###################################
196 groups of orthologs
201 in-paralogs from C.trachomatis
388 in-paralogs from O.cuniculus
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 915 bits
Score difference with first non-orthologous sequence - C.trachomatis:915 O.cuniculus:611

O84022              	100.00%		G1TCK9              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for G1TCK9 as seed ortholog is 100%.

Group of orthologs #2. Best score 860 bits
Score difference with first non-orthologous sequence - C.trachomatis:860 O.cuniculus:860

O84250              	100.00%		P00489              	100.00%
                    	       		G1SIB9              	68.16%
                    	       		G1T9M7              	65.10%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for P00489 as seed ortholog is 100%.

Group of orthologs #3. Best score 712 bits
Score difference with first non-orthologous sequence - C.trachomatis:712 O.cuniculus:157

P17821              	100.00%		G1TRT8              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for G1TRT8 as seed ortholog is 99%.

Group of orthologs #4. Best score 622 bits
Score difference with first non-orthologous sequence - C.trachomatis:622 O.cuniculus:622

O84716              	100.00%		G1SIF2              	100.00%
                    	       		G1TEQ1              	47.89%
Bootstrap support for O84716 as seed ortholog is 100%.
Bootstrap support for G1SIF2 as seed ortholog is 100%.

Group of orthologs #5. Best score 594 bits
Score difference with first non-orthologous sequence - C.trachomatis:594 O.cuniculus:403

O84067              	100.00%		G1TEQ8              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for G1TEQ8 as seed ortholog is 100%.

Group of orthologs #6. Best score 537 bits
Score difference with first non-orthologous sequence - C.trachomatis:350 O.cuniculus:461

P0C0Z7              	100.00%		G1T3Y8              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for G1T3Y8 as seed ortholog is 100%.

Group of orthologs #7. Best score 519 bits
Score difference with first non-orthologous sequence - C.trachomatis:519 O.cuniculus:51

O84444              	100.00%		G1T5N5              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for G1T5N5 as seed ortholog is 82%.

Group of orthologs #8. Best score 516 bits
Score difference with first non-orthologous sequence - C.trachomatis:516 O.cuniculus:516

O84057              	100.00%		G1SHI9              	100.00%
                    	       		G1T650              	67.71%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for G1SHI9 as seed ortholog is 100%.

Group of orthologs #9. Best score 502 bits
Score difference with first non-orthologous sequence - C.trachomatis:502 O.cuniculus:312

O84304              	100.00%		G1TWP4              	100.00%
                    	       		G1U8N0              	19.86%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for G1TWP4 as seed ortholog is 99%.

Group of orthologs #10. Best score 499 bits
Score difference with first non-orthologous sequence - C.trachomatis:499 O.cuniculus:499

O84834              	100.00%		G1T5A0              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for G1T5A0 as seed ortholog is 100%.

Group of orthologs #11. Best score 495 bits
Score difference with first non-orthologous sequence - C.trachomatis:495 O.cuniculus:495

O84066              	100.00%		G1T7Z0              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for G1T7Z0 as seed ortholog is 100%.

Group of orthologs #12. Best score 487 bits
Score difference with first non-orthologous sequence - C.trachomatis:487 O.cuniculus:487

O84585              	100.00%		G1SZW3              	100.00%
                    	       		G1SDU6              	58.08%
                    	       		G1T1Y8              	25.46%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for G1SZW3 as seed ortholog is 100%.

Group of orthologs #13. Best score 476 bits
Score difference with first non-orthologous sequence - C.trachomatis:476 O.cuniculus:476

O84863              	100.00%		G1SXZ7              	100.00%
                    	       		G1TVI3              	97.34%
                    	       		G1TUE0              	79.85%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for G1SXZ7 as seed ortholog is 100%.

Group of orthologs #14. Best score 468 bits
Score difference with first non-orthologous sequence - C.trachomatis:468 O.cuniculus:468

O84348              	100.00%		G1SSR3              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for G1SSR3 as seed ortholog is 100%.

Group of orthologs #15. Best score 460 bits
Score difference with first non-orthologous sequence - C.trachomatis:460 O.cuniculus:460

P0CD73              	100.00%		G1SV87              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for G1SV87 as seed ortholog is 100%.

Group of orthologs #16. Best score 450 bits
Score difference with first non-orthologous sequence - C.trachomatis:450 O.cuniculus:292

P0CD71              	100.00%		G1SI29              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for G1SI29 as seed ortholog is 100%.

Group of orthologs #17. Best score 442 bits
Score difference with first non-orthologous sequence - C.trachomatis:442 O.cuniculus:337

O84211              	100.00%		G1SGI3              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for G1SGI3 as seed ortholog is 100%.

Group of orthologs #18. Best score 440 bits
Score difference with first non-orthologous sequence - C.trachomatis:440 O.cuniculus:440

O84848              	100.00%		G1T6T7              	100.00%
                    	       		G1TAC3              	49.16%
                    	       		G1SZI0              	6.09%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for G1T6T7 as seed ortholog is 100%.

Group of orthologs #19. Best score 438 bits
Score difference with first non-orthologous sequence - C.trachomatis:438 O.cuniculus:230

O84460              	100.00%		G1TA11              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for G1TA11 as seed ortholog is 100%.

Group of orthologs #20. Best score 436 bits
Score difference with first non-orthologous sequence - C.trachomatis:436 O.cuniculus:377

O84754              	100.00%		G1SW24              	100.00%
                    	       		G1U1K5              	20.32%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for G1SW24 as seed ortholog is 100%.

Group of orthologs #21. Best score 423 bits
Score difference with first non-orthologous sequence - C.trachomatis:423 O.cuniculus:423

O84126              	100.00%		G1TD99              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for G1TD99 as seed ortholog is 100%.

Group of orthologs #22. Best score 415 bits
Score difference with first non-orthologous sequence - C.trachomatis:415 O.cuniculus:265

O84546              	100.00%		G1STX8              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for G1STX8 as seed ortholog is 100%.

Group of orthologs #23. Best score 413 bits
Score difference with first non-orthologous sequence - C.trachomatis:413 O.cuniculus:413

O84849              	100.00%		G1SRY1              	100.00%
Bootstrap support for O84849 as seed ortholog is 100%.
Bootstrap support for G1SRY1 as seed ortholog is 100%.

