###################################
167 groups of orthologs
170 in-paralogs from C.trachomatis
490 in-paralogs from T.thermophila
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 822 bits
Score difference with first non-orthologous sequence - C.trachomatis:822 T.thermophila:717

O84022              	100.00%		I7M3D3              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for I7M3D3 as seed ortholog is 100%.

Group of orthologs #2. Best score 744 bits
Score difference with first non-orthologous sequence - C.trachomatis:744 T.thermophila:744

O84250              	100.00%		Q247W0              	100.00%
                    	       		Q23GD4              	45.06%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for Q247W0 as seed ortholog is 100%.

Group of orthologs #3. Best score 630 bits
Score difference with first non-orthologous sequence - C.trachomatis:630 T.thermophila:104

P17821              	100.00%		Q22CW1              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for Q22CW1 as seed ortholog is 99%.

Group of orthologs #4. Best score 579 bits
Score difference with first non-orthologous sequence - C.trachomatis:401 T.thermophila:267

P0C0Z7              	100.00%		Q23JZ7              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for Q23JZ7 as seed ortholog is 100%.

Group of orthologs #5. Best score 544 bits
Score difference with first non-orthologous sequence - C.trachomatis:544 T.thermophila:458

O84304              	100.00%		I7M6K5              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for I7M6K5 as seed ortholog is 100%.

Group of orthologs #6. Best score 517 bits
Score difference with first non-orthologous sequence - C.trachomatis:517 T.thermophila:395

O84067              	100.00%		I7MLS1              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for I7MLS1 as seed ortholog is 100%.

Group of orthologs #7. Best score 507 bits
Score difference with first non-orthologous sequence - C.trachomatis:507 T.thermophila:24

O84444              	100.00%		Q22AK9              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for Q22AK9 as seed ortholog is 68%.
Alternative seed ortholog is Q24BY4 (24 bits away from this cluster)

Group of orthologs #8. Best score 485 bits
Score difference with first non-orthologous sequence - C.trachomatis:485 T.thermophila:485

O84585              	100.00%		Q23K70              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for Q23K70 as seed ortholog is 100%.

Group of orthologs #9. Best score 480 bits
Score difference with first non-orthologous sequence - C.trachomatis:480 T.thermophila:134

O84348              	100.00%		I7MCQ7              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for I7MCQ7 as seed ortholog is 99%.

Group of orthologs #10. Best score 479 bits
Score difference with first non-orthologous sequence - C.trachomatis:479 T.thermophila:479

O84057              	100.00%		Q23KH1              	100.00%
                    	       		I7M7R4              	29.29%
                    	       		Q23MM6              	5.22%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for Q23KH1 as seed ortholog is 100%.

Group of orthologs #11. Best score 470 bits
Score difference with first non-orthologous sequence - C.trachomatis:470 T.thermophila:470

P0CD73              	100.00%		I7M0Y2              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for I7M0Y2 as seed ortholog is 100%.

Group of orthologs #12. Best score 441 bits
Score difference with first non-orthologous sequence - C.trachomatis:441 T.thermophila:441

O84863              	100.00%		Q229Z2              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for Q229Z2 as seed ortholog is 100%.

Group of orthologs #13. Best score 437 bits
Score difference with first non-orthologous sequence - C.trachomatis:437 T.thermophila:437

O84211              	100.00%		Q248E5              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for Q248E5 as seed ortholog is 100%.

Group of orthologs #14. Best score 418 bits
Score difference with first non-orthologous sequence - C.trachomatis:418 T.thermophila:418

O84848              	100.00%		Q22NW7              	100.00%
                    	       		I7MAA8              	30.04%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for Q22NW7 as seed ortholog is 100%.

Group of orthologs #15. Best score 392 bits
Score difference with first non-orthologous sequence - C.trachomatis:392 T.thermophila:392

O84831              	100.00%		Q22EI4              	100.00%
                    	       		Q23UG8              	8.45%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for Q22EI4 as seed ortholog is 100%.

Group of orthologs #16. Best score 390 bits
Score difference with first non-orthologous sequence - C.trachomatis:390 T.thermophila:390

O84126              	100.00%		I7LWK0              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for I7LWK0 as seed ortholog is 100%.

Group of orthologs #17. Best score 371 bits
Score difference with first non-orthologous sequence - C.trachomatis:371 T.thermophila:371

Q59321              	100.00%		I7MM56              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for I7MM56 as seed ortholog is 100%.

Group of orthologs #18. Best score 365 bits
Score difference with first non-orthologous sequence - C.trachomatis:365 T.thermophila:365

O84460              	100.00%		I7LX53              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for I7LX53 as seed ortholog is 100%.

Group of orthologs #19. Best score 361 bits
Score difference with first non-orthologous sequence - C.trachomatis:361 T.thermophila:361

P0CE13              	100.00%		Q22UL2              	100.00%
                    	       		Q22UK6              	69.33%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for Q22UL2 as seed ortholog is 100%.

Group of orthologs #20. Best score 355 bits
Score difference with first non-orthologous sequence - C.trachomatis:355 T.thermophila:194

P0CD71              	100.00%		I7MGI2              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for I7MGI2 as seed ortholog is 99%.

Group of orthologs #21. Best score 353 bits
Score difference with first non-orthologous sequence - C.trachomatis:353 T.thermophila:353

O84591              	100.00%		Q23DP3              	100.00%
                    	       		I7MGI5              	39.18%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for Q23DP3 as seed ortholog is 100%.

Group of orthologs #22. Best score 347 bits
Score difference with first non-orthologous sequence - C.trachomatis:347 T.thermophila:347

O84310              	100.00%		I7MK09              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for I7MK09 as seed ortholog is 100%.

Group of orthologs #23. Best score 327 bits
Score difference with first non-orthologous sequence - C.trachomatis:327 T.thermophila:327

O84829              	100.00%		I7LTY1              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for I7LTY1 as seed ortholog is 100%.

Group of orthologs #24. Best score 315 bits
Score difference with first non-orthologous sequence - C.trachomatis:315 T.thermophila:100

O84248              	100.00%		Q23JH9              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for Q23JH9 as seed ortholog is 99%.

