###################################
205 groups of orthologs
209 in-paralogs from C.trachomatis
382 in-paralogs from L.africana
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 921 bits
Score difference with first non-orthologous sequence - C.trachomatis:921 L.africana:637

O84022              	100.00%		G3TAH7              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for G3TAH7 as seed ortholog is 100%.

Group of orthologs #2. Best score 854 bits
Score difference with first non-orthologous sequence - C.trachomatis:854 L.africana:854

O84250              	100.00%		G3TF39              	100.00%
                    	       		G3TI75              	65.93%
                    	       		G3UBG8              	22.72%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for G3TF39 as seed ortholog is 100%.

Group of orthologs #3. Best score 712 bits
Score difference with first non-orthologous sequence - C.trachomatis:712 L.africana:151

P17821              	100.00%		G3TNM6              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for G3TNM6 as seed ortholog is 99%.

Group of orthologs #4. Best score 681 bits
Score difference with first non-orthologous sequence - C.trachomatis:681 L.africana:224

O84348              	100.00%		G3U562              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for G3U562 as seed ortholog is 100%.

Group of orthologs #5. Best score 623 bits
Score difference with first non-orthologous sequence - C.trachomatis:623 L.africana:623

O84716              	100.00%		G5E6Z1              	100.00%
                    	       		G3T3F0              	43.46%
Bootstrap support for O84716 as seed ortholog is 100%.
Bootstrap support for G5E6Z1 as seed ortholog is 100%.

Group of orthologs #6. Best score 582 bits
Score difference with first non-orthologous sequence - C.trachomatis:582 L.africana:450

O84067              	100.00%		G3T6R3              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for G3T6R3 as seed ortholog is 100%.

Group of orthologs #7. Best score 542 bits
Score difference with first non-orthologous sequence - C.trachomatis:349 L.africana:464

P0C0Z7              	100.00%		G3SL08              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for G3SL08 as seed ortholog is 100%.

Group of orthologs #8. Best score 518 bits
Score difference with first non-orthologous sequence - C.trachomatis:518 L.africana:50

O84444              	100.00%		G3T6J9              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for G3T6J9 as seed ortholog is 83%.

Group of orthologs #9. Best score 517 bits
Score difference with first non-orthologous sequence - C.trachomatis:517 L.africana:517

O84057              	100.00%		G3TBV2              	100.00%
                    	       		G3T247              	65.17%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for G3TBV2 as seed ortholog is 100%.

Group of orthologs #10. Best score 513 bits
Score difference with first non-orthologous sequence - C.trachomatis:513 L.africana:319

O84304              	100.00%		G5E7F5              	100.00%
                    	       		G3TEN1              	24.32%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for G5E7F5 as seed ortholog is 100%.

Group of orthologs #11. Best score 505 bits
Score difference with first non-orthologous sequence - C.trachomatis:505 L.africana:505

O84834              	100.00%		G3T1V0              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for G3T1V0 as seed ortholog is 100%.

Group of orthologs #12. Best score 493 bits
Score difference with first non-orthologous sequence - C.trachomatis:493 L.africana:493

O84066              	100.00%		G3T411              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for G3T411 as seed ortholog is 100%.

Group of orthologs #13. Best score 481 bits
Score difference with first non-orthologous sequence - C.trachomatis:481 L.africana:481

O84585              	100.00%		G3T8G5              	100.00%
                    	       		G3T4H5              	66.23%
                    	       		G3SVA7              	31.48%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for G3T8G5 as seed ortholog is 100%.

Group of orthologs #14. Best score 475 bits
Score difference with first non-orthologous sequence - C.trachomatis:475 L.africana:475

O84863              	100.00%		G3SWS6              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for G3SWS6 as seed ortholog is 100%.

Group of orthologs #15. Best score 466 bits
Score difference with first non-orthologous sequence - C.trachomatis:466 L.africana:466

P0CD73              	100.00%		G3T0N0              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for G3T0N0 as seed ortholog is 100%.

Group of orthologs #16. Best score 450 bits
Score difference with first non-orthologous sequence - C.trachomatis:450 L.africana:19

O84848              	100.00%		G5E7C3              	100.00%
                    	       		G3TH98              	54.74%
                    	       		G3TYK9              	5.40%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for G5E7C3 as seed ortholog is 67%.
Alternative seed ortholog is G3TMJ0 (19 bits away from this cluster)

Group of orthologs #17. Best score 450 bits
Score difference with first non-orthologous sequence - C.trachomatis:450 L.africana:294

P0CD71              	100.00%		G3UIV9              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for G3UIV9 as seed ortholog is 100%.

Group of orthologs #18. Best score 449 bits
Score difference with first non-orthologous sequence - C.trachomatis:449 L.africana:345

O84211              	100.00%		G3SQI6              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for G3SQI6 as seed ortholog is 100%.

Group of orthologs #19. Best score 448 bits
Score difference with first non-orthologous sequence - C.trachomatis:448 L.africana:392

O84754              	100.00%		G3SYJ8              	100.00%
                    	       		G3TCX9              	22.06%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for G3SYJ8 as seed ortholog is 100%.

Group of orthologs #20. Best score 445 bits
Score difference with first non-orthologous sequence - C.trachomatis:445 L.africana:246

O84460              	100.00%		G3ST90              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for G3ST90 as seed ortholog is 100%.

