortholog is 100%.
Bootstrap support for H3GSP0 as seed ortholog is 64%.
Alternative seed ortholog is H3GUW1 (16 bits away from this cluster)

Group of orthologs #1912. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.ramorum:132

H3A8A6              	100.00%		H3HBS4              	100.00%
Bootstrap support for H3A8A6 as seed ortholog is 100%.
Bootstrap support for H3HBS4 as seed ortholog is 100%.

Group of orthologs #1913. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:132

H3AUJ2              	100.00%		H3GY40              	100.00%
Bootstrap support for H3AUJ2 as seed ortholog is 56%.
Alternative seed ortholog is H3B7T6 (12 bits away from this cluster)
Bootstrap support for H3GY40 as seed ortholog is 100%.

Group of orthologs #1914. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:79

H3BEJ8              	100.00%		H3G8Z6              	100.00%
H3AZS8              	18.58%		
Bootstrap support for H3BEJ8 as seed ortholog is 99%.
Bootstrap support for H3G8Z6 as seed ortholog is 99%.

Group of orthologs #1915. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:131

H3AQB5              	100.00%		H3H1C1              	100.00%
H3AAI2              	21.29%		
Bootstrap support for H3AQB5 as seed ortholog is 100%.
Bootstrap support for H3H1C1 as seed ortholog is 100%.

Group of orthologs #1916. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:131

H3A4M9              	100.00%		H3G9D5              	100.00%
Bootstrap support for H3A4M9 as seed ortholog is 100%.
Bootstrap support for H3G9D5 as seed ortholog is 100%.

Group of orthologs #1917. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:131

H3AMH8              	100.00%		H3G562              	100.00%
Bootstrap support for H3AMH8 as seed ortholog is 100%.
Bootstrap support for H3G562 as seed ortholog is 100%.

Group of orthologs #1918. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:131

H3A1B2              	100.00%		H3GXC2              	100.00%
Bootstrap support for H3A1B2 as seed ortholog is 100%.
Bootstrap support for H3GXC2 as seed ortholog is 100%.

Group of orthologs #1919. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:131

H3BDZ6              	100.00%		H3G9J1              	100.00%
Bootstrap support for H3BDZ6 as seed ortholog is 100%.
Bootstrap support for H3G9J1 as seed ortholog is 100%.

Group of orthologs #1920. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:47

H3BEP6              	100.00%		H3G991              	100.00%
Bootstrap support for H3BEP6 as seed ortholog is 100%.
Bootstrap support for H3G991 as seed ortholog is 98%.

Group of orthologs #1921. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.ramorum:131

H3AXG4              	100.00%		H3GR80              	100.00%
Bootstrap support for H3AXG4 as seed ortholog is 100%.
Bootstrap support for H3GR80 as seed ortholog is 100%.

Group of orthologs #1922. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:130

H2ZV34              	100.00%		H3GS02              	100.00%
H3ACY1              	41.05%		
H2ZUV0              	19.06%		
H3BG10              	16.47%		
H3A395              	14.05%		
H2ZXK7              	11.62%		
H3AP61              	11.45%		
H3ASA4              	9.53%		
H3B8J1              	9.20%		
Bootstrap support for H2ZV34 as seed ortholog is 100%.
Bootstrap support for H3GS02 as seed ortholog is 100%.

Group of orthologs #1923. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:130

H3AUM1              	100.00%		H3G9A7              	100.00%
H3A6P7              	33.73%		H3GAY7              	95.16%
H3A3S6              	33.10%		H3G8Q5              	71.03%
Bootstrap support for H3AUM1 as seed ortholog is 100%.
Bootstrap support for H3G9A7 as seed ortholog is 100%.

Group of orthologs #1924. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:130

M3XK92              	100.00%		H3GQ33              	100.00%
M3XK49              	68.69%		
Bootstrap support for M3XK92 as seed ortholog is 100%.
Bootstrap support for H3GQ33 as seed ortholog is 100%.

Group of orthologs #1925. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:130

H3A8K4              	100.00%		H3H367              	100.00%
Bootstrap support for H3A8K4 as seed ortholog is 100%.
Bootstrap support for H3H367 as seed ortholog is 100%.

Group of orthologs #1926. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.ramorum:130

H3B4K2              	100.00%		H3GNF0              	100.00%
Bootstrap support for H3B4K2 as seed ortholog is 100%.
Bootstrap support for H3GNF0 as seed ortholog is 100%.

Group of orthologs #1927. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.ramorum:38

H3AY24              	100.00%		H3GVC7              	100.00%
H3B9Z2              	68.20%		H3GVC6              	38.03%
H3BBF2              	64.31%		H3H2F4              	17.60%
H3ACF3              	61.86%		H3GGD5              	14.75%
H3AYU0              	47.55%		H3GI50              	14.43%
H3A9Z1              	46.32%		H3H2G0              	14.10%
H3A142              	46.22%		H3GLZ9              	13.77%
H2ZS73              	34.87%		H3HD37              	12.13%
H3A4N4              	25.97%		H3GIC4              	11.91%
H2ZYD7              	19.12%		H3HAH9              	10.05%
H3A744              	15.64%		H3GFJ0              	10.05%
H3AGI0              	15.44%		H3H2F0              	7.76%
H3AYZ1              	12.47%		
H3AG62              	10.94%		
H2ZZG8              	10.84%		
H3ATL1              	7.87%		
H3B6P5              	7.26%		
Bootstrap support for H3AY24 as seed ortholog is 81%.
Bootstrap support for H3GVC7 as seed ortholog is 79%.

Group of orthologs #1928. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H3AMW2              	100.00%		H3G9A2              	100.00%
H3BFI8              	81.42%		
H3AC31              	9.29%		
Bootstrap support for H3AMW2 as seed ortholog is 100%.
Bootstrap support for H3G9A2 as seed ortholog is 100%.

Group of orthologs #1929. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H3ANE2              	100.00%		H3GTV7              	100.00%
                    	       		H3GQ48              	7.89%
Bootstrap support for H3ANE2 as seed ortholog is 100%.
Bootstrap support for H3GTV7 as seed ortholog is 100%.

Group of orthologs #1930. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H3BII2              	100.00%		H3GGJ0              	100.00%
H3BG63              	42.17%		
Bootstrap support for H3BII2 as seed ortholog is 100%.
Bootstrap support for H3GGJ0 as seed ortholog is 100%.

Group of orthologs #1931. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:57

H2ZXT4              	100.00%		H3G5H0              	100.00%
Bootstrap support for H2ZXT4 as seed ortholog is 79%.
Bootstrap support for H3G5H0 as seed ortholog is 99%.

Group of orthologs #1932. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H2ZXC1              	100.00%		H3GEQ8              	100.00%
Bootstrap support for H2ZXC1 as seed ortholog is 100%.
Bootstrap support for H3GEQ8 as seed ortholog is 100%.

Group of orthologs #1933. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H2ZUS9              	100.00%		H3GMH5              	100.00%
Bootstrap support for H2ZUS9 as seed ortholog is 100%.
Bootstrap support for H3GMH5 as seed ortholog is 100%.

Group of orthologs #1934. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H2ZTX4              	100.00%		H3H1L9              	100.00%
Bootstrap support for H2ZTX4 as seed ortholog is 100%.
Bootstrap support for H3H1L9 as seed ortholog is 100%.

Group of orthologs #1935. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H3AQ13              	100.00%		H3GSL7              	100.00%
Bootstrap support for H3AQ13 as seed ortholog is 100%.
Bootstrap support for H3GSL7 as seed ortholog is 100%.

Group of orthologs #1936. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.ramorum:129

H3BCR1              	100.00%		H3HB50              	100.00%
Bootstrap support for H3BCR1 as seed ortholog is 100%.
Bootstrap support for H3HB50 as seed ortholog is 100%.

Group of orthologs #1937. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H3ASE8              	100.00%		H3GK24              	100.00%
H3B9I6              	55.61%		
H3B935              	42.52%		
Bootstrap support for H3ASE8 as seed ortholog is 100%.
Bootstrap support for H3GK24 as seed ortholog is 100%.

Group of orthologs #1938. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:53

H3AUM2              	100.00%		H3G796              	100.00%
H3BEG2              	68.43%		
Bootstrap support for H3AUM2 as seed ortholog is 84%.
Bootstrap support for H3G796 as seed ortholog is 95%.

Group of orthologs #1939. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:76

H3AKF6              	100.00%		H3GGW6              	100.00%
H3B324              	23.16%		
Bootstrap support for H3AKF6 as seed ortholog is 100%.
Bootstrap support for H3GGW6 as seed ortholog is 99%.

Group of orthologs #1940. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.ramorum:128

H3ABM0              	100.00%		H3GTM4              	100.00%
H3AQ09              	45.30%		
Bootstrap support for H3ABM0 as seed ortholog is 86%.
Bootstrap support for H3GTM4 as seed ortholog is 100%.

Group of orthologs #1941. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:128

M3XK98              	100.00%		H3GXF1              	100.00%
                    	       		H3GRM9              	6.27%
Bootstrap support for M3XK98 as seed ortholog is 87%.
Bootstrap support for H3GXF1 as seed ortholog is 100%.

Group of orthologs #1942. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H2ZRW8              	100.00%		H3G918              	100.00%
Bootstrap support for H2ZRW8 as seed ortholog is 100%.
Bootstrap support for H3G918 as seed ortholog is 100%.

Group of orthologs #1943. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H2ZSU7              	100.00%		H3GFQ4              	100.00%
Bootstrap support for H2ZSU7 as seed ortholog is 100%.
Bootstrap support for H3GFQ4 as seed ortholog is 100%.

Group of orthologs #1944. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H3A2M2              	100.00%		H3G8N4              	100.00%
Bootstrap support for H3A2M2 as seed ortholog is 100%.
Bootstrap support for H3G8N4 as seed ortholog is 100%.

Group of orthologs #1945. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:67

H2ZX33              	100.00%		H3GE52              	100.00%
Bootstrap support for H2ZX33 as seed ortholog is 95%.
Bootstrap support for H3GE52 as seed ortholog is 97%.

Group of orthologs #1946. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H3A3D8              	100.00%		H3GFM8              	100.00%
Bootstrap support for H3A3D8 as seed ortholog is 100%.
Bootstrap support for H3GFM8 as seed ortholog is 100%.

Group of orthologs #1947. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:63

H3A8M9              	100.00%		H3GI81              	100.00%
Bootstrap support for H3A8M9 as seed ortholog is 100%.
Bootstrap support for H3GI81 as seed ortholog is 98%.

Group of orthologs #1948. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:74

H2ZTC7              	100.00%		H3H1D5              	100.00%
Bootstrap support for H2ZTC7 as seed ortholog is 100%.
Bootstrap support for H3H1D5 as seed ortholog is 99%.

Group of orthologs #1949. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H2ZXI0              	100.00%		H3HBE5              	100.00%
Bootstrap support for H2ZXI0 as seed ortholog is 100%.
Bootstrap support for H3HBE5 as seed ortholog is 100%.

Group of orthologs #1950. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:128

H3AM51              	100.00%		H3GU61              	100.00%
Bootstrap support for H3AM51 as seed ortholog is 97%.
Bootstrap support for H3GU61 as seed ortholog is 100%.

Group of orthologs #1951. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:62

H3ACC7              	100.00%		H3H7K8              	100.00%
Bootstrap support for H3ACC7 as seed ortholog is 94%.
Bootstrap support for H3H7K8 as seed ortholog is 96%.

Group of orthologs #1952. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H3BAM4              	100.00%		H3GEW3              	100.00%
Bootstrap support for H3BAM4 as seed ortholog is 100%.
Bootstrap support for H3GEW3 as seed ortholog is 100%.

Group of orthologs #1953. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.ramorum:128

H3BGT9              	100.00%		H3HAR3              	100.00%
Bootstrap support for H3BGT9 as seed ortholog is 100%.
Bootstrap support for H3HAR3 as seed ortholog is 100%.

Group of orthologs #1954. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:57

H3BG83              	100.00%		H3GWH4              	100.00%
H3BG42              	25.18%		H3H0D0              	28.31%
H3B697              	19.13%		H3H0D4              	28.08%
H3A791              	15.74%		H3GAF6              	24.20%
H2ZYH5              	9.44%		H3GAF5              	24.20%
H3AJM6              	9.44%		H3H1Y5              	23.06%
H3A3H4              	8.23%		H3H0D1              	21.92%
H3B6B5              	7.26%		H3GLZ1              	19.41%
H3AJ32              	5.81%		H3GB54              	15.07%
H3AAB9              	5.81%		H3H6S1              	14.38%
                    	       		H3HC53              	10.27%
                    	       		H3H1Y1              	7.53%
                    	       		H3H0C9              	6.39%
Bootstrap support for H3BG83 as seed ortholog is 95%.
Bootstrap support for H3GWH4 as seed ortholog is 95%.

Group of orthologs #1955. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:80

H3B4I9              	100.00%		H3GR24              	100.00%
                    	       		H3GHL5              	76.12%
                    	       		H3GHL6              	57.36%
                    	       		H3GHL4              	51.78%
                    	       		H3H3A1              	22.79%
Bootstrap support for H3B4I9 as seed ortholog is 100%.
Bootstrap support for H3GR24 as seed ortholog is 93%.

Group of orthologs #1956. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:127

H3AJN6              	100.00%		H3GQX1              	100.00%
                    	       		H3GQX3              	70.66%
                    	       		H3GQW4              	48.65%
                    	       		H3GQW3              	37.32%
Bootstrap support for H3AJN6 as seed ortholog is 100%.
Bootstrap support for H3GQX1 as seed ortholog is 100%.

Group of orthologs #1957. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:127

H3A6G0              	100.00%		H3H4G3              	100.00%
H3A8N3              	65.45%		
H3AHT6              	49.83%		
Bootstrap support for H3A6G0 as seed ortholog is 100%.
Bootstrap support for H3H4G3 as seed ortholog is 100%.

Group of orthologs #1958. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:127

H3A970              	100.00%		H3GXQ9              	100.00%
Bootstrap support for H3A970 as seed ortholog is 100%.
Bootstrap support for H3GXQ9 as seed ortholog is 100%.

Group of orthologs #1959. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:127

H3ADZ8              	100.00%		H3HC47              	100.00%
Bootstrap support for H3ADZ8 as seed ortholog is 100%.
Bootstrap support for H3HC47 as seed ortholog is 100%.

Group of orthologs #1960. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:127

H3AMD3              	100.00%		H3HCF2              	100.00%
Bootstrap support for H3AMD3 as seed ortholog is 100%.
Bootstrap support for H3HCF2 as seed ortholog is 100%.

Group of orthologs #1961. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.ramorum:127

M3XHM0              	100.00%		H3H1L6              	100.00%
Bootstrap support for M3XHM0 as seed ortholog is 100%.
Bootstrap support for H3H1L6 as seed ortholog is 100%.

Group of orthologs #1962. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.ramorum:126

H3B7K5              	100.00%		H3GGY6              	100.00%
                    	       		H3GGY5              	56.87%
                    	       		H3GKY4              	30.92%
                    	       		H3GRJ9              	27.10%
                    	       		H3GRK0              	26.53%
                    	       		H3GRJ4              	25.00%
                    	       		H3GMY9              	22.90%
                    	       		H3H0D6              	7.54%
Bootstrap support for H3B7K5 as seed ortholog is 63%.
Alternative seed ortholog is H3BF84 (14 bits away from this cluster)
Bootstrap support for H3GGY6 as seed ortholog is 100%.

Group of orthologs #1963. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:126

H3BBD3              	100.00%		H3GWY0              	100.00%
H3A5L1              	40.01%		
Bootstrap support for H3BBD3 as seed ortholog is 100%.
Bootstrap support for H3GWY0 as seed ortholog is 100%.

Group of orthologs #1964. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:126

H3B5N5              	100.00%		H3HDW6              	100.00%
H3ASG0              	58.54%		
Bootstrap support for H3B5N5 as seed ortholog is 100%.
Bootstrap support for H3HDW6 as seed ortholog is 100%.

Group of orthologs #1965. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:126

H3AVG4              	100.00%		H3GGR7              	100.00%
Bootstrap support for H3AVG4 as seed ortholog is 100%.
Bootstrap support for H3GGR7 as seed ortholog is 100%.

Group of orthologs #1966. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:126

H3A9L9              	100.00%		H3GZT3              	100.00%
Bootstrap support for H3A9L9 as seed ortholog is 100%.
Bootstrap support for H3GZT3 as seed ortholog is 100%.

Group of orthologs #1967. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:126

H3B3C7              	100.00%		H3GR70              	100.00%
Bootstrap support for H3B3C7 as seed ortholog is 100%.
Bootstrap support for H3GR70 as seed ortholog is 100%.

Group of orthologs #1968. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.ramorum:126

H3B5N4              	100.00%		H3GSK1              	100.00%
Bootstrap support for H3B5N4 as seed ortholog is 100%.
Bootstrap support for H3GSK1 as seed ortholog is 100%.

Group of orthologs #1969. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:55

H3BH95              	100.00%		H3GMD6              	100.00%
Bootstrap support for H3BH95 as seed ortholog is 98%.
Bootstrap support for H3GMD6 as seed ortholog is 98%.

Group of orthologs #1970. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.ramorum:56

H3AM67              	100.00%		H3HCT5              	100.00%
                    	       		H3HC41              	7.83%
Bootstrap support for H3AM67 as seed ortholog is 71%.
Alternative seed ortholog is H3A3A3 (26 bits away from this cluster)
Bootstrap support for H3HCT5 as seed ortholog is 90%.

Group of orthologs #1971. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.ramorum:125

H3AS23              	100.00%		H3HBA4              	100.00%
H3BA85              	50.55%		
Bootstrap support for H3AS23 as seed ortholog is 87%.
Bootstrap support for H3HBA4 as seed ortholog is 100%.

Group of orthologs #1972. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H3A607              	100.00%		H3GRX3              	100.00%
Bootstrap support for H3A607 as seed ortholog is 100%.
Bootstrap support for H3GRX3 as seed ortholog is 100%.

Group of orthologs #1973. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:1

H3ACH9              	100.00%		H3GLX3              	100.00%
Bootstrap support for H3ACH9 as seed ortholog is 100%.
Bootstrap support for H3GLX3 as seed ortholog is 52%.
Alternative seed ortholog is H3GDW1 (1 bits away from this cluster)

Group of orthologs #1974. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H2ZWU6              	100.00%		H3HBM7              	100.00%
Bootstrap support for H2ZWU6 as seed ortholog is 100%.
Bootstrap support for H3HBM7 as seed ortholog is 100%.

Group of orthologs #1975. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H3ALQ0              	100.00%		H3GSX0              	100.00%
Bootstrap support for H3ALQ0 as seed ortholog is 100%.
Bootstrap support for H3GSX0 as seed ortholog is 100%.

Group of orthologs #1976. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H3AW82              	100.00%		H3GKM6              	100.00%
Bootstrap support for H3AW82 as seed ortholog is 100%.
Bootstrap support for H3GKM6 as seed ortholog is 100%.

Group of orthologs #1977. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.ramorum:19

H3B5J4              	100.00%		H3GIV4              	100.00%
Bootstrap support for H3B5J4 as seed ortholog is 69%.
Alternative seed ortholog is H3BG62 (6 bits away from this cluster)
Bootstrap support for H3GIV4 as seed ortholog is 66%.
Alternative seed ortholog is H3GZL9 (19 bits away from this cluster)

Group of orthologs #1978. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H3B1S7              	100.00%		H3GMP6              	100.00%
Bootstrap support for H3B1S7 as seed ortholog is 100%.
Bootstrap support for H3GMP6 as seed ortholog is 100%.

Group of orthologs #1979. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H3BCV8              	100.00%		H3GGZ9              	100.00%
Bootstrap support for H3BCV8 as seed ortholog is 100%.
Bootstrap support for H3GGZ9 as seed ortholog is 100%.

Group of orthologs #1980. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.ramorum:125

H3AIE1              	100.00%		H3HCX7              	100.00%
Bootstrap support for H3AIE1 as seed ortholog is 100%.
Bootstrap support for H3HCX7 as seed ortholog is 100%.

Group of orthologs #1981. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3AW39              	100.00%		H3G6U4              	100.00%
                    	       		H3G7T5              	100.00%
Bootstrap support for H3AW39 as seed ortholog is 100%.
Bootstrap support for H3G6U4 as seed ortholog is 100%.
Bootstrap support for H3G7T5 as seed ortholog is 100%.

Group of orthologs #1982. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H2ZZC6              	100.00%		H3G535              	100.00%
Bootstrap support for H2ZZC6 as seed ortholog is 100%.
Bootstrap support for H3G535 as seed ortholog is 100%.

Group of orthologs #1983. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3A2N8              	100.00%		H3G9H2              	100.00%
Bootstrap support for H3A2N8 as seed ortholog is 100%.
Bootstrap support for H3G9H2 as seed ortholog is 100%.

Group of orthologs #1984. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H2ZXG7              	100.00%		H3GS58              	100.00%
Bootstrap support for H2ZXG7 as seed ortholog is 100%.
Bootstrap support for H3GS58 as seed ortholog is 100%.

Group of orthologs #1985. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3B267              	100.00%		H3G6S7              	100.00%
Bootstrap support for H3B267 as seed ortholog is 100%.
Bootstrap support for H3G6S7 as seed ortholog is 100%.

Group of orthologs #1986. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3ASU4              	100.00%		H3GLD6              	100.00%
Bootstrap support for H3ASU4 as seed ortholog is 100%.
Bootstrap support for H3GLD6 as seed ortholog is 100%.

Group of orthologs #1987. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3AAY2              	100.00%		H3HBK6              	100.00%
Bootstrap support for H3AAY2 as seed ortholog is 100%.
Bootstrap support for H3HBK6 as seed ortholog is 100%.

Group of orthologs #1988. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3B200              	100.00%		H3GR11              	100.00%
Bootstrap support for H3B200 as seed ortholog is 100%.
Bootstrap support for H3GR11 as seed ortholog is 100%.

Group of orthologs #1989. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3BAW9              	100.00%		H3GKR7              	100.00%
Bootstrap support for H3BAW9 as seed ortholog is 100%.
Bootstrap support for H3GKR7 as seed ortholog is 100%.

Group of orthologs #1990. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3AKA6              	100.00%		H3HD26              	100.00%
Bootstrap support for H3AKA6 as seed ortholog is 100%.
Bootstrap support for H3HD26 as seed ortholog is 100%.

Group of orthologs #1991. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:80

M3XJN2              	100.00%		H3GKQ2              	100.00%
Bootstrap support for M3XJN2 as seed ortholog is 100%.
Bootstrap support for H3GKQ2 as seed ortholog is 94%.

Group of orthologs #1992. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.ramorum:124

H3BAX6              	100.00%		H3GX10              	100.00%
Bootstrap support for H3BAX6 as seed ortholog is 100%.
Bootstrap support for H3GX10 as seed ortholog is 100%.

Group of orthologs #1993. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.ramorum:1

H3AXE6              	100.00%		H3H1L2              	100.00%
H3BDS8              	73.79%		
H2ZTQ4              	27.74%		
Bootstrap support for H3AXE6 as seed ortholog is 45%.
Alternative seed ortholog is H3BIR7 (2 bits away from this cluster)
Bootstrap support for H3H1L2 as seed ortholog is 57%.
Alternative seed ortholog is H3GCN4 (1 bits away from this cluster)

Group of orthologs #1994. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.ramorum:10

H3B8T2              	100.00%		H3HEG0              	100.00%
H3AWN7              	59.71%		
H2ZVG0              	55.12%		
Bootstrap support for H3B8T2 as seed ortholog is 79%.
Bootstrap support for H3HEG0 as seed ortholog is 55%.
Alternative seed ortholog is H3GQD0 (10 bits away from this cluster)

Group of orthologs #1995. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:123

H3BIR1              	100.00%		H3GDF7              	100.00%
                    	       		H3GZW6              	23.11%
Bootstrap support for H3BIR1 as seed ortholog is 100%.
Bootstrap support for H3GDF7 as seed ortholog is 100%.

Group of orthologs #1996. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:123

H3BAM0              	100.00%		H3GUF8              	100.00%
                    	       		H3HAK6              	51.46%
Bootstrap support for H3BAM0 as seed ortholog is 100%.
Bootstrap support for H3GUF8 as seed ortholog is 100%.

Group of orthologs #1997. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:123

H2ZUF5              	100.00%		H3GEQ7              	100.00%
Bootstrap support for H2ZUF5 as seed ortholog is 100%.
Bootstrap support for H3GEQ7 as seed ortholog is 100%.

Group of orthologs #1998. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:40

H3A3F3              	100.00%		H3G807              	100.00%
Bootstrap support for H3A3F3 as seed ortholog is 100%.
Bootstrap support for H3G807 as seed ortholog is 99%.

Group of orthologs #1999. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:123

H3A9T0              	100.00%		H3GUX4              	100.00%
Bootstrap support for H3A9T0 as seed ortholog is 100%.
Bootstrap support for H3GUX4 as seed ortholog is 100%.

Group of orthologs #2000. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:123

H3A946              	100.00%		H3H008              	100.00%
Bootstrap support for H3A946 as seed ortholog is 100%.
Bootstrap support for H3H008 as seed ortholog is 100%.

Group of orthologs #2001. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:4

H3ACB6              	100.00%		H3HCP1              	100.00%
Bootstrap support for H3ACB6 as seed ortholog is 83%.
Bootstrap support for H3HCP1 as seed ortholog is 51%.
Alternative seed ortholog is H3GQE7 (4 bits away from this cluster)

Group of orthologs #2002. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.ramorum:123

H3B9L3              	100.00%		H3GKS2              	100.00%
Bootstrap support for H3B9L3 as seed ortholog is 100%.
Bootstrap support for H3GKS2 as seed ortholog is 100%.

Group of orthologs #2003. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:122

H3A0N6              	100.00%		H3GML2              	100.00%
H3B3I2              	48.29%		
Bootstrap support for H3A0N6 as seed ortholog is 92%.
Bootstrap support for H3GML2 as seed ortholog is 100%.

Group of orthologs #2004. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3A7I8              	100.00%		H3GMN0              	100.00%
H3AV41              	53.40%		
Bootstrap support for H3A7I8 as seed ortholog is 100%.
Bootstrap support for H3GMN0 as seed ortholog is 100%.

Group of orthologs #2005. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3ARE2              	100.00%		H3G9H6              	100.00%
H3ABV3              	24.36%		
Bootstrap support for H3ARE2 as seed ortholog is 100%.
Bootstrap support for H3G9H6 as seed ortholog is 100%.

Group of orthologs #2006. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:37

H3B6M5              	100.00%		H3GBS6              	100.00%
H3A8C7              	38.31%		
Bootstrap support for H3B6M5 as seed ortholog is 100%.
Bootstrap support for H3GBS6 as seed ortholog is 80%.

Group of orthologs #2007. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:81

H3BCY5              	100.00%		H3GFM4              	100.00%
H3B7H9              	67.89%		
Bootstrap support for H3BCY5 as seed ortholog is 100%.
Bootstrap support for H3GFM4 as seed ortholog is 99%.

Group of orthologs #2008. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3B0D2              	100.00%		H3GU90              	100.00%
H2ZXB3              	18.82%		
Bootstrap support for H3B0D2 as seed ortholog is 100%.
Bootstrap support for H3GU90 as seed ortholog is 100%.

Group of orthologs #2009. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3B3A9              	100.00%		H3G733              	100.00%
Bootstrap support for H3B3A9 as seed ortholog is 100%.
Bootstrap support for H3G733 as seed ortholog is 100%.

Group of orthologs #2010. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3A5B8              	100.00%		H3HCV1              	100.00%
Bootstrap support for H3A5B8 as seed ortholog is 100%.
Bootstrap support for H3HCV1 as seed ortholog is 100%.

Group of orthologs #2011. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3BCA4              	100.00%		H3GGG5              	100.00%
Bootstrap support for H3BCA4 as seed ortholog is 100%.
Bootstrap support for H3GGG5 as seed ortholog is 100%.

Group of orthologs #2012. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.ramorum:122

H3B8Q1              	100.00%		H3GTK7              	100.00%
Bootstrap support for H3B8Q1 as seed ortholog is 64%.
Alternative seed ortholog is H3B6A1 (9 bits away from this cluster)
Bootstrap support for H3GTK7 as seed ortholog is 100%.

Group of orthologs #2013. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.ramorum:122

H3B090              	100.00%		H3H2T6              	100.00%
Bootstrap support for H3B090 as seed ortholog is 100%.
Bootstrap support for H3H2T6 as seed ortholog is 100%.

Group of orthologs #2014. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.ramorum:121

H3B747              	100.00%		H3GUG9              	100.00%
H3B0M0              	100.00%		H3G6V7              	100.00%
H3BH42              	21.88%		H3H8K1              	89.65%
H3B6X0              	19.97%		H3GRH9              	88.82%
H3BGS8              	15.22%		H3GRJ0              	78.05%
H3AI72              	15.08%		H3H4B6              	76.40%
H3AFF0              	13.72%		H3GRI9              	44.10%
H3AJF8              	13.45%		H3GRK2              	30.23%
H3AA69              	12.23%		
H3AMJ8              	10.73%		
H3A3R6              	9.24%		
H2ZYY8              	9.10%		
H3BGQ9              	8.56%		
H3BFM3              	7.47%		
H2ZX97              	6.35%		
H2ZX40              	6.12%		
H3AZD2              	5.84%		
H3BFN4              	5.57%		
H3BFT8              	5.57%		
H3A6C8              	5.16%		
H3BCB7              	5.03%		
Bootstrap support for H3B747 as seed ortholog is 77%.
Bootstrap support for H3B0M0 as seed ortholog is 51%.
Alternative seed ortholog is H2ZV68 (27 bits away from this cluster)
Bootstrap support for H3GUG9 as seed ortholog is 100%.
Bootstrap support for H3G6V7 as seed ortholog is 100%.

