###################################
288 groups of orthologs
295 in-paralogs from C.trachomatis
751 in-paralogs from S.italica
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 824 bits
Score difference with first non-orthologous sequence - C.trachomatis:824 S.italica:658

O84211              	100.00%		K3XE81              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for K3XE81 as seed ortholog is 100%.

Group of orthologs #2. Best score 823 bits
Score difference with first non-orthologous sequence - C.trachomatis:823 S.italica:527

O84022              	100.00%		K3XUW9              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for K3XUW9 as seed ortholog is 100%.

Group of orthologs #3. Best score 805 bits
Score difference with first non-orthologous sequence - C.trachomatis:805 S.italica:214

O84288              	100.00%		K3Z3M1              	100.00%
                    	       		K3Y516              	75.75%
                    	       		K3Y518              	75.54%
Bootstrap support for O84288 as seed ortholog is 100%.
Bootstrap support for K3Z3M1 as seed ortholog is 99%.

Group of orthologs #4. Best score 805 bits
Score difference with first non-orthologous sequence - C.trachomatis:805 S.italica:234

O84115              	100.00%		K4A5D2              	100.00%
                    	       		K3YPM2              	44.90%
Bootstrap support for O84115 as seed ortholog is 100%.
Bootstrap support for K4A5D2 as seed ortholog is 100%.

Group of orthologs #5. Best score 781 bits
Score difference with first non-orthologous sequence - C.trachomatis:781 S.italica:366

O84444              	100.00%		K3Y5D4              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for K3Y5D4 as seed ortholog is 100%.

Group of orthologs #6. Best score 740 bits
Score difference with first non-orthologous sequence - C.trachomatis:740 S.italica:50

P17821              	100.00%		K4A6N2              	100.00%
                    	       		K3ZRM5              	69.42%
                    	       		K3ZR11              	54.31%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for K4A6N2 as seed ortholog is 83%.

Group of orthologs #7. Best score 669 bits
Score difference with first non-orthologous sequence - C.trachomatis:669 S.italica:9

O84250              	100.00%		K3XEI9              	100.00%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for K3XEI9 as seed ortholog is 57%.
Alternative seed ortholog is K4A565 (9 bits away from this cluster)

Group of orthologs #8. Best score 668 bits
Score difference with first non-orthologous sequence - C.trachomatis:668 S.italica:87

O84067              	100.00%		K3YQL7              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for K3YQL7 as seed ortholog is 98%.

Group of orthologs #9. Best score 646 bits
Score difference with first non-orthologous sequence - C.trachomatis:646 S.italica:92

O84304              	100.00%		K3ZQE8              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for K3ZQE8 as seed ortholog is 90%.

Group of orthologs #10. Best score 611 bits
Score difference with first non-orthologous sequence - C.trachomatis:611 S.italica:611

O84707              	100.00%		K3XE49              	100.00%
Bootstrap support for O84707 as seed ortholog is 100%.
Bootstrap support for K3XE49 as seed ortholog is 100%.

Group of orthologs #11. Best score 592 bits
Score difference with first non-orthologous sequence - C.trachomatis:420 S.italica:52

P0C0Z7              	100.00%		K4A7N1              	100.00%
                    	       		K4A7Q9              	79.68%
                    	       		K3Z4I2              	37.65%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for K4A7N1 as seed ortholog is 96%.

Group of orthologs #12. Best score 589 bits
Score difference with first non-orthologous sequence - C.trachomatis:589 S.italica:589

P0CE22              	100.00%		K3XUY9              	100.00%
Bootstrap support for P0CE22 as seed ortholog is 100%.
Bootstrap support for K3XUY9 as seed ortholog is 100%.

Group of orthologs #13. Best score 586 bits
Score difference with first non-orthologous sequence - C.trachomatis:586 S.italica:586

O84192              	100.00%		K4A5H3              	100.00%
Bootstrap support for O84192 as seed ortholog is 100%.
Bootstrap support for K4A5H3 as seed ortholog is 100%.

Group of orthologs #14. Best score 569 bits
Score difference with first non-orthologous sequence - C.trachomatis:569 S.italica:569

O84057              	100.00%		K3ZQC3              	100.00%
                    	       		K3Y4V7              	80.24%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for K3ZQC3 as seed ortholog is 100%.

Group of orthologs #15. Best score 557 bits
Score difference with first non-orthologous sequence - C.trachomatis:557 S.italica:557

O84690              	100.00%		K3XGB4              	100.00%
Bootstrap support for O84690 as seed ortholog is 100%.
Bootstrap support for K3XGB4 as seed ortholog is 100%.

Group of orthologs #16. Best score 547 bits
Score difference with first non-orthologous sequence - C.trachomatis:547 S.italica:547

O84755              	100.00%		K3XVH0              	100.00%
                    	       		K3Y3N4              	71.73%
                    	       		K3XF05              	62.45%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for K3XVH0 as seed ortholog is 100%.

Group of orthologs #17. Best score 544 bits
Score difference with first non-orthologous sequence - C.trachomatis:544 S.italica:544

P0CD73              	100.00%		K3XE89              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for K3XE89 as seed ortholog is 100%.

Group of orthologs #18. Best score 535 bits
Score difference with first non-orthologous sequence - C.trachomatis:226 S.italica:535

O84068              	100.00%		K3XFJ5              	100.00%
                    	       		K3YQU7              	50.43%
Bootstrap support for O84068 as seed ortholog is 100%.
Bootstrap support for K3XFJ5 as seed ortholog is 100%.

Group of orthologs #19. Best score 515 bits
Score difference with first non-orthologous sequence - C.trachomatis:515 S.italica:315

O84046              	100.00%		K3ZQX5              	100.00%
                    	       		K3YGA9              	7.66%
Bootstrap support for O84046 as seed ortholog is 100%.
Bootstrap support for K3ZQX5 as seed ortholog is 100%.

Group of orthologs #20. Best score 514 bits
Score difference with first non-orthologous sequence - C.trachomatis:514 S.italica:58

O84754              	100.00%		K4A5A8              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for K4A5A8 as seed ortholog is 88%.

Group of orthologs #21. Best score 509 bits
Score difference with first non-orthologous sequence - C.trachomatis:509 S.italica:16

P0CD71              	100.00%		K3YS75              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for K3YS75 as seed ortholog is 83%.

Group of orthologs #22. Best score 508 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 S.italica:508

O84193              	100.00%		K3XEY7              	100.00%
Bootstrap support for O84193 as seed ortholog is 100%.
Bootstrap support for K3XEY7 as seed ortholog is 100%.

Group of orthologs #23. Best score 507 bits
Score difference with first non-orthologous sequence - C.trachomatis:507 S.italica:16

O84348              	100.00%		K3ZQD2              	100.00%
                    	       		K4A5A4              	67.66%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for K3ZQD2 as seed ortholog is 100%.

Group of orthologs #24. Best score 504 bits
Score difference with first non-orthologous sequence - C.trachomatis:504 S.italica:213

P0CE09              	100.00%		K3Z2V8              	100.00%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for K3Z2V8 as seed ortholog is 99%.

Group of orthologs #25. Best score 501 bits
Score difference with first non-orthologous sequence - C.trachomatis:501 S.italica:16

O84849              	100.00%		K3ZRF2              	100.00%
Bootstrap support for O84849 as seed ortholog is 100%.
Bootstrap support for K3ZRF2 as seed ortholog is 56%.
Alternative seed ortholog is K3YPM9 (16 bits away from this cluster)

Group of orthologs #26. Best score 499 bits
Score difference with first non-orthologous sequence - C.trachomatis:499 S.italica:8

O84585              	100.00%		K3XEW2              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for K3XEW2 as seed ortholog is 57%.
Alternative seed ortholog is K3ZRC1 (8 bits away from this cluster)

Group of orthologs #27. Best score 487 bits
Score difference with first non-orthologous sequence - C.trachomatis:487 S.italica:487

O84834              	100.00%		K3XVB6              	100.00%
                    	       		K3YYE5              	86.45%
                    	       		K3XHB1              	39.54%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for K3XVB6 as seed ortholog is 100%.

Group of orthologs #28. Best score 486 bits
Score difference with first non-orthologous sequence - C.trachomatis:486 S.italica:486

O84060              	100.00%		K3YQ87              	100.00%
Bootstrap support for O84060 as seed ortholog is 100%.
Bootstrap support for K3YQ87 as seed ortholog is 100%.

Group of orthologs #29. Best score 479 bits
Score difference with first non-orthologous sequence - C.trachomatis:479 S.italica:24

O84848              	100.00%		K3XVN4              	100.00%
                    	       		K3XVP0              	10.99%
                    	       		K3XVL6              	8.07%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for K3XVN4 as seed ortholog is 74%.
Alternative seed ortholog is K3XEM2 (24 bits away from this cluster)

Group of orthologs #30. Best score 473 bits
Score difference with first non-orthologous sequence - C.trachomatis:473 S.italica:179

O84775              	100.00%		K3Y757              	100.00%
                    	       		K3XWS5              	69.04%
                    	       		K4A322              	34.08%
                    	       		K4AJU4              	33.63%
                    	       		K3ZSL4              	11.80%
                    	       		K4A8Z0              	8.02%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for K3Y757 as seed ortholog is 99%.

Group of orthologs #31. Best score 463 bits
Score difference with first non-orthologous sequence - C.trachomatis:463 S.italica:415

O84863              	100.00%		K4A8Y9              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for K4A8Y9 as seed ortholog is 100%.

Group of orthologs #32. Best score 448 bits
Score difference with first non-orthologous sequence - C.trachomatis:448 S.italica:448

O84207              	100.00%		K3ZCX3              	100.00%
                    	       		K3YGY5              	7.60%
                    	       		K4A810              	6.01%
                    	       		K3ZS35              	5.12%
Bootstrap support for O84207 as seed ortholog is 100%.
Bootstrap support for K3ZCX3 as seed ortholog is 100%.

Group of orthologs #33. Best score 448 bits
Score difference with first non-orthologous sequence - C.trachomatis:448 S.italica:448

O84831              	100.00%		K3YPH2              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for K3YPH2 as seed ortholog is 100%.

Group of orthologs #34. Best score 433 bits
Score difference with first non-orthologous sequence - C.trachomatis:433 S.italica:433

Q59321              	100.00%		K3XFS0              	100.00%
                    	       		K3Z4L7              	67.30%
                    	       		K3XFN4              	65.41%
                    	       		K3Z4W5              	46.04%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for K3XFS0 as seed ortholog is 100%.

Group of orthologs #35. Best score 426 bits
Score difference with first non-orthologous sequence - C.trachomatis:426 S.italica:426

O84066              	100.00%		K3XH89              	100.00%
                    	       		K3XWM2              	95.85%
                    	       		K3ZIP7              	14.34%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for K3XH89 as seed ortholog is 100%.

Group of orthologs #36. Best score 424 bits
Score difference with first non-orthologous sequence - C.trachomatis:424 S.italica:424

O84460              	100.00%		K3Y5T4              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for K3Y5T4 as seed ortholog is 100%.

