###################################
149 groups of orthologs
152 in-paralogs from C.trachomatis
163 in-paralogs from T.parva
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 790 bits
Score difference with first non-orthologous sequence - C.trachomatis:790 T.parva:637

O84022              	100.00%		Q4N5I0              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for Q4N5I0 as seed ortholog is 100%.

Group of orthologs #2. Best score 743 bits
Score difference with first non-orthologous sequence - C.trachomatis:743 T.parva:743

O84115              	100.00%		Q4N313              	100.00%
Bootstrap support for O84115 as seed ortholog is 100%.
Bootstrap support for Q4N313 as seed ortholog is 100%.

Group of orthologs #3. Best score 712 bits
Score difference with first non-orthologous sequence - C.trachomatis:712 T.parva:187

P17821              	100.00%		Q4N486              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for Q4N486 as seed ortholog is 99%.

Group of orthologs #4. Best score 626 bits
Score difference with first non-orthologous sequence - C.trachomatis:626 T.parva:159

O84444              	100.00%		Q4N936              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for Q4N936 as seed ortholog is 99%.

Group of orthologs #5. Best score 569 bits
Score difference with first non-orthologous sequence - C.trachomatis:569 T.parva:569

O84288              	100.00%		Q4N1E4              	100.00%
Bootstrap support for O84288 as seed ortholog is 100%.
Bootstrap support for Q4N1E4 as seed ortholog is 100%.

Group of orthologs #6. Best score 558 bits
Score difference with first non-orthologous sequence - C.trachomatis:558 T.parva:558

O84348              	100.00%		Q4N5C9              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for Q4N5C9 as seed ortholog is 100%.

Group of orthologs #7. Best score 495 bits
Score difference with first non-orthologous sequence - C.trachomatis:303 T.parva:91

P0C0Z7              	100.00%		Q4N3C1              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for Q4N3C1 as seed ortholog is 99%.

Group of orthologs #8. Best score 493 bits
Score difference with first non-orthologous sequence - C.trachomatis:493 T.parva:349

O84304              	100.00%		Q4N1J5              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for Q4N1J5 as seed ortholog is 100%.

Group of orthologs #9. Best score 485 bits
Score difference with first non-orthologous sequence - C.trachomatis:485 T.parva:485

O84834              	100.00%		Q4MZI8              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for Q4MZI8 as seed ortholog is 100%.

Group of orthologs #10. Best score 485 bits
Score difference with first non-orthologous sequence - C.trachomatis:485 T.parva:419

O84585              	100.00%		Q4N763              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for Q4N763 as seed ortholog is 100%.

Group of orthologs #11. Best score 482 bits
Score difference with first non-orthologous sequence - C.trachomatis:482 T.parva:347

O84067              	100.00%		Q4N6X5              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for Q4N6X5 as seed ortholog is 100%.

Group of orthologs #12. Best score 455 bits
Score difference with first non-orthologous sequence - C.trachomatis:273 T.parva:455

O84193              	100.00%		Q4N6P5              	100.00%
Bootstrap support for O84193 as seed ortholog is 99%.
Bootstrap support for Q4N6P5 as seed ortholog is 100%.

Group of orthologs #13. Best score 438 bits
Score difference with first non-orthologous sequence - C.trachomatis:438 T.parva:8

P0CD71              	100.00%		Q4MYZ3              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for Q4MYZ3 as seed ortholog is 52%.
Alternative seed ortholog is Q4MYA4 (8 bits away from this cluster)

Group of orthologs #14. Best score 431 bits
Score difference with first non-orthologous sequence - C.trachomatis:431 T.parva:431

O84754              	100.00%		Q4N716              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for Q4N716 as seed ortholog is 100%.

Group of orthologs #15. Best score 426 bits
Score difference with first non-orthologous sequence - C.trachomatis:426 T.parva:426

O84057              	100.00%		Q4MZ92              	100.00%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for Q4MZ92 as seed ortholog is 100%.