Group of orthologs #2015. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.ramorum:18

H3A0Q7              	100.00%		H3G6X4              	100.00%
H2ZTY8              	43.75%		H3G6L0              	72.03%
H3A7C6              	22.83%		H3G585              	51.05%
H2ZRV8              	8.15%		H3G740              	41.96%
                    	       		H3G6K8              	36.36%
Bootstrap support for H3A0Q7 as seed ortholog is 92%.
Bootstrap support for H3G6X4 as seed ortholog is 73%.
Alternative seed ortholog is H3H6I7 (18 bits away from this cluster)

Group of orthologs #2016. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.ramorum:121

H3AAN8              	100.00%		H3HDH3              	100.00%
H3AWP1              	54.00%		
H3B7A2              	49.10%		
Bootstrap support for H3AAN8 as seed ortholog is 79%.
Bootstrap support for H3HDH3 as seed ortholog is 100%.

Group of orthologs #2017. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:69

H3A1D0              	100.00%		H3GGS9              	100.00%
                    	       		H3HCV2              	11.13%
Bootstrap support for H3A1D0 as seed ortholog is 100%.
Bootstrap support for H3GGS9 as seed ortholog is 95%.

Group of orthologs #2018. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3ADW1              	100.00%		H3G919              	100.00%
Bootstrap support for H3ADW1 as seed ortholog is 100%.
Bootstrap support for H3G919 as seed ortholog is 100%.

Group of orthologs #2019. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3A6P3              	100.00%		H3GMA3              	100.00%
Bootstrap support for H3A6P3 as seed ortholog is 100%.
Bootstrap support for H3GMA3 as seed ortholog is 100%.

Group of orthologs #2020. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3A2N1              	100.00%		H3GX09              	100.00%
Bootstrap support for H3A2N1 as seed ortholog is 100%.
Bootstrap support for H3GX09 as seed ortholog is 100%.

Group of orthologs #2021. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3AK91              	100.00%		H3GK55              	100.00%
Bootstrap support for H3AK91 as seed ortholog is 100%.
Bootstrap support for H3GK55 as seed ortholog is 100%.

Group of orthologs #2022. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3A876              	100.00%		H3GZU6              	100.00%
Bootstrap support for H3A876 as seed ortholog is 100%.
Bootstrap support for H3GZU6 as seed ortholog is 100%.

Group of orthologs #2023. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3AGT9              	100.00%		H3GZN0              	100.00%
Bootstrap support for H3AGT9 as seed ortholog is 100%.
Bootstrap support for H3GZN0 as seed ortholog is 100%.

Group of orthologs #2024. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3B0Q9              	100.00%		H3GSA3              	100.00%
Bootstrap support for H3B0Q9 as seed ortholog is 100%.
Bootstrap support for H3GSA3 as seed ortholog is 100%.

Group of orthologs #2025. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.ramorum:24

H3AVE3              	100.00%		H3HAW8              	100.00%
Bootstrap support for H3AVE3 as seed ortholog is 73%.
Alternative seed ortholog is H3AQ30 (15 bits away from this cluster)
Bootstrap support for H3HAW8 as seed ortholog is 78%.

Group of orthologs #2026. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3AXF9              	100.00%		H3HAV5              	100.00%
Bootstrap support for H3AXF9 as seed ortholog is 100%.
Bootstrap support for H3HAV5 as seed ortholog is 100%.

Group of orthologs #2027. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3BG60              	100.00%		H3GYK3              	100.00%
Bootstrap support for H3BG60 as seed ortholog is 100%.
Bootstrap support for H3GYK3 as seed ortholog is 100%.

Group of orthologs #2028. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:21

H3B6E9              	100.00%		H3HCW2              	100.00%
Bootstrap support for H3B6E9 as seed ortholog is 100%.
Bootstrap support for H3HCW2 as seed ortholog is 70%.
Alternative seed ortholog is H3GTP5 (21 bits away from this cluster)

Group of orthologs #2029. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.ramorum:121

H3BD85              	100.00%		H3HBL0              	100.00%
Bootstrap support for H3BD85 as seed ortholog is 100%.
Bootstrap support for H3HBL0 as seed ortholog is 100%.

Group of orthologs #2030. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:68

H3AHF4              	100.00%		H3GY59              	100.00%
                    	       		H3GAP6              	68.56%
                    	       		H3GJX2              	53.89%
                    	       		H3G9N5              	45.21%
                    	       		H3GAP4              	35.63%
                    	       		H3H2C8              	29.64%
                    	       		H3HB03              	28.14%
                    	       		H3GD29              	27.84%
                    	       		H3GSI6              	26.35%
                    	       		H3H2D1              	24.25%
                    	       		H3H0I3              	24.25%
                    	       		H3H2D3              	24.25%
                    	       		H3H590              	23.95%
                    	       		H3GM66              	20.36%
Bootstrap support for H3AHF4 as seed ortholog is 94%.
Bootstrap support for H3GY59 as seed ortholog is 99%.

Group of orthologs #2031. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.ramorum:46

H3A6E8              	100.00%		H3GED6              	100.00%
H3AK03              	40.20%		H3GJY4              	31.21%
H3BH48              	23.30%		
Bootstrap support for H3A6E8 as seed ortholog is 71%.
Alternative seed ortholog is H3AUF3 (20 bits away from this cluster)
Bootstrap support for H3GED6 as seed ortholog is 93%.

Group of orthologs #2032. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.ramorum:120

H3A116              	100.00%		H3GFI7              	100.00%
H3BEW6              	40.32%		
Bootstrap support for H3A116 as seed ortholog is 100%.
Bootstrap support for H3GFI7 as seed ortholog is 100%.

Group of orthologs #2033. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.ramorum:1

H3AU78              	100.00%		H3GRD8              	100.00%
H3B227              	46.64%		
Bootstrap support for H3AU78 as seed ortholog is 68%.
Alternative seed ortholog is H2ZUS1 (21 bits away from this cluster)
Bootstrap support for H3GRD8 as seed ortholog is 46%.
Alternative seed ortholog is H3GPZ2 (1 bits away from this cluster)

Group of orthologs #2034. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.ramorum:120

H3A3S5              	100.00%		H3GKA5              	100.00%
Bootstrap support for H3A3S5 as seed ortholog is 100%.
Bootstrap support for H3GKA5 as seed ortholog is 100%.

Group of orthologs #2035. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.ramorum:120

H3BFD4              	100.00%		H3GHQ5              	100.00%
Bootstrap support for H3BFD4 as seed ortholog is 100%.
Bootstrap support for H3GHQ5 as seed ortholog is 100%.

Group of orthologs #2036. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:119

H3AHL2              	100.00%		H3GVA2              	54.10%
H3BFW3              	100.00%		H3GVA3              	100.00%
H3APM5              	35.93%		H3GEF0              	8.21%
Bootstrap support for H3AHL2 as seed ortholog is 96%.
Bootstrap support for H3BFW3 as seed ortholog is 97%.
Bootstrap support for H3GVA3 as seed ortholog is 100%.

Group of orthologs #2037. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3B9M3              	100.00%		H3HCQ4              	100.00%
H3AGN1              	45.68%		
H3B7D6              	11.34%		
H3AVA6              	7.39%		
H3ARM0              	5.63%		
Bootstrap support for H3B9M3 as seed ortholog is 100%.
Bootstrap support for H3HCQ4 as seed ortholog is 100%.

Group of orthologs #2038. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:119

H2ZXF2              	100.00%		H3GGZ3              	100.00%
H3ASG5              	37.57%		
H3APZ9              	13.21%		
Bootstrap support for H2ZXF2 as seed ortholog is 91%.
Bootstrap support for H3GGZ3 as seed ortholog is 100%.

Group of orthologs #2039. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:119

H3A9R9              	100.00%		H3GJ58              	100.00%
H3ARQ4              	26.02%		
H3BDW4              	25.32%		
Bootstrap support for H3A9R9 as seed ortholog is 61%.
Alternative seed ortholog is H3AF80 (12 bits away from this cluster)
Bootstrap support for H3GJ58 as seed ortholog is 100%.

Group of orthologs #2040. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.ramorum:65

H3A9H8              	100.00%		H3GBM1              	100.00%
H3A752              	5.18%		
Bootstrap support for H3A9H8 as seed ortholog is 95%.
Bootstrap support for H3GBM1 as seed ortholog is 91%.

Group of orthologs #2041. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3A1E6              	100.00%		H3GPE6              	100.00%
H3ATQ5              	37.57%		
Bootstrap support for H3A1E6 as seed ortholog is 100%.
Bootstrap support for H3GPE6 as seed ortholog is 100%.

Group of orthologs #2042. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3B1K4              	100.00%		H3GFP6              	100.00%
H3BCX0              	11.79%		
Bootstrap support for H3B1K4 as seed ortholog is 100%.
Bootstrap support for H3GFP6 as seed ortholog is 100%.

Group of orthologs #2043. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:51

H3B281              	100.00%		H3GGZ6              	100.00%
Bootstrap support for H3B281 as seed ortholog is 99%.
Bootstrap support for H3GGZ6 as seed ortholog is 97%.

Group of orthologs #2044. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:20

H3AJA5              	100.00%		H3H1D6              	100.00%
Bootstrap support for H3AJA5 as seed ortholog is 100%.
Bootstrap support for H3H1D6 as seed ortholog is 70%.
Alternative seed ortholog is H3GIL2 (20 bits away from this cluster)

Group of orthologs #2045. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3BET7              	100.00%		H3GC05              	100.00%
Bootstrap support for H3BET7 as seed ortholog is 100%.
Bootstrap support for H3GC05 as seed ortholog is 100%.

Group of orthologs #2046. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3BBQ7              	100.00%		H3GI68              	100.00%
Bootstrap support for H3BBQ7 as seed ortholog is 100%.
Bootstrap support for H3GI68 as seed ortholog is 100%.

Group of orthologs #2047. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3B9K8              	100.00%		H3H3Q9              	100.00%
Bootstrap support for H3B9K8 as seed ortholog is 100%.
Bootstrap support for H3H3Q9 as seed ortholog is 100%.

Group of orthologs #2048. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

H3BCU7              	100.00%		H3HAX9              	100.00%
Bootstrap support for H3BCU7 as seed ortholog is 100%.
Bootstrap support for H3HAX9 as seed ortholog is 100%.

Group of orthologs #2049. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.ramorum:119

M3XHH6              	100.00%		H3HAV3              	100.00%
Bootstrap support for M3XHH6 as seed ortholog is 100%.
Bootstrap support for H3HAV3 as seed ortholog is 100%.

Group of orthologs #2050. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:118

H3AU43              	100.00%		H3GMF0              	100.00%
H3A766              	100.00%		H3GC07              	100.00%
H3B223              	72.46%		H3GMF1              	41.67%
H3A9X5              	64.28%		H3GRZ4              	34.47%
H3AD29              	56.10%		H3GU05              	33.98%
H3AY04              	55.33%		H3GTZ9              	29.50%
H3A109              	52.30%		H3GRX5              	29.41%
H3A1I8              	50.71%		H3GXX7              	28.33%
H3B0W4              	48.72%		H3GMQ9              	27.85%
H3B8K4              	45.07%		H3GMR4              	27.36%
H3AUH0              	42.51%		H3GMR2              	26.58%
H3AYV3              	28.05%		H3GMR1              	25.80%
H3A6S8              	9.20%		H3GZ86              	25.32%
H3BEV2              	6.21%		H3GC01              	24.93%
                    	       		H3GUT7              	23.66%
                    	       		H3H0I9              	22.88%
                    	       		H3HAZ5              	22.78%
                    	       		H3GCN5              	22.59%
                    	       		H3GTX9              	21.03%
                    	       		H3HD36              	20.16%
                    	       		H3GXX9              	19.38%
                    	       		H3GXX4              	16.65%
                    	       		H3H924              	6.82%
                    	       		H3GU95              	6.07%
Bootstrap support for H3AU43 as seed ortholog is 78%.
Bootstrap support for H3A766 as seed ortholog is 65%.
Alternative seed ortholog is H3AQ80 (28 bits away from this cluster)
Bootstrap support for H3GMF0 as seed ortholog is 100%.
Bootstrap support for H3GC07 as seed ortholog is 100%.

Group of orthologs #2051. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:43

H3AXG2              	30.82%		H3GXI0              	100.00%
H3A0T2              	100.00%		H3H5Z0              	100.00%
H3A682              	24.07%		H3H8H3              	64.34%
H3AKT5              	21.69%		H3H7W1              	55.35%
H3A290              	14.02%		H3GYS7              	52.93%
                    	       		H3H3U7              	50.40%
                    	       		H3GF67              	18.96%
                    	       		H3GDV4              	17.99%
                    	       		H3GLK0              	14.61%
                    	       		H3H689              	5.02%
Bootstrap support for H3A0T2 as seed ortholog is 94%.
Bootstrap support for H3GXI0 as seed ortholog is 83%.
Bootstrap support for H3H5Z0 as seed ortholog is 82%.

Group of orthologs #2052. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.ramorum:118

H3AJA2              	100.00%		H3GUR5              	100.00%
                    	       		H3GM83              	6.48%
Bootstrap support for H3AJA2 as seed ortholog is 64%.
Alternative seed ortholog is H3BFX3 (16 bits away from this cluster)
Bootstrap support for H3GUR5 as seed ortholog is 100%.

Group of orthologs #2053. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.ramorum:118

H3BDL3              	100.00%		H3GGL8              	100.00%
H3AYA3              	56.32%		
Bootstrap support for H3BDL3 as seed ortholog is 100%.
Bootstrap support for H3GGL8 as seed ortholog is 100%.

Group of orthologs #2054. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.ramorum:9

H3A4T6              	100.00%		H3GD53              	100.00%
Bootstrap support for H3A4T6 as seed ortholog is 59%.
Alternative seed ortholog is H3A8M8 (14 bits away from this cluster)
Bootstrap support for H3GD53 as seed ortholog is 59%.
Alternative seed ortholog is H3GU11 (9 bits away from this cluster)

Group of orthologs #2055. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.ramorum:118

H3A5B6              	100.00%		H3GGZ8              	100.00%
Bootstrap support for H3A5B6 as seed ortholog is 100%.
Bootstrap support for H3GGZ8 as seed ortholog is 100%.

Group of orthologs #2056. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:118

H3AYV4              	100.00%		H3GBL7              	100.00%
Bootstrap support for H3AYV4 as seed ortholog is 98%.
Bootstrap support for H3GBL7 as seed ortholog is 100%.

Group of orthologs #2057. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.ramorum:118

H3B1E1              	100.00%		H3GFM2              	100.00%
Bootstrap support for H3B1E1 as seed ortholog is 100%.
Bootstrap support for H3GFM2 as seed ortholog is 100%.

Group of orthologs #2058. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:118

H3AZN4              	100.00%		H3GL47              	100.00%
Bootstrap support for H3AZN4 as seed ortholog is 78%.
Bootstrap support for H3GL47 as seed ortholog is 100%.

Group of orthologs #2059. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.ramorum:118

H3BDX1              	100.00%		H3GGU0              	100.00%
Bootstrap support for H3BDX1 as seed ortholog is 100%.
Bootstrap support for H3GGU0 as seed ortholog is 100%.

Group of orthologs #2060. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.ramorum:118

M3XIL1              	100.00%		H3GCL4              	100.00%
Bootstrap support for M3XIL1 as seed ortholog is 100%.
Bootstrap support for H3GCL4 as seed ortholog is 100%.

Group of orthologs #2061. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:117

H3AJJ9              	100.00%		H3GH12              	100.00%
H3BCN0              	67.89%		H3GH13              	63.95%
H3B2E3              	30.37%		
Bootstrap support for H3AJJ9 as seed ortholog is 100%.
Bootstrap support for H3GH12 as seed ortholog is 100%.

Group of orthologs #2062. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:117

M3XGM8              	100.00%		H3GMU1              	100.00%
H3AMA9              	21.55%		
Bootstrap support for M3XGM8 as seed ortholog is 100%.
Bootstrap support for H3GMU1 as seed ortholog is 100%.

Group of orthologs #2063. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:50

H3AT15              	100.00%		H3HC29              	100.00%
H3AAF7              	16.39%		
Bootstrap support for H3AT15 as seed ortholog is 100%.
Bootstrap support for H3HC29 as seed ortholog is 88%.

Group of orthologs #2064. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:117

H3ADY2              	100.00%		H3G9P5              	100.00%
Bootstrap support for H3ADY2 as seed ortholog is 100%.
Bootstrap support for H3G9P5 as seed ortholog is 100%.

Group of orthologs #2065. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.ramorum:117

H3AZH3              	100.00%		H3GDV9              	100.00%
Bootstrap support for H3AZH3 as seed ortholog is 100%.
Bootstrap support for H3GDV9 as seed ortholog is 100%.

Group of orthologs #2066. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:117

H3A9U6              	100.00%		H3HEG7              	100.00%
Bootstrap support for H3A9U6 as seed ortholog is 97%.
Bootstrap support for H3HEG7 as seed ortholog is 100%.

Group of orthologs #2067. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.ramorum:116

H3B0T1              	100.00%		H3GQJ1              	100.00%
H3BBB2              	19.16%		H3GQH4              	34.69%
H2ZVK5              	18.95%		H3GES5              	34.69%
H3AT25              	17.99%		H3GQH3              	33.62%
H3A784              	17.45%		H3GES4              	33.08%
H3B9S0              	16.27%		H3GAC8              	28.37%
Bootstrap support for H3B0T1 as seed ortholog is 56%.
Alternative seed ortholog is H3AS27 (14 bits away from this cluster)
Bootstrap support for H3GQJ1 as seed ortholog is 100%.

Group of orthologs #2068. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

M3XJM0              	100.00%		H3GCZ6              	100.00%
                    	       		H3GCZ5              	79.85%
                    	       		H3GCZ7              	76.08%
                    	       		H3GCY7              	71.88%
                    	       		H3G6M1              	69.07%
Bootstrap support for M3XJM0 as seed ortholog is 100%.
Bootstrap support for H3GCZ6 as seed ortholog is 100%.

Group of orthologs #2069. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:50

H3APW6              	100.00%		H3GIS8              	100.00%
H3AYK9              	100.00%		H3G551              	100.00%
H3B037              	100.00%		
Bootstrap support for H3APW6 as seed ortholog is 100%.
Bootstrap support for H3AYK9 as seed ortholog is 100%.
Bootstrap support for H3B037 as seed ortholog is 100%.
Bootstrap support for H3GIS8 as seed ortholog is 97%.
Bootstrap support for H3G551 as seed ortholog is 94%.

Group of orthologs #2070. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3A0T0              	100.00%		H3G8L4              	100.00%
Bootstrap support for H3A0T0 as seed ortholog is 100%.
Bootstrap support for H3G8L4 as seed ortholog is 100%.

Group of orthologs #2071. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3AUA2              	100.00%		H3G7K5              	100.00%
Bootstrap support for H3AUA2 as seed ortholog is 100%.
Bootstrap support for H3G7K5 as seed ortholog is 100%.

Group of orthologs #2072. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3B636              	100.00%		H3G881              	100.00%
Bootstrap support for H3B636 as seed ortholog is 100%.
Bootstrap support for H3G881 as seed ortholog is 100%.

Group of orthologs #2073. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3ASQ2              	100.00%		H3GM28              	100.00%
Bootstrap support for H3ASQ2 as seed ortholog is 100%.
Bootstrap support for H3GM28 as seed ortholog is 100%.

Group of orthologs #2074. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3A122              	100.00%		H3HAS4              	100.00%
Bootstrap support for H3A122 as seed ortholog is 100%.
Bootstrap support for H3HAS4 as seed ortholog is 100%.

Group of orthologs #2075. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3B0R0              	100.00%		H3GRX7              	100.00%
Bootstrap support for H3B0R0 as seed ortholog is 100%.
Bootstrap support for H3GRX7 as seed ortholog is 100%.

Group of orthologs #2076. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.ramorum:116

H3B0G2              	100.00%		H3H1G3              	100.00%
Bootstrap support for H3B0G2 as seed ortholog is 100%.
Bootstrap support for H3H1G3 as seed ortholog is 100%.

Group of orthologs #2077. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3A8M1              	100.00%		H3GGB6              	100.00%
                    	       		H3GGC7              	100.00%
                    	       		H3GGB7              	94.49%
                    	       		H3GGB2              	67.85%
                    	       		H3GGB5              	67.06%
Bootstrap support for H3A8M1 as seed ortholog is 100%.
Bootstrap support for H3GGB6 as seed ortholog is 100%.
Bootstrap support for H3GGC7 as seed ortholog is 100%.

Group of orthologs #2078. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:115

H3A475              	100.00%		H3GEA7              	100.00%
Bootstrap support for H3A475 as seed ortholog is 87%.
Bootstrap support for H3GEA7 as seed ortholog is 100%.

Group of orthologs #2079. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3ASH2              	100.00%		H3GA96              	100.00%
Bootstrap support for H3ASH2 as seed ortholog is 100%.
Bootstrap support for H3GA96 as seed ortholog is 100%.

Group of orthologs #2080. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3B068              	100.00%		H3G8M6              	100.00%
Bootstrap support for H3B068 as seed ortholog is 100%.
Bootstrap support for H3G8M6 as seed ortholog is 100%.

Group of orthologs #2081. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3B6K4              	100.00%		H3GFD9              	100.00%
Bootstrap support for H3B6K4 as seed ortholog is 100%.
Bootstrap support for H3GFD9 as seed ortholog is 100%.

Group of orthologs #2082. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3BHG0              	100.00%		H3GBU9              	100.00%
Bootstrap support for H3BHG0 as seed ortholog is 100%.
Bootstrap support for H3GBU9 as seed ortholog is 100%.

Group of orthologs #2083. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3B877              	100.00%		H3GLU3              	100.00%
Bootstrap support for H3B877 as seed ortholog is 100%.
Bootstrap support for H3GLU3 as seed ortholog is 100%.

Group of orthologs #2084. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.ramorum:115

H3AS15              	100.00%		H3HAY4              	100.00%
Bootstrap support for H3AS15 as seed ortholog is 100%.
Bootstrap support for H3HAY4 as seed ortholog is 100%.

Group of orthologs #2085. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:114

H2ZYA7              	100.00%		H3GGY0              	100.00%
H2ZS49              	43.10%		
Bootstrap support for H2ZYA7 as seed ortholog is 100%.
Bootstrap support for H3GGY0 as seed ortholog is 100%.

Group of orthologs #2086. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:114

H3AIG7              	100.00%		H3GIM7              	100.00%
H3ABI1              	42.89%		
Bootstrap support for H3AIG7 as seed ortholog is 100%.
Bootstrap support for H3GIM7 as seed ortholog is 100%.

Group of orthologs #2087. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:114

H3BAP1              	100.00%		H3HAT2              	100.00%
H2ZVA3              	13.27%		
Bootstrap support for H3BAP1 as seed ortholog is 100%.
Bootstrap support for H3HAT2 as seed ortholog is 100%.

Group of orthologs #2088. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:114

H2ZZ01              	100.00%		H3GHM6              	100.00%
Bootstrap support for H2ZZ01 as seed ortholog is 100%.
Bootstrap support for H3GHM6 as seed ortholog is 100%.

Group of orthologs #2089. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:114

H3BDL8              	100.00%		H3G809              	100.00%
Bootstrap support for H3BDL8 as seed ortholog is 100%.
Bootstrap support for H3G809 as seed ortholog is 100%.

Group of orthologs #2090. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.ramorum:114

M3XH34              	100.00%		H3GJN9              	100.00%
Bootstrap support for M3XH34 as seed ortholog is 100%.
Bootstrap support for H3GJN9 as seed ortholog is 100%.

Group of orthologs #2091. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H2ZX28              	100.00%		H3HCR2              	100.00%
H3A4W1              	100.00%		H3HCU8              	100.00%
H3BGG4              	75.62%		
H3A2D7              	75.06%		
H3BG81              	68.17%		
H3A4X5              	65.80%		
H3B809              	61.17%		
H3AQR6              	19.30%		
H2ZWY7              	15.91%		
H3B5S3              	15.80%		
H3AG12              	15.35%		
H3A5K6              	14.00%		
H3B0U9              	13.66%		
H3B9G6              	13.54%		
H3APY9              	13.43%		
H3B4I1              	12.53%		
H3BGC7              	12.42%		
H3AHB9              	11.51%		
H3BCP8              	11.06%		
H3A524              	10.95%		
Bootstrap support for H2ZX28 as seed ortholog is 100%.
Bootstrap support for H3A4W1 as seed ortholog is 100%.
Bootstrap support for H3HCR2 as seed ortholog is 100%.
Bootstrap support for H3HCU8 as seed ortholog is 100%.

Group of orthologs #2092. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.ramorum:113

H3B5I8              	100.00%		H3GCD9              	11.56%
H3BC57              	100.00%		H3GIF5              	100.00%
H3B7S2              	63.64%		H3GSM0              	7.93%
H3B786              	17.99%		H3GD78              	7.53%
H2ZT54              	15.91%		
Bootstrap support for H3B5I8 as seed ortholog is 74%.
Alternative seed ortholog is H3B5K6 (29 bits away from this cluster)
Bootstrap support for H3BC57 as seed ortholog is 77%.
Bootstrap support for H3GIF5 as seed ortholog is 100%.

Group of orthologs #2093. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:113

H3BCF8              	100.00%		H3H5E3              	100.00%
                    	       		H3GF51              	45.71%
                    	       		H3H5E4              	33.71%
                    	       		H3H5E2              	5.52%
Bootstrap support for H3BCF8 as seed ortholog is 95%.
Bootstrap support for H3H5E3 as seed ortholog is 100%.

Group of orthologs #2094. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:15

H3AM06              	100.00%		H3G5G2              	100.00%
M3XK16              	66.67%		
H3A0Z3              	36.59%		
Bootstrap support for H3AM06 as seed ortholog is 100%.
Bootstrap support for H3G5G2 as seed ortholog is 78%.

Group of orthologs #2095. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H3AKS4              	100.00%		H3H019              	100.00%
H3AGN2              	19.49%		
H3ARQ0              	5.81%		
Bootstrap support for H3AKS4 as seed ortholog is 100%.
Bootstrap support for H3H019 as seed ortholog is 100%.

Group of orthologs #2096. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H3A4E1              	100.00%		H3G6D7              	100.00%
M3XGN6              	58.12%		
Bootstrap support for H3A4E1 as seed ortholog is 100%.
Bootstrap support for H3G6D7 as seed ortholog is 100%.

Group of orthologs #2097. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

M3XJ13              	100.00%		H3HA69              	100.00%
                    	       		H3H9T6              	86.51%
Bootstrap support for M3XJ13 as seed ortholog is 100%.
Bootstrap support for H3HA69 as seed ortholog is 100%.

Group of orthologs #2098. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H3A2C5              	100.00%		H3GS62              	100.00%
Bootstrap support for H3A2C5 as seed ortholog is 100%.
Bootstrap support for H3GS62 as seed ortholog is 100%.

Group of orthologs #2099. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H3A5C3              	100.00%		H3H255              	100.00%
Bootstrap support for H3A5C3 as seed ortholog is 100%.
Bootstrap support for H3H255 as seed ortholog is 100%.

Group of orthologs #2100. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H3BGK8              	100.00%		H3GLZ6              	100.00%
Bootstrap support for H3BGK8 as seed ortholog is 100%.
Bootstrap support for H3GLZ6 as seed ortholog is 100%.

Group of orthologs #2101. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.ramorum:113

H3AZ04              	100.00%		H3HC78              	100.00%
Bootstrap support for H3AZ04 as seed ortholog is 100%.
Bootstrap support for H3HC78 as seed ortholog is 100%.

Group of orthologs #2102. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:112

H3A6Y0              	100.00%		H3H5R3              	100.00%
H3ARX0              	100.00%		H3GHN5              	100.00%
H3A1E3              	83.62%		
H3A8P7              	82.03%		
H3B7L0              	76.45%		
H3B362              	75.43%		
H2ZY22              	75.20%		
H3BEN4              	70.99%		
H3AQ33              	70.88%		
H3AH25              	69.74%		
H2ZY19              	68.37%		
H3B6R6              	62.46%		
H3AF17              	59.50%		
H2ZT93              	51.54%		
H3ARV4              	46.05%		
H3A927              	40.96%		
H3AUA9              	37.66%		
H2ZTQ3              	24.80%		
H3A5U7              	16.50%		
H3BEL7              	14.56%		
H2ZWK5              	14.33%		
H2ZXV7              	11.72%		
H3B8Q5              	7.52%		
H2ZWC6              	6.14%		
H3AT69              	5.61%		
H3AUI6              	5.33%		
H3ADV8              	5.01%		
Bootstrap support for H3A6Y0 as seed ortholog is 100%.
Bootstrap support for H3ARX0 as seed ortholog is 100%.
Bootstrap support for H3H5R3 as seed ortholog is 100%.
Bootstrap support for H3GHN5 as seed ortholog is 100%.

Group of orthologs #2103. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:112

H3A3Z2              	100.00%		H3GWE3              	100.00%
Bootstrap support for H3A3Z2 as seed ortholog is 100%.
Bootstrap support for H3GWE3 as seed ortholog is 100%.

Group of orthologs #2104. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:58

H3B6C2              	100.00%		H3GFM0              	100.00%
Bootstrap support for H3B6C2 as seed ortholog is 100%.
Bootstrap support for H3GFM0 as seed ortholog is 99%.