Group of orthologs #24. Best score 409 bits
Score difference with first non-orthologous sequence - C.trachomatis:409 O.cuniculus:409

Q59321              	100.00%		G1SI74              	100.00%
                    	       		G1TBC8              	54.94%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for G1SI74 as seed ortholog is 100%.

Group of orthologs #25. Best score 376 bits
Score difference with first non-orthologous sequence - C.trachomatis:376 O.cuniculus:271

O84591              	100.00%		G1SK04              	100.00%
                    	       		G1SYJ4              	75.56%
                    	       		P25704              	73.51%
                    	       		G1U6X0              	49.49%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for G1SK04 as seed ortholog is 100%.

Group of orthologs #26. Best score 374 bits
Score difference with first non-orthologous sequence - C.trachomatis:374 O.cuniculus:374

O84310              	100.00%		G1SR29              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for G1SR29 as seed ortholog is 100%.

Group of orthologs #27. Best score 371 bits
Score difference with first non-orthologous sequence - C.trachomatis:371 O.cuniculus:371

O84831              	100.00%		G1T0I5              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for G1T0I5 as seed ortholog is 100%.

Group of orthologs #28. Best score 366 bits
Score difference with first non-orthologous sequence - C.trachomatis:366 O.cuniculus:366

P0CE13              	100.00%		G1T091              	100.00%
                    	       		G1TJG6              	21.83%
                    	       		G1TYG1              	21.18%
                    	       		P46406              	21.18%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for G1T091 as seed ortholog is 100%.

Group of orthologs #29. Best score 338 bits
Score difference with first non-orthologous sequence - C.trachomatis:338 O.cuniculus:338

O84829              	100.00%		G1SKD9              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for G1SKD9 as seed ortholog is 100%.

Group of orthologs #30. Best score 326 bits
Score difference with first non-orthologous sequence - C.trachomatis:326 O.cuniculus:326

O84006              	100.00%		G1TPF3              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for G1TPF3 as seed ortholog is 100%.

Group of orthologs #31. Best score 321 bits
Score difference with first non-orthologous sequence - C.trachomatis:321 O.cuniculus:246

O84786              	100.00%		G1T9P6              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for G1T9P6 as seed ortholog is 100%.

Group of orthologs #32. Best score 317 bits
Score difference with first non-orthologous sequence - C.trachomatis:317 O.cuniculus:217

O84098              	100.00%		G1SK29              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for G1SK29 as seed ortholog is 99%.

Group of orthologs #33. Best score 316 bits
Score difference with first non-orthologous sequence - C.trachomatis:316 O.cuniculus:105

O84248              	100.00%		G1T9V1              	100.00%
                    	       		G1U529              	33.83%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for G1T9V1 as seed ortholog is 99%.

Group of orthologs #34. Best score 311 bits
Score difference with first non-orthologous sequence - C.trachomatis:311 O.cuniculus:311

P0CD78              	100.00%		G1SNJ9              	100.00%
                    	       		G1TLE3              	84.66%
                    	       		G1T7Z6              	83.69%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for G1SNJ9 as seed ortholog is 100%.

Group of orthologs #35. Best score 311 bits
Score difference with first non-orthologous sequence - C.trachomatis:311 O.cuniculus:156

O84035              	100.00%		G1SSX5              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for G1SSX5 as seed ortholog is 99%.

Group of orthologs #36. Best score 309 bits
Score difference with first non-orthologous sequence - C.trachomatis:309 O.cuniculus:309

P0CE09              	100.00%		G1TBH1              	100.00%
                    	       		G1SEA1              	22.21%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for G1TBH1 as seed ortholog is 100%.

Group of orthologs #37. Best score 305 bits
Score difference with first non-orthologous sequence - C.trachomatis:305 O.cuniculus:305

O84823              	100.00%		G1TBY9              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for G1TBY9 as seed ortholog is 100%.

Group of orthologs #38. Best score 303 bits
Score difference with first non-orthologous sequence - C.trachomatis:303 O.cuniculus:303

O84775              	100.00%		G1T9A9              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for G1T9A9 as seed ortholog is 100%.

Group of orthologs #39. Best score 300 bits
Score difference with first non-orthologous sequence - C.trachomatis:300 O.cuniculus:140

O84561              	100.00%		G1T7V5              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for G1T7V5 as seed ortholog is 99%.

Group of orthologs #40. Best score 299 bits
Score difference with first non-orthologous sequence - C.trachomatis:299 O.cuniculus:299

P0CE21              	100.00%		P11974              	100.00%
                    	       		G1T8G9              	58.29%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for P11974 as seed ortholog is 100%.

Group of orthologs #41. Best score 296 bits
Score difference with first non-orthologous sequence - C.trachomatis:296 O.cuniculus:296

O84698              	100.00%		G1SG34              	100.00%
                    	       		G1T9E6              	42.22%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for G1SG34 as seed ortholog is 100%.

Group of orthologs #42. Best score 287 bits
Score difference with first non-orthologous sequence - C.trachomatis:287 O.cuniculus:287

O84451              	100.00%		G1SV59              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for G1SV59 as seed ortholog is 100%.

Group of orthologs #43. Best score 284 bits
Score difference with first non-orthologous sequence - C.trachomatis:284 O.cuniculus:44

O84797              	100.00%		G1TCM7              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for G1TCM7 as seed ortholog is 72%.
Alternative seed ortholog is G1TB80 (44 bits away from this cluster)

Group of orthologs #44. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 O.cuniculus:279

O84711              	100.00%		G1SSR8              	100.00%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for G1SSR8 as seed ortholog is 100%.

Group of orthologs #45. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 O.cuniculus:278

O84316              	100.00%		G1TTQ1              	100.00%
                    	       		G1T3C7              	11.74%
                    	       		G1SYP7              	7.07%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for G1TTQ1 as seed ortholog is 100%.

Group of orthologs #46. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 O.cuniculus:152

O84249              	100.00%		G1T9S4              	100.00%
Bootstrap support for O84249 as seed ortholog is 99%.
Bootstrap support for G1T9S4 as seed ortholog is 99%.