Group of orthologs #16. Best score 417 bits
Score difference with first non-orthologous sequence - C.trachomatis:417 T.parva:417

O84060              	100.00%		Q4N4H3              	100.00%
Bootstrap support for O84060 as seed ortholog is 100%.
Bootstrap support for Q4N4H3 as seed ortholog is 100%.

Group of orthologs #17. Best score 397 bits
Score difference with first non-orthologous sequence - C.trachomatis:397 T.parva:322

O84211              	100.00%		Q4MZU4              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for Q4MZU4 as seed ortholog is 100%.

Group of orthologs #18. Best score 393 bits
Score difference with first non-orthologous sequence - C.trachomatis:393 T.parva:221

O84460              	100.00%		Q4N2G0              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for Q4N2G0 as seed ortholog is 99%.

Group of orthologs #19. Best score 372 bits
Score difference with first non-orthologous sequence - C.trachomatis:372 T.parva:372

O84848              	100.00%		Q4N3I7              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for Q4N3I7 as seed ortholog is 100%.

Group of orthologs #20. Best score 371 bits
Score difference with first non-orthologous sequence - C.trachomatis:371 T.parva:371

O84192              	100.00%		Q4N468              	100.00%
Bootstrap support for O84192 as seed ortholog is 100%.
Bootstrap support for Q4N468 as seed ortholog is 100%.

Group of orthologs #21. Best score 370 bits
Score difference with first non-orthologous sequence - C.trachomatis:370 T.parva:370

Q59321              	100.00%		Q4N400              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for Q4N400 as seed ortholog is 100%.

Group of orthologs #22. Best score 367 bits
Score difference with first non-orthologous sequence - C.trachomatis:367 T.parva:367

O84591              	100.00%		Q4N1N2              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for Q4N1N2 as seed ortholog is 100%.

Group of orthologs #23. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:364 T.parva:364

O84310              	100.00%		Q4N1M1              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for Q4N1M1 as seed ortholog is 100%.

Group of orthologs #24. Best score 363 bits
Score difference with first non-orthologous sequence - C.trachomatis:363 T.parva:363

P0CE13              	100.00%		Q4N2G6              	100.00%
                    	       		Q4N3Y0              	15.14%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for Q4N2G6 as seed ortholog is 100%.

Group of orthologs #25. Best score 359 bits
Score difference with first non-orthologous sequence - C.trachomatis:359 T.parva:359

P0CD73              	100.00%		Q4N346              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for Q4N346 as seed ortholog is 100%.

Group of orthologs #26. Best score 331 bits
Score difference with first non-orthologous sequence - C.trachomatis:331 T.parva:331

O84829              	100.00%		Q4N1R9              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for Q4N1R9 as seed ortholog is 100%.

Group of orthologs #27. Best score 299 bits
Score difference with first non-orthologous sequence - C.trachomatis:299 T.parva:299

O84867              	100.00%		Q4MZ17              	100.00%
Bootstrap support for O84867 as seed ortholog is 100%.
Bootstrap support for Q4MZ17 as seed ortholog is 100%.

Group of orthologs #28. Best score 294 bits
Score difference with first non-orthologous sequence - C.trachomatis:294 T.parva:294

O84316              	100.00%		Q4N0F9              	100.00%
                    	       		Q4N1T2              	13.72%
                    	       		Q4N7L1              	8.35%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for Q4N0F9 as seed ortholog is 100%.

Group of orthologs #29. Best score 294 bits
Score difference with first non-orthologous sequence - C.trachomatis:294 T.parva:53

P0CE09              	100.00%		Q4N2K9              	100.00%
                    	       		Q4MYU5              	14.19%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for Q4N2K9 as seed ortholog is 64%.
Alternative seed ortholog is Q4MY95 (53 bits away from this cluster)

Group of orthologs #30. Best score 294 bits
Score difference with first non-orthologous sequence - C.trachomatis:294 T.parva:294

P0CD78              	100.00%		Q4N755              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for Q4N755 as seed ortholog is 100%.

