###################################
136 groups of orthologs
139 in-paralogs from C.trachomatis
188 in-paralogs from T.brucei
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 892 bits
Score difference with first non-orthologous sequence - C.trachomatis:765 T.brucei:835

O84022              	100.00%		Q38A55              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for Q38A55 as seed ortholog is 100%.

Group of orthologs #2. Best score 723 bits
Score difference with first non-orthologous sequence - C.trachomatis:155 T.brucei:53

O84115              	100.00%		Q586B8              	100.00%
Bootstrap support for O84115 as seed ortholog is 99%.
Bootstrap support for Q586B8 as seed ortholog is 87%.

Group of orthologs #3. Best score 654 bits
Score difference with first non-orthologous sequence - C.trachomatis:599 T.brucei:130

P17821              	100.00%		Q585X3              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for Q585X3 as seed ortholog is 99%.

Group of orthologs #4. Best score 540 bits
Score difference with first non-orthologous sequence - C.trachomatis:355 T.brucei:195

P0C0Z7              	100.00%		Q38AV5              	100.00%
                    	       		Q381T1              	12.90%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for Q38AV5 as seed ortholog is 100%.

Group of orthologs #5. Best score 524 bits
Score difference with first non-orthologous sequence - C.trachomatis:408 T.brucei:431

O84304              	100.00%		Q587B4              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for Q587B4 as seed ortholog is 100%.

Group of orthologs #6. Best score 497 bits
Score difference with first non-orthologous sequence - C.trachomatis:497 T.brucei:497

O84057              	100.00%		Q383T1              	100.00%
                    	       		Q387A7              	8.43%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for Q383T1 as seed ortholog is 100%.

Group of orthologs #7. Best score 486 bits
Score difference with first non-orthologous sequence - C.trachomatis:486 T.brucei:486

O84755              	100.00%		Q57YL8              	100.00%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for Q57YL8 as seed ortholog is 100%.

Group of orthologs #8. Best score 451 bits
Score difference with first non-orthologous sequence - C.trachomatis:451 T.brucei:451

O84834              	100.00%		Q384N4              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for Q384N4 as seed ortholog is 100%.

Group of orthologs #9. Best score 443 bits
Score difference with first non-orthologous sequence - C.trachomatis:443 T.brucei:95

O84444              	100.00%		Q38BA0              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for Q38BA0 as seed ortholog is 96%.

Group of orthologs #10. Best score 442 bits
Score difference with first non-orthologous sequence - C.trachomatis:442 T.brucei:442

O84754              	100.00%		Q583T3              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for Q583T3 as seed ortholog is 100%.

Group of orthologs #11. Best score 408 bits
Score difference with first non-orthologous sequence - C.trachomatis:408 T.brucei:408

O84392              	100.00%		Q38CZ3              	100.00%
Bootstrap support for O84392 as seed ortholog is 100%.
Bootstrap support for Q38CZ3 as seed ortholog is 100%.

Group of orthologs #12. Best score 406 bits
Score difference with first non-orthologous sequence - C.trachomatis:406 T.brucei:406

O84460              	100.00%		Q386W0              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for Q386W0 as seed ortholog is 100%.

Group of orthologs #13. Best score 403 bits
Score difference with first non-orthologous sequence - C.trachomatis:327 T.brucei:403

O84585              	100.00%		Q57W54              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for Q57W54 as seed ortholog is 100%.

Group of orthologs #14. Best score 399 bits
Score difference with first non-orthologous sequence - C.trachomatis:399 T.brucei:399

Q59321              	100.00%		Q4GZ95              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for Q4GZ95 as seed ortholog is 100%.

Group of orthologs #15. Best score 397 bits
Score difference with first non-orthologous sequence - C.trachomatis:397 T.brucei:83

P0CE13              	100.00%		Q38AR9              	100.00%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for Q38AR9 as seed ortholog is 99%.

Group of orthologs #16. Best score 381 bits
Score difference with first non-orthologous sequence - C.trachomatis:381 T.brucei:225

P0CD71              	100.00%		Q388R1              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for Q388R1 as seed ortholog is 100%.

Group of orthologs #17. Best score 374 bits
Score difference with first non-orthologous sequence - C.trachomatis:374 T.brucei:374

O84310              	100.00%		Q580D6              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for Q580D6 as seed ortholog is 100%.

