###################################
201 groups of orthologs
207 in-paralogs from C.trachomatis
352 in-paralogs from L.chalumnae
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 931 bits
Score difference with first non-orthologous sequence - C.trachomatis:931 L.chalumnae:664

O84022              	100.00%		H3BI03              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for H3BI03 as seed ortholog is 100%.

Group of orthologs #2. Best score 706 bits
Score difference with first non-orthologous sequence - C.trachomatis:706 L.chalumnae:706

O84250              	100.00%		H3B242              	100.00%
                    	       		H3BGP1              	34.89%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for H3B242 as seed ortholog is 100%.

Group of orthologs #3. Best score 646 bits
Score difference with first non-orthologous sequence - C.trachomatis:646 L.chalumnae:87

P17821              	100.00%		H3AL07              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for H3AL07 as seed ortholog is 97%.

Group of orthologs #4. Best score 617 bits
Score difference with first non-orthologous sequence - C.trachomatis:617 L.chalumnae:617

O84716              	100.00%		H3BEX7              	100.00%
                    	       		H3AIG6              	40.62%
Bootstrap support for O84716 as seed ortholog is 100%.
Bootstrap support for H3BEX7 as seed ortholog is 100%.

Group of orthologs #5. Best score 595 bits
Score difference with first non-orthologous sequence - C.trachomatis:595 L.chalumnae:133

O84348              	100.00%		H3B5F1              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for H3B5F1 as seed ortholog is 99%.

Group of orthologs #6. Best score 589 bits
Score difference with first non-orthologous sequence - C.trachomatis:589 L.chalumnae:589

O84067              	100.00%		H3AGD0              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for H3AGD0 as seed ortholog is 100%.

Group of orthologs #7. Best score 531 bits
Score difference with first non-orthologous sequence - C.trachomatis:358 L.chalumnae:458

P0C0Z7              	100.00%		H3B646              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for H3B646 as seed ortholog is 100%.

Group of orthologs #8. Best score 530 bits
Score difference with first non-orthologous sequence - C.trachomatis:530 L.chalumnae:42

O84444              	100.00%		H3AWE2              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for H3AWE2 as seed ortholog is 78%.

Group of orthologs #9. Best score 505 bits
Score difference with first non-orthologous sequence - C.trachomatis:505 L.chalumnae:505

O84057              	100.00%		H3AQQ2              	100.00%
                    	       		H3BAN4              	30.89%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for H3AQQ2 as seed ortholog is 100%.

Group of orthologs #10. Best score 495 bits
Score difference with first non-orthologous sequence - C.trachomatis:495 L.chalumnae:495

O84066              	100.00%		H3AZU8              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for H3AZU8 as seed ortholog is 100%.

Group of orthologs #11. Best score 487 bits
Score difference with first non-orthologous sequence - C.trachomatis:487 L.chalumnae:487

O84585              	100.00%		H3BH99              	100.00%
                    	       		H3ALQ1              	61.98%
                    	       		H3AJS0              	25.11%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for H3BH99 as seed ortholog is 100%.

Group of orthologs #12. Best score 487 bits
Score difference with first non-orthologous sequence - C.trachomatis:487 L.chalumnae:487

O84834              	100.00%		H3AI30              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for H3AI30 as seed ortholog is 100%.

Group of orthologs #13. Best score 467 bits
Score difference with first non-orthologous sequence - C.trachomatis:467 L.chalumnae:321

P0CD71              	100.00%		H3AI71              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for H3AI71 as seed ortholog is 100%.

Group of orthologs #14. Best score 459 bits
Score difference with first non-orthologous sequence - C.trachomatis:459 L.chalumnae:224

O84848              	100.00%		H3A7G0              	100.00%
                    	       		H3A9W0              	52.45%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for H3A7G0 as seed ortholog is 100%.

Group of orthologs #15. Best score 445 bits
Score difference with first non-orthologous sequence - C.trachomatis:445 L.chalumnae:251

O84304              	100.00%		H3B5X3              	100.00%
                    	       		H2ZWJ3              	24.73%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for H3B5X3 as seed ortholog is 99%.

Group of orthologs #16. Best score 443 bits
Score difference with first non-orthologous sequence - C.trachomatis:443 L.chalumnae:236

O84754              	100.00%		H3A782              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for H3A782 as seed ortholog is 99%.

Group of orthologs #17. Best score 435 bits
Score difference with first non-orthologous sequence - C.trachomatis:435 L.chalumnae:308

O84211              	100.00%		H3A922              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for H3A922 as seed ortholog is 100%.

Group of orthologs #18. Best score 433 bits
Score difference with first non-orthologous sequence - C.trachomatis:433 L.chalumnae:433

O84460              	100.00%		H3B800              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for H3B800 as seed ortholog is 100%.

Group of orthologs #19. Best score 430 bits
Score difference with first non-orthologous sequence - C.trachomatis:430 L.chalumnae:430

O84126              	100.00%		H3AY53              	100.00%
                    	       		H3BFE7              	6.38%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for H3AY53 as seed ortholog is 100%.

Group of orthologs #20. Best score 415 bits
Score difference with first non-orthologous sequence - C.trachomatis:415 L.chalumnae:274

O84546              	100.00%		H3AUY3              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for H3AUY3 as seed ortholog is 100%.

Group of orthologs #21. Best score 388 bits
Score difference with first non-orthologous sequence - C.trachomatis:388 L.chalumnae:388

Q59321              	100.00%		H3B2Y2              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for H3B2Y2 as seed ortholog is 100%.

Group of orthologs #22. Best score 386 bits
Score difference with first non-orthologous sequence - C.trachomatis:386 L.chalumnae:386

O84849              	100.00%		H3ASD1              	100.00%
Bootstrap support for O84849 as seed ortholog is 100%.
Bootstrap support for H3ASD1 as seed ortholog is 100%.

Group of orthologs #23. Best score 383 bits
Score difference with first non-orthologous sequence - C.trachomatis:383 L.chalumnae:255

O84098              	100.00%		H3AEL6              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for H3AEL6 as seed ortholog is 100%.

Group of orthologs #24. Best score 377 bits
Score difference with first non-orthologous sequence - C.trachomatis:377 L.chalumnae:377

O84863              	100.00%		H3AFD7              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for H3AFD7 as seed ortholog is 100%.