Group of orthologs #2105. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:112

H3B7N5              	100.00%		H3GI73              	100.00%
Bootstrap support for H3B7N5 as seed ortholog is 100%.
Bootstrap support for H3GI73 as seed ortholog is 100%.

Group of orthologs #2106. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:112

H3BDI5              	100.00%		H3GHR7              	100.00%
Bootstrap support for H3BDI5 as seed ortholog is 100%.
Bootstrap support for H3GHR7 as seed ortholog is 100%.

Group of orthologs #2107. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:112

H3BAL3              	100.00%		H3GU73              	100.00%
Bootstrap support for H3BAL3 as seed ortholog is 100%.
Bootstrap support for H3GU73 as seed ortholog is 100%.

Group of orthologs #2108. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.ramorum:112

H3BH21              	100.00%		H3GY35              	100.00%
Bootstrap support for H3BH21 as seed ortholog is 100%.
Bootstrap support for H3GY35 as seed ortholog is 100%.

Group of orthologs #2109. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:42

H3ALS9              	100.00%		H3GMY7              	100.00%
H3AHW9              	100.00%		H3GMQ4              	100.00%
H3A009              	100.00%		H3GH90              	100.00%
H3A9F1              	65.67%		H3GMQ3              	90.06%
H3AEZ9              	64.73%		H3GH89              	72.80%
H3A827              	60.04%		H3GMQ5              	66.20%
H3A981              	39.96%		H3GMQ2              	65.73%
H3AUZ7              	39.79%		H3H5E6              	51.46%
H3ATR4              	39.43%		H3H6B3              	46.55%
H3B3X6              	36.13%		
H2ZXM3              	34.64%		
H3APS3              	26.67%		
H3A3I2              	19.14%		
Bootstrap support for H3ALS9 as seed ortholog is 100%.
Bootstrap support for H3AHW9 as seed ortholog is 100%.
Bootstrap support for H3A009 as seed ortholog is 100%.
Bootstrap support for H3GMY7 as seed ortholog is 85%.
Bootstrap support for H3GMQ4 as seed ortholog is 71%.
Alternative seed ortholog is H3GS51 (42 bits away from this cluster)
Bootstrap support for H3GH90 as seed ortholog is 69%.
Alternative seed ortholog is H3GS51 (42 bits away from this cluster)

Group of orthologs #2110. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3BDZ9              	100.00%		H3GZZ5              	100.00%
H3B3E2              	70.72%		
H3A4X0              	70.44%		
H3B0V9              	59.03%		
H3AM96              	10.08%		
H3APN4              	7.13%		
H2ZSW4              	6.56%		
H3APQ2              	6.08%		
Bootstrap support for H3BDZ9 as seed ortholog is 100%.
Bootstrap support for H3GZZ5 as seed ortholog is 100%.

Group of orthologs #2111. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3AV08              	100.00%		H3GX89              	100.00%
H2ZYI6              	32.96%		H3GF33              	17.11%
                    	       		H3GME2              	7.22%
Bootstrap support for H3AV08 as seed ortholog is 100%.
Bootstrap support for H3GX89 as seed ortholog is 100%.

Group of orthologs #2112. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3ARZ6              	100.00%		H3H4G7              	100.00%
                    	       		H3GB35              	62.42%
                    	       		H3GAW2              	61.15%
                    	       		H3GFV7              	50.32%
Bootstrap support for H3ARZ6 as seed ortholog is 100%.
Bootstrap support for H3H4G7 as seed ortholog is 100%.

Group of orthologs #2113. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

M3XHK2              	100.00%		H3HB91              	100.00%
H3A224              	39.42%		
H3A7F7              	21.55%		
Bootstrap support for M3XHK2 as seed ortholog is 100%.
Bootstrap support for H3HB91 as seed ortholog is 100%.

Group of orthologs #2114. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:36

H2ZXN6              	100.00%		H3GM53              	100.00%
H3A7D1              	40.71%		
Bootstrap support for H2ZXN6 as seed ortholog is 100%.
Bootstrap support for H3GM53 as seed ortholog is 89%.

Group of orthologs #2115. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3ABR9              	100.00%		H3G9V9              	100.00%
H3A3N3              	96.77%		
Bootstrap support for H3ABR9 as seed ortholog is 100%.
Bootstrap support for H3G9V9 as seed ortholog is 100%.

Group of orthologs #2116. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3AIN7              	100.00%		H3GIJ6              	100.00%
H3ABZ6              	51.11%		
Bootstrap support for H3AIN7 as seed ortholog is 100%.
Bootstrap support for H3GIJ6 as seed ortholog is 100%.

Group of orthologs #2117. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3BEF8              	100.00%		H3GYE1              	100.00%
H3A875              	52.20%		
Bootstrap support for H3BEF8 as seed ortholog is 100%.
Bootstrap support for H3GYE1 as seed ortholog is 100%.

Group of orthologs #2118. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:42

H3A0K1              	100.00%		H3G754              	100.00%
Bootstrap support for H3A0K1 as seed ortholog is 100%.
Bootstrap support for H3G754 as seed ortholog is 97%.

Group of orthologs #2119. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H2ZZE0              	100.00%		H3GCZ1              	100.00%
Bootstrap support for H2ZZE0 as seed ortholog is 100%.
Bootstrap support for H3GCZ1 as seed ortholog is 100%.

Group of orthologs #2120. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3ADU3              	100.00%		H3G8W9              	100.00%
Bootstrap support for H3ADU3 as seed ortholog is 100%.
Bootstrap support for H3G8W9 as seed ortholog is 100%.

Group of orthologs #2121. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:111

H3A631              	100.00%		H3GMF9              	100.00%
Bootstrap support for H3A631 as seed ortholog is 88%.
Bootstrap support for H3GMF9 as seed ortholog is 100%.

Group of orthologs #2122. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:56

H3A805              	100.00%		H3GPP7              	100.00%
Bootstrap support for H3A805 as seed ortholog is 94%.
Bootstrap support for H3GPP7 as seed ortholog is 93%.

Group of orthologs #2123. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:28

H3B5S7              	100.00%		H3G542              	100.00%
Bootstrap support for H3B5S7 as seed ortholog is 100%.
Bootstrap support for H3G542 as seed ortholog is 97%.

Group of orthologs #2124. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3B4S8              	100.00%		H3G7Y4              	100.00%
Bootstrap support for H3B4S8 as seed ortholog is 100%.
Bootstrap support for H3G7Y4 as seed ortholog is 100%.

Group of orthologs #2125. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3A7P4              	100.00%		H3H0P5              	100.00%
Bootstrap support for H3A7P4 as seed ortholog is 100%.
Bootstrap support for H3H0P5 as seed ortholog is 100%.

Group of orthologs #2126. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3ATI2              	100.00%		H3GKT4              	100.00%
Bootstrap support for H3ATI2 as seed ortholog is 100%.
Bootstrap support for H3GKT4 as seed ortholog is 100%.

Group of orthologs #2127. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3B594              	100.00%		H3GBM5              	100.00%
Bootstrap support for H3B594 as seed ortholog is 100%.
Bootstrap support for H3GBM5 as seed ortholog is 100%.

Group of orthologs #2128. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3B2U5              	100.00%		H3GJZ4              	100.00%
Bootstrap support for H3B2U5 as seed ortholog is 100%.
Bootstrap support for H3GJZ4 as seed ortholog is 100%.

Group of orthologs #2129. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3BBY3              	100.00%		H3GCJ7              	100.00%
Bootstrap support for H3BBY3 as seed ortholog is 100%.
Bootstrap support for H3GCJ7 as seed ortholog is 100%.

Group of orthologs #2130. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.ramorum:59

H3AK23              	100.00%		H3H110              	100.00%
Bootstrap support for H3AK23 as seed ortholog is 84%.
Bootstrap support for H3H110 as seed ortholog is 95%.

Group of orthologs #2131. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.ramorum:111

H3B0B4              	100.00%		H3GNP4              	100.00%
Bootstrap support for H3B0B4 as seed ortholog is 100%.
Bootstrap support for H3GNP4 as seed ortholog is 100%.

Group of orthologs #2132. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.ramorum:10

H3B265              	100.00%		H3HAW7              	100.00%
Bootstrap support for H3B265 as seed ortholog is 47%.
Alternative seed ortholog is H3B783 (4 bits away from this cluster)
Bootstrap support for H3HAW7 as seed ortholog is 72%.
Alternative seed ortholog is H3GLP6 (10 bits away from this cluster)

Group of orthologs #2133. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.ramorum:42

M3XL18              	100.00%		H3GES3              	100.00%
H3ADL4              	41.75%		
H3ABP0              	30.80%		
H3ALU7              	24.91%		
H3AQ35              	23.53%		
H3A1K7              	13.03%		
Bootstrap support for M3XL18 as seed ortholog is 57%.
Alternative seed ortholog is H3AGQ6 (8 bits away from this cluster)
Bootstrap support for H3GES3 as seed ortholog is 77%.

Group of orthologs #2134. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3B1I0              	100.00%		H3GW56              	100.00%
H3AFI3              	35.52%		
H3APE5              	30.88%		
H3B8B1              	8.96%		
H3ARA7              	5.92%		
Bootstrap support for H3B1I0 as seed ortholog is 100%.
Bootstrap support for H3GW56 as seed ortholog is 100%.

Group of orthologs #2135. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.ramorum:110

H3B8I4              	100.00%		H3GQT0              	100.00%
                    	       		H3GQT2              	71.61%
                    	       		H3GQS9              	68.58%
                    	       		H3GQT1              	57.20%
                    	       		H3GKJ6              	27.84%
Bootstrap support for H3B8I4 as seed ortholog is 89%.
Bootstrap support for H3GQT0 as seed ortholog is 100%.

Group of orthologs #2136. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3A4P3              	100.00%		H3GVX8              	100.00%
H2ZWG1              	29.40%		
Bootstrap support for H3A4P3 as seed ortholog is 100%.
Bootstrap support for H3GVX8 as seed ortholog is 100%.

Group of orthologs #2137. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3AV87              	100.00%		H3GR16              	100.00%
                    	       		H3GR15              	60.78%
Bootstrap support for H3AV87 as seed ortholog is 100%.
Bootstrap support for H3GR16 as seed ortholog is 100%.

Group of orthologs #2138. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:24

H3AMK9              	100.00%		H3GDZ1              	100.00%
Bootstrap support for H3AMK9 as seed ortholog is 91%.
Bootstrap support for H3GDZ1 as seed ortholog is 80%.

Group of orthologs #2139. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3B6N8              	100.00%		H3G8X3              	100.00%
Bootstrap support for H3B6N8 as seed ortholog is 100%.
Bootstrap support for H3G8X3 as seed ortholog is 100%.

Group of orthologs #2140. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3AWG5              	100.00%		H3H079              	100.00%
Bootstrap support for H3AWG5 as seed ortholog is 100%.
Bootstrap support for H3H079 as seed ortholog is 100%.

Group of orthologs #2141. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3B0W3              	100.00%		H3GXJ1              	100.00%
Bootstrap support for H3B0W3 as seed ortholog is 100%.
Bootstrap support for H3GXJ1 as seed ortholog is 100%.

Group of orthologs #2142. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3AU48              	100.00%		H3H5V2              	100.00%
Bootstrap support for H3AU48 as seed ortholog is 100%.
Bootstrap support for H3H5V2 as seed ortholog is 100%.

Group of orthologs #2143. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.ramorum:110

H3ASK4              	100.00%		H3HDA4              	100.00%
Bootstrap support for H3ASK4 as seed ortholog is 100%.
Bootstrap support for H3HDA4 as seed ortholog is 100%.

Group of orthologs #2144. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3B6Q4              	100.00%		H3GSF9              	100.00%
H3B5I2              	38.61%		
H3B442              	33.08%		
H3AJ27              	22.92%		
Bootstrap support for H3B6Q4 as seed ortholog is 100%.
Bootstrap support for H3GSF9 as seed ortholog is 100%.

Group of orthologs #2145. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3A493              	100.00%		H3GMT2              	100.00%
H3BCC3              	23.54%		
Bootstrap support for H3A493 as seed ortholog is 100%.
Bootstrap support for H3GMT2 as seed ortholog is 100%.

Group of orthologs #2146. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:32

H3AM14              	100.00%		H3GMP9              	100.00%
                    	       		H3HC90              	34.22%
Bootstrap support for H3AM14 as seed ortholog is 100%.
Bootstrap support for H3GMP9 as seed ortholog is 84%.

Group of orthologs #2147. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3A6L4              	100.00%		H3GVH5              	100.00%
Bootstrap support for H3A6L4 as seed ortholog is 100%.
Bootstrap support for H3GVH5 as seed ortholog is 100%.

Group of orthologs #2148. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.ramorum:109

H3ACZ3              	100.00%		H3GWU0              	100.00%
Bootstrap support for H3ACZ3 as seed ortholog is 56%.
Alternative seed ortholog is H3B4B0 (5 bits away from this cluster)
Bootstrap support for H3GWU0 as seed ortholog is 100%.

Group of orthologs #2149. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3AN10              	100.00%		H3GT99              	100.00%
Bootstrap support for H3AN10 as seed ortholog is 100%.
Bootstrap support for H3GT99 as seed ortholog is 100%.

Group of orthologs #2150. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3ANK0              	100.00%		H3GVL0              	100.00%
Bootstrap support for H3ANK0 as seed ortholog is 100%.
Bootstrap support for H3GVL0 as seed ortholog is 100%.

Group of orthologs #2151. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3BDU9              	100.00%		H3GLG2              	100.00%
Bootstrap support for H3BDU9 as seed ortholog is 100%.
Bootstrap support for H3GLG2 as seed ortholog is 100%.

Group of orthologs #2152. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.ramorum:109

H3BDX7              	100.00%		H3GSW8              	100.00%
Bootstrap support for H3BDX7 as seed ortholog is 100%.
Bootstrap support for H3GSW8 as seed ortholog is 100%.

Group of orthologs #2153. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.ramorum:108

H3B7K9              	100.00%		H3GYQ0              	100.00%
H3A059              	46.28%		H3GD16              	17.57%
H3AUZ8              	13.13%		H3GV91              	16.94%
H2ZVS6              	11.94%		H3GID8              	16.78%
H3AMP7              	9.34%		H3GIC1              	16.55%
H2ZTB7              	7.58%		H3GM05              	14.43%
H3B0H1              	7.51%		H3GW28              	13.80%
H3ACS7              	7.16%		H3GZA9              	11.06%
H3B0U8              	7.02%		H3HBL8              	7.14%
H3AMI0              	6.60%		H3GJL4              	6.51%
M3XJA5              	5.55%		H3GHC4              	5.41%
Bootstrap support for H3B7K9 as seed ortholog is 54%.
Alternative seed ortholog is H2ZVV5 (5 bits away from this cluster)
Bootstrap support for H3GYQ0 as seed ortholog is 100%.

Group of orthologs #2154. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3A9J9              	100.00%		H3GYH6              	100.00%
H3ABR6              	34.76%		H3H9Z6              	47.95%
H3A2D5              	31.39%		
H3A5M5              	26.46%		
Bootstrap support for H3A9J9 as seed ortholog is 100%.
Bootstrap support for H3GYH6 as seed ortholog is 100%.

Group of orthologs #2155. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3AVV1              	100.00%		H3GQR8              	100.00%
H2ZVU5              	47.89%		
H3AGH7              	43.06%		
H3B5E6              	24.00%		
Bootstrap support for H3AVV1 as seed ortholog is 100%.
Bootstrap support for H3GQR8 as seed ortholog is 100%.

Group of orthologs #2156. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.ramorum:58

H3A7J9              	100.00%		H3GMA7              	100.00%
                    	       		H3GGY9              	54.05%
                    	       		H3GM42              	18.56%
Bootstrap support for H3A7J9 as seed ortholog is 77%.
Bootstrap support for H3GMA7 as seed ortholog is 99%.

Group of orthologs #2157. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:10

H3AX05              	100.00%		H3GMH1              	100.00%
H3BCN9              	6.19%		H3GMH0              	29.06%
Bootstrap support for H3AX05 as seed ortholog is 100%.
Bootstrap support for H3GMH1 as seed ortholog is 61%.
Alternative seed ortholog is H3GBT8 (10 bits away from this cluster)

Group of orthologs #2158. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3AAT6              	100.00%		H3GY93              	100.00%
                    	       		H3GWV7              	12.22%
Bootstrap support for H3AAT6 as seed ortholog is 100%.
Bootstrap support for H3GY93 as seed ortholog is 100%.

Group of orthologs #2159. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.ramorum:108

H3AK37              	100.00%		H3GT64              	100.00%
H3B8X6              	61.62%		
Bootstrap support for H3AK37 as seed ortholog is 96%.
Bootstrap support for H3GT64 as seed ortholog is 100%.

Group of orthologs #2160. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3AM83              	100.00%		H3GVJ5              	100.00%
H3B755              	54.17%		
Bootstrap support for H3AM83 as seed ortholog is 100%.
Bootstrap support for H3GVJ5 as seed ortholog is 100%.

Group of orthologs #2161. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3AR95              	100.00%		H3GU82              	100.00%
H3B0N4              	100.00%		
Bootstrap support for H3AR95 as seed ortholog is 100%.
Bootstrap support for H3B0N4 as seed ortholog is 100%.
Bootstrap support for H3GU82 as seed ortholog is 100%.

Group of orthologs #2162. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3AVN8              	100.00%		H3GBR8              	100.00%
Bootstrap support for H3AVN8 as seed ortholog is 100%.
Bootstrap support for H3GBR8 as seed ortholog is 100%.

Group of orthologs #2163. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:66

M3XHD0              	100.00%		H3G705              	100.00%
Bootstrap support for M3XHD0 as seed ortholog is 100%.
Bootstrap support for H3G705 as seed ortholog is 100%.

Group of orthologs #2164. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3AMX0              	100.00%		H3GZH3              	100.00%
Bootstrap support for H3AMX0 as seed ortholog is 100%.
Bootstrap support for H3GZH3 as seed ortholog is 100%.

Group of orthologs #2165. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3ABJ5              	100.00%		H3HB68              	100.00%
Bootstrap support for H3ABJ5 as seed ortholog is 100%.
Bootstrap support for H3HB68 as seed ortholog is 100%.

Group of orthologs #2166. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3BGJ8              	100.00%		H3GFY1              	100.00%
Bootstrap support for H3BGJ8 as seed ortholog is 100%.
Bootstrap support for H3GFY1 as seed ortholog is 100%.

Group of orthologs #2167. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.ramorum:108

H3B9D1              	100.00%		H3GMC3              	100.00%
Bootstrap support for H3B9D1 as seed ortholog is 100%.
Bootstrap support for H3GMC3 as seed ortholog is 100%.

Group of orthologs #2168. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3BCQ3              	100.00%		H3GIV5              	100.00%
H3APU8              	100.00%		H3GIU5              	100.00%
M3XJ23              	100.00%		H3GIU0              	100.00%
H2ZXT3              	36.77%		H3GIU4              	99.08%
H3A5Q0              	26.26%		H3GIV6              	96.95%
H3AKA3              	23.59%		H3GIU2              	67.84%
H3AR30              	22.15%		H3GIU3              	34.74%
H3AA62              	18.25%		H3GUL6              	15.96%
H3AUJ4              	17.20%		
M3XJL0              	15.08%		
H3B770              	13.97%		
H3AM92              	11.61%		
H3A5V0              	10.97%		
H2ZT50              	7.53%		
Bootstrap support for H3BCQ3 as seed ortholog is 100%.
Bootstrap support for H3APU8 as seed ortholog is 100%.
Bootstrap support for M3XJ23 as seed ortholog is 100%.
Bootstrap support for H3GIV5 as seed ortholog is 100%.
Bootstrap support for H3GIU5 as seed ortholog is 100%.
Bootstrap support for H3GIU0 as seed ortholog is 100%.

Group of orthologs #2169. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H2ZVN0              	100.00%		H3GNJ7              	100.00%
H3A8Y3              	47.28%		H3GNJ6              	63.73%
                    	       		H3H858              	31.70%
                    	       		H3GNJ8              	25.82%
                    	       		H3GQA5              	23.86%
Bootstrap support for H2ZVN0 as seed ortholog is 100%.
Bootstrap support for H3GNJ7 as seed ortholog is 100%.

Group of orthologs #2170. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.ramorum:32

H3A3Y3              	100.00%		H3G9N9              	100.00%
H3B1X8              	48.46%		
H3B8R5              	38.08%		
Bootstrap support for H3A3Y3 as seed ortholog is 78%.
Bootstrap support for H3G9N9 as seed ortholog is 86%.

Group of orthologs #2171. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:15

H3A157              	100.00%		H3GSV6              	100.00%
                    	       		H3GSV5              	74.40%
                    	       		H3GSV7              	69.51%
Bootstrap support for H3A157 as seed ortholog is 100%.
Bootstrap support for H3GSV6 as seed ortholog is 60%.
Alternative seed ortholog is H3GPG2 (15 bits away from this cluster)

Group of orthologs #2172. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3ATM4              	100.00%		H3G6N5              	100.00%
H3ASV4              	33.97%		
H2ZSU0              	19.90%		
Bootstrap support for H3ATM4 as seed ortholog is 100%.
Bootstrap support for H3G6N5 as seed ortholog is 100%.

Group of orthologs #2173. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3AQA0              	100.00%		H3GKK5              	100.00%
H3AS00              	55.90%		
H3BGY6              	41.43%		
Bootstrap support for H3AQA0 as seed ortholog is 100%.
Bootstrap support for H3GKK5 as seed ortholog is 100%.

Group of orthologs #2174. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H2ZZT3              	100.00%		H3GSZ6              	100.00%
H3AJH8              	38.95%		
Bootstrap support for H2ZZT3 as seed ortholog is 100%.
Bootstrap support for H3GSZ6 as seed ortholog is 100%.

Group of orthologs #2175. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3APZ6              	100.00%		H3GBW9              	100.00%
                    	       		H3GBX0              	44.92%
Bootstrap support for H3APZ6 as seed ortholog is 100%.
Bootstrap support for H3GBW9 as seed ortholog is 100%.

Group of orthologs #2176. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:107

H3AGT1              	100.00%		H3GRI7              	100.00%
                    	       		H3H8E3              	70.12%
Bootstrap support for H3AGT1 as seed ortholog is 89%.
Bootstrap support for H3GRI7 as seed ortholog is 100%.

Group of orthologs #2177. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:107

H3APJ2              	100.00%		H3HBA1              	100.00%
H3A4K3              	45.03%		
Bootstrap support for H3APJ2 as seed ortholog is 77%.
Bootstrap support for H3HBA1 as seed ortholog is 100%.

Group of orthologs #2178. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3AQL8              	100.00%		H3GGU1              	100.00%
Bootstrap support for H3AQL8 as seed ortholog is 100%.
Bootstrap support for H3GGU1 as seed ortholog is 100%.

Group of orthologs #2179. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H2ZSC4              	100.00%		H3HCX0              	100.00%
Bootstrap support for H2ZSC4 as seed ortholog is 100%.
Bootstrap support for H3HCX0 as seed ortholog is 100%.

Group of orthologs #2180. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.ramorum:46

H3B243              	100.00%		H3GCJ4              	100.00%
Bootstrap support for H3B243 as seed ortholog is 63%.
Alternative seed ortholog is H3B139 (16 bits away from this cluster)
Bootstrap support for H3GCJ4 as seed ortholog is 66%.
Alternative seed ortholog is H3GKR9 (46 bits away from this cluster)

Group of orthologs #2181. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3B438              	100.00%		H3GDP3              	100.00%
Bootstrap support for H3B438 as seed ortholog is 100%.
Bootstrap support for H3GDP3 as seed ortholog is 100%.

Group of orthologs #2182. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3BB44              	100.00%		H3GPN9              	100.00%
Bootstrap support for H3BB44 as seed ortholog is 100%.
Bootstrap support for H3GPN9 as seed ortholog is 100%.

Group of orthologs #2183. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.ramorum:107

H3BEJ2              	100.00%		H3GQ84              	100.00%
Bootstrap support for H3BEJ2 as seed ortholog is 100%.
Bootstrap support for H3GQ84 as seed ortholog is 100%.

Group of orthologs #2184. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.ramorum:56

H3ANX7              	100.00%		H3GIU1              	100.00%
H3ACU4              	45.68%		H3GIU6              	41.51%
H2ZUW3              	30.88%		H3GC06              	20.37%
                    	       		H3GVQ7              	11.53%
Bootstrap support for H3ANX7 as seed ortholog is 72%.
Alternative seed ortholog is H3BIN3 (19 bits away from this cluster)
Bootstrap support for H3GIU1 as seed ortholog is 90%.

Group of orthologs #2185. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3AUP5              	100.00%		H3HB40              	100.00%
H3AF44              	8.75%		
H3AIM9              	7.64%		
H2ZUL9              	6.60%		
Bootstrap support for H3AUP5 as seed ortholog is 100%.
Bootstrap support for H3HB40 as seed ortholog is 100%.

Group of orthologs #2186. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.ramorum:15

H3B7X0              	100.00%		H3H8Z2              	100.00%
H3BGU7              	68.43%		
H3ABV2              	51.61%		
Bootstrap support for H3B7X0 as seed ortholog is 71%.
Alternative seed ortholog is H3B665 (22 bits away from this cluster)
Bootstrap support for H3H8Z2 as seed ortholog is 61%.
Alternative seed ortholog is H3GI43 (15 bits away from this cluster)

Group of orthologs #2187. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3AJ29              	100.00%		H3GQF7              	100.00%
H3BC78              	71.68%		
Bootstrap support for H3AJ29 as seed ortholog is 100%.
Bootstrap support for H3GQF7 as seed ortholog is 100%.

Group of orthologs #2188. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3AVQ3              	100.00%		H3GWK0              	100.00%
H3AAL5              	31.25%		
Bootstrap support for H3AVQ3 as seed ortholog is 100%.
Bootstrap support for H3GWK0 as seed ortholog is 100%.

Group of orthologs #2189. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3A8Q5              	100.00%		H3GGL5              	100.00%
Bootstrap support for H3A8Q5 as seed ortholog is 100%.
Bootstrap support for H3GGL5 as seed ortholog is 100%.

Group of orthologs #2190. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3AFF2              	100.00%		H3GEY7              	100.00%
Bootstrap support for H3AFF2 as seed ortholog is 100%.
Bootstrap support for H3GEY7 as seed ortholog is 100%.

Group of orthologs #2191. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3AGY8              	100.00%		H3GQX2              	100.00%
Bootstrap support for H3AGY8 as seed ortholog is 100%.
Bootstrap support for H3GQX2 as seed ortholog is 100%.

Group of orthologs #2192. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.ramorum:106

H3BBY1              	100.00%		H3GG42              	100.00%
Bootstrap support for H3BBY1 as seed ortholog is 100%.
Bootstrap support for H3GG42 as seed ortholog is 100%.

Group of orthologs #2193. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:106

H3AQH4              	100.00%		H3HDW9              	100.00%
Bootstrap support for H3AQH4 as seed ortholog is 87%.
Bootstrap support for H3HDW9 as seed ortholog is 100%.

Group of orthologs #2194. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:105

H3AT62              	100.00%		H3H329              	100.00%
                    	       		H3H328              	53.30%
                    	       		H3H341              	41.55%
                    	       		H3HEB8              	41.26%
                    	       		H3GXC3              	30.09%
                    	       		H3H342              	29.80%
                    	       		H3GU46              	5.44%
Bootstrap support for H3AT62 as seed ortholog is 100%.
Bootstrap support for H3H329 as seed ortholog is 100%.

Group of orthologs #2195. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:105

H3B2T4              	100.00%		H3H419              	100.00%
H3AF68              	97.35%		
H3A460              	29.14%		
Bootstrap support for H3B2T4 as seed ortholog is 100%.
Bootstrap support for H3H419 as seed ortholog is 100%.

Group of orthologs #2196. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.ramorum:105

H3B5J0              	100.00%		H3H3X7              	100.00%
H3ADR3              	39.89%		
Bootstrap support for H3B5J0 as seed ortholog is 69%.
Alternative seed ortholog is H3A9K7 (15 bits away from this cluster)
Bootstrap support for H3H3X7 as seed ortholog is 100%.

Group of orthologs #2197. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:105

H3A7L5              	100.00%		H3GG67              	100.00%
Bootstrap support for H3A7L5 as seed ortholog is 100%.
Bootstrap support for H3GG67 as seed ortholog is 100%.

Group of orthologs #2198. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:105

H3AI19              	100.00%		H3GP18              	100.00%
Bootstrap support for H3AI19 as seed ortholog is 88%.
Bootstrap support for H3GP18 as seed ortholog is 100%.

Group of orthologs #2199. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:105

H3ATT6              	100.00%		H3GIA2              	100.00%
Bootstrap support for H3ATT6 as seed ortholog is 100%.
Bootstrap support for H3GIA2 as seed ortholog is 100%.

Group of orthologs #2200. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:105

H3B2G2              	100.00%		H3GCD6              	100.00%
Bootstrap support for H3B2G2 as seed ortholog is 100%.
Bootstrap support for H3GCD6 as seed ortholog is 100%.

Group of orthologs #2201. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:105

H3B3V8              	100.00%		H3GG59              	100.00%
Bootstrap support for H3B3V8 as seed ortholog is 100%.
Bootstrap support for H3GG59 as seed ortholog is 100%.