Group of orthologs #37. Best score 416 bits
Score difference with first non-orthologous sequence - C.trachomatis:416 S.italica:60

O84098              	100.00%		K3YPN2              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for K3YPN2 as seed ortholog is 89%.

Group of orthologs #38. Best score 414 bits
Score difference with first non-orthologous sequence - C.trachomatis:414 S.italica:280

O84546              	100.00%		K3ZRE1              	100.00%
                    	       		K3XR09              	58.72%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for K3ZRE1 as seed ortholog is 100%.

Group of orthologs #39. Best score 414 bits
Score difference with first non-orthologous sequence - C.trachomatis:414 S.italica:302

O84172              	100.00%		K3YHF8              	100.00%
Bootstrap support for O84172 as seed ortholog is 100%.
Bootstrap support for K3YHF8 as seed ortholog is 100%.

Group of orthologs #40. Best score 413 bits
Score difference with first non-orthologous sequence - C.trachomatis:413 S.italica:413

O84736              	100.00%		K3YRC6              	100.00%
                    	       		K3YH11              	48.88%
                    	       		K3Z6V1              	19.13%
Bootstrap support for O84736 as seed ortholog is 100%.
Bootstrap support for K3YRC6 as seed ortholog is 100%.

Group of orthologs #41. Best score 406 bits
Score difference with first non-orthologous sequence - C.trachomatis:406 S.italica:128

O84732              	100.00%		K3XVA3              	100.00%
                    	       		K4A6A4              	75.42%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for K3XVA3 as seed ortholog is 99%.

Group of orthologs #42. Best score 404 bits
Score difference with first non-orthologous sequence - C.trachomatis:404 S.italica:404

O84126              	100.00%		K3Z433              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for K3Z433 as seed ortholog is 100%.

Group of orthologs #43. Best score 402 bits
Score difference with first non-orthologous sequence - C.trachomatis:6 S.italica:59

O84210              	100.00%		K3XW48              	100.00%
                    	       		K3YZY0              	81.86%
Bootstrap support for O84210 as seed ortholog is 53%.
Alternative seed ortholog is O84208 (6 bits away from this cluster)
Bootstrap support for K3XW48 as seed ortholog is 92%.

Group of orthologs #44. Best score 391 bits
Score difference with first non-orthologous sequence - C.trachomatis:391 S.italica:325

O84106              	100.00%		K3ZUC6              	100.00%
                    	       		K3YI82              	60.42%
Bootstrap support for O84106 as seed ortholog is 100%.
Bootstrap support for K3ZUC6 as seed ortholog is 100%.

Group of orthologs #45. Best score 375 bits
Score difference with first non-orthologous sequence - C.trachomatis:313 S.italica:375

O84335              	100.00%		K3Z478              	100.00%
                    	       		K3ZR37              	60.28%
                    	       		K3XVI4              	35.38%
Bootstrap support for O84335 as seed ortholog is 100%.
Bootstrap support for K3Z478 as seed ortholog is 100%.

Group of orthologs #46. Best score 369 bits
Score difference with first non-orthologous sequence - C.trachomatis:369 S.italica:369

O84591              	100.00%		K3XWW9              	100.00%
                    	       		K3Z681              	85.74%
                    	       		K3ZSW8              	42.97%
                    	       		K4A9C1              	13.48%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for K3XWW9 as seed ortholog is 100%.

Group of orthologs #47. Best score 366 bits
Score difference with first non-orthologous sequence - C.trachomatis:366 S.italica:366

O84310              	100.00%		K3YQW5              	100.00%
                    	       		K3XWD0              	72.15%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for K3YQW5 as seed ortholog is 100%.

Group of orthologs #48. Best score 365 bits
Score difference with first non-orthologous sequence - C.trachomatis:365 S.italica:365

O84865              	100.00%		K3ZRY2              	100.00%
Bootstrap support for O84865 as seed ortholog is 100%.
Bootstrap support for K3ZRY2 as seed ortholog is 100%.

Group of orthologs #49. Best score 361 bits
Score difference with first non-orthologous sequence - C.trachomatis:361 S.italica:63

P0CE13              	100.00%		K3YIG5              	100.00%
                    	       		K3YS38              	75.88%
                    	       		K3YSW5              	44.37%
                    	       		K3Y178              	33.76%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for K3YIG5 as seed ortholog is 96%.

Group of orthologs #50. Best score 361 bits
Score difference with first non-orthologous sequence - C.trachomatis:361 S.italica:361

O84829              	100.00%		K3ZV34              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for K3ZV34 as seed ortholog is 100%.

Group of orthologs #51. Best score 360 bits
Score difference with first non-orthologous sequence - C.trachomatis:360 S.italica:41

O84101              	100.00%		K3YS88              	100.00%
Bootstrap support for O84101 as seed ortholog is 100%.
Bootstrap support for K3YS88 as seed ortholog is 10%.
Alternative seed ortholog is K3ZS44 (41 bits away from this cluster)

Group of orthologs #52. Best score 358 bits
Score difference with first non-orthologous sequence - C.trachomatis:358 S.italica:191

O84006              	100.00%		K3Y6D1              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for K3Y6D1 as seed ortholog is 99%.

Group of orthologs #53. Best score 356 bits
Score difference with first non-orthologous sequence - C.trachomatis:356 S.italica:356

O84711              	100.00%		K3YQR7              	100.00%
                    	       		K3YQR2              	29.33%
                    	       		K3XFN5              	23.38%
                    	       		K3Z5J5              	11.80%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for K3YQR7 as seed ortholog is 100%.

Group of orthologs #54. Best score 348 bits
Score difference with first non-orthologous sequence - C.trachomatis:348 S.italica:348

O84753              	100.00%		K3ZHH3              	100.00%
Bootstrap support for O84753 as seed ortholog is 100%.
Bootstrap support for K3ZHH3 as seed ortholog is 100%.

Group of orthologs #55. Best score 347 bits
Score difference with first non-orthologous sequence - C.trachomatis:347 S.italica:262

P0CD78              	100.00%		K3XXC5              	100.00%
                    	       		K3YT10              	84.81%
                    	       		K3Z5U9              	69.39%
                    	       		K3XH82              	66.82%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for K3XXC5 as seed ortholog is 100%.

Group of orthologs #56. Best score 347 bits
Score difference with first non-orthologous sequence - C.trachomatis:347 S.italica:105

O84094              	100.00%		K4AA89              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for K4AA89 as seed ortholog is 99%.

Group of orthologs #57. Best score 340 bits
Score difference with first non-orthologous sequence - C.trachomatis:340 S.italica:340

O84007              	100.00%		K3ZHY7              	100.00%
Bootstrap support for O84007 as seed ortholog is 100%.
Bootstrap support for K3ZHY7 as seed ortholog is 100%.

Group of orthologs #58. Best score 334 bits
Score difference with first non-orthologous sequence - C.trachomatis:334 S.italica:12

P0CD80              	100.00%		K4AAG3              	100.00%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for K4AAG3 as seed ortholog is 64%.
Alternative seed ortholog is K3XI24 (12 bits away from this cluster)

Group of orthologs #59. Best score 328 bits
Score difference with first non-orthologous sequence - C.trachomatis:328 S.italica:257

O84786              	100.00%		K4A7J3              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for K4A7J3 as seed ortholog is 100%.

Group of orthologs #60. Best score 326 bits
Score difference with first non-orthologous sequence - C.trachomatis:326 S.italica:46

O84248              	100.00%		K3YH48              	100.00%
                    	       		K3ZUD1              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for K3YH48 as seed ortholog is 93%.
Bootstrap support for K3ZUD1 as seed ortholog is 93%.

Group of orthologs #61. Best score 321 bits
Score difference with first non-orthologous sequence - C.trachomatis:321 S.italica:321

O84698              	100.00%		K3YR75              	100.00%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for K3YR75 as seed ortholog is 100%.

Group of orthologs #62. Best score 319 bits
Score difference with first non-orthologous sequence - C.trachomatis:319 S.italica:69

O84561              	100.00%		K3Y6S4              	100.00%
                    	       		K3XID1              	65.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for K3Y6S4 as seed ortholog is 87%.

Group of orthologs #63. Best score 316 bits
Score difference with first non-orthologous sequence - C.trachomatis:316 S.italica:187

O84649              	100.00%		K3Y2H4              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for K3Y2H4 as seed ortholog is 99%.

Group of orthologs #64. Best score 305 bits
Score difference with first non-orthologous sequence - C.trachomatis:305 S.italica:305

O84823              	100.00%		K3Y5Q1              	100.00%
                    	       		K3ZHL4              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for K3Y5Q1 as seed ortholog is 100%.
Bootstrap support for K3ZHL4 as seed ortholog is 100%.

Group of orthologs #65. Best score 301 bits
Score difference with first non-orthologous sequence - C.trachomatis:301 S.italica:207

O84395              	100.00%		K3ZT32              	100.00%
                    	       		K4A9M2              	92.39%
                    	       		K4AA65              	42.63%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for K3ZT32 as seed ortholog is 100%.

Group of orthologs #66. Best score 300 bits
Score difference with first non-orthologous sequence - C.trachomatis:300 S.italica:96

O84028              	100.00%		K3Y6A9              	100.00%
                    	       		K3Y6D7              	60.89%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for K3Y6A9 as seed ortholog is 99%.

Group of orthologs #67. Best score 299 bits
Score difference with first non-orthologous sequence - C.trachomatis:299 S.italica:25

O84316              	100.00%		K3Z2X1              	100.00%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for K3Z2X1 as seed ortholog is 50%.
Alternative seed ortholog is K3YFU7 (25 bits away from this cluster)

Group of orthologs #68. Best score 297 bits
Score difference with first non-orthologous sequence - C.trachomatis:297 S.italica:297

O84065              	100.00%		K4A909              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for K4A909 as seed ortholog is 100%.

Group of orthologs #69. Best score 295 bits
Score difference with first non-orthologous sequence - C.trachomatis:295 S.italica:295

O84787              	100.00%		K3ZRY0              	100.00%
                    	       		K3Z542              	35.12%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for K3ZRY0 as seed ortholog is 100%.

Group of orthologs #70. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 S.italica:239

O84496              	100.00%		K3YH56              	100.00%
                    	       		K3ZSG5              	77.10%
                    	       		K4A7B2              	31.03%
                    	       		K3Z5F3              	22.09%
                    	       		K3ZU08              	19.92%
                    	       		K3XGL9              	19.38%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for K3YH56 as seed ortholog is 100%.

Group of orthologs #71. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 S.italica:290

O84188              	100.00%		K4A771              	100.00%
                    	       		K3Y627              	57.94%
                    	       		K4A732              	27.62%
                    	       		K3YRN6              	18.69%
                    	       		K3Y6P7              	17.86%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for K4A771 as seed ortholog is 100%.

