###################################
187 groups of orthologs
192 in-paralogs from C.trachomatis
260 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 831 bits
Score difference with first non-orthologous sequence - C.trachomatis:831 S.stipitis:596

O84022              	100.00%		A3LTD7              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #2. Best score 731 bits
Score difference with first non-orthologous sequence - C.trachomatis:731 S.stipitis:731

O84250              	100.00%		A3LWF3              	100.00%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for A3LWF3 as seed ortholog is 100%.

Group of orthologs #3. Best score 678 bits
Score difference with first non-orthologous sequence - C.trachomatis:204 S.stipitis:49

O84115              	100.00%		A3LN85              	100.00%
Bootstrap support for O84115 as seed ortholog is 100%.
Bootstrap support for A3LN85 as seed ortholog is 83%.

Group of orthologs #4. Best score 676 bits
Score difference with first non-orthologous sequence - C.trachomatis:676 S.stipitis:116

P17821              	100.00%		A3LYI6              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for A3LYI6 as seed ortholog is 99%.

Group of orthologs #5. Best score 572 bits
Score difference with first non-orthologous sequence - C.trachomatis:572 S.stipitis:572

O84348              	100.00%		A3M072              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for A3M072 as seed ortholog is 100%.

Group of orthologs #6. Best score 561 bits
Score difference with first non-orthologous sequence - C.trachomatis:363 S.stipitis:478

P0C0Z7              	100.00%		A3LXU1              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #7. Best score 532 bits
Score difference with first non-orthologous sequence - C.trachomatis:532 S.stipitis:532

O84057              	100.00%		A3LZW8              	100.00%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #8. Best score 513 bits
Score difference with first non-orthologous sequence - C.trachomatis:513 S.stipitis:374

O84304              	100.00%		A3LVX8              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #9. Best score 511 bits
Score difference with first non-orthologous sequence - C.trachomatis:511 S.stipitis:134

O84444              	100.00%		A3GHT9              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for A3GHT9 as seed ortholog is 99%.

Group of orthologs #10. Best score 507 bits
Score difference with first non-orthologous sequence - C.trachomatis:507 S.stipitis:507

O84754              	100.00%		A3LRI3              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #11. Best score 506 bits
Score difference with first non-orthologous sequence - C.trachomatis:506 S.stipitis:367

O84067              	100.00%		A3LW22              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #12. Best score 483 bits
Score difference with first non-orthologous sequence - C.trachomatis:483 S.stipitis:483

O84066              	100.00%		A3GI40              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for A3GI40 as seed ortholog is 100%.

Group of orthologs #13. Best score 480 bits
Score difference with first non-orthologous sequence - C.trachomatis:480 S.stipitis:320

P0CD71              	100.00%		A3LX50              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #14. Best score 475 bits
Score difference with first non-orthologous sequence - C.trachomatis:475 S.stipitis:173

O84585              	100.00%		A3LWK8              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 99%.

Group of orthologs #15. Best score 470 bits
Score difference with first non-orthologous sequence - C.trachomatis:470 S.stipitis:427

O84863              	100.00%		A3GEV9              	100.00%
                    	       		A3M058              	50.82%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for A3GEV9 as seed ortholog is 100%.

Group of orthologs #16. Best score 468 bits
Score difference with first non-orthologous sequence - C.trachomatis:468 S.stipitis:468

O84834              	100.00%		A3LNA5              	100.00%
                    	       		A3LP83              	42.16%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 100%.

Group of orthologs #17. Best score 468 bits
Score difference with first non-orthologous sequence - C.trachomatis:468 S.stipitis:468

O84755              	100.00%		P34736              	100.00%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for P34736 as seed ortholog is 100%.

Group of orthologs #18. Best score 460 bits
Score difference with first non-orthologous sequence - C.trachomatis:460 S.stipitis:371

O84211              	100.00%		A3LRH3              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for A3LRH3 as seed ortholog is 100%.

Group of orthologs #19. Best score 425 bits
Score difference with first non-orthologous sequence - C.trachomatis:425 S.stipitis:425

P0CD73              	100.00%		A3LWW5              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for A3LWW5 as seed ortholog is 100%.

