###################################
135 groups of orthologs
141 in-paralogs from C.trachomatis
232 in-paralogs from P.pacificus
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 883 bits
Score difference with first non-orthologous sequence - C.trachomatis:883 P.pacificus:883

O84022              	100.00%		H3DXV3              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for H3DXV3 as seed ortholog is 100%.

Group of orthologs #2. Best score 783 bits
Score difference with first non-orthologous sequence - C.trachomatis:783 P.pacificus:783

O84250              	100.00%		H3EW53              	100.00%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for H3EW53 as seed ortholog is 100%.

Group of orthologs #3. Best score 713 bits
Score difference with first non-orthologous sequence - C.trachomatis:713 P.pacificus:153

P17821              	100.00%		H3E5X7              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for H3E5X7 as seed ortholog is 99%.

Group of orthologs #4. Best score 562 bits
Score difference with first non-orthologous sequence - C.trachomatis:562 P.pacificus:297

O84716              	100.00%		H3DYS6              	100.00%
                    	       		H3DT82              	32.38%
Bootstrap support for O84716 as seed ortholog is 100%.
Bootstrap support for H3DYS6 as seed ortholog is 100%.

Group of orthologs #5. Best score 511 bits
Score difference with first non-orthologous sequence - C.trachomatis:511 P.pacificus:511

O84304              	100.00%		H3G233              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for H3G233 as seed ortholog is 100%.

Group of orthologs #6. Best score 494 bits
Score difference with first non-orthologous sequence - C.trachomatis:494 P.pacificus:326

O84444              	100.00%		H3DS35              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for H3DS35 as seed ortholog is 100%.

Group of orthologs #7. Best score 493 bits
Score difference with first non-orthologous sequence - C.trachomatis:326 P.pacificus:423

P0C0Z7              	100.00%		H3FT54              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for H3FT54 as seed ortholog is 100%.

Group of orthologs #8. Best score 472 bits
Score difference with first non-orthologous sequence - C.trachomatis:472 P.pacificus:333

O84066              	100.00%		H3E395              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for H3E395 as seed ortholog is 100%.

Group of orthologs #9. Best score 466 bits
Score difference with first non-orthologous sequence - C.trachomatis:466 P.pacificus:466

O84834              	100.00%		H3EEH2              	100.00%
                    	       		H3FRI4              	42.36%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for H3EEH2 as seed ortholog is 100%.

Group of orthologs #10. Best score 443 bits
Score difference with first non-orthologous sequence - C.trachomatis:443 P.pacificus:208

O84057              	100.00%		H3EL88              	100.00%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for H3EL88 as seed ortholog is 99%.

Group of orthologs #11. Best score 435 bits
Score difference with first non-orthologous sequence - C.trachomatis:435 P.pacificus:435

O84863              	100.00%		H3FRB3              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for H3FRB3 as seed ortholog is 100%.

Group of orthologs #12. Best score 434 bits
Score difference with first non-orthologous sequence - C.trachomatis:434 P.pacificus:434

O84848              	100.00%		H3ESH7              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for H3ESH7 as seed ortholog is 100%.

Group of orthologs #13. Best score 429 bits
Score difference with first non-orthologous sequence - C.trachomatis:429 P.pacificus:429

O84585              	100.00%		H3FVH0              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for H3FVH0 as seed ortholog is 100%.

Group of orthologs #14. Best score 412 bits
Score difference with first non-orthologous sequence - C.trachomatis:412 P.pacificus:81

O84126              	100.00%		H3FND8              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for H3FND8 as seed ortholog is 97%.

Group of orthologs #15. Best score 406 bits
Score difference with first non-orthologous sequence - C.trachomatis:406 P.pacificus:406

O84460              	100.00%		H3FCG0              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for H3FCG0 as seed ortholog is 100%.

Group of orthologs #16. Best score 367 bits
Score difference with first non-orthologous sequence - C.trachomatis:367 P.pacificus:367

O84591              	100.00%		H3EAP3              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for H3EAP3 as seed ortholog is 100%.