Group of orthologs #25. Best score 377 bits
Score difference with first non-orthologous sequence - C.trachomatis:234 L.chalumnae:377

O84310              	100.00%		H3AJG5              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for H3AJG5 as seed ortholog is 100%.

Group of orthologs #26. Best score 374 bits
Score difference with first non-orthologous sequence - C.trachomatis:374 L.chalumnae:374

O84831              	100.00%		H3AWV3              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for H3AWV3 as seed ortholog is 100%.

Group of orthologs #27. Best score 370 bits
Score difference with first non-orthologous sequence - C.trachomatis:370 L.chalumnae:249

O84591              	100.00%		H3B7K3              	100.00%
                    	       		H3B528              	75.80%
                    	       		H2ZXR3              	53.60%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for H3B7K3 as seed ortholog is 100%.

Group of orthologs #28. Best score 354 bits
Score difference with first non-orthologous sequence - C.trachomatis:354 L.chalumnae:354

P0CE13              	100.00%		H3AST4              	100.00%
                    	       		H3A702              	32.70%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for H3AST4 as seed ortholog is 100%.

Group of orthologs #29. Best score 340 bits
Score difference with first non-orthologous sequence - C.trachomatis:340 L.chalumnae:340

O84829              	100.00%		H3A2G3              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for H3A2G3 as seed ortholog is 100%.

Group of orthologs #30. Best score 319 bits
Score difference with first non-orthologous sequence - C.trachomatis:319 L.chalumnae:240

O84786              	100.00%		H3B9Q4              	100.00%
                    	       		H3ACZ9              	70.44%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for H3B9Q4 as seed ortholog is 99%.

Group of orthologs #31. Best score 318 bits
Score difference with first non-orthologous sequence - C.trachomatis:318 L.chalumnae:175

O84248              	100.00%		H3AWF8              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for H3AWF8 as seed ortholog is 100%.

Group of orthologs #32. Best score 317 bits
Score difference with first non-orthologous sequence - C.trachomatis:317 L.chalumnae:317

O84823              	100.00%		H3BG06              	100.00%
                    	       		H3A6Q5              	62.73%
                    	       		H3B5P0              	60.95%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for H3BG06 as seed ortholog is 100%.

Group of orthologs #33. Best score 313 bits
Score difference with first non-orthologous sequence - C.trachomatis:313 L.chalumnae:313

P0CE09              	100.00%		H3A0Y3              	100.00%
                    	       		H3BBW8              	21.86%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for H3A0Y3 as seed ortholog is 100%.

Group of orthologs #34. Best score 310 bits
Score difference with first non-orthologous sequence - C.trachomatis:310 L.chalumnae:310

O84315              	100.00%		H3BAA1              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for H3BAA1 as seed ortholog is 100%.

Group of orthologs #35. Best score 309 bits
Score difference with first non-orthologous sequence - C.trachomatis:309 L.chalumnae:170

O84035              	100.00%		H3BHT6              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for H3BHT6 as seed ortholog is 99%.

Group of orthologs #36. Best score 308 bits
Score difference with first non-orthologous sequence - C.trachomatis:308 L.chalumnae:207

O84006              	100.00%		H3B7X9              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for H3B7X9 as seed ortholog is 99%.

Group of orthologs #37. Best score 305 bits
Score difference with first non-orthologous sequence - C.trachomatis:305 L.chalumnae:305

P0CE21              	100.00%		H3ATJ8              	100.00%
                    	       		H3AAG4              	65.54%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for H3ATJ8 as seed ortholog is 100%.

Group of orthologs #38. Best score 290 bits
Score difference with first non-orthologous sequence - C.trachomatis:290 L.chalumnae:290

P0CD78              	100.00%		H3AYK6              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for H3AYK6 as seed ortholog is 100%.

Group of orthologs #39. Best score 287 bits
Score difference with first non-orthologous sequence - C.trachomatis:287 L.chalumnae:287

O84775              	100.00%		H2ZXG4              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for H2ZXG4 as seed ortholog is 100%.

Group of orthologs #40. Best score 282 bits
Score difference with first non-orthologous sequence - C.trachomatis:282 L.chalumnae:282

O84698              	100.00%		H3ARM7              	100.00%
                    	       		H3ASB6              	42.84%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for H3ARM7 as seed ortholog is 100%.

Group of orthologs #41. Best score 282 bits
Score difference with first non-orthologous sequence - C.trachomatis:282 L.chalumnae:282

P0CD73              	100.00%		M3XI82              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for M3XI82 as seed ortholog is 100%.

Group of orthologs #42. Best score 281 bits
Score difference with first non-orthologous sequence - C.trachomatis:281 L.chalumnae:281

O84451              	100.00%		H2ZUH4              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for H2ZUH4 as seed ortholog is 100%.

Group of orthologs #43. Best score 281 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 L.chalumnae:164

O84249              	100.00%		H3B7A9              	100.00%
Bootstrap support for O84249 as seed ortholog is 99%.
Bootstrap support for H3B7A9 as seed ortholog is 99%.

Group of orthologs #44. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:275 L.chalumnae:166

O84381              	100.00%		H3BAH2              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for H3BAH2 as seed ortholog is 100%.

Group of orthologs #45. Best score 274 bits
Score difference with first non-orthologous sequence - C.trachomatis:274 L.chalumnae:274

O84360              	100.00%		H3AYV1              	100.00%
Bootstrap support for O84360 as seed ortholog is 100%.
Bootstrap support for H3AYV1 as seed ortholog is 100%.

Group of orthologs #46. Best score 274 bits
Score difference with first non-orthologous sequence - C.trachomatis:274 L.chalumnae:274

O84289              	100.00%		H3B105              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for H3B105 as seed ortholog is 100%.

Group of orthologs #47. Best score 273 bits
Score difference with first non-orthologous sequence - C.trachomatis:273 L.chalumnae:273

O84316              	100.00%		H3AVP5              	100.00%
                    	       		H3BGV0              	10.51%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for H3AVP5 as seed ortholog is 100%.