Group of orthologs #72. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 S.italica:173

O84058              	100.00%		K3Y7B0              	100.00%
                    	       		K3YSH1              	71.01%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for K3Y7B0 as seed ortholog is 100%.

Group of orthologs #73. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 S.italica:95

O84035              	100.00%		K4A5Z4              	100.00%
                    	       		K3YPZ4              	86.72%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for K4A5Z4 as seed ortholog is 96%.

Group of orthologs #74. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 S.italica:290

O84300              	100.00%		K3XVS0              	100.00%
Bootstrap support for O84300 as seed ortholog is 100%.
Bootstrap support for K3XVS0 as seed ortholog is 100%.

Group of orthologs #75. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 S.italica:290

O84451              	100.00%		K3YR82              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for K3YR82 as seed ortholog is 100%.

Group of orthologs #76. Best score 289 bits
Score difference with first non-orthologous sequence - C.trachomatis:289 S.italica:13

P0CE21              	100.00%		K3Z5G6              	100.00%
                    	       		K3XGQ8              	66.85%
                    	       		K4AJN9              	65.03%
                    	       		K3ZI04              	10.63%
                    	       		K3Y5R7              	9.37%
                    	       		K3ZI06              	6.57%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for K3Z5G6 as seed ortholog is 64%.
Alternative seed ortholog is K3XFX7 (13 bits away from this cluster)

Group of orthologs #77. Best score 287 bits
Score difference with first non-orthologous sequence - C.trachomatis:287 S.italica:49

O84381              	100.00%		K3YHB4              	100.00%
                    	       		K3ZT87              	55.19%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for K3YHB4 as seed ortholog is 94%.

Group of orthologs #78. Best score 285 bits
Score difference with first non-orthologous sequence - C.trachomatis:285 S.italica:94

O84383              	100.00%		K3ZHX7              	100.00%
Bootstrap support for O84383 as seed ortholog is 100%.
Bootstrap support for K3ZHX7 as seed ortholog is 99%.

Group of orthologs #79. Best score 282 bits
Score difference with first non-orthologous sequence - C.trachomatis:282 S.italica:11

O84026              	100.00%		K3Z846              	100.00%
Bootstrap support for O84026 as seed ortholog is 100%.
Bootstrap support for K3Z846 as seed ortholog is 56%.
Alternative seed ortholog is K3ZNU4 (11 bits away from this cluster)

Group of orthologs #80. Best score 281 bits
Score difference with first non-orthologous sequence - C.trachomatis:281 S.italica:57

O84345              	100.00%		K3YHL2              	100.00%
                    	       		K3YRW9              	20.06%
                    	       		K4A953              	5.66%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for K3YHL2 as seed ortholog is 92%.

Group of orthologs #81. Best score 281 bits
Score difference with first non-orthologous sequence - C.trachomatis:281 S.italica:281

O84360              	100.00%		K3XEK9              	100.00%
Bootstrap support for O84360 as seed ortholog is 100%.
Bootstrap support for K3XEK9 as seed ortholog is 100%.

Group of orthologs #82. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 S.italica:129

P0CD72              	100.00%		K4A7S6              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for K4A7S6 as seed ortholog is 99%.

Group of orthologs #83. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 S.italica:8

O84465              	100.00%		K4A9H9              	100.00%
Bootstrap support for O84465 as seed ortholog is 100%.
Bootstrap support for K4A9H9 as seed ortholog is 56%.
Alternative seed ortholog is K3ZTA0 (8 bits away from this cluster)

Group of orthologs #84. Best score 276 bits
Score difference with first non-orthologous sequence - C.trachomatis:276 S.italica:152

O84089              	100.00%		K4A5F6              	100.00%
                    	       		K3ZQF9              	94.57%
Bootstrap support for O84089 as seed ortholog is 100%.
Bootstrap support for K4A5F6 as seed ortholog is 99%.

Group of orthologs #85. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:275 S.italica:275

O84074              	100.00%		K3XHC8              	100.00%
Bootstrap support for O84074 as seed ortholog is 100%.
Bootstrap support for K3XHC8 as seed ortholog is 100%.

Group of orthologs #86. Best score 274 bits
Score difference with first non-orthologous sequence - C.trachomatis:274 S.italica:42

O84797              	100.00%		K3ZQ28              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for K3ZQ28 as seed ortholog is 73%.
Alternative seed ortholog is K3Z3J9 (42 bits away from this cluster)

Group of orthologs #87. Best score 272 bits
Score difference with first non-orthologous sequence - C.trachomatis:272 S.italica:151

O84212              	100.00%		K3Z5K2              	100.00%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for K3Z5K2 as seed ortholog is 99%.

Group of orthologs #88. Best score 271 bits
Score difference with first non-orthologous sequence - C.trachomatis:271 S.italica:200

O84828              	100.00%		K3YSS1              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for K3YSS1 as seed ortholog is 100%.

Group of orthologs #89. Best score 271 bits
Score difference with first non-orthologous sequence - C.trachomatis:271 S.italica:29

O84352              	100.00%		K3ZHJ0              	100.00%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for K3ZHJ0 as seed ortholog is 73%.
Alternative seed ortholog is K3YQC1 (29 bits away from this cluster)

Group of orthologs #90. Best score 270 bits
Score difference with first non-orthologous sequence - C.trachomatis:270 S.italica:270

O84638              	100.00%		K3XX34              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for K3XX34 as seed ortholog is 100%.

Group of orthologs #91. Best score 269 bits
Score difference with first non-orthologous sequence - C.trachomatis:269 S.italica:269

O84693              	100.00%		K3YS94              	100.00%
Bootstrap support for O84693 as seed ortholog is 100%.
Bootstrap support for K3YS94 as seed ortholog is 100%.

Group of orthologs #92. Best score 267 bits
Score difference with first non-orthologous sequence - C.trachomatis:267 S.italica:267

O84373              	100.00%		K4AA31              	100.00%
Bootstrap support for O84373 as seed ortholog is 100%.
Bootstrap support for K4AA31 as seed ortholog is 100%.

Group of orthologs #93. Best score 262 bits
Score difference with first non-orthologous sequence - C.trachomatis:262 S.italica:84

O84734              	100.00%		K3ZI33              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for K3ZI33 as seed ortholog is 97%.

Group of orthologs #94. Best score 257 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 S.italica:49

O84249              	100.00%		K3YRF6              	100.00%
                    	       		K4A9W0              	9.17%
Bootstrap support for O84249 as seed ortholog is 98%.
Bootstrap support for K3YRF6 as seed ortholog is 99%.

Group of orthologs #95. Best score 251 bits
Score difference with first non-orthologous sequence - C.trachomatis:251 S.italica:251

O84704              	100.00%		K3YH22              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for K3YH22 as seed ortholog is 100%.

Group of orthologs #96. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:248 S.italica:248

O84439              	100.00%		K3Z566              	100.00%
                    	       		K3ZHT0              	73.54%
                    	       		K3XGJ1              	73.18%
                    	       		K3XFW2              	43.98%
                    	       		K4A8N1              	34.33%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for K3Z566 as seed ortholog is 100%.

Group of orthologs #97. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:248 S.italica:181

O84309              	100.00%		K3XWK8              	100.00%
                    	       		K3YRZ4              	100.00%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for K3XWK8 as seed ortholog is 99%.
Bootstrap support for K3YRZ4 as seed ortholog is 100%.

Group of orthologs #98. Best score 247 bits
Score difference with first non-orthologous sequence - C.trachomatis:247 S.italica:247

O84049              	100.00%		K3YR24              	100.00%
                    	       		K3YRI5              	64.29%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for K3YR24 as seed ortholog is 100%.

Group of orthologs #99. Best score 243 bits
Score difference with first non-orthologous sequence - C.trachomatis:243 S.italica:78

O84804              	100.00%		K3Z3N0              	100.00%
Bootstrap support for O84804 as seed ortholog is 100%.
Bootstrap support for K3Z3N0 as seed ortholog is 94%.

Group of orthologs #100. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 S.italica:189

O84727              	100.00%		K3XY50              	100.00%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for K3XY50 as seed ortholog is 100%.

Group of orthologs #101. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:237 S.italica:237

O84642              	100.00%		K3XHJ0              	100.00%
                    	       		K3YSB2              	31.35%
                    	       		K3XX32              	25.85%
                    	       		K3YSK5              	23.33%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for K3XHJ0 as seed ortholog is 100%.

Group of orthologs #102. Best score 232 bits
Score difference with first non-orthologous sequence - C.trachomatis:232 S.italica:232

O84562              	100.00%		K3Y7Y6              	100.00%
                    	       		K3XJ61              	24.68%
                    	       		K3Z790              	24.68%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for K3Y7Y6 as seed ortholog is 100%.

Group of orthologs #103. Best score 229 bits
Score difference with first non-orthologous sequence - C.trachomatis:229 S.italica:229

O84081              	100.00%		K3YTG4              	100.00%
                    	       		K3Z8H6              	35.44%
                    	       		K3ZU46              	34.01%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for K3YTG4 as seed ortholog is 100%.

Group of orthologs #104. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 S.italica:228

O84596              	100.00%		K4A765              	100.00%
                    	       		K3YNH9              	94.99%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for K4A765 as seed ortholog is 100%.

Group of orthologs #105. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 S.italica:225

O84812              	100.00%		K3XE64              	100.00%
                    	       		K3ZQD3              	58.40%
                    	       		K4A590              	16.05%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for K3XE64 as seed ortholog is 100%.

Group of orthologs #106. Best score 224 bits
Score difference with first non-orthologous sequence - C.trachomatis:224 S.italica:224

O84813              	100.00%		K4A9W8              	100.00%
Bootstrap support for O84813 as seed ortholog is 100%.
Bootstrap support for K4A9W8 as seed ortholog is 100%.

Group of orthologs #107. Best score 222 bits
Score difference with first non-orthologous sequence - C.trachomatis:222 S.italica:222

O84613              	100.00%		K3Z887              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for K3Z887 as seed ortholog is 100%.

Group of orthologs #108. Best score 219 bits
Score difference with first non-orthologous sequence - C.trachomatis:219 S.italica:167

O84242              	100.00%		K3Y7S2              	100.00%
Bootstrap support for O84242 as seed ortholog is 100%.
Bootstrap support for K3Y7S2 as seed ortholog is 99%.

Group of orthologs #109. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 S.italica:29

O84266              	100.00%		K3XF65              	100.00%
                    	       		K4A6V9              	9.30%
                    	       		K3XFQ2              	6.11%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for K3XF65 as seed ortholog is 74%.
Alternative seed ortholog is K4A6B0 (29 bits away from this cluster)

Group of orthologs #110. Best score 217 bits
Score difference with first non-orthologous sequence - C.trachomatis:217 S.italica:65

O84423              	100.00%		K3Z584              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for K3Z584 as seed ortholog is 94%.

Group of orthologs #111. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 S.italica:21

O84712              	100.00%		K3Y916              	100.00%
                    	       		K3YT73              	52.34%
Bootstrap support for O84712 as seed ortholog is 99%.
Bootstrap support for K3Y916 as seed ortholog is 86%.