Group of orthologs #47. Best score 268 bits
Score difference with first non-orthologous sequence - C.trachomatis:268 O.cuniculus:110

O84188              	100.00%		G1STZ4              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for G1STZ4 as seed ortholog is 99%.

Group of orthologs #48. Best score 265 bits
Score difference with first non-orthologous sequence - C.trachomatis:265 O.cuniculus:265

O84094              	100.00%		G1SJZ4              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for G1SJZ4 as seed ortholog is 100%.

Group of orthologs #49. Best score 263 bits
Score difference with first non-orthologous sequence - C.trachomatis:263 O.cuniculus:263

P36431              	100.00%		G1SEL9              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for G1SEL9 as seed ortholog is 100%.

Group of orthologs #50. Best score 259 bits
Score difference with first non-orthologous sequence - C.trachomatis:259 O.cuniculus:259

O84439              	100.00%		P07511              	100.00%
                    	       		P14519              	49.10%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for P07511 as seed ortholog is 100%.

Group of orthologs #51. Best score 256 bits
Score difference with first non-orthologous sequence - C.trachomatis:256 O.cuniculus:128

O84642              	100.00%		G1SKL2              	100.00%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for G1SKL2 as seed ortholog is 99%.

Group of orthologs #52. Best score 256 bits
Score difference with first non-orthologous sequence - C.trachomatis:256 O.cuniculus:172

O84381              	100.00%		G1SQG5              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for G1SQG5 as seed ortholog is 99%.

Group of orthologs #53. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:255 O.cuniculus:255

P0CD72              	100.00%		Q9N1E2              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for Q9N1E2 as seed ortholog is 100%.

Group of orthologs #54. Best score 254 bits
Score difference with first non-orthologous sequence - C.trachomatis:254 O.cuniculus:160

O84828              	100.00%		G1T361              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for G1T361 as seed ortholog is 100%.

Group of orthologs #55. Best score 251 bits
Score difference with first non-orthologous sequence - C.trachomatis:251 O.cuniculus:251

O84289              	100.00%		G1U8N3              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for G1U8N3 as seed ortholog is 100%.

Group of orthologs #56. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 O.cuniculus:250

O84026              	100.00%		G1SCI1              	100.00%
                    	       		G1U8U4              	80.72%
                    	       		G1TY75              	14.71%
Bootstrap support for O84026 as seed ortholog is 97%.
Bootstrap support for G1SCI1 as seed ortholog is 100%.

Group of orthologs #57. Best score 249 bits
Score difference with first non-orthologous sequence - C.trachomatis:249 O.cuniculus:183

O84309              	100.00%		G1SEJ4              	100.00%
                    	       		G1TQ38              	75.62%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for G1SEJ4 as seed ortholog is 100%.

Group of orthologs #58. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:248 O.cuniculus:136

O84548              	100.00%		G1TDC2              	100.00%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for G1TDC2 as seed ortholog is 99%.

Group of orthologs #59. Best score 245 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 O.cuniculus:121

O84058              	100.00%		G1T9T5              	100.00%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for G1T9T5 as seed ortholog is 99%.

Group of orthologs #60. Best score 241 bits
Score difference with first non-orthologous sequence - C.trachomatis:241 O.cuniculus:241

O84360              	100.00%		G1SI64              	100.00%
Bootstrap support for O84360 as seed ortholog is 100%.
Bootstrap support for G1SI64 as seed ortholog is 100%.

Group of orthologs #61. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 O.cuniculus:240

O84297              	100.00%		G1SPH6              	100.00%
                    	       		G1T616              	49.90%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for G1SPH6 as seed ortholog is 100%.

Group of orthologs #62. Best score 239 bits
Score difference with first non-orthologous sequence - C.trachomatis:239 O.cuniculus:144

O84352              	100.00%		G1SGV5              	100.00%
                    	       		G1SM23              	13.74%
                    	       		G1SCW7              	11.65%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for G1SGV5 as seed ortholog is 99%.

Group of orthologs #63. Best score 239 bits
Score difference with first non-orthologous sequence - C.trachomatis:239 O.cuniculus:54

O84423              	100.00%		G1SNL3              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for G1SNL3 as seed ortholog is 95%.

Group of orthologs #64. Best score 238 bits
Score difference with first non-orthologous sequence - C.trachomatis:238 O.cuniculus:238

O84007              	100.00%		G1TCJ4              	100.00%
Bootstrap support for O84007 as seed ortholog is 100%.
Bootstrap support for G1TCJ4 as seed ortholog is 100%.

Group of orthologs #65. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 O.cuniculus:102

O84049              	100.00%		G1SFP0              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for G1SFP0 as seed ortholog is 99%.

Group of orthologs #66. Best score 227 bits
Score difference with first non-orthologous sequence - C.trachomatis:227 O.cuniculus:227

O84081              	100.00%		G1SNF2              	100.00%
                    	       		G1SXM1              	50.43%
                    	       		G1SP76              	40.95%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for G1SNF2 as seed ortholog is 100%.

Group of orthologs #67. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 O.cuniculus:225

O84562              	100.00%		G1SWJ3              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for G1SWJ3 as seed ortholog is 100%.

Group of orthologs #68. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 O.cuniculus:124

O84296              	100.00%		P41982              	100.00%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for P41982 as seed ortholog is 100%.

Group of orthologs #69. Best score 224 bits
Score difference with first non-orthologous sequence - C.trachomatis:224 O.cuniculus:33

O84345              	100.00%		G1SLS1              	100.00%
                    	       		G1TQ02              	93.01%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for G1SLS1 as seed ortholog is 86%.

Group of orthologs #70. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 O.cuniculus:223

O84028              	100.00%		G1STX4              	100.00%
Bootstrap support for O84028 as seed ortholog is 99%.
Bootstrap support for G1STX4 as seed ortholog is 100%.

Group of orthologs #71. Best score 222 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 O.cuniculus:222

O84406              	100.00%		G1T590              	100.00%
                    	       		G1TZY1              	54.97%
                    	       		P31597              	30.72%
                    	       		G1SDX0              	28.98%
                    	       		G1SHU2              	27.02%
                    	       		O19105              	19.86%
                    	       		G1T525              	16.17%
                    	       		G1SWM3              	12.36%
                    	       		G1T017              	10.74%
Bootstrap support for O84406 as seed ortholog is 99%.
Bootstrap support for G1T590 as seed ortholog is 100%.