Group of orthologs #18. Best score 363 bits
Score difference with first non-orthologous sequence - C.trachomatis:363 T.brucei:363

O84126              	100.00%		Q57YQ4              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for Q57YQ4 as seed ortholog is 100%.

Group of orthologs #19. Best score 356 bits
Score difference with first non-orthologous sequence - C.trachomatis:356 T.brucei:356

O84591              	100.00%		Q38BV6              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for Q38BV6 as seed ortholog is 100%.

Group of orthologs #20. Best score 334 bits
Score difference with first non-orthologous sequence - C.trachomatis:334 T.brucei:210

O84067              	100.00%		Q38BU9              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for Q38BU9 as seed ortholog is 99%.

Group of orthologs #21. Best score 327 bits
Score difference with first non-orthologous sequence - C.trachomatis:327 T.brucei:327

O84823              	100.00%		Q582H1              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for Q582H1 as seed ortholog is 100%.

Group of orthologs #22. Best score 322 bits
Score difference with first non-orthologous sequence - C.trachomatis:322 T.brucei:10

O84848              	100.00%		Q584A7              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for Q584A7 as seed ortholog is 60%.
Alternative seed ortholog is Q388P7 (10 bits away from this cluster)

Group of orthologs #23. Best score 315 bits
Score difference with first non-orthologous sequence - C.trachomatis:315 T.brucei:103

O84248              	100.00%		Q57ZD2              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for Q57ZD2 as seed ortholog is 99%.

Group of orthologs #24. Best score 314 bits
Score difference with first non-orthologous sequence - C.trachomatis:314 T.brucei:203

P0CD78              	100.00%		Q4GZE6              	100.00%
                    	       		Q4GZG3              	51.66%
                    	       		Q4GZG4              	51.52%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for Q4GZE6 as seed ortholog is 99%.

Group of orthologs #25. Best score 314 bits
Score difference with first non-orthologous sequence - C.trachomatis:314 T.brucei:314

O84829              	100.00%		Q582T6              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for Q582T6 as seed ortholog is 100%.

Group of orthologs #26. Best score 300 bits
Score difference with first non-orthologous sequence - C.trachomatis:246 T.brucei:111

O84561              	100.00%		Q381B3              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for Q381B3 as seed ortholog is 97%.

Group of orthologs #27. Best score 293 bits
Score difference with first non-orthologous sequence - C.trachomatis:293 T.brucei:293

O84066              	100.00%		Q38DI7              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for Q38DI7 as seed ortholog is 100%.

Group of orthologs #28. Best score 291 bits
Score difference with first non-orthologous sequence - C.trachomatis:291 T.brucei:291

O84786              	100.00%		Q580G3              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for Q580G3 as seed ortholog is 100%.

Group of orthologs #29. Best score 281 bits
Score difference with first non-orthologous sequence - C.trachomatis:281 T.brucei:281

O84188              	100.00%		Q38BZ6              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for Q38BZ6 as seed ortholog is 100%.

Group of orthologs #30. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 T.brucei:42

O84094              	100.00%		Q586U4              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for Q586U4 as seed ortholog is 85%.

Group of orthologs #31. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 T.brucei:277

P0CD72              	100.00%		Q4GYJ4              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for Q4GYJ4 as seed ortholog is 100%.

Group of orthologs #32. Best score 260 bits
Score difference with first non-orthologous sequence - C.trachomatis:260 T.brucei:139

O84098              	100.00%		Q57WE3              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for Q57WE3 as seed ortholog is 99%.

Group of orthologs #33. Best score 253 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 T.brucei:253

O84315              	100.00%		Q57X22              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for Q57X22 as seed ortholog is 100%.

Group of orthologs #34. Best score 252 bits
Score difference with first non-orthologous sequence - C.trachomatis:252 T.brucei:191

O84352              	100.00%		Q38BS9              	100.00%
                    	       		Q387W0              	14.59%
                    	       		Q389P2              	8.43%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for Q38BS9 as seed ortholog is 99%.