Group of orthologs #31. Best score 291 bits
Score difference with first non-orthologous sequence - C.trachomatis:291 T.parva:76

O84786              	100.00%		Q4MZX2              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for Q4MZX2 as seed ortholog is 94%.

Group of orthologs #32. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 T.parva:181

O84561              	100.00%		Q4N0C2              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for Q4N0C2 as seed ortholog is 99%.

Group of orthologs #33. Best score 273 bits
Score difference with first non-orthologous sequence - C.trachomatis:273 T.parva:34

O84797              	100.00%		Q4N9C9              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for Q4N9C9 as seed ortholog is 62%.
Alternative seed ortholog is Q4N8L5 (34 bits away from this cluster)

Group of orthologs #34. Best score 268 bits
Score difference with first non-orthologous sequence - C.trachomatis:268 T.parva:109

P0CE21              	100.00%		Q4N1X0              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for Q4N1X0 as seed ortholog is 99%.

Group of orthologs #35. Best score 264 bits
Score difference with first non-orthologous sequence - C.trachomatis:120 T.parva:185

O84058              	100.00%		Q4N952              	100.00%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for Q4N952 as seed ortholog is 100%.

Group of orthologs #36. Best score 257 bits
Score difference with first non-orthologous sequence - C.trachomatis:257 T.parva:257

O84335              	100.00%		Q4N8F5              	100.00%
Bootstrap support for O84335 as seed ortholog is 100%.
Bootstrap support for Q4N8F5 as seed ortholog is 100%.

Group of orthologs #37. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:255 T.parva:255

P0CD72              	100.00%		Q4N007              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for Q4N007 as seed ortholog is 100%.

Group of orthologs #38. Best score 252 bits
Score difference with first non-orthologous sequence - C.trachomatis:252 T.parva:252

O84439              	100.00%		Q4N8S4              	100.00%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for Q4N8S4 as seed ortholog is 100%.

Group of orthologs #39. Best score 242 bits
Score difference with first non-orthologous sequence - C.trachomatis:242 T.parva:174

O84309              	100.00%		Q4N2B1              	100.00%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for Q4N2B1 as seed ortholog is 100%.

Group of orthologs #40. Best score 236 bits
Score difference with first non-orthologous sequence - C.trachomatis:236 T.parva:236

O84596              	100.00%		Q4N0B9              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for Q4N0B9 as seed ortholog is 100%.

Group of orthologs #41. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 T.parva:109

O84831              	100.00%		Q4N5N0              	100.00%
                    	       		Q4N5N3              	39.44%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for Q4N5N0 as seed ortholog is 97%.

Group of orthologs #42. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 T.parva:220

O84823              	100.00%		Q4N3Q3              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for Q4N3Q3 as seed ortholog is 100%.

Group of orthologs #43. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 T.parva:77

O84345              	100.00%		Q4N641              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for Q4N641 as seed ortholog is 92%.

Group of orthologs #44. Best score 213 bits
Score difference with first non-orthologous sequence - C.trachomatis:213 T.parva:213

O84787              	100.00%		Q4N0P8              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for Q4N0P8 as seed ortholog is 100%.

Group of orthologs #45. Best score 213 bits
Score difference with first non-orthologous sequence - C.trachomatis:213 T.parva:213

O84828              	100.00%		Q4N7Z3              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for Q4N7Z3 as seed ortholog is 100%.

Group of orthologs #46. Best score 211 bits
Score difference with first non-orthologous sequence - C.trachomatis:211 T.parva:211

O84074              	100.00%		Q4N664              	100.00%
Bootstrap support for O84074 as seed ortholog is 100%.
Bootstrap support for Q4N664 as seed ortholog is 100%.

Group of orthologs #47. Best score 210 bits
Score difference with first non-orthologous sequence - C.trachomatis:210 T.parva:210

O84196              	100.00%		Q4N6U8              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for Q4N6U8 as seed ortholog is 100%.