Group of orthologs #21. Best score 425 bits
Score difference with first non-orthologous sequence - C.trachomatis:425 L.africana:425

O84126              	100.00%		G3TE76              	100.00%
                    	       		G3TK04              	5.02%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for G3TE76 as seed ortholog is 100%.

Group of orthologs #22. Best score 418 bits
Score difference with first non-orthologous sequence - C.trachomatis:418 L.africana:269

O84546              	100.00%		G3T2D7              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for G3T2D7 as seed ortholog is 100%.

Group of orthologs #23. Best score 416 bits
Score difference with first non-orthologous sequence - C.trachomatis:416 L.africana:416

Q59321              	100.00%		G3TWD8              	100.00%
                    	       		G3THF4              	75.98%
                    	       		G3TBH1              	61.44%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for G3TWD8 as seed ortholog is 100%.

Group of orthologs #24. Best score 384 bits
Score difference with first non-orthologous sequence - C.trachomatis:384 L.africana:384

O84310              	100.00%		G3TBD1              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for G3TBD1 as seed ortholog is 100%.

Group of orthologs #25. Best score 373 bits
Score difference with first non-orthologous sequence - C.trachomatis:373 L.africana:373

O84831              	100.00%		G3TIM5              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for G3TIM5 as seed ortholog is 100%.

Group of orthologs #26. Best score 368 bits
Score difference with first non-orthologous sequence - C.trachomatis:368 L.africana:276

O84591              	100.00%		G3SWJ6              	100.00%
                    	       		G3SZZ0              	73.89%
                    	       		G3U4E5              	73.48%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for G3SWJ6 as seed ortholog is 100%.

Group of orthologs #27. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:364 L.africana:364

P0CE13              	100.00%		G3T653              	100.00%
                    	       		G3SR49              	18.28%
                    	       		G3UNL7              	16.45%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for G3T653 as seed ortholog is 100%.

Group of orthologs #28. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:364 L.africana:364

O84849              	100.00%		G3TNR0              	100.00%
Bootstrap support for O84849 as seed ortholog is 100%.
Bootstrap support for G3TNR0 as seed ortholog is 100%.

Group of orthologs #29. Best score 342 bits
Score difference with first non-orthologous sequence - C.trachomatis:342 L.africana:342

O84829              	100.00%		G3TDE3              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for G3TDE3 as seed ortholog is 100%.

Group of orthologs #30. Best score 327 bits
Score difference with first non-orthologous sequence - C.trachomatis:327 L.africana:327

O84006              	100.00%		G3TAA4              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for G3TAA4 as seed ortholog is 100%.

Group of orthologs #31. Best score 321 bits
Score difference with first non-orthologous sequence - C.trachomatis:321 L.africana:108

O84248              	100.00%		G3SRE0              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for G3SRE0 as seed ortholog is 99%.

Group of orthologs #32. Best score 317 bits
Score difference with first non-orthologous sequence - C.trachomatis:317 L.africana:247

O84786              	100.00%		G3TEY5              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for G3TEY5 as seed ortholog is 100%.

Group of orthologs #33. Best score 308 bits
Score difference with first non-orthologous sequence - C.trachomatis:308 L.africana:308

O84823              	100.00%		G3T7W9              	100.00%
                    	       		G3SZX2              	74.81%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for G3T7W9 as seed ortholog is 100%.

Group of orthologs #34. Best score 308 bits
Score difference with first non-orthologous sequence - C.trachomatis:308 L.africana:154

O84561              	100.00%		G3SMF3              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for G3SMF3 as seed ortholog is 99%.

Group of orthologs #35. Best score 307 bits
Score difference with first non-orthologous sequence - C.trachomatis:307 L.africana:143

O84035              	100.00%		G3TBG4              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for G3TBG4 as seed ortholog is 99%.

Group of orthologs #36. Best score 304 bits
Score difference with first non-orthologous sequence - C.trachomatis:304 L.africana:304

P0CD78              	100.00%		G3T214              	100.00%
                    	       		G3T8H2              	87.31%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for G3T214 as seed ortholog is 100%.

Group of orthologs #37. Best score 298 bits
Score difference with first non-orthologous sequence - C.trachomatis:298 L.africana:298

P0CE21              	100.00%		G3TJT5              	100.00%
                    	       		G3SS22              	58.38%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for G3TJT5 as seed ortholog is 100%.

Group of orthologs #38. Best score 293 bits
Score difference with first non-orthologous sequence - C.trachomatis:293 L.africana:293

O84775              	100.00%		G3TBR4              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for G3TBR4 as seed ortholog is 100%.

Group of orthologs #39. Best score 288 bits
Score difference with first non-orthologous sequence - C.trachomatis:288 L.africana:288

O84451              	100.00%		G3SMT9              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for G3SMT9 as seed ortholog is 100%.

Group of orthologs #40. Best score 287 bits
Score difference with first non-orthologous sequence - C.trachomatis:287 L.africana:287

O84698              	100.00%		G3T312              	100.00%
                    	       		G3STE6              	42.59%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for G3T312 as seed ortholog is 100%.

Group of orthologs #41. Best score 287 bits
Score difference with first non-orthologous sequence - C.trachomatis:287 L.africana:287

O84315              	100.00%		G3SWF2              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for G3SWF2 as seed ortholog is 100%.

Group of orthologs #42. Best score 283 bits
Score difference with first non-orthologous sequence - C.trachomatis:117 L.africana:157

O84249              	100.00%		G3T459              	100.00%
Bootstrap support for O84249 as seed ortholog is 99%.
Bootstrap support for G3T459 as seed ortholog is 99%.