Group of orthologs #112. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 S.italica:83

O84296              	100.00%		K3Z9A6              	100.00%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for K3Z9A6 as seed ortholog is 99%.

Group of orthologs #113. Best score 210 bits
Score difference with first non-orthologous sequence - C.trachomatis:210 S.italica:121

O84196              	100.00%		K3ZTM9              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for K3ZTM9 as seed ortholog is 99%.

Group of orthologs #114. Best score 209 bits
Score difference with first non-orthologous sequence - C.trachomatis:209 S.italica:209

O84404              	100.00%		K3YTU5              	100.00%
Bootstrap support for O84404 as seed ortholog is 100%.
Bootstrap support for K3YTU5 as seed ortholog is 100%.

Group of orthologs #115. Best score 208 bits
Score difference with first non-orthologous sequence - C.trachomatis:208 S.italica:71

P38004              	100.00%		K3YYP0              	100.00%
                    	       		K3XYD1              	90.60%
                    	       		K3YIQ0              	90.60%
                    	       		K3ZCI9              	53.69%
                    	       		K3YJV2              	38.26%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for K3YYP0 as seed ortholog is 99%.

Group of orthologs #116. Best score 208 bits
Score difference with first non-orthologous sequence - C.trachomatis:208 S.italica:208

O84859              	100.00%		K4AB25              	100.00%
                    	       		K3Z064              	12.42%
                    	       		K3YIU3              	9.48%
                    	       		K3ZUQ0              	7.03%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for K4AB25 as seed ortholog is 100%.

Group of orthologs #117. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 S.italica:88

O84632              	100.00%		K4AA48              	100.00%
Bootstrap support for O84632 as seed ortholog is 100%.
Bootstrap support for K4AA48 as seed ortholog is 97%.

Group of orthologs #118. Best score 206 bits
Score difference with first non-orthologous sequence - C.trachomatis:206 S.italica:206

O84289              	100.00%		K4A947              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for K4A947 as seed ortholog is 100%.

Group of orthologs #119. Best score 205 bits
Score difference with first non-orthologous sequence - C.trachomatis:122 S.italica:205

P0CD74              	100.00%		K3Z8I0              	100.00%
Bootstrap support for P0CD74 as seed ortholog is 99%.
Bootstrap support for K3Z8I0 as seed ortholog is 100%.

Group of orthologs #120. Best score 201 bits
Score difference with first non-orthologous sequence - C.trachomatis:201 S.italica:201

P0CD75              	100.00%		K3Z8E4              	100.00%
Bootstrap support for P0CD75 as seed ortholog is 100%.
Bootstrap support for K3Z8E4 as seed ortholog is 100%.

Group of orthologs #121. Best score 200 bits
Score difference with first non-orthologous sequence - C.trachomatis:200 S.italica:76

O84456              	100.00%		K3XKP7              	100.00%
                    	       		K4A3E3              	32.60%
                    	       		K3ZVN0              	31.78%
                    	       		K3YBX6              	24.93%
                    	       		K3YE82              	22.19%
                    	       		K3Z2Y7              	22.19%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for K3XKP7 as seed ortholog is 99%.

Group of orthologs #122. Best score 196 bits
Score difference with first non-orthologous sequence - C.trachomatis:196 S.italica:33

O84530              	100.00%		K3ZTB7              	100.00%
                    	       		K3XX00              	85.80%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for K3ZTB7 as seed ortholog is 79%.

Group of orthologs #123. Best score 194 bits
Score difference with first non-orthologous sequence - C.trachomatis:194 S.italica:149

O84320              	100.00%		K3Z7N8              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for K3Z7N8 as seed ortholog is 100%.

Group of orthologs #124. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 S.italica:65

O84247              	100.00%		K4AAB0              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for K4AAB0 as seed ortholog is 97%.

Group of orthologs #125. Best score 190 bits
Score difference with first non-orthologous sequence - C.trachomatis:190 S.italica:86

O84825              	100.00%		K3ZSY6              	100.00%
O84824              	51.31%		
Bootstrap support for O84825 as seed ortholog is 100%.
Bootstrap support for K3ZSY6 as seed ortholog is 97%.

Group of orthologs #126. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 S.italica:188

O84332              	100.00%		K3XL78              	100.00%
                    	       		K3XL57              	72.64%
                    	       		K3ZVK5              	45.91%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for K3XL78 as seed ortholog is 100%.

Group of orthologs #127. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 S.italica:85

O84200              	100.00%		K3XHC4              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for K3XHC4 as seed ortholog is 98%.

Group of orthologs #128. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 S.italica:16

P18584              	100.00%		K3Z686              	100.00%
                    	       		K3Y7A6              	15.14%
Bootstrap support for P18584 as seed ortholog is 100%.
Bootstrap support for K3Z686 as seed ortholog is 66%.
Alternative seed ortholog is K3ZIK2 (16 bits away from this cluster)

Group of orthologs #129. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 S.italica:38

O84709              	100.00%		K3ZHU3              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for K3ZHU3 as seed ortholog is 77%.

Group of orthologs #130. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 S.italica:183

O84271              	100.00%		K4A668              	100.00%
Bootstrap support for O84271 as seed ortholog is 100%.
Bootstrap support for K4A668 as seed ortholog is 100%.

Group of orthologs #131. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 S.italica:46

P18333              	100.00%		K4A7Y8              	100.00%
                    	       		K4A8A6              	5.10%
Bootstrap support for P18333 as seed ortholog is 100%.
Bootstrap support for K4A7Y8 as seed ortholog is 91%.

Group of orthologs #132. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 S.italica:114

O84109              	100.00%		K3Z600              	100.00%
Bootstrap support for O84109 as seed ortholog is 100%.
Bootstrap support for K3Z600 as seed ortholog is 99%.

Group of orthologs #133. Best score 179 bits
Score difference with first non-orthologous sequence - C.trachomatis:179 S.italica:30

P28539              	100.00%		K3YMY1              	100.00%
Bootstrap support for P28539 as seed ortholog is 100%.
Bootstrap support for K3YMY1 as seed ortholog is 77%.

Group of orthologs #134. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 S.italica:175

O84619              	100.00%		K3XGF0              	100.00%
                    	       		K3ZID4              	82.38%
                    	       		K3ZSW5              	64.20%
Bootstrap support for O84619 as seed ortholog is 100%.
Bootstrap support for K3XGF0 as seed ortholog is 100%.

Group of orthologs #135. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 S.italica:173

O84827              	100.00%		K3XJB2              	100.00%
Bootstrap support for O84827 as seed ortholog is 100%.
Bootstrap support for K3XJB2 as seed ortholog is 100%.

Group of orthologs #136. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 S.italica:85

O84665              	100.00%		K3Y0V8              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for K3Y0V8 as seed ortholog is 97%.

Group of orthologs #137. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 S.italica:173

O84728              	100.00%		K4AAH9              	100.00%
Bootstrap support for O84728 as seed ortholog is 100%.
Bootstrap support for K4AAH9 as seed ortholog is 100%.

Group of orthologs #138. Best score 169 bits
Score difference with first non-orthologous sequence - C.trachomatis:169 S.italica:38

O84676              	100.00%		K3XG76              	100.00%
O84722              	11.70%		K3XFL3              	90.38%
                    	       		K3Z538              	90.27%
                    	       		K3Z2T6              	34.96%
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for K3XG76 as seed ortholog is 84%.

Group of orthologs #139. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:168 S.italica:168

O84535              	100.00%		K3XJA8              	100.00%
Bootstrap support for O84535 as seed ortholog is 100%.
Bootstrap support for K3XJA8 as seed ortholog is 100%.

Group of orthologs #140. Best score 163 bits
Score difference with first non-orthologous sequence - C.trachomatis:163 S.italica:91

O84720              	100.00%		K3YHB3              	100.00%
                    	       		K3Y8V8              	51.13%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for K3YHB3 as seed ortholog is 98%.

Group of orthologs #141. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 S.italica:48

O84321              	100.00%		K4AF01              	100.00%
                    	       		K3YJP2              	91.89%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for K4AF01 as seed ortholog is 98%.

Group of orthologs #142. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 S.italica:105

O84469              	100.00%		K3YYB1              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for K3YYB1 as seed ortholog is 99%.

Group of orthologs #143. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 S.italica:30

O84771              	100.00%		K3Z677              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for K3Z677 as seed ortholog is 78%.

Group of orthologs #144. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 S.italica:160

O84685              	100.00%		K3XY28              	100.00%
                    	       		K3XT57              	7.21%
Bootstrap support for O84685 as seed ortholog is 100%.
Bootstrap support for K3XY28 as seed ortholog is 100%.

Group of orthologs #145. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 S.italica:160

O84055              	100.00%		K3ZFD3              	100.00%
Bootstrap support for O84055 as seed ortholog is 95%.
Bootstrap support for K3ZFD3 as seed ortholog is 100%.

Group of orthologs #146. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 S.italica:160

O84241              	100.00%		K4AAY6              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for K4AAY6 as seed ortholog is 100%.

Group of orthologs #147. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 S.italica:21

O84735              	100.00%		K4AB41              	100.00%
Bootstrap support for O84735 as seed ortholog is 100%.
Bootstrap support for K4AB41 as seed ortholog is 72%.
Alternative seed ortholog is K3YQU9 (21 bits away from this cluster)

Group of orthologs #148. Best score 159 bits
Score difference with first non-orthologous sequence - C.trachomatis:159 S.italica:159

O84374              	100.00%		K3ZTD5              	100.00%
Bootstrap support for O84374 as seed ortholog is 100%.
Bootstrap support for K3ZTD5 as seed ortholog is 100%.

Group of orthologs #149. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 S.italica:158

O84538              	100.00%		K3Y8M3              	100.00%
                    	       		K4ACI5              	84.36%
Bootstrap support for O84538 as seed ortholog is 100%.
Bootstrap support for K3Y8M3 as seed ortholog is 100%.

Group of orthologs #150. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 S.italica:158

O84274              	100.00%		K3Z080              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for K3Z080 as seed ortholog is 100%.

Group of orthologs #151. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 S.italica:79

O84719              	100.00%		K3ZTI6              	100.00%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for K3ZTI6 as seed ortholog is 98%.

Group of orthologs #152. Best score 156 bits
Score difference with first non-orthologous sequence - C.trachomatis:156 S.italica:156

O84874              	100.00%		K3XVF4              	100.00%
                    	       		K3Y524              	47.57%
                    	       		K3YQ08              	46.88%
                    	       		K3Y1M1              	15.00%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for K3XVF4 as seed ortholog is 100%.

Group of orthologs #153. Best score 156 bits
Score difference with first non-orthologous sequence - C.trachomatis:156 S.italica:156

O84589              	100.00%		K3XII7              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for K3XII7 as seed ortholog is 100%.