Group of orthologs #17. Best score 366 bits
Score difference with first non-orthologous sequence - C.trachomatis:325 P.pacificus:366

O84310              	100.00%		H3E0X4              	100.00%
                    	       		H3FMM2              	46.23%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for H3E0X4 as seed ortholog is 100%.

Group of orthologs #18. Best score 351 bits
Score difference with first non-orthologous sequence - C.trachomatis:351 P.pacificus:351

P0CE13              	100.00%		H3ESL5              	100.00%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for H3ESL5 as seed ortholog is 100%.

Group of orthologs #19. Best score 340 bits
Score difference with first non-orthologous sequence - C.trachomatis:340 P.pacificus:185

P0CD71              	100.00%		H3EZP1              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for H3EZP1 as seed ortholog is 99%.

Group of orthologs #20. Best score 339 bits
Score difference with first non-orthologous sequence - C.trachomatis:339 P.pacificus:339

Q59321              	100.00%		H3F9V0              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for H3F9V0 as seed ortholog is 100%.

Group of orthologs #21. Best score 318 bits
Score difference with first non-orthologous sequence - C.trachomatis:318 P.pacificus:175

O84546              	100.00%		H3F484              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for H3F484 as seed ortholog is 99%.

Group of orthologs #22. Best score 311 bits
Score difference with first non-orthologous sequence - C.trachomatis:311 P.pacificus:99

O84248              	100.00%		H3E902              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for H3E902 as seed ortholog is 99%.

Group of orthologs #23. Best score 310 bits
Score difference with first non-orthologous sequence - C.trachomatis:310 P.pacificus:310

O84067              	100.00%		H3ETQ2              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for H3ETQ2 as seed ortholog is 100%.

Group of orthologs #24. Best score 291 bits
Score difference with first non-orthologous sequence - C.trachomatis:291 P.pacificus:291

O84711              	100.00%		H3ECJ3              	100.00%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for H3ECJ3 as seed ortholog is 100%.

Group of orthologs #25. Best score 285 bits
Score difference with first non-orthologous sequence - C.trachomatis:285 P.pacificus:124

O84098              	100.00%		H3EW12              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for H3EW12 as seed ortholog is 99%.

Group of orthologs #26. Best score 285 bits
Score difference with first non-orthologous sequence - C.trachomatis:285 P.pacificus:191

O84211              	100.00%		H3FZQ5              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for H3FZQ5 as seed ortholog is 99%.

Group of orthologs #27. Best score 284 bits
Score difference with first non-orthologous sequence - C.trachomatis:284 P.pacificus:284

O84315              	100.00%		H3F5G0              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for H3F5G0 as seed ortholog is 100%.

Group of orthologs #28. Best score 271 bits
Score difference with first non-orthologous sequence - C.trachomatis:271 P.pacificus:271

O84316              	100.00%		H3G223              	100.00%
                    	       		H3FHF9              	13.98%
                    	       		H3FM78              	6.70%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for H3G223 as seed ortholog is 100%.

Group of orthologs #29. Best score 264 bits
Score difference with first non-orthologous sequence - C.trachomatis:264 P.pacificus:264

O84439              	100.00%		H3E2U4              	100.00%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for H3E2U4 as seed ortholog is 100%.

Group of orthologs #30. Best score 252 bits
Score difference with first non-orthologous sequence - C.trachomatis:252 P.pacificus:252

O84309              	100.00%		H3F9B3              	100.00%
                    	       		H3FK48              	32.14%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for H3F9B3 as seed ortholog is 100%.

Group of orthologs #31. Best score 251 bits
Score difference with first non-orthologous sequence - C.trachomatis:251 P.pacificus:251

O84787              	100.00%		H3E3J0              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for H3E3J0 as seed ortholog is 100%.

Group of orthologs #32. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:250 P.pacificus:94

O84561              	100.00%		H3EL89              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for H3EL89 as seed ortholog is 99%.