Group of orthologs #25. Best score 313 bits
Score difference with first non-orthologous sequence - C.trachomatis:313 T.thermophila:133

O84561              	100.00%		Q23DV6              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for Q23DV6 as seed ortholog is 99%.

Group of orthologs #26. Best score 308 bits
Score difference with first non-orthologous sequence - C.trachomatis:308 T.thermophila:308

O84786              	100.00%		I7LT60              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for I7LT60 as seed ortholog is 100%.

Group of orthologs #27. Best score 299 bits
Score difference with first non-orthologous sequence - C.trachomatis:299 T.thermophila:299

P0CD78              	100.00%		Q24CJ7              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for Q24CJ7 as seed ortholog is 100%.

Group of orthologs #28. Best score 295 bits
Score difference with first non-orthologous sequence - C.trachomatis:295 T.thermophila:135

P0CE21              	100.00%		Q22Z06              	100.00%
                    	       		I7LUC0              	27.50%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for Q22Z06 as seed ortholog is 99%.

Group of orthologs #29. Best score 292 bits
Score difference with first non-orthologous sequence - C.trachomatis:292 T.thermophila:70

O84797              	100.00%		Q23K54              	100.00%
                    	       		Q23AD6              	20.43%
                    	       		I7MDR6              	11.04%
                    	       		I7MGE9              	10.12%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for Q23K54 as seed ortholog is 87%.

Group of orthologs #30. Best score 284 bits
Score difference with first non-orthologous sequence - C.trachomatis:284 T.thermophila:173

O84035              	100.00%		Q24DM0              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for Q24DM0 as seed ortholog is 99%.

Group of orthologs #31. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 T.thermophila:277

O84315              	100.00%		Q23DV2              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for Q23DV2 as seed ortholog is 100%.

Group of orthologs #32. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:275 T.thermophila:275

O84065              	100.00%		I7LXB8              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for I7LXB8 as seed ortholog is 100%.

Group of orthologs #33. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:275 T.thermophila:165

O84451              	100.00%		I7M034              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for I7M034 as seed ortholog is 99%.

Group of orthologs #34. Best score 267 bits
Score difference with first non-orthologous sequence - C.trachomatis:267 T.thermophila:137

O84098              	100.00%		Q239N3              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for Q239N3 as seed ortholog is 99%.

Group of orthologs #35. Best score 260 bits
Score difference with first non-orthologous sequence - C.trachomatis:260 T.thermophila:38

O84381              	100.00%		I7MIK7              	100.00%
                    	       		Q22MV4              	16.34%
                    	       		Q23CW4              	14.79%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for I7MIK7 as seed ortholog is 88%.

Group of orthologs #36. Best score 258 bits
Score difference with first non-orthologous sequence - C.trachomatis:258 T.thermophila:258

P0CE09              	100.00%		Q236N3              	100.00%
                    	       		Q23G41              	14.41%
                    	       		Q22C62              	6.19%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for Q236N3 as seed ortholog is 100%.

Group of orthologs #37. Best score 258 bits
Score difference with first non-orthologous sequence - C.trachomatis:258 T.thermophila:258

O84828              	100.00%		I7M8A6              	100.00%
                    	       		Q23FR1              	51.13%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for I7M8A6 as seed ortholog is 100%.

Group of orthologs #38. Best score 258 bits
Score difference with first non-orthologous sequence - C.trachomatis:258 T.thermophila:258

O84823              	100.00%		Q22XS4              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for Q22XS4 as seed ortholog is 100%.

Group of orthologs #39. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:255 T.thermophila:255

O84316              	100.00%		I7MHL5              	100.00%
                    	       		Q23DD6              	8.14%
                    	       		Q22M85              	7.66%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for I7MHL5 as seed ortholog is 100%.

Group of orthologs #40. Best score 253 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 T.thermophila:253

O84094              	100.00%		I7MIE8              	100.00%
                    	       		I7LUN5              	22.22%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for I7MIE8 as seed ortholog is 100%.

Group of orthologs #41. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:248 T.thermophila:248

O84439              	100.00%		Q23PT8              	100.00%
                    	       		Q23KJ4              	30.65%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for Q23PT8 as seed ortholog is 100%.

Group of orthologs #42. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 T.thermophila:143

O84058              	100.00%		Q234F3              	100.00%
Bootstrap support for O84058 as seed ortholog is 98%.
Bootstrap support for Q234F3 as seed ortholog is 99%.

Group of orthologs #43. Best score 245 bits
Score difference with first non-orthologous sequence - C.trachomatis:245 T.thermophila:245

P0CD72              	100.00%		Q22B85              	100.00%
                    	       		Q22B87              	28.43%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for Q22B85 as seed ortholog is 100%.

Group of orthologs #44. Best score 244 bits
Score difference with first non-orthologous sequence - C.trachomatis:244 T.thermophila:244

O84787              	100.00%		I7LU51              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for I7LU51 as seed ortholog is 100%.

Group of orthologs #45. Best score 243 bits
Score difference with first non-orthologous sequence - C.trachomatis:243 T.thermophila:243

O84642              	100.00%		I7LV29              	100.00%
                    	       		Q23JV0              	20.07%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for I7LV29 as seed ortholog is 100%.

Group of orthologs #46. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 T.thermophila:240

O84775              	100.00%		I7MJQ6              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for I7MJQ6 as seed ortholog is 100%.

Group of orthologs #47. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 T.thermophila:240

O84026              	100.00%		Q22RW5              	100.00%
Bootstrap support for O84026 as seed ortholog is 99%.
Bootstrap support for Q22RW5 as seed ortholog is 100%.

Group of orthologs #48. Best score 235 bits
Score difference with first non-orthologous sequence - C.trachomatis:235 T.thermophila:140

O84352              	100.00%		C0NA16              	100.00%
                    	       		Q22CX4              	34.75%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for C0NA16 as seed ortholog is 99%.