Group of orthologs #72. Best score 217 bits
Score difference with first non-orthologous sequence - C.trachomatis:217 O.cuniculus:217

O84065              	100.00%		G1SCF6              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for G1SCF6 as seed ortholog is 100%.

Group of orthologs #73. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 O.cuniculus:212

O84613              	100.00%		G1SJ42              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for G1SJ42 as seed ortholog is 100%.

Group of orthologs #74. Best score 204 bits
Score difference with first non-orthologous sequence - C.trachomatis:204 O.cuniculus:204

O84812              	100.00%		G1SIE8              	100.00%
                    	       		G1U5W5              	18.09%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for G1SIE8 as seed ortholog is 100%.

Group of orthologs #75. Best score 199 bits
Score difference with first non-orthologous sequence - C.trachomatis:199 O.cuniculus:199

O84266              	100.00%		G1SSN0              	100.00%
                    	       		G1SVN5              	19.36%
                    	       		G1SR10              	13.83%
                    	       		G1SGW1              	10.54%
                    	       		G1TJ41              	8.12%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for G1SSN0 as seed ortholog is 100%.

Group of orthologs #76. Best score 199 bits
Score difference with first non-orthologous sequence - C.trachomatis:199 O.cuniculus:199

O84638              	100.00%		G1SPT0              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for G1SPT0 as seed ortholog is 100%.

Group of orthologs #77. Best score 193 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 O.cuniculus:193

O84859              	100.00%		G1SLE6              	100.00%
                    	       		G1TQ81              	7.81%
Bootstrap support for O84859 as seed ortholog is 99%.
Bootstrap support for G1SLE6 as seed ortholog is 100%.

Group of orthologs #78. Best score 192 bits
Score difference with first non-orthologous sequence - C.trachomatis:192 O.cuniculus:192

O84874              	100.00%		G1SPY1              	100.00%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for G1SPY1 as seed ortholog is 100%.

Group of orthologs #79. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 O.cuniculus:75

O84247              	100.00%		G1SHS1              	100.00%
                    	       		G1T813              	85.13%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for G1SHS1 as seed ortholog is 98%.

Group of orthologs #80. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 O.cuniculus:188

O84787              	100.00%		G1TLA8              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for G1TLA8 as seed ortholog is 100%.

Group of orthologs #81. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 O.cuniculus:184

O84734              	100.00%		G1SDU8              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for G1SDU8 as seed ortholog is 100%.

Group of orthologs #82. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 O.cuniculus:183

O84402              	100.00%		G1SRG3              	100.00%
                    	       		G1SH20              	17.80%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for G1SRG3 as seed ortholog is 100%.

Group of orthologs #83. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 O.cuniculus:183

O84596              	100.00%		G1U7G6              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for G1U7G6 as seed ortholog is 100%.

Group of orthologs #84. Best score 181 bits
Score difference with first non-orthologous sequence - C.trachomatis:181 O.cuniculus:26

P38004              	100.00%		G1SR07              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for G1SR07 as seed ortholog is 77%.

Group of orthologs #85. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 O.cuniculus:100

O84608              	100.00%		G1SMI6              	100.00%
                    	       		G1SQ02              	28.57%
                    	       		G1TDH4              	25.34%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for G1SMI6 as seed ortholog is 99%.

Group of orthologs #86. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 O.cuniculus:180

O84332              	100.00%		G1TS29              	100.00%
                    	       		P00939              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for G1TS29 as seed ortholog is 100%.
Bootstrap support for P00939 as seed ortholog is 100%.

Group of orthologs #87. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 O.cuniculus:178

O84234              	100.00%		G1SE03              	100.00%
                    	       		G1T8K9              	31.71%
                    	       		G1TTD2              	31.71%
                    	       		G1SQY0              	29.85%
                    	       		G1TDF9              	24.21%
                    	       		G1SCD9              	23.93%
                    	       		G1SEU3              	23.93%
                    	       		P48055              	23.80%
                    	       		G1SFT3              	23.66%
                    	       		P31661              	22.28%
                    	       		G1TNN7              	17.68%
                    	       		G1T6N5              	16.78%
                    	       		G1SLB4              	12.65%
                    	       		G1TZB6              	11.55%
                    	       		G1SHJ1              	9.08%
                    	       		G1U649              	7.91%
                    	       		G1U2G5              	6.19%
Bootstrap support for O84234 as seed ortholog is 100%.
Bootstrap support for G1SE03 as seed ortholog is 100%.

Group of orthologs #88. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 O.cuniculus:176

O84755              	100.00%		G1TAH7              	100.00%
                    	       		G1TPB0              	54.54%
                    	       		G1SE97              	39.26%
Bootstrap support for O84755 as seed ortholog is 82%.
Bootstrap support for G1TAH7 as seed ortholog is 100%.

Group of orthologs #89. Best score 174 bits
Score difference with first non-orthologous sequence - C.trachomatis:174 O.cuniculus:174

P18584              	100.00%		G1T5H0              	100.00%
                    	       		G1SCJ7              	45.39%
                    	       		G1T9C8              	30.51%
Bootstrap support for P18584 as seed ortholog is 100%.
Bootstrap support for G1T5H0 as seed ortholog is 100%.

Group of orthologs #90. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 O.cuniculus:170

O84274              	100.00%		G1T736              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for G1T736 as seed ortholog is 100%.

Group of orthologs #91. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:168 O.cuniculus:36

O84676              	100.00%		G1SQA8              	100.00%
O84722              	11.82%		G1U6C7              	89.42%
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for G1SQA8 as seed ortholog is 82%.

Group of orthologs #92. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 O.cuniculus:114

O84456              	100.00%		G1TCS2              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for G1TCS2 as seed ortholog is 99%.

Group of orthologs #93. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:37 O.cuniculus:166

O84712              	100.00%		G1U8K3              	100.00%
Bootstrap support for O84712 as seed ortholog is 95%.
Bootstrap support for G1U8K3 as seed ortholog is 100%.

Group of orthologs #94. Best score 162 bits
Score difference with first non-orthologous sequence - C.trachomatis:162 O.cuniculus:162

O84632              	100.00%		G1T683              	100.00%
Bootstrap support for O84632 as seed ortholog is 100%.
Bootstrap support for G1T683 as seed ortholog is 100%.