Group of orthologs #33. Best score 239 bits
Score difference with first non-orthologous sequence - C.trachomatis:239 P.pacificus:239

P0CD78              	100.00%		H3DRJ6              	100.00%
                    	       		H3ESU2              	42.30%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for H3DRJ6 as seed ortholog is 100%.

Group of orthologs #34. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:237 P.pacificus:237

O84094              	100.00%		H3E9S2              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for H3E9S2 as seed ortholog is 100%.

Group of orthologs #35. Best score 235 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 P.pacificus:235

O84058              	100.00%		H3F473              	100.00%
Bootstrap support for O84058 as seed ortholog is 98%.
Bootstrap support for H3F473 as seed ortholog is 100%.

Group of orthologs #36. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 P.pacificus:233

O84360              	100.00%		H3F8T1              	100.00%
Bootstrap support for O84360 as seed ortholog is 100%.
Bootstrap support for H3F8T1 as seed ortholog is 100%.

Group of orthologs #37. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 P.pacificus:228

P0CE21              	100.00%		H3G361              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for H3G361 as seed ortholog is 100%.

Group of orthologs #38. Best score 227 bits
Score difference with first non-orthologous sequence - C.trachomatis:227 P.pacificus:176

O84381              	100.00%		H3G2J3              	100.00%
                    	       		H3FGP4              	64.79%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for H3G2J3 as seed ortholog is 100%.

Group of orthologs #39. Best score 219 bits
Score difference with first non-orthologous sequence - C.trachomatis:219 P.pacificus:114

O84352              	100.00%		H3DSF5              	100.00%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for H3DSF5 as seed ortholog is 99%.

Group of orthologs #40. Best score 219 bits
Score difference with first non-orthologous sequence - C.trachomatis:219 P.pacificus:123

O84035              	100.00%		H3EGW9              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for H3EGW9 as seed ortholog is 99%.

Group of orthologs #41. Best score 214 bits
Score difference with first non-orthologous sequence - C.trachomatis:214 P.pacificus:214

O84823              	100.00%		H3F2P7              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for H3F2P7 as seed ortholog is 100%.

Group of orthologs #42. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 P.pacificus:63

O84266              	100.00%		H3DUA8              	100.00%
                    	       		H3E2W0              	7.56%
                    	       		H3E9P9              	7.56%
                    	       		H3E4R9              	5.91%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for H3DUA8 as seed ortholog is 93%.

Group of orthologs #43. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 P.pacificus:212

O84562              	100.00%		H3EZQ6              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for H3EZQ6 as seed ortholog is 100%.

Group of orthologs #44. Best score 210 bits
Score difference with first non-orthologous sequence - C.trachomatis:210 P.pacificus:210

O84698              	100.00%		H3F427              	100.00%
                    	       		H3FR55              	44.30%
                    	       		H3EPC6              	13.56%
                    	       		H3FHY4              	13.29%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for H3F427 as seed ortholog is 100%.

Group of orthologs #45. Best score 209 bits
Score difference with first non-orthologous sequence - C.trachomatis:209 P.pacificus:209

O84829              	100.00%		H3F153              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for H3F153 as seed ortholog is 100%.

Group of orthologs #46. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 P.pacificus:133

O84596              	100.00%		H3G214              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for H3G214 as seed ortholog is 98%.

Group of orthologs #47. Best score 206 bits
Score difference with first non-orthologous sequence - C.trachomatis:206 P.pacificus:73

O84732              	100.00%		H3FSX5              	100.00%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for H3FSX5 as seed ortholog is 94%.

Group of orthologs #48. Best score 200 bits
Score difference with first non-orthologous sequence - C.trachomatis:200 P.pacificus:200

P0CE09              	100.00%		H3EQN7              	100.00%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for H3EQN7 as seed ortholog is 100%.

Group of orthologs #49. Best score 198 bits
Score difference with first non-orthologous sequence - C.trachomatis:198 P.pacificus:11

O84028              	100.00%		H3F585              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for H3F585 as seed ortholog is 61%.
Alternative seed ortholog is H3F583 (11 bits away from this cluster)

Group of orthologs #50. Best score 192 bits
Score difference with first non-orthologous sequence - C.trachomatis:192 P.pacificus:136

O84786              	100.00%		H3F5L5              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for H3F5L5 as seed ortholog is 99%.