Group of orthologs #49. Best score 231 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 T.thermophila:102

O84249              	100.00%		I7LZY0              	100.00%
Bootstrap support for O84249 as seed ortholog is 97%.
Bootstrap support for I7LZY0 as seed ortholog is 98%.

Group of orthologs #50. Best score 230 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 T.thermophila:230

O84028              	100.00%		I7M1Z0              	100.00%
                    	       		I7LU88              	44.23%
Bootstrap support for O84028 as seed ortholog is 99%.
Bootstrap support for I7M1Z0 as seed ortholog is 100%.

Group of orthologs #51. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 T.thermophila:104

O84812              	100.00%		Q22DP0              	100.00%
                    	       		I7MIG3              	32.21%
                    	       		Q22B82              	25.17%
                    	       		Q234R9              	24.55%
                    	       		I7MIE6              	24.42%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for Q22DP0 as seed ortholog is 98%.

Group of orthologs #52. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 T.thermophila:158

O84309              	100.00%		I7M6E0              	100.00%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for I7M6E0 as seed ortholog is 99%.

Group of orthologs #53. Best score 224 bits
Score difference with first non-orthologous sequence - C.trachomatis:224 T.thermophila:224

O84373              	100.00%		Q23FV7              	100.00%
Bootstrap support for O84373 as seed ortholog is 100%.
Bootstrap support for Q23FV7 as seed ortholog is 100%.

Group of orthologs #54. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 T.thermophila:220

O84596              	100.00%		Q23DI3              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for Q23DI3 as seed ortholog is 100%.

Group of orthologs #55. Best score 216 bits
Score difference with first non-orthologous sequence - C.trachomatis:216 T.thermophila:216

O84049              	100.00%		Q22U45              	100.00%
                    	       		I7MH91              	10.22%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for Q22U45 as seed ortholog is 100%.

Group of orthologs #56. Best score 216 bits
Score difference with first non-orthologous sequence - C.trachomatis:216 T.thermophila:216

O84423              	100.00%		I7MG56              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for I7MG56 as seed ortholog is 100%.

Group of orthologs #57. Best score 214 bits
Score difference with first non-orthologous sequence - C.trachomatis:214 T.thermophila:39

O84345              	100.00%		I7MG84              	100.00%
                    	       		I7M3A9              	7.16%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for I7MG84 as seed ortholog is 80%.

Group of orthologs #58. Best score 213 bits
Score difference with first non-orthologous sequence - C.trachomatis:213 T.thermophila:213

O84638              	100.00%		Q22HL3              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for Q22HL3 as seed ortholog is 100%.

Group of orthologs #59. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 T.thermophila:63

O84266              	100.00%		Q22UN4              	100.00%
                    	       		Q22UN5              	75.43%
                    	       		Q23PT3              	25.61%
                    	       		I7M6Q4              	20.57%
                    	       		I7LTZ5              	10.59%
                    	       		I7MFC6              	8.25%
                    	       		I7MKK2              	8.25%
                    	       		I7LXH0              	7.55%
                    	       		I7M9L6              	6.16%
                    	       		Q23AM3              	5.21%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for Q22UN4 as seed ortholog is 93%.

Group of orthologs #60. Best score 195 bits
Score difference with first non-orthologous sequence - C.trachomatis:195 T.thermophila:195

O84296              	100.00%		Q22XW4              	100.00%
                    	       		Q22XW3              	87.65%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for Q22XW4 as seed ortholog is 100%.

Group of orthologs #61. Best score 189 bits
Score difference with first non-orthologous sequence - C.trachomatis:189 T.thermophila:189

O84859              	100.00%		I7M699              	100.00%
                    	       		Q22RC8              	7.44%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for I7M699 as seed ortholog is 100%.

Group of orthologs #62. Best score 189 bits
Score difference with first non-orthologous sequence - C.trachomatis:189 T.thermophila:189

O84196              	100.00%		I7M3D8              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for I7M3D8 as seed ortholog is 100%.

Group of orthologs #63. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 T.thermophila:183

O84547              	100.00%		I7ME12              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for I7ME12 as seed ortholog is 100%.

Group of orthologs #64. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 T.thermophila:183

O84734              	100.00%		Q22Z34              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for Q22Z34 as seed ortholog is 100%.

Group of orthologs #65. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 T.thermophila:180

O84608              	100.00%		Q22F16              	100.00%
                    	       		Q22AJ2              	45.21%
                    	       		I7LUE6              	18.49%
                    	       		Q22G04              	12.67%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for Q22F16 as seed ortholog is 100%.

Group of orthologs #66. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 T.thermophila:177

O84704              	100.00%		I7MAY8              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for I7MAY8 as seed ortholog is 100%.

Group of orthologs #67. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 T.thermophila:177

O84755              	100.00%		Q22ZB6              	100.00%
Bootstrap support for O84755 as seed ortholog is 93%.
Bootstrap support for Q22ZB6 as seed ortholog is 100%.

Group of orthologs #68. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 T.thermophila:32

O84676              	100.00%		I7LZV1              	100.00%
O84722              	10.91%		
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for I7LZV1 as seed ortholog is 77%.

Group of orthologs #69. Best score 172 bits
Score difference with first non-orthologous sequence - C.trachomatis:172 T.thermophila:172

O84081              	100.00%		I7M1R4              	100.00%
                    	       		I7MHI6              	11.02%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for I7M1R4 as seed ortholog is 100%.

Group of orthologs #70. Best score 172 bits
Score difference with first non-orthologous sequence - C.trachomatis:172 T.thermophila:172

O84402              	100.00%		Q23DE7              	100.00%
                    	       		I7MKZ5              	5.39%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for Q23DE7 as seed ortholog is 100%.

Group of orthologs #71. Best score 169 bits
Score difference with first non-orthologous sequence - C.trachomatis:169 T.thermophila:169

O84727              	100.00%		Q24HX6              	100.00%
                    	       		Q23F09              	40.96%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for Q24HX6 as seed ortholog is 100%.

Group of orthologs #72. Best score 169 bits
Score difference with first non-orthologous sequence - C.trachomatis:169 T.thermophila:169

O84709              	100.00%		A4VCU9              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for A4VCU9 as seed ortholog is 100%.