Group of orthologs #95. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 O.cuniculus:161

O84055              	100.00%		G1SI45              	100.00%
Bootstrap support for O84055 as seed ortholog is 99%.
Bootstrap support for G1SI45 as seed ortholog is 100%.

Group of orthologs #96. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:38 O.cuniculus:153

O84260              	100.00%		G1TCX0              	100.00%
                    	       		G1SIA4              	7.41%
Bootstrap support for O84260 as seed ortholog is 83%.
Bootstrap support for G1TCX0 as seed ortholog is 100%.

Group of orthologs #97. Best score 152 bits
Score difference with first non-orthologous sequence - C.trachomatis:152 O.cuniculus:152

O84196              	100.00%		G1TYU5              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for G1TYU5 as seed ortholog is 100%.

Group of orthologs #98. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 O.cuniculus:151

O84727              	100.00%		P07952              	100.00%
                    	       		G1U7S4              	37.53%
                    	       		G1SPF5              	26.77%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for P07952 as seed ortholog is 100%.

Group of orthologs #99. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 O.cuniculus:151

O84383              	100.00%		G1SUS2              	100.00%
Bootstrap support for O84383 as seed ortholog is 100%.
Bootstrap support for G1SUS2 as seed ortholog is 100%.

Group of orthologs #100. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 O.cuniculus:49

O84200              	100.00%		G1T3F5              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for G1T3F5 as seed ortholog is 90%.

Group of orthologs #101. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 O.cuniculus:151

O84720              	100.00%		G1T9R8              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for G1T9R8 as seed ortholog is 100%.

Group of orthologs #102. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 O.cuniculus:148

O84752              	100.00%		G1SL80              	100.00%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for G1SL80 as seed ortholog is 100%.

Group of orthologs #103. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 O.cuniculus:136

O84835              	100.00%		G1SVD2              	100.00%
                    	       		G1SPQ7              	68.06%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for G1SVD2 as seed ortholog is 100%.

Group of orthologs #104. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 O.cuniculus:136

O84123              	100.00%		G1TG27              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for G1TG27 as seed ortholog is 100%.

Group of orthologs #105. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 O.cuniculus:135

O84771              	100.00%		G1SGQ1              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for G1SGQ1 as seed ortholog is 100%.

Group of orthologs #106. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 O.cuniculus:132

O84732              	100.00%		G1SMV4              	100.00%
                    	       		G1SR77              	100.00%
                    	       		G1T853              	100.00%
                    	       		G1SHF6              	79.67%
                    	       		P20647              	74.39%
                    	       		Q00804              	73.20%
                    	       		P04191              	73.18%
                    	       		G1TS32              	61.65%
                    	       		G1TGY3              	59.49%
                    	       		G1U572              	45.74%
                    	       		G1TMQ8              	18.03%
                    	       		P27112              	12.91%
                    	       		G1TE72              	12.91%
                    	       		Q9N0Z6              	12.75%
                    	       		Q9TV52              	11.60%
                    	       		G1TQW7              	10.82%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for G1SMV4 as seed ortholog is 100%.
Bootstrap support for G1SR77 as seed ortholog is 100%.
Bootstrap support for G1T853 as seed ortholog is 100%.

Group of orthologs #107. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 O.cuniculus:80

O84589              	100.00%		G1T330              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for G1T330 as seed ortholog is 97%.

Group of orthologs #108. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 O.cuniculus:129

O84649              	100.00%		G1SQY7              	100.00%
                    	       		G1T303              	14.23%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for G1SQY7 as seed ortholog is 100%.

Group of orthologs #109. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 O.cuniculus:35

O84530              	100.00%		G1SFQ3              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for G1SFQ3 as seed ortholog is 87%.

Group of orthologs #110. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 O.cuniculus:125

O84492              	100.00%		G1SIV3              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for G1SIV3 as seed ortholog is 100%.

Group of orthologs #111. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 O.cuniculus:28

O84130              	100.00%		G1T188              	100.00%
                    	       		G1SYD2              	45.35%
                    	       		G1SG80              	15.92%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for G1T188 as seed ortholog is 78%.

Group of orthologs #112. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 O.cuniculus:123

O84241              	100.00%		G1TVH0              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for G1TVH0 as seed ortholog is 100%.

Group of orthologs #113. Best score 120 bits
Score difference with first non-orthologous sequence - C.trachomatis:120 O.cuniculus:120

O84391              	100.00%		G1T103              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for G1T103 as seed ortholog is 100%.

Group of orthologs #114. Best score 120 bits
Score difference with first non-orthologous sequence - C.trachomatis:120 O.cuniculus:120

O84033              	100.00%		G1TZ26              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for G1TZ26 as seed ortholog is 100%.

Group of orthologs #115. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 O.cuniculus:119

O84478              	100.00%		G1SHQ7              	100.00%
Bootstrap support for O84478 as seed ortholog is 100%.
Bootstrap support for G1SHQ7 as seed ortholog is 100%.

Group of orthologs #116. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 O.cuniculus:37

O84508              	100.00%		G1U9T4              	100.00%
                    	       		G1U7U3              	85.28%
                    	       		G1TK81              	35.53%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for G1U9T4 as seed ortholog is 95%.

Group of orthologs #117. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 O.cuniculus:55

O84096              	100.00%		G1SX93              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for G1SX93 as seed ortholog is 95%.

Group of orthologs #118. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 O.cuniculus:114

O84710              	100.00%		G1SVF9              	100.00%
O84415              	6.17%		
Bootstrap support for O84710 as seed ortholog is 100%.
Bootstrap support for G1SVF9 as seed ortholog is 100%.

Group of orthologs #119. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 O.cuniculus:111

O84864              	100.00%		G1TZ54              	100.00%
                    	       		G1T3S0              	5.94%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for G1TZ54 as seed ortholog is 100%.

Group of orthologs #120. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 O.cuniculus:22

O84358              	100.00%		G1SZD1              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for G1SZD1 as seed ortholog is 73%.
Alternative seed ortholog is G1T2Q1 (22 bits away from this cluster)

Group of orthologs #121. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 O.cuniculus:110

O84463              	100.00%		G1T714              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for G1T714 as seed ortholog is 100%.