Group of orthologs #43. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 L.africana:280

O84711              	100.00%		G3SVA6              	100.00%
Bootstrap support for O84711 as seed ortholog is 100%.
Bootstrap support for G3SVA6 as seed ortholog is 100%.

Group of orthologs #44. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 L.africana:278

O84316              	100.00%		G3TV69              	100.00%
                    	       		G3THI7              	11.99%
                    	       		G3TE69              	6.80%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for G3TV69 as seed ortholog is 100%.

Group of orthologs #45. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 L.africana:278

O84828              	100.00%		G3TRW0              	100.00%
                    	       		G3TEU9              	19.21%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for G3TRW0 as seed ortholog is 100%.

Group of orthologs #46. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 L.africana:277

O84188              	100.00%		G3T636              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for G3T636 as seed ortholog is 100%.

Group of orthologs #47. Best score 276 bits
Score difference with first non-orthologous sequence - C.trachomatis:276 L.africana:276

P0CE09              	100.00%		G3SRW7              	100.00%
                    	       		G3SNX7              	23.29%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for G3SRW7 as seed ortholog is 100%.

Group of orthologs #48. Best score 264 bits
Score difference with first non-orthologous sequence - C.trachomatis:264 L.africana:264

O84094              	100.00%		G3SR05              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for G3SR05 as seed ortholog is 100%.

Group of orthologs #49. Best score 260 bits
Score difference with first non-orthologous sequence - C.trachomatis:260 L.africana:260

O84439              	100.00%		G3T3D0              	100.00%
                    	       		G3T7N9              	50.07%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for G3T3D0 as seed ortholog is 100%.

Group of orthologs #50. Best score 258 bits
Score difference with first non-orthologous sequence - C.trachomatis:258 L.africana:258

P36431              	100.00%		G3T2D9              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for G3T2D9 as seed ortholog is 100%.

Group of orthologs #51. Best score 256 bits
Score difference with first non-orthologous sequence - C.trachomatis:256 L.africana:9

O84797              	100.00%		G3SNU7              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for G3SNU7 as seed ortholog is 56%.
Alternative seed ortholog is G3TEX7 (9 bits away from this cluster)

Group of orthologs #52. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:255 L.africana:255

P0CD72              	100.00%		G3TBY5              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for G3TBY5 as seed ortholog is 100%.

Group of orthologs #53. Best score 253 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 L.africana:142

O84548              	100.00%		G3U6K9              	100.00%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for G3U6K9 as seed ortholog is 99%.

Group of orthologs #54. Best score 251 bits
Score difference with first non-orthologous sequence - C.trachomatis:251 L.africana:172

O84381              	100.00%		G3TH55              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for G3TH55 as seed ortholog is 100%.

Group of orthologs #55. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 L.africana:106

O84026              	100.00%		G3STH6              	100.00%
                    	       		G3TNV5              	14.48%
Bootstrap support for O84026 as seed ortholog is 97%.
Bootstrap support for G3STH6 as seed ortholog is 99%.

Group of orthologs #56. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 L.africana:127

O84058              	100.00%		G3T9M5              	100.00%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for G3T9M5 as seed ortholog is 99%.

Group of orthologs #57. Best score 245 bits
Score difference with first non-orthologous sequence - C.trachomatis:245 L.africana:117

O84642              	100.00%		G3SL42              	100.00%
                    	       		G3SL74              	24.32%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for G3SL42 as seed ortholog is 99%.

Group of orthologs #58. Best score 243 bits
Score difference with first non-orthologous sequence - C.trachomatis:243 L.africana:243

O84360              	100.00%		G3TQ72              	100.00%
Bootstrap support for O84360 as seed ortholog is 100%.
Bootstrap support for G3TQ72 as seed ortholog is 100%.

Group of orthologs #59. Best score 241 bits
Score difference with first non-orthologous sequence - C.trachomatis:241 L.africana:241

O84297              	100.00%		G3SRB4              	100.00%
                    	       		G3SVH5              	48.74%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for G3SRB4 as seed ortholog is 100%.

Group of orthologs #60. Best score 241 bits
Score difference with first non-orthologous sequence - C.trachomatis:241 L.africana:241

O84787              	100.00%		G3SWK2              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for G3SWK2 as seed ortholog is 100%.

Group of orthologs #61. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 L.africana:174

O84309              	100.00%		G3TXW2              	100.00%
                    	       		G3TQV9              	58.34%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for G3TXW2 as seed ortholog is 100%.

Group of orthologs #62. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:237 L.africana:56

O84423              	100.00%		G3T7F5              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for G3T7F5 as seed ortholog is 96%.

Group of orthologs #63. Best score 234 bits
Score difference with first non-orthologous sequence - C.trachomatis:234 L.africana:142

O84352              	100.00%		G3TDV1              	100.00%
                    	       		G3T2A0              	16.05%
                    	       		G3TIJ3              	13.81%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for G3TDV1 as seed ortholog is 99%.

Group of orthologs #64. Best score 230 bits
Score difference with first non-orthologous sequence - C.trachomatis:230 L.africana:230

O84007              	100.00%		G3TNX0              	100.00%
Bootstrap support for O84007 as seed ortholog is 100%.
Bootstrap support for G3TNX0 as seed ortholog is 100%.

Group of orthologs #65. Best score 229 bits
Score difference with first non-orthologous sequence - C.trachomatis:229 L.africana:92

O84049              	100.00%		G3THW1              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for G3THW1 as seed ortholog is 98%.