Group of orthologs #20. Best score 408 bits
Score difference with first non-orthologous sequence - C.trachomatis:408 S.stipitis:24

O84848              	100.00%		A3LMU7              	100.00%
                    	       		A3LNZ1              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for A3LMU7 as seed ortholog is 60%.
Alternative seed ortholog is A3GFA4 (24 bits away from this cluster)
Bootstrap support for A3LNZ1 as seed ortholog is 67%.
Alternative seed ortholog is A3GFA4 (24 bits away from this cluster)

Group of orthologs #21. Best score 401 bits
Score difference with first non-orthologous sequence - C.trachomatis:401 S.stipitis:401

Q59321              	100.00%		A3LVS2              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #22. Best score 383 bits
Score difference with first non-orthologous sequence - C.trachomatis:383 S.stipitis:383

P0CE13              	100.00%		A3LQ70              	100.00%
                    	       		A3LZZ7              	63.31%
                    	       		A3LNP7              	58.99%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #23. Best score 377 bits
Score difference with first non-orthologous sequence - C.trachomatis:377 S.stipitis:377

O84172              	100.00%		A3GH63              	100.00%
Bootstrap support for O84172 as seed ortholog is 100%.
Bootstrap support for A3GH63 as seed ortholog is 100%.

Group of orthologs #24. Best score 369 bits
Score difference with first non-orthologous sequence - C.trachomatis:369 S.stipitis:369

O84591              	100.00%		A3LQD6              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #25. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:364 S.stipitis:216

O84098              	100.00%		A3LY41              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #26. Best score 346 bits
Score difference with first non-orthologous sequence - C.trachomatis:346 S.stipitis:346

O84101              	100.00%		A3LVL9              	100.00%
Bootstrap support for O84101 as seed ortholog is 100%.
Bootstrap support for A3LVL9 as seed ortholog is 100%.

Group of orthologs #27. Best score 342 bits
Score difference with first non-orthologous sequence - C.trachomatis:342 S.stipitis:167

O84561              	100.00%		A3LYY5              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for A3LYY5 as seed ortholog is 99%.

Group of orthologs #28. Best score 334 bits
Score difference with first non-orthologous sequence - C.trachomatis:334 S.stipitis:214

O84035              	100.00%		A3LNS2              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for A3LNS2 as seed ortholog is 99%.

Group of orthologs #29. Best score 319 bits
Score difference with first non-orthologous sequence - C.trachomatis:319 S.stipitis:319

O84248              	100.00%		A3LYM2              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #30. Best score 318 bits
Score difference with first non-orthologous sequence - C.trachomatis:318 S.stipitis:318

O84823              	100.00%		A3LUH0              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #31. Best score 307 bits
Score difference with first non-orthologous sequence - C.trachomatis:307 S.stipitis:307

P0CD78              	100.00%		A3LUY2              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #32. Best score 305 bits
Score difference with first non-orthologous sequence - C.trachomatis:305 S.stipitis:305

O84829              	100.00%		A3GFF3              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #33. Best score 303 bits
Score difference with first non-orthologous sequence - C.trachomatis:303 S.stipitis:303

O84775              	100.00%		A3LZS7              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #34. Best score 295 bits
Score difference with first non-orthologous sequence - C.trachomatis:295 S.stipitis:113

O84786              	100.00%		A3GEX5              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for A3GEX5 as seed ortholog is 99%.

Group of orthologs #35. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 S.stipitis:290

P0CE09              	100.00%		A3LP81              	100.00%
                    	       		A3GFG5              	20.13%
                    	       		A3LWA8              	5.32%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for A3LP81 as seed ortholog is 100%.

Group of orthologs #36. Best score 282 bits
Score difference with first non-orthologous sequence - C.trachomatis:282 S.stipitis:282

O84316              	100.00%		A3GID7              	100.00%
                    	       		A3GEY3              	15.20%
                    	       		A3LYS3              	7.46%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #37. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 S.stipitis:171

O84831              	100.00%		A3LQ15              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for A3LQ15 as seed ortholog is 99%.

Group of orthologs #38. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 S.stipitis:280

P0CE21              	100.00%		A3LUJ3              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #39. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 S.stipitis:279

O84451              	100.00%		A3LQV1              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for A3LQV1 as seed ortholog is 100%.

Group of orthologs #40. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 S.stipitis:279

O84315              	100.00%		A3M0D0              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #41. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 S.stipitis:19

O84797              	100.00%		A3M094              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for A3M094 as seed ortholog is 74%.
Alternative seed ortholog is A3GHU7 (19 bits away from this cluster)

Group of orthologs #42. Best score 272 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 S.stipitis:272

O84058              	100.00%		A3LYY4              	100.00%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #43. Best score 272 bits
Score difference with first non-orthologous sequence - C.trachomatis:272 S.stipitis:272

O84188              	100.00%		A3LYR5              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #44. Best score 268 bits
Score difference with first non-orthologous sequence - C.trachomatis:268 S.stipitis:161

O84006              	100.00%		A3LNS1              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for A3LNS1 as seed ortholog is 99%.

Group of orthologs #45. Best score 261 bits
Score difference with first non-orthologous sequence - C.trachomatis:261 S.stipitis:120

O84546              	100.00%		A3LXG1              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for A3LXG1 as seed ortholog is 99%.