Group of orthologs #122. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 O.cuniculus:33

O84599              	100.00%		G1SMJ3              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for G1SMJ3 as seed ortholog is 80%.

Group of orthologs #123. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 O.cuniculus:63

O84215              	100.00%		G1TUG7              	100.00%
                    	       		G1SGI2              	78.74%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for G1TUG7 as seed ortholog is 98%.

Group of orthologs #124. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 O.cuniculus:104

O84212              	100.00%		G1U5X1              	100.00%
                    	       		G1T9T6              	16.08%
                    	       		G1SJ91              	13.59%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for G1U5X1 as seed ortholog is 100%.

Group of orthologs #125. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 O.cuniculus:55

P66370              	100.00%		G1SDV0              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for G1SDV0 as seed ortholog is 99%.

Group of orthologs #126. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 O.cuniculus:102

O84851              	100.00%		G1SW59              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for G1SW59 as seed ortholog is 100%.

Group of orthologs #127. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 O.cuniculus:102

O84301              	100.00%		G1T8V6              	100.00%
Bootstrap support for O84301 as seed ortholog is 100%.
Bootstrap support for G1T8V6 as seed ortholog is 100%.

Group of orthologs #128. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 O.cuniculus:101

P55137              	100.00%		G1T2A6              	100.00%
                    	       		G1TP41              	20.21%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for G1T2A6 as seed ortholog is 100%.

Group of orthologs #129. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 O.cuniculus:101

O84843              	100.00%		G1T6U4              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for G1T6U4 as seed ortholog is 100%.

Group of orthologs #130. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 O.cuniculus:98

O84442              	100.00%		O19114              	100.00%
                    	       		P00389              	12.59%
                    	       		G1SK30              	7.86%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for O19114 as seed ortholog is 100%.

Group of orthologs #131. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 O.cuniculus:97

O84390              	100.00%		G1U3V0              	100.00%
                    	       		G1SR26              	63.52%
                    	       		P80912              	27.46%
                    	       		G1SV28              	25.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for G1U3V0 as seed ortholog is 100%.

Group of orthologs #132. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 O.cuniculus:51

P0CE06              	100.00%		G1TMZ2              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for G1TMZ2 as seed ortholog is 96%.

Group of orthologs #133. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 O.cuniculus:28

P0CE03              	100.00%		G1TW17              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for G1TW17 as seed ortholog is 94%.

Group of orthologs #134. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 O.cuniculus:96

O84782              	100.00%		G1TNV7              	100.00%
                    	       		G1T5R2              	17.85%
                    	       		G1SVD6              	15.40%
                    	       		G1SF59              	12.53%
                    	       		G1SFF5              	11.31%
                    	       		G1SUF4              	5.86%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for G1TNV7 as seed ortholog is 100%.

Group of orthologs #135. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 O.cuniculus:94

P0CD79              	100.00%		G1TUE7              	100.00%
Bootstrap support for P0CD79 as seed ortholog is 100%.
Bootstrap support for G1TUE7 as seed ortholog is 100%.

Group of orthologs #136. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 O.cuniculus:92

O84719              	100.00%		P08507              	100.00%
                    	       		G1TVT8              	83.06%
                    	       		G1TRJ6              	47.56%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for P08507 as seed ortholog is 100%.

Group of orthologs #137. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 O.cuniculus:92

O84750              	100.00%		G1SHH1              	100.00%
Bootstrap support for O84750 as seed ortholog is 100%.
Bootstrap support for G1SHH1 as seed ortholog is 100%.

Group of orthologs #138. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 O.cuniculus:91

O84350              	100.00%		G1SXC7              	100.00%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for G1SXC7 as seed ortholog is 100%.

Group of orthologs #139. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 O.cuniculus:41

O84435              	100.00%		G1T897              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for G1T897 as seed ortholog is 87%.

Group of orthologs #140. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 O.cuniculus:87

O84321              	100.00%		G1TR26              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for G1TR26 as seed ortholog is 100%.

Group of orthologs #141. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 O.cuniculus:86

O84533              	100.00%		G1SIP9              	100.00%
Bootstrap support for O84533 as seed ortholog is 100%.
Bootstrap support for G1SIP9 as seed ortholog is 100%.

Group of orthologs #142. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 O.cuniculus:86

O84806              	100.00%		G1U0S4              	100.00%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for G1U0S4 as seed ortholog is 100%.

Group of orthologs #143. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 O.cuniculus:85

O84658              	100.00%		G1SNR1              	100.00%
Bootstrap support for O84658 as seed ortholog is 100%.
Bootstrap support for G1SNR1 as seed ortholog is 100%.

Group of orthologs #144. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 O.cuniculus:81

O84535              	100.00%		G1TME1              	100.00%
Bootstrap support for O84535 as seed ortholog is 100%.
Bootstrap support for G1TME1 as seed ortholog is 100%.

Group of orthologs #145. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 O.cuniculus:81

O84468              	100.00%		G1U4Y8              	100.00%
Bootstrap support for O84468 as seed ortholog is 100%.
Bootstrap support for G1U4Y8 as seed ortholog is 100%.

Group of orthologs #146. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 O.cuniculus:80

O84547              	100.00%		G1SLD6              	100.00%
                    	       		G1SLE1              	70.78%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for G1SLD6 as seed ortholog is 100%.

Group of orthologs #147. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 O.cuniculus:79

O84294              	100.00%		G1SKK1              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for G1SKK1 as seed ortholog is 100%.

Group of orthologs #148. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 O.cuniculus:79

O84499              	100.00%		G1SRY7              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for G1SRY7 as seed ortholog is 100%.

Group of orthologs #149. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 O.cuniculus:79

O84686              	100.00%		G1T3G8              	100.00%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for G1T3G8 as seed ortholog is 100%.

Group of orthologs #150. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 O.cuniculus:77

O84611              	100.00%		G1SL03              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for G1SL03 as seed ortholog is 100%.

Group of orthologs #151. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 O.cuniculus:11

O84544              	100.00%		G1SQV8              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for G1SQV8 as seed ortholog is 73%.
Alternative seed ortholog is G1SJZ9 (11 bits away from this cluster)

Group of orthologs #152. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 O.cuniculus:75

O84650              	100.00%		G1T425              	100.00%
                    	       		G1SYF8              	7.99%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for G1T425 as seed ortholog is 100%.