Group of orthologs #48. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 T.parva:207

O84248              	100.00%		Q4N764              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for Q4N764 as seed ortholog is 100%.

Group of orthologs #49. Best score 206 bits
Score difference with first non-orthologous sequence - C.trachomatis:206 T.parva:206

O84094              	100.00%		Q4MZE2              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for Q4MZE2 as seed ortholog is 100%.

Group of orthologs #50. Best score 205 bits
Score difference with first non-orthologous sequence - C.trachomatis:205 T.parva:205

O84693              	100.00%		Q4N6S6              	100.00%
Bootstrap support for O84693 as seed ortholog is 100%.
Bootstrap support for Q4N6S6 as seed ortholog is 100%.

Group of orthologs #51. Best score 204 bits
Score difference with first non-orthologous sequence - C.trachomatis:133 T.parva:37

O84859              	100.00%		Q4N3C4              	100.00%
Bootstrap support for O84859 as seed ortholog is 99%.
Bootstrap support for Q4N3C4 as seed ortholog is 91%.

Group of orthologs #52. Best score 202 bits
Score difference with first non-orthologous sequence - C.trachomatis:202 T.parva:202

O84698              	100.00%		Q4N4Z0              	100.00%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for Q4N4Z0 as seed ortholog is 100%.

Group of orthologs #53. Best score 196 bits
Score difference with first non-orthologous sequence - C.trachomatis:196 T.parva:196

O84709              	100.00%		Q4MZL4              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for Q4MZL4 as seed ortholog is 100%.

Group of orthologs #54. Best score 195 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 T.parva:195

O84028              	100.00%		Q4N7G8              	100.00%
Bootstrap support for O84028 as seed ortholog is 98%.
Bootstrap support for Q4N7G8 as seed ortholog is 100%.

Group of orthologs #55. Best score 186 bits
Score difference with first non-orthologous sequence - C.trachomatis:186 T.parva:94

O84530              	100.00%		Q4N082              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for Q4N082 as seed ortholog is 99%.

Group of orthologs #56. Best score 186 bits
Score difference with first non-orthologous sequence - C.trachomatis:186 T.parva:21

O84608              	100.00%		Q4N3F1              	100.00%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for Q4N3F1 as seed ortholog is 79%.

Group of orthologs #57. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 T.parva:185

O84613              	100.00%		Q4N5B7              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for Q4N5B7 as seed ortholog is 100%.

Group of orthologs #58. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 T.parva:180

O84630              	100.00%		Q4N5F6              	100.00%
Bootstrap support for O84630 as seed ortholog is 100%.
Bootstrap support for Q4N5F6 as seed ortholog is 100%.

Group of orthologs #59. Best score 179 bits
Score difference with first non-orthologous sequence - C.trachomatis:179 T.parva:22

O84266              	100.00%		Q4N4A2              	100.00%
                    	       		Q4N530              	15.31%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for Q4N4A2 as seed ortholog is 73%.
Alternative seed ortholog is Q4N962 (22 bits away from this cluster)

Group of orthologs #60. Best score 179 bits
Score difference with first non-orthologous sequence - C.trachomatis:179 T.parva:179

O84451              	100.00%		Q4N7U3              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for Q4N7U3 as seed ortholog is 100%.

Group of orthologs #61. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 T.parva:175

O84049              	100.00%		Q4N216              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for Q4N216 as seed ortholog is 100%.

Group of orthologs #62. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 T.parva:86

O84465              	100.00%		Q4N2V0              	100.00%
Bootstrap support for O84465 as seed ortholog is 100%.
Bootstrap support for Q4N2V0 as seed ortholog is 99%.

Group of orthologs #63. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:168 T.parva:168

O84332              	100.00%		Q4N293              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for Q4N293 as seed ortholog is 100%.

Group of orthologs #64. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 T.parva:166

O84289              	100.00%		Q4N5F1              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for Q4N5F1 as seed ortholog is 100%.