Group of orthologs #2202. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.ramorum:23

H3ABM9              	100.00%		H3HE01              	100.00%
Bootstrap support for H3ABM9 as seed ortholog is 100%.
Bootstrap support for H3HE01 as seed ortholog is 71%.
Alternative seed ortholog is H3GMP4 (23 bits away from this cluster)

Group of orthologs #2203. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.ramorum:30

M3XJ66              	100.00%		H3H0J1              	100.00%
Bootstrap support for M3XJ66 as seed ortholog is 94%.
Bootstrap support for H3H0J1 as seed ortholog is 92%.

Group of orthologs #2204. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3AGE2              	100.00%		H3GGQ0              	100.00%
H3ATA3              	45.07%		
Bootstrap support for H3AGE2 as seed ortholog is 100%.
Bootstrap support for H3GGQ0 as seed ortholog is 100%.

Group of orthologs #2205. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3B4I6              	100.00%		H3GNM2              	100.00%
H3BDF3              	24.64%		
Bootstrap support for H3B4I6 as seed ortholog is 100%.
Bootstrap support for H3GNM2 as seed ortholog is 100%.

Group of orthologs #2206. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3BG30              	100.00%		H3HEF4              	100.00%
                    	       		H3HA43              	94.86%
Bootstrap support for H3BG30 as seed ortholog is 100%.
Bootstrap support for H3HEF4 as seed ortholog is 100%.

Group of orthologs #2207. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3ALQ5              	100.00%		H3GCB5              	100.00%
Bootstrap support for H3ALQ5 as seed ortholog is 100%.
Bootstrap support for H3GCB5 as seed ortholog is 100%.

Group of orthologs #2208. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:104

H3B2E8              	100.00%		H3G714              	100.00%
Bootstrap support for H3B2E8 as seed ortholog is 98%.
Bootstrap support for H3G714 as seed ortholog is 100%.

Group of orthologs #2209. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H2ZXZ7              	100.00%		H3H7P1              	100.00%
Bootstrap support for H2ZXZ7 as seed ortholog is 100%.
Bootstrap support for H3H7P1 as seed ortholog is 100%.

Group of orthologs #2210. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3AZ54              	100.00%		H3GE49              	100.00%
Bootstrap support for H3AZ54 as seed ortholog is 100%.
Bootstrap support for H3GE49 as seed ortholog is 100%.

Group of orthologs #2211. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:5

H3AWQ4              	100.00%		H3GK97              	100.00%
Bootstrap support for H3AWQ4 as seed ortholog is 100%.
Bootstrap support for H3GK97 as seed ortholog is 94%.

Group of orthologs #2212. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3ALM6              	100.00%		H3H2I1              	100.00%
Bootstrap support for H3ALM6 as seed ortholog is 100%.
Bootstrap support for H3H2I1 as seed ortholog is 100%.

Group of orthologs #2213. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.ramorum:104

H3BE01              	100.00%		H3GFR7              	100.00%
Bootstrap support for H3BE01 as seed ortholog is 100%.
Bootstrap support for H3GFR7 as seed ortholog is 100%.

Group of orthologs #2214. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:44

M3XGL2              	100.00%		H3GDN9              	100.00%
M3XKN6              	39.41%		
H3B303              	39.10%		
H3BCB6              	33.69%		
H3A0Q8              	28.52%		
Bootstrap support for M3XGL2 as seed ortholog is 100%.
Bootstrap support for H3GDN9 as seed ortholog is 78%.

Group of orthologs #2215. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:103

H3B8A2              	100.00%		H3GNL9              	100.00%
H3AYB0              	36.23%		
H3B7I7              	17.38%		
H3B8B8              	9.84%		
Bootstrap support for H3B8A2 as seed ortholog is 100%.
Bootstrap support for H3GNL9 as seed ortholog is 100%.

Group of orthologs #2216. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.ramorum:103

H3AZU0              	100.00%		H3GMU6              	100.00%
H3B4D7              	51.41%		
Bootstrap support for H3AZU0 as seed ortholog is 87%.
Bootstrap support for H3GMU6 as seed ortholog is 100%.

Group of orthologs #2217. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:103

H2ZTX1              	100.00%		H3GK35              	100.00%
Bootstrap support for H2ZTX1 as seed ortholog is 100%.
Bootstrap support for H3GK35 as seed ortholog is 100%.

Group of orthologs #2218. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:103

H3ATL7              	100.00%		H3GGY1              	100.00%
Bootstrap support for H3ATL7 as seed ortholog is 100%.
Bootstrap support for H3GGY1 as seed ortholog is 100%.

Group of orthologs #2219. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:103

H3BHD8              	100.00%		H3GIW5              	100.00%
Bootstrap support for H3BHD8 as seed ortholog is 100%.
Bootstrap support for H3GIW5 as seed ortholog is 100%.

Group of orthologs #2220. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:103

H3B6Q5              	100.00%		H3GZ14              	100.00%
Bootstrap support for H3B6Q5 as seed ortholog is 100%.
Bootstrap support for H3GZ14 as seed ortholog is 100%.

Group of orthologs #2221. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.ramorum:103

H3BA70              	100.00%		H3HDX2              	100.00%
Bootstrap support for H3BA70 as seed ortholog is 100%.
Bootstrap support for H3HDX2 as seed ortholog is 100%.

Group of orthologs #2222. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H3B292              	100.00%		H3G6U1              	100.00%
H3B737              	55.24%		H3G571              	61.68%
Bootstrap support for H3B292 as seed ortholog is 100%.
Bootstrap support for H3G6U1 as seed ortholog is 100%.

Group of orthologs #2223. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H3A4K9              	100.00%		H3GUM5              	100.00%
                    	       		H3GUM6              	32.34%
Bootstrap support for H3A4K9 as seed ortholog is 100%.
Bootstrap support for H3GUM5 as seed ortholog is 100%.

Group of orthologs #2224. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:102

M3XGG2              	100.00%		H3G634              	100.00%
M3XIR5              	53.93%		
Bootstrap support for M3XGG2 as seed ortholog is 97%.
Bootstrap support for H3G634 as seed ortholog is 100%.

Group of orthologs #2225. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H2ZWV9              	100.00%		H3GFE8              	100.00%
Bootstrap support for H2ZWV9 as seed ortholog is 100%.
Bootstrap support for H3GFE8 as seed ortholog is 100%.

Group of orthologs #2226. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H3AMA2              	100.00%		H3GCC1              	100.00%
Bootstrap support for H3AMA2 as seed ortholog is 100%.
Bootstrap support for H3GCC1 as seed ortholog is 100%.

Group of orthologs #2227. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H3AJ25              	100.00%		H3GM11              	100.00%
Bootstrap support for H3AJ25 as seed ortholog is 100%.
Bootstrap support for H3GM11 as seed ortholog is 100%.

Group of orthologs #2228. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H3AFR6              	100.00%		H3GV26              	100.00%
Bootstrap support for H3AFR6 as seed ortholog is 100%.
Bootstrap support for H3GV26 as seed ortholog is 100%.

Group of orthologs #2229. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.ramorum:102

H3APX1              	100.00%		H3HDH5              	100.00%
Bootstrap support for H3APX1 as seed ortholog is 100%.
Bootstrap support for H3HDH5 as seed ortholog is 100%.

Group of orthologs #2230. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H2ZWY0              	100.00%		H3GHR4              	100.00%
H3B9H5              	28.07%		
M3XI85              	11.40%		
Bootstrap support for H2ZWY0 as seed ortholog is 100%.
Bootstrap support for H3GHR4 as seed ortholog is 100%.

Group of orthologs #2231. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3BBE6              	100.00%		H3GSJ8              	100.00%
H3A120              	29.51%		H3GIK8              	11.89%
Bootstrap support for H3BBE6 as seed ortholog is 100%.
Bootstrap support for H3GSJ8 as seed ortholog is 100%.

Group of orthologs #2232. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3BHC6              	100.00%		H3GS75              	100.00%
H3B3B1              	70.40%		
H3B3W6              	68.40%		
Bootstrap support for H3BHC6 as seed ortholog is 100%.
Bootstrap support for H3GS75 as seed ortholog is 100%.

Group of orthologs #2233. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3BAS4              	100.00%		H3H434              	100.00%
H3AW89              	45.03%		H3H056              	99.61%
Bootstrap support for H3BAS4 as seed ortholog is 100%.
Bootstrap support for H3H434 as seed ortholog is 100%.

Group of orthologs #2234. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H2ZUE7              	100.00%		H3H3T5              	100.00%
                    	       		H3H1V6              	31.95%
Bootstrap support for H2ZUE7 as seed ortholog is 100%.
Bootstrap support for H3H3T5 as seed ortholog is 100%.

Group of orthologs #2235. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:101

H3ABK2              	100.00%		H3HDS1              	100.00%
H3B4N4              	66.55%		
Bootstrap support for H3ABK2 as seed ortholog is 77%.
Bootstrap support for H3HDS1 as seed ortholog is 100%.

Group of orthologs #2236. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:49

H3BEK9              	100.00%		H3GM65              	100.00%
H3ANV8              	5.69%		
Bootstrap support for H3BEK9 as seed ortholog is 76%.
Bootstrap support for H3GM65 as seed ortholog is 94%.

Group of orthologs #2237. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3BDT2              	100.00%		H3GX45              	100.00%
H3ACG9              	50.95%		
Bootstrap support for H3BDT2 as seed ortholog is 100%.
Bootstrap support for H3GX45 as seed ortholog is 100%.

Group of orthologs #2238. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3AGN9              	100.00%		H3GIM4              	100.00%
Bootstrap support for H3AGN9 as seed ortholog is 100%.
Bootstrap support for H3GIM4 as seed ortholog is 100%.

Group of orthologs #2239. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3ANU4              	100.00%		H3GD83              	100.00%
Bootstrap support for H3ANU4 as seed ortholog is 100%.
Bootstrap support for H3GD83 as seed ortholog is 100%.

Group of orthologs #2240. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3AQI0              	100.00%		H3GE90              	100.00%
Bootstrap support for H3AQI0 as seed ortholog is 100%.
Bootstrap support for H3GE90 as seed ortholog is 100%.

Group of orthologs #2241. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H2ZRX4              	100.00%		H3HCN6              	100.00%
Bootstrap support for H2ZRX4 as seed ortholog is 100%.
Bootstrap support for H3HCN6 as seed ortholog is 100%.

Group of orthologs #2242. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3A5I7              	100.00%		H3HE29              	100.00%
Bootstrap support for H3A5I7 as seed ortholog is 100%.
Bootstrap support for H3HE29 as seed ortholog is 100%.

Group of orthologs #2243. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3B1K6              	100.00%		H3GPC3              	100.00%
Bootstrap support for H3B1K6 as seed ortholog is 100%.
Bootstrap support for H3GPC3 as seed ortholog is 100%.

Group of orthologs #2244. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

H3AGZ0              	100.00%		H3HCS3              	100.00%
Bootstrap support for H3AGZ0 as seed ortholog is 100%.
Bootstrap support for H3HCS3 as seed ortholog is 100%.

Group of orthologs #2245. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.ramorum:101

M3XI18              	100.00%		H3HCK3              	100.00%
Bootstrap support for M3XI18 as seed ortholog is 100%.
Bootstrap support for H3HCK3 as seed ortholog is 100%.

Group of orthologs #2246. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.ramorum:100

H3BAH1              	100.00%		H3GCT8              	100.00%
H3B393              	36.57%		H3GCT9              	41.51%
                    	       		H3GJ38              	26.68%
Bootstrap support for H3BAH1 as seed ortholog is 73%.
Alternative seed ortholog is M3XI75 (21 bits away from this cluster)
Bootstrap support for H3GCT8 as seed ortholog is 100%.

Group of orthologs #2247. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:100

H3B2K1              	100.00%		H3GY74              	100.00%
H3ACY5              	72.43%		
H3AI63              	65.99%		
Bootstrap support for H3B2K1 as seed ortholog is 100%.
Bootstrap support for H3GY74 as seed ortholog is 100%.

Group of orthologs #2248. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:100

H3AUD3              	100.00%		H3GZ53              	100.00%
H3AP45              	34.46%		
Bootstrap support for H3AUD3 as seed ortholog is 100%.
Bootstrap support for H3GZ53 as seed ortholog is 100%.

Group of orthologs #2249. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:100

H3A8Q6              	100.00%		H3GI31              	100.00%
Bootstrap support for H3A8Q6 as seed ortholog is 100%.
Bootstrap support for H3GI31 as seed ortholog is 100%.

Group of orthologs #2250. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:100

H3ADG6              	100.00%		H3GWJ9              	100.00%
Bootstrap support for H3ADG6 as seed ortholog is 100%.
Bootstrap support for H3GWJ9 as seed ortholog is 100%.

Group of orthologs #2251. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:11

H3A5U6              	100.00%		H3H3Q8              	100.00%
Bootstrap support for H3A5U6 as seed ortholog is 100%.
Bootstrap support for H3H3Q8 as seed ortholog is 55%.
Alternative seed ortholog is H3G6N9 (11 bits away from this cluster)

Group of orthologs #2252. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:100

H2ZZ08              	100.00%		H3HE26              	100.00%
Bootstrap support for H2ZZ08 as seed ortholog is 100%.
Bootstrap support for H3HE26 as seed ortholog is 100%.

Group of orthologs #2253. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:44

H3BGY0              	100.00%		H3GGT5              	100.00%
Bootstrap support for H3BGY0 as seed ortholog is 93%.
Bootstrap support for H3GGT5 as seed ortholog is 87%.

Group of orthologs #2254. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.ramorum:100

H3AJN1              	100.00%		H3HC69              	100.00%
Bootstrap support for H3AJN1 as seed ortholog is 100%.
Bootstrap support for H3HC69 as seed ortholog is 100%.

Group of orthologs #2255. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:99

H3AKC0              	100.00%		H3GVY5              	100.00%
H3AYM7              	100.00%		
H2ZYJ9              	17.15%		
Bootstrap support for H3AKC0 as seed ortholog is 100%.
Bootstrap support for H3AYM7 as seed ortholog is 100%.
Bootstrap support for H3GVY5 as seed ortholog is 100%.

Group of orthologs #2256. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:99

H2ZWX4              	100.00%		H3GZD8              	100.00%
                    	       		H3GL96              	22.17%
Bootstrap support for H2ZWX4 as seed ortholog is 52%.
Alternative seed ortholog is H3AY29 (3 bits away from this cluster)
Bootstrap support for H3GZD8 as seed ortholog is 100%.

Group of orthologs #2257. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:99

H3AWU6              	100.00%		H3GKG7              	100.00%
                    	       		H3GFU4              	26.18%
Bootstrap support for H3AWU6 as seed ortholog is 100%.
Bootstrap support for H3GKG7 as seed ortholog is 100%.

Group of orthologs #2258. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:99

H3B671              	100.00%		H3GI97              	100.00%
H3AT58              	54.25%		
Bootstrap support for H3B671 as seed ortholog is 100%.
Bootstrap support for H3GI97 as seed ortholog is 100%.

Group of orthologs #2259. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:99

H3A5H4              	100.00%		H3GLC6              	100.00%
Bootstrap support for H3A5H4 as seed ortholog is 100%.
Bootstrap support for H3GLC6 as seed ortholog is 100%.

Group of orthologs #2260. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:99

H3AK60              	100.00%		H3GDL3              	100.00%
Bootstrap support for H3AK60 as seed ortholog is 100%.
Bootstrap support for H3GDL3 as seed ortholog is 100%.

Group of orthologs #2261. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.ramorum:99

H3AVF5              	100.00%		H3G770              	100.00%
Bootstrap support for H3AVF5 as seed ortholog is 100%.
Bootstrap support for H3G770 as seed ortholog is 100%.

Group of orthologs #2262. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:9

H3A0Z1              	100.00%		H3HCB9              	100.00%
Bootstrap support for H3A0Z1 as seed ortholog is 86%.
Bootstrap support for H3HCB9 as seed ortholog is 61%.
Alternative seed ortholog is H3GKM5 (9 bits away from this cluster)

Group of orthologs #2263. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:16

H3B4Q4              	100.00%		H3HBS8              	100.00%
Bootstrap support for H3B4Q4 as seed ortholog is 82%.
Bootstrap support for H3HBS8 as seed ortholog is 80%.

Group of orthologs #2264. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.ramorum:98

H3BB34              	100.00%		H3GCL5              	100.00%
Bootstrap support for H3BB34 as seed ortholog is 100%.
Bootstrap support for H3GCL5 as seed ortholog is 100%.

Group of orthologs #2265. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.ramorum:98

H3B7J7              	100.00%		H3GG75              	100.00%
Bootstrap support for H3B7J7 as seed ortholog is 100%.
Bootstrap support for H3GG75 as seed ortholog is 100%.

Group of orthologs #2266. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.ramorum:98

H3A584              	100.00%		H3HE38              	100.00%
Bootstrap support for H3A584 as seed ortholog is 100%.
Bootstrap support for H3HE38 as seed ortholog is 100%.

Group of orthologs #2267. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:41

H3ALP8              	100.00%		H3GLT0              	100.00%
H3AT03              	40.67%		H3GLS9              	22.31%
H3BDR1              	5.97%		H3GTX6              	20.17%
                    	       		H3H0L7              	17.17%
                    	       		H3GIS4              	17.01%
                    	       		H3GQ40              	16.46%
                    	       		H3H2F8              	16.06%
                    	       		H3H2F6              	15.90%
                    	       		H3H2F3              	15.03%
                    	       		H3H2F7              	14.79%
                    	       		H3H2F5              	13.69%
                    	       		H3H2F9              	13.37%
                    	       		H3GJF2              	9.49%
                    	       		H3GU94              	7.12%
                    	       		H3GFI1              	5.46%
                    	       		H3GTX7              	5.06%
Bootstrap support for H3ALP8 as seed ortholog is 100%.
Bootstrap support for H3GLT0 as seed ortholog is 83%.

Group of orthologs #2268. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3B663              	100.00%		H3GVB5              	100.00%
H3BFQ1              	67.01%		H3GS39              	7.23%
H3B1G3              	61.17%		
H2ZSR9              	31.87%		
H3AE41              	13.06%		
H3B6H6              	10.65%		
Bootstrap support for H3B663 as seed ortholog is 100%.
Bootstrap support for H3GVB5 as seed ortholog is 100%.

Group of orthologs #2269. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3AQC2              	100.00%		H3GKD8              	100.00%
                    	       		H3GW91              	58.54%
Bootstrap support for H3AQC2 as seed ortholog is 100%.
Bootstrap support for H3GKD8 as seed ortholog is 100%.

Group of orthologs #2270. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3BEF3              	100.00%		H3G589              	100.00%
H3BBF8              	60.00%		
Bootstrap support for H3BEF3 as seed ortholog is 100%.
Bootstrap support for H3G589 as seed ortholog is 100%.

Group of orthologs #2271. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.ramorum:0

H3AWA0              	100.00%		H3GRI1              	100.00%
                    	       		H3H9P6              	45.94%
Bootstrap support for H3AWA0 as seed ortholog is 75%.
Bootstrap support for H3GRI1 as seed ortholog is 66%.
Alternative seed ortholog is H3GXH6 (0 bits away from this cluster)

Group of orthologs #2272. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3AD74              	100.00%		H3HAU8              	100.00%
                    	       		H3GDK5              	6.26%
Bootstrap support for H3AD74 as seed ortholog is 100%.
Bootstrap support for H3HAU8 as seed ortholog is 100%.

Group of orthologs #2273. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3BF37              	100.00%		H3GFG0              	100.00%
H3AC34              	56.73%		
Bootstrap support for H3BF37 as seed ortholog is 100%.
Bootstrap support for H3GFG0 as seed ortholog is 100%.

Group of orthologs #2274. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

M3XH05              	100.00%		H3HCX3              	100.00%
H3AMV7              	7.98%		
Bootstrap support for M3XH05 as seed ortholog is 100%.
Bootstrap support for H3HCX3 as seed ortholog is 100%.

Group of orthologs #2275. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.ramorum:54

H3A8K9              	100.00%		H3G7P4              	100.00%
Bootstrap support for H3A8K9 as seed ortholog is 74%.
Alternative seed ortholog is H3B695 (11 bits away from this cluster)
Bootstrap support for H3G7P4 as seed ortholog is 99%.

Group of orthologs #2276. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.ramorum:97

H3A641              	100.00%		H3GIE0              	100.00%
Bootstrap support for H3A641 as seed ortholog is 85%.
Bootstrap support for H3GIE0 as seed ortholog is 100%.

Group of orthologs #2277. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3A093              	100.00%		H3GRD9              	100.00%
Bootstrap support for H3A093 as seed ortholog is 100%.
Bootstrap support for H3GRD9 as seed ortholog is 100%.

Group of orthologs #2278. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3A4J3              	100.00%		H3GT07              	100.00%
Bootstrap support for H3A4J3 as seed ortholog is 100%.
Bootstrap support for H3GT07 as seed ortholog is 100%.

Group of orthologs #2279. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3B6D7              	100.00%		H3G7A3              	100.00%
Bootstrap support for H3B6D7 as seed ortholog is 100%.
Bootstrap support for H3G7A3 as seed ortholog is 100%.

Group of orthologs #2280. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3ATB1              	100.00%		H3GJ50              	100.00%
Bootstrap support for H3ATB1 as seed ortholog is 100%.
Bootstrap support for H3GJ50 as seed ortholog is 100%.

Group of orthologs #2281. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3AT96              	100.00%		H3GL78              	100.00%
Bootstrap support for H3AT96 as seed ortholog is 100%.
Bootstrap support for H3GL78 as seed ortholog is 100%.

Group of orthologs #2282. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3BEQ0              	100.00%		H3G549              	100.00%
Bootstrap support for H3BEQ0 as seed ortholog is 100%.
Bootstrap support for H3G549 as seed ortholog is 100%.

Group of orthologs #2283. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3BDH2              	100.00%		H3G844              	100.00%
Bootstrap support for H3BDH2 as seed ortholog is 100%.
Bootstrap support for H3G844 as seed ortholog is 100%.

Group of orthologs #2284. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3B8D5              	100.00%		H3GDB3              	100.00%
Bootstrap support for H3B8D5 as seed ortholog is 100%.
Bootstrap support for H3GDB3 as seed ortholog is 100%.

Group of orthologs #2285. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3B8Z0              	100.00%		H3GES7              	100.00%
Bootstrap support for H3B8Z0 as seed ortholog is 100%.
Bootstrap support for H3GES7 as seed ortholog is 100%.

Group of orthologs #2286. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3B149              	100.00%		H3GZT7              	100.00%
Bootstrap support for H3B149 as seed ortholog is 100%.
Bootstrap support for H3GZT7 as seed ortholog is 100%.

Group of orthologs #2287. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.ramorum:97

H3AVX1              	100.00%		H3H4Q6              	100.00%
Bootstrap support for H3AVX1 as seed ortholog is 100%.
Bootstrap support for H3H4Q6 as seed ortholog is 100%.

Group of orthologs #2288. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:96

H3AXC1              	53.95%		H3GYK7              	100.00%
H3A9V2              	100.00%		H3H5D5              	100.00%
H3ADD0              	34.88%		H3H8H7              	65.73%
Bootstrap support for H3A9V2 as seed ortholog is 100%.
Bootstrap support for H3GYK7 as seed ortholog is 100%.
Bootstrap support for H3H5D5 as seed ortholog is 100%.

Group of orthologs #2289. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.ramorum:13

H3A1V9              	100.00%		H3H273              	100.00%
H3BHH0              	67.21%		
H2ZYC0              	63.47%		
Bootstrap support for H3A1V9 as seed ortholog is 71%.
Alternative seed ortholog is H3AGV5 (17 bits away from this cluster)
Bootstrap support for H3H273 as seed ortholog is 69%.
Alternative seed ortholog is H3G511 (13 bits away from this cluster)

Group of orthologs #2290. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:96

H3AGB1              	100.00%		H3GVD0              	100.00%
H3BAD4              	47.09%		
Bootstrap support for H3AGB1 as seed ortholog is 100%.
Bootstrap support for H3GVD0 as seed ortholog is 100%.

Group of orthologs #2291. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:15

H3AG31              	100.00%		H3H0U6              	100.00%
H3B008              	54.37%		
Bootstrap support for H3AG31 as seed ortholog is 100%.
Bootstrap support for H3H0U6 as seed ortholog is 68%.
Alternative seed ortholog is H3H2C5 (15 bits away from this cluster)

Group of orthologs #2292. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:51

H2ZRX9              	100.00%		H3G5A0              	100.00%
Bootstrap support for H2ZRX9 as seed ortholog is 100%.
Bootstrap support for H3G5A0 as seed ortholog is 99%.

Group of orthologs #2293. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:96

H3A079              	100.00%		H3GLG1              	100.00%
Bootstrap support for H3A079 as seed ortholog is 100%.
Bootstrap support for H3GLG1 as seed ortholog is 100%.

Group of orthologs #2294. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:34

H3AUG6              	100.00%		H3GCF5              	100.00%
Bootstrap support for H3AUG6 as seed ortholog is 100%.
Bootstrap support for H3GCF5 as seed ortholog is 91%.

Group of orthologs #2295. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:96

H2ZRU3              	100.00%		H3HD08              	100.00%
Bootstrap support for H2ZRU3 as seed ortholog is 100%.
Bootstrap support for H3HD08 as seed ortholog is 100%.

Group of orthologs #2296. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:96

H3AIA8              	100.00%		H3GRS3              	100.00%
Bootstrap support for H3AIA8 as seed ortholog is 100%.
Bootstrap support for H3GRS3 as seed ortholog is 100%.

Group of orthologs #2297. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.ramorum:96

M3XLH2              	100.00%		H3GD70              	100.00%
Bootstrap support for M3XLH2 as seed ortholog is 100%.
Bootstrap support for H3GD70 as seed ortholog is 100%.

Group of orthologs #2298. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:96

H3AHB8              	100.00%		H3HCE6              	100.00%
Bootstrap support for H3AHB8 as seed ortholog is 95%.
Bootstrap support for H3HCE6 as seed ortholog is 100%.

Group of orthologs #2299. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:95

H3AGR2              	100.00%		H3HC13              	100.00%
H3AVR9              	76.84%		
H3AN42              	67.79%		
H3BB65              	56.00%		
Bootstrap support for H3AGR2 as seed ortholog is 100%.
Bootstrap support for H3HC13 as seed ortholog is 100%.

Group of orthologs #2300. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:95

H3AMV9              	100.00%		H3GM60              	100.00%
                    	       		H3H010              	23.98%
Bootstrap support for H3AMV9 as seed ortholog is 100%.
Bootstrap support for H3GM60 as seed ortholog is 100%.

Group of orthologs #2301. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:95

H3APQ3              	100.00%		H3G7V9              	100.00%
Bootstrap support for H3APQ3 as seed ortholog is 100%.
Bootstrap support for H3G7V9 as seed ortholog is 100%.

Group of orthologs #2302. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:95

H3ATQ2              	100.00%		H3GIY3              	100.00%
Bootstrap support for H3ATQ2 as seed ortholog is 100%.
Bootstrap support for H3GIY3 as seed ortholog is 100%.

Group of orthologs #2303. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:95

H3B380              	100.00%		H3GLB8              	100.00%
Bootstrap support for H3B380 as seed ortholog is 100%.
Bootstrap support for H3GLB8 as seed ortholog is 100%.

Group of orthologs #2304. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.ramorum:95

M3XJ90              	100.00%		H3GMQ1              	100.00%
Bootstrap support for M3XJ90 as seed ortholog is 100%.
Bootstrap support for H3GMQ1 as seed ortholog is 100%.

Group of orthologs #2305. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:94

H3ADM0              	100.00%		H3G9S0              	100.00%
H2ZVU8              	20.20%		H3GZI5              	16.42%
                    	       		H3H5I1              	16.42%
Bootstrap support for H3ADM0 as seed ortholog is 100%.
Bootstrap support for H3G9S0 as seed ortholog is 100%.

Group of orthologs #2306. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:94

H3A622              	100.00%		H3G550              	100.00%
M3XGL7              	56.16%		
Bootstrap support for H3A622 as seed ortholog is 100%.
Bootstrap support for H3G550 as seed ortholog is 100%.

Group of orthologs #2307. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:4

H2ZRU6              	100.00%		H3GVQ3              	100.00%
Bootstrap support for H2ZRU6 as seed ortholog is 100%.
Bootstrap support for H3GVQ3 as seed ortholog is 60%.
Alternative seed ortholog is H3G8S4 (4 bits away from this cluster)

Group of orthologs #2308. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:94

H3AUE4              	100.00%		H3GXR6              	100.00%
Bootstrap support for H3AUE4 as seed ortholog is 100%.
Bootstrap support for H3GXR6 as seed ortholog is 100%.

Group of orthologs #2309. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.ramorum:44

M3XIR7              	100.00%		H3GHM4              	100.00%
Bootstrap support for M3XIR7 as seed ortholog is 100%.
Bootstrap support for H3GHM4 as seed ortholog is 93%.

Group of orthologs #2310. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.ramorum:9

H2ZTL0              	100.00%		H3H405              	100.00%
H3APU4              	37.22%		H3H7F8              	62.80%
H2ZT72              	20.56%		H3GZA0              	44.35%
H3AA81              	17.04%		H3H5Q3              	37.20%
H3AJ26              	12.22%		H3G837              	29.76%
H2ZRT1              	9.81%		H3G7D2              	29.17%
                    	       		H3G653              	27.98%
                    	       		H3G7H4              	27.68%
                    	       		H3G5T6              	26.19%
                    	       		H3GAZ9              	25.30%
                    	       		H3G6A5              	22.32%
                    	       		H3G6V2              	22.32%
                    	       		H3G6H7              	22.32%
                    	       		H3G5B3              	22.02%
                    	       		H3G6K3              	19.05%
                    	       		H3G5Q5              	18.75%
                    	       		H3G7I1              	17.26%
                    	       		H3G7P7              	17.26%
                    	       		H3G652              	16.96%
                    	       		H3G6G0              	16.96%
                    	       		H3G516              	15.48%
                    	       		H3G5Q4              	15.48%
                    	       		H3G5J7              	12.80%
                    	       		H3G753              	12.20%
Bootstrap support for H2ZTL0 as seed ortholog is 59%.
Alternative seed ortholog is H2ZTA9 (8 bits away from this cluster)
Bootstrap support for H3H405 as seed ortholog is 61%.
Alternative seed ortholog is H3GA32 (9 bits away from this cluster)

Group of orthologs #2311. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.ramorum:93

H3A2G7              	100.00%		H3GP02              	100.00%
Bootstrap support for H3A2G7 as seed ortholog is 100%.
Bootstrap support for H3GP02 as seed ortholog is 100%.