Group of orthologs #51. Best score 192 bits
Score difference with first non-orthologous sequence - C.trachomatis:192 P.pacificus:32

O84188              	100.00%		H3G4M8              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for H3G4M8 as seed ortholog is 82%.

Group of orthologs #52. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 P.pacificus:63

O84406              	100.00%		H3FJ86              	100.00%
                    	       		H3FCU9              	8.35%
Bootstrap support for O84406 as seed ortholog is 99%.
Bootstrap support for H3FJ86 as seed ortholog is 95%.

Group of orthologs #53. Best score 187 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 P.pacificus:187

O84249              	100.00%		H3FWD8              	100.00%
Bootstrap support for O84249 as seed ortholog is 98%.
Bootstrap support for H3FWD8 as seed ortholog is 100%.

Group of orthologs #54. Best score 186 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 P.pacificus:186

O84755              	100.00%		H3EGL8              	100.00%
Bootstrap support for O84755 as seed ortholog is 99%.
Bootstrap support for H3EGL8 as seed ortholog is 100%.

Group of orthologs #55. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 P.pacificus:184

O84613              	100.00%		H3DTW2              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for H3DTW2 as seed ortholog is 100%.

Group of orthologs #56. Best score 181 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 P.pacificus:181

O84712              	100.00%		H3F1N1              	100.00%
Bootstrap support for O84712 as seed ortholog is 99%.
Bootstrap support for H3F1N1 as seed ortholog is 100%.

Group of orthologs #57. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 P.pacificus:88

O84247              	100.00%		H3FKF6              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for H3FKF6 as seed ortholog is 99%.

Group of orthologs #58. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 P.pacificus:87

O84608              	100.00%		H3ENI4              	100.00%
                    	       		H3G191              	20.94%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for H3ENI4 as seed ortholog is 99%.

Group of orthologs #59. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 P.pacificus:18

O84345              	100.00%		H3EXI7              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for H3EXI7 as seed ortholog is 78%.

Group of orthologs #60. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 P.pacificus:34

O84734              	100.00%		H3E3C8              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for H3E3C8 as seed ortholog is 77%.

Group of orthologs #61. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 P.pacificus:71

O84642              	100.00%		H3E9Y7              	100.00%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for H3E9Y7 as seed ortholog is 97%.

Group of orthologs #62. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 P.pacificus:173

O84196              	100.00%		H3F3S2              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for H3F3S2 as seed ortholog is 100%.

Group of orthologs #63. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 P.pacificus:54

P38004              	100.00%		H3F5M6              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for H3F5M6 as seed ortholog is 94%.

Group of orthologs #64. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 P.pacificus:170

P0CD72              	100.00%		H3FL10              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for H3FL10 as seed ortholog is 100%.

Group of orthologs #65. Best score 169 bits
Score difference with first non-orthologous sequence - C.trachomatis:169 P.pacificus:169

O84859              	100.00%		H3EC12              	100.00%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for H3EC12 as seed ortholog is 100%.

Group of orthologs #66. Best score 167 bits
Score difference with first non-orthologous sequence - C.trachomatis:167 P.pacificus:167

O84676              	100.00%		H3FQP8              	100.00%
O84722              	11.95%		
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for H3FQP8 as seed ortholog is 100%.

Group of orthologs #67. Best score 162 bits
Score difference with first non-orthologous sequence - C.trachomatis:162 P.pacificus:162

O84797              	100.00%		H3EZG2              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for H3EZG2 as seed ortholog is 100%.

Group of orthologs #68. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 P.pacificus:145

O84332              	100.00%		H3FKF2              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for H3FKF2 as seed ortholog is 100%.

Group of orthologs #69. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 P.pacificus:143

O84049              	100.00%		H3DZZ8              	100.00%
                    	       		H3F5P9              	40.79%
                    	       		H3DZZ0              	18.30%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for H3DZZ8 as seed ortholog is 100%.