Group of orthologs #35. Best score 251 bits
Score difference with first non-orthologous sequence - C.trachomatis:251 T.brucei:11

O84797              	100.00%		Q38AW5              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for Q38AW5 as seed ortholog is 57%.
Alternative seed ortholog is Q38F29 (11 bits away from this cluster)

Group of orthologs #36. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 T.brucei:129

O84058              	100.00%		Q383B2              	100.00%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for Q383B2 as seed ortholog is 99%.

Group of orthologs #37. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:250 T.brucei:250

O84831              	100.00%		Q581Z6              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for Q581Z6 as seed ortholog is 100%.

Group of orthologs #38. Best score 249 bits
Score difference with first non-orthologous sequence - C.trachomatis:249 T.brucei:249

O84828              	100.00%		Q38AM2              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for Q38AM2 as seed ortholog is 100%.

Group of orthologs #39. Best score 244 bits
Score difference with first non-orthologous sequence - C.trachomatis:244 T.brucei:244

P0CE09              	100.00%		Q583H5              	100.00%
                    	       		Q4GZE8              	16.55%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for Q583H5 as seed ortholog is 100%.

Group of orthologs #40. Best score 244 bits
Score difference with first non-orthologous sequence - C.trachomatis:244 T.brucei:244

O84309              	100.00%		Q383B1              	100.00%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for Q383B1 as seed ortholog is 100%.

Group of orthologs #41. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 T.brucei:240

O84698              	100.00%		Q4GZF9              	100.00%
                    	       		Q4GZF1              	94.65%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for Q4GZF9 as seed ortholog is 100%.

Group of orthologs #42. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:237 T.brucei:237

O84316              	100.00%		Q38BW7              	100.00%
                    	       		Q57YU2              	13.54%
                    	       		Q584K3              	13.54%
                    	       		Q57UI1              	6.65%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for Q38BW7 as seed ortholog is 100%.

Group of orthologs #43. Best score 232 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 T.brucei:102

O84249              	100.00%		Q38AK7              	100.00%
Bootstrap support for O84249 as seed ortholog is 98%.
Bootstrap support for Q38AK7 as seed ortholog is 98%.

Group of orthologs #44. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 T.brucei:228

O84562              	100.00%		Q388A7              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for Q388A7 as seed ortholog is 100%.

Group of orthologs #45. Best score 224 bits
Score difference with first non-orthologous sequence - C.trachomatis:224 T.brucei:224

O84642              	100.00%		Q385Q9              	100.00%
                    	       		Q38BN3              	10.18%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for Q385Q9 as seed ortholog is 100%.

Group of orthologs #46. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 T.brucei:156

O84381              	100.00%		Q383F3              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for Q383F3 as seed ortholog is 100%.

Group of orthologs #47. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 T.brucei:141

O84596              	100.00%		Q57TV5              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for Q57TV5 as seed ortholog is 99%.

Group of orthologs #48. Best score 216 bits
Score difference with first non-orthologous sequence - C.trachomatis:216 T.brucei:216

O84775              	100.00%		Q586W9              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for Q586W9 as seed ortholog is 100%.

Group of orthologs #49. Best score 208 bits
Score difference with first non-orthologous sequence - C.trachomatis:208 T.brucei:84

O84732              	100.00%		Q387C6              	100.00%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for Q387C6 as seed ortholog is 95%.

Group of orthologs #50. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 T.brucei:207

O84423              	100.00%		Q38AM0              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for Q38AM0 as seed ortholog is 100%.

Group of orthologs #51. Best score 205 bits
Score difference with first non-orthologous sequence - C.trachomatis:205 T.brucei:205

O84859              	100.00%		Q4FKC0              	100.00%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for Q4FKC0 as seed ortholog is 100%.

Group of orthologs #52. Best score 194 bits
Score difference with first non-orthologous sequence - C.trachomatis:194 T.brucei:15

O84345              	100.00%		Q38DE1              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for Q38DE1 as seed ortholog is 47%.
Alternative seed ortholog is Q38EC6 (15 bits away from this cluster)

Group of orthologs #53. Best score 190 bits
Score difference with first non-orthologous sequence - C.trachomatis:190 T.brucei:190

O84332              	100.00%		Q385L6              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for Q385L6 as seed ortholog is 100%.

Group of orthologs #54. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 T.brucei:188

P0CE21              	100.00%		Q388I8              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for Q388I8 as seed ortholog is 100%.