Group of orthologs #73. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:168 T.thermophila:168

O84332              	100.00%		Q22T89              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for Q22T89 as seed ortholog is 100%.

Group of orthologs #74. Best score 162 bits
Score difference with first non-orthologous sequence - C.trachomatis:162 T.thermophila:73

O84247              	100.00%		Q23KL2              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for Q23KL2 as seed ortholog is 98%.

Group of orthologs #75. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 T.thermophila:110

O84720              	100.00%		Q22GF6              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for Q22GF6 as seed ortholog is 99%.

Group of orthologs #76. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 T.thermophila:161

O84613              	100.00%		Q23W06              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for Q23W06 as seed ortholog is 100%.

Group of orthologs #77. Best score 157 bits
Score difference with first non-orthologous sequence - C.trachomatis:157 T.thermophila:157

O84874              	100.00%		Q229D4              	100.00%
                    	       		Q23TC5              	24.24%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for Q229D4 as seed ortholog is 100%.

Group of orthologs #78. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 T.thermophila:91

O84557              	100.00%		I7M9J8              	100.00%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for I7M9J8 as seed ortholog is 99%.

Group of orthologs #79. Best score 147 bits
Score difference with first non-orthologous sequence - C.trachomatis:147 T.thermophila:147

O84123              	100.00%		I7MLR3              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for I7MLR3 as seed ortholog is 100%.

Group of orthologs #80. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 T.thermophila:143

O84835              	100.00%		I7M416              	100.00%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for I7M416 as seed ortholog is 100%.

Group of orthologs #81. Best score 142 bits
Score difference with first non-orthologous sequence - C.trachomatis:142 T.thermophila:30

O84732              	100.00%		Q23EX6              	100.00%
                    	       		Q23D88              	50.24%
                    	       		I7MHE1              	48.81%
                    	       		I7M7R6              	48.07%
                    	       		Q22LQ9              	47.99%
                    	       		I7MH18              	47.94%
                    	       		Q23ZA6              	47.56%
                    	       		I7MD85              	47.43%
                    	       		Q245Y8              	46.78%
                    	       		Q22P96              	46.43%
                    	       		I7M7N1              	45.26%
                    	       		I7ME52              	45.05%
                    	       		Q22PA2              	44.74%
                    	       		Q23ZA9              	35.22%
                    	       		Q22XZ1              	30.98%
                    	       		I7LXP3              	15.06%
                    	       		I7ME76              	14.71%
                    	       		Q23CL5              	14.58%
                    	       		Q23CL4              	13.89%
                    	       		Q23CL6              	11.60%
                    	       		Q240K5              	9.91%
                    	       		Q22BT1              	8.70%
                    	       		I7ME36              	6.58%
                    	       		I7M7L6              	6.01%
                    	       		I7LXX3              	5.97%
                    	       		I7ME85              	5.84%
                    	       		I7LT23              	5.54%
                    	       		Q23RI2              	5.54%
                    	       		I7MMM2              	5.41%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for Q23EX6 as seed ortholog is 74%.
Alternative seed ortholog is I7LZW5 (30 bits away from this cluster)

Group of orthologs #82. Best score 140 bits
Score difference with first non-orthologous sequence - C.trachomatis:140 T.thermophila:140

O84320              	100.00%		Q22CC9              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for Q22CC9 as seed ortholog is 100%.

Group of orthologs #83. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 T.thermophila:136

O84055              	100.00%		Q22Z99              	100.00%
Bootstrap support for O84055 as seed ortholog is 88%.
Bootstrap support for Q22Z99 as seed ortholog is 100%.

Group of orthologs #84. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 T.thermophila:65

O84154              	100.00%		Q22Z01              	100.00%
                    	       		I7MIQ7              	20.78%
Bootstrap support for O84154 as seed ortholog is 89%.
Bootstrap support for Q22Z01 as seed ortholog is 97%.

Group of orthologs #85. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 T.thermophila:135

O84456              	100.00%		Q246A4              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for Q246A4 as seed ortholog is 100%.

Group of orthologs #86. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 T.thermophila:5

P38004              	100.00%		Q22HF8              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for Q22HF8 as seed ortholog is 40%.
Alternative seed ortholog is Q22RI1 (5 bits away from this cluster)

Group of orthologs #87. Best score 130 bits
Score difference with first non-orthologous sequence - C.trachomatis:130 T.thermophila:130

O84234              	100.00%		I7MB40              	100.00%
                    	       		I7MMZ3              	57.12%
                    	       		I7MKU2              	35.34%
Bootstrap support for O84234 as seed ortholog is 100%.
Bootstrap support for I7MB40 as seed ortholog is 100%.

Group of orthologs #88. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 T.thermophila:128

O84033              	100.00%		I7MMN2              	100.00%
                    	       		Q240P9              	15.20%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for I7MMN2 as seed ortholog is 100%.

Group of orthologs #89. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 T.thermophila:44

O84546              	100.00%		I7M3W6              	100.00%
                    	       		Q232M3              	34.25%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for I7M3W6 as seed ortholog is 84%.

Group of orthologs #90. Best score 122 bits
Score difference with first non-orthologous sequence - C.trachomatis:122 T.thermophila:122

O84771              	100.00%		Q23QL9              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for Q23QL9 as seed ortholog is 100%.

Group of orthologs #91. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 T.thermophila:119

O84711              	100.00%		I7LVY7              	100.00%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for I7LVY7 as seed ortholog is 100%.

Group of orthologs #92. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 T.thermophila:118

O84754              	100.00%		I7M913              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for I7M913 as seed ortholog is 100%.

Group of orthologs #93. Best score 117 bits
Score difference with first non-orthologous sequence - C.trachomatis:117 T.thermophila:117

O84610              	100.00%		Q240Z3              	100.00%
Bootstrap support for O84610 as seed ortholog is 100%.
Bootstrap support for Q240Z3 as seed ortholog is 100%.