Group of orthologs #70. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 P.pacificus:135

O84006              	100.00%		H3FF90              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for H3FF90 as seed ortholog is 100%.

Group of orthologs #71. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 P.pacificus:70

O84589              	100.00%		H3EL48              	100.00%
                    	       		H3FQY8              	90.58%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for H3EL48 as seed ortholog is 97%.

Group of orthologs #72. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 P.pacificus:129

O84835              	100.00%		H3FJK2              	100.00%
                    	       		H3FVE7              	96.89%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for H3FJK2 as seed ortholog is 100%.

Group of orthologs #73. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 P.pacificus:74

O84033              	100.00%		H3DVI8              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for H3DVI8 as seed ortholog is 99%.

Group of orthologs #74. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 P.pacificus:127

O84234              	100.00%		H3DRM2              	100.00%
                    	       		H3DZG5              	23.05%
                    	       		H3DXU6              	10.42%
                    	       		H3FTB7              	7.65%
                    	       		H3EZ53              	6.03%
Bootstrap support for O84234 as seed ortholog is 100%.
Bootstrap support for H3DRM2 as seed ortholog is 100%.

Group of orthologs #75. Best score 113 bits
Score difference with first non-orthologous sequence - C.trachomatis:113 P.pacificus:113

O84508              	100.00%		H3DVE9              	100.00%
                    	       		H3FJL0              	100.00%
                    	       		H3FC51              	41.87%
                    	       		H3EN54              	21.67%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for H3DVE9 as seed ortholog is 100%.
Bootstrap support for H3FJL0 as seed ortholog is 100%.

Group of orthologs #76. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 P.pacificus:109

O84649              	100.00%		H3FCH9              	100.00%
                    	       		H3G0S0              	16.14%
                    	       		H3G0S1              	14.41%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for H3FCH9 as seed ortholog is 100%.

Group of orthologs #77. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 P.pacificus:109

O84828              	100.00%		H3F5Q1              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for H3F5Q1 as seed ortholog is 100%.

Group of orthologs #78. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 P.pacificus:103

O84294              	100.00%		H3EM90              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for H3EM90 as seed ortholog is 100%.

Group of orthologs #79. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 P.pacificus:102

O84864              	100.00%		H3FD78              	100.00%
                    	       		H3FZ60              	56.77%
                    	       		H3ERY4              	18.58%
                    	       		H3E7K6              	11.82%
                    	       		H3F8M9              	11.20%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for H3FD78 as seed ortholog is 100%.

Group of orthologs #80. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 P.pacificus:102

O84391              	100.00%		H3FZC8              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for H3FZC8 as seed ortholog is 100%.

Group of orthologs #81. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 P.pacificus:101

O84548              	100.00%		H3G2F8              	100.00%
                    	       		H3EGL5              	21.96%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for H3G2F8 as seed ortholog is 100%.

Group of orthologs #82. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:29 P.pacificus:15

O84660              	100.00%		H3FL58              	100.00%
                    	       		H3ED50              	82.05%
                    	       		H3DV12              	11.18%
                    	       		H3DV11              	10.55%
Bootstrap support for O84660 as seed ortholog is 84%.
Bootstrap support for H3FL58 as seed ortholog is 67%.
Alternative seed ortholog is H3EEW1 (15 bits away from this cluster)

Group of orthologs #83. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 P.pacificus:98

O84358              	100.00%		H3FFJ8              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for H3FFJ8 as seed ortholog is 100%.

Group of orthologs #84. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 P.pacificus:98

O84843              	100.00%		H3FVW8              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for H3FVW8 as seed ortholog is 100%.

Group of orthologs #85. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 P.pacificus:97

O84130              	100.00%		H3F5G9              	100.00%
                    	       		H3F8K6              	6.37%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for H3F5G9 as seed ortholog is 100%.

Group of orthologs #86. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 P.pacificus:51

O84390              	100.00%		H3DWV0              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for H3DWV0 as seed ortholog is 99%.