Group of orthologs #55. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 T.brucei:188

O84081              	100.00%		Q57WP0              	100.00%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for Q57WP0 as seed ortholog is 100%.

Group of orthologs #56. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 T.brucei:185

O84734              	100.00%		Q384V4              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for Q384V4 as seed ortholog is 100%.

Group of orthologs #57. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 T.brucei:183

O84028              	100.00%		Q385M8              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for Q385M8 as seed ortholog is 100%.

Group of orthologs #58. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 T.brucei:14

O84266              	100.00%		Q387J7              	100.00%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for Q387J7 as seed ortholog is 59%.
Alternative seed ortholog is Q380Z4 (14 bits away from this cluster)

Group of orthologs #59. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 T.brucei:175

O84608              	100.00%		D6XKT6              	100.00%
                    	       		Q38EX8              	14.95%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for D6XKT6 as seed ortholog is 100%.

Group of orthologs #60. Best score 174 bits
Score difference with first non-orthologous sequence - C.trachomatis:174 T.brucei:174

O84613              	100.00%		Q388K2              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for Q388K2 as seed ortholog is 100%.

Group of orthologs #61. Best score 165 bits
Score difference with first non-orthologous sequence - C.trachomatis:165 T.brucei:105

O84402              	100.00%		Q384R7              	100.00%
                    	       		Q384J0              	5.00%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for Q384R7 as seed ortholog is 98%.

Group of orthologs #62. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 T.brucei:160

O84109              	100.00%		Q383D4              	100.00%
Bootstrap support for O84109 as seed ortholog is 100%.
Bootstrap support for Q383D4 as seed ortholog is 100%.

Group of orthologs #63. Best score 156 bits
Score difference with first non-orthologous sequence - C.trachomatis:156 T.brucei:156

O84711              	100.00%		Q382V8              	100.00%
                    	       		Q57VB1              	28.70%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for Q382V8 as seed ortholog is 100%.

Group of orthologs #64. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 T.brucei:27

O84676              	100.00%		Q57XX1              	100.00%
O84722              	13.59%		
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for Q57XX1 as seed ortholog is 77%.

Group of orthologs #65. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 T.brucei:154

O84196              	100.00%		Q583M1              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for Q583M1 as seed ortholog is 100%.

Group of orthologs #66. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 T.brucei:153

O84035              	100.00%		Q38C91              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for Q38C91 as seed ortholog is 100%.

Group of orthologs #67. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 T.brucei:151

O84719              	100.00%		Q57YW0              	100.00%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for Q57YW0 as seed ortholog is 100%.

Group of orthologs #68. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 T.brucei:145

O84049              	100.00%		Q385B0              	100.00%
                    	       		Q386R3              	31.59%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for Q385B0 as seed ortholog is 100%.

Group of orthologs #69. Best score 144 bits
Score difference with first non-orthologous sequence - C.trachomatis:144 T.brucei:38

O84247              	100.00%		Q388X3              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for Q388X3 as seed ortholog is 84%.

Group of orthologs #70. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 T.brucei:143

O84026              	100.00%		Q57WY8              	100.00%
O84465              	5.87%		
Bootstrap support for O84026 as seed ortholog is 100%.
Bootstrap support for Q57WY8 as seed ortholog is 100%.

Group of orthologs #71. Best score 138 bits
Score difference with first non-orthologous sequence - C.trachomatis:138 T.brucei:42

O84546              	100.00%		Q585M3              	100.00%
                    	       		Q38CB4              	24.87%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for Q585M3 as seed ortholog is 84%.

Group of orthologs #72. Best score 138 bits
Score difference with first non-orthologous sequence - C.trachomatis:138 T.brucei:138

O84614              	100.00%		Q382S1              	100.00%
Bootstrap support for O84614 as seed ortholog is 100%.
Bootstrap support for Q382S1 as seed ortholog is 100%.

Group of orthologs #73. Best score 138 bits
Score difference with first non-orthologous sequence - C.trachomatis:138 T.brucei:138

O84123              	100.00%		Q389C2              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for Q389C2 as seed ortholog is 100%.