Group of orthologs #46. Best score 257 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 S.stipitis:119

O84614              	100.00%		A3LZR3              	100.00%
Bootstrap support for O84614 as seed ortholog is 99%.
Bootstrap support for A3LZR3 as seed ortholog is 99%.

Group of orthologs #47. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:255 S.stipitis:255

O84439              	100.00%		A3LY87              	100.00%
                    	       		A3LRJ3              	45.18%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for A3LY87 as seed ortholog is 100%.

Group of orthologs #48. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:137 S.stipitis:189

O84309              	100.00%		A3LY21              	100.00%
Bootstrap support for O84309 as seed ortholog is 99%.
Bootstrap support for A3LY21 as seed ortholog is 99%.

Group of orthologs #49. Best score 253 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 S.stipitis:253

O84828              	100.00%		A3LP98              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #50. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:250 S.stipitis:250

O84562              	100.00%		A3GGJ5              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #51. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 S.stipitis:250

O84249              	100.00%		A3LSC7              	100.00%
Bootstrap support for O84249 as seed ortholog is 97%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #52. Best score 247 bits
Score difference with first non-orthologous sequence - C.trachomatis:247 S.stipitis:247

P0CD72              	100.00%		A3LXX9              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for A3LXX9 as seed ortholog is 100%.

Group of orthologs #53. Best score 239 bits
Score difference with first non-orthologous sequence - C.trachomatis:239 S.stipitis:239

O84373              	100.00%		A3LYZ8              	100.00%
Bootstrap support for O84373 as seed ortholog is 100%.
Bootstrap support for A3LYZ8 as seed ortholog is 100%.

Group of orthologs #54. Best score 238 bits
Score difference with first non-orthologous sequence - C.trachomatis:238 S.stipitis:238

O84787              	100.00%		A3GHT7              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #55. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 S.stipitis:237

O84026              	100.00%		A3LTN5              	100.00%
Bootstrap support for O84026 as seed ortholog is 99%.
Bootstrap support for A3LTN5 as seed ortholog is 100%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - C.trachomatis:232 S.stipitis:142

O84352              	100.00%		A3GFD8              	100.00%
                    	       		A3LTX5              	10.73%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for A3GFD8 as seed ortholog is 99%.

Group of orthologs #57. Best score 230 bits
Score difference with first non-orthologous sequence - C.trachomatis:230 S.stipitis:230

O84698              	100.00%		A3GGL3              	100.00%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #58. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 S.stipitis:228

O84094              	100.00%		A3GG17              	100.00%
                    	       		A3M0J8              	24.69%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for A3GG17 as seed ortholog is 100%.

Group of orthologs #59. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 S.stipitis:128

O84596              	100.00%		A3GF06              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 99%.

Group of orthologs #60. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 S.stipitis:225

O84065              	100.00%		A3LUW1              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for A3LUW1 as seed ortholog is 100%.

Group of orthologs #61. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:223 S.stipitis:223

O84642              	100.00%		A3GGR0              	100.00%
                    	       		A3LZ01              	12.60%
                    	       		A3GGD7              	6.76%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for A3GGR0 as seed ortholog is 100%.

Group of orthologs #62. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 S.stipitis:218

O84423              	100.00%		A3LP86              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #63. Best score 211 bits
Score difference with first non-orthologous sequence - C.trachomatis:211 S.stipitis:211

O84638              	100.00%		A3LN97              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for A3LN97 as seed ortholog is 100%.

Group of orthologs #64. Best score 209 bits
Score difference with first non-orthologous sequence - C.trachomatis:209 S.stipitis:88

O84812              	100.00%		A3LRI0              	100.00%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for A3LRI0 as seed ortholog is 91%.

Group of orthologs #65. Best score 209 bits
Score difference with first non-orthologous sequence - C.trachomatis:209 S.stipitis:24

O84734              	100.00%		A3LUT6              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for A3LUT6 as seed ortholog is 70%.
Alternative seed ortholog is A3LUE7 (24 bits away from this cluster)

Group of orthologs #66. Best score 208 bits
Score difference with first non-orthologous sequence - C.trachomatis:208 S.stipitis:208

O84859              	100.00%		A3GEY7              	100.00%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #67. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 S.stipitis:207

O84266              	100.00%		A3LR17              	100.00%
                    	       		A3LRF7              	18.61%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for A3LR17 as seed ortholog is 100%.

Group of orthologs #68. Best score 205 bits
Score difference with first non-orthologous sequence - C.trachomatis:205 S.stipitis:205

O84007              	100.00%		A3GFV6              	100.00%
Bootstrap support for O84007 as seed ortholog is 100%.
Bootstrap support for A3GFV6 as seed ortholog is 100%.