Group of orthologs #2312. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.ramorum:93

H3AQ49              	100.00%		H3GD60              	100.00%
Bootstrap support for H3AQ49 as seed ortholog is 100%.
Bootstrap support for H3GD60 as seed ortholog is 100%.

Group of orthologs #2313. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.ramorum:93

H3APL2              	100.00%		H3GGC5              	100.00%
Bootstrap support for H3APL2 as seed ortholog is 100%.
Bootstrap support for H3GGC5 as seed ortholog is 100%.

Group of orthologs #2314. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.ramorum:93

H3A3W0              	100.00%		H3GZK0              	100.00%
Bootstrap support for H3A3W0 as seed ortholog is 100%.
Bootstrap support for H3GZK0 as seed ortholog is 100%.

Group of orthologs #2315. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.ramorum:93

H3AH74              	100.00%		H3H257              	100.00%
Bootstrap support for H3AH74 as seed ortholog is 100%.
Bootstrap support for H3H257 as seed ortholog is 100%.

Group of orthologs #2316. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.ramorum:93

H3BF04              	100.00%		H3GSG3              	100.00%
Bootstrap support for H3BF04 as seed ortholog is 100%.
Bootstrap support for H3GSG3 as seed ortholog is 100%.

Group of orthologs #2317. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.ramorum:92

H3AAV2              	100.00%		H3H1G0              	100.00%
H3AP04              	25.08%		H3H8P9              	78.06%
H3APM2              	24.61%		H3GDE0              	48.94%
                    	       		H3GBB5              	7.71%
                    	       		H3GCT7              	7.05%
Bootstrap support for H3AAV2 as seed ortholog is 56%.
Alternative seed ortholog is H3BB61 (1 bits away from this cluster)
Bootstrap support for H3H1G0 as seed ortholog is 100%.

Group of orthologs #2318. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3AMZ8              	100.00%		H3GV95              	100.00%
                    	       		H3H5R1              	12.00%
                    	       		H3H887              	5.61%
Bootstrap support for H3AMZ8 as seed ortholog is 100%.
Bootstrap support for H3GV95 as seed ortholog is 100%.

Group of orthologs #2319. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

M3XKW9              	100.00%		H3GE96              	100.00%
                    	       		H3GE95              	52.32%
                    	       		H3HB55              	29.14%
Bootstrap support for M3XKW9 as seed ortholog is 100%.
Bootstrap support for H3GE96 as seed ortholog is 100%.

Group of orthologs #2320. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

M3XJA3              	100.00%		H3GPH7              	100.00%
H3BAW3              	27.65%		
Bootstrap support for M3XJA3 as seed ortholog is 100%.
Bootstrap support for H3GPH7 as seed ortholog is 100%.

Group of orthologs #2321. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3BE62              	100.00%		H3HAQ1              	100.00%
H3ADC8              	27.06%		
Bootstrap support for H3BE62 as seed ortholog is 100%.
Bootstrap support for H3HAQ1 as seed ortholog is 100%.

Group of orthologs #2322. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H2ZSZ9              	100.00%		H3G7H6              	100.00%
Bootstrap support for H2ZSZ9 as seed ortholog is 100%.
Bootstrap support for H3G7H6 as seed ortholog is 100%.

Group of orthologs #2323. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3ADD5              	100.00%		H3GED1              	100.00%
Bootstrap support for H3ADD5 as seed ortholog is 100%.
Bootstrap support for H3GED1 as seed ortholog is 100%.

Group of orthologs #2324. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3B708              	100.00%		H3GCZ9              	100.00%
Bootstrap support for H3B708 as seed ortholog is 100%.
Bootstrap support for H3GCZ9 as seed ortholog is 100%.

Group of orthologs #2325. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3AFW2              	100.00%		H3H3B8              	100.00%
Bootstrap support for H3AFW2 as seed ortholog is 100%.
Bootstrap support for H3H3B8 as seed ortholog is 100%.

Group of orthologs #2326. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3AMC5              	100.00%		H3HAU0              	100.00%
Bootstrap support for H3AMC5 as seed ortholog is 100%.
Bootstrap support for H3HAU0 as seed ortholog is 100%.

Group of orthologs #2327. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.ramorum:92

H3BHQ2              	100.00%		H3GKZ6              	100.00%
Bootstrap support for H3BHQ2 as seed ortholog is 100%.
Bootstrap support for H3GKZ6 as seed ortholog is 100%.

Group of orthologs #2328. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.ramorum:17

H3AUR0              	100.00%		H3HEC7              	100.00%
H2ZWT1              	61.20%		
H3A0M0              	45.11%		
Bootstrap support for H3AUR0 as seed ortholog is 69%.
Alternative seed ortholog is H3AGV5 (11 bits away from this cluster)
Bootstrap support for H3HEC7 as seed ortholog is 78%.

Group of orthologs #2329. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:91

H3AZW8              	100.00%		H3GE97              	100.00%
Bootstrap support for H3AZW8 as seed ortholog is 100%.
Bootstrap support for H3GE97 as seed ortholog is 100%.

Group of orthologs #2330. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:91

H3A9C4              	100.00%		H3HBD4              	100.00%
Bootstrap support for H3A9C4 as seed ortholog is 100%.
Bootstrap support for H3HBD4 as seed ortholog is 100%.

Group of orthologs #2331. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:91

H3ASF6              	100.00%		H3H0I0              	100.00%
Bootstrap support for H3ASF6 as seed ortholog is 100%.
Bootstrap support for H3H0I0 as seed ortholog is 100%.

Group of orthologs #2332. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:91

H3B397              	100.00%		H3GVP7              	100.00%
Bootstrap support for H3B397 as seed ortholog is 55%.
Alternative seed ortholog is H3B6I1 (40 bits away from this cluster)
Bootstrap support for H3GVP7 as seed ortholog is 100%.

Group of orthologs #2333. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:91

H3BAA3              	100.00%		H3H0L3              	100.00%
Bootstrap support for H3BAA3 as seed ortholog is 100%.
Bootstrap support for H3H0L3 as seed ortholog is 100%.

Group of orthologs #2334. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:91

H3AZM0              	100.00%		H3HBI3              	100.00%
Bootstrap support for H3AZM0 as seed ortholog is 100%.
Bootstrap support for H3HBI3 as seed ortholog is 100%.

Group of orthologs #2335. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.ramorum:91

H3BA54              	100.00%		H3HDA8              	100.00%
Bootstrap support for H3BA54 as seed ortholog is 100%.
Bootstrap support for H3HDA8 as seed ortholog is 100%.

Group of orthologs #2336. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3APN0              	100.00%		H3GBW0              	100.00%
H3AM34              	80.22%		
H3AT94              	55.47%		
H3AS13              	37.02%		
H3AF76              	29.28%		
H3ANT2              	26.19%		
H3B1Z3              	15.80%		
H2ZSH7              	8.84%		
Bootstrap support for H3APN0 as seed ortholog is 100%.
Bootstrap support for H3GBW0 as seed ortholog is 100%.

Group of orthologs #2337. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3B733              	100.00%		H3GPF3              	100.00%
H2ZYP5              	44.66%		
H3BE84              	40.00%		
Bootstrap support for H3B733 as seed ortholog is 100%.
Bootstrap support for H3GPF3 as seed ortholog is 100%.

Group of orthologs #2338. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3AUW9              	100.00%		H3H2G6              	100.00%
H3ATU4              	58.91%		
Bootstrap support for H3AUW9 as seed ortholog is 100%.
Bootstrap support for H3H2G6 as seed ortholog is 100%.

Group of orthologs #2339. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3AKA0              	100.00%		H3G5I2              	100.00%
Bootstrap support for H3AKA0 as seed ortholog is 100%.
Bootstrap support for H3G5I2 as seed ortholog is 100%.

Group of orthologs #2340. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3A8W3              	100.00%		H3GWZ0              	100.00%
Bootstrap support for H3A8W3 as seed ortholog is 100%.
Bootstrap support for H3GWZ0 as seed ortholog is 100%.

Group of orthologs #2341. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3B5P1              	100.00%		H3G707              	100.00%
Bootstrap support for H3B5P1 as seed ortholog is 100%.
Bootstrap support for H3G707 as seed ortholog is 100%.

Group of orthologs #2342. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3BIG9              	100.00%		H3GG13              	100.00%
Bootstrap support for H3BIG9 as seed ortholog is 100%.
Bootstrap support for H3GG13 as seed ortholog is 100%.

Group of orthologs #2343. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3BEQ8              	100.00%		H3GXE3              	100.00%
Bootstrap support for H3BEQ8 as seed ortholog is 100%.
Bootstrap support for H3GXE3 as seed ortholog is 100%.

Group of orthologs #2344. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.ramorum:90

H3BG84              	100.00%		H3H1I5              	100.00%
Bootstrap support for H3BG84 as seed ortholog is 100%.
Bootstrap support for H3H1I5 as seed ortholog is 100%.

Group of orthologs #2345. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:89

H3ADB0              	100.00%		H3GHW9              	100.00%
M3XK04              	100.00%		H3G8S9              	100.00%
H3A2V4              	18.38%		
Bootstrap support for H3ADB0 as seed ortholog is 100%.
Bootstrap support for M3XK04 as seed ortholog is 100%.
Bootstrap support for H3GHW9 as seed ortholog is 100%.
Bootstrap support for H3G8S9 as seed ortholog is 100%.

Group of orthologs #2346. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:20

H2ZSY8              	100.00%		H3GBT3              	100.00%
H3AAA2              	46.70%		H3H1E8              	50.57%
Bootstrap support for H2ZSY8 as seed ortholog is 87%.
Bootstrap support for H3GBT3 as seed ortholog is 74%.
Alternative seed ortholog is H3GFI6 (20 bits away from this cluster)

Group of orthologs #2347. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:89

H3AQM9              	100.00%		H3GGT7              	100.00%
Bootstrap support for H3AQM9 as seed ortholog is 100%.
Bootstrap support for H3GGT7 as seed ortholog is 100%.

Group of orthologs #2348. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:89

H3B7B0              	100.00%		H3GV62              	100.00%
Bootstrap support for H3B7B0 as seed ortholog is 100%.
Bootstrap support for H3GV62 as seed ortholog is 100%.

Group of orthologs #2349. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:89

H3BBA4              	100.00%		H3GYP6              	100.00%
Bootstrap support for H3BBA4 as seed ortholog is 100%.
Bootstrap support for H3GYP6 as seed ortholog is 100%.

Group of orthologs #2350. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.ramorum:89

H3BAR7              	100.00%		H3GZL3              	100.00%
Bootstrap support for H3BAR7 as seed ortholog is 100%.
Bootstrap support for H3GZL3 as seed ortholog is 100%.

Group of orthologs #2351. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3A273              	100.00%		H3GWE4              	100.00%
                    	       		H3GFS4              	56.72%
                    	       		H3GFS5              	54.06%
                    	       		H3GFS6              	53.91%
                    	       		H3GRY6              	53.91%
                    	       		H3GXR9              	50.16%
                    	       		H3GN42              	36.09%
                    	       		H3GHW3              	34.84%
                    	       		H3H463              	26.41%
                    	       		H3H464              	25.47%
                    	       		H3GF99              	21.41%
                    	       		H3H465              	18.75%
Bootstrap support for H3A273 as seed ortholog is 100%.
Bootstrap support for H3GWE4 as seed ortholog is 100%.

Group of orthologs #2352. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:37

H3AIL2              	100.00%		H3GIJ0              	100.00%
                    	       		H3GTD0              	28.62%
                    	       		H3GT88              	16.55%
                    	       		H3GT89              	14.83%
Bootstrap support for H3AIL2 as seed ortholog is 100%.
Bootstrap support for H3GIJ0 as seed ortholog is 93%.

Group of orthologs #2353. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3A7Z2              	100.00%		H3GBN0              	100.00%
H3AGF9              	50.60%		
H3A362              	20.48%		
Bootstrap support for H3A7Z2 as seed ortholog is 100%.
Bootstrap support for H3GBN0 as seed ortholog is 100%.

Group of orthologs #2354. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.ramorum:16

H3ARH1              	100.00%		H3GCH5              	100.00%
H3AUF7              	29.94%		
Bootstrap support for H3ARH1 as seed ortholog is 49%.
Alternative seed ortholog is H3BIR7 (1 bits away from this cluster)
Bootstrap support for H3GCH5 as seed ortholog is 75%.

Group of orthologs #2355. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AD12              	100.00%		H3GQI4              	100.00%
                    	       		H3GQI8              	99.77%
Bootstrap support for H3AD12 as seed ortholog is 100%.
Bootstrap support for H3GQI4 as seed ortholog is 100%.

Group of orthologs #2356. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.ramorum:88

H3AAF6              	100.00%		H3GVH4              	100.00%
H3ARH6              	47.10%		
Bootstrap support for H3AAF6 as seed ortholog is 89%.
Bootstrap support for H3GVH4 as seed ortholog is 100%.

Group of orthologs #2357. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AD65              	100.00%		H3GA31              	100.00%
Bootstrap support for H3AD65 as seed ortholog is 100%.
Bootstrap support for H3GA31 as seed ortholog is 100%.

Group of orthologs #2358. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AAA8              	100.00%		H3GI65              	100.00%
Bootstrap support for H3AAA8 as seed ortholog is 100%.
Bootstrap support for H3GI65 as seed ortholog is 100%.

Group of orthologs #2359. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:11

H2ZRY0              	100.00%		H3H395              	100.00%
Bootstrap support for H2ZRY0 as seed ortholog is 100%.
Bootstrap support for H3H395 as seed ortholog is 53%.
Alternative seed ortholog is H3GHF4 (11 bits away from this cluster)

Group of orthologs #2360. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AAX4              	100.00%		H3GV49              	100.00%
Bootstrap support for H3AAX4 as seed ortholog is 100%.
Bootstrap support for H3GV49 as seed ortholog is 100%.

Group of orthologs #2361. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AS06              	100.00%		H3GH42              	100.00%
Bootstrap support for H3AS06 as seed ortholog is 100%.
Bootstrap support for H3GH42 as seed ortholog is 100%.

Group of orthologs #2362. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AY33              	100.00%		H3GID9              	100.00%
Bootstrap support for H3AY33 as seed ortholog is 100%.
Bootstrap support for H3GID9 as seed ortholog is 100%.

Group of orthologs #2363. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:27

H3ARR6              	100.00%		H3GRW3              	100.00%
Bootstrap support for H3ARR6 as seed ortholog is 100%.
Bootstrap support for H3GRW3 as seed ortholog is 61%.
Alternative seed ortholog is H3GKF9 (27 bits away from this cluster)

Group of orthologs #2364. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AI59              	100.00%		H3GZV8              	100.00%
Bootstrap support for H3AI59 as seed ortholog is 100%.
Bootstrap support for H3GZV8 as seed ortholog is 100%.

Group of orthologs #2365. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.ramorum:88

H3AY28              	100.00%		H3H241              	100.00%
Bootstrap support for H3AY28 as seed ortholog is 100%.
Bootstrap support for H3H241 as seed ortholog is 100%.

Group of orthologs #2366. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

H3ASX1              	100.00%		H3H7K3              	100.00%
H3B0K4              	100.00%		H3H086              	100.00%
H3AAZ2              	28.86%		H3GLU6              	20.90%
H3AD91              	28.18%		
H3A8Z7              	27.60%		
H3BI29              	24.62%		
H3B1U7              	23.60%		
H3AK83              	21.73%		
H3AL99              	21.22%		
H3AK50              	16.64%		
H3BFX1              	16.30%		
H3B2U6              	16.13%		
H3BEN9              	15.28%		
H3BF05              	14.09%		
H3A8P2              	13.92%		
H3BIJ8              	13.92%		
H3AI57              	13.24%		
H2ZSR2              	12.90%		
H3B481              	12.59%		
H3BFN9              	11.54%		
H3ASC7              	9.93%		
H3A3A9              	9.85%		
H3B1P1              	8.83%		
Bootstrap support for H3ASX1 as seed ortholog is 100%.
Bootstrap support for H3B0K4 as seed ortholog is 100%.
Bootstrap support for H3H7K3 as seed ortholog is 100%.
Bootstrap support for H3H086 as seed ortholog is 100%.

Group of orthologs #2367. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

H3A4F1              	100.00%		H3HB83              	100.00%
H3B6L1              	7.81%		
H3AJW6              	7.36%		
H3AS37              	7.06%		
H3ADV4              	6.31%		
Bootstrap support for H3A4F1 as seed ortholog is 100%.
Bootstrap support for H3HB83 as seed ortholog is 100%.

Group of orthologs #2368. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

H3B2P0              	100.00%		H3H4T8              	100.00%
H3AJZ2              	53.89%		H3GAY5              	88.39%
Bootstrap support for H3B2P0 as seed ortholog is 100%.
Bootstrap support for H3H4T8 as seed ortholog is 100%.

Group of orthologs #2369. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

H3B9J4              	100.00%		H3GUQ9              	100.00%
                    	       		H3H6J8              	100.00%
Bootstrap support for H3B9J4 as seed ortholog is 100%.
Bootstrap support for H3GUQ9 as seed ortholog is 100%.
Bootstrap support for H3H6J8 as seed ortholog is 100%.

Group of orthologs #2370. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

H3AEC3              	100.00%		H3GLW8              	100.00%
Bootstrap support for H3AEC3 as seed ortholog is 100%.
Bootstrap support for H3GLW8 as seed ortholog is 100%.

Group of orthologs #2371. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

H3AGD9              	100.00%		H3HB95              	100.00%
Bootstrap support for H3AGD9 as seed ortholog is 100%.
Bootstrap support for H3HB95 as seed ortholog is 100%.

Group of orthologs #2372. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:87

M3XKX3              	100.00%		H3GYT8              	100.00%
Bootstrap support for M3XKX3 as seed ortholog is 100%.
Bootstrap support for H3GYT8 as seed ortholog is 100%.

Group of orthologs #2373. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.ramorum:38

H3BED0              	100.00%		H3HAR8              	100.00%
Bootstrap support for H3BED0 as seed ortholog is 100%.
Bootstrap support for H3HAR8 as seed ortholog is 97%.

Group of orthologs #2374. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3AQS9              	100.00%		H3GQ37              	100.00%
H3AAZ9              	12.64%		H3H7U7              	29.00%
H3APN5              	11.75%		
Bootstrap support for H3AQS9 as seed ortholog is 100%.
Bootstrap support for H3GQ37 as seed ortholog is 100%.

Group of orthologs #2375. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:29

H3AZK4              	100.00%		H3GSF4              	100.00%
M3XJK8              	23.63%		
H3APY6              	19.47%		
Bootstrap support for H3AZK4 as seed ortholog is 100%.
Bootstrap support for H3GSF4 as seed ortholog is 94%.

Group of orthologs #2376. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3A3J2              	100.00%		H3GH53              	100.00%
Bootstrap support for H3A3J2 as seed ortholog is 100%.
Bootstrap support for H3GH53 as seed ortholog is 100%.

Group of orthologs #2377. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3A014              	100.00%		H3GSY2              	100.00%
Bootstrap support for H3A014 as seed ortholog is 100%.
Bootstrap support for H3GSY2 as seed ortholog is 100%.

Group of orthologs #2378. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3B701              	100.00%		H3G8A3              	100.00%
Bootstrap support for H3B701 as seed ortholog is 100%.
Bootstrap support for H3G8A3 as seed ortholog is 100%.

Group of orthologs #2379. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3AIG5              	100.00%		H3GV84              	100.00%
Bootstrap support for H3AIG5 as seed ortholog is 100%.
Bootstrap support for H3GV84 as seed ortholog is 100%.

Group of orthologs #2380. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

M3XI51              	100.00%		H3G671              	100.00%
Bootstrap support for M3XI51 as seed ortholog is 100%.
Bootstrap support for H3G671 as seed ortholog is 100%.

Group of orthologs #2381. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3BIR9              	100.00%		H3G8J2              	100.00%
Bootstrap support for H3BIR9 as seed ortholog is 100%.
Bootstrap support for H3G8J2 as seed ortholog is 100%.

Group of orthologs #2382. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3BAI4              	100.00%		H3GIW8              	100.00%
Bootstrap support for H3BAI4 as seed ortholog is 100%.
Bootstrap support for H3GIW8 as seed ortholog is 100%.

Group of orthologs #2383. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.ramorum:86

H3BH15              	100.00%		H3GXI5              	100.00%
Bootstrap support for H3BH15 as seed ortholog is 100%.
Bootstrap support for H3GXI5 as seed ortholog is 100%.

Group of orthologs #2384. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3A8J9              	100.00%		H3GHQ1              	100.00%
H3ANU8              	78.49%		
H3B7C1              	73.29%		
H3A8M5              	51.93%		
H3BFJ7              	32.79%		
H3AG47              	31.31%		
H3AWF7              	29.67%		
H3AMZ7              	29.38%		
H3A4S6              	21.07%		
H3B026              	21.07%		
H3AIN2              	19.88%		
H3A4G7              	14.99%		
H2ZW60              	12.31%		
H3A9P4              	10.09%		
H3BGQ4              	8.75%		
H3BFP4              	6.97%		
H3A7K0              	5.49%		
Bootstrap support for H3A8J9 as seed ortholog is 100%.
Bootstrap support for H3GHQ1 as seed ortholog is 100%.

Group of orthologs #2385. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:9

M3XK74              	100.00%		H3H785              	100.00%
                    	       		H3H5X0              	49.11%
                    	       		H3GT65              	24.73%
                    	       		H3GLY6              	24.52%
                    	       		H3H3G5              	21.94%
                    	       		H3GLY7              	21.44%
                    	       		H3H417              	17.73%
                    	       		H3GZJ6              	13.58%
                    	       		H3GE25              	11.87%
                    	       		H3H786              	10.65%
                    	       		H3GSL0              	9.22%
Bootstrap support for M3XK74 as seed ortholog is 100%.
Bootstrap support for H3H785 as seed ortholog is 65%.
Alternative seed ortholog is H3GEE4 (9 bits away from this cluster)

Group of orthologs #2386. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3AHM8              	100.00%		H3GZX3              	100.00%
H2ZVZ6              	16.78%		
H3BB08              	16.78%		
H3A5E0              	15.12%		
Bootstrap support for H3AHM8 as seed ortholog is 100%.
Bootstrap support for H3GZX3 as seed ortholog is 100%.

Group of orthologs #2387. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H2ZU99              	100.00%		H3GDM5              	100.00%
H3ACP1              	25.59%		
Bootstrap support for H2ZU99 as seed ortholog is 100%.
Bootstrap support for H3GDM5 as seed ortholog is 100%.

Group of orthologs #2388. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3A7S1              	100.00%		H3GR64              	100.00%
Bootstrap support for H3A7S1 as seed ortholog is 100%.
Bootstrap support for H3GR64 as seed ortholog is 100%.

Group of orthologs #2389. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3AR98              	100.00%		H3GTZ4              	100.00%
Bootstrap support for H3AR98 as seed ortholog is 100%.
Bootstrap support for H3GTZ4 as seed ortholog is 100%.

Group of orthologs #2390. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3ATT9              	100.00%		H3GVK1              	100.00%
Bootstrap support for H3ATT9 as seed ortholog is 100%.
Bootstrap support for H3GVK1 as seed ortholog is 100%.

Group of orthologs #2391. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3B8W7              	100.00%		H3GIB5              	100.00%
Bootstrap support for H3B8W7 as seed ortholog is 100%.
Bootstrap support for H3GIB5 as seed ortholog is 100%.

Group of orthologs #2392. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.ramorum:85

H3AYN9              	100.00%		H3H0E6              	100.00%
Bootstrap support for H3AYN9 as seed ortholog is 100%.
Bootstrap support for H3H0E6 as seed ortholog is 100%.

Group of orthologs #2393. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:11

H3A9F7              	100.00%		H3H3B2              	100.00%
H3AN21              	16.35%		
Bootstrap support for H3A9F7 as seed ortholog is 100%.
Bootstrap support for H3H3B2 as seed ortholog is 40%.
Alternative seed ortholog is H3H460 (11 bits away from this cluster)

Group of orthologs #2394. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3A0F6              	100.00%		H3G7J4              	100.00%
Bootstrap support for H3A0F6 as seed ortholog is 100%.
Bootstrap support for H3G7J4 as seed ortholog is 100%.

Group of orthologs #2395. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3A8I0              	100.00%		H3G8R6              	100.00%
Bootstrap support for H3A8I0 as seed ortholog is 100%.
Bootstrap support for H3G8R6 as seed ortholog is 100%.

Group of orthologs #2396. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H2ZVK4              	100.00%		H3GM41              	100.00%
Bootstrap support for H2ZVK4 as seed ortholog is 100%.
Bootstrap support for H3GM41 as seed ortholog is 100%.

Group of orthologs #2397. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3A2U1              	100.00%		H3GTM2              	100.00%
Bootstrap support for H3A2U1 as seed ortholog is 100%.
Bootstrap support for H3GTM2 as seed ortholog is 100%.

Group of orthologs #2398. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H2ZX43              	100.00%		H3H327              	100.00%
Bootstrap support for H2ZX43 as seed ortholog is 100%.
Bootstrap support for H3H327 as seed ortholog is 100%.

Group of orthologs #2399. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3APX0              	100.00%		H3GFF4              	100.00%
Bootstrap support for H3APX0 as seed ortholog is 100%.
Bootstrap support for H3GFF4 as seed ortholog is 100%.

Group of orthologs #2400. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3AAH0              	100.00%		H3GTT9              	100.00%
Bootstrap support for H3AAH0 as seed ortholog is 100%.
Bootstrap support for H3GTT9 as seed ortholog is 100%.

Group of orthologs #2401. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3AA39              	100.00%		H3H2M3              	100.00%
Bootstrap support for H3AA39 as seed ortholog is 100%.
Bootstrap support for H3H2M3 as seed ortholog is 100%.

Group of orthologs #2402. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3A2U4              	100.00%		H3HD07              	100.00%
Bootstrap support for H3A2U4 as seed ortholog is 100%.
Bootstrap support for H3HD07 as seed ortholog is 100%.

Group of orthologs #2403. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3BCJ8              	100.00%		H3GHD4              	100.00%
Bootstrap support for H3BCJ8 as seed ortholog is 100%.
Bootstrap support for H3GHD4 as seed ortholog is 100%.

Group of orthologs #2404. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

M3XHD5              	100.00%		H3GVS9              	100.00%
Bootstrap support for M3XHD5 as seed ortholog is 100%.
Bootstrap support for H3GVS9 as seed ortholog is 100%.

Group of orthologs #2405. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.ramorum:84

H3BF60              	100.00%		H3HB66              	100.00%
Bootstrap support for H3BF60 as seed ortholog is 100%.
Bootstrap support for H3HB66 as seed ortholog is 100%.

Group of orthologs #2406. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.ramorum:35

H3B7S6              	100.00%		H3GI89              	100.00%
H3B7M2              	65.02%		H3GI92              	50.41%
                    	       		H3H3K3              	39.18%
                    	       		H3H3K4              	39.18%
                    	       		H3GI90              	32.04%
                    	       		H3GI91              	30.20%
                    	       		H3GL11              	13.47%
Bootstrap support for H3B7S6 as seed ortholog is 100%.
Bootstrap support for H3GI89 as seed ortholog is 73%.
Alternative seed ortholog is H3GZN4 (35 bits away from this cluster)

Group of orthologs #2407. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.ramorum:9

H3BC02              	100.00%		H3H2J6              	100.00%
H3AZX2              	11.01%		
H3A0P5              	6.25%		
Bootstrap support for H3BC02 as seed ortholog is 91%.
Bootstrap support for H3H2J6 as seed ortholog is 66%.
Alternative seed ortholog is H3GT52 (9 bits away from this cluster)

Group of orthologs #2408. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.ramorum:83

H3A0G3              	100.00%		H3GTW7              	100.00%
H3A6N4              	34.05%		
Bootstrap support for H3A0G3 as seed ortholog is 100%.
Bootstrap support for H3GTW7 as seed ortholog is 100%.

Group of orthologs #2409. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.ramorum:83

H2ZTX7              	100.00%		H3GAV5              	100.00%
Bootstrap support for H2ZTX7 as seed ortholog is 100%.
Bootstrap support for H3GAV5 as seed ortholog is 100%.

Group of orthologs #2410. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.ramorum:83

H3AJV4              	100.00%		H3GDW5              	100.00%
Bootstrap support for H3AJV4 as seed ortholog is 100%.
Bootstrap support for H3GDW5 as seed ortholog is 100%.

Group of orthologs #2411. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H2ZWF5              	100.00%		H3GS72              	100.00%
H3ATI3              	100.00%		
H3AN66              	38.94%		
H3BHG9              	36.59%		
H3ALB7              	31.03%		
Bootstrap support for H2ZWF5 as seed ortholog is 100%.
Bootstrap support for H3ATI3 as seed ortholog is 100%.
Bootstrap support for H3GS72 as seed ortholog is 100%.