Group of orthologs #154. Best score 156 bits
Score difference with first non-orthologous sequence - C.trachomatis:156 S.italica:156

P0CD76              	100.00%		K3ZVT8              	100.00%
Bootstrap support for P0CD76 as seed ortholog is 100%.
Bootstrap support for K3ZVT8 as seed ortholog is 100%.

Group of orthologs #155. Best score 155 bits
Score difference with first non-orthologous sequence - C.trachomatis:155 S.italica:155

O84260              	100.00%		K3XWV3              	100.00%
                    	       		K3ZTN8              	52.39%
Bootstrap support for O84260 as seed ortholog is 100%.
Bootstrap support for K3XWV3 as seed ortholog is 100%.

Group of orthologs #156. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 S.italica:80

P0CE01              	100.00%		K4AER4              	100.00%
Bootstrap support for P0CE01 as seed ortholog is 100%.
Bootstrap support for K4AER4 as seed ortholog is 99%.

Group of orthologs #157. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 S.italica:153

O84123              	100.00%		K4ADN7              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for K4ADN7 as seed ortholog is 100%.

Group of orthologs #158. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 S.italica:103

P66370              	100.00%		K3Z2L9              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for K3Z2L9 as seed ortholog is 100%.

Group of orthologs #159. Best score 149 bits
Score difference with first non-orthologous sequence - C.trachomatis:149 S.italica:149

O84507              	100.00%		K3YJ32              	100.00%
Bootstrap support for O84507 as seed ortholog is 100%.
Bootstrap support for K3YJ32 as seed ortholog is 100%.

Group of orthologs #160. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 S.italica:148

O84533              	100.00%		K3XK52              	100.00%
Bootstrap support for O84533 as seed ortholog is 100%.
Bootstrap support for K3XK52 as seed ortholog is 100%.

Group of orthologs #161. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 S.italica:148

O84468              	100.00%		K3XKI6              	100.00%
Bootstrap support for O84468 as seed ortholog is 100%.
Bootstrap support for K3XKI6 as seed ortholog is 100%.

Group of orthologs #162. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 S.italica:145

O84536              	100.00%		K3XJQ9              	100.00%
Bootstrap support for O84536 as seed ortholog is 100%.
Bootstrap support for K3XJQ9 as seed ortholog is 100%.

Group of orthologs #163. Best score 144 bits
Score difference with first non-orthologous sequence - C.trachomatis:144 S.italica:144

O84835              	100.00%		K3Y381              	100.00%
                    	       		K3Y9P2              	61.55%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for K3Y381 as seed ortholog is 100%.

Group of orthologs #164. Best score 144 bits
Score difference with first non-orthologous sequence - C.trachomatis:144 S.italica:144

O84463              	100.00%		K3ZC79              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for K3ZC79 as seed ortholog is 100%.

Group of orthologs #165. Best score 142 bits
Score difference with first non-orthologous sequence - C.trachomatis:142 S.italica:142

O84492              	100.00%		K3XWP1              	100.00%
                    	       		K3YQB9              	36.40%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for K3XWP1 as seed ortholog is 100%.

Group of orthologs #166. Best score 141 bits
Score difference with first non-orthologous sequence - C.trachomatis:141 S.italica:141

P0CD88              	100.00%		K4ADJ4              	100.00%
Bootstrap support for P0CD88 as seed ortholog is 100%.
Bootstrap support for K4ADJ4 as seed ortholog is 100%.

Group of orthologs #167. Best score 139 bits
Score difference with first non-orthologous sequence - C.trachomatis:35 S.italica:60

O84757              	100.00%		K3ZJS3              	100.00%
                    	       		K3Y9V9              	98.44%
Bootstrap support for O84757 as seed ortholog is 92%.
Bootstrap support for K3ZJS3 as seed ortholog is 99%.

Group of orthologs #168. Best score 137 bits
Score difference with first non-orthologous sequence - C.trachomatis:137 S.italica:90

O84315              	100.00%		K3YI14              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for K3YI14 as seed ortholog is 99%.

Group of orthologs #169. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 S.italica:136

O84686              	100.00%		K3YI62              	100.00%
                    	       		K3XR06              	65.03%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for K3YI62 as seed ortholog is 100%.

Group of orthologs #170. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 S.italica:32

O84684              	100.00%		K3YJ89              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for K3YJ89 as seed ortholog is 92%.

Group of orthologs #171. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 S.italica:135

O84752              	100.00%		K3XIG8              	100.00%
                    	       		K4AAX2              	38.29%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for K3XIG8 as seed ortholog is 100%.

Group of orthologs #172. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 S.italica:23

O84130              	100.00%		K3Z980              	100.00%
                    	       		K3ZJJ4              	94.27%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for K3Z980 as seed ortholog is 83%.

Group of orthologs #173. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 S.italica:132

O84864              	100.00%		K4A6T3              	100.00%
                    	       		K4A6S3              	49.65%
                    	       		K3XFD8              	49.48%
                    	       		K3Y5Q8              	49.39%
                    	       		K3YGL4              	49.05%
                    	       		K3XVN9              	48.96%
                    	       		K4A6U1              	47.31%
                    	       		K4A6T2              	39.15%
                    	       		K4A6T4              	36.63%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for K4A6T3 as seed ortholog is 100%.

Group of orthologs #174. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 S.italica:132

O84215              	100.00%		K3Y9J6              	100.00%
                    	       		K3Z8M9              	78.76%
                    	       		K3ZVZ9              	24.19%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for K3Y9J6 as seed ortholog is 100%.

Group of orthologs #175. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 S.italica:68

P0A4C8              	100.00%		K4AJN6              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for K4AJN6 as seed ortholog is 99%.

Group of orthologs #176. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 S.italica:127

O84367              	100.00%		K4A7T3              	100.00%
                    	       		K3ZRY4              	72.15%
                    	       		K3XG74              	64.44%
Bootstrap support for O84367 as seed ortholog is 100%.
Bootstrap support for K4A7T3 as seed ortholog is 100%.

Group of orthologs #177. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 S.italica:23

O84127              	100.00%		K3XLM1              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for K3XLM1 as seed ortholog is 86%.

Group of orthologs #178. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 S.italica:20

P0CD81              	100.00%		K3Z2U0              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for K3Z2U0 as seed ortholog is 84%.

Group of orthologs #179. Best score 122 bits
Score difference with first non-orthologous sequence - C.trachomatis:122 S.italica:45

O84781              	100.00%		K3YRC3              	100.00%
                    	       		K3XW64              	82.74%
                    	       		K3YGX1              	61.85%
                    	       		K3YH13              	58.52%
                    	       		K3YR73              	56.03%
                    	       		K3Y5U5              	27.13%
                    	       		K4A7N6              	26.92%
                    	       		K4ALU4              	26.72%
                    	       		K4A7T8              	25.68%
                    	       		K4A825              	24.95%
                    	       		K4A818              	24.43%
                    	       		K3Z555              	20.79%
                    	       		K4A7L2              	20.69%
                    	       		K3XG70              	20.69%
                    	       		K4ALV4              	20.48%
                    	       		K3Y0W4              	16.74%
                    	       		K4AJR1              	10.50%
                    	       		K3Z5B8              	6.24%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for K3YRC3 as seed ortholog is 90%.

Group of orthologs #180. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 S.italica:121

O84371              	100.00%		K3XWI8              	100.00%
Bootstrap support for O84371 as seed ortholog is 92%.
Bootstrap support for K3XWI8 as seed ortholog is 100%.

Group of orthologs #181. Best score 120 bits
Score difference with first non-orthologous sequence - C.trachomatis:120 S.italica:33

O84508              	100.00%		K4AIL8              	100.00%
                    	       		K3Y1L9              	69.89%
                    	       		K3Z9G1              	44.09%
                    	       		K3YVK1              	42.47%
                    	       		K3Z982              	39.25%
                    	       		K3ZZV7              	36.02%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for K4AIL8 as seed ortholog is 94%.

Group of orthologs #182. Best score 120 bits
Score difference with first non-orthologous sequence - C.trachomatis:120 S.italica:120

O84633              	100.00%		K3ZUK4              	100.00%
                    	       		K3XQ22              	34.24%
                    	       		K3YYS5              	7.67%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for K3ZUK4 as seed ortholog is 100%.

Group of orthologs #183. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 S.italica:119

O84547              	100.00%		K3ZZV4              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for K3ZZV4 as seed ortholog is 100%.

Group of orthologs #184. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 S.italica:67

P0CE02              	100.00%		K4AFM8              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for K4AFM8 as seed ortholog is 99%.

Group of orthologs #185. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 S.italica:118

O84810              	100.00%		K3XIH5              	100.00%
Bootstrap support for O84810 as seed ortholog is 100%.
Bootstrap support for K3XIH5 as seed ortholog is 100%.

Group of orthologs #186. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 S.italica:32

O84358              	100.00%		K3ZUJ9              	100.00%
                    	       		K4A2G6              	53.61%
                    	       		K3YTK6              	24.74%
                    	       		K3YTG8              	23.71%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for K3ZUJ9 as seed ortholog is 88%.

Group of orthologs #187. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 S.italica:114

O84331              	100.00%		K3YUU7              	100.00%
                    	       		K3XYT1              	55.96%
Bootstrap support for O84331 as seed ortholog is 100%.
Bootstrap support for K3YUU7 as seed ortholog is 100%.

Group of orthologs #188. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 S.italica:111

O84448              	100.00%		K3XWD1              	100.00%
                    	       		K3XHK8              	12.85%
Bootstrap support for O84448 as seed ortholog is 100%.
Bootstrap support for K3XWD1 as seed ortholog is 100%.

Group of orthologs #189. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 S.italica:111

O84033              	100.00%		K4ADE4              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for K4ADE4 as seed ortholog is 100%.

Group of orthologs #190. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 S.italica:110

O84173              	100.00%		K4ACC5              	100.00%
                    	       		K4AC99              	79.78%
                    	       		K3ZV22              	50.75%
                    	       		K4ADQ5              	48.69%
Bootstrap support for O84173 as seed ortholog is 100%.
Bootstrap support for K4ACC5 as seed ortholog is 100%.

Group of orthologs #191. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 S.italica:110

O84375              	100.00%		K3Z583              	100.00%
                    	       		K3Z5E5              	70.51%
                    	       		K3XGH5              	61.59%
Bootstrap support for O84375 as seed ortholog is 100%.
Bootstrap support for K3Z583 as seed ortholog is 100%.

Group of orthologs #192. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 S.italica:33

O84357              	100.00%		K3XKX2              	100.00%
Bootstrap support for O84357 as seed ortholog is 100%.
Bootstrap support for K3XKX2 as seed ortholog is 89%.

Group of orthologs #193. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 S.italica:109

O84737              	100.00%		K3Y9Z9              	100.00%
Bootstrap support for O84737 as seed ortholog is 100%.
Bootstrap support for K3Y9Z9 as seed ortholog is 100%.

Group of orthologs #194. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 S.italica:109

O84837              	100.00%		K3ZEQ2              	100.00%
Bootstrap support for O84837 as seed ortholog is 100%.
Bootstrap support for K3ZEQ2 as seed ortholog is 100%.