Group of orthologs #65. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 T.parva:70

P36431              	100.00%		Q4N697              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for Q4N697 as seed ortholog is 98%.

Group of orthologs #66. Best score 165 bits
Score difference with first non-orthologous sequence - C.trachomatis:165 T.parva:47

O84676              	100.00%		Q4N8S5              	100.00%
O84722              	12.21%		
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for Q4N8S5 as seed ortholog is 90%.

Group of orthologs #67. Best score 163 bits
Score difference with first non-orthologous sequence - C.trachomatis:36 T.parva:17

O84712              	100.00%		Q4N319              	100.00%
Bootstrap support for O84712 as seed ortholog is 93%.
Bootstrap support for Q4N319 as seed ortholog is 80%.

Group of orthologs #68. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 T.parva:160

O84734              	100.00%		Q4N9F3              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for Q4N9F3 as seed ortholog is 100%.

Group of orthologs #69. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 T.parva:94

O84352              	100.00%		Q4N759              	100.00%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for Q4N759 as seed ortholog is 92%.

Group of orthologs #70. Best score 157 bits
Score difference with first non-orthologous sequence - C.trachomatis:157 T.parva:1

O84098              	100.00%		Q4N5W1              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for Q4N5W1 as seed ortholog is 66%.
Alternative seed ortholog is Q4N0F2 (1 bits away from this cluster)

Group of orthologs #71. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 T.parva:74

O84557              	100.00%		Q4N5T7              	100.00%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for Q4N5T7 as seed ortholog is 99%.

Group of orthologs #72. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 T.parva:153

O84066              	100.00%		Q4N9C1              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for Q4N9C1 as seed ortholog is 100%.

Group of orthologs #73. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 T.parva:145

O84727              	100.00%		Q4N1P2              	100.00%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for Q4N1P2 as seed ortholog is 100%.

Group of orthologs #74. Best score 144 bits
Score difference with first non-orthologous sequence - C.trachomatis:144 T.parva:144

O84296              	100.00%		Q4N6L4              	100.00%
                    	       		Q4N3K2              	11.46%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for Q4N6L4 as seed ortholog is 100%.

Group of orthologs #75. Best score 141 bits
Score difference with first non-orthologous sequence - C.trachomatis:141 T.parva:141

O84642              	100.00%		Q4N691              	100.00%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for Q4N691 as seed ortholog is 100%.

Group of orthologs #76. Best score 141 bits
Score difference with first non-orthologous sequence - C.trachomatis:141 T.parva:141

O84260              	100.00%		Q4N9U0              	100.00%
Bootstrap support for O84260 as seed ortholog is 100%.
Bootstrap support for Q4N9U0 as seed ortholog is 100%.

Group of orthologs #77. Best score 131 bits
Score difference with first non-orthologous sequence - C.trachomatis:131 T.parva:35

O84546              	100.00%		Q4MZM8              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for Q4MZM8 as seed ortholog is 81%.

Group of orthologs #78. Best score 130 bits
Score difference with first non-orthologous sequence - C.trachomatis:130 T.parva:130

O84835              	100.00%		Q4N7U5              	100.00%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for Q4N7U5 as seed ortholog is 100%.

Group of orthologs #79. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 T.parva:127

O84704              	100.00%		Q4N3G1              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for Q4N3G1 as seed ortholog is 100%.

Group of orthologs #80. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 T.parva:126

O84732              	100.00%		Q4N4W6              	100.00%
                    	       		Q4N7V0              	13.35%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for Q4N4W6 as seed ortholog is 100%.

Group of orthologs #81. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 T.parva:125

O84006              	100.00%		Q4N155              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for Q4N155 as seed ortholog is 100%.

Group of orthologs #82. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 T.parva:43

O84130              	100.00%		Q4N837              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for Q4N837 as seed ortholog is 90%.