Group of orthologs #94. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 T.thermophila:114

O84548              	100.00%		I7M064              	100.00%
                    	       		I7MEJ1              	18.44%
                    	       		Q229Q2              	13.39%
                    	       		Q22Z45              	10.43%
                    	       		I7LTF6              	6.50%
                    	       		I7M2L6              	5.61%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for I7M064 as seed ortholog is 100%.

Group of orthologs #95. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 T.thermophila:114

O84241              	100.00%		Q23A00              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for Q23A00 as seed ortholog is 100%.

Group of orthologs #96. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 T.thermophila:114

O84752              	100.00%		Q23DD3              	100.00%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for Q23DD3 as seed ortholog is 100%.

Group of orthologs #97. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 T.thermophila:10

O84130              	100.00%		I7LWN2              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for I7LWN2 as seed ortholog is 59%.
Alternative seed ortholog is Q23BW1 (10 bits away from this cluster)

Group of orthologs #98. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 T.thermophila:111

O84508              	100.00%		I7MKD9              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for I7MKD9 as seed ortholog is 100%.

Group of orthologs #99. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 T.thermophila:61

O84589              	100.00%		Q23R00              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for Q23R00 as seed ortholog is 92%.

Group of orthologs #100. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 T.thermophila:49

O84781              	100.00%		I7M0N4              	100.00%
                    	       		Q24DT0              	69.30%
                    	       		Q22W89              	65.86%
                    	       		I7MHV6              	65.49%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for I7M0N4 as seed ortholog is 82%.

Group of orthologs #101. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.thermophila:32

O84689              	100.00%		I7M344              	100.00%
                    	       		I7MAN6              	19.10%
                    	       		I7LUY5              	14.61%
                    	       		Q224N3              	12.92%
                    	       		I7MM20              	10.25%
                    	       		Q22RS4              	9.55%
                    	       		Q23CI6              	8.71%
                    	       		Q23VA4              	7.44%
                    	       		I7MG04              	6.88%
                    	       		Q22KP2              	6.46%
                    	       		Q233T5              	6.32%
                    	       		Q23A30              	5.48%
Bootstrap support for O84689 as seed ortholog is 100%.
Bootstrap support for I7M344 as seed ortholog is 88%.

Group of orthologs #102. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.thermophila:104

O84614              	100.00%		Q23JB8              	100.00%
                    	       		Q23JB9              	72.60%
                    	       		Q23JB6              	28.65%
                    	       		Q23U94              	22.60%
                    	       		Q23E11              	15.31%
                    	       		Q23E12              	14.78%
                    	       		Q24FH4              	13.21%
                    	       		I7M1D1              	12.88%
                    	       		Q245I3              	8.87%
                    	       		Q245I4              	8.21%
                    	       		Q23A78              	6.96%
Bootstrap support for O84614 as seed ortholog is 100%.
Bootstrap support for Q23JB8 as seed ortholog is 100%.

Group of orthologs #103. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.thermophila:104

O84492              	100.00%		I7MET3              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for I7MET3 as seed ortholog is 100%.

Group of orthologs #104. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 T.thermophila:103

O84649              	100.00%		I7LVW6              	100.00%
                    	       		I7M423              	13.67%
                    	       		Q24DD8              	12.95%
                    	       		I7M4N6              	10.64%
                    	       		I7LXJ3              	9.53%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for I7LVW6 as seed ortholog is 100%.

Group of orthologs #105. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 T.thermophila:103

O84274              	100.00%		Q22Z09              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for Q22Z09 as seed ortholog is 100%.

Group of orthologs #106. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:18 T.thermophila:99

O84260              	100.00%		Q22NU6              	100.00%
                    	       		Q236T8              	35.10%
Bootstrap support for O84260 as seed ortholog is 56%.
Alternative seed ortholog is O84693 (18 bits away from this cluster)
Bootstrap support for Q22NU6 as seed ortholog is 100%.

Group of orthologs #107. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 T.thermophila:49

O84777              	100.00%		I7LU97              	100.00%
                    	       		Q23QZ4              	67.12%
                    	       		I7MAV7              	33.56%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for I7LU97 as seed ortholog is 94%.

Group of orthologs #108. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 T.thermophila:97

O84530              	100.00%		P0DJ52              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for P0DJ52 as seed ortholog is 100%.

Group of orthologs #109. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 T.thermophila:94

O84650              	100.00%		Q22A31              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for Q22A31 as seed ortholog is 100%.

Group of orthologs #110. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 T.thermophila:91

O84338              	100.00%		Q245Y3              	100.00%
                    	       		Q22N75              	20.09%
                    	       		I7LXR5              	14.33%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for Q245Y3 as seed ortholog is 100%.

Group of orthologs #111. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 T.thermophila:30

O84599              	100.00%		I7MJW1              	100.00%
                    	       		A4VCZ9              	34.03%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for I7MJW1 as seed ortholog is 81%.

Group of orthologs #112. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.thermophila:86

O84665              	100.00%		I7LUL2              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for I7LUL2 as seed ortholog is 100%.

Group of orthologs #113. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.thermophila:86

O84437              	100.00%		I7MJ90              	100.00%
Bootstrap support for O84437 as seed ortholog is 100%.
Bootstrap support for I7MJ90 as seed ortholog is 100%.

Group of orthologs #114. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 T.thermophila:85

O84200              	100.00%		A4VEZ5              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for A4VEZ5 as seed ortholog is 100%.

Group of orthologs #115. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 T.thermophila:83

O84578              	100.00%		I7M3G7              	100.00%
                    	       		I7MK96              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for I7M3G7 as seed ortholog is 100%.
Bootstrap support for I7MK96 as seed ortholog is 100%.

Group of orthologs #116. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 T.thermophila:83

O84806              	100.00%		I7M4F9              	100.00%
                    	       		Q22K97              	12.72%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for I7M4F9 as seed ortholog is 100%.

Group of orthologs #117. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.thermophila:81

O84843              	100.00%		I7MF63              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for I7MF63 as seed ortholog is 100%.

Group of orthologs #118. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.thermophila:81

O84353              	100.00%		I7MHM0              	100.00%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for I7MHM0 as seed ortholog is 100%.