Group of orthologs #153. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 O.cuniculus:74

O84792              	100.00%		G1TV25              	100.00%
                    	       		G1U3I0              	83.33%
Bootstrap support for O84792 as seed ortholog is 100%.
Bootstrap support for G1TV25 as seed ortholog is 100%.

Group of orthologs #154. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 O.cuniculus:74

O84469              	100.00%		G1SLV6              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for G1SLV6 as seed ortholog is 100%.

Group of orthologs #155. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 O.cuniculus:74

O84027              	100.00%		G1SNN3              	100.00%
Bootstrap support for O84027 as seed ortholog is 100%.
Bootstrap support for G1SNN3 as seed ortholog is 100%.

Group of orthologs #156. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 O.cuniculus:32

O84781              	100.00%		G1SK09              	100.00%
                    	       		B7NZK5              	59.19%
                    	       		G1T8H1              	19.43%
                    	       		G1SN06              	18.00%
                    	       		G1TJB7              	7.13%
                    	       		G1SYQ7              	6.90%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for G1SK09 as seed ortholog is 77%.

Group of orthologs #157. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 O.cuniculus:73

O84338              	100.00%		G1TNA6              	100.00%
                    	       		G1SZ58              	19.81%
                    	       		G1SN08              	18.41%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for G1TNA6 as seed ortholog is 100%.

Group of orthologs #158. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 O.cuniculus:73

O84139              	100.00%		G1SNT6              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for G1SNT6 as seed ortholog is 100%.

Group of orthologs #159. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 O.cuniculus:73

O84366              	100.00%		G1STT8              	100.00%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for G1STT8 as seed ortholog is 100%.

Group of orthologs #160. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 O.cuniculus:73

O84684              	100.00%		G1SVC4              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for G1SVC4 as seed ortholog is 100%.

Group of orthologs #161. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 O.cuniculus:19

P0CD81              	100.00%		G1T6D1              	100.00%
                    	       		G1TPF6              	95.75%
                    	       		G1TTR9              	15.57%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for G1T6D1 as seed ortholog is 79%.

Group of orthologs #162. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 O.cuniculus:67

O84284              	100.00%		G1U7W7              	100.00%
                    	       		Q9N121              	100.00%
                    	       		G1TTR4              	93.99%
                    	       		G1TSF9              	90.16%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for G1U7W7 as seed ortholog is 100%.
Bootstrap support for Q9N121 as seed ortholog is 100%.

Group of orthologs #163. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 O.cuniculus:67

P36424              	100.00%		G1TAZ2              	100.00%
                    	       		G1TUB2              	91.39%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for G1TAZ2 as seed ortholog is 100%.

Group of orthologs #164. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 O.cuniculus:67

O84665              	100.00%		G1TMK5              	100.00%
O84108              	7.78%		
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for G1TMK5 as seed ortholog is 100%.

Group of orthologs #165. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 O.cuniculus:67

O84127              	100.00%		G1TB33              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for G1TB33 as seed ortholog is 100%.

Group of orthologs #166. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 O.cuniculus:66

P0C0Z8              	100.00%		G1SZ44              	100.00%
                    	       		G1TSX5              	100.00%
                    	       		G1U675              	95.59%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for G1SZ44 as seed ortholog is 100%.
Bootstrap support for G1TSX5 as seed ortholog is 100%.

Group of orthologs #167. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 O.cuniculus:65

P0CE04              	100.00%		G1SZI5              	100.00%
                    	       		G1TPG3              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for G1SZI5 as seed ortholog is 100%.
Bootstrap support for G1TPG3 as seed ortholog is 100%.

Group of orthologs #168. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 O.cuniculus:64

O84128              	100.00%		G1SGX4              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for G1SGX4 as seed ortholog is 100%.

Group of orthologs #169. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 O.cuniculus:64

O84320              	100.00%		G1SKJ4              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for G1SKJ4 as seed ortholog is 100%.

Group of orthologs #170. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 O.cuniculus:63

P26623              	100.00%		G1TLF0              	100.00%
                    	       		O46638              	98.23%
Bootstrap support for P26623 as seed ortholog is 100%.
Bootstrap support for G1TLF0 as seed ortholog is 100%.

Group of orthologs #171. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 O.cuniculus:62

P0CD84              	100.00%		G1SPI6              	100.00%
Bootstrap support for P0CD84 as seed ortholog is 100%.
Bootstrap support for G1SPI6 as seed ortholog is 100%.

Group of orthologs #172. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 O.cuniculus:61

O84218              	100.00%		G1U2W1              	100.00%
                    	       		G1TEV4              	51.24%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for G1U2W1 as seed ortholog is 100%.

Group of orthologs #173. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 O.cuniculus:10

O84822              	100.00%		P00949              	100.00%
                    	       		G1T6S2              	69.81%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for P00949 as seed ortholog is 60%.
Alternative seed ortholog is G1T004 (10 bits away from this cluster)

Group of orthologs #174. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 O.cuniculus:59

O84840              	100.00%		G1T1U3              	100.00%
Bootstrap support for O84840 as seed ortholog is 100%.
Bootstrap support for G1T1U3 as seed ortholog is 100%.

Group of orthologs #175. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 O.cuniculus:5

O84689              	100.00%		G1TUK9              	100.00%
Bootstrap support for O84689 as seed ortholog is 100%.
Bootstrap support for G1TUK9 as seed ortholog is 61%.
Alternative seed ortholog is G1SV17 (5 bits away from this cluster)

Group of orthologs #176. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 O.cuniculus:58

P0CD83              	100.00%		G1T5B0              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for G1T5B0 as seed ortholog is 100%.

Group of orthologs #177. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 O.cuniculus:57

O84379              	100.00%		Q9N1Q4              	100.00%
                    	       		G1SX81              	58.16%
                    	       		Q7YQK4              	46.63%
                    	       		G1SDX7              	41.45%
                    	       		G1SFV0              	35.48%
                    	       		G1SVB7              	32.75%
                    	       		Q9N1R6              	32.26%
                    	       		G1TIP9              	32.06%
                    	       		G1SP18              	31.96%
Bootstrap support for O84379 as seed ortholog is 100%.
Bootstrap support for Q9N1Q4 as seed ortholog is 100%.