Group of orthologs #69. Best score 204 bits
Score difference with first non-orthologous sequence - C.trachomatis:204 S.stipitis:204

O84289              	100.00%		A3GGU9              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for A3GGU9 as seed ortholog is 100%.

Group of orthologs #70. Best score 200 bits
Score difference with first non-orthologous sequence - C.trachomatis:200 S.stipitis:17

O84345              	100.00%		A3LVB6              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for A3LVB6 as seed ortholog is 79%.

Group of orthologs #71. Best score 196 bits
Score difference with first non-orthologous sequence - C.trachomatis:196 S.stipitis:152

O84297              	100.00%		A3LZK5              	100.00%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for A3LZK5 as seed ortholog is 99%.

Group of orthologs #72. Best score 194 bits
Score difference with first non-orthologous sequence - C.trachomatis:194 S.stipitis:118

P36431              	100.00%		A3M0H9              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for A3M0H9 as seed ortholog is 99%.

Group of orthologs #73. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 S.stipitis:188

O84402              	100.00%		A3GHZ1              	100.00%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 100%.

Group of orthologs #74. Best score 186 bits
Score difference with first non-orthologous sequence - C.trachomatis:186 S.stipitis:186

O84460              	100.00%		A3GFH1              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for A3GFH1 as seed ortholog is 100%.

Group of orthologs #75. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 S.stipitis:90

O84028              	100.00%		A3LXN7              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for A3LXN7 as seed ortholog is 99%.

Group of orthologs #76. Best score 182 bits
Score difference with first non-orthologous sequence - C.trachomatis:182 S.stipitis:182

O84247              	100.00%		A3GEX9              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #77. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 S.stipitis:93

O84530              	100.00%		A3LNH9              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for A3LNH9 as seed ortholog is 99%.

Group of orthologs #78. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 S.stipitis:121

O84296              	100.00%		A3M0N6              	100.00%
                    	       		A3GFH2              	50.20%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for A3M0N6 as seed ortholog is 100%.

Group of orthologs #79. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 S.stipitis:38

O84676              	100.00%		A3LST8              	100.00%
O84722              	10.78%		
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for A3LST8 as seed ortholog is 84%.

Group of orthologs #80. Best score 174 bits
Score difference with first non-orthologous sequence - C.trachomatis:174 S.stipitis:174

O84630              	100.00%		A3LQ27              	100.00%
Bootstrap support for O84630 as seed ortholog is 100%.
Bootstrap support for A3LQ27 as seed ortholog is 100%.

Group of orthologs #81. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 S.stipitis:170

O84704              	100.00%		A3LMT2              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for A3LMT2 as seed ortholog is 100%.

Group of orthologs #82. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 S.stipitis:170

O84720              	100.00%		A3LVQ3              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for A3LVQ3 as seed ortholog is 100%.

Group of orthologs #83. Best score 167 bits
Score difference with first non-orthologous sequence - C.trachomatis:167 S.stipitis:27

O84732              	100.00%		A3GG72              	100.00%
                    	       		A3LVL5              	7.81%
                    	       		A3LRS8              	7.10%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for A3GG72 as seed ortholog is 75%.

Group of orthologs #84. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 S.stipitis:166

O84874              	100.00%		A3LQS2              	100.00%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for A3LQS2 as seed ortholog is 100%.

Group of orthologs #85. Best score 164 bits
Score difference with first non-orthologous sequence - C.trachomatis:164 S.stipitis:164

O84332              	100.00%		A3LZL0              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #86. Best score 163 bits
Score difference with first non-orthologous sequence - C.trachomatis:163 S.stipitis:71

O84608              	100.00%		A3LQ08              	100.00%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for A3LQ08 as seed ortholog is 99%.

Group of orthologs #87. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 S.stipitis:70

O84478              	100.00%		A3LZY3              	100.00%
                    	       		A3LWB2              	10.04%
Bootstrap support for O84478 as seed ortholog is 100%.
Bootstrap support for A3LZY3 as seed ortholog is 96%.

Group of orthologs #88. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 S.stipitis:160

O84579              	100.00%		A3LSY2              	100.00%
Bootstrap support for O84579 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #89. Best score 157 bits
Score difference with first non-orthologous sequence - C.trachomatis:157 S.stipitis:157

O84727              	100.00%		A3LN94              	100.00%
                    	       		A3LXD2              	19.47%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for A3LN94 as seed ortholog is 100%.

Group of orthologs #90. Best score 150 bits
Score difference with first non-orthologous sequence - C.trachomatis:150 S.stipitis:150

O84613              	100.00%		A3LQ24              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #91. Best score 149 bits
Score difference with first non-orthologous sequence - C.trachomatis:149 S.stipitis:149

O84368              	100.00%		A3LUL1              	100.00%
Bootstrap support for O84368 as seed ortholog is 100%.
Bootstrap support for A3LUL1 as seed ortholog is 100%.