Group of orthologs #119. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 T.thermophila:80

O84415              	100.00%		I7M325              	100.00%
O84710              	9.93%		
Bootstrap support for O84415 as seed ortholog is 100%.
Bootstrap support for I7M325 as seed ortholog is 100%.

Group of orthologs #120. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 T.thermophila:79

O84390              	100.00%		I7MFU9              	100.00%
                    	       		I7MJ19              	37.13%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for I7MFU9 as seed ortholog is 100%.

Group of orthologs #121. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 T.thermophila:77

O84501              	100.00%		I7M791              	100.00%
                    	       		Q23RB4              	12.87%
Bootstrap support for O84501 as seed ortholog is 100%.
Bootstrap support for I7M791 as seed ortholog is 100%.

Group of orthologs #122. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 T.thermophila:75

O84391              	100.00%		Q22EH5              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for Q22EH5 as seed ortholog is 100%.

Group of orthologs #123. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.thermophila:74

O84212              	100.00%		Q24BV5              	100.00%
                    	       		Q23ZD9              	8.75%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for Q24BV5 as seed ortholog is 100%.

Group of orthologs #124. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.thermophila:74

O84851              	100.00%		A4VDC3              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for A4VDC3 as seed ortholog is 100%.

Group of orthologs #125. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 T.thermophila:73

O84457              	100.00%		I7LWQ9              	100.00%
Bootstrap support for O84457 as seed ortholog is 100%.
Bootstrap support for I7LWQ9 as seed ortholog is 100%.

Group of orthologs #126. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 T.thermophila:73

O84595              	100.00%		I7M403              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for I7M403 as seed ortholog is 100%.

Group of orthologs #127. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.thermophila:72

O84555              	100.00%		Q24HS4              	100.00%
                    	       		Q23WM2              	37.44%
                    	       		I7M0I8              	18.20%
                    	       		I7LX10              	18.05%
Bootstrap support for O84555 as seed ortholog is 100%.
Bootstrap support for Q24HS4 as seed ortholog is 100%.

Group of orthologs #128. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.thermophila:72

O84611              	100.00%		Q22LX1              	100.00%
                    	       		Q240T6              	46.80%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for Q22LX1 as seed ortholog is 100%.

Group of orthologs #129. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.thermophila:72

P0CD81              	100.00%		P0DJ53              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for P0DJ53 as seed ortholog is 100%.

Group of orthologs #130. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 T.thermophila:71

O84469              	100.00%		I7MKU1              	100.00%
                    	       		Q22BB0              	16.79%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for I7MKU1 as seed ortholog is 100%.

Group of orthologs #131. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 T.thermophila:71

O84532              	100.00%		I7MGP2              	100.00%
Bootstrap support for O84532 as seed ortholog is 100%.
Bootstrap support for I7MGP2 as seed ortholog is 100%.

Group of orthologs #132. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 T.thermophila:71

P36431              	100.00%		Q234B0              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for Q234B0 as seed ortholog is 100%.

Group of orthologs #133. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 T.thermophila:69

O84684              	100.00%		I7MJ71              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for I7MJ71 as seed ortholog is 100%.

Group of orthologs #134. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 T.thermophila:69

P0A4C8              	100.00%		Q23KG1              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for Q23KG1 as seed ortholog is 100%.

Group of orthologs #135. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 T.thermophila:19

O84680              	100.00%		I7LTG3              	100.00%
                    	       		Q239I9              	100.00%
                    	       		Q24HI1              	9.91%
                    	       		I7M3N0              	9.80%
                    	       		Q23DB7              	9.49%
                    	       		I7LUG1              	9.39%
                    	       		I7M962              	9.29%
                    	       		I7M0A7              	9.18%
                    	       		I7LZM6              	8.88%
                    	       		Q23DQ8              	8.46%
                    	       		I7M4Q4              	8.46%
                    	       		Q24DS9              	8.46%
                    	       		I7MF43              	8.36%
                    	       		I7MGM0              	8.15%
                    	       		I7MKU6              	7.64%
                    	       		I7M1T4              	7.53%
                    	       		Q22UA8              	7.53%
                    	       		Q24D34              	7.53%
                    	       		Q22TH1              	7.50%
                    	       		I7M864              	7.43%
                    	       		I7LZX7              	7.43%
                    	       		Q24HK9              	7.33%
                    	       		I7LWM3              	7.22%
                    	       		I7MHQ1              	7.12%
                    	       		I7MDA1              	7.12%
                    	       		I7MMY1              	7.12%
                    	       		I7LT45              	7.06%
                    	       		I7M0A3              	7.02%
                    	       		I7MAV6              	6.91%
                    	       		Q23KL5              	6.81%
                    	       		A4VDB2              	6.60%
                    	       		Q22N79              	6.50%
                    	       		I7M1D3              	6.40%
                    	       		I7MCP7              	6.40%
                    	       		I7LUV6              	6.40%
                    	       		I7MLZ5              	6.30%
                    	       		I7LZU7              	6.30%
                    	       		Q22BG7              	6.30%
                    	       		I7MJ92              	6.19%
                    	       		Q24DN1              	6.19%
                    	       		I7M3V2              	6.09%
                    	       		I7M6X3              	6.09%
                    	       		Q22VX7              	6.09%
                    	       		Q22X60              	6.09%
                    	       		Q22G17              	5.88%
                    	       		I7ME97              	5.78%
                    	       		Q22LY2              	5.78%
                    	       		I7M0S9              	5.73%
                    	       		I7MM17              	5.73%
                    	       		Q23JM1              	5.68%
                    	       		Q235V8              	5.57%
                    	       		I7LUY8              	5.57%
                    	       		I7M1D6              	5.57%
                    	       		Q23ED8              	5.57%
                    	       		Q235D6              	5.57%
                    	       		Q22W86              	5.47%
                    	       		I7LWJ6              	5.37%
                    	       		I7MF77              	5.26%
                    	       		Q22XN7              	5.26%
                    	       		I7M1K4              	5.16%
                    	       		I7MB86              	5.16%
                    	       		I7MCU4              	5.16%
                    	       		Q23GD5              	5.16%
                    	       		Q24BW4              	5.16%
                    	       		I7MMG7              	5.07%
                    	       		I7LZL5              	5.06%
                    	       		I7LSW3              	5.06%
                    	       		Q24DD1              	5.06%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for I7LTG3 as seed ortholog is 67%.
Alternative seed ortholog is I7M1U5 (19 bits away from this cluster)
Bootstrap support for Q239I9 as seed ortholog is 66%.
Alternative seed ortholog is I7M1U5 (19 bits away from this cluster)

Group of orthologs #136. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 T.thermophila:67

O84842              	100.00%		Q235I3              	100.00%
Bootstrap support for O84842 as seed ortholog is 100%.
Bootstrap support for Q235I3 as seed ortholog is 100%.