Group of orthologs #87. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:93 P.pacificus:17

O84530              	100.00%		A6YM72              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for A6YM72 as seed ortholog is 70%.
Alternative seed ortholog is H3F360 (17 bits away from this cluster)

Group of orthologs #88. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:21 P.pacificus:36

O84154              	100.00%		H3E9J0              	100.00%
                    	       		H3F327              	54.86%
                    	       		H3EWI1              	52.92%
                    	       		H3FPQ6              	30.89%
                    	       		H3F710              	30.67%
                    	       		H3FNW5              	29.16%
                    	       		H3EL68              	28.51%
                    	       		H3DUQ8              	26.13%
                    	       		H3E3H0              	25.49%
                    	       		H3F680              	6.91%
Bootstrap support for O84154 as seed ortholog is 74%.
Alternative seed ortholog is O84421 (21 bits away from this cluster)
Bootstrap support for H3E9J0 as seed ortholog is 86%.

Group of orthologs #89. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 P.pacificus:2

O84781              	100.00%		H3FSE2              	100.00%
                    	       		H3EK93              	47.66%
                    	       		H3ENE1              	37.58%
                    	       		H3EJF3              	36.73%
                    	       		H3EYK8              	35.35%
                    	       		H3E7S9              	24.63%
                    	       		H3FZ49              	19.43%
                    	       		H3EVH9              	17.09%
                    	       		H3ETW3              	17.09%
                    	       		H3E009              	15.29%
                    	       		H3G152              	15.29%
                    	       		H3EYK7              	14.44%
                    	       		H3FXH4              	14.23%
                    	       		H3E2C6              	8.49%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for H3FSE2 as seed ortholog is 56%.
Alternative seed ortholog is H3E9L3 (2 bits away from this cluster)

Group of orthologs #90. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 P.pacificus:90

O84435              	100.00%		H3EZS7              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for H3EZS7 as seed ortholog is 100%.

Group of orthologs #91. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 P.pacificus:89

O84241              	100.00%		H3G166              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for H3G166 as seed ortholog is 100%.

Group of orthologs #92. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 P.pacificus:87

O84478              	100.00%		H3F6V8              	100.00%
Bootstrap support for O84478 as seed ortholog is 100%.
Bootstrap support for H3F6V8 as seed ortholog is 100%.

Group of orthologs #93. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 P.pacificus:86

O84215              	100.00%		H3EZT1              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for H3EZT1 as seed ortholog is 100%.

Group of orthologs #94. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 P.pacificus:85

O84578              	100.00%		H3FH54              	100.00%
                    	       		H3EQ95              	72.35%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for H3FH54 as seed ortholog is 100%.

Group of orthologs #95. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 P.pacificus:84

O84212              	100.00%		H3E8P7              	100.00%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for H3E8P7 as seed ortholog is 100%.

Group of orthologs #96. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 P.pacificus:84

P0CD79              	100.00%		H3ED84              	100.00%
Bootstrap support for P0CD79 as seed ortholog is 100%.
Bootstrap support for H3ED84 as seed ortholog is 100%.

Group of orthologs #97. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:31 P.pacificus:82

O84204              	100.00%		H3FIM9              	100.00%
O84696              	22.76%		H3FGZ5              	44.82%
                    	       		H3FY45              	32.84%
                    	       		H3FNW8              	28.11%
                    	       		H3FUB8              	19.23%
                    	       		H3ESE4              	16.12%
                    	       		H3E3G9              	15.98%
Bootstrap support for O84204 as seed ortholog is 85%.
Bootstrap support for H3FIM9 as seed ortholog is 100%.

Group of orthologs #98. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 P.pacificus:82

O84307              	100.00%		H3EYW8              	100.00%
                    	       		H3F3E5              	44.01%
                    	       		H3FNX0              	28.07%
                    	       		H3G1E4              	26.41%
                    	       		H3EGM8              	25.77%
Bootstrap support for O84307 as seed ortholog is 100%.
Bootstrap support for H3EYW8 as seed ortholog is 100%.