Group of orthologs #195. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 S.italica:49

O84548              	100.00%		K3Y6K7              	100.00%
                    	       		K3YH91              	62.97%
                    	       		K3YTF5              	54.04%
                    	       		K3YY64              	41.44%
                    	       		K3XWS9              	37.57%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for K3Y6K7 as seed ortholog is 86%.

Group of orthologs #196. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 S.italica:106

O84545              	100.00%		K3YJ98              	100.00%
Bootstrap support for O84545 as seed ortholog is 100%.
Bootstrap support for K3YJ98 as seed ortholog is 100%.

Group of orthologs #197. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 S.italica:43

O84442              	100.00%		K3YGH3              	100.00%
                    	       		K3ZR57              	73.79%
                    	       		K3Z4A4              	70.88%
                    	       		K3XFI3              	14.87%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for K3YGH3 as seed ortholog is 84%.

Group of orthologs #198. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 S.italica:104

P36431              	100.00%		K3Z5F7              	100.00%
                    	       		K3YLG6              	75.75%
                    	       		K3ZRV9              	30.05%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for K3Z5F7 as seed ortholog is 100%.

Group of orthologs #199. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 S.italica:27

O84318              	100.00%		K3XME8              	100.00%
                    	       		K3Z941              	65.50%
Bootstrap support for O84318 as seed ortholog is 100%.
Bootstrap support for K3XME8 as seed ortholog is 99%.

Group of orthologs #200. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 S.italica:24

P55137              	100.00%		K3Y573              	100.00%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for K3Y573 as seed ortholog is 68%.
Alternative seed ortholog is K3XI53 (24 bits away from this cluster)

Group of orthologs #201. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 S.italica:38

P36424              	100.00%		K3YU25              	100.00%
                    	       		K3Y985              	15.60%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for K3YU25 as seed ortholog is 96%.

Group of orthologs #202. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 S.italica:39

P0CE04              	100.00%		K4AFW9              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for K4AFW9 as seed ortholog is 93%.

Group of orthologs #203. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 S.italica:100

O84779              	100.00%		K3Y7K4              	100.00%
                    	       		K3Y8D1              	57.22%
                    	       		K3YS83              	22.28%
                    	       		K4A3G5              	7.29%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for K3Y7K4 as seed ortholog is 100%.

Group of orthologs #204. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 S.italica:30

O84806              	100.00%		K3XL61              	100.00%
                    	       		K3YMI5              	31.48%
                    	       		K4AMI4              	30.99%
                    	       		K3Z9Y9              	19.37%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for K3XL61 as seed ortholog is 90%.

Group of orthologs #205. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 S.italica:99

O84189              	100.00%		K3YIK4              	100.00%
                    	       		K3ZVC3              	62.52%
                    	       		K3ZVV2              	29.43%
                    	       		K4ADM1              	28.88%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for K3YIK4 as seed ortholog is 100%.

Group of orthologs #206. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 S.italica:99

O84578              	100.00%		K3Z6Q0              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for K3Z6Q0 as seed ortholog is 100%.

Group of orthologs #207. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 S.italica:39

O84128              	100.00%		K4AEU5              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for K4AEU5 as seed ortholog is 95%.

Group of orthologs #208. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 S.italica:40

O84777              	100.00%		K3Z8M8              	100.00%
                    	       		K3YVT4              	53.56%
                    	       		K3Z9F4              	52.93%
                    	       		K3Z9I6              	52.93%
                    	       		K3XLW6              	51.26%
                    	       		K4AFC5              	33.26%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for K3Z8M8 as seed ortholog is 90%.

Group of orthologs #209. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:26 S.italica:36

O84822              	100.00%		K3ZS46              	100.00%
                    	       		K3XX10              	20.95%
Bootstrap support for O84822 as seed ortholog is 71%.
Alternative seed ortholog is O84297 (26 bits away from this cluster)
Bootstrap support for K3ZS46 as seed ortholog is 72%.
Alternative seed ortholog is K3XG38 (36 bits away from this cluster)

Group of orthologs #210. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 S.italica:96

O84338              	100.00%		K3Y8J4              	100.00%
                    	       		K3YTJ9              	19.54%
                    	       		K3Y8K6              	17.96%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for K3Y8J4 as seed ortholog is 100%.

Group of orthologs #211. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 S.italica:27

O84650              	100.00%		K3XX49              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for K3XX49 as seed ortholog is 75%.

Group of orthologs #212. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 S.italica:95

O84366              	100.00%		K3XYC6              	100.00%
                    	       		K3Y816              	83.30%
                    	       		K3XXI9              	82.94%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for K3XYC6 as seed ortholog is 100%.

Group of orthologs #213. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 S.italica:95

O84867              	100.00%		K4A9J2              	100.00%
                    	       		K4AKD3              	56.04%
Bootstrap support for O84867 as seed ortholog is 100%.
Bootstrap support for K4A9J2 as seed ortholog is 100%.

Group of orthologs #214. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 S.italica:94

O84410              	100.00%		K3Z8C5              	100.00%
Bootstrap support for O84410 as seed ortholog is 100%.
Bootstrap support for K3Z8C5 as seed ortholog is 100%.

Group of orthologs #215. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:20 S.italica:31

O84695              	100.00%		K3ZNY1              	100.00%
O84205              	11.11%		
O84204              	10.89%		
O84696              	10.67%		
Bootstrap support for O84695 as seed ortholog is 73%.
Alternative seed ortholog is O84421 (20 bits away from this cluster)
Bootstrap support for K3ZNY1 as seed ortholog is 85%.

Group of orthologs #216. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:93 S.italica:93

O84294              	100.00%		K4AF06              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for K4AF06 as seed ortholog is 100%.

Group of orthologs #217. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 S.italica:91

O84842              	100.00%		K3XM58              	100.00%
                    	       		K3ZAT1              	46.75%
Bootstrap support for O84842 as seed ortholog is 100%.
Bootstrap support for K3XM58 as seed ortholog is 100%.

Group of orthologs #218. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 S.italica:91

O84843              	100.00%		K3YRV4              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for K3YRV4 as seed ortholog is 100%.

Group of orthologs #219. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 S.italica:21

O84544              	100.00%		K3ZY56              	100.00%
                    	       		K3ZAQ3              	24.83%
                    	       		K4AGJ6              	24.16%
                    	       		K3XMZ8              	12.75%
                    	       		K3ZAP3              	11.41%
                    	       		K4AGZ1              	8.05%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for K3ZY56 as seed ortholog is 86%.

Group of orthologs #220. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 S.italica:90

O84782              	100.00%		K3ZI79              	100.00%
                    	       		K3XH37              	89.11%
                    	       		K4A964              	6.85%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for K3ZI79 as seed ortholog is 100%.

Group of orthologs #221. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 S.italica:90

O84532              	100.00%		K3Z9T3              	100.00%
                    	       		K3ZJF2              	94.12%
Bootstrap support for O84532 as seed ortholog is 100%.
Bootstrap support for K3Z9T3 as seed ortholog is 100%.

Group of orthologs #222. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 S.italica:90

O84220              	100.00%		K3ZVB5              	100.00%
                    	       		K3XI68              	20.25%
Bootstrap support for O84220 as seed ortholog is 100%.
Bootstrap support for K3ZVB5 as seed ortholog is 100%.

Group of orthologs #223. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 S.italica:90

O84301              	100.00%		K3YTM9              	100.00%
Bootstrap support for O84301 as seed ortholog is 100%.
Bootstrap support for K3YTM9 as seed ortholog is 100%.

Group of orthologs #224. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 S.italica:17

O84435              	100.00%		K3ZJD1              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for K3ZJD1 as seed ortholog is 68%.
Alternative seed ortholog is K3Y9Z3 (17 bits away from this cluster)

Group of orthologs #225. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 S.italica:25

O84660              	100.00%		K3ZTM2              	100.00%
Bootstrap support for O84660 as seed ortholog is 100%.
Bootstrap support for K3ZTM2 as seed ortholog is 78%.

Group of orthologs #226. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 S.italica:14

O84608              	100.00%		K3ZWR9              	100.00%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for K3ZWR9 as seed ortholog is 65%.
Alternative seed ortholog is K3XZ93 (14 bits away from this cluster)

Group of orthologs #227. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:27 S.italica:89

O84258              	100.00%		K4A7D6              	100.00%
Bootstrap support for O84258 as seed ortholog is 76%.
Bootstrap support for K4A7D6 as seed ortholog is 100%.

Group of orthologs #228. Best score 88 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 S.italica:29

O84680              	100.00%		K3YS89              	100.00%
                    	       		K3XTU9              	61.12%
                    	       		K3Z627              	56.60%
                    	       		K3ZT91              	56.24%
                    	       		K3ZIG7              	54.58%
                    	       		K3Y7C5              	53.98%
                    	       		K3ZC92              	53.15%
                    	       		K4AMB1              	51.01%
                    	       		K3XHP8              	50.42%
                    	       		K3XHB7              	42.81%
                    	       		K3ZT97              	41.50%
                    	       		K3Y7D7              	41.02%
                    	       		K3XH14              	40.07%
                    	       		K3YHK4              	39.95%
                    	       		K4A9W9              	39.83%
                    	       		K4A9U0              	39.60%
                    	       		K3ZIC0              	39.12%
                    	       		K3XGM0              	38.41%
                    	       		K3ZTA1              	36.98%
                    	       		K3ZSY4              	36.86%
                    	       		K3XWV1              	34.48%
                    	       		K4APM9              	34.13%
                    	       		K3ZII3              	33.41%
                    	       		K3Z6Q6              	32.34%
                    	       		K3XHH5              	32.34%
                    	       		K3XHQ1              	31.87%
                    	       		K3ZTB6              	31.87%
                    	       		K3Z5X8              	31.39%
                    	       		K4AA92              	31.27%
                    	       		K3XWM9              	31.03%
                    	       		K3Z6C1              	28.89%
                    	       		K3ZIW8              	28.18%
                    	       		K3ZTH3              	25.92%
                    	       		K3Z6A5              	22.24%
                    	       		K3Z5L0              	18.55%
                    	       		K4A8R4              	17.12%
                    	       		K4ABQ2              	14.15%
                    	       		K4ABM6              	13.67%
                    	       		K4AAY4              	13.67%
                    	       		K3XJ92              	13.32%
                    	       		K3ZUY6              	13.32%
                    	       		K3Z7C8              	13.20%
                    	       		K3Y7A2              	12.96%
                    	       		K4ACC4              	12.96%
                    	       		K3Z738              	12.72%
                    	       		K3ZZJ1              	12.01%
                    	       		K3Z758              	11.41%
                    	       		K3YSX4              	10.58%
                    	       		K3XKL8              	10.11%
                    	       		K3XWG5              	9.75%
                    	       		K3XGT9              	9.16%
                    	       		K3Y7I9              	9.04%
                    	       		K3YRK5              	8.92%
                    	       		K3ZSS7              	8.80%
                    	       		K3YZK6              	8.56%
                    	       		K4AP56              	8.32%
                    	       		K3ZT84              	8.20%
                    	       		K3Z4Z7              	7.73%
                    	       		K3XGK4              	7.49%
                    	       		K4A8M2              	7.49%
                    	       		K3ZSF0              	7.25%
                    	       		K3Y6M3              	7.13%
                    	       		K3ZIB9              	6.90%
                    	       		K3YHP1              	6.90%
                    	       		K3ZS19              	6.30%
                    	       		K3Z547              	5.83%
                    	       		K3YUR6              	5.47%
                    	       		K4AIA5              	5.47%
                    	       		K4AIP3              	5.11%
                    	       		K3Z529              	5.11%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for K3YS89 as seed ortholog is 77%.