Group of orthologs #66. Best score 225 bits
Score difference with first non-orthologous sequence - C.trachomatis:225 L.africana:225

O84296              	100.00%		G3SZS9              	100.00%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for G3SZS9 as seed ortholog is 100%.

Group of orthologs #67. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 L.africana:223

O84028              	100.00%		G3T8K8              	100.00%
Bootstrap support for O84028 as seed ortholog is 99%.
Bootstrap support for G3T8K8 as seed ortholog is 100%.

Group of orthologs #68. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:223 L.africana:223

O84562              	100.00%		G3T8M3              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for G3T8M3 as seed ortholog is 100%.

Group of orthologs #69. Best score 221 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 L.africana:221

O84406              	100.00%		G3T795              	100.00%
                    	       		G3TCP3              	56.56%
                    	       		G3SU05              	32.06%
                    	       		G3TJD0              	29.50%
                    	       		G3SN01              	27.53%
                    	       		G3TIR6              	22.30%
                    	       		G3UH38              	16.03%
Bootstrap support for O84406 as seed ortholog is 100%.
Bootstrap support for G3T795 as seed ortholog is 100%.

Group of orthologs #70. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 L.africana:220

O84613              	100.00%		G3TBF5              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for G3TBF5 as seed ortholog is 100%.

Group of orthologs #71. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 L.africana:218

O84081              	100.00%		G3TD24              	100.00%
                    	       		G3T0S3              	50.00%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for G3TD24 as seed ortholog is 100%.

Group of orthologs #72. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 L.africana:37

O84345              	100.00%		G3TMU9              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for G3TMU9 as seed ortholog is 86%.

Group of orthologs #73. Best score 215 bits
Score difference with first non-orthologous sequence - C.trachomatis:215 L.africana:215

O84065              	100.00%		G3TIR4              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for G3TIR4 as seed ortholog is 100%.

Group of orthologs #74. Best score 210 bits
Score difference with first non-orthologous sequence - C.trachomatis:210 L.africana:210

O84266              	100.00%		G3SZC7              	100.00%
                    	       		G3SRY2              	18.59%
                    	       		G3UDM5              	15.55%
                    	       		G3TSA6              	14.45%
                    	       		G3T2H7              	11.80%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for G3SZC7 as seed ortholog is 100%.

Group of orthologs #75. Best score 204 bits
Score difference with first non-orthologous sequence - C.trachomatis:204 L.africana:204

O84596              	100.00%		G3TKK9              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for G3TKK9 as seed ortholog is 100%.

Group of orthologs #76. Best score 202 bits
Score difference with first non-orthologous sequence - C.trachomatis:202 L.africana:202

O84704              	100.00%		G3TCC8              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for G3TCC8 as seed ortholog is 100%.

Group of orthologs #77. Best score 199 bits
Score difference with first non-orthologous sequence - C.trachomatis:199 L.africana:199

O84812              	100.00%		G3SXF1              	100.00%
                    	       		G3SN96              	18.10%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for G3SXF1 as seed ortholog is 100%.

Group of orthologs #78. Best score 195 bits
Score difference with first non-orthologous sequence - C.trachomatis:195 L.africana:195

O84196              	100.00%		G3TLJ2              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for G3TLJ2 as seed ortholog is 100%.

Group of orthologs #79. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 L.africana:191

O84859              	100.00%		G3TEU7              	100.00%
                    	       		G3T2Q1              	7.37%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for G3TEU7 as seed ortholog is 100%.

Group of orthologs #80. Best score 190 bits
Score difference with first non-orthologous sequence - C.trachomatis:190 L.africana:190

O84289              	100.00%		G3SVL8              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for G3SVL8 as seed ortholog is 100%.

Group of orthologs #81. Best score 189 bits
Score difference with first non-orthologous sequence - C.trachomatis:189 L.africana:82

O84247              	100.00%		G3T1X0              	100.00%
                    	       		G3UH91              	73.20%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for G3T1X0 as seed ortholog is 98%.

Group of orthologs #82. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 L.africana:184

O84402              	100.00%		G3T351              	100.00%
                    	       		G3SZ07              	21.16%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for G3T351 as seed ortholog is 100%.

Group of orthologs #83. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 L.africana:30

P38004              	100.00%		G3TGN9              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for G3TGN9 as seed ortholog is 82%.

Group of orthologs #84. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 L.africana:183

O84638              	100.00%		G3T0F6              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for G3T0F6 as seed ortholog is 100%.

Group of orthologs #85. Best score 183 bits
Score difference with first non-orthologous sequence - C.trachomatis:183 L.africana:183

O84874              	100.00%		G3SZS5              	100.00%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for G3SZS5 as seed ortholog is 100%.

Group of orthologs #86. Best score 181 bits
Score difference with first non-orthologous sequence - C.trachomatis:181 L.africana:85

O84608              	100.00%		G3U6J5              	100.00%
                    	       		G3SQZ1              	27.41%
                    	       		G3TIT8              	25.95%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for G3U6J5 as seed ortholog is 99%.

Group of orthologs #87. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 L.africana:177

O84755              	100.00%		G3U8Y2              	100.00%
                    	       		G3SVN1              	75.72%
                    	       		G3SW08              	59.96%
Bootstrap support for O84755 as seed ortholog is 95%.
Bootstrap support for G3U8Y2 as seed ortholog is 100%.