Group of orthologs #92. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 S.stipitis:148

O84835              	100.00%		A3LNC1              	100.00%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #93. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:36 S.stipitis:145

O84260              	100.00%		A3M0K6              	100.00%
Bootstrap support for O84260 as seed ortholog is 57%.
Alternative seed ortholog is O84693 (36 bits away from this cluster)
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #94. Best score 144 bits
Score difference with first non-orthologous sequence - C.trachomatis:144 S.stipitis:144

O84123              	100.00%		A3M0L9              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #95. Best score 142 bits
Score difference with first non-orthologous sequence - C.trachomatis:142 S.stipitis:142

O84771              	100.00%		A3LQ89              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for A3LQ89 as seed ortholog is 100%.

Group of orthologs #96. Best score 137 bits
Score difference with first non-orthologous sequence - C.trachomatis:137 S.stipitis:4

P38004              	100.00%		A3LZU7              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for A3LZU7 as seed ortholog is 42%.
Alternative seed ortholog is A3GF07 (4 bits away from this cluster)

Group of orthologs #97. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 S.stipitis:88

P66370              	100.00%		A3GFR4              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for A3GFR4 as seed ortholog is 100%.

Group of orthologs #98. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 S.stipitis:134

O84033              	100.00%		A3LVL2              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for A3LVL2 as seed ortholog is 100%.

Group of orthologs #99. Best score 133 bits
Score difference with first non-orthologous sequence - C.trachomatis:133 S.stipitis:133

O84096              	100.00%		A3LZC9              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for A3LZC9 as seed ortholog is 100%.

Group of orthologs #100. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 S.stipitis:132

O84649              	100.00%		A3GHH1              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #101. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 S.stipitis:86

O84589              	100.00%		A3LVM5              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for A3LVM5 as seed ortholog is 96%.

Group of orthologs #102. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 S.stipitis:125

O84752              	100.00%		A3LW87              	100.00%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for A3LW87 as seed ortholog is 100%.

Group of orthologs #103. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 S.stipitis:119

O84492              	100.00%		A3LYF6              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for A3LYF6 as seed ortholog is 100%.

Group of orthologs #104. Best score 117 bits
Score difference with first non-orthologous sequence - C.trachomatis:117 S.stipitis:117

O84456              	100.00%		A3GHZ7              	100.00%
                    	       		A3LQN4              	17.14%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for A3GHZ7 as seed ortholog is 100%.

Group of orthologs #105. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 S.stipitis:32

O84130              	100.00%		A3M0P2              	100.00%
                    	       		A3LV51              	9.82%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for A3M0P2 as seed ortholog is 83%.

Group of orthologs #106. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 S.stipitis:116

O84463              	100.00%		A3LT61              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for A3LT61 as seed ortholog is 100%.

Group of orthologs #107. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 S.stipitis:111

O84619              	100.00%		A3LZB4              	100.00%
Bootstrap support for O84619 as seed ortholog is 100%.
Bootstrap support for A3LZB4 as seed ortholog is 100%.

Group of orthologs #108. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 S.stipitis:109

O84533              	100.00%		A3GH24              	100.00%
Bootstrap support for O84533 as seed ortholog is 100%.
Bootstrap support for A3GH24 as seed ortholog is 100%.

Group of orthologs #109. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 S.stipitis:33

O84843              	100.00%		A3LRA4              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for A3LRA4 as seed ortholog is 72%.
Alternative seed ortholog is A3LMT5 (33 bits away from this cluster)

Group of orthologs #110. Best score 105 bits
Score difference with first non-orthologous sequence - C.trachomatis:105 S.stipitis:105

O84779              	100.00%		A3LUV9              	100.00%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #111. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 S.stipitis:104

O84508              	100.00%		A3LVN3              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #112. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 S.stipitis:39

P0CD81              	100.00%		A3LWK9              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for A3LWK9 as seed ortholog is 96%.

Group of orthologs #113. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 S.stipitis:100

O84212              	100.00%		A3LSS9              	100.00%
                    	       		A3GF49              	13.86%
                    	       		A3GF39              	5.31%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for A3LSS9 as seed ortholog is 100%.

Group of orthologs #114. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 S.stipitis:98

O84367              	100.00%		A3GF89              	100.00%
Bootstrap support for O84367 as seed ortholog is 100%.
Bootstrap support for A3GF89 as seed ortholog is 100%.

Group of orthologs #115. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 S.stipitis:97

P55137              	100.00%		A3GFI1              	100.00%
                    	       		A3M0D5              	16.41%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for A3GFI1 as seed ortholog is 100%.