Group of orthologs #48. Best score 272 bits
Score difference with first non-orthologous sequence - C.trachomatis:272 L.chalumnae:25

O84797              	100.00%		H3B5L6              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for H3B5L6 as seed ortholog is 67%.
Alternative seed ortholog is M3XLC8 (25 bits away from this cluster)

Group of orthologs #49. Best score 263 bits
Score difference with first non-orthologous sequence - C.trachomatis:263 L.chalumnae:263

O84094              	100.00%		H3AEX7              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for H3AEX7 as seed ortholog is 100%.

Group of orthologs #50. Best score 261 bits
Score difference with first non-orthologous sequence - C.trachomatis:261 L.chalumnae:261

O84711              	100.00%		H3BC16              	100.00%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for H3BC16 as seed ortholog is 100%.

Group of orthologs #51. Best score 257 bits
Score difference with first non-orthologous sequence - C.trachomatis:257 L.chalumnae:257

P0CD72              	100.00%		H2ZU31              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for H2ZU31 as seed ortholog is 100%.

Group of orthologs #52. Best score 256 bits
Score difference with first non-orthologous sequence - C.trachomatis:256 L.chalumnae:256

P36431              	100.00%		H3A726              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for H3A726 as seed ortholog is 100%.

Group of orthologs #53. Best score 251 bits
Score difference with first non-orthologous sequence - C.trachomatis:251 L.chalumnae:251

O84439              	100.00%		H3BII8              	100.00%
                    	       		H3AND8              	36.15%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for H3BII8 as seed ortholog is 100%.

Group of orthologs #54. Best score 249 bits
Score difference with first non-orthologous sequence - C.trachomatis:249 L.chalumnae:249

O84787              	100.00%		H3B5Y6              	100.00%
                    	       		H3AIF6              	5.61%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for H3B5Y6 as seed ortholog is 100%.

Group of orthologs #55. Best score 245 bits
Score difference with first non-orthologous sequence - C.trachomatis:245 L.chalumnae:156

O84352              	100.00%		H3A7X9              	100.00%
                    	       		M3XI24              	12.90%
                    	       		H3A9D1              	10.90%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for H3A7X9 as seed ortholog is 99%.

Group of orthologs #56. Best score 241 bits
Score difference with first non-orthologous sequence - C.trachomatis:241 L.chalumnae:241

O84828              	100.00%		H3AZX5              	100.00%
                    	       		H3ALN3              	15.26%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for H3AZX5 as seed ortholog is 100%.

Group of orthologs #57. Best score 238 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 L.chalumnae:115

O84058              	100.00%		H3BI08              	100.00%
Bootstrap support for O84058 as seed ortholog is 98%.
Bootstrap support for H3BI08 as seed ortholog is 99%.

Group of orthologs #58. Best score 235 bits
Score difference with first non-orthologous sequence - C.trachomatis:235 L.chalumnae:235

O84562              	100.00%		H3ABS4              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for H3ABS4 as seed ortholog is 100%.

Group of orthologs #59. Best score 235 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 L.chalumnae:35

O84026              	100.00%		H3AQV2              	100.00%
Bootstrap support for O84026 as seed ortholog is 97%.
Bootstrap support for H3AQV2 as seed ortholog is 86%.

Group of orthologs #60. Best score 234 bits
Score difference with first non-orthologous sequence - C.trachomatis:234 L.chalumnae:234

O84188              	100.00%		M3XJT3              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for M3XJT3 as seed ortholog is 100%.

Group of orthologs #61. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 L.chalumnae:160

O84309              	100.00%		H3BB48              	100.00%
                    	       		H3A405              	61.17%
Bootstrap support for O84309 as seed ortholog is 99%.
Bootstrap support for H3BB48 as seed ortholog is 99%.

Group of orthologs #62. Best score 227 bits
Score difference with first non-orthologous sequence - C.trachomatis:130 L.chalumnae:117

O84406              	100.00%		H3AVK1              	100.00%
                    	       		H3B3T8              	54.12%
                    	       		H3AYB3              	28.38%
                    	       		H3AGN3              	28.03%
                    	       		H2ZXB4              	27.69%
                    	       		H3A4V9              	21.28%
                    	       		H2ZSX7              	18.42%
Bootstrap support for O84406 as seed ortholog is 99%.
Bootstrap support for H3AVK1 as seed ortholog is 99%.

Group of orthologs #63. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 L.chalumnae:80

O84049              	100.00%		H3B4N2              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for H3B4N2 as seed ortholog is 98%.

Group of orthologs #64. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 L.chalumnae:133

O84548              	100.00%		M3XKP9              	100.00%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for M3XKP9 as seed ortholog is 99%.

Group of orthologs #65. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 L.chalumnae:223

O84028              	100.00%		H3BEP0              	100.00%
Bootstrap support for O84028 as seed ortholog is 99%.
Bootstrap support for H3BEP0 as seed ortholog is 100%.

Group of orthologs #66. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 L.chalumnae:220

O84296              	100.00%		H3B6V8              	100.00%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for H3B6V8 as seed ortholog is 100%.

Group of orthologs #67. Best score 219 bits
Score difference with first non-orthologous sequence - C.trachomatis:219 L.chalumnae:219

O84081              	100.00%		H3AQR4              	100.00%
                    	       		H2ZVQ9              	55.31%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for H3AQR4 as seed ortholog is 100%.

Group of orthologs #68. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 L.chalumnae:218

O84642              	100.00%		H2ZVH7              	100.00%
                    	       		M3XLL5              	11.90%
                    	       		H3B1T1              	7.59%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for H2ZVH7 as seed ortholog is 100%.

Group of orthologs #69. Best score 216 bits
Score difference with first non-orthologous sequence - C.trachomatis:216 L.chalumnae:51

O84266              	100.00%		H3BEA5              	100.00%
                    	       		H3B1R8              	29.92%
                    	       		H3B2B9              	29.76%
                    	       		H3A5A8              	13.39%
                    	       		H3AJ22              	10.56%
                    	       		H2ZY13              	8.95%
                    	       		H2ZRX0              	7.35%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for H3BEA5 as seed ortholog is 91%.

Group of orthologs #70. Best score 214 bits
Score difference with first non-orthologous sequence - C.trachomatis:214 L.chalumnae:32

O84345              	100.00%		H3A6U6              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for H3A6U6 as seed ortholog is 91%.

Group of orthologs #71. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 L.chalumnae:207

O84297              	100.00%		H3ABG6              	100.00%
                    	       		H2ZU38              	54.62%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for H3ABG6 as seed ortholog is 100%.