Group of orthologs #137. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 T.thermophila:67

O84358              	100.00%		Q24GH8              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for Q24GH8 as seed ortholog is 100%.

Group of orthologs #138. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 T.thermophila:66

O84128              	100.00%		I7MHZ7              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for I7MHZ7 as seed ortholog is 100%.

Group of orthologs #139. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 T.thermophila:64

O84294              	100.00%		A4VD07              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for A4VD07 as seed ortholog is 100%.

Group of orthologs #140. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 T.thermophila:17

O84544              	100.00%		Q240X9              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for Q240X9 as seed ortholog is 78%.

Group of orthologs #141. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 T.thermophila:61

O84284              	100.00%		I7M0D6              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for I7M0D6 as seed ortholog is 100%.

Group of orthologs #142. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 T.thermophila:61

P0C0Z8              	100.00%		Q23AS6              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for Q23AS6 as seed ortholog is 100%.

Group of orthologs #143. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:7 T.thermophila:59

O84691              	100.00%		Q22D55              	100.00%
                    	       		Q22D54              	47.11%
                    	       		Q22MP2              	32.89%
                    	       		Q22MN9              	32.53%
                    	       		Q22MM8              	32.29%
                    	       		Q22NV5              	32.05%
                    	       		Q22MN3              	30.48%
                    	       		Q22MH7              	30.36%
                    	       		Q22MI7              	30.36%
                    	       		Q22MN2              	29.52%
                    	       		Q22MJ3              	28.80%
                    	       		Q22MM7              	28.67%
                    	       		Q22MI4              	28.67%
                    	       		Q22MN0              	28.55%
                    	       		Q22MI0              	28.07%
                    	       		I7LW12              	27.95%
                    	       		Q22MH8              	26.99%
                    	       		Q22MP5              	19.64%
                    	       		Q22MM5              	17.59%
Bootstrap support for O84691 as seed ortholog is 56%.
Alternative seed ortholog is O84205 (7 bits away from this cluster)
Bootstrap support for Q22D55 as seed ortholog is 100%.

Group of orthologs #144. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 T.thermophila:58

P0CE04              	100.00%		I7LVM3              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for I7LVM3 as seed ortholog is 100%.

Group of orthologs #145. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 T.thermophila:58

P36424              	100.00%		Q236M1              	100.00%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for Q236M1 as seed ortholog is 100%.

Group of orthologs #146. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 T.thermophila:57

P0CE06              	100.00%		Q22WU7              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for Q22WU7 as seed ortholog is 100%.

Group of orthologs #147. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 T.thermophila:56

O84395              	100.00%		I7MFG9              	100.00%
                    	       		I7M2D0              	46.79%
                    	       		I7MI18              	22.14%
                    	       		Q22KA1              	17.98%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for I7MFG9 as seed ortholog is 100%.

Group of orthologs #148. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 T.thermophila:56

P0CE03              	100.00%		I7LXQ4              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for I7LXQ4 as seed ortholog is 100%.

Group of orthologs #149. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 T.thermophila:54

O84032              	100.00%		I7LU89              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for I7LU89 as seed ortholog is 100%.

Group of orthologs #150. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 T.thermophila:54

O84687              	100.00%		I7ME40              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for I7ME40 as seed ortholog is 100%.

Group of orthologs #151. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 T.thermophila:54

O84527              	100.00%		Q22AV9              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for Q22AV9 as seed ortholog is 100%.

Group of orthologs #152. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 T.thermophila:53

O84826              	100.00%		Q23U15              	100.00%
                    	       		Q22Y17              	36.93%
                    	       		I7LZJ1              	36.50%
                    	       		Q22Y18              	33.91%
                    	       		Q22LZ0              	28.51%
                    	       		I7MCD8              	18.79%
                    	       		I7MDQ7              	18.57%
                    	       		Q244Z6              	18.57%
                    	       		Q22ZB7              	10.80%
                    	       		Q22LV1              	8.64%
Bootstrap support for O84826 as seed ortholog is 100%.
Bootstrap support for Q23U15 as seed ortholog is 100%.

Group of orthologs #153. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.thermophila:52

O84682              	100.00%		I7M9E4              	100.00%
Bootstrap support for O84682 as seed ortholog is 100%.
Bootstrap support for I7M9E4 as seed ortholog is 100%.

Group of orthologs #154. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.thermophila:52

O84762              	100.00%		I7MDH4              	100.00%
Bootstrap support for O84762 as seed ortholog is 100%.
Bootstrap support for I7MDH4 as seed ortholog is 100%.

Group of orthologs #155. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.thermophila:52

P0CE02              	100.00%		Q22DC6              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for Q22DC6 as seed ortholog is 100%.

Group of orthologs #156. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 T.thermophila:49

O84109              	100.00%		Q22BE5              	100.00%
Bootstrap support for O84109 as seed ortholog is 100%.
Bootstrap support for Q22BE5 as seed ortholog is 100%.