Group of orthologs #2412. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

M3XKF0              	100.00%		H3GTF3              	100.00%
M3XJB1              	31.49%		
H3BHK7              	24.03%		
H3BGY9              	19.70%		
Bootstrap support for M3XKF0 as seed ortholog is 100%.
Bootstrap support for H3GTF3 as seed ortholog is 100%.

Group of orthologs #2413. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3AXH9              	100.00%		H3GGS5              	100.00%
H3B2A6              	97.86%		H3GIY1              	16.98%
Bootstrap support for H3AXH9 as seed ortholog is 100%.
Bootstrap support for H3GGS5 as seed ortholog is 100%.

Group of orthologs #2414. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3B1F2              	100.00%		H3H7R0              	100.00%
H3A0P0              	49.02%		
M3XHL9              	17.61%		
Bootstrap support for H3B1F2 as seed ortholog is 100%.
Bootstrap support for H3H7R0 as seed ortholog is 100%.

Group of orthologs #2415. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3AI50              	100.00%		H3G5D0              	100.00%
Bootstrap support for H3AI50 as seed ortholog is 100%.
Bootstrap support for H3G5D0 as seed ortholog is 100%.

Group of orthologs #2416. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3AKZ4              	100.00%		H3G7M4              	100.00%
Bootstrap support for H3AKZ4 as seed ortholog is 100%.
Bootstrap support for H3G7M4 as seed ortholog is 100%.

Group of orthologs #2417. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3B3A1              	100.00%		H3GCJ0              	100.00%
Bootstrap support for H3B3A1 as seed ortholog is 100%.
Bootstrap support for H3GCJ0 as seed ortholog is 100%.

Group of orthologs #2418. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3AYS0              	100.00%		H3GGV1              	100.00%
Bootstrap support for H3AYS0 as seed ortholog is 100%.
Bootstrap support for H3GGV1 as seed ortholog is 100%.

Group of orthologs #2419. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3B787              	100.00%		H3GDP2              	100.00%
Bootstrap support for H3B787 as seed ortholog is 100%.
Bootstrap support for H3GDP2 as seed ortholog is 100%.

Group of orthologs #2420. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3BF82              	100.00%		H3GE41              	100.00%
Bootstrap support for H3BF82 as seed ortholog is 100%.
Bootstrap support for H3GE41 as seed ortholog is 100%.

Group of orthologs #2421. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.ramorum:82

H3AGU0              	100.00%		H3HB85              	100.00%
Bootstrap support for H3AGU0 as seed ortholog is 100%.
Bootstrap support for H3HB85 as seed ortholog is 100%.

Group of orthologs #2422. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H2ZV54              	100.00%		H3GDE2              	100.00%
H3AEE6              	24.23%		H3GV31              	22.38%
                    	       		H3GN17              	21.15%
Bootstrap support for H2ZV54 as seed ortholog is 100%.
Bootstrap support for H3GDE2 as seed ortholog is 100%.

Group of orthologs #2423. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AVR7              	100.00%		H3GHV0              	100.00%
H3AQN1              	63.97%		
H3AJI4              	27.94%		
Bootstrap support for H3AVR7 as seed ortholog is 100%.
Bootstrap support for H3GHV0 as seed ortholog is 100%.

Group of orthologs #2424. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AT28              	100.00%		H3GLF5              	100.00%
H3AML0              	23.57%		H3GLF4              	72.51%
Bootstrap support for H3AT28 as seed ortholog is 100%.
Bootstrap support for H3GLF5 as seed ortholog is 100%.

Group of orthologs #2425. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3B2A1              	100.00%		H3GID5              	100.00%
H3AXG1              	12.10%		
H3A7J2              	10.48%		
Bootstrap support for H3B2A1 as seed ortholog is 100%.
Bootstrap support for H3GID5 as seed ortholog is 100%.

Group of orthologs #2426. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.ramorum:81

H3BA06              	100.00%		H3GKR3              	100.00%
H3B838              	51.00%		
H3ARV0              	24.24%		
Bootstrap support for H3BA06 as seed ortholog is 57%.
Alternative seed ortholog is M3XJ95 (10 bits away from this cluster)
Bootstrap support for H3GKR3 as seed ortholog is 100%.

Group of orthologs #2427. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AYZ3              	100.00%		H3H1A1              	100.00%
H3A8K7              	36.56%		H3GLN7              	7.94%
Bootstrap support for H3AYZ3 as seed ortholog is 100%.
Bootstrap support for H3H1A1 as seed ortholog is 100%.

Group of orthologs #2428. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3A313              	100.00%		H3GCX3              	100.00%
H3AG95              	55.03%		
Bootstrap support for H3A313 as seed ortholog is 100%.
Bootstrap support for H3GCX3 as seed ortholog is 100%.

Group of orthologs #2429. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:17

H3AEW2              	100.00%		H3H2B6              	100.00%
                    	       		H3GGN2              	93.35%
Bootstrap support for H3AEW2 as seed ortholog is 100%.
Bootstrap support for H3H2B6 as seed ortholog is 69%.
Alternative seed ortholog is H3H1S5 (17 bits away from this cluster)

Group of orthologs #2430. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AW30              	100.00%		H3GPK3              	100.00%
                    	       		H3GPK5              	41.81%
Bootstrap support for H3AW30 as seed ortholog is 100%.
Bootstrap support for H3GPK3 as seed ortholog is 100%.

Group of orthologs #2431. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3BAJ2              	100.00%		H3GE79              	100.00%
H3APH4              	36.51%		
Bootstrap support for H3BAJ2 as seed ortholog is 100%.
Bootstrap support for H3GE79 as seed ortholog is 100%.

Group of orthologs #2432. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H2ZTG1              	100.00%		H3G5X3              	100.00%
Bootstrap support for H2ZTG1 as seed ortholog is 100%.
Bootstrap support for H3G5X3 as seed ortholog is 100%.

Group of orthologs #2433. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AWB1              	100.00%		H3GHD2              	100.00%
Bootstrap support for H3AWB1 as seed ortholog is 100%.
Bootstrap support for H3GHD2 as seed ortholog is 100%.

Group of orthologs #2434. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AXF2              	100.00%		H3GH71              	100.00%
Bootstrap support for H3AXF2 as seed ortholog is 100%.
Bootstrap support for H3GH71 as seed ortholog is 100%.

Group of orthologs #2435. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.ramorum:81

H3BB18              	100.00%		H3G7Q1              	100.00%
Bootstrap support for H3BB18 as seed ortholog is 73%.
Alternative seed ortholog is H3A337 (13 bits away from this cluster)
Bootstrap support for H3G7Q1 as seed ortholog is 100%.

Group of orthologs #2436. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AMW0              	100.00%		H3GV47              	100.00%
Bootstrap support for H3AMW0 as seed ortholog is 100%.
Bootstrap support for H3GV47 as seed ortholog is 100%.

Group of orthologs #2437. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.ramorum:81

H3AZ01              	100.00%		H3GLH8              	100.00%
Bootstrap support for H3AZ01 as seed ortholog is 100%.
Bootstrap support for H3GLH8 as seed ortholog is 100%.

Group of orthologs #2438. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.ramorum:7

H3B7J2              	100.00%		H3GY28              	100.00%
Bootstrap support for H3B7J2 as seed ortholog is 87%.
Bootstrap support for H3GY28 as seed ortholog is 59%.
Alternative seed ortholog is H3G8P6 (7 bits away from this cluster)

Group of orthologs #2439. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:33

H3AE94              	100.00%		H3H636              	100.00%
H2ZUM7              	14.00%		H3H558              	52.36%
                    	       		H3GF22              	37.94%
                    	       		H3H628              	36.57%
                    	       		H3GTG7              	35.61%
                    	       		H3H454              	35.27%
                    	       		H3GEX6              	18.32%
                    	       		H3H7T8              	13.60%
Bootstrap support for H3AE94 as seed ortholog is 100%.
Bootstrap support for H3H636 as seed ortholog is 76%.

Group of orthologs #2440. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.ramorum:80

H3B411              	100.00%		H3GMA6              	100.00%
H3AK31              	38.59%		
H3BG49              	15.97%		
H3AZH5              	12.74%		
Bootstrap support for H3B411 as seed ortholog is 73%.
Alternative seed ortholog is H3A8Z2 (20 bits away from this cluster)
Bootstrap support for H3GMA6 as seed ortholog is 100%.

Group of orthologs #2441. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:80

H3AP23              	100.00%		H3GY12              	100.00%
                    	       		H3GJQ9              	18.26%
                    	       		H3GDB1              	17.84%
Bootstrap support for H3AP23 as seed ortholog is 39%.
Alternative seed ortholog is H3AE77 (3 bits away from this cluster)
Bootstrap support for H3GY12 as seed ortholog is 100%.

Group of orthologs #2442. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.ramorum:80

H3B547              	100.00%		H3H103              	100.00%
H3ASW5              	45.34%		
H3AEB8              	22.83%		
Bootstrap support for H3B547 as seed ortholog is 52%.
Alternative seed ortholog is H3A448 (4 bits away from this cluster)
Bootstrap support for H3H103 as seed ortholog is 100%.

Group of orthologs #2443. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:80

H3AXX2              	100.00%		H3G538              	100.00%
H3AIG3              	87.50%		
Bootstrap support for H3AXX2 as seed ortholog is 100%.
Bootstrap support for H3G538 as seed ortholog is 100%.

Group of orthologs #2444. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:80

H3AX36              	100.00%		H3G6K1              	100.00%
H3AIC5              	56.14%		
Bootstrap support for H3AX36 as seed ortholog is 100%.
Bootstrap support for H3G6K1 as seed ortholog is 100%.

Group of orthologs #2445. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:80

M3XLL0              	100.00%		H3GFJ7              	100.00%
Bootstrap support for M3XLL0 as seed ortholog is 100%.
Bootstrap support for H3GFJ7 as seed ortholog is 100%.

Group of orthologs #2446. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:80

H3BE72              	100.00%		H3H2L4              	100.00%
Bootstrap support for H3BE72 as seed ortholog is 100%.
Bootstrap support for H3H2L4 as seed ortholog is 100%.

Group of orthologs #2447. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.ramorum:80

H3B7Q3              	100.00%		H3HAV8              	100.00%
Bootstrap support for H3B7Q3 as seed ortholog is 100%.
Bootstrap support for H3HAV8 as seed ortholog is 100%.

Group of orthologs #2448. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3AZG3              	100.00%		H3GRM8              	100.00%
                    	       		H3H1G5              	16.56%
Bootstrap support for H3AZG3 as seed ortholog is 100%.
Bootstrap support for H3GRM8 as seed ortholog is 100%.

Group of orthologs #2449. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3AA50              	100.00%		H3G9B7              	100.00%
Bootstrap support for H3AA50 as seed ortholog is 100%.
Bootstrap support for H3G9B7 as seed ortholog is 100%.

Group of orthologs #2450. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3BBA1              	100.00%		H3G5G3              	100.00%
Bootstrap support for H3BBA1 as seed ortholog is 100%.
Bootstrap support for H3G5G3 as seed ortholog is 100%.

Group of orthologs #2451. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3AQ08              	100.00%		H3GUT6              	100.00%
Bootstrap support for H3AQ08 as seed ortholog is 100%.
Bootstrap support for H3GUT6 as seed ortholog is 100%.

Group of orthologs #2452. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3AFS0              	100.00%		H3H421              	100.00%
Bootstrap support for H3AFS0 as seed ortholog is 100%.
Bootstrap support for H3H421 as seed ortholog is 100%.

Group of orthologs #2453. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.ramorum:79

H3B9V9              	100.00%		H3GGX7              	100.00%
Bootstrap support for H3B9V9 as seed ortholog is 86%.
Bootstrap support for H3GGX7 as seed ortholog is 100%.

Group of orthologs #2454. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3B5R4              	100.00%		H3GZN2              	100.00%
Bootstrap support for H3B5R4 as seed ortholog is 100%.
Bootstrap support for H3GZN2 as seed ortholog is 100%.

Group of orthologs #2455. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.ramorum:79

H3B7E9              	100.00%		H3H1K0              	100.00%
Bootstrap support for H3B7E9 as seed ortholog is 100%.
Bootstrap support for H3H1K0 as seed ortholog is 100%.

Group of orthologs #2456. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

H3ABB4              	100.00%		H3GG37              	100.00%
H3AVZ3              	55.19%		
Bootstrap support for H3ABB4 as seed ortholog is 100%.
Bootstrap support for H3GG37 as seed ortholog is 100%.

Group of orthologs #2457. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

H3ASK1              	100.00%		H3G5W1              	100.00%
H3AAH2              	47.56%		
Bootstrap support for H3ASK1 as seed ortholog is 100%.
Bootstrap support for H3G5W1 as seed ortholog is 100%.

Group of orthologs #2458. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:78

H2ZU10              	100.00%		H3GBB8              	100.00%
Bootstrap support for H2ZU10 as seed ortholog is 68%.
Alternative seed ortholog is H2ZY87 (12 bits away from this cluster)
Bootstrap support for H3GBB8 as seed ortholog is 100%.

Group of orthologs #2459. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

H3A3M1              	100.00%		H3GT42              	100.00%
Bootstrap support for H3A3M1 as seed ortholog is 100%.
Bootstrap support for H3GT42 as seed ortholog is 100%.

Group of orthologs #2460. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

H2ZRK7              	100.00%		H3HCV9              	100.00%
Bootstrap support for H2ZRK7 as seed ortholog is 100%.
Bootstrap support for H3HCV9 as seed ortholog is 100%.

Group of orthologs #2461. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

H3B4N5              	100.00%		H3GNS7              	100.00%
Bootstrap support for H3B4N5 as seed ortholog is 100%.
Bootstrap support for H3GNS7 as seed ortholog is 100%.

Group of orthologs #2462. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

H3ASD2              	100.00%		H3H5Y6              	100.00%
Bootstrap support for H3ASD2 as seed ortholog is 100%.
Bootstrap support for H3H5Y6 as seed ortholog is 100%.

Group of orthologs #2463. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.ramorum:78

M3XHC8              	100.00%		H3GNG9              	100.00%
Bootstrap support for M3XHC8 as seed ortholog is 100%.
Bootstrap support for H3GNG9 as seed ortholog is 100%.

Group of orthologs #2464. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H3AN52              	100.00%		H3GDC8              	100.00%
                    	       		H3GDC6              	81.48%
                    	       		H3GDC4              	35.87%
                    	       		H3GDC5              	19.69%
                    	       		H3GDC2              	19.10%
                    	       		H3GDC1              	18.71%
                    	       		H3GDC3              	18.52%
                    	       		H3GF14              	15.20%
                    	       		H3GD98              	15.01%
                    	       		H3H2S5              	14.42%
                    	       		H3GD97              	14.04%
                    	       		H3GD91              	13.45%
                    	       		H3GG92              	13.06%
                    	       		H3H8B5              	13.06%
                    	       		H3GDA0              	12.48%
                    	       		H3H2S3              	12.28%
                    	       		H3H2S6              	12.28%
                    	       		H3GGQ5              	11.89%
                    	       		H3H2S4              	11.89%
                    	       		H3GF15              	11.31%
                    	       		H3GF13              	10.33%
                    	       		H3GD92              	10.14%
                    	       		H3GD96              	9.55%
                    	       		H3H1Q4              	8.97%
                    	       		H3GD99              	8.97%
                    	       		H3GPS9              	7.80%
                    	       		H3HE97              	7.41%
                    	       		H3GEX0              	7.21%
                    	       		H3H8T1              	7.21%
                    	       		H3GEX1              	7.02%
                    	       		H3GZH8              	7.02%
                    	       		H3GDQ4              	6.43%
                    	       		H3GDP0              	5.85%
                    	       		H3GDP6              	5.85%
                    	       		H3GX50              	5.46%
                    	       		H3GDA1              	5.07%
Bootstrap support for H3AN52 as seed ortholog is 100%.
Bootstrap support for H3GDC8 as seed ortholog is 100%.

Group of orthologs #2465. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:77

H2ZZV3              	100.00%		H3H9D1              	100.00%
H2ZUS4              	51.03%		
H3ASA6              	11.95%		
H3AQ47              	11.72%		
H3B479              	9.89%		
H3ALG5              	8.97%		
H3AVM1              	8.28%		
H3ABJ9              	5.52%		
Bootstrap support for H2ZZV3 as seed ortholog is 66%.
Alternative seed ortholog is H2ZVJ9 (12 bits away from this cluster)
Bootstrap support for H3H9D1 as seed ortholog is 100%.

Group of orthologs #2466. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.ramorum:77

H3B9P5              	100.00%		H3GKN1              	100.00%
H3AIF7              	81.00%		
M3XIN1              	81.00%		
H3BDQ8              	62.90%		
Bootstrap support for H3B9P5 as seed ortholog is 91%.
Bootstrap support for H3GKN1 as seed ortholog is 100%.

Group of orthologs #2467. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

M3XH09              	100.00%		H3GZR3              	100.00%
                    	       		H3GML1              	19.71%
                    	       		H3GML0              	17.31%
                    	       		H3G4Z4              	14.18%
Bootstrap support for M3XH09 as seed ortholog is 100%.
Bootstrap support for H3GZR3 as seed ortholog is 100%.

Group of orthologs #2468. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:13

H2ZVZ9              	100.00%		H3GVX5              	100.00%
H3AJH1              	42.53%		H3GVX6              	35.77%
Bootstrap support for H2ZVZ9 as seed ortholog is 100%.
Bootstrap support for H3GVX5 as seed ortholog is 62%.
Alternative seed ortholog is H3GVY2 (13 bits away from this cluster)

Group of orthologs #2469. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.ramorum:77

H3A2S2              	100.00%		H3HAA0              	100.00%
                    	       		H3GQC3              	99.87%
                    	       		H3GDH4              	5.08%
Bootstrap support for H3A2S2 as seed ortholog is 50%.
Alternative seed ortholog is H3ANE8 (23 bits away from this cluster)
Bootstrap support for H3HAA0 as seed ortholog is 100%.

Group of orthologs #2470. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H2ZVD9              	100.00%		H3GTE9              	100.00%
H3A4Y8              	44.78%		
Bootstrap support for H2ZVD9 as seed ortholog is 100%.
Bootstrap support for H3GTE9 as seed ortholog is 100%.

Group of orthologs #2471. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H3AX89              	100.00%		H3GMB2              	100.00%
H3BCE8              	7.41%		
Bootstrap support for H3AX89 as seed ortholog is 100%.
Bootstrap support for H3GMB2 as seed ortholog is 100%.

Group of orthologs #2472. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H3A7H4              	100.00%		H3G7D6              	100.00%
Bootstrap support for H3A7H4 as seed ortholog is 100%.
Bootstrap support for H3G7D6 as seed ortholog is 100%.

Group of orthologs #2473. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H3A029              	100.00%		H3GIC8              	100.00%
Bootstrap support for H3A029 as seed ortholog is 100%.
Bootstrap support for H3GIC8 as seed ortholog is 100%.

Group of orthologs #2474. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:20

H3AGQ0              	100.00%		H3GNR9              	100.00%
Bootstrap support for H3AGQ0 as seed ortholog is 100%.
Bootstrap support for H3GNR9 as seed ortholog is 65%.
Alternative seed ortholog is H3GKR4 (20 bits away from this cluster)

Group of orthologs #2475. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.ramorum:35

H3B8X7              	100.00%		H3GWV0              	100.00%
Bootstrap support for H3B8X7 as seed ortholog is 71%.
Alternative seed ortholog is H3B374 (11 bits away from this cluster)
Bootstrap support for H3GWV0 as seed ortholog is 94%.

Group of orthologs #2476. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H3B1J4              	100.00%		H3H5A6              	100.00%
Bootstrap support for H3B1J4 as seed ortholog is 100%.
Bootstrap support for H3H5A6 as seed ortholog is 100%.

Group of orthologs #2477. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.ramorum:77

H3BGY5              	100.00%		H3HBC0              	100.00%
Bootstrap support for H3BGY5 as seed ortholog is 100%.
Bootstrap support for H3HBC0 as seed ortholog is 100%.

Group of orthologs #2478. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3AJT5              	100.00%		H3H258              	100.00%
H3BHB1              	34.14%		H3GWW8              	99.93%
M3XJB5              	13.71%		
H3ATL2              	13.14%		
M3XJT7              	8.57%		
Bootstrap support for H3AJT5 as seed ortholog is 100%.
Bootstrap support for H3H258 as seed ortholog is 100%.

Group of orthologs #2479. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3A0L2              	100.00%		H3GXU8              	100.00%
H2ZUH8              	42.06%		
H2ZYT4              	26.64%		
Bootstrap support for H3A0L2 as seed ortholog is 100%.
Bootstrap support for H3GXU8 as seed ortholog is 100%.

Group of orthologs #2480. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3BGK7              	100.00%		H3GDZ2              	100.00%
H3B572              	32.23%		
H3B1V9              	25.06%		
Bootstrap support for H3BGK7 as seed ortholog is 100%.
Bootstrap support for H3GDZ2 as seed ortholog is 100%.

Group of orthologs #2481. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3AH95              	100.00%		H3GQC6              	100.00%
H3B6R9              	30.34%		
Bootstrap support for H3AH95 as seed ortholog is 100%.
Bootstrap support for H3GQC6 as seed ortholog is 100%.

Group of orthologs #2482. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3A7L9              	100.00%		H3H253              	100.00%
H3ACP5              	17.22%		
Bootstrap support for H3A7L9 as seed ortholog is 100%.
Bootstrap support for H3H253 as seed ortholog is 100%.

Group of orthologs #2483. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:17

H3AIR2              	100.00%		H3GYJ7              	100.00%
H3AMM7              	100.00%		
Bootstrap support for H3AIR2 as seed ortholog is 100%.
Bootstrap support for H3AMM7 as seed ortholog is 100%.
Bootstrap support for H3GYJ7 as seed ortholog is 71%.
Alternative seed ortholog is H3GDP9 (17 bits away from this cluster)

Group of orthologs #2484. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3AG40              	100.00%		H3HCK6              	100.00%
                    	       		H3H857              	45.11%
Bootstrap support for H3AG40 as seed ortholog is 100%.
Bootstrap support for H3HCK6 as seed ortholog is 100%.

Group of orthologs #2485. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3AB61              	100.00%		H3H3M3              	100.00%
Bootstrap support for H3AB61 as seed ortholog is 100%.
Bootstrap support for H3H3M3 as seed ortholog is 100%.

Group of orthologs #2486. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3B5U9              	100.00%		H3GJP6              	100.00%
Bootstrap support for H3B5U9 as seed ortholog is 100%.
Bootstrap support for H3GJP6 as seed ortholog is 100%.

Group of orthologs #2487. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.ramorum:76

H3AYR8              	100.00%		H3GWN0              	100.00%
Bootstrap support for H3AYR8 as seed ortholog is 100%.
Bootstrap support for H3GWN0 as seed ortholog is 100%.

Group of orthologs #2488. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:75

H3A4N8              	100.00%		H3G5B6              	100.00%
H3AWE9              	28.99%		H3G773              	90.89%
H3A810              	20.71%		H3G6M8              	87.04%
                    	       		H3G7G5              	49.56%
Bootstrap support for H3A4N8 as seed ortholog is 100%.
Bootstrap support for H3G5B6 as seed ortholog is 100%.

Group of orthologs #2489. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:11

H3A9X4              	100.00%		H3HAC2              	100.00%
H2ZVG1              	16.60%		
H3B1A5              	14.72%		
Bootstrap support for H3A9X4 as seed ortholog is 92%.
Bootstrap support for H3HAC2 as seed ortholog is 61%.
Alternative seed ortholog is H3H3F1 (11 bits away from this cluster)

Group of orthologs #2490. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:75

H3A297              	100.00%		H3GBT9              	100.00%
Bootstrap support for H3A297 as seed ortholog is 100%.
Bootstrap support for H3GBT9 as seed ortholog is 100%.

Group of orthologs #2491. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.ramorum:75

H3AET9              	100.00%		H3GPL4              	100.00%
Bootstrap support for H3AET9 as seed ortholog is 51%.
Alternative seed ortholog is H3B1A6 (2 bits away from this cluster)
Bootstrap support for H3GPL4 as seed ortholog is 100%.

Group of orthologs #2492. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:75

H3B875              	100.00%		H3G4Y3              	100.00%
Bootstrap support for H3B875 as seed ortholog is 100%.
Bootstrap support for H3G4Y3 as seed ortholog is 100%.

Group of orthologs #2493. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:75

H3AVJ8              	100.00%		H3GWN9              	100.00%
Bootstrap support for H3AVJ8 as seed ortholog is 100%.
Bootstrap support for H3GWN9 as seed ortholog is 100%.

Group of orthologs #2494. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:75

H3BHI0              	100.00%		H3GQ67              	100.00%
Bootstrap support for H3BHI0 as seed ortholog is 100%.
Bootstrap support for H3GQ67 as seed ortholog is 100%.

Group of orthologs #2495. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.ramorum:75

H3BDB8              	100.00%		H3HBP6              	100.00%
Bootstrap support for H3BDB8 as seed ortholog is 100%.
Bootstrap support for H3HBP6 as seed ortholog is 100%.

Group of orthologs #2496. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:5

H3AAP4              	100.00%		H3GBU4              	100.00%
H3AWK3              	100.00%		H3GUM8              	6.45%
Bootstrap support for H3AAP4 as seed ortholog is 100%.
Bootstrap support for H3AWK3 as seed ortholog is 100%.
Bootstrap support for H3GBU4 as seed ortholog is 55%.
Alternative seed ortholog is H3H3P1 (5 bits away from this cluster)

Group of orthologs #2497. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:2

H3AAW2              	100.00%		H3H9P8              	100.00%
                    	       		H3GEB4              	99.58%
Bootstrap support for H3AAW2 as seed ortholog is 100%.
Bootstrap support for H3H9P8 as seed ortholog is 50%.
Alternative seed ortholog is H3GES8 (2 bits away from this cluster)

Group of orthologs #2498. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3BFV2              	100.00%		H3H1C3              	100.00%
H3B584              	44.70%		
Bootstrap support for H3BFV2 as seed ortholog is 100%.
Bootstrap support for H3H1C3 as seed ortholog is 100%.

Group of orthologs #2499. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3A610              	100.00%		H3GMX3              	100.00%
Bootstrap support for H3A610 as seed ortholog is 100%.
Bootstrap support for H3GMX3 as seed ortholog is 100%.

Group of orthologs #2500. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3AHZ8              	100.00%		H3GG85              	100.00%
Bootstrap support for H3AHZ8 as seed ortholog is 100%.
Bootstrap support for H3GG85 as seed ortholog is 100%.

Group of orthologs #2501. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:74

H3ATJ1              	100.00%		H3G7D7              	100.00%
Bootstrap support for H3ATJ1 as seed ortholog is 92%.
Bootstrap support for H3G7D7 as seed ortholog is 100%.

Group of orthologs #2502. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3B668              	100.00%		H3G5H3              	100.00%
Bootstrap support for H3B668 as seed ortholog is 100%.
Bootstrap support for H3G5H3 as seed ortholog is 100%.

Group of orthologs #2503. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3B0F1              	100.00%		H3GC55              	100.00%
Bootstrap support for H3B0F1 as seed ortholog is 100%.
Bootstrap support for H3GC55 as seed ortholog is 100%.

Group of orthologs #2504. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3BIT2              	100.00%		H3G6J0              	100.00%
Bootstrap support for H3BIT2 as seed ortholog is 100%.
Bootstrap support for H3G6J0 as seed ortholog is 100%.

Group of orthologs #2505. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3AZ34              	100.00%		H3H3N9              	100.00%
Bootstrap support for H3AZ34 as seed ortholog is 100%.
Bootstrap support for H3H3N9 as seed ortholog is 100%.

Group of orthologs #2506. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3BA32              	100.00%		H3GVD1              	100.00%
Bootstrap support for H3BA32 as seed ortholog is 100%.
Bootstrap support for H3GVD1 as seed ortholog is 100%.

Group of orthologs #2507. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.ramorum:74

H3AV23              	100.00%		H3HB80              	100.00%
Bootstrap support for H3AV23 as seed ortholog is 100%.
Bootstrap support for H3HB80 as seed ortholog is 100%.

Group of orthologs #2508. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.ramorum:9

H3AS95              	100.00%		H3GIJ2              	100.00%
                    	       		H3H7X0              	70.75%
                    	       		H3GII7              	66.02%
Bootstrap support for H3AS95 as seed ortholog is 100%.
Bootstrap support for H3GIJ2 as seed ortholog is 55%.
Alternative seed ortholog is H3GRV2 (9 bits away from this cluster)

Group of orthologs #2509. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.ramorum:73

H2ZY23              	100.00%		H3H1L1              	100.00%
M3XI97              	25.71%		
Bootstrap support for H2ZY23 as seed ortholog is 100%.
Bootstrap support for H3H1L1 as seed ortholog is 100%.

Group of orthologs #2510. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.ramorum:73

H3AAS6              	100.00%		H3G587              	100.00%
Bootstrap support for H3AAS6 as seed ortholog is 97%.
Bootstrap support for H3G587 as seed ortholog is 100%.

Group of orthologs #2511. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.ramorum:72

H3BG08              	100.00%		H3GJF5              	100.00%
H3A7J8              	28.89%		H3GJF6              	29.91%
H3B1Y9              	18.03%		H3GJF7              	29.44%
                    	       		H3GJR0              	19.63%
Bootstrap support for H3BG08 as seed ortholog is 78%.
Bootstrap support for H3GJF5 as seed ortholog is 100%.