Group of orthologs #72. Best score 203 bits
Score difference with first non-orthologous sequence - C.trachomatis:203 L.chalumnae:203

O84812              	100.00%		H3AYI8              	100.00%
                    	       		H3AAJ4              	16.26%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for H3AYI8 as seed ortholog is 100%.

Group of orthologs #73. Best score 203 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.chalumnae:203

O84712              	100.00%		H3AG32              	100.00%
Bootstrap support for O84712 as seed ortholog is 99%.
Bootstrap support for H3AG32 as seed ortholog is 100%.

Group of orthologs #74. Best score 203 bits
Score difference with first non-orthologous sequence - C.trachomatis:203 L.chalumnae:203

O84630              	100.00%		M3XJU4              	100.00%
Bootstrap support for O84630 as seed ortholog is 100%.
Bootstrap support for M3XJU4 as seed ortholog is 100%.

Group of orthologs #75. Best score 200 bits
Score difference with first non-orthologous sequence - C.trachomatis:200 L.chalumnae:200

O84613              	100.00%		H3AX22              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for H3AX22 as seed ortholog is 100%.

Group of orthologs #76. Best score 197 bits
Score difference with first non-orthologous sequence - C.trachomatis:197 L.chalumnae:197

O84638              	100.00%		H3BAS9              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for H3BAS9 as seed ortholog is 100%.

Group of orthologs #77. Best score 194 bits
Score difference with first non-orthologous sequence - C.trachomatis:194 L.chalumnae:194

O84596              	100.00%		H3AEC4              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for H3AEC4 as seed ortholog is 100%.

Group of orthologs #78. Best score 193 bits
Score difference with first non-orthologous sequence - C.trachomatis:193 L.chalumnae:193

O84859              	100.00%		H2ZYK7              	100.00%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for H2ZYK7 as seed ortholog is 100%.

Group of orthologs #79. Best score 192 bits
Score difference with first non-orthologous sequence - C.trachomatis:192 L.chalumnae:69

O84247              	100.00%		H3ARG3              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for H3ARG3 as seed ortholog is 98%.

Group of orthologs #80. Best score 189 bits
Score difference with first non-orthologous sequence - C.trachomatis:189 L.chalumnae:54

P38004              	100.00%		H3APP7              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for H3APP7 as seed ortholog is 96%.

Group of orthologs #81. Best score 187 bits
Score difference with first non-orthologous sequence - C.trachomatis:187 L.chalumnae:187

O84402              	100.00%		H3ARK4              	100.00%
                    	       		H3AHD4              	20.01%
                    	       		H3AY08              	7.71%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for H3ARK4 as seed ortholog is 100%.

Group of orthologs #82. Best score 187 bits
Score difference with first non-orthologous sequence - C.trachomatis:187 L.chalumnae:187

O84874              	100.00%		H3AP55              	100.00%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for H3AP55 as seed ortholog is 100%.

Group of orthologs #83. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 L.chalumnae:185

O84007              	100.00%		H3A5H3              	100.00%
Bootstrap support for O84007 as seed ortholog is 100%.
Bootstrap support for H3A5H3 as seed ortholog is 100%.

Group of orthologs #84. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 L.chalumnae:185

O84704              	100.00%		H3A9S8              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for H3A9S8 as seed ortholog is 100%.

Group of orthologs #85. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 L.chalumnae:5

P18584              	100.00%		H3ATZ8              	100.00%
Bootstrap support for P18584 as seed ortholog is 100%.
Bootstrap support for H3ATZ8 as seed ortholog is 55%.
Alternative seed ortholog is H2ZZW4 (5 bits away from this cluster)

Group of orthologs #86. Best score 181 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 L.chalumnae:181

O84755              	100.00%		M3XHU7              	100.00%
                    	       		H3AYY5              	47.13%
Bootstrap support for O84755 as seed ortholog is 89%.
Bootstrap support for M3XHU7 as seed ortholog is 100%.

Group of orthologs #87. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 L.chalumnae:178

O84065              	100.00%		H3AD61              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for H3AD61 as seed ortholog is 100%.

Group of orthologs #88. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 L.chalumnae:93

O84608              	100.00%		H3B406              	100.00%
                    	       		H2ZYG0              	21.41%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for H3B406 as seed ortholog is 99%.

Group of orthologs #89. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 L.chalumnae:4

O84423              	100.00%		H3B5X8              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for H3B5X8 as seed ortholog is 53%.
Alternative seed ortholog is H3AB13 (4 bits away from this cluster)

Group of orthologs #90. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 L.chalumnae:173

O84055              	100.00%		H3B3Y2              	100.00%
Bootstrap support for O84055 as seed ortholog is 99%.
Bootstrap support for H3B3Y2 as seed ortholog is 100%.

Group of orthologs #91. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 L.chalumnae:170

O84707              	100.00%		H3B1F6              	100.00%
                    	       		H2ZV24              	74.16%
                    	       		H2ZTN3              	35.27%
Bootstrap support for O84707 as seed ortholog is 100%.
Bootstrap support for H3B1F6 as seed ortholog is 100%.

Group of orthologs #92. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 L.chalumnae:166

O84274              	100.00%		H3AD82              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for H3AD82 as seed ortholog is 100%.

Group of orthologs #93. Best score 165 bits
Score difference with first non-orthologous sequence - C.trachomatis:165 L.chalumnae:165

O84456              	100.00%		H3A886              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for H3A886 as seed ortholog is 100%.

Group of orthologs #94. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 L.chalumnae:161

O84383              	100.00%		H3AXX3              	100.00%
Bootstrap support for O84383 as seed ortholog is 100%.
Bootstrap support for H3AXX3 as seed ortholog is 100%.

Group of orthologs #95. Best score 159 bits
Score difference with first non-orthologous sequence - C.trachomatis:159 L.chalumnae:94

O84561              	100.00%		H3BAF3              	100.00%
                    	       		H3B6J5              	36.23%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for H3BAF3 as seed ortholog is 98%.