Group of orthologs #116. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 S.stipitis:97

O84719              	100.00%		A3LYI9              	100.00%
                    	       		A3LU81              	55.14%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for A3LYI9 as seed ortholog is 100%.

Group of orthologs #117. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 S.stipitis:97

O84321              	100.00%		A3LNL6              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for A3LNL6 as seed ortholog is 100%.

Group of orthologs #118. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 S.stipitis:97

O84578              	100.00%		A3LPU9              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for A3LPU9 as seed ortholog is 100%.

Group of orthologs #119. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 S.stipitis:95

O84410              	100.00%		A3LQN1              	100.00%
Bootstrap support for O84410 as seed ortholog is 100%.
Bootstrap support for A3LQN1 as seed ortholog is 100%.

Group of orthologs #120. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 S.stipitis:94

O84294              	100.00%		A3GFI7              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for A3GFI7 as seed ortholog is 100%.

Group of orthologs #121. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 S.stipitis:94

O84358              	100.00%		A3GI57              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #122. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 S.stipitis:12

O84200              	100.00%		A3LSY4              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for A3LSY4 as seed ortholog is 61%.
Alternative seed ortholog is A3LS68 (12 bits away from this cluster)

Group of orthologs #123. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:87

O84338              	100.00%		A3LWJ5              	100.00%
                    	       		A3LVH9              	16.27%
                    	       		A3GID9              	15.96%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #124. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:87

O84737              	100.00%		A3GFV7              	100.00%
Bootstrap support for O84737 as seed ortholog is 100%.
Bootstrap support for A3GFV7 as seed ortholog is 100%.

Group of orthologs #125. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:11

O84544              	100.00%		A3GI91              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for A3GI91 as seed ortholog is 75%.

Group of orthologs #126. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:87

O84215              	100.00%		A3LP13              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for A3LP13 as seed ortholog is 100%.

Group of orthologs #127. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:87

O84435              	100.00%		A3LUJ2              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #128. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:87

O84301              	100.00%		A3LW77              	100.00%
Bootstrap support for O84301 as seed ortholog is 100%.
Bootstrap support for A3LW77 as seed ortholog is 100%.

Group of orthologs #129. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.stipitis:87

O84081              	100.00%		A3LYP8              	100.00%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #130. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 S.stipitis:86

O84864              	100.00%		A3GGG6              	100.00%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for A3GGG6 as seed ortholog is 100%.

Group of orthologs #131. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 S.stipitis:85

O84442              	100.00%		A3LMT4              	100.00%
                    	       		A3LTK0              	8.95%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #132. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 S.stipitis:85

O84595              	100.00%		A3M027              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #133. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 S.stipitis:84

O84650              	100.00%		A3LZG1              	100.00%
                    	       		A3LTU9              	5.86%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for A3LZG1 as seed ortholog is 100%.

Group of orthologs #134. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 S.stipitis:84

O84139              	100.00%		A3M0L4              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for A3M0L4 as seed ortholog is 100%.

Group of orthologs #135. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 S.stipitis:83

O84241              	100.00%		A3LP92              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for A3LP92 as seed ortholog is 100%.

Group of orthologs #136. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 S.stipitis:81

P0CE01              	100.00%		A3GH23              	100.00%
Bootstrap support for P0CE01 as seed ortholog is 100%.
Bootstrap support for A3GH23 as seed ortholog is 100%.

Group of orthologs #137. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 S.stipitis:80

O84320              	100.00%		A3LZH6              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for A3LZH6 as seed ortholog is 100%.

Group of orthologs #138. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 S.stipitis:79

O84391              	100.00%		A3LR59              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #139. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 S.stipitis:35

O84127              	100.00%		A3GFG6              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for A3GFG6 as seed ortholog is 93%.

Group of orthologs #140. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 S.stipitis:23

O84822              	100.00%		A3GI60              	100.00%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 69%.
Alternative seed ortholog is A3LQX4 (23 bits away from this cluster)

Group of orthologs #141. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 S.stipitis:74

O84307              	100.00%		A3LUS8              	100.00%
                    	       		A3GF60              	37.79%
Bootstrap support for O84307 as seed ortholog is 100%.
Bootstrap support for A3LUS8 as seed ortholog is 100%.

Group of orthologs #142. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 S.stipitis:30

P0CD88              	100.00%		A3LYH4              	100.00%
Bootstrap support for P0CD88 as seed ortholog is 100%.
Bootstrap support for A3LYH4 as seed ortholog is 88%.

Group of orthologs #143. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 S.stipitis:71

O84527              	100.00%		A3LP59              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #144. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 S.stipitis:24

O84806              	100.00%		A3LPP1              	100.00%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for A3LPP1 as seed ortholog is 77%.