Group of orthologs #99. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 P.pacificus:82

P55137              	100.00%		H3E6G4              	100.00%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for H3E6G4 as seed ortholog is 100%.

Group of orthologs #100. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 P.pacificus:82

O84599              	100.00%		H3EJG6              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for H3EJG6 as seed ortholog is 100%.

Group of orthologs #101. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 P.pacificus:79

O84665              	100.00%		H3G0R0              	100.00%
O84108              	5.91%		
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for H3G0R0 as seed ortholog is 100%.

Group of orthologs #102. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 P.pacificus:79

O84499              	100.00%		H3G1U4              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for H3G1U4 as seed ortholog is 100%.

Group of orthologs #103. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 P.pacificus:78

O84650              	100.00%		H3E9T2              	100.00%
                    	       		H3FIF8              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for H3E9T2 as seed ortholog is 100%.
Bootstrap support for H3FIF8 as seed ortholog is 100%.

Group of orthologs #104. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 P.pacificus:77

O84547              	100.00%		H3F4W3              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for H3F4W3 as seed ortholog is 100%.

Group of orthologs #105. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:5 P.pacificus:76

O84695              	100.00%		H3E3T1              	100.00%
O84205              	14.35%		H3FY44              	90.72%
O84132              	7.28%		H3DUQ9              	40.14%
                    	       		H3FUB9              	32.71%
                    	       		H3EX67              	22.74%
                    	       		H3EPW6              	12.99%
                    	       		H3EB34              	7.66%
Bootstrap support for O84695 as seed ortholog is 51%.
Alternative seed ortholog is O84071 (5 bits away from this cluster)
Bootstrap support for H3E3T1 as seed ortholog is 100%.

Group of orthologs #106. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 P.pacificus:76

P0CD81              	100.00%		H3DZB3              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for H3DZB3 as seed ortholog is 100%.

Group of orthologs #107. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 P.pacificus:32

O84687              	100.00%		H3G2Z6              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for H3G2Z6 as seed ortholog is 93%.

Group of orthologs #108. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 P.pacificus:75

O84668              	100.00%		H3EX84              	100.00%
O84193              	16.29%		
Bootstrap support for O84668 as seed ortholog is 100%.
Bootstrap support for H3EX84 as seed ortholog is 100%.

Group of orthologs #109. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 P.pacificus:72

O84139              	100.00%		H3EHF3              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for H3EHF3 as seed ortholog is 100%.

Group of orthologs #110. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 P.pacificus:71

O84822              	100.00%		H3FK94              	100.00%
                    	       		H3FS39              	65.32%
                    	       		H3FJ77              	51.93%
                    	       		H3FJB6              	50.39%
                    	       		H3EFS7              	49.23%
                    	       		H3FAQ9              	42.87%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for H3FK94 as seed ortholog is 100%.

Group of orthologs #111. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 P.pacificus:71

O84463              	100.00%		H3FC53              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for H3FC53 as seed ortholog is 100%.

Group of orthologs #112. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 P.pacificus:69

P0CE06              	100.00%		H3E9K9              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for H3E9K9 as seed ortholog is 100%.

Group of orthologs #113. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 P.pacificus:5

O84544              	100.00%		H3EYN0              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for H3EYN0 as seed ortholog is 57%.
Alternative seed ortholog is H3EWF4 (5 bits away from this cluster)

Group of orthologs #114. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 P.pacificus:67

P0C0Z8              	100.00%		H3FT56              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for H3FT56 as seed ortholog is 100%.

Group of orthologs #115. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 P.pacificus:62

O84496              	100.00%		H3EV38              	100.00%
                    	       		H3EJ04              	9.60%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for H3EV38 as seed ortholog is 100%.

Group of orthologs #116. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 P.pacificus:61

P36424              	100.00%		H3DU86              	100.00%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for H3DU86 as seed ortholog is 100%.