Group of orthologs #96. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 L.chalumnae:158

O84234              	100.00%		H3AG86              	100.00%
                    	       		H3B2Y8              	58.33%
                    	       		H3B302              	39.76%
                    	       		H2ZYV9              	35.96%
                    	       		H3AZL2              	31.25%
                    	       		H3BIB7              	30.25%
                    	       		H2ZRV4              	29.44%
                    	       		H3A4N3              	28.99%
                    	       		H3BDU1              	28.99%
                    	       		H3BI94              	28.71%
                    	       		H2ZWC3              	28.17%
                    	       		H3A4J1              	28.17%
                    	       		H2ZX72              	26.90%
                    	       		H3B921              	23.37%
                    	       		H3AUR4              	21.20%
                    	       		H3AQG6              	17.57%
                    	       		H3B6Q8              	16.67%
                    	       		H3AB15              	16.67%
                    	       		H3AHW6              	16.49%
                    	       		H2ZZZ4              	15.40%
                    	       		H3ADK3              	10.69%
                    	       		H3A1D8              	8.33%
Bootstrap support for O84234 as seed ortholog is 100%.
Bootstrap support for H3AG86 as seed ortholog is 100%.

Group of orthologs #97. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 L.chalumnae:158

O84720              	100.00%		H3BD09              	100.00%
                    	       		H3B049              	42.09%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for H3BD09 as seed ortholog is 100%.

Group of orthologs #98. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 L.chalumnae:69

O84732              	100.00%		H3A0Q6              	100.00%
                    	       		H2ZW56              	55.71%
                    	       		H3AXY8              	52.77%
                    	       		H2ZT16              	41.68%
                    	       		H3BDY4              	10.31%
                    	       		M3XI19              	9.84%
                    	       		H3ANB8              	9.79%
                    	       		H3AHX2              	9.69%
                    	       		H2ZU49              	9.06%
                    	       		H3BI64              	6.91%
                    	       		H3A9B9              	6.86%
                    	       		H3ADK4              	6.39%
                    	       		H3AEX1              	5.81%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for H3A0Q6 as seed ortholog is 94%.

Group of orthologs #99. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 L.chalumnae:154

O84727              	100.00%		H3B391              	100.00%
                    	       		H3B5R5              	39.36%
                    	       		H3BB55              	21.81%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for H3B391 as seed ortholog is 100%.

Group of orthologs #100. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 L.chalumnae:59

O84200              	100.00%		H3B2Z7              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for H3B2Z7 as seed ortholog is 93%.

Group of orthologs #101. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 L.chalumnae:154

O84632              	100.00%		H3B2U7              	100.00%
Bootstrap support for O84632 as seed ortholog is 100%.
Bootstrap support for H3B2U7 as seed ortholog is 100%.

Group of orthologs #102. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 L.chalumnae:151

O84332              	100.00%		H3AAV8              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for H3AAV8 as seed ortholog is 100%.

Group of orthologs #103. Best score 149 bits
Score difference with first non-orthologous sequence - C.trachomatis:28 L.chalumnae:149

O84260              	100.00%		H3BHP5              	100.00%
Bootstrap support for O84260 as seed ortholog is 80%.
Bootstrap support for H3BHP5 as seed ortholog is 100%.

Group of orthologs #104. Best score 142 bits
Score difference with first non-orthologous sequence - C.trachomatis:142 L.chalumnae:142

O84734              	100.00%		H3BGA5              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for H3BGA5 as seed ortholog is 100%.

Group of orthologs #105. Best score 131 bits
Score difference with first non-orthologous sequence - C.trachomatis:131 L.chalumnae:131

O84835              	100.00%		H3AWZ8              	100.00%
                    	       		H3AT42              	71.58%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for H3AWZ8 as seed ortholog is 100%.

Group of orthologs #106. Best score 131 bits
Score difference with first non-orthologous sequence - C.trachomatis:131 L.chalumnae:131

O84123              	100.00%		H3A0F4              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for H3A0F4 as seed ortholog is 100%.

Group of orthologs #107. Best score 131 bits
Score difference with first non-orthologous sequence - C.trachomatis:131 L.chalumnae:79

O84589              	100.00%		H3A9M3              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for H3A9M3 as seed ortholog is 97%.

Group of orthologs #108. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 L.chalumnae:129

O84771              	100.00%		H3B1G7              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for H3B1G7 as seed ortholog is 100%.

Group of orthologs #109. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 L.chalumnae:63

O84033              	100.00%		H3ARW6              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for H3ARW6 as seed ortholog is 98%.

Group of orthologs #110. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 L.chalumnae:127

O84579              	100.00%		M3XJ87              	100.00%
Bootstrap support for O84579 as seed ortholog is 100%.
Bootstrap support for M3XJ87 as seed ortholog is 100%.

Group of orthologs #111. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 L.chalumnae:38

O84530              	100.00%		H3B6G4              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for H3B6G4 as seed ortholog is 89%.

Group of orthologs #112. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 L.chalumnae:124

O84864              	100.00%		H3BE21              	100.00%
                    	       		H3A6G7              	8.33%
                    	       		H3A5I1              	7.66%
                    	       		H3BG44              	7.56%
                    	       		H3AYL5              	5.62%
                    	       		H3AX38              	5.52%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for H3BE21 as seed ortholog is 100%.

Group of orthologs #113. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 L.chalumnae:121

O84752              	100.00%		H3ARI0              	100.00%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for H3ARI0 as seed ortholog is 100%.

Group of orthologs #114. Best score 120 bits
Score difference with first non-orthologous sequence - C.trachomatis:120 L.chalumnae:120

O84649              	100.00%		H3AKB8              	100.00%
                    	       		H3B0D1              	11.88%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for H3AKB8 as seed ortholog is 100%.

Group of orthologs #115. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 L.chalumnae:37

O84130              	100.00%		H3A640              	100.00%
                    	       		H2ZV67              	48.97%
                    	       		M3XK55              	5.31%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for H3A640 as seed ortholog is 87%.

Group of orthologs #116. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 L.chalumnae:69

P66370              	100.00%		H3BGB3              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for H3BGB3 as seed ortholog is 99%.

Group of orthologs #117. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 L.chalumnae:51

O84096              	100.00%		H3B4S8              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for H3B4S8 as seed ortholog is 95%.

Group of orthologs #118. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 L.chalumnae:109

O84391              	100.00%		H3B2C3              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for H3B2C3 as seed ortholog is 100%.