Group of orthologs #88. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 L.africana:176

P18584              	100.00%		G3T0A5              	100.00%
                    	       		G3SPG4              	30.72%
                    	       		G3TKN6              	19.97%
Bootstrap support for P18584 as seed ortholog is 100%.
Bootstrap support for G3T0A5 as seed ortholog is 100%.

Group of orthologs #89. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 L.africana:175

O84332              	100.00%		G3TRV5              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for G3TRV5 as seed ortholog is 100%.

Group of orthologs #90. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:168 L.africana:36

O84676              	100.00%		G3TSV8              	100.00%
O84722              	11.82%		
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for G3TSV8 as seed ortholog is 83%.

Group of orthologs #91. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 L.africana:168

O84712              	100.00%		G3UL99              	100.00%
Bootstrap support for O84712 as seed ortholog is 95%.
Bootstrap support for G3UL99 as seed ortholog is 100%.

Group of orthologs #92. Best score 165 bits
Score difference with first non-orthologous sequence - C.trachomatis:165 L.africana:114

O84456              	100.00%		G3TJ24              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for G3TJ24 as seed ortholog is 99%.

Group of orthologs #93. Best score 162 bits
Score difference with first non-orthologous sequence - C.trachomatis:162 L.africana:162

O84098              	100.00%		G3SXR8              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for G3SXR8 as seed ortholog is 100%.

Group of orthologs #94. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 L.africana:160

O84720              	100.00%		G3SZY6              	100.00%
                    	       		G3T4Q5              	40.04%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for G3SZY6 as seed ortholog is 100%.

Group of orthologs #95. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 L.africana:158

O84055              	100.00%		G3SZA9              	100.00%
Bootstrap support for O84055 as seed ortholog is 99%.
Bootstrap support for G3SZA9 as seed ortholog is 100%.

Group of orthologs #96. Best score 155 bits
Score difference with first non-orthologous sequence - C.trachomatis:155 L.africana:155

O84734              	100.00%		G3TIA7              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for G3TIA7 as seed ortholog is 100%.

Group of orthologs #97. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 L.africana:154

O84260              	100.00%		G3T5I7              	100.00%
                    	       		G3TVA4              	51.81%
                    	       		G3TA83              	7.25%
Bootstrap support for O84260 as seed ortholog is 88%.
Bootstrap support for G3T5I7 as seed ortholog is 100%.

Group of orthologs #98. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 L.africana:49

O84200              	100.00%		G3T0L3              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for G3T0L3 as seed ortholog is 89%.

Group of orthologs #99. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 L.africana:154

O84632              	100.00%		G3TMQ6              	100.00%
Bootstrap support for O84632 as seed ortholog is 100%.
Bootstrap support for G3TMQ6 as seed ortholog is 100%.

Group of orthologs #100. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 L.africana:153

O84579              	100.00%		G3U1V3              	100.00%
Bootstrap support for O84579 as seed ortholog is 100%.
Bootstrap support for G3U1V3 as seed ortholog is 100%.

Group of orthologs #101. Best score 150 bits
Score difference with first non-orthologous sequence - C.trachomatis:150 L.africana:150

O84727              	100.00%		G3T197              	100.00%
                    	       		G3UBH6              	39.47%
                    	       		G3UC14              	17.63%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for G3T197 as seed ortholog is 100%.

Group of orthologs #102. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 L.africana:145

O84752              	100.00%		G3SML8              	100.00%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for G3SML8 as seed ortholog is 100%.

Group of orthologs #103. Best score 140 bits
Score difference with first non-orthologous sequence - C.trachomatis:140 L.africana:140

O84234              	100.00%		G3T880              	100.00%
                    	       		G3TEH6              	39.79%
                    	       		G3SL60              	37.39%
                    	       		G3TC61              	33.48%
                    	       		G3TP03              	32.15%
                    	       		G3T8X5              	30.46%
                    	       		G3TEK0              	30.02%
                    	       		G3TH49              	29.84%
                    	       		G3T8W3              	28.95%
                    	       		G3SRL3              	25.84%
                    	       		G3UG55              	24.33%
                    	       		G3TZA1              	19.98%
                    	       		G3SXD0              	17.94%
                    	       		G3SXG5              	17.85%
                    	       		G3SW72              	17.23%
                    	       		G3SY25              	16.25%
                    	       		G3T9F2              	14.83%
                    	       		G3UMS9              	12.08%
                    	       		G3T886              	9.24%
Bootstrap support for O84234 as seed ortholog is 100%.
Bootstrap support for G3T880 as seed ortholog is 100%.

Group of orthologs #104. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 L.africana:136

O84123              	100.00%		G3TP55              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for G3TP55 as seed ortholog is 100%.

Group of orthologs #105. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 L.africana:135

O84771              	100.00%		G3THS6              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for G3THS6 as seed ortholog is 100%.

Group of orthologs #106. Best score 133 bits
Score difference with first non-orthologous sequence - C.trachomatis:133 L.africana:77

O84732              	100.00%		G3UFC6              	100.00%
                    	       		G3U2Y8              	85.39%
                    	       		G3TFP1              	60.75%
                    	       		G3SLT7              	60.49%
                    	       		G3SLT9              	57.78%
                    	       		G3TY16              	56.68%
                    	       		G3TZL1              	55.85%
                    	       		G3TVH2              	44.57%
                    	       		G3T9D5              	11.53%
                    	       		G3TIF4              	11.12%
                    	       		G3TEZ5              	10.96%
                    	       		G3THI2              	10.59%
                    	       		G3TIG8              	10.59%
                    	       		G3TEQ6              	9.34%
                    	       		G3T9E8              	8.92%
                    	       		G3U4A8              	7.10%
                    	       		G3TTA2              	5.22%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for G3UFC6 as seed ortholog is 89%.