Group of orthologs #74. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:28 T.brucei:134

O84260              	100.00%		Q386Y7              	100.00%
                    	       		Q38DC4              	7.86%
Bootstrap support for O84260 as seed ortholog is 51%.
Alternative seed ortholog is O84693 (28 bits away from this cluster)
Bootstrap support for Q386Y7 as seed ortholog is 100%.

Group of orthologs #75. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 T.brucei:134

O84812              	100.00%		Q57YQ9              	100.00%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for Q57YQ9 as seed ortholog is 100%.

Group of orthologs #76. Best score 133 bits
Score difference with first non-orthologous sequence - C.trachomatis:133 T.brucei:133

O84296              	100.00%		Q381T3              	100.00%
                    	       		Q381J5              	81.67%
                    	       		Q57Z58              	7.72%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for Q381T3 as seed ortholog is 100%.

Group of orthologs #77. Best score 133 bits
Score difference with first non-orthologous sequence - C.trachomatis:133 T.brucei:20

O84649              	100.00%		Q38C52              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for Q38C52 as seed ortholog is 68%.
Alternative seed ortholog is Q383X7 (20 bits away from this cluster)

Group of orthologs #78. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 T.brucei:129

O84720              	100.00%		Q386Q8              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for Q386Q8 as seed ortholog is 100%.

Group of orthologs #79. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 T.brucei:128

O84864              	100.00%		Q57VD7              	100.00%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for Q57VD7 as seed ortholog is 100%.

Group of orthologs #80. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 T.brucei:22

P38004              	100.00%		Q389E9              	100.00%
Bootstrap support for P38004 as seed ortholog is 98%.
Bootstrap support for Q389E9 as seed ortholog is 87%.

Group of orthologs #81. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 T.brucei:123

O84835              	100.00%		Q382Q0              	100.00%
                    	       		Q382Q2              	100.00%
                    	       		Q382Q1              	99.65%
                    	       		Q382Q3              	99.12%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for Q382Q0 as seed ortholog is 100%.
Bootstrap support for Q382Q2 as seed ortholog is 100%.

Group of orthologs #82. Best score 122 bits
Score difference with first non-orthologous sequence - C.trachomatis:122 T.brucei:10

O84130              	100.00%		Q38BZ2              	100.00%
                    	       		Q38BZ1              	10.67%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for Q38BZ2 as seed ortholog is 60%.
Alternative seed ortholog is Q38CF7 (10 bits away from this cluster)

Group of orthologs #83. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 T.brucei:119

O84289              	100.00%		Q581Z9              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for Q581Z9 as seed ortholog is 100%.

Group of orthologs #84. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 T.brucei:118

O84650              	100.00%		Q582L4              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for Q582L4 as seed ortholog is 100%.

Group of orthologs #85. Best score 113 bits
Score difference with first non-orthologous sequence - C.trachomatis:113 T.brucei:113

O84456              	100.00%		Q582K3              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for Q582K3 as seed ortholog is 100%.

Group of orthologs #86. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 T.brucei:112

O84032              	100.00%		Q38BC8              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for Q38BC8 as seed ortholog is 100%.

Group of orthologs #87. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 T.brucei:112

O84709              	100.00%		Q57TZ4              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for Q57TZ4 as seed ortholog is 100%.

Group of orthologs #88. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 T.brucei:109

O84547              	100.00%		Q584V0              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for Q584V0 as seed ortholog is 100%.

Group of orthologs #89. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 T.brucei:107

O84508              	100.00%		Q381H3              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for Q381H3 as seed ortholog is 100%.

Group of orthologs #90. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.brucei:104

P55137              	100.00%		Q4GYR8              	100.00%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for Q4GYR8 as seed ortholog is 100%.

Group of orthologs #91. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 T.brucei:102

O84843              	100.00%		Q382C5              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for Q382C5 as seed ortholog is 100%.

Group of orthologs #92. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 T.brucei:100

O84391              	100.00%		Q382P1              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for Q382P1 as seed ortholog is 100%.

Group of orthologs #93. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 T.brucei:98

O84442              	100.00%		Q384I1              	100.00%
                    	       		Q384R3              	100.00%
                    	       		Q38D97              	17.35%
                    	       		Q583J8              	7.91%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for Q384I1 as seed ortholog is 100%.
Bootstrap support for Q384R3 as seed ortholog is 100%.