Group of orthologs #229. Best score 88 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 S.italica:88

O84390              	100.00%		K3XZK2              	100.00%
                    	       		K4AGL7              	42.42%
                    	       		K3XMN0              	39.02%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for K3XZK2 as seed ortholog is 100%.

Group of orthologs #230. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.italica:87

P0CD84              	100.00%		K3XMP9              	100.00%
                    	       		K4AF49              	5.98%
Bootstrap support for P0CD84 as seed ortholog is 100%.
Bootstrap support for K3XMP9 as seed ortholog is 100%.

Group of orthologs #231. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 S.italica:87

P0CE14              	100.00%		K3XI74              	100.00%
Bootstrap support for P0CE14 as seed ortholog is 100%.
Bootstrap support for K3XI74 as seed ortholog is 100%.

Group of orthologs #232. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 S.italica:86

O84595              	100.00%		K4A1R8              	100.00%
                    	       		K3YHV8              	33.51%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for K4A1R8 as seed ortholog is 100%.

Group of orthologs #233. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 S.italica:85

O84840              	100.00%		K3YUB3              	100.00%
Bootstrap support for O84840 as seed ortholog is 100%.
Bootstrap support for K3YUB3 as seed ortholog is 100%.

Group of orthologs #234. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 S.italica:84

O84391              	100.00%		K3YT93              	100.00%
                    	       		K3ZU54              	91.32%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for K3YT93 as seed ortholog is 100%.

Group of orthologs #235. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 S.italica:83

O84384              	100.00%		K3ZUC9              	100.00%
                    	       		K3Z7W4              	15.32%
                    	       		K3Y8K4              	10.21%
Bootstrap support for O84384 as seed ortholog is 100%.
Bootstrap support for K3ZUC9 as seed ortholog is 100%.

Group of orthologs #236. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 S.italica:82

O84778              	100.00%		K3Y7P4              	100.00%
                    	       		K4AAJ8              	80.93%
                    	       		K3XFE5              	7.47%
Bootstrap support for O84778 as seed ortholog is 100%.
Bootstrap support for K3Y7P4 as seed ortholog is 100%.

Group of orthologs #237. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 S.italica:34

P0CE06              	100.00%		K3Z2I0              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for K3Z2I0 as seed ortholog is 92%.

Group of orthologs #238. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 S.italica:77

P66123              	100.00%		K3YAL6              	100.00%
                    	       		K3YZD9              	71.62%
Bootstrap support for P66123 as seed ortholog is 100%.
Bootstrap support for K3YAL6 as seed ortholog is 100%.

Group of orthologs #239. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 S.italica:77

O84437              	100.00%		K3Z7E2              	100.00%
Bootstrap support for O84437 as seed ortholog is 100%.
Bootstrap support for K3Z7E2 as seed ortholog is 100%.

Group of orthologs #240. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 S.italica:77

P0CD79              	100.00%		K4AIY4              	100.00%
Bootstrap support for P0CD79 as seed ortholog is 100%.
Bootstrap support for K4AIY4 as seed ortholog is 100%.

Group of orthologs #241. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 S.italica:76

O84218              	100.00%		K3YHB5              	100.00%
                    	       		K3YRH0              	65.83%
                    	       		K3Z519              	43.78%
                    	       		K4A921              	37.66%
                    	       		K4A8V0              	35.59%
                    	       		K4A8V3              	32.42%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for K3YHB5 as seed ortholog is 100%.

Group of orthologs #242. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:20 S.italica:7

O84183              	100.00%		K3YEA5              	100.00%
                    	       		K3XLP4              	95.63%
                    	       		K3XSQ6              	67.76%
                    	       		K3XQ56              	47.27%
                    	       		K3XSZ2              	42.35%
Bootstrap support for O84183 as seed ortholog is 75%.
Bootstrap support for K3YEA5 as seed ortholog is 57%.
Alternative seed ortholog is K3Y808 (7 bits away from this cluster)

Group of orthologs #243. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:12 S.italica:76

O84430              	100.00%		K4AAE5              	100.00%
                    	       		K4A8I3              	52.24%
                    	       		K3Z5E7              	42.89%
Bootstrap support for O84430 as seed ortholog is 53%.
Alternative seed ortholog is O84259 (12 bits away from this cluster)
Bootstrap support for K4AAE5 as seed ortholog is 100%.

Group of orthologs #244. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 S.italica:76

O84766              	100.00%		K3XHX6              	100.00%
Bootstrap support for O84766 as seed ortholog is 100%.
Bootstrap support for K3XHX6 as seed ortholog is 100%.

Group of orthologs #245. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 S.italica:29

O84027              	100.00%		K3Z9C5              	100.00%
Bootstrap support for O84027 as seed ortholog is 100%.
Bootstrap support for K3Z9C5 as seed ortholog is 82%.

Group of orthologs #246. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 S.italica:75

P0CD85              	100.00%		K4AFJ7              	100.00%
Bootstrap support for P0CD85 as seed ortholog is 100%.
Bootstrap support for K4AFJ7 as seed ortholog is 100%.

Group of orthologs #247. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 S.italica:73

O84284              	100.00%		K3YWB1              	100.00%
                    	       		K3ZA97              	61.07%
                    	       		K3YMG1              	47.54%
                    	       		K3YAF8              	47.13%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for K3YWB1 as seed ortholog is 100%.

Group of orthologs #248. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 S.italica:3

O84599              	100.00%		K3Y8W7              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for K3Y8W7 as seed ortholog is 47%.
Alternative seed ortholog is K3ZV93 (3 bits away from this cluster)

Group of orthologs #249. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 S.italica:72

O84139              	100.00%		K4ADP5              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for K4ADP5 as seed ortholog is 100%.

Group of orthologs #250. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 S.italica:71

O84353              	100.00%		K3ZJU8              	100.00%
                    	       		K4AF44              	50.00%
                    	       		K4AEL5              	29.46%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for K3ZJU8 as seed ortholog is 100%.

Group of orthologs #251. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 S.italica:70

O84499              	100.00%		K3XQY9              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for K3XQY9 as seed ortholog is 100%.

Group of orthologs #252. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 S.italica:70

O84713              	100.00%		K3XWC5              	100.00%
Bootstrap support for O84713 as seed ortholog is 100%.
Bootstrap support for K3XWC5 as seed ortholog is 100%.

Group of orthologs #253. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.italica:8

P0CE03              	100.00%		K3YAJ9              	100.00%
                    	       		K3YWE6              	99.13%
                    	       		K3XZS1              	94.81%
                    	       		K3YWF2              	93.07%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for K3YAJ9 as seed ortholog is 56%.
Alternative seed ortholog is K3ZEH9 (8 bits away from this cluster)

Group of orthologs #254. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.italica:69

O84263              	100.00%		K3Y976              	100.00%
O84541              	8.60%		
Bootstrap support for O84263 as seed ortholog is 100%.
Bootstrap support for K3Y976 as seed ortholog is 100%.

Group of orthologs #255. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.italica:69

O84851              	100.00%		K3ZX54              	100.00%
                    	       		K3ZVB9              	41.85%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for K3ZX54 as seed ortholog is 100%.

Group of orthologs #256. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.italica:24

O84809              	100.00%		K3ZX27              	100.00%
Bootstrap support for O84809 as seed ortholog is 100%.
Bootstrap support for K3ZX27 as seed ortholog is 83%.

Group of orthologs #257. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 S.italica:69

P0CD82              	100.00%		K4ADR9              	100.00%
Bootstrap support for P0CD82 as seed ortholog is 100%.
Bootstrap support for K4ADR9 as seed ortholog is 100%.

Group of orthologs #258. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 S.italica:68

O84426              	100.00%		K3Z9N9              	100.00%
                    	       		K3ZCT8              	67.44%
                    	       		K3YUQ6              	65.99%
                    	       		K3XL40              	59.59%
                    	       		K3Z8V6              	58.14%
Bootstrap support for O84426 as seed ortholog is 100%.
Bootstrap support for K3Z9N9 as seed ortholog is 100%.

Group of orthologs #259. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 S.italica:68

O84441              	100.00%		K3YYM8              	100.00%
Bootstrap support for O84441 as seed ortholog is 100%.
Bootstrap support for K3YYM8 as seed ortholog is 100%.

Group of orthologs #260. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 S.italica:67

O84590              	100.00%		K3ZSI0              	100.00%
                    	       		K3YI06              	23.77%
                    	       		K3Z3Z9              	20.13%
                    	       		K3XVX4              	15.52%
                    	       		K3XH16              	15.31%
                    	       		K3XX85              	14.67%
                    	       		K3XG22              	14.24%
                    	       		K3YSX2              	14.24%
                    	       		K3ZRG0              	14.13%
                    	       		K4A6Y6              	14.13%
                    	       		K3XFA8              	13.70%
                    	       		K3ZRE6              	13.70%
                    	       		K3Y6S3              	13.60%
                    	       		K3YG80              	13.60%
                    	       		K3YRN3              	13.60%
                    	       		K3ZSE4              	13.60%
                    	       		K3XGQ9              	13.49%
                    	       		K3ZG75              	13.17%
                    	       		K3XEM8              	13.06%
                    	       		K3YQW7              	12.63%
                    	       		K4A698              	12.53%
                    	       		K3YSY1              	12.42%
                    	       		K3ZRV7              	12.42%
                    	       		K3Y5A3              	12.31%
                    	       		K3XG42              	12.21%
                    	       		K3ZIK3              	12.21%
                    	       		K4A776              	12.10%
                    	       		K3XFY3              	11.88%
                    	       		K4AJ07              	11.67%
                    	       		K3Z4L4              	11.56%
                    	       		K3ZQZ5              	11.56%
                    	       		K3XFG4              	10.81%
                    	       		K3XFN8              	9.74%
                    	       		K3YRF3              	9.53%
                    	       		K3ZS55              	9.10%
                    	       		K3YR45              	8.78%
                    	       		K4A997              	8.67%
                    	       		K3ZRW9              	8.35%
                    	       		K3ZR70              	8.14%
                    	       		K4A725              	8.14%
                    	       		K4A8Y0              	7.60%
                    	       		K3Z4Q8              	6.53%
                    	       		K4A6T7              	5.78%
Bootstrap support for O84590 as seed ortholog is 100%.
Bootstrap support for K3ZSI0 as seed ortholog is 100%.