Group of orthologs #107. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 L.africana:129

O84835              	100.00%		G3TDU0              	100.00%
                    	       		G3UAC1              	100.00%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for G3TDU0 as seed ortholog is 100%.
Bootstrap support for G3UAC1 as seed ortholog is 100%.

Group of orthologs #108. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 L.africana:128

O84864              	100.00%		G3SY72              	100.00%
                    	       		G3T5S4              	5.53%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for G3SY72 as seed ortholog is 100%.

Group of orthologs #109. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 L.africana:128

O84274              	100.00%		G3TDM7              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for G3TDM7 as seed ortholog is 100%.

Group of orthologs #110. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 L.africana:128

O84589              	100.00%		G3TKU7              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for G3TKU7 as seed ortholog is 100%.

Group of orthologs #111. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 L.africana:126

O84492              	100.00%		G3UA63              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for G3UA63 as seed ortholog is 100%.

Group of orthologs #112. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 L.africana:124

O84649              	100.00%		G3SN49              	100.00%
                    	       		G3TL95              	14.20%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for G3SN49 as seed ortholog is 100%.

Group of orthologs #113. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 L.africana:124

O84033              	100.00%		G3U270              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for G3U270 as seed ortholog is 100%.

Group of orthologs #114. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 L.africana:123

O84391              	100.00%		G3TK08              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for G3TK08 as seed ortholog is 100%.

Group of orthologs #115. Best score 122 bits
Score difference with first non-orthologous sequence - C.trachomatis:122 L.africana:122

O84241              	100.00%		G3TP59              	100.00%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for G3TP59 as seed ortholog is 100%.

Group of orthologs #116. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 L.africana:33

O84130              	100.00%		G3SVV8              	100.00%
                    	       		G3T167              	8.52%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for G3SVV8 as seed ortholog is 83%.

Group of orthologs #117. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 L.africana:42

O84599              	100.00%		G3T8Z8              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for G3T8Z8 as seed ortholog is 88%.

Group of orthologs #118. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 L.africana:32

O84508              	100.00%		G3T0M2              	100.00%
                    	       		G3T687              	25.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for G3T0M2 as seed ortholog is 93%.

Group of orthologs #119. Best score 115 bits
Score difference with first non-orthologous sequence - C.trachomatis:115 L.africana:115

O84710              	100.00%		G3TPW1              	100.00%
O84415              	6.03%		
Bootstrap support for O84710 as seed ortholog is 100%.
Bootstrap support for G3TPW1 as seed ortholog is 100%.

Group of orthologs #120. Best score 113 bits
Score difference with first non-orthologous sequence - C.trachomatis:113 L.africana:113

O84478              	100.00%		G3TJX7              	100.00%
Bootstrap support for O84478 as seed ortholog is 100%.
Bootstrap support for G3TJX7 as seed ortholog is 100%.

Group of orthologs #121. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 L.africana:48

O84096              	100.00%		G3TF65              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for G3TF65 as seed ortholog is 88%.

Group of orthologs #122. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 L.africana:109

O84463              	100.00%		G3T557              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for G3T557 as seed ortholog is 100%.

Group of orthologs #123. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 L.africana:108

O84719              	100.00%		G3SM39              	100.00%
                    	       		G3TCD9              	68.96%
                    	       		G3UHX1              	67.45%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for G3SM39 as seed ortholog is 100%.

Group of orthologs #124. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 L.africana:18

O84358              	100.00%		G3STM6              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for G3STM6 as seed ortholog is 66%.
Alternative seed ortholog is G3TCG6 (18 bits away from this cluster)

Group of orthologs #125. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 L.africana:11

O84843              	100.00%		G5E6X3              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for G5E6X3 as seed ortholog is 57%.
Alternative seed ortholog is G3TGF8 (11 bits away from this cluster)

Group of orthologs #126. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 L.africana:102

P55137              	100.00%		G3TPA2              	100.00%
                    	       		G3SNR9              	18.53%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for G3TPA2 as seed ortholog is 100%.

Group of orthologs #127. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 L.africana:102

O84215              	100.00%		G3SUE0              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for G3SUE0 as seed ortholog is 100%.

Group of orthologs #128. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 L.africana:100

O84851              	100.00%		G3T9Q1              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for G3T9Q1 as seed ortholog is 100%.

Group of orthologs #129. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 L.africana:52

P0CE06              	100.00%		G3SRB0              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for G3SRB0 as seed ortholog is 96%.

Group of orthologs #130. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 L.africana:97

O84390              	100.00%		G3TEB8              	100.00%
                    	       		G3U9K7              	19.03%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for G3TEB8 as seed ortholog is 100%.

Group of orthologs #131. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 L.africana:19

O84469              	100.00%		G3TBS4              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for G3TBS4 as seed ortholog is 68%.
Alternative seed ortholog is G3SLW6 (19 bits away from this cluster)

Group of orthologs #132. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 L.africana:94

O84301              	100.00%		G3TL32              	100.00%
Bootstrap support for O84301 as seed ortholog is 100%.
Bootstrap support for G3TL32 as seed ortholog is 100%.

Group of orthologs #133. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 L.africana:44

P0CE03              	100.00%		G3TWY4              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for G3TWY4 as seed ortholog is 98%.