Group of orthologs #145. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 S.stipitis:70

O84833              	100.00%		A3GFM0              	100.00%
Bootstrap support for O84833 as seed ortholog is 100%.
Bootstrap support for A3GFM0 as seed ortholog is 100%.

Group of orthologs #146. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.stipitis:69

O84189              	100.00%		A3LPA4              	100.00%
                    	       		A3LW67              	20.40%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for A3LPA4 as seed ortholog is 100%.

Group of orthologs #147. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.stipitis:69

O84469              	100.00%		A3LX03              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #148. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 S.stipitis:68

P0A4C8              	100.00%		A3GFH5              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #149. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 S.stipitis:67

P0CE03              	100.00%		A3LQJ1              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #150. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 S.stipitis:67

O84353              	100.00%		A3LSC0              	100.00%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for A3LSC0 as seed ortholog is 100%.

Group of orthologs #151. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 S.stipitis:67

O84027              	100.00%		A3M091              	100.00%
Bootstrap support for O84027 as seed ortholog is 100%.
Bootstrap support for A3M091 as seed ortholog is 100%.

Group of orthologs #152. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 S.stipitis:66

O84218              	100.00%		A3LSN9              	100.00%
                    	       		A3GET0              	74.50%
                    	       		A3LRB7              	25.90%
                    	       		A3GGS5              	25.20%
                    	       		A3LNX9              	22.09%
                    	       		A3GG77              	21.99%
                    	       		A3LS65              	21.69%
                    	       		A3GFL8              	21.59%
                    	       		A3LRB6              	20.88%
                    	       		A3GF84              	20.28%
                    	       		A3LUX3              	20.08%
                    	       		A3LVM7              	19.68%
                    	       		A3LWY1              	19.38%
                    	       		A3LZA0              	18.47%
                    	       		A3GHU4              	18.17%
                    	       		A3LVE5              	16.16%
                    	       		A3LNV7              	15.66%
                    	       		A3LQF6              	15.06%
                    	       		A3GFQ1              	14.56%
                    	       		A3LUI5              	13.96%
                    	       		A3LUT5              	12.85%
                    	       		A3GGY0              	12.75%
                    	       		A3M039              	11.04%
                    	       		A3LPC8              	10.24%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for A3LSN9 as seed ortholog is 100%.

Group of orthologs #153. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 S.stipitis:66

O84284              	100.00%		A3GI53              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #154. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 S.stipitis:4

P0CE04              	100.00%		A3LSH2              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for A3LSH2 as seed ortholog is 53%.
Alternative seed ortholog is A3LWF6 (4 bits away from this cluster)

Group of orthologs #155. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 S.stipitis:24

O84395              	100.00%		A3LZQ4              	100.00%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for A3LZQ4 as seed ortholog is 71%.
Alternative seed ortholog is A3LYZ5 (24 bits away from this cluster)

Group of orthologs #156. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 S.stipitis:64

O84851              	100.00%		A3LN58              	100.00%
                    	       		A3LUZ5              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for A3LN58 as seed ortholog is 100%.
Bootstrap support for A3LUZ5 as seed ortholog is 100%.

Group of orthologs #157. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 S.stipitis:64

P0CD83              	100.00%		A3LMT6              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for A3LMT6 as seed ortholog is 100%.

Group of orthologs #158. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 S.stipitis:63

O84220              	100.00%		A3LWU7              	100.00%
                    	       		A3LWU6              	78.43%
Bootstrap support for O84220 as seed ortholog is 100%.
Bootstrap support for A3LWU7 as seed ortholog is 100%.

Group of orthologs #159. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 S.stipitis:63

O84535              	100.00%		A3GH60              	100.00%
Bootstrap support for O84535 as seed ortholog is 100%.
Bootstrap support for A3GH60 as seed ortholog is 100%.

Group of orthologs #160. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 S.stipitis:63

O84547              	100.00%		A3LQP9              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #161. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 S.stipitis:62

O84221              	100.00%		A3GIC9              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #162. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 S.stipitis:61

O84366              	100.00%		A3LZU9              	100.00%
                    	       		A3LQR8              	35.34%
                    	       		A3LSD2              	33.33%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for A3LZU9 as seed ortholog is 100%.

Group of orthologs #163. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:5 S.stipitis:61

O84503              	100.00%		A3GFA6              	100.00%
Bootstrap support for O84503 as seed ortholog is 59%.
Alternative seed ortholog is O84803 (5 bits away from this cluster)
Bootstrap support for A3GFA6 as seed ortholog is 100%.

Group of orthologs #164. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 S.stipitis:61

P0C0Z8              	100.00%		A3GGS7              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #165. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 S.stipitis:61

O84735              	100.00%		A3GI07              	100.00%
Bootstrap support for O84735 as seed ortholog is 100%.
Bootstrap support for A3GI07 as seed ortholog is 100%.