Group of orthologs #83. Best score 122 bits
Score difference with first non-orthologous sequence - C.trachomatis:122 T.parva:122

O84771              	100.00%		Q4N8L9              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for Q4N8L9 as seed ortholog is 100%.

Group of orthologs #84. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 T.parva:118

O84456              	100.00%		Q4MZT9              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for Q4MZT9 as seed ortholog is 100%.

Group of orthologs #85. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 T.parva:107

O84508              	100.00%		Q4N568              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for Q4N568 as seed ortholog is 100%.

Group of orthologs #86. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 T.parva:107

O84065              	100.00%		Q4N7R0              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for Q4N7R0 as seed ortholog is 100%.

Group of orthologs #87. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 T.parva:106

O84547              	100.00%		Q4N555              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for Q4N555 as seed ortholog is 100%.

Group of orthologs #88. Best score 105 bits
Score difference with first non-orthologous sequence - C.trachomatis:105 T.parva:105

O84035              	100.00%		Q4N6F8              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for Q4N6F8 as seed ortholog is 100%.

Group of orthologs #89. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.parva:104

O84274              	100.00%		Q4N9K1              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for Q4N9K1 as seed ortholog is 100%.

Group of orthologs #90. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 T.parva:101

O84033              	100.00%		Q4N4R4              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for Q4N4R4 as seed ortholog is 100%.

Group of orthologs #91. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 T.parva:100

O84391              	100.00%		Q4N196              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for Q4N196 as seed ortholog is 100%.

Group of orthologs #92. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 T.parva:49

P66370              	100.00%		Q4MYA6              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for Q4MYA6 as seed ortholog is 98%.

Group of orthologs #93. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 T.parva:95

O84507              	100.00%		Q4N0M6              	100.00%
Bootstrap support for O84507 as seed ortholog is 100%.
Bootstrap support for Q4N0M6 as seed ortholog is 100%.

Group of orthologs #94. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 T.parva:94

O84200              	100.00%		Q4N2Q3              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for Q4N2Q3 as seed ortholog is 100%.

Group of orthologs #95. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 T.parva:2

O84423              	100.00%		Q4N539              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for Q4N539 as seed ortholog is 52%.
Alternative seed ortholog is Q4N915 (2 bits away from this cluster)

Group of orthologs #96. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 T.parva:7

O84533              	100.00%		Q4MZK2              	100.00%
Bootstrap support for O84533 as seed ortholog is 100%.
Bootstrap support for Q4MZK2 as seed ortholog is 56%.
Alternative seed ortholog is Q4N1K2 (7 bits away from this cluster)

Group of orthologs #97. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 T.parva:87

O84710              	100.00%		Q4MZK9              	100.00%
O84415              	9.75%		
Bootstrap support for O84710 as seed ortholog is 100%.
Bootstrap support for Q4MZK9 as seed ortholog is 100%.

Group of orthologs #98. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 T.parva:87

O84358              	100.00%		Q4N282              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for Q4N282 as seed ortholog is 100%.

Group of orthologs #99. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 T.parva:16

O84589              	100.00%		Q4N3J7              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for Q4N3J7 as seed ortholog is 59%.
Alternative seed ortholog is Q4N8F3 (16 bits away from this cluster)

Group of orthologs #100. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.parva:86

O84108              	100.00%		Q4N711              	100.00%
O84665              	5.32%		
Bootstrap support for O84108 as seed ortholog is 100%.
Bootstrap support for Q4N711 as seed ortholog is 100%.

Group of orthologs #101. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.parva:86

O84864              	100.00%		Q4N4T6              	100.00%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for Q4N4T6 as seed ortholog is 100%.

Group of orthologs #102. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 T.parva:85

O84468              	100.00%		Q4N0Q6              	100.00%
Bootstrap support for O84468 as seed ortholog is 100%.
Bootstrap support for Q4N0Q6 as seed ortholog is 100%.

Group of orthologs #103. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 T.parva:84

O84338              	100.00%		Q4MZT0              	100.00%
                    	       		Q4N2G9              	21.44%
                    	       		Q4N742              	17.66%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for Q4MZT0 as seed ortholog is 100%.