Group of orthologs #134. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 L.africana:92

O84680              	100.00%		G3SVS5              	100.00%
                    	       		G3SL66              	43.96%
                    	       		G3TH09              	40.43%
                    	       		G3TBT2              	34.74%
                    	       		G3TMN6              	20.39%
                    	       		G3SYI8              	19.13%
                    	       		G3TNN2              	18.00%
                    	       		G3T2G3              	16.06%
                    	       		G5E7A9              	15.95%
                    	       		G3SUT8              	15.38%
                    	       		G3TJA3              	14.81%
                    	       		G3SUE2              	13.78%
                    	       		G3SLI9              	13.10%
                    	       		G3TYC3              	12.98%
                    	       		G3UEE3              	11.50%
                    	       		G3T5G2              	11.28%
                    	       		G3TID1              	9.79%
                    	       		G3TA39              	9.79%
                    	       		G3TWS6              	9.57%
                    	       		G3THW8              	9.11%
                    	       		G3TJT9              	9.11%
                    	       		G3SYD5              	8.43%
                    	       		G3TXG9              	8.31%
                    	       		G3U4Q9              	8.31%
                    	       		G3SRC6              	8.20%
                    	       		G3TYJ8              	7.97%
                    	       		G3T8I7              	7.52%
                    	       		G3T2S5              	7.29%
                    	       		G3SXV0              	7.18%
                    	       		G3SYM5              	6.83%
                    	       		G3TCW7              	6.72%
                    	       		G3T1Q4              	6.38%
                    	       		G3SPN3              	6.26%
                    	       		G3UBC4              	5.58%
                    	       		G3TUL9              	5.47%
                    	       		G3UFT8              	5.35%
                    	       		G3TRT6              	5.13%
                    	       		G3TSR3              	5.01%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for G3SVS5 as seed ortholog is 100%.

Group of orthologs #135. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 L.africana:92

O84350              	100.00%		G3SNR3              	100.00%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for G3SNR3 as seed ortholog is 100%.

Group of orthologs #136. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 L.africana:46

O84435              	100.00%		G3SYJ5              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for G3SYJ5 as seed ortholog is 92%.

Group of orthologs #137. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 L.africana:91

O84750              	100.00%		G3TRE5              	100.00%
Bootstrap support for O84750 as seed ortholog is 100%.
Bootstrap support for G3TRE5 as seed ortholog is 100%.

Group of orthologs #138. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 L.africana:89

O84321              	100.00%		G3T6Y3              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for G3T6Y3 as seed ortholog is 100%.

Group of orthologs #139. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 L.africana:89

O84686              	100.00%		G3TEL9              	100.00%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for G3TEL9 as seed ortholog is 100%.

Group of orthologs #140. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 L.africana:87

O84782              	100.00%		G3TAY1              	100.00%
                    	       		G3U248              	71.65%
                    	       		G3TS41              	9.45%
                    	       		G3T8D8              	8.57%
                    	       		G3SRI3              	5.71%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for G3TAY1 as seed ortholog is 100%.

Group of orthologs #141. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 L.africana:87

O84687              	100.00%		G3TQ92              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for G3TQ92 as seed ortholog is 100%.

Group of orthologs #142. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 L.africana:85

O84535              	100.00%		G3SZ89              	100.00%
Bootstrap support for O84535 as seed ortholog is 100%.
Bootstrap support for G3SZ89 as seed ortholog is 100%.

Group of orthologs #143. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 L.africana:83

O84212              	100.00%		G3T299              	100.00%
                    	       		G3SN53              	56.68%
                    	       		G3T8Q4              	21.98%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for G3T299 as seed ortholog is 100%.

Group of orthologs #144. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 L.africana:83

O84547              	100.00%		G3T1B4              	100.00%
                    	       		G3TL50              	72.82%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for G3T1B4 as seed ortholog is 100%.

Group of orthologs #145. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 L.africana:82

O84294              	100.00%		G3SVA3              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for G3SVA3 as seed ortholog is 100%.

Group of orthologs #146. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 L.africana:82

O84595              	100.00%		G3TKW5              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for G3TKW5 as seed ortholog is 100%.

Group of orthologs #147. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 L.africana:80

O84189              	100.00%		G3SN00              	100.00%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for G3SN00 as seed ortholog is 100%.

Group of orthologs #148. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 L.africana:78

P36424              	100.00%		G3SQS3              	100.00%
                    	       		G3SYA1              	23.80%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for G3SQS3 as seed ortholog is 100%.

Group of orthologs #149. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 L.africana:78

O84611              	100.00%		G3SRI7              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for G3SRI7 as seed ortholog is 100%.

Group of orthologs #150. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 L.africana:78

O84533              	100.00%		G3T8X3              	100.00%
Bootstrap support for O84533 as seed ortholog is 100%.
Bootstrap support for G3T8X3 as seed ortholog is 100%.

Group of orthologs #151. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 L.africana:77

O84499              	100.00%		G3SV39              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for G3SV39 as seed ortholog is 100%.

Group of orthologs #152. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 L.africana:77

O84468              	100.00%		G3TLU9              	100.00%
Bootstrap support for O84468 as seed ortholog is 100%.
Bootstrap support for G3TLU9 as seed ortholog is 100%.

Group of orthologs #153. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 L.africana:13

O84544              	100.00%		G3TPH5              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for G3TPH5 as seed ortholog is 79%.