Group of orthologs #117. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 P.pacificus:12

P66370              	100.00%		H3ES67              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for H3ES67 as seed ortholog is 68%.
Alternative seed ortholog is H3EGM1 (12 bits away from this cluster)

Group of orthologs #118. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 P.pacificus:60

P0A4C8              	100.00%		H3F510              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for H3F510 as seed ortholog is 100%.

Group of orthologs #119. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 P.pacificus:57

P0CE04              	100.00%		H3F594              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for H3F594 as seed ortholog is 100%.

Group of orthologs #120. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 P.pacificus:56

O84218              	100.00%		H3EDG7              	100.00%
                    	       		H3EJ07              	30.62%
                    	       		H3F217              	23.13%
                    	       		H3FEI7              	16.97%
                    	       		H3EAH9              	9.95%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for H3EDG7 as seed ortholog is 100%.

Group of orthologs #121. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 P.pacificus:56

O84527              	100.00%		H3FQS7              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for H3FQS7 as seed ortholog is 100%.

Group of orthologs #122. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 P.pacificus:55

P0CD80              	100.00%		H3FT97              	100.00%
                    	       		H3DXD0              	37.99%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for H3FT97 as seed ortholog is 100%.

Group of orthologs #123. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 P.pacificus:54

O84826              	100.00%		H3EEB9              	100.00%
                    	       		H3EII2              	18.59%
                    	       		H3EII4              	5.56%
Bootstrap support for O84826 as seed ortholog is 100%.
Bootstrap support for H3EEB9 as seed ortholog is 100%.

Group of orthologs #124. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 P.pacificus:53

O84782              	100.00%		H3FQJ9              	100.00%
                    	       		H3FWE3              	5.23%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for H3FQJ9 as seed ortholog is 100%.

Group of orthologs #125. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 P.pacificus:52

O84618              	100.00%		H3FEX9              	100.00%
                    	       		H3EJE5              	6.93%
Bootstrap support for O84618 as seed ortholog is 100%.
Bootstrap support for H3FEX9 as seed ortholog is 100%.

Group of orthologs #126. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 P.pacificus:52

O84127              	100.00%		H3FZQ1              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for H3FZQ1 as seed ortholog is 100%.

Group of orthologs #127. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 P.pacificus:51

O84689              	100.00%		H3G2I6              	100.00%
Bootstrap support for O84689 as seed ortholog is 100%.
Bootstrap support for H3G2I6 as seed ortholog is 100%.

Group of orthologs #128. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 P.pacificus:50

O84123              	100.00%		H3EQS1              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for H3EQS1 as seed ortholog is 100%.

Group of orthologs #129. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 P.pacificus:49

O84221              	100.00%		H3DZA6              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for H3DZA6 as seed ortholog is 100%.

Group of orthologs #130. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 P.pacificus:49

O84762              	100.00%		H3F9Y6              	100.00%
Bootstrap support for O84762 as seed ortholog is 100%.
Bootstrap support for H3F9Y6 as seed ortholog is 100%.

Group of orthologs #131. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 P.pacificus:47

O84284              	100.00%		H3FAB2              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for H3FAB2 as seed ortholog is 100%.

Group of orthologs #132. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 P.pacificus:45

O84682              	100.00%		H3EZN8              	100.00%
                    	       		H3FD29              	100.00%
                    	       		H3DYX7              	70.15%
Bootstrap support for O84682 as seed ortholog is 100%.
Bootstrap support for H3EZN8 as seed ortholog is 100%.
Bootstrap support for H3FD29 as seed ortholog is 100%.

Group of orthologs #133. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 P.pacificus:43

O84777              	100.00%		H3EGZ7              	100.00%
                    	       		H3FYK4              	70.73%
                    	       		H3FII0              	68.47%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for H3EGZ7 as seed ortholog is 100%.

Group of orthologs #134. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 P.pacificus:42

O84779              	100.00%		H3FS80              	100.00%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for H3FS80 as seed ortholog is 100%.

Group of orthologs #135. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 P.pacificus:42

O84469              	100.00%		H3G2C1              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for H3G2C1 as seed ortholog is 100%.