Group of orthologs #104. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 T.parva:84

O84215              	100.00%		Q4MZ63              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for Q4MZ63 as seed ortholog is 100%.

Group of orthologs #105. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 T.parva:84

O84595              	100.00%		Q4N9A4              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for Q4N9A4 as seed ortholog is 100%.

Group of orthologs #106. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 T.parva:82

O84247              	100.00%		Q4N1L6              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for Q4N1L6 as seed ortholog is 100%.

Group of orthologs #107. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.parva:81

O84221              	100.00%		Q4MYN9              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for Q4MYN9 as seed ortholog is 100%.

Group of orthologs #108. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.parva:81

O84435              	100.00%		Q4N1E0              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for Q4N1E0 as seed ortholog is 100%.

Group of orthologs #109. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.parva:81

O84843              	100.00%		Q4N1V5              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for Q4N1V5 as seed ortholog is 100%.

Group of orthologs #110. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.parva:81

O84720              	100.00%		Q4N8I2              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for Q4N8I2 as seed ortholog is 100%.

Group of orthologs #111. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 T.parva:39

P0CD83              	100.00%		Q4MYB7              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for Q4MYB7 as seed ortholog is 97%.

Group of orthologs #112. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 T.parva:80

O84686              	100.00%		Q4N2U3              	100.00%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for Q4N2U3 as seed ortholog is 100%.

Group of orthologs #113. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 T.parva:77

O84719              	100.00%		Q4N912              	100.00%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for Q4N912 as seed ortholog is 100%.

Group of orthologs #114. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 T.parva:75

O84494              	100.00%		Q4N8X1              	100.00%
Bootstrap support for O84494 as seed ortholog is 100%.
Bootstrap support for Q4N8X1 as seed ortholog is 100%.

Group of orthologs #115. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.parva:74

O84649              	100.00%		Q4MYZ9              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for Q4MYZ9 as seed ortholog is 100%.

Group of orthologs #116. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.parva:5

O84544              	100.00%		Q4N2X5              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for Q4N2X5 as seed ortholog is 62%.
Alternative seed ortholog is Q4N6A2 (5 bits away from this cluster)

Group of orthologs #117. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.parva:74

O84096              	100.00%		Q4N5B0              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for Q4N5B0 as seed ortholog is 100%.

Group of orthologs #118. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.parva:34

O84320              	100.00%		Q4N6Q1              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for Q4N6Q1 as seed ortholog is 85%.

Group of orthologs #119. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.parva:32

O84127              	100.00%		Q4N8U5              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for Q4N8U5 as seed ortholog is 91%.

Group of orthologs #120. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.parva:72

P0CE03              	100.00%		Q4N2R9              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for Q4N2R9 as seed ortholog is 100%.

Group of orthologs #121. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.parva:72

O84321              	100.00%		Q4N7N2              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for Q4N7N2 as seed ortholog is 100%.

Group of orthologs #122. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 T.parva:71

O84258              	100.00%		Q4N4T4              	100.00%
Bootstrap support for O84258 as seed ortholog is 100%.
Bootstrap support for Q4N4T4 as seed ortholog is 100%.

Group of orthologs #123. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 T.parva:71

O84650              	100.00%		Q4N945              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for Q4N945 as seed ortholog is 100%.

Group of orthologs #124. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 T.parva:68

O84599              	100.00%		Q4N4F4              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for Q4N4F4 as seed ortholog is 100%.

Group of orthologs #125. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 T.parva:68

P36424              	100.00%		Q4N773              	100.00%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for Q4N773 as seed ortholog is 100%.

Group of orthologs #126. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 T.parva:9

P0CD81              	100.00%		Q4N5G7              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for Q4N5G7 as seed ortholog is 63%.
Alternative seed ortholog is Q4N2F7 (9 bits away from this cluster)

Group of orthologs #127. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 T.parva:65

O84548              	100.00%		Q4N8R1              	100.00%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for Q4N8R1 as seed ortholog is 100%.