Group of orthologs #178. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 O.cuniculus:57

P0A4C8              	100.00%		G1SWM1              	100.00%
                    	       		G1U2Z9              	91.70%
                    	       		G1TUT9              	88.65%
                    	       		G1U2S9              	69.43%
                    	       		G1TZR7              	42.79%
                    	       		G1TUF0              	39.30%
                    	       		G1TWW9              	38.21%
                    	       		G1TFA0              	37.55%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for G1SWM1 as seed ortholog is 100%.

Group of orthologs #179. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 O.cuniculus:1

O84633              	100.00%		G1SYI1              	100.00%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for G1SYI1 as seed ortholog is 51%.
Alternative seed ortholog is G1T5P4 (1 bits away from this cluster)

Group of orthologs #180. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 O.cuniculus:6

O84395              	100.00%		G1STX7              	100.00%
                    	       		G1TJ79              	100.00%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for G1STX7 as seed ortholog is 56%.
Alternative seed ortholog is G1T9U7 (6 bits away from this cluster)
Bootstrap support for G1TJ79 as seed ortholog is 56%.
Alternative seed ortholog is G1T9U7 (6 bits away from this cluster)

Group of orthologs #181. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 O.cuniculus:56

O84527              	100.00%		G1TNM3              	100.00%
                    	       		G1TG00              	92.49%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for G1TNM3 as seed ortholog is 100%.

Group of orthologs #182. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 O.cuniculus:56

P66480              	100.00%		G1U0Q2              	100.00%
                    	       		G1U6F3              	26.27%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for G1U0Q2 as seed ortholog is 100%.

Group of orthologs #183. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 O.cuniculus:56

P0CE02              	100.00%		G1SIZ2              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for G1SIZ2 as seed ortholog is 100%.

Group of orthologs #184. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 O.cuniculus:55

P66123              	100.00%		G1SM43              	100.00%
Bootstrap support for P66123 as seed ortholog is 100%.
Bootstrap support for G1SM43 as seed ortholog is 100%.

Group of orthologs #185. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 O.cuniculus:55

O84709              	100.00%		G1SP85              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for G1SP85 as seed ortholog is 100%.

Group of orthologs #186. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 O.cuniculus:54

O84029              	100.00%		G1TN80              	100.00%
                    	       		G1TL01              	94.25%
Bootstrap support for O84029 as seed ortholog is 100%.
Bootstrap support for G1TN80 as seed ortholog is 100%.

Group of orthologs #187. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 O.cuniculus:51

O84777              	100.00%		G1SPZ9              	100.00%
                    	       		G1U2B1              	87.20%
                    	       		G1TAP1              	65.16%
                    	       		G1TQS3              	55.91%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for G1SPZ9 as seed ortholog is 100%.

Group of orthologs #188. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 O.cuniculus:50

P0CD80              	100.00%		G1SMY5              	100.00%
                    	       		O77507              	45.22%
                    	       		G1SH65              	7.29%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for G1SMY5 as seed ortholog is 100%.

Group of orthologs #189. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 O.cuniculus:50

O84219              	100.00%		G1TIA0              	100.00%
                    	       		G1THM7              	93.12%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for G1TIA0 as seed ortholog is 100%.

Group of orthologs #190. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 O.cuniculus:50

O84618              	100.00%		G1SN91              	100.00%
Bootstrap support for O84618 as seed ortholog is 100%.
Bootstrap support for G1SN91 as seed ortholog is 100%.

Group of orthologs #191. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 O.cuniculus:48

O84655              	100.00%		P80405              	100.00%
                    	       		G1U250              	83.76%
Bootstrap support for O84655 as seed ortholog is 100%.
Bootstrap support for P80405 as seed ortholog is 100%.

Group of orthologs #192. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 O.cuniculus:48

O84776              	100.00%		G1SQK3              	100.00%
Bootstrap support for O84776 as seed ortholog is 100%.
Bootstrap support for G1SQK3 as seed ortholog is 100%.

Group of orthologs #193. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 O.cuniculus:43

O84151              	100.00%		G1SKT3              	100.00%
O84209              	6.63%		
Bootstrap support for O84151 as seed ortholog is 100%.
Bootstrap support for G1SKT3 as seed ortholog is 100%.

Group of orthologs #194. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 O.cuniculus:43

O84263              	100.00%		G1TTP9              	100.00%
O84541              	14.09%		
Bootstrap support for O84263 as seed ortholog is 100%.
Bootstrap support for G1TTP9 as seed ortholog is 100%.

Group of orthologs #195. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 O.cuniculus:42

O84496              	100.00%		G1SN09              	100.00%
                    	       		G1TVW5              	20.27%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for G1SN09 as seed ortholog is 100%.

Group of orthologs #196. Best score 41 bits
Score difference with first non-orthologous sequence - C.trachomatis:41 O.cuniculus:41

O84687              	100.00%		G1TQM9              	100.00%
                    	       		G1TGI6              	96.32%
                    	       		G1TJH8              	96.14%
                    	       		G1TLT8              	95.22%
                    	       		G1TT44              	95.04%
                    	       		G1TI36              	94.49%
                    	       		G1U1A8              	94.49%
                    	       		G1U673              	94.30%
                    	       		G1TWL4              	93.93%
                    	       		G1U1G8              	93.93%
                    	       		G1TNX6              	91.73%
                    	       		G1TWC1              	89.52%
                    	       		G1SDF8              	79.23%
                    	       		G1TKU4              	70.22%
                    	       		G1TUN1              	69.30%
                    	       		G1TJI7              	59.01%
                    	       		G1TVK8              	56.07%
                    	       		G1TGK0              	55.51%
                    	       		G1TPH8              	51.84%
                    	       		G1TXR5              	46.69%
                    	       		G1TVU2              	41.91%
                    	       		G1TX98              	36.95%
                    	       		G1TPP3              	35.85%
                    	       		G1TK78              	33.46%
                    	       		G1TAW1              	21.69%
                    	       		G1TW42              	20.40%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for G1TQM9 as seed ortholog is 100%.