Group of orthologs #2512. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.ramorum:72

H3BGL1              	100.00%		H3GBP4              	100.00%
H3A671              	32.17%		
H3AIJ6              	26.30%		
Bootstrap support for H3BGL1 as seed ortholog is 57%.
Alternative seed ortholog is H2ZRK6 (20 bits away from this cluster)
Bootstrap support for H3GBP4 as seed ortholog is 100%.

Group of orthologs #2513. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3A7B1              	100.00%		H3GYT9              	100.00%
H3BDI9              	29.91%		
Bootstrap support for H3A7B1 as seed ortholog is 100%.
Bootstrap support for H3GYT9 as seed ortholog is 100%.

Group of orthologs #2514. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H2ZXL4              	100.00%		H3GJ40              	100.00%
Bootstrap support for H2ZXL4 as seed ortholog is 100%.
Bootstrap support for H3GJ40 as seed ortholog is 100%.

Group of orthologs #2515. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3A788              	100.00%		H3GM61              	100.00%
Bootstrap support for H3A788 as seed ortholog is 100%.
Bootstrap support for H3GM61 as seed ortholog is 100%.

Group of orthologs #2516. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3AR72              	100.00%		H3GAE3              	100.00%
Bootstrap support for H3AR72 as seed ortholog is 100%.
Bootstrap support for H3GAE3 as seed ortholog is 100%.

Group of orthologs #2517. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3B0N6              	100.00%		H3GKQ3              	100.00%
Bootstrap support for H3B0N6 as seed ortholog is 100%.
Bootstrap support for H3GKQ3 as seed ortholog is 100%.

Group of orthologs #2518. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3A8H3              	100.00%		H3HE92              	100.00%
Bootstrap support for H3A8H3 as seed ortholog is 100%.
Bootstrap support for H3HE92 as seed ortholog is 100%.

Group of orthologs #2519. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3B2M9              	100.00%		H3GYH4              	100.00%
Bootstrap support for H3B2M9 as seed ortholog is 100%.
Bootstrap support for H3GYH4 as seed ortholog is 100%.

Group of orthologs #2520. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.ramorum:72

H3AQX8              	100.00%		H3HDB0              	100.00%
Bootstrap support for H3AQX8 as seed ortholog is 100%.
Bootstrap support for H3HDB0 as seed ortholog is 100%.

Group of orthologs #2521. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.ramorum:72

H3B8C0              	100.00%		H3H3B6              	100.00%
Bootstrap support for H3B8C0 as seed ortholog is 75%.
Bootstrap support for H3H3B6 as seed ortholog is 100%.

Group of orthologs #2522. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:71

H3B4I3              	46.64%		H3GIM5              	100.00%
H3AZZ5              	100.00%		H3GSA9              	100.00%
H3B0G4              	22.30%		
H2ZT78              	20.45%		
H3AY25              	18.99%		
H3B3S1              	18.70%		
Bootstrap support for H3AZZ5 as seed ortholog is 100%.
Bootstrap support for H3GIM5 as seed ortholog is 100%.
Bootstrap support for H3GSA9 as seed ortholog is 100%.

Group of orthologs #2523. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:71

H3A3S9              	100.00%		H3GUZ8              	100.00%
H3BII5              	8.08%		
Bootstrap support for H3A3S9 as seed ortholog is 100%.
Bootstrap support for H3GUZ8 as seed ortholog is 100%.

Group of orthologs #2524. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:71

H3ATX9              	100.00%		H3GDA9              	100.00%
                    	       		H3GDB0              	51.45%
Bootstrap support for H3ATX9 as seed ortholog is 100%.
Bootstrap support for H3GDA9 as seed ortholog is 100%.

Group of orthologs #2525. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:71

H3B581              	100.00%		H3H1W4              	100.00%
                    	       		H3H6V6              	100.00%
Bootstrap support for H3B581 as seed ortholog is 100%.
Bootstrap support for H3H1W4 as seed ortholog is 100%.
Bootstrap support for H3H6V6 as seed ortholog is 100%.

Group of orthologs #2526. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:71

H3B7L1              	100.00%		H3G5L6              	100.00%
Bootstrap support for H3B7L1 as seed ortholog is 100%.
Bootstrap support for H3G5L6 as seed ortholog is 100%.

Group of orthologs #2527. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.ramorum:71

H3B3W3              	100.00%		H3GJ45              	100.00%
Bootstrap support for H3B3W3 as seed ortholog is 100%.
Bootstrap support for H3GJ45 as seed ortholog is 100%.

Group of orthologs #2528. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.ramorum:70

H3B7U8              	100.00%		H3GRU4              	100.00%
                    	       		H3H6R8              	99.13%
                    	       		H3H5Q8              	16.52%
Bootstrap support for H3B7U8 as seed ortholog is 87%.
Bootstrap support for H3GRU4 as seed ortholog is 100%.

Group of orthologs #2529. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.ramorum:70

H3BGA6              	100.00%		H3GBG7              	100.00%
H3A5W4              	61.43%		
Bootstrap support for H3BGA6 as seed ortholog is 100%.
Bootstrap support for H3GBG7 as seed ortholog is 100%.

Group of orthologs #2530. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H3AYJ3              	100.00%		H3H199              	100.00%
H3A1S9              	12.26%		
H3A9U4              	9.03%		
M3XID6              	7.10%		
H3B061              	5.16%		
Bootstrap support for H3AYJ3 as seed ortholog is 100%.
Bootstrap support for H3H199 as seed ortholog is 100%.

Group of orthologs #2531. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H3AD63              	100.00%		H3G7D0              	100.00%
H3A5H5              	37.76%		H3GUX7              	91.68%
Bootstrap support for H3AD63 as seed ortholog is 100%.
Bootstrap support for H3G7D0 as seed ortholog is 100%.

Group of orthologs #2532. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H2ZYH1              	100.00%		H3G6W4              	100.00%
                    	       		H3G5J2              	41.55%
Bootstrap support for H2ZYH1 as seed ortholog is 100%.
Bootstrap support for H3G6W4 as seed ortholog is 100%.

Group of orthologs #2533. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H2ZRK9              	100.00%		H3G7H7              	100.00%
Bootstrap support for H2ZRK9 as seed ortholog is 100%.
Bootstrap support for H3G7H7 as seed ortholog is 100%.

Group of orthologs #2534. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.ramorum:69

H2ZX31              	100.00%		H3GBU5              	100.00%
Bootstrap support for H2ZX31 as seed ortholog is 85%.
Bootstrap support for H3GBU5 as seed ortholog is 100%.

Group of orthologs #2535. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H2ZTD5              	100.00%		H3GFC9              	100.00%
Bootstrap support for H2ZTD5 as seed ortholog is 100%.
Bootstrap support for H3GFC9 as seed ortholog is 100%.

Group of orthologs #2536. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H2ZXT8              	100.00%		H3GMC6              	100.00%
Bootstrap support for H2ZXT8 as seed ortholog is 100%.
Bootstrap support for H3GMC6 as seed ortholog is 100%.

Group of orthologs #2537. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H3A7M0              	100.00%		H3HBL7              	100.00%
Bootstrap support for H3A7M0 as seed ortholog is 100%.
Bootstrap support for H3HBL7 as seed ortholog is 100%.

Group of orthologs #2538. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.ramorum:69

H3BGS2              	100.00%		H3HCK2              	100.00%
Bootstrap support for H3BGS2 as seed ortholog is 100%.
Bootstrap support for H3HCK2 as seed ortholog is 100%.

Group of orthologs #2539. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:68

M3XID9              	100.00%		H3GXG8              	100.00%
H3ATG9              	73.49%		H3GUP7              	18.47%
H3AUE1              	66.67%		H3GVS1              	13.69%
H3AUT0              	49.61%		
H3A6C0              	16.01%		
H3A6T5              	5.51%		
Bootstrap support for M3XID9 as seed ortholog is 100%.
Bootstrap support for H3GXG8 as seed ortholog is 100%.

Group of orthologs #2540. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:68

H3B7L8              	100.00%		H3GZB6              	100.00%
H3B330              	76.21%		
Bootstrap support for H3B7L8 as seed ortholog is 100%.
Bootstrap support for H3GZB6 as seed ortholog is 100%.

Group of orthologs #2541. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:68

H3BHD1              	100.00%		H3HBV4              	100.00%
M3XGT7              	14.72%		
Bootstrap support for H3BHD1 as seed ortholog is 100%.
Bootstrap support for H3HBV4 as seed ortholog is 100%.

Group of orthologs #2542. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.ramorum:68

M3XJ30              	100.00%		H3G7X5              	100.00%
Bootstrap support for M3XJ30 as seed ortholog is 49%.
Alternative seed ortholog is H3B7Y4 (1 bits away from this cluster)
Bootstrap support for H3G7X5 as seed ortholog is 100%.

Group of orthologs #2543. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:68

H3B7E6              	100.00%		H3GJN8              	100.00%
Bootstrap support for H3B7E6 as seed ortholog is 100%.
Bootstrap support for H3GJN8 as seed ortholog is 100%.

Group of orthologs #2544. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.ramorum:68

H3BDT4              	100.00%		H3GJ66              	100.00%
Bootstrap support for H3BDT4 as seed ortholog is 100%.
Bootstrap support for H3GJ66 as seed ortholog is 100%.

Group of orthologs #2545. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.ramorum:68

H3AVS3              	100.00%		H3HAS7              	100.00%
Bootstrap support for H3AVS3 as seed ortholog is 50%.
Alternative seed ortholog is H3B6G6 (16 bits away from this cluster)
Bootstrap support for H3HAS7 as seed ortholog is 100%.

Group of orthologs #2546. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3AY93              	100.00%		H3GIV1              	100.00%
H2ZUY1              	26.32%		
H3A000              	24.21%		
H3AC14              	23.32%		
H2ZUT7              	9.07%		
H3A537              	8.96%		
H3ATI5              	8.29%		
H3BAI6              	7.79%		
H3BGE4              	7.51%		
H3B6E0              	7.29%		
H3B4T4              	6.40%		
H3AXD4              	6.34%		
H3BE19              	5.90%		
H3B5L2              	5.45%		
H3AP38              	5.34%		
H3B1I9              	5.34%		
H3B1H9              	5.18%		
Bootstrap support for H3AY93 as seed ortholog is 100%.
Bootstrap support for H3GIV1 as seed ortholog is 100%.

Group of orthologs #2547. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3A373              	100.00%		H3G6V6              	100.00%
H3A0R2              	100.00%		H3H4J2              	100.00%
H3ATH2              	43.40%		H3GVV1              	20.89%
H3AX56              	31.07%		H3GVV0              	18.59%
H3B492              	8.43%		H3GVV3              	17.74%
                    	       		H3GX00              	12.57%
Bootstrap support for H3A373 as seed ortholog is 100%.
Bootstrap support for H3A0R2 as seed ortholog is 100%.
Bootstrap support for H3G6V6 as seed ortholog is 100%.
Bootstrap support for H3H4J2 as seed ortholog is 100%.

Group of orthologs #2548. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.ramorum:11

H2ZWC4              	100.00%		H3H9W8              	100.00%
                    	       		H3H6P2              	91.06%
                    	       		H3H769              	79.67%
                    	       		H3H5X8              	70.73%
                    	       		H3H6C2              	55.08%
                    	       		H3GAI1              	48.78%
                    	       		H3GB10              	48.17%
                    	       		H3H979              	47.97%
                    	       		H3H2I6              	35.16%
                    	       		H3GFV1              	30.08%
Bootstrap support for H2ZWC4 as seed ortholog is 56%.
Alternative seed ortholog is H3BCP7 (3 bits away from this cluster)
Bootstrap support for H3H9W8 as seed ortholog is 61%.
Alternative seed ortholog is H3H759 (11 bits away from this cluster)

Group of orthologs #2549. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:12

H3BHC0              	100.00%		H3HAQ7              	100.00%
H3BHC7              	15.75%		
Bootstrap support for H3BHC0 as seed ortholog is 100%.
Bootstrap support for H3HAQ7 as seed ortholog is 59%.
Alternative seed ortholog is H3GWG3 (12 bits away from this cluster)

Group of orthologs #2550. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H2ZS72              	100.00%		H3GHF6              	100.00%
Bootstrap support for H2ZS72 as seed ortholog is 100%.
Bootstrap support for H3GHF6 as seed ortholog is 100%.

Group of orthologs #2551. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3A0Q4              	100.00%		H3GI56              	100.00%
Bootstrap support for H3A0Q4 as seed ortholog is 100%.
Bootstrap support for H3GI56 as seed ortholog is 100%.

Group of orthologs #2552. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H2ZZ39              	100.00%		H3GLQ8              	100.00%
Bootstrap support for H2ZZ39 as seed ortholog is 100%.
Bootstrap support for H3GLQ8 as seed ortholog is 100%.

Group of orthologs #2553. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3AM59              	100.00%		H3G547              	100.00%
Bootstrap support for H3AM59 as seed ortholog is 100%.
Bootstrap support for H3G547 as seed ortholog is 100%.

Group of orthologs #2554. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3BCM9              	100.00%		H3GI37              	100.00%
Bootstrap support for H3BCM9 as seed ortholog is 100%.
Bootstrap support for H3GI37 as seed ortholog is 100%.

Group of orthologs #2555. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

M3XLH6              	100.00%		H3GGR6              	100.00%
Bootstrap support for M3XLH6 as seed ortholog is 100%.
Bootstrap support for H3GGR6 as seed ortholog is 100%.

Group of orthologs #2556. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3B072              	100.00%		H3H109              	100.00%
Bootstrap support for H3B072 as seed ortholog is 100%.
Bootstrap support for H3H109 as seed ortholog is 100%.

Group of orthologs #2557. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.ramorum:67

H3BBD8              	100.00%		H3H2C3              	100.00%
Bootstrap support for H3BBD8 as seed ortholog is 100%.
Bootstrap support for H3H2C3 as seed ortholog is 100%.

Group of orthologs #2558. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:66

H3AUV8              	100.00%		H3GVE4              	100.00%
H3ATF2              	28.80%		
H3BFF2              	6.11%		
Bootstrap support for H3AUV8 as seed ortholog is 100%.
Bootstrap support for H3GVE4 as seed ortholog is 100%.

Group of orthologs #2559. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:66

H3AKM0              	100.00%		H3H2G3              	100.00%
Bootstrap support for H3AKM0 as seed ortholog is 100%.
Bootstrap support for H3H2G3 as seed ortholog is 100%.

Group of orthologs #2560. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:66

H3AZ38              	100.00%		H3GS64              	100.00%
Bootstrap support for H3AZ38 as seed ortholog is 100%.
Bootstrap support for H3GS64 as seed ortholog is 100%.

Group of orthologs #2561. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:66

M3XKT3              	100.00%		H3GA26              	100.00%
Bootstrap support for M3XKT3 as seed ortholog is 100%.
Bootstrap support for H3GA26 as seed ortholog is 100%.

Group of orthologs #2562. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:66

H3B004              	100.00%		H3H1H4              	100.00%
Bootstrap support for H3B004 as seed ortholog is 100%.
Bootstrap support for H3H1H4 as seed ortholog is 100%.

Group of orthologs #2563. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:0

H3B3F5              	100.00%		H3H9I0              	100.00%
Bootstrap support for H3B3F5 as seed ortholog is 100%.
Bootstrap support for H3H9I0 as seed ortholog is 51%.
Alternative seed ortholog is H3GRA0 (0 bits away from this cluster)

Group of orthologs #2564. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.ramorum:66

H3BA55              	100.00%		H3HBK0              	100.00%
Bootstrap support for H3BA55 as seed ortholog is 100%.
Bootstrap support for H3HBK0 as seed ortholog is 100%.

Group of orthologs #2565. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.ramorum:65

M3XGZ9              	100.00%		H3G990              	100.00%
Bootstrap support for M3XGZ9 as seed ortholog is 100%.
Bootstrap support for H3G990 as seed ortholog is 100%.

Group of orthologs #2566. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.ramorum:65

H3B4X9              	100.00%		H3HCR7              	100.00%
Bootstrap support for H3B4X9 as seed ortholog is 100%.
Bootstrap support for H3HCR7 as seed ortholog is 100%.

Group of orthologs #2567. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H3AWJ2              	100.00%		H3G6V3              	100.00%
H3AM28              	31.82%		H3GFY8              	22.59%
                    	       		H3GFY9              	20.05%
                    	       		H3GYK2              	17.51%
                    	       		H3GCM5              	6.09%
Bootstrap support for H3AWJ2 as seed ortholog is 100%.
Bootstrap support for H3G6V3 as seed ortholog is 100%.

Group of orthologs #2568. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H3AYL8              	100.00%		H3GDL4              	100.00%
H3B8K9              	100.00%		
H2ZUD9              	70.06%		
H2ZYK2              	20.73%		
H3AQS2              	13.73%		
Bootstrap support for H3AYL8 as seed ortholog is 100%.
Bootstrap support for H3B8K9 as seed ortholog is 100%.
Bootstrap support for H3GDL4 as seed ortholog is 100%.

Group of orthologs #2569. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H3ASZ8              	100.00%		H3GJW4              	100.00%
H3ATA9              	42.01%		H3GJR5              	24.91%
Bootstrap support for H3ASZ8 as seed ortholog is 100%.
Bootstrap support for H3GJW4 as seed ortholog is 100%.

Group of orthologs #2570. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H3A123              	100.00%		H3GKG2              	100.00%
H3BCA0              	41.85%		
Bootstrap support for H3A123 as seed ortholog is 100%.
Bootstrap support for H3GKG2 as seed ortholog is 100%.

Group of orthologs #2571. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:22

H3AIS5              	100.00%		H3G7N5              	100.00%
                    	       		H3G750              	10.58%
Bootstrap support for H3AIS5 as seed ortholog is 100%.
Bootstrap support for H3G7N5 as seed ortholog is 82%.

Group of orthologs #2572. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H3A390              	100.00%		H3GXK1              	100.00%
Bootstrap support for H3A390 as seed ortholog is 100%.
Bootstrap support for H3GXK1 as seed ortholog is 100%.

Group of orthologs #2573. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H2ZTG2              	100.00%		H3HBZ3              	100.00%
Bootstrap support for H2ZTG2 as seed ortholog is 100%.
Bootstrap support for H3HBZ3 as seed ortholog is 100%.

Group of orthologs #2574. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

H3B7Q8              	100.00%		H3GBP6              	100.00%
Bootstrap support for H3B7Q8 as seed ortholog is 100%.
Bootstrap support for H3GBP6 as seed ortholog is 100%.

Group of orthologs #2575. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.ramorum:64

M3XIX3              	100.00%		H3HCC9              	100.00%
Bootstrap support for M3XIX3 as seed ortholog is 100%.
Bootstrap support for H3HCC9 as seed ortholog is 100%.

Group of orthologs #2576. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:63

H2ZT66              	100.00%		H3GY56              	100.00%
                    	       		H3GY36              	13.56%
Bootstrap support for H2ZT66 as seed ortholog is 100%.
Bootstrap support for H3GY56 as seed ortholog is 100%.

Group of orthologs #2577. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:63

H3AF77              	100.00%		H3H5E5              	100.00%
                    	       		H3HCN5              	19.58%
Bootstrap support for H3AF77 as seed ortholog is 100%.
Bootstrap support for H3H5E5 as seed ortholog is 100%.

Group of orthologs #2578. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:63

H3A3H0              	100.00%		H3GFH3              	100.00%
Bootstrap support for H3A3H0 as seed ortholog is 100%.
Bootstrap support for H3GFH3 as seed ortholog is 100%.

Group of orthologs #2579. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:63

H3AB21              	100.00%		H3H3X3              	100.00%
Bootstrap support for H3AB21 as seed ortholog is 100%.
Bootstrap support for H3H3X3 as seed ortholog is 100%.

Group of orthologs #2580. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.ramorum:63

H3A814              	100.00%		H3HD06              	100.00%
Bootstrap support for H3A814 as seed ortholog is 100%.
Bootstrap support for H3HD06 as seed ortholog is 100%.

Group of orthologs #2581. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3AT45              	100.00%		H3GVJ1              	100.00%
H2ZXI5              	100.00%		H3GWC9              	100.00%
H3ACA2              	18.84%		H3GVJ2              	86.52%
M3XGT4              	16.21%		H3GWC7              	56.39%
H3B110              	15.79%		H3GWD0              	36.71%
H3ASF4              	15.16%		H3GWC8              	35.38%
M3XH33              	14.74%		
H3AZL0              	14.67%		
M3XGH9              	14.48%		
H3BAC9              	14.21%		
H3ACZ0              	13.14%		
H3ABY4              	12.38%		
H3ABV4              	12.29%		
H3AE86              	12.11%		
H3AE46              	12.00%		
H3ATQ8              	11.81%		
H3BBN2              	10.95%		
Bootstrap support for H3AT45 as seed ortholog is 100%.
Bootstrap support for H2ZXI5 as seed ortholog is 100%.
Bootstrap support for H3GVJ1 as seed ortholog is 100%.
Bootstrap support for H3GWC9 as seed ortholog is 100%.

Group of orthologs #2582. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3BF75              	100.00%		H3GMK6              	100.00%
H3A9Q2              	100.00%		H3HC77              	100.00%
H3A834              	16.61%		H3GML3              	53.87%
H3A0G1              	16.24%		H3HC80              	53.32%
H3BCY4              	11.67%		H3GDE9              	52.92%
H3B1P5              	8.00%		H3GUG0              	52.32%
                    	       		H3GMK5              	52.26%
                    	       		H3H4Y7              	52.10%
                    	       		H3GUF9              	51.55%
Bootstrap support for H3BF75 as seed ortholog is 100%.
Bootstrap support for H3A9Q2 as seed ortholog is 100%.
Bootstrap support for H3GMK6 as seed ortholog is 100%.
Bootstrap support for H3HC77 as seed ortholog is 100%.

Group of orthologs #2583. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H2ZTZ2              	100.00%		H3GXX3              	100.00%
H3ACL9              	10.43%		
Bootstrap support for H2ZTZ2 as seed ortholog is 100%.
Bootstrap support for H3GXX3 as seed ortholog is 100%.

Group of orthologs #2584. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3ABD9              	100.00%		H3GJ99              	100.00%
M3XHB9              	25.77%		
Bootstrap support for H3ABD9 as seed ortholog is 100%.
Bootstrap support for H3GJ99 as seed ortholog is 100%.

Group of orthologs #2585. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3A709              	100.00%		H3HCQ3              	100.00%
H3B8F3              	33.46%		
Bootstrap support for H3A709 as seed ortholog is 100%.
Bootstrap support for H3HCQ3 as seed ortholog is 100%.

Group of orthologs #2586. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3B8X0              	100.00%		H3H518              	100.00%
H3B6N3              	21.43%		
Bootstrap support for H3B8X0 as seed ortholog is 100%.
Bootstrap support for H3H518 as seed ortholog is 100%.

Group of orthologs #2587. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3A662              	100.00%		H3GIG4              	100.00%
Bootstrap support for H3A662 as seed ortholog is 100%.
Bootstrap support for H3GIG4 as seed ortholog is 100%.

Group of orthologs #2588. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3AU07              	100.00%		H3GZ47              	100.00%
Bootstrap support for H3AU07 as seed ortholog is 100%.
Bootstrap support for H3GZ47 as seed ortholog is 100%.

Group of orthologs #2589. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3BDB2              	100.00%		H3GMK3              	100.00%
Bootstrap support for H3BDB2 as seed ortholog is 100%.
Bootstrap support for H3GMK3 as seed ortholog is 100%.

Group of orthologs #2590. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:8

H3AVE9              	100.00%		H3HCT6              	100.00%
Bootstrap support for H3AVE9 as seed ortholog is 100%.
Bootstrap support for H3HCT6 as seed ortholog is 63%.
Alternative seed ortholog is H3GP65 (8 bits away from this cluster)

Group of orthologs #2591. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.ramorum:62

H3B7K8              	100.00%		H3H2V2              	100.00%
Bootstrap support for H3B7K8 as seed ortholog is 100%.
Bootstrap support for H3H2V2 as seed ortholog is 100%.

Group of orthologs #2592. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:61

H3AN02              	100.00%		H3GQH5              	100.00%
                    	       		H3GRT0              	5.67%
                    	       		H3H885              	5.38%
Bootstrap support for H3AN02 as seed ortholog is 100%.
Bootstrap support for H3GQH5 as seed ortholog is 100%.

Group of orthologs #2593. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:61

M3XIG1              	100.00%		H3GT79              	100.00%
                    	       		H3GT83              	37.19%
Bootstrap support for M3XIG1 as seed ortholog is 100%.
Bootstrap support for H3GT79 as seed ortholog is 100%.

Group of orthologs #2594. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:61

H3A7C9              	100.00%		H3GLA5              	100.00%
Bootstrap support for H3A7C9 as seed ortholog is 100%.
Bootstrap support for H3GLA5 as seed ortholog is 100%.

Group of orthologs #2595. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:61

H3AHZ9              	100.00%		H3GL64              	100.00%
Bootstrap support for H3AHZ9 as seed ortholog is 100%.
Bootstrap support for H3GL64 as seed ortholog is 100%.

Group of orthologs #2596. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.ramorum:61

H3B1B1              	100.00%		H3GE15              	100.00%
Bootstrap support for H3B1B1 as seed ortholog is 100%.
Bootstrap support for H3GE15 as seed ortholog is 100%.

Group of orthologs #2597. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:60

H3AL52              	100.00%		H3GUY7              	100.00%
H3AVY0              	15.35%		H3H9K3              	22.79%
H3ALT8              	13.01%		H3GLP2              	22.79%
H2ZRI5              	12.58%		H3H146              	22.79%
H3AIY7              	12.32%		H3GEC5              	22.34%
H3A5J1              	11.54%		H3GNN0              	20.69%
H3B2V5              	11.36%		H3GY50              	16.64%
H3B2L0              	10.49%		H3H5T9              	14.84%
H3AHB1              	10.23%		H3H8T4              	14.54%
H3ASU9              	9.19%		H3GKY9              	11.99%
H3ALU0              	8.85%		H3GFM1              	10.49%
H3A385              	7.89%		H3GGX0              	7.65%
H3AHN9              	7.63%		
H3B6J0              	7.03%		
H3A7R3              	6.76%		
H3B9B0              	6.33%		
H3A6Y5              	6.16%		
H3BGI3              	5.12%		
Bootstrap support for H3AL52 as seed ortholog is 100%.
Bootstrap support for H3GUY7 as seed ortholog is 100%.

Group of orthologs #2598. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.ramorum:60

H3AIU6              	100.00%		H3HEB7              	100.00%
H3BBG7              	60.00%		
Bootstrap support for H3AIU6 as seed ortholog is 100%.
Bootstrap support for H3HEB7 as seed ortholog is 100%.

Group of orthologs #2599. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:59

H3AVU8              	100.00%		H3GHC0              	100.00%
H3AQA6              	79.17%		H3GMU9              	10.35%
H3ADM1              	72.90%		
H2ZY74              	61.94%		
H3A0S7              	57.14%		
H3ACA1              	55.85%		
H2ZW59              	16.04%		
Bootstrap support for H3AVU8 as seed ortholog is 100%.
Bootstrap support for H3GHC0 as seed ortholog is 100%.

Group of orthologs #2600. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:59

H3BFN1              	100.00%		H3H179              	100.00%
                    	       		H3GSF8              	11.15%
Bootstrap support for H3BFN1 as seed ortholog is 100%.
Bootstrap support for H3H179 as seed ortholog is 100%.

Group of orthologs #2601. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:59

H3A5C2              	100.00%		H3GH26              	100.00%
Bootstrap support for H3A5C2 as seed ortholog is 100%.
Bootstrap support for H3GH26 as seed ortholog is 100%.

Group of orthologs #2602. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:59

H2ZW86              	100.00%		H3H2K3              	100.00%
Bootstrap support for H2ZW86 as seed ortholog is 100%.
Bootstrap support for H3H2K3 as seed ortholog is 100%.

Group of orthologs #2603. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:59

H3B3L5              	100.00%		H3GGB4              	100.00%
Bootstrap support for H3B3L5 as seed ortholog is 100%.
Bootstrap support for H3GGB4 as seed ortholog is 100%.

Group of orthologs #2604. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.ramorum:59

H3AYL1              	100.00%		H3GSH4              	100.00%
Bootstrap support for H3AYL1 as seed ortholog is 100%.
Bootstrap support for H3GSH4 as seed ortholog is 100%.

Group of orthologs #2605. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:58

H3AK58              	100.00%		H3HAT1              	100.00%
H3BEI2              	43.89%		
H3AYT6              	40.65%		
Bootstrap support for H3AK58 as seed ortholog is 100%.
Bootstrap support for H3HAT1 as seed ortholog is 100%.

Group of orthologs #2606. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:58

H3AP30              	100.00%		H3GMU5              	100.00%
H3AT33              	19.39%		
Bootstrap support for H3AP30 as seed ortholog is 100%.
Bootstrap support for H3GMU5 as seed ortholog is 100%.

Group of orthologs #2607. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:58

H2ZWN6              	100.00%		H3GTE3              	100.00%
Bootstrap support for H2ZWN6 as seed ortholog is 100%.
Bootstrap support for H3GTE3 as seed ortholog is 100%.

Group of orthologs #2608. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.ramorum:58

M3XJJ6              	100.00%		H3HEF9              	100.00%
Bootstrap support for M3XJJ6 as seed ortholog is 100%.
Bootstrap support for H3HEF9 as seed ortholog is 100%.