Group of orthologs #166. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 S.stipitis:61

P66480              	100.00%		A3LSJ1              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for A3LSJ1 as seed ortholog is 100%.

Group of orthologs #167. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 S.stipitis:60

O84499              	100.00%		A3LQL5              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #168. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 S.stipitis:60

P0CE06              	100.00%		A3LQM6              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for A3LQM6 as seed ortholog is 100%.

Group of orthologs #169. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 S.stipitis:57

O84390              	100.00%		A3LQG8              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #170. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:11 S.stipitis:56

O84183              	100.00%		A3LQD1              	100.00%
O84132              	7.09%		
O84660              	7.09%		
O84071              	5.82%		
O84154              	5.32%		
Bootstrap support for O84183 as seed ortholog is 65%.
Alternative seed ortholog is O84691 (11 bits away from this cluster)
Bootstrap support for A3LQD1 as seed ortholog is 100%.

Group of orthologs #171. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 S.stipitis:56

O84611              	100.00%		A3LVK6              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #172. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 S.stipitis:56

P0CE02              	100.00%		A3LZ30              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #173. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 S.stipitis:54

O84792              	100.00%		A3LQN0              	100.00%
Bootstrap support for O84792 as seed ortholog is 100%.
Bootstrap support for A3LQN0 as seed ortholog is 100%.

Group of orthologs #174. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 S.stipitis:54

P36424              	100.00%		A3M0H3              	100.00%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #175. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 S.stipitis:1

O84548              	100.00%		A3LSQ9              	100.00%
                    	       		A3LU62              	47.75%
                    	       		A3LT05              	45.70%
                    	       		A3LT06              	45.70%
                    	       		A3LV53              	35.43%
                    	       		A3GH19              	12.71%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for A3LSQ9 as seed ortholog is 49%.
Alternative seed ortholog is A3LZP0 (1 bits away from this cluster)

Group of orthologs #176. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 S.stipitis:53

O84381              	100.00%		A3LW84              	100.00%
                    	       		A3GH28              	46.35%
                    	       		A3GGD9              	39.06%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for A3LW84 as seed ortholog is 100%.

Group of orthologs #177. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 S.stipitis:52

O84618              	100.00%		A3LSL9              	100.00%
Bootstrap support for O84618 as seed ortholog is 100%.
Bootstrap support for A3LSL9 as seed ortholog is 100%.

Group of orthologs #178. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 S.stipitis:50

O84777              	100.00%		A3LTU4              	100.00%
                    	       		A3LQ79              	42.88%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 100%.

Group of orthologs #179. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 S.stipitis:50

O84741              	100.00%		A3LVG3              	100.00%
Bootstrap support for O84741 as seed ortholog is 100%.
Bootstrap support for A3LVG3 as seed ortholog is 100%.

Group of orthologs #180. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 S.stipitis:9

O84781              	100.00%		A3LVT4              	100.00%
                    	       		A3LT24              	44.65%
                    	       		A3LPC6              	42.44%
                    	       		A3LZE8              	34.38%
                    	       		A3LPV7              	33.52%
                    	       		A3GI75              	9.20%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for A3LVT4 as seed ortholog is 59%.
Alternative seed ortholog is A3LUY3 (9 bits away from this cluster)

Group of orthologs #181. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 S.stipitis:48

O84331              	100.00%		A3GFA8              	100.00%
Bootstrap support for O84331 as seed ortholog is 100%.
Bootstrap support for A3GFA8 as seed ortholog is 100%.

Group of orthologs #182. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 S.stipitis:48

O84633              	100.00%		A3LVI9              	100.00%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for A3LVI9 as seed ortholog is 100%.

Group of orthologs #183. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 S.stipitis:47

O84496              	100.00%		A3GET1              	100.00%
                    	       		A3GHU9              	10.77%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for A3GET1 as seed ortholog is 100%.

Group of orthologs #184. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 S.stipitis:47

O84684              	100.00%		A3M0B0              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for A3M0B0 as seed ortholog is 100%.

Group of orthologs #185. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 S.stipitis:46

O84219              	100.00%		A3GGB3              	100.00%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #186. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 S.stipitis:46

O84029              	100.00%		A3LWG1              	100.00%
Bootstrap support for O84029 as seed ortholog is 100%.
Bootstrap support for A3LWG1 as seed ortholog is 100%.

Group of orthologs #187. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 S.stipitis:44

O84138              	100.00%		A3LVD2              	100.00%
Bootstrap support for O84138 as seed ortholog is 100%.
Bootstrap support for A3LVD2 as seed ortholog is 100%.