Group of orthologs #94. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 T.brucei:98

O84200              	100.00%		Q582L2              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for Q582L2 as seed ortholog is 100%.

Group of orthologs #95. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 T.brucei:18

O84358              	100.00%		Q585P9              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for Q585P9 as seed ortholog is 82%.

Group of orthologs #96. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 T.brucei:32

O84530              	100.00%		Q57W56              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for Q57W56 as seed ortholog is 95%.

Group of orthologs #97. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.brucei:29

O84680              	100.00%		Q584T1              	100.00%
                    	       		Q38DR5              	19.14%
                    	       		Q38DS1              	18.44%
                    	       		Q388U5              	16.92%
                    	       		Q582J2              	13.89%
                    	       		Q582V7              	12.95%
                    	       		Q38BA7              	9.22%
                    	       		Q57YE4              	8.52%
                    	       		Q388P9              	8.28%
                    	       		Q38F57              	6.77%
                    	       		Q388Q0              	6.18%
                    	       		Q583H1              	6.18%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for Q584T1 as seed ortholog is 81%.

Group of orthologs #98. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 T.brucei:85

O84782              	100.00%		Q57YK7              	100.00%
                    	       		Q38BJ5              	15.16%
                    	       		Q580D0              	8.78%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for Q57YK7 as seed ortholog is 100%.

Group of orthologs #99. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 T.brucei:83

O84435              	100.00%		Q383M8              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for Q383M8 as seed ortholog is 100%.

Group of orthologs #100. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.brucei:81

O84139              	100.00%		Q384E0              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for Q384E0 as seed ortholog is 100%.

Group of orthologs #101. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 T.brucei:81

O84557              	100.00%		Q583H8              	100.00%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for Q583H8 as seed ortholog is 100%.

Group of orthologs #102. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 T.brucei:80

O84578              	100.00%		Q38D78              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for Q38D78 as seed ortholog is 100%.

Group of orthologs #103. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 T.brucei:78

O84338              	100.00%		Q585Y7              	100.00%
                    	       		Q38DH5              	20.96%
                    	       		Q383X4              	16.01%
                    	       		Q38AG5              	5.61%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for Q585Y7 as seed ortholog is 100%.

Group of orthologs #104. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 T.brucei:77

O84033              	100.00%		Q389H1              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for Q389H1 as seed ortholog is 100%.

Group of orthologs #105. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 T.brucei:76

O84826              	100.00%		Q385I6              	100.00%
Bootstrap support for O84826 as seed ortholog is 100%.
Bootstrap support for Q385I6 as seed ortholog is 100%.

Group of orthologs #106. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.brucei:74

O84851              	100.00%		Q57W17              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for Q57W17 as seed ortholog is 100%.

Group of orthologs #107. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 T.brucei:73

P26623              	100.00%		Q387V4              	100.00%
Bootstrap support for P26623 as seed ortholog is 100%.
Bootstrap support for Q387V4 as seed ortholog is 100%.

Group of orthologs #108. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 T.brucei:73

P0CD81              	100.00%		Q38DP2              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for Q38DP2 as seed ortholog is 100%.

Group of orthologs #109. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.brucei:72

O84686              	100.00%		Q57W99              	100.00%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for Q57W99 as seed ortholog is 100%.

Group of orthologs #110. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 T.brucei:71

O84469              	100.00%		Q57WP9              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for Q57WP9 as seed ortholog is 100%.

Group of orthologs #111. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 T.brucei:68

P0CE03              	100.00%		Q4FKG9              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for Q4FKG9 as seed ortholog is 100%.

Group of orthologs #112. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 T.brucei:66

O84189              	100.00%		Q385D6              	100.00%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for Q385D6 as seed ortholog is 100%.

Group of orthologs #113. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 T.brucei:66

O84284              	100.00%		Q38E17              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for Q38E17 as seed ortholog is 100%.

Group of orthologs #114. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 T.brucei:63

O84703              	100.00%		Q382X2              	100.00%
Bootstrap support for O84703 as seed ortholog is 100%.
Bootstrap support for Q382X2 as seed ortholog is 100%.

Group of orthologs #115. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 T.brucei:61

P0A4C8              	100.00%		Q388D3              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for Q388D3 as seed ortholog is 100%.