Group of orthologs #128. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 T.parva:64

O84851              	100.00%		Q4MYP8              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for Q4MYP8 as seed ortholog is 100%.

Group of orthologs #129. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 T.parva:62

O84390              	100.00%		Q4N9V7              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for Q4N9V7 as seed ortholog is 100%.

Group of orthologs #130. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 T.parva:62

P0C0Z8              	100.00%		Q4N9C4              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for Q4N9C4 as seed ortholog is 100%.

Group of orthologs #131. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 T.parva:61

P0A4C8              	100.00%		Q4N459              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for Q4N459 as seed ortholog is 100%.

Group of orthologs #132. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 T.parva:60

P38004              	100.00%		Q4N1X1              	100.00%
                    	       		Q4N1X2              	39.70%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for Q4N1X1 as seed ortholog is 100%.

Group of orthologs #133. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 T.parva:59

O84527              	100.00%		Q4N2D0              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for Q4N2D0 as seed ortholog is 100%.

Group of orthologs #134. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 T.parva:58

O84128              	100.00%		Q4N9B4              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for Q4N9B4 as seed ortholog is 100%.

Group of orthologs #135. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 T.parva:57

O84687              	100.00%		Q4N1J1              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for Q4N1J1 as seed ortholog is 100%.

Group of orthologs #136. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 T.parva:57

O84842              	100.00%		Q4N598              	100.00%
Bootstrap support for O84842 as seed ortholog is 100%.
Bootstrap support for Q4N598 as seed ortholog is 100%.

Group of orthologs #137. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 T.parva:57

O84442              	100.00%		Q4N6J0              	100.00%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for Q4N6J0 as seed ortholog is 100%.

Group of orthologs #138. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 T.parva:55

O84499              	100.00%		Q4N7K9              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for Q4N7K9 as seed ortholog is 100%.

Group of orthologs #139. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 T.parva:55

P0CE04              	100.00%		Q4N8W3              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for Q4N8W3 as seed ortholog is 100%.

Group of orthologs #140. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.parva:52

P0CE06              	100.00%		Q4MYI0              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for Q4MYI0 as seed ortholog is 100%.

Group of orthologs #141. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.parva:52

O84441              	100.00%		Q4MZY9              	100.00%
Bootstrap support for O84441 as seed ortholog is 100%.
Bootstrap support for Q4MZY9 as seed ortholog is 100%.

Group of orthologs #142. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.parva:52

O84294              	100.00%		Q4N8T3              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for Q4N8T3 as seed ortholog is 100%.

Group of orthologs #143. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 T.parva:51

O84191              	100.00%		Q4N5H1              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for Q4N5H1 as seed ortholog is 100%.

Group of orthologs #144. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 T.parva:50

O84496              	100.00%		Q4N4K1              	100.00%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for Q4N4K1 as seed ortholog is 100%.

Group of orthologs #145. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 T.parva:49

O84680              	100.00%		Q4N4E3              	100.00%
                    	       		Q4N737              	14.40%
                    	       		Q4N6U7              	14.14%
                    	       		Q4N591              	13.61%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for Q4N4E3 as seed ortholog is 100%.

Group of orthologs #146. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 T.parva:49

P0CD84              	100.00%		Q4N0U5              	100.00%
Bootstrap support for P0CD84 as seed ortholog is 100%.
Bootstrap support for Q4N0U5 as seed ortholog is 100%.

Group of orthologs #147. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 T.parva:49

P0CE02              	100.00%		Q4N325              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for Q4N325 as seed ortholog is 100%.

Group of orthologs #148. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 T.parva:49

O84032              	100.00%		Q4N9S3              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for Q4N9S3 as seed ortholog is 100%.

Group of orthologs #149. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 T.parva:42

O84469              	100.00%		Q4N6R8              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for Q4N6R8 as seed ortholog is 100%.