Group of orthologs #2609. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H2ZVM0              	100.00%		H3GBR0              	100.00%
H3AJ34              	28.84%		
M3XHD4              	28.04%		
H3B4T1              	27.51%		
H3ABX5              	27.25%		
H3B536              	27.25%		
H3B4T8              	26.98%		
H2ZZF8              	14.02%		
H3ADB7              	13.76%		
H3BGZ6              	12.17%		
H3BBA8              	11.90%		
H3AGA8              	6.35%		
Bootstrap support for H2ZVM0 as seed ortholog is 100%.
Bootstrap support for H3GBR0 as seed ortholog is 100%.

Group of orthologs #2610. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3A3N7              	100.00%		H3GKY8              	100.00%
H3A8W8              	100.00%		H3GZT0              	100.00%
H3ACD2              	84.26%		H3H5M4              	100.00%
H3BFF3              	61.02%		H3GRX1              	83.71%
H3A3Y6              	20.12%		H3GDX8              	25.33%
H3A0L5              	10.79%		H3GWZ2              	14.64%
                    	       		H3H7V2              	12.90%
Bootstrap support for H3A3N7 as seed ortholog is 100%.
Bootstrap support for H3A8W8 as seed ortholog is 100%.
Bootstrap support for H3GKY8 as seed ortholog is 100%.
Bootstrap support for H3GZT0 as seed ortholog is 100%.
Bootstrap support for H3H5M4 as seed ortholog is 100%.

Group of orthologs #2611. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.ramorum:57

H3ANA0              	100.00%		H3GFQ8              	100.00%
H3A7I3              	39.60%		
H3ALH4              	38.20%		
H3ATF6              	37.89%		
M3XIM5              	31.06%		
H3BE49              	30.28%		
M3XH41              	30.28%		
H3AKM4              	19.57%		
Bootstrap support for H3ANA0 as seed ortholog is 54%.
Alternative seed ortholog is H3B8U9 (4 bits away from this cluster)
Bootstrap support for H3GFQ8 as seed ortholog is 100%.

Group of orthologs #2612. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H2ZZ22              	100.00%		H3H8R1              	100.00%
H3B8W8              	24.10%		H3H7A8              	34.27%
                    	       		H3H7A7              	30.22%
                    	       		H3H9E2              	17.76%
Bootstrap support for H2ZZ22 as seed ortholog is 100%.
Bootstrap support for H3H8R1 as seed ortholog is 100%.

Group of orthologs #2613. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3B4V6              	100.00%		H3GZ85              	100.00%
H3AUN6              	65.82%		H3GZ87              	90.12%
                    	       		H3H1F7              	23.86%
Bootstrap support for H3B4V6 as seed ortholog is 100%.
Bootstrap support for H3GZ85 as seed ortholog is 100%.

Group of orthologs #2614. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3BI67              	100.00%		H3GVL5              	100.00%
M3XI57              	41.12%		H3HEA4              	32.71%
H3AQL7              	38.26%		
Bootstrap support for H3BI67 as seed ortholog is 100%.
Bootstrap support for H3GVL5 as seed ortholog is 100%.

Group of orthologs #2615. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3B950              	100.00%		H3HAG5              	100.00%
H3AHA8              	5.29%		H3H3D3              	99.53%
Bootstrap support for H3B950 as seed ortholog is 100%.
Bootstrap support for H3HAG5 as seed ortholog is 100%.

Group of orthologs #2616. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3AFC7              	100.00%		H3GIT3              	100.00%
H3A620              	44.55%		
Bootstrap support for H3AFC7 as seed ortholog is 100%.
Bootstrap support for H3GIT3 as seed ortholog is 100%.

Group of orthologs #2617. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3A0U6              	100.00%		H3GH69              	100.00%
Bootstrap support for H3A0U6 as seed ortholog is 100%.
Bootstrap support for H3GH69 as seed ortholog is 100%.

Group of orthologs #2618. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3AR36              	100.00%		H3GK54              	100.00%
Bootstrap support for H3AR36 as seed ortholog is 100%.
Bootstrap support for H3GK54 as seed ortholog is 100%.

Group of orthologs #2619. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3B3A3              	100.00%		H3GLP9              	100.00%
Bootstrap support for H3B3A3 as seed ortholog is 100%.
Bootstrap support for H3GLP9 as seed ortholog is 100%.

Group of orthologs #2620. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3BGS0              	100.00%		H3GJR8              	100.00%
Bootstrap support for H3BGS0 as seed ortholog is 100%.
Bootstrap support for H3GJR8 as seed ortholog is 100%.

Group of orthologs #2621. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.ramorum:57

H3B8T5              	100.00%		H3GRW1              	100.00%
Bootstrap support for H3B8T5 as seed ortholog is 50%.
Alternative seed ortholog is H3BGW7 (8 bits away from this cluster)
Bootstrap support for H3GRW1 as seed ortholog is 100%.

Group of orthologs #2622. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3BGN8              	100.00%		H3GTH6              	100.00%
Bootstrap support for H3BGN8 as seed ortholog is 100%.
Bootstrap support for H3GTH6 as seed ortholog is 100%.

Group of orthologs #2623. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.ramorum:57

H3AYL3              	100.00%		H3HCJ8              	100.00%
Bootstrap support for H3AYL3 as seed ortholog is 100%.
Bootstrap support for H3HCJ8 as seed ortholog is 100%.

Group of orthologs #2624. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3ABK9              	100.00%		H3GDN3              	100.00%
H3AK68              	31.89%		H3GDN4              	48.77%
                    	       		H3GDN5              	33.33%
Bootstrap support for H3ABK9 as seed ortholog is 100%.
Bootstrap support for H3GDN3 as seed ortholog is 100%.

Group of orthologs #2625. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3APA5              	22.93%		H3GQU0              	100.00%
H3A3E1              	100.00%		H3H4K5              	100.00%
H3BCB4              	13.67%		
Bootstrap support for H3A3E1 as seed ortholog is 100%.
Bootstrap support for H3GQU0 as seed ortholog is 100%.
Bootstrap support for H3H4K5 as seed ortholog is 100%.

Group of orthologs #2626. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3ARS7              	100.00%		H3GJ39              	100.00%
H3A1A3              	49.25%		
H3A5Q7              	11.09%		
H3A9U9              	9.02%		
Bootstrap support for H3ARS7 as seed ortholog is 100%.
Bootstrap support for H3GJ39 as seed ortholog is 100%.

Group of orthologs #2627. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:8

H3BA75              	100.00%		H3GE35              	100.00%
H3BEK3              	25.31%		
H3BER8              	24.38%		
H3A219              	17.50%		
Bootstrap support for H3BA75 as seed ortholog is 100%.
Bootstrap support for H3GE35 as seed ortholog is 60%.
Alternative seed ortholog is H3GAF8 (8 bits away from this cluster)

Group of orthologs #2628. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3AD59              	100.00%		H3GER2              	100.00%
                    	       		H3GER3              	24.02%
                    	       		H3GXY9              	7.64%
Bootstrap support for H3AD59 as seed ortholog is 100%.
Bootstrap support for H3GER2 as seed ortholog is 100%.

Group of orthologs #2629. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.ramorum:56

H3BCI3              	100.00%		H3GR50              	100.00%
                    	       		H3GHU4              	12.26%
Bootstrap support for H3BCI3 as seed ortholog is 67%.
Alternative seed ortholog is H3B1B8 (12 bits away from this cluster)
Bootstrap support for H3GR50 as seed ortholog is 100%.

Group of orthologs #2630. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3A0V9              	100.00%		H3GCH0              	100.00%
Bootstrap support for H3A0V9 as seed ortholog is 100%.
Bootstrap support for H3GCH0 as seed ortholog is 100%.

Group of orthologs #2631. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3AHQ0              	100.00%		H3GH41              	100.00%
Bootstrap support for H3AHQ0 as seed ortholog is 100%.
Bootstrap support for H3GH41 as seed ortholog is 100%.

Group of orthologs #2632. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3AG04              	100.00%		H3GUA3              	100.00%
Bootstrap support for H3AG04 as seed ortholog is 100%.
Bootstrap support for H3GUA3 as seed ortholog is 100%.

Group of orthologs #2633. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3B4Z5              	100.00%		H3H004              	100.00%
Bootstrap support for H3B4Z5 as seed ortholog is 100%.
Bootstrap support for H3H004 as seed ortholog is 100%.

Group of orthologs #2634. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.ramorum:56

H3B045              	100.00%		H3H703              	100.00%
Bootstrap support for H3B045 as seed ortholog is 100%.
Bootstrap support for H3H703 as seed ortholog is 100%.

Group of orthologs #2635. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:55

H2ZVB4              	100.00%		H3GJR3              	100.00%
                    	       		H3GJR2              	36.67%
                    	       		H3GJR1              	35.33%
                    	       		H3GJR4              	34.00%
                    	       		H3GJW3              	20.89%
Bootstrap support for H2ZVB4 as seed ortholog is 100%.
Bootstrap support for H3GJR3 as seed ortholog is 100%.

Group of orthologs #2636. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:55

H2ZZD8              	100.00%		H3GD79              	100.00%
Bootstrap support for H2ZZD8 as seed ortholog is 100%.
Bootstrap support for H3GD79 as seed ortholog is 100%.

Group of orthologs #2637. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.ramorum:55

H3AS62              	100.00%		H3H1F8              	100.00%
Bootstrap support for H3AS62 as seed ortholog is 100%.
Bootstrap support for H3H1F8 as seed ortholog is 100%.

Group of orthologs #2638. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

H3BFU2              	100.00%		H3GKY7              	100.00%
H3BHY2              	42.82%		H3GL07              	6.83%
H3AYJ7              	42.82%		
H3AEQ5              	40.62%		
H3AXU9              	40.32%		
M3XHI8              	39.30%		
H3A2H8              	39.00%		
H3BFW8              	24.63%		
M3XI20              	22.29%		
Bootstrap support for H3BFU2 as seed ortholog is 100%.
Bootstrap support for H3GKY7 as seed ortholog is 100%.

Group of orthologs #2639. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

M3XKE3              	100.00%		H3GYJ9              	100.00%
H3B4T7              	29.52%		
Bootstrap support for M3XKE3 as seed ortholog is 100%.
Bootstrap support for H3GYJ9 as seed ortholog is 100%.

Group of orthologs #2640. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

H2ZRP7              	100.00%		H3GEG1              	100.00%
Bootstrap support for H2ZRP7 as seed ortholog is 100%.
Bootstrap support for H3GEG1 as seed ortholog is 100%.

Group of orthologs #2641. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

H3A9E8              	100.00%		H3GMW3              	100.00%
Bootstrap support for H3A9E8 as seed ortholog is 100%.
Bootstrap support for H3GMW3 as seed ortholog is 100%.

Group of orthologs #2642. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

H3AN86              	100.00%		H3GKE3              	100.00%
Bootstrap support for H3AN86 as seed ortholog is 100%.
Bootstrap support for H3GKE3 as seed ortholog is 100%.

Group of orthologs #2643. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

H3AXC5              	100.00%		H3GGS2              	100.00%
Bootstrap support for H3AXC5 as seed ortholog is 100%.
Bootstrap support for H3GGS2 as seed ortholog is 100%.

Group of orthologs #2644. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.ramorum:54

H3APA4              	100.00%		H3GSV9              	100.00%
Bootstrap support for H3APA4 as seed ortholog is 100%.
Bootstrap support for H3GSV9 as seed ortholog is 100%.

Group of orthologs #2645. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.ramorum:53

H3A0T1              	100.00%		H3GBD3              	100.00%
Bootstrap support for H3A0T1 as seed ortholog is 100%.
Bootstrap support for H3GBD3 as seed ortholog is 100%.

Group of orthologs #2646. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.ramorum:53

H3BDJ2              	100.00%		H3GIB4              	100.00%
Bootstrap support for H3BDJ2 as seed ortholog is 100%.
Bootstrap support for H3GIB4 as seed ortholog is 100%.

Group of orthologs #2647. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.ramorum:53

H3AYD6              	100.00%		H3HBU1              	100.00%
Bootstrap support for H3AYD6 as seed ortholog is 100%.
Bootstrap support for H3HBU1 as seed ortholog is 100%.

Group of orthologs #2648. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:52

H3BF21              	100.00%		H3GS60              	100.00%
H3B0R7              	60.73%		
H3AWV9              	49.39%		
M3XHU6              	38.46%		
Bootstrap support for H3BF21 as seed ortholog is 100%.
Bootstrap support for H3GS60 as seed ortholog is 100%.

Group of orthologs #2649. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:52

H3B836              	100.00%		H3GGJ3              	100.00%
H3BC91              	23.45%		
Bootstrap support for H3B836 as seed ortholog is 100%.
Bootstrap support for H3GGJ3 as seed ortholog is 100%.

Group of orthologs #2650. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:52

H3BHW7              	100.00%		H3GEK3              	100.00%
                    	       		H3GEK1              	88.54%
Bootstrap support for H3BHW7 as seed ortholog is 100%.
Bootstrap support for H3GEK3 as seed ortholog is 100%.

Group of orthologs #2651. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:6

H3AGL0              	100.00%		H3G5N3              	100.00%
Bootstrap support for H3AGL0 as seed ortholog is 100%.
Bootstrap support for H3G5N3 as seed ortholog is 56%.
Alternative seed ortholog is H3GGF3 (6 bits away from this cluster)

Group of orthologs #2652. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:52

H3AM71              	100.00%		H3HAM3              	100.00%
Bootstrap support for H3AM71 as seed ortholog is 100%.
Bootstrap support for H3HAM3 as seed ortholog is 100%.

Group of orthologs #2653. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.ramorum:52

H3B5X2              	100.00%		H3H8V7              	100.00%
Bootstrap support for H3B5X2 as seed ortholog is 100%.
Bootstrap support for H3H8V7 as seed ortholog is 100%.

Group of orthologs #2654. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.ramorum:51

H3ALG1              	100.00%		H3G944              	100.00%
H3A7M8              	100.00%		H3H4F5              	100.00%
H3AR58              	100.00%		H3GMD1              	100.00%
H3BHE7              	61.57%		H3GUW3              	50.00%
H2ZS87              	58.52%		H3GV20              	41.82%
H2ZXG6              	26.20%		H3GG12              	35.64%
H3AAA0              	20.09%		H3GN86              	31.53%
H3A2L4              	19.21%		H3GGV2              	17.00%
Bootstrap support for H3ALG1 as seed ortholog is 60%.
Alternative seed ortholog is H2ZS50 (10 bits away from this cluster)
Bootstrap support for H3A7M8 as seed ortholog is 49%.
Alternative seed ortholog is H2ZS50 (10 bits away from this cluster)
Bootstrap support for H3AR58 as seed ortholog is 56%.
Alternative seed ortholog is H2ZS50 (10 bits away from this cluster)
Bootstrap support for H3G944 as seed ortholog is 100%.
Bootstrap support for H3H4F5 as seed ortholog is 100%.
Bootstrap support for H3GMD1 as seed ortholog is 100%.

Group of orthologs #2655. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:51

H3AG46              	100.00%		H3GIG2              	100.00%
Bootstrap support for H3AG46 as seed ortholog is 100%.
Bootstrap support for H3GIG2 as seed ortholog is 100%.

Group of orthologs #2656. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:51

H3AWJ8              	100.00%		H3GTW2              	100.00%
Bootstrap support for H3AWJ8 as seed ortholog is 100%.
Bootstrap support for H3GTW2 as seed ortholog is 100%.

Group of orthologs #2657. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.ramorum:51

H3BHL6              	100.00%		H3H784              	100.00%
Bootstrap support for H3BHL6 as seed ortholog is 100%.
Bootstrap support for H3H784 as seed ortholog is 100%.

Group of orthologs #2658. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3A2V6              	100.00%		H3GHP1              	100.00%
H3BHB5              	66.09%		
H3ANH0              	61.59%		
H3BF62              	48.96%		
Bootstrap support for H3A2V6 as seed ortholog is 100%.
Bootstrap support for H3GHP1 as seed ortholog is 100%.

Group of orthologs #2659. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:10

H3BHS0              	100.00%		H3GEG0              	100.00%
H3ANJ0              	42.08%		
H3AEP7              	29.08%		
Bootstrap support for H3BHS0 as seed ortholog is 100%.
Bootstrap support for H3GEG0 as seed ortholog is 61%.
Alternative seed ortholog is H3H122 (10 bits away from this cluster)

Group of orthologs #2660. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3BHW2              	100.00%		H3GMX0              	100.00%
H3B3D9              	54.61%		
H3A2I4              	47.01%		
Bootstrap support for H3BHW2 as seed ortholog is 100%.
Bootstrap support for H3GMX0 as seed ortholog is 100%.

Group of orthologs #2661. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3B8K1              	100.00%		H3H129              	100.00%
H3AMN4              	5.31%		
Bootstrap support for H3B8K1 as seed ortholog is 100%.
Bootstrap support for H3H129 as seed ortholog is 100%.

Group of orthologs #2662. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H2ZXW8              	100.00%		H3GJJ5              	100.00%
Bootstrap support for H2ZXW8 as seed ortholog is 100%.
Bootstrap support for H3GJJ5 as seed ortholog is 100%.

Group of orthologs #2663. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3A8F7              	100.00%		H3GH34              	100.00%
Bootstrap support for H3A8F7 as seed ortholog is 100%.
Bootstrap support for H3GH34 as seed ortholog is 100%.

Group of orthologs #2664. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3AWS5              	100.00%		H3GHB5              	100.00%
Bootstrap support for H3AWS5 as seed ortholog is 100%.
Bootstrap support for H3GHB5 as seed ortholog is 100%.

Group of orthologs #2665. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3AKT1              	100.00%		H3H303              	100.00%
Bootstrap support for H3AKT1 as seed ortholog is 100%.
Bootstrap support for H3H303 as seed ortholog is 100%.

Group of orthologs #2666. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3ATV6              	100.00%		H3HBM3              	100.00%
Bootstrap support for H3ATV6 as seed ortholog is 100%.
Bootstrap support for H3HBM3 as seed ortholog is 100%.

Group of orthologs #2667. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

H3B432              	100.00%		H3H3B7              	100.00%
Bootstrap support for H3B432 as seed ortholog is 100%.
Bootstrap support for H3H3B7 as seed ortholog is 100%.

Group of orthologs #2668. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.ramorum:50

M3XHW8              	100.00%		H3H4J8              	100.00%
Bootstrap support for M3XHW8 as seed ortholog is 100%.
Bootstrap support for H3H4J8 as seed ortholog is 100%.

Group of orthologs #2669. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:49

M3XGZ2              	100.00%		H3H1U8              	100.00%
M3XKR7              	7.93%		H3G593              	25.34%
                    	       		H3H2Y7              	23.11%
                    	       		H3G5P9              	22.37%
                    	       		H3H2Y8              	22.13%
                    	       		H3GVW9              	6.67%
Bootstrap support for M3XGZ2 as seed ortholog is 100%.
Bootstrap support for H3H1U8 as seed ortholog is 100%.

Group of orthologs #2670. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:49

H3B3U2              	100.00%		H3H8B3              	100.00%
H3AK12              	92.22%		H3GE02              	8.65%
                    	       		H3H7R6              	7.50%
                    	       		H3GUK0              	7.01%
Bootstrap support for H3B3U2 as seed ortholog is 100%.
Bootstrap support for H3H8B3 as seed ortholog is 100%.

Group of orthologs #2671. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:49

H3ANA9              	100.00%		H3HEA0              	100.00%
H3BC29              	37.32%		
Bootstrap support for H3ANA9 as seed ortholog is 100%.
Bootstrap support for H3HEA0 as seed ortholog is 100%.

Group of orthologs #2672. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:49

H2ZTZ5              	100.00%		H3H305              	100.00%
Bootstrap support for H2ZTZ5 as seed ortholog is 100%.
Bootstrap support for H3H305 as seed ortholog is 100%.

Group of orthologs #2673. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:49

H3AFP1              	100.00%		H3HDN9              	100.00%
Bootstrap support for H3AFP1 as seed ortholog is 100%.
Bootstrap support for H3HDN9 as seed ortholog is 100%.

Group of orthologs #2674. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.ramorum:49

H3BEU6              	100.00%		H3HCB0              	100.00%
Bootstrap support for H3BEU6 as seed ortholog is 100%.
Bootstrap support for H3HCB0 as seed ortholog is 100%.

Group of orthologs #2675. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:6

H2ZUY3              	100.00%		H3HBX8              	100.00%
H3ARD6              	31.59%		
H3B3J9              	19.90%		
Bootstrap support for H2ZUY3 as seed ortholog is 100%.
Bootstrap support for H3HBX8 as seed ortholog is 59%.
Alternative seed ortholog is H3GGJ4 (6 bits away from this cluster)

Group of orthologs #2676. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:48

H3A0D7              	100.00%		H3GKK3              	100.00%
Bootstrap support for H3A0D7 as seed ortholog is 100%.
Bootstrap support for H3GKK3 as seed ortholog is 100%.

Group of orthologs #2677. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:48

H2ZT34              	100.00%		H3GVA7              	100.00%
Bootstrap support for H2ZT34 as seed ortholog is 100%.
Bootstrap support for H3GVA7 as seed ortholog is 100%.

Group of orthologs #2678. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.ramorum:48

M3XJA9              	100.00%		H3HDX8              	100.00%
Bootstrap support for M3XJA9 as seed ortholog is 100%.
Bootstrap support for H3HDX8 as seed ortholog is 100%.

Group of orthologs #2679. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:47

H3B5W4              	100.00%		H3GPM9              	100.00%
H2ZYQ1              	88.68%		H3G9C9              	88.68%
H3B190              	87.57%		H3G9W0              	60.75%
H3BF79              	85.34%		H3G5W4              	50.94%
H3A326              	72.17%		H3GQV4              	23.77%
H3B6H3              	55.84%		
H3APJ1              	16.88%		
Bootstrap support for H3B5W4 as seed ortholog is 100%.
Bootstrap support for H3GPM9 as seed ortholog is 100%.

Group of orthologs #2680. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:47

H3A9L7              	100.00%		H3GET5              	100.00%
H3B2X8              	42.29%		
M3XHU9              	41.25%		
H3ARH0              	32.50%		
H3A7D0              	21.04%		
H3BHM0              	5.62%		
Bootstrap support for H3A9L7 as seed ortholog is 100%.
Bootstrap support for H3GET5 as seed ortholog is 100%.

Group of orthologs #2681. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:47

H3ALD8              	100.00%		H3GN46              	100.00%
                    	       		H3GN47              	19.71%
Bootstrap support for H3ALD8 as seed ortholog is 100%.
Bootstrap support for H3GN46 as seed ortholog is 100%.

Group of orthologs #2682. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:47

H3AUK3              	100.00%		H3GH15              	100.00%
H3A888              	53.19%		
Bootstrap support for H3AUK3 as seed ortholog is 100%.
Bootstrap support for H3GH15 as seed ortholog is 100%.

Group of orthologs #2683. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:47

H3B1M7              	100.00%		H3GRS5              	100.00%
Bootstrap support for H3B1M7 as seed ortholog is 100%.
Bootstrap support for H3GRS5 as seed ortholog is 100%.

Group of orthologs #2684. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.ramorum:47

H3BFM9              	100.00%		H3GH19              	100.00%
Bootstrap support for H3BFM9 as seed ortholog is 100%.
Bootstrap support for H3GH19 as seed ortholog is 100%.

Group of orthologs #2685. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.ramorum:46

H3BA76              	100.00%		H3GT50              	100.00%
H2ZVX5              	37.21%		H3GT23              	13.42%
H3BHP2              	15.10%		
Bootstrap support for H3BA76 as seed ortholog is 100%.
Bootstrap support for H3GT50 as seed ortholog is 100%.

Group of orthologs #2686. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.ramorum:46

H3BFW4              	100.00%		H3HCM4              	100.00%
H3AIK8              	45.79%		
H2ZVR2              	39.47%		
H2ZTX9              	33.16%		
Bootstrap support for H3BFW4 as seed ortholog is 100%.
Bootstrap support for H3HCM4 as seed ortholog is 100%.

Group of orthologs #2687. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.ramorum:46

H3BF47              	100.00%		H3G5F7              	100.00%
H3BH27              	100.00%		
Bootstrap support for H3BF47 as seed ortholog is 100%.
Bootstrap support for H3BH27 as seed ortholog is 100%.
Bootstrap support for H3G5F7 as seed ortholog is 100%.

Group of orthologs #2688. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.ramorum:46

H3A479              	100.00%		H3HEC2              	100.00%
Bootstrap support for H3A479 as seed ortholog is 100%.
Bootstrap support for H3HEC2 as seed ortholog is 100%.

Group of orthologs #2689. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.ramorum:46

H3ASK8              	100.00%		H3H391              	100.00%
Bootstrap support for H3ASK8 as seed ortholog is 100%.
Bootstrap support for H3H391 as seed ortholog is 100%.

Group of orthologs #2690. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3ARB7              	100.00%		H3H371              	100.00%
H3A474              	44.11%		
H3B4U9              	8.77%		
Bootstrap support for H3ARB7 as seed ortholog is 100%.
Bootstrap support for H3H371 as seed ortholog is 100%.

Group of orthologs #2691. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3AZY8              	100.00%		H3H1S0              	100.00%
M3XIM6              	28.75%		
Bootstrap support for H3AZY8 as seed ortholog is 100%.
Bootstrap support for H3H1S0 as seed ortholog is 100%.

Group of orthologs #2692. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H2ZTZ7              	100.00%		H3GC67              	100.00%
Bootstrap support for H2ZTZ7 as seed ortholog is 100%.
Bootstrap support for H3GC67 as seed ortholog is 100%.

Group of orthologs #2693. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3ABS3              	100.00%		H3GED9              	100.00%
Bootstrap support for H3ABS3 as seed ortholog is 100%.
Bootstrap support for H3GED9 as seed ortholog is 100%.

Group of orthologs #2694. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3ABN6              	100.00%		H3GI70              	100.00%
Bootstrap support for H3ABN6 as seed ortholog is 100%.
Bootstrap support for H3GI70 as seed ortholog is 100%.

Group of orthologs #2695. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3AZI7              	100.00%		H3GGV6              	100.00%
Bootstrap support for H3AZI7 as seed ortholog is 100%.
Bootstrap support for H3GGV6 as seed ortholog is 100%.

Group of orthologs #2696. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3AUR3              	100.00%		H3GXK3              	100.00%
Bootstrap support for H3AUR3 as seed ortholog is 100%.
Bootstrap support for H3GXK3 as seed ortholog is 100%.

Group of orthologs #2697. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3BHM1              	100.00%		H3GHX8              	100.00%
Bootstrap support for H3BHM1 as seed ortholog is 100%.
Bootstrap support for H3GHX8 as seed ortholog is 100%.

Group of orthologs #2698. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3B4C8              	100.00%		H3H6Y5              	100.00%
Bootstrap support for H3B4C8 as seed ortholog is 100%.
Bootstrap support for H3H6Y5 as seed ortholog is 100%.

Group of orthologs #2699. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.ramorum:45

H3BDW5              	100.00%		H3H6Q9              	100.00%
Bootstrap support for H3BDW5 as seed ortholog is 100%.
Bootstrap support for H3H6Q9 as seed ortholog is 100%.

Group of orthologs #2700. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.ramorum:44

H3AUA1              	100.00%		H3GBU6              	100.00%
H3AJN2              	34.45%		
Bootstrap support for H3AUA1 as seed ortholog is 100%.
Bootstrap support for H3GBU6 as seed ortholog is 100%.

Group of orthologs #2701. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.ramorum:44

H3BI97              	100.00%		H3GEI2              	100.00%
Bootstrap support for H3BI97 as seed ortholog is 100%.
Bootstrap support for H3GEI2 as seed ortholog is 100%.

Group of orthologs #2702. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.ramorum:43

H3AUI1              	100.00%		H3GQL3              	100.00%
Bootstrap support for H3AUI1 as seed ortholog is 100%.
Bootstrap support for H3GQL3 as seed ortholog is 100%.

Group of orthologs #2703. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:42

H2ZSB4              	100.00%		H3GCX5              	100.00%
Bootstrap support for H2ZSB4 as seed ortholog is 100%.
Bootstrap support for H3GCX5 as seed ortholog is 100%.

Group of orthologs #2704. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.ramorum:42

H3B851              	100.00%		H3GGM1              	100.00%
Bootstrap support for H3B851 as seed ortholog is 100%.
Bootstrap support for H3GGM1 as seed ortholog is 100%.

Group of orthologs #2705. Best score 41 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.ramorum:41

H3A765              	100.00%		H3GW67              	100.00%
H3B0S2              	51.02%		H3GBF4              	13.14%
Bootstrap support for H3A765 as seed ortholog is 100%.
Bootstrap support for H3GW67 as seed ortholog is 100%.

Group of orthologs #2706. Best score 41 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.ramorum:41

H3AZ95              	100.00%		H3G6P0              	100.00%
Bootstrap support for H3AZ95 as seed ortholog is 100%.
Bootstrap support for H3G6P0 as seed ortholog is 100%.

Group of orthologs #2707. Best score 41 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.ramorum:41

H3AAK3              	100.00%		H3H6Q4              	100.00%
Bootstrap support for H3AAK3 as seed ortholog is 100%.
Bootstrap support for H3H6Q4 as seed ortholog is 100%.

Group of orthologs #2708. Best score 40 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.ramorum:40

H3AS38              	100.00%		H3GGP4              	100.00%
H3AER5              	28.57%		H3GGP3              	53.00%
H3AN96              	22.34%		H3HBB7              	49.47%
                    	       		H3HAL6              	23.67%
                    	       		H3GKW8              	19.79%
Bootstrap support for H3AS38 as seed ortholog is 100%.
Bootstrap support for H3GGP4 as seed ortholog is 100%.