Group of orthologs #116. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 T.brucei:10

O84665              	100.00%		Q38FJ3              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for Q38FJ3 as seed ortholog is 60%.
Alternative seed ortholog is Q583P3 (10 bits away from this cluster)

Group of orthologs #117. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 T.brucei:60

O84218              	100.00%		Q38DX8              	100.00%
                    	       		Q385A1              	26.36%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for Q38DX8 as seed ortholog is 100%.

Group of orthologs #118. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 T.brucei:19

O84353              	100.00%		Q382A9              	100.00%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for Q382A9 as seed ortholog is 67%.
Alternative seed ortholog is Q4GYP5 (19 bits away from this cluster)

Group of orthologs #119. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 T.brucei:4

O84544              	100.00%		Q38FJ1              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for Q38FJ1 as seed ortholog is 43%.
Alternative seed ortholog is Q582J4 (4 bits away from this cluster)

Group of orthologs #120. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 T.brucei:58

O84771              	100.00%		Q582P5              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for Q582P5 as seed ortholog is 100%.

Group of orthologs #121. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 T.brucei:54

O84108              	100.00%		Q584W6              	100.00%
                    	       		Q57ZP6              	5.91%
Bootstrap support for O84108 as seed ortholog is 100%.
Bootstrap support for Q584W6 as seed ortholog is 100%.

Group of orthologs #122. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 T.brucei:54

P36424              	100.00%		Q584T9              	100.00%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for Q584T9 as seed ortholog is 100%.

Group of orthologs #123. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 T.brucei:53

O84527              	100.00%		Q389I7              	100.00%
                    	       		Q38EW1              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for Q389I7 as seed ortholog is 100%.
Bootstrap support for Q38EW1 as seed ortholog is 100%.

Group of orthologs #124. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 T.brucei:53

P0CE04              	100.00%		Q38B69              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for Q38B69 as seed ortholog is 100%.

Group of orthologs #125. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.brucei:52

P0CD80              	100.00%		Q38E34              	100.00%
                    	       		Q384K0              	47.85%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for Q38E34 as seed ortholog is 100%.

Group of orthologs #126. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 T.brucei:52

P0C0Z8              	100.00%		Q57WR6              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for Q57WR6 as seed ortholog is 100%.

Group of orthologs #127. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 T.brucei:51

O84682              	100.00%		Q38EV1              	100.00%
                    	       		Q38EU9              	94.08%
                    	       		Q38EV2              	92.50%
Bootstrap support for O84682 as seed ortholog is 100%.
Bootstrap support for Q38EV1 as seed ortholog is 100%.

Group of orthologs #128. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 T.brucei:50

O84779              	100.00%		Q38EU6              	100.00%
                    	       		Q57ZU5              	13.01%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for Q38EU6 as seed ortholog is 100%.

Group of orthologs #129. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 T.brucei:50

P66370              	100.00%		Q38CD1              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for Q38CD1 as seed ortholog is 100%.

Group of orthologs #130. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 T.brucei:50

O84496              	100.00%		Q581X7              	100.00%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for Q581X7 as seed ortholog is 100%.

Group of orthologs #131. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.brucei:47

O84258              	100.00%		Q583J6              	100.00%
O84430              	5.05%		Q388N3              	17.27%
Bootstrap support for O84258 as seed ortholog is 100%.
Bootstrap support for Q583J6 as seed ortholog is 100%.

Group of orthologs #132. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.brucei:47

O84395              	100.00%		Q389E5              	100.00%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for Q389E5 as seed ortholog is 100%.

Group of orthologs #133. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 T.brucei:46

O84128              	100.00%		Q57VV0              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for Q57VV0 as seed ortholog is 100%.

Group of orthologs #134. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 T.brucei:45

O84762              	100.00%		Q383N4              	100.00%
Bootstrap support for O84762 as seed ortholog is 100%.
Bootstrap support for Q383N4 as seed ortholog is 100%.

Group of orthologs #135. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 T.brucei:44

O84191              	100.00%		Q581B1              	100.00%
                    	       		Q57YW2              	98.63%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for Q581B1 as seed ortholog is 100%.

Group of orthologs #136. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 T.brucei:42

P0CE06              	100.00%		Q385D9              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for Q385D9 as seed ortholog is 100%.