Group of orthologs #261. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 S.italica:67

O84762              	100.00%		K3XR87              	100.00%
Bootstrap support for O84762 as seed ortholog is 100%.
Bootstrap support for K3XR87 as seed ortholog is 100%.

Group of orthologs #262. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 S.italica:67

O84611              	100.00%		K4AFC0              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for K4AFC0 as seed ortholog is 100%.

Group of orthologs #263. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 S.italica:66

P0CE05              	100.00%		K3Y087              	100.00%
Bootstrap support for P0CE05 as seed ortholog is 100%.
Bootstrap support for K3Y087 as seed ortholog is 100%.

Group of orthologs #264. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 S.italica:66

O84631              	100.00%		K3Z2W3              	100.00%
Bootstrap support for O84631 as seed ortholog is 100%.
Bootstrap support for K3Z2W3 as seed ortholog is 100%.

Group of orthologs #265. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 S.italica:65

O84299              	100.00%		K3XYK8              	100.00%
                    	       		K3ZCK9              	18.18%
Bootstrap support for O84299 as seed ortholog is 100%.
Bootstrap support for K3XYK8 as seed ortholog is 100%.

Group of orthologs #266. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 S.italica:64

O84368              	100.00%		K4AIV6              	100.00%
Bootstrap support for O84368 as seed ortholog is 100%.
Bootstrap support for K4AIV6 as seed ortholog is 100%.

Group of orthologs #267. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 S.italica:6

P66480              	100.00%		K4A177              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for K4A177 as seed ortholog is 54%.
Alternative seed ortholog is K3ZXP8 (6 bits away from this cluster)

Group of orthologs #268. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 S.italica:61

O84213              	100.00%		K3XJF2              	100.00%
                    	       		K3Z7P3              	47.83%
                    	       		K4ADA5              	11.06%
Bootstrap support for O84213 as seed ortholog is 100%.
Bootstrap support for K3XJF2 as seed ortholog is 100%.

Group of orthologs #269. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 S.italica:61

O84221              	100.00%		K4ALL4              	100.00%
                    	       		K3YSY7              	71.76%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for K4ALL4 as seed ortholog is 100%.

Group of orthologs #270. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 S.italica:60

P0CE08              	100.00%		K3XYN1              	100.00%
                    	       		K3Z2U2              	47.57%
                    	       		K3Z2K6              	38.83%
Bootstrap support for P0CE08 as seed ortholog is 100%.
Bootstrap support for K3XYN1 as seed ortholog is 100%.

Group of orthologs #271. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 S.italica:59

P0C0Z8              	100.00%		K4AH50              	100.00%
                    	       		K3ZXB8              	80.30%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for K4AH50 as seed ortholog is 100%.

Group of orthologs #272. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 S.italica:58

O84470              	100.00%		K4AD59              	100.00%
                    	       		K3XZ04              	40.93%
                    	       		K3XZ14              	35.74%
Bootstrap support for O84470 as seed ortholog is 100%.
Bootstrap support for K4AD59 as seed ortholog is 100%.

Group of orthologs #273. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 S.italica:57

O84527              	100.00%		K3ZWL4              	100.00%
                    	       		K3YIJ8              	86.60%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for K3ZWL4 as seed ortholog is 100%.

Group of orthologs #274. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 S.italica:56

P0CD86              	100.00%		K3YAH4              	100.00%
                    	       		K3ZK37              	100.00%
Bootstrap support for P0CD86 as seed ortholog is 100%.
Bootstrap support for K3YAH4 as seed ortholog is 100%.
Bootstrap support for K3ZK37 as seed ortholog is 100%.

Group of orthologs #275. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 S.italica:2

O84537              	100.00%		K3ZCI7              	100.00%
Bootstrap support for O84537 as seed ortholog is 100%.
Bootstrap support for K3ZCI7 as seed ortholog is 53%.
Alternative seed ortholog is K3YNY1 (2 bits away from this cluster)

Group of orthologs #276. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 S.italica:56

O84256              	100.00%		K4A040              	100.00%
Bootstrap support for O84256 as seed ortholog is 100%.
Bootstrap support for K4A040 as seed ortholog is 100%.

Group of orthologs #277. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 S.italica:9

O84209              	100.00%		K4AB20              	100.00%
O84151              	5.78%		K3XIK7              	39.28%
                    	       		K4A3T5              	26.83%
                    	       		K3XKD3              	14.66%
                    	       		K3ZV21              	13.97%
                    	       		K4ABS4              	13.28%
                    	       		K3YIC3              	12.45%
                    	       		K3XIY5              	12.17%
                    	       		K3Y928              	11.89%
                    	       		K3Z7F9              	11.76%
                    	       		K3ZJE6              	11.76%
                    	       		K3XJK0              	11.62%
                    	       		K3XQE8              	10.93%
                    	       		K3ZD03              	9.41%
                    	       		K4AC70              	8.71%
                    	       		K3Y8H3              	8.58%
                    	       		K3ZNU2              	6.22%
Bootstrap support for O84209 as seed ortholog is 100%.
Bootstrap support for K4AB20 as seed ortholog is 55%.
Alternative seed ortholog is K3Z8S2 (9 bits away from this cluster)

Group of orthologs #278. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 S.italica:3

O84239              	100.00%		K4AGE0              	100.00%
                    	       		K3ZAC3              	18.86%
                    	       		K3ZY05              	17.98%
                    	       		K4AKJ8              	17.11%
Bootstrap support for O84239 as seed ortholog is 100%.
Bootstrap support for K4AGE0 as seed ortholog is 50%.
Alternative seed ortholog is K3YK68 (3 bits away from this cluster)

Group of orthologs #279. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 S.italica:51

O84409              	100.00%		K3YT91              	100.00%
Bootstrap support for O84409 as seed ortholog is 100%.
Bootstrap support for K3YT91 as seed ortholog is 100%.

Group of orthologs #280. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 S.italica:50

O84261              	100.00%		K3ZNH3              	100.00%
                    	       		K3ZNL6              	70.28%
                    	       		K3Y7K3              	41.11%
                    	       		K4AB66              	22.66%
                    	       		K3Z5P5              	16.01%
                    	       		K3XYN6              	15.47%
                    	       		K3YTU1              	15.47%
                    	       		K3XJ63              	14.38%
                    	       		K3Z8L0              	13.98%
                    	       		K3ZVS0              	13.03%
                    	       		K3Y8T3              	12.48%
                    	       		K3XY27              	12.21%
                    	       		K3YTQ3              	12.21%
                    	       		K3YIK2              	11.94%
                    	       		K3YTH0              	11.53%
                    	       		K3ZUB7              	11.26%
                    	       		K3Y978              	10.58%
                    	       		K3Z6S4              	10.58%
                    	       		K3XXV9              	10.31%
                    	       		K3Y979              	10.31%
                    	       		K3XXU6              	9.77%
                    	       		K3Z723              	9.23%
                    	       		K3XIL9              	8.96%
                    	       		K3Z6G5              	8.96%
                    	       		K3XXS6              	8.82%
                    	       		K4ABK3              	8.82%
                    	       		K4AA30              	8.68%
                    	       		K3ZUI2              	8.55%
                    	       		K3XH92              	8.28%
                    	       		K4AA93              	8.28%
                    	       		K3XH73              	8.14%
                    	       		K3YTI7              	8.01%
                    	       		K3Y7X9              	7.87%
                    	       		K3Z7L7              	7.87%
                    	       		K3ZUJ7              	7.73%
                    	       		K4ABK2              	7.46%
                    	       		K3Z6W0              	7.33%
                    	       		K3ZTI3              	7.33%
                    	       		K4AB28              	7.33%
                    	       		K3ZTI1              	7.33%
                    	       		K3Y782              	6.92%
                    	       		K3ZEC1              	6.78%
                    	       		K4AAV8              	6.65%
                    	       		K3YSF4              	6.65%
                    	       		K4ABH2              	6.51%
                    	       		K3XII6              	6.38%
                    	       		K3Y6K6              	6.24%
                    	       		K3Y7A7              	6.11%
                    	       		K3YTJ4              	6.11%
                    	       		K3XI67              	5.97%
                    	       		K3XXH8              	5.97%
                    	       		K3YT95              	5.97%
                    	       		K4AAU8              	5.97%
                    	       		K3YRK7              	5.83%
                    	       		K3ZT55              	5.83%
                    	       		K3ZTG1              	5.56%
                    	       		K3YT27              	5.43%
                    	       		K4AAV1              	5.43%
                    	       		K4ABE1              	5.16%
Bootstrap support for O84261 as seed ortholog is 100%.
Bootstrap support for K3ZNH3 as seed ortholog is 100%.

Group of orthologs #281. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 S.italica:50

O84350              	100.00%		K3ZUK7              	100.00%
                    	       		K3YUD4              	45.39%
                    	       		K3YUH7              	43.87%
                    	       		K3YZV0              	42.21%
                    	       		K3YZ50              	33.59%
                    	       		K3YZM0              	20.12%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for K3ZUK7 as seed ortholog is 100%.

Group of orthologs #282. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 S.italica:49

O84032              	100.00%		K3Y905              	100.00%
                    	       		K3YE64              	99.82%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for K3Y905 as seed ortholog is 100%.

Group of orthologs #283. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 S.italica:49

Q46370              	100.00%		K3XQT0              	100.00%
Bootstrap support for Q46370 as seed ortholog is 100%.
Bootstrap support for K3XQT0 as seed ortholog is 100%.

Group of orthologs #284. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 S.italica:47

O84805              	100.00%		K3XKZ2              	100.00%
                    	       		K4AEB1              	20.62%
Bootstrap support for O84805 as seed ortholog is 100%.
Bootstrap support for K3XKZ2 as seed ortholog is 100%.

Group of orthologs #285. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 S.italica:47

O84466              	100.00%		K3ZYD8              	100.00%
                    	       		K3ZB46              	90.32%
Bootstrap support for O84466 as seed ortholog is 100%.
Bootstrap support for K3ZYD8 as seed ortholog is 100%.

Group of orthologs #286. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 S.italica:46

O84836              	100.00%		K3XSY8              	100.00%
Bootstrap support for O84836 as seed ortholog is 100%.
Bootstrap support for K3XSY8 as seed ortholog is 100%.

Group of orthologs #287. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 S.italica:46

O84792              	100.00%		K4AL94              	100.00%
Bootstrap support for O84792 as seed ortholog is 100%.
Bootstrap support for K4AL94 as seed ortholog is 100%.

Group of orthologs #288. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 S.italica:43

O84586              	100.00%		K4ADB6              	100.00%
                    	       		K3YTQ7              	22.31%
Bootstrap support for O84586 as seed ortholog is 100%.
Bootstrap support for K4ADB6 as seed ortholog is 100%.