Group of orthologs #119. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 L.chalumnae:14

O84508              	100.00%		H3BEM9              	100.00%
                    	       		H3AA08              	42.04%
                    	       		H3AYT5              	25.66%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for H3BEM9 as seed ortholog is 72%.
Alternative seed ortholog is H3B5E2 (14 bits away from this cluster)

Group of orthologs #120. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 L.chalumnae:108

O84851              	100.00%		H3A0K1              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for H3A0K1 as seed ortholog is 100%.

Group of orthologs #121. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 L.chalumnae:108

O84463              	100.00%		H3AVX1              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for H3AVX1 as seed ortholog is 100%.

Group of orthologs #122. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 L.chalumnae:61

P0CE06              	100.00%		H3A182              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for H3A182 as seed ortholog is 98%.

Group of orthologs #123. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 L.chalumnae:107

O84196              	100.00%		H3BAY6              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for H3BAY6 as seed ortholog is 100%.

Group of orthologs #124. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 L.chalumnae:106

O84415              	100.00%		H3AZG3              	100.00%
O84710              	6.77%		
Bootstrap support for O84415 as seed ortholog is 100%.
Bootstrap support for H3AZG3 as seed ortholog is 100%.

Group of orthologs #125. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 L.chalumnae:102

O84478              	100.00%		H3AKI6              	100.00%
Bootstrap support for O84478 as seed ortholog is 100%.
Bootstrap support for H3AKI6 as seed ortholog is 100%.

Group of orthologs #126. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 L.chalumnae:101

P55137              	100.00%		H3BDC6              	100.00%
                    	       		H3B9R3              	19.02%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for H3BDC6 as seed ortholog is 100%.

Group of orthologs #127. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 L.chalumnae:101

O84578              	100.00%		H3A5P1              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for H3A5P1 as seed ortholog is 100%.

Group of orthologs #128. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 L.chalumnae:101

O84350              	100.00%		H3B9L6              	100.00%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for H3B9L6 as seed ortholog is 100%.

Group of orthologs #129. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 L.chalumnae:30

P0CE03              	100.00%		H3AFM8              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for H3AFM8 as seed ortholog is 95%.

Group of orthologs #130. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 L.chalumnae:97

O84750              	100.00%		H3A3Z4              	100.00%
Bootstrap support for O84750 as seed ortholog is 100%.
Bootstrap support for H3A3Z4 as seed ortholog is 100%.

Group of orthologs #131. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 L.chalumnae:96

O84390              	100.00%		H3B7H7              	100.00%
                    	       		H3AX93              	57.93%
                    	       		H3AZZ9              	39.02%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for H3B7H7 as seed ortholog is 100%.

Group of orthologs #132. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 L.chalumnae:96

O84435              	100.00%		H3BFQ5              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for H3BFQ5 as seed ortholog is 100%.

Group of orthologs #133. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 L.chalumnae:95

O84212              	100.00%		H3B6I7              	100.00%
                    	       		H3A3S4              	6.40%
                    	       		H3B5G2              	5.52%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for H3B6I7 as seed ortholog is 100%.

Group of orthologs #134. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 L.chalumnae:11

O84358              	100.00%		H3AXD8              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for H3AXD8 as seed ortholog is 57%.
Alternative seed ortholog is H2ZYS5 (11 bits away from this cluster)

Group of orthologs #135. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 L.chalumnae:31

O84128              	100.00%		H3B142              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for H3B142 as seed ortholog is 91%.

Group of orthologs #136. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:93 L.chalumnae:93

O84782              	100.00%		H2ZSB7              	100.00%
                    	       		H3B343              	18.75%
                    	       		H3B216              	13.07%
                    	       		H3B3N8              	12.12%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for H2ZSB7 as seed ortholog is 100%.

Group of orthologs #137. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:93 L.chalumnae:93

O84442              	100.00%		H3AZL8              	100.00%
                    	       		H3BGP9              	20.25%
                    	       		H3AFP6              	13.85%
                    	       		H3BE24              	9.77%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for H3AZL8 as seed ortholog is 100%.

Group of orthologs #138. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:93 L.chalumnae:93

O84241              	100.00%		H3BBW9              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for H3BBW9 as seed ortholog is 100%.

Group of orthologs #139. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 L.chalumnae:92

O84719              	100.00%		H2ZZA0              	100.00%
                    	       		H3ATR1              	76.92%
                    	       		H3B379              	68.41%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for H2ZZA0 as seed ortholog is 100%.

Group of orthologs #140. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 L.chalumnae:92

O84492              	100.00%		H3BB46              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for H3BB46 as seed ortholog is 100%.

Group of orthologs #141. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 L.chalumnae:91

O84806              	100.00%		H3BAV5              	100.00%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for H3BAV5 as seed ortholog is 100%.

Group of orthologs #142. Best score 88 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 L.chalumnae:88

O84357              	100.00%		H3AJV4              	100.00%
Bootstrap support for O84357 as seed ortholog is 100%.
Bootstrap support for H3AJV4 as seed ortholog is 100%.

Group of orthologs #143. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 L.chalumnae:87

O84544              	100.00%		H2ZY23              	100.00%
                    	       		M3XI97              	17.46%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for H2ZY23 as seed ortholog is 100%.

Group of orthologs #144. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 L.chalumnae:87

O84468              	100.00%		H3ATN4              	100.00%
Bootstrap support for O84468 as seed ortholog is 100%.
Bootstrap support for H3ATN4 as seed ortholog is 100%.

Group of orthologs #145. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 L.chalumnae:44

O84687              	100.00%		H3BHR6              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for H3BHR6 as seed ortholog is 86%.

Group of orthologs #146. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 L.chalumnae:84

O84595              	100.00%		H3B8R6              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for H3B8R6 as seed ortholog is 100%.

Group of orthologs #147. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 L.chalumnae:81

O84781              	100.00%		H3A4A6              	100.00%
                    	       		H3A108              	68.95%
                    	       		H3AXU8              	17.67%
                    	       		H3AJJ4              	17.24%
                    	       		H3AAB0              	16.95%
                    	       		H3ARP6              	16.87%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for H3A4A6 as seed ortholog is 100%.