Group of orthologs #157. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 T.thermophila:48

O84147              	100.00%		Q22CV2              	100.00%
                    	       		I7MLL9              	52.53%
                    	       		Q248B0              	42.86%
                    	       		I7M8X9              	41.21%
                    	       		Q22W39              	40.22%
                    	       		Q23G85              	37.58%
                    	       		Q22C77              	36.92%
                    	       		I7LWJ8              	36.26%
                    	       		Q229U9              	35.49%
                    	       		Q22AS9              	31.32%
                    	       		A4VDW8              	27.58%
                    	       		Q235P0              	27.47%
                    	       		I7M2A9              	26.59%
                    	       		Q24FR9              	26.15%
                    	       		I7M6U5              	24.84%
                    	       		Q23FR5              	24.84%
                    	       		Q240Y9              	24.51%
                    	       		Q235N6              	24.18%
                    	       		Q22CZ0              	24.18%
                    	       		Q234C7              	24.07%
                    	       		Q240Y5              	23.52%
                    	       		Q240Z1              	23.19%
                    	       		Q247W3              	22.97%
                    	       		I7MMA8              	21.54%
                    	       		Q23T79              	20.55%
                    	       		Q22S00              	20.22%
                    	       		Q235N7              	18.68%
                    	       		Q22S16              	18.57%
                    	       		I7LTM8              	18.13%
                    	       		Q23FI7              	17.80%
                    	       		Q23GB0              	16.26%
                    	       		I7LUM3              	15.82%
                    	       		I7MAZ3              	15.27%
                    	       		I7LVB7              	14.40%
                    	       		I7M700              	12.97%
                    	       		Q22XQ2              	12.64%
                    	       		I7M704              	12.09%
                    	       		Q23FZ2              	11.54%
                    	       		Q23G44              	10.88%
                    	       		I7M6S3              	10.88%
                    	       		I7MGT0              	10.66%
                    	       		Q24HP6              	10.66%
                    	       		Q24HR9              	10.66%
                    	       		Q22P73              	10.33%
                    	       		I7LTZ6              	10.33%
                    	       		I7MAN0              	10.22%
                    	       		I7MKC1              	10.00%
                    	       		Q22DD1              	9.89%
                    	       		I7MMH2              	9.78%
                    	       		I7LV91              	9.56%
                    	       		Q24BY8              	9.56%
                    	       		Q23G03              	9.45%
                    	       		I7M244              	9.23%
                    	       		Q232Y5              	9.23%
                    	       		Q245J7              	9.23%
                    	       		I7LWD9              	9.12%
                    	       		I7M6N1              	8.90%
                    	       		Q22SN4              	8.79%
                    	       		Q23WW0              	8.68%
                    	       		I7MHC9              	8.46%
                    	       		Q23YB5              	8.35%
                    	       		I7MKK8              	8.13%
                    	       		I7MFC0              	8.02%
                    	       		Q22RI5              	8.02%
                    	       		Q23FS9              	8.02%
                    	       		I7M9Z7              	7.91%
                    	       		Q240P0              	7.80%
                    	       		Q22BC6              	7.69%
                    	       		Q23YD6              	7.69%
                    	       		Q231C9              	7.69%
                    	       		I7LUD0              	7.58%
                    	       		I7MAG1              	7.47%
                    	       		Q22CT4              	7.25%
                    	       		I7M1H9              	7.25%
                    	       		I7MHV8              	7.14%
                    	       		I7M973              	6.92%
                    	       		I7LWJ4              	6.81%
                    	       		I7MAG0              	6.70%
                    	       		I7MM37              	6.70%
                    	       		I7MM78              	6.48%
                    	       		Q240Z4              	6.26%
                    	       		I7MG69              	6.26%
                    	       		Q229Q5              	6.26%
                    	       		Q24FD1              	6.04%
                    	       		Q22GG0              	5.93%
                    	       		I7M9D8              	5.38%
                    	       		I7MDF3              	5.38%
                    	       		I7M053              	5.27%
                    	       		Q240V7              	5.27%
                    	       		A4VDC7              	5.05%
                    	       		A4VE68              	5.05%
                    	       		Q231R0              	5.05%
Bootstrap support for O84147 as seed ortholog is 100%.
Bootstrap support for Q22CV2 as seed ortholog is 100%.

Group of orthologs #158. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.thermophila:47

O84102              	100.00%		I7MGG7              	100.00%
Bootstrap support for O84102 as seed ortholog is 100%.
Bootstrap support for I7MGG7 as seed ortholog is 100%.

Group of orthologs #159. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.thermophila:47

O84499              	100.00%		I7MIT2              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for I7MIT2 as seed ortholog is 100%.

Group of orthologs #160. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.thermophila:47

O84191              	100.00%		Q22U70              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for Q22U70 as seed ortholog is 100%.

Group of orthologs #161. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 T.thermophila:44

O84127              	100.00%		P0DJ15              	100.00%
                    	       		Q245E7              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for P0DJ15 as seed ortholog is 100%.
Bootstrap support for Q245E7 as seed ortholog is 100%.

Group of orthologs #162. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 T.thermophila:43

O84785              	100.00%		Q22WA7              	100.00%
                    	       		I7MLL3              	20.22%
                    	       		I7MGY8              	19.12%
                    	       		Q22WR8              	18.75%
Bootstrap support for O84785 as seed ortholog is 100%.
Bootstrap support for Q22WA7 as seed ortholog is 100%.

Group of orthologs #163. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 T.thermophila:43

O84435              	100.00%		Q22YS4              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for Q22YS4 as seed ortholog is 100%.

Group of orthologs #164. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 T.thermophila:42

O84430              	100.00%		I7M4K8              	100.00%
O84258              	6.21%		Q24C91              	27.49%
Bootstrap support for O84430 as seed ortholog is 100%.
Bootstrap support for I7M4K8 as seed ortholog is 100%.

Group of orthologs #165. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 T.thermophila:42

P66370              	100.00%		Q230V5              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for Q230V5 as seed ortholog is 100%.

Group of orthologs #166. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 T.thermophila:40

O84219              	100.00%		I7M9M9              	100.00%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for I7M9M9 as seed ortholog is 100%.

Group of orthologs #167. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 T.thermophila:40

P0CD88              	100.00%		Q23A84              	100.00%
Bootstrap support for P0CD88 as seed ortholog is 100%.
Bootstrap support for Q23A84 as seed ortholog is 100%.