Group of orthologs #148. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 L.chalumnae:12

O84599              	100.00%		H3A7H2              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for H3A7H2 as seed ortholog is 61%.
Alternative seed ortholog is H2ZRK8 (12 bits away from this cluster)

Group of orthologs #149. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 L.chalumnae:81

O84535              	100.00%		H3BB44              	100.00%
Bootstrap support for O84535 as seed ortholog is 100%.
Bootstrap support for H3BB44 as seed ortholog is 100%.

Group of orthologs #150. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 L.chalumnae:80

O84338              	100.00%		H3BGZ0              	100.00%
                    	       		H3BBL3              	18.49%
                    	       		H3BEI1              	18.49%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for H3BGZ0 as seed ortholog is 100%.

Group of orthologs #151. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 L.chalumnae:79

O84684              	100.00%		H3APX0              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for H3APX0 as seed ortholog is 100%.

Group of orthologs #152. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 L.chalumnae:78

O84189              	100.00%		H3AHH1              	100.00%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for H3AHH1 as seed ortholog is 100%.

Group of orthologs #153. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 L.chalumnae:76

P36424              	100.00%		H3ARE2              	100.00%
                    	       		H3ABV3              	34.08%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for H3ARE2 as seed ortholog is 100%.

Group of orthologs #154. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 L.chalumnae:75

O84547              	100.00%		H2ZWW5              	100.00%
                    	       		H3A060              	19.61%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for H2ZWW5 as seed ortholog is 100%.

Group of orthologs #155. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 L.chalumnae:74

O84686              	100.00%		H3BFF6              	100.00%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for H3BFF6 as seed ortholog is 100%.

Group of orthologs #156. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 L.chalumnae:74

O84842              	100.00%		H3BIR9              	100.00%
Bootstrap support for O84842 as seed ortholog is 100%.
Bootstrap support for H3BIR9 as seed ortholog is 100%.

Group of orthologs #157. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 L.chalumnae:73

O84499              	100.00%		H2ZWC2              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for H2ZWC2 as seed ortholog is 100%.

Group of orthologs #158. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.chalumnae:71

O84792              	100.00%		H3AMF2              	100.00%
Bootstrap support for O84792 as seed ortholog is 100%.
Bootstrap support for H3AMF2 as seed ortholog is 100%.

Group of orthologs #159. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.chalumnae:71

O84139              	100.00%		H3AR72              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for H3AR72 as seed ortholog is 100%.

Group of orthologs #160. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.chalumnae:71

O84665              	100.00%		H3AS95              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for H3AS95 as seed ortholog is 100%.

Group of orthologs #161. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.chalumnae:5

O84469              	100.00%		H3BHM1              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for H3BHM1 as seed ortholog is 44%.
Alternative seed ortholog is H3ASP7 (5 bits away from this cluster)

Group of orthologs #162. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 L.chalumnae:70

O84108              	100.00%		H3AK91              	100.00%
Bootstrap support for O84108 as seed ortholog is 100%.
Bootstrap support for H3AK91 as seed ortholog is 100%.

Group of orthologs #163. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 L.chalumnae:19

P0CD81              	100.00%		H3A5R1              	100.00%
                    	       		H3ADD1              	97.64%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for H3A5R1 as seed ortholog is 79%.

Group of orthologs #164. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 L.chalumnae:3

O84650              	100.00%		H3AAB6              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for H3AAB6 as seed ortholog is 56%.
Alternative seed ortholog is H2ZSY7 (3 bits away from this cluster)

Group of orthologs #165. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 L.chalumnae:67

P0C0Z8              	100.00%		H3B6D7              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for H3B6D7 as seed ortholog is 100%.

Group of orthologs #166. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.chalumnae:13

O84633              	100.00%		H3AEH1              	100.00%
                    	       		H3AJS1              	6.77%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for H3AEH1 as seed ortholog is 64%.
Alternative seed ortholog is H3AWR4 (13 bits away from this cluster)

Group of orthologs #167. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.chalumnae:66

O84284              	100.00%		H3A9L9              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for H3A9L9 as seed ortholog is 100%.

Group of orthologs #168. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.chalumnae:66

O84366              	100.00%		H3AQH4              	100.00%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for H3AQH4 as seed ortholog is 100%.

Group of orthologs #169. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.chalumnae:66

O84127              	100.00%		H3B6N8              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for H3B6N8 as seed ortholog is 100%.

Group of orthologs #170. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 L.chalumnae:61

P0CD84              	100.00%		H3B668              	100.00%
Bootstrap support for P0CD84 as seed ortholog is 100%.
Bootstrap support for H3B668 as seed ortholog is 100%.

Group of orthologs #171. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 L.chalumnae:60

O84379              	100.00%		H3A981              	100.00%
                    	       		H3APS3              	43.40%
                    	       		H3ATR4              	42.00%
Bootstrap support for O84379 as seed ortholog is 100%.
Bootstrap support for H3A981 as seed ortholog is 100%.

Group of orthologs #172. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 L.chalumnae:18

O84496              	100.00%		H3A703              	100.00%
                    	       		H3AGB5              	22.84%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for H3A703 as seed ortholog is 64%.
Alternative seed ortholog is H3AVP2 (18 bits away from this cluster)

Group of orthologs #173. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 L.chalumnae:59

P0CD83              	100.00%		H2ZY36              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for H2ZY36 as seed ortholog is 100%.

Group of orthologs #174. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 L.chalumnae:59

O84840              	100.00%		H3B460              	100.00%
Bootstrap support for O84840 as seed ortholog is 100%.
Bootstrap support for H3B460 as seed ortholog is 100%.

Group of orthologs #175. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 L.chalumnae:58

O84218              	100.00%		H3A827              	100.00%
                    	       		H3ALS9              	100.00%
                    	       		H3A009              	68.46%
                    	       		H3A9F1              	63.30%
                    	       		H3B3X6              	43.12%
                    	       		H3AHW9              	33.69%
                    	       		H3AUZ7              	33.14%
                    	       		H2ZXM3              	30.39%
                    	       		H3AEZ9              	30.36%
                    	       		H3A3I2              	22.02%
                    	       		H3A5L8              	6.65%
                    	       		H3AGX9              	5.73%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for H3A827 as seed ortholog is 100%.
Bootstrap support for H3ALS9 as seed ortholog is 100%.

Group of orthologs #176. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 L.chalumnae:58

O84395              	100.00%		H3AMZ6              	100.00%
                    	       		H3B744              	54.89%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for H3AMZ6 as seed ortholog is 100%.

Group of orthologs #177. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 L.chalumnae:58

O84221              	100.00%		H3AS40              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for H3AS40 as seed ortholog is 100%.

Group of orthologs #178. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.chalumnae:57

O84822              	100.00%		H2ZUS7              	100.00%
                    	       		H3AQY8              	69.85%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for H2ZUS7 as seed ortholog is 100%.

Group of orthologs #179. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.chalumnae:57

O84532              	100.00%		H3ALI4              	100.00%
Bootstrap support for O84532 as seed ortholog is 100%.
Bootstrap support for H3ALI4 as seed ortholog is 100%.

Group of orthologs #180. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.chalumnae:57

P0CD79              	100.00%		H3ASZ1              	100.00%
Bootstrap support for P0CD79 as seed ortholog is 100%.
Bootstrap support for H3ASZ1 as seed ortholog is 100%.

Group of orthologs #181. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 L.chalumnae:56

O84826              	100.00%		M3XJB9              	100.00%
                    	       		H3AEG5              	28.55%
                    	       		H3ACW5              	25.13%
                    	       		H3BF52              	24.78%
                    	       		H3AAX5              	20.83%
                    	       		H2ZZK8              	12.57%
Bootstrap support for O84826 as seed ortholog is 100%.
Bootstrap support for M3XJB9 as seed ortholog is 100%.

Group of orthologs #182. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 L.chalumnae:56

P0CE02              	100.00%		H3A519              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for H3A519 as seed ortholog is 100%.

Group of orthologs #183. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 L.chalumnae:56

O84527              	100.00%		H3AB87              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for H3AB87 as seed ortholog is 100%.

Group of orthologs #184. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 L.chalumnae:54

O84689              	100.00%		H2ZXI1              	100.00%
Bootstrap support for O84689 as seed ortholog is 100%.
Bootstrap support for H2ZXI1 as seed ortholog is 100%.

Group of orthologs #185. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 L.chalumnae:53

O84160              	100.00%		H2ZTC7              	100.00%
O84159              	20.53%		
O84156              	12.41%		
O84086              	11.22%		
O84157              	5.49%		
Bootstrap support for O84160 as seed ortholog is 100%.
Bootstrap support for H2ZTC7 as seed ortholog is 100%.

Group of orthologs #186. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 L.chalumnae:53

O84320              	100.00%		H3AI35              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for H3AI35 as seed ortholog is 100%.

Group of orthologs #187. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 L.chalumnae:52

P66480              	100.00%		H3AMK4              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for H3AMK4 as seed ortholog is 100%.

Group of orthologs #188. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 L.chalumnae:50

O84027              	100.00%		H3AAY7              	100.00%
Bootstrap support for O84027 as seed ortholog is 100%.
Bootstrap support for H3AAY7 as seed ortholog is 100%.

Group of orthologs #189. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 L.chalumnae:50

O84715              	100.00%		H3AHK3              	100.00%
Bootstrap support for O84715 as seed ortholog is 100%.
Bootstrap support for H3AHK3 as seed ortholog is 100%.

Group of orthologs #190. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 L.chalumnae:49

O84618              	100.00%		H3ADL5              	100.00%
                    	       		H3AFF7              	25.34%
Bootstrap support for O84618 as seed ortholog is 100%.
Bootstrap support for H3ADL5 as seed ortholog is 100%.

Group of orthologs #191. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 L.chalumnae:49

P0CE04              	100.00%		H3ARX8              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for H3ARX8 as seed ortholog is 100%.

Group of orthologs #192. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 L.chalumnae:49

O84029              	100.00%		H3BIT2              	100.00%
Bootstrap support for O84029 as seed ortholog is 100%.
Bootstrap support for H3BIT2 as seed ortholog is 100%.

Group of orthologs #193. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 L.chalumnae:48

O84301              	100.00%		H3BDW3              	100.00%
Bootstrap support for O84301 as seed ortholog is 100%.
Bootstrap support for H3BDW3 as seed ortholog is 100%.

Group of orthologs #194. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 L.chalumnae:47

O84321              	100.00%		H3AA50              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for H3AA50 as seed ortholog is 100%.

Group of orthologs #195. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 L.chalumnae:45

O84261              	100.00%		H3AB04              	100.00%
                    	       		H2ZZA5              	43.27%
                    	       		H3ACF2              	12.13%
                    	       		H3BH13              	11.11%
                    	       		H3AUD4              	10.96%
                    	       		H3B1C5              	10.38%
                    	       		H3AWP3              	9.94%
                    	       		H3AW71              	9.65%
Bootstrap support for O84261 as seed ortholog is 100%.
Bootstrap support for H3AB04 as seed ortholog is 100%.

Group of orthologs #196. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 L.chalumnae:45

O84655              	100.00%		H3ABJ5              	100.00%
Bootstrap support for O84655 as seed ortholog is 100%.
Bootstrap support for H3ABJ5 as seed ortholog is 100%.

Group of orthologs #197. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 L.chalumnae:44

O84778              	100.00%		H3AD65              	100.00%
Bootstrap support for O84778 as seed ortholog is 100%.
Bootstrap support for H3AD65 as seed ortholog is 100%.

Group of orthologs #198. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 L.chalumnae:43

O84138              	100.00%		H3ATC3              	100.00%
                    	       		H3B980              	54.59%
                    	       		H3A7T1              	13.88%
Bootstrap support for O84138 as seed ortholog is 100%.
Bootstrap support for H3ATC3 as seed ortholog is 100%.

Group of orthologs #199. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 L.chalumnae:42

O84263              	100.00%		H2ZU14              	100.00%
O84541              	14.29%		
Bootstrap support for O84263 as seed ortholog is 100%.
Bootstrap support for H2ZU14 as seed ortholog is 100%.

Group of orthologs #200. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 L.chalumnae:42

O84808              	100.00%		H3ASZ4              	100.00%
Bootstrap support for O84808 as seed ortholog is 100%.
Bootstrap support for H3ASZ4 as seed ortholog is 100%.

Group of orthologs #201. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 L.chalumnae:40

O84470              	100.00%		H3A2N8              	100.00%
Bootstrap support for O84470 as seed ortholog is 100%.
Bootstrap support for H3A2N8 as seed ortholog is 100%.