Group of orthologs #154. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 L.africana:76

O84684              	100.00%		G3T8V1              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for G3T8V1 as seed ortholog is 100%.

Group of orthologs #155. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 L.africana:76

O84806              	100.00%		G3TNU0              	100.00%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for G3TNU0 as seed ortholog is 100%.

Group of orthologs #156. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 L.africana:76

O84027              	100.00%		G3U0T2              	100.00%
Bootstrap support for O84027 as seed ortholog is 100%.
Bootstrap support for G3U0T2 as seed ortholog is 100%.

Group of orthologs #157. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 L.africana:76

P0CD79              	100.00%		G3U0I9              	100.00%
Bootstrap support for P0CD79 as seed ortholog is 100%.
Bootstrap support for G3U0I9 as seed ortholog is 100%.

Group of orthologs #158. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 L.africana:75

O84792              	100.00%		G3TAB9              	100.00%
Bootstrap support for O84792 as seed ortholog is 100%.
Bootstrap support for G3TAB9 as seed ortholog is 100%.

Group of orthologs #159. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 L.africana:75

O84357              	100.00%		G3UL38              	100.00%
Bootstrap support for O84357 as seed ortholog is 100%.
Bootstrap support for G3UL38 as seed ortholog is 100%.

Group of orthologs #160. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 L.africana:74

O84665              	100.00%		G3SVS0              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for G3SVS0 as seed ortholog is 100%.

Group of orthologs #161. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 L.africana:73

O84650              	100.00%		G3TDI2              	100.00%
                    	       		G3SMP5              	5.06%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for G3TDI2 as seed ortholog is 100%.

Group of orthologs #162. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 L.africana:73

O84108              	100.00%		G3SPV3              	100.00%
Bootstrap support for O84108 as seed ortholog is 100%.
Bootstrap support for G3SPV3 as seed ortholog is 100%.

Group of orthologs #163. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 L.africana:72

O84338              	100.00%		G3T757              	100.00%
                    	       		G3TS43              	67.56%
                    	       		G3TY28              	25.08%
                    	       		G3T5W7              	24.25%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for G3T757 as seed ortholog is 100%.

Group of orthologs #164. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 L.africana:72

O84578              	100.00%		G3TPN1              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for G3TPN1 as seed ortholog is 100%.

Group of orthologs #165. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.africana:71

O84366              	100.00%		G3T613              	100.00%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for G3T613 as seed ortholog is 100%.

Group of orthologs #166. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.africana:71

O84139              	100.00%		G3TJ39              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for G3TJ39 as seed ortholog is 100%.

Group of orthologs #167. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 L.africana:28

O84781              	100.00%		G3TT49              	100.00%
                    	       		G3SZX1              	63.47%
                    	       		G3T184              	57.68%
                    	       		G3SNX6              	16.80%
                    	       		G3TMX1              	15.87%
                    	       		G3SYN7              	7.36%
                    	       		G3SSD3              	6.50%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for G3TT49 as seed ortholog is 72%.
Alternative seed ortholog is G3SUV0 (28 bits away from this cluster)

Group of orthologs #168. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 L.africana:70

O84530              	100.00%		G3U814              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for G3U814 as seed ortholog is 100%.

Group of orthologs #169. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 L.africana:69

O84703              	100.00%		G3TF42              	100.00%
Bootstrap support for O84703 as seed ortholog is 100%.
Bootstrap support for G3TF42 as seed ortholog is 100%.

Group of orthologs #170. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 L.africana:68

O84842              	100.00%		G3T642              	100.00%
Bootstrap support for O84842 as seed ortholog is 100%.
Bootstrap support for G3T642 as seed ortholog is 100%.

Group of orthologs #171. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 L.africana:18

P0CD81              	100.00%		G3U4H9              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for G3U4H9 as seed ortholog is 77%.

Group of orthologs #172. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 L.africana:67

O84127              	100.00%		G3TAG3              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for G3TAG3 as seed ortholog is 100%.

Group of orthologs #173. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.africana:17

O84395              	100.00%		G3SLP7              	100.00%
                    	       		G3TMJ8              	43.78%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for G3SLP7 as seed ortholog is 64%.
Alternative seed ortholog is G3UK19 (17 bits away from this cluster)

Group of orthologs #174. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.africana:66

P0C0Z8              	100.00%		G3SL10              	100.00%
                    	       		G3UCF8              	93.28%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for G3SL10 as seed ortholog is 100%.

Group of orthologs #175. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 L.africana:65

O84284              	100.00%		G3TFF7              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for G3TFF7 as seed ortholog is 100%.

Group of orthologs #176. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 L.africana:64

P26623              	100.00%		G3T326              	100.00%
                    	       		G3STT6              	18.18%
                    	       		G3SZC5              	17.73%
                    	       		G3U226              	15.00%
                    	       		G3TGL9              	14.55%
                    	       		G3SSN6              	13.64%
                    	       		G3SVR2              	10.91%
Bootstrap support for P26623 as seed ortholog is 100%.
Bootstrap support for G3T326 as seed ortholog is 100%.

Group of orthologs #177. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 L.africana:64

P0CD84              	100.00%		G3SV19              	100.00%
Bootstrap support for P0CD84 as seed ortholog is 100%.
Bootstrap support for G3SV19 as seed ortholog is 100%.

Group of orthologs #178. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 L.africana:63

O84128              	100.00%		G3SNR5              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for G3SNR5 as seed ortholog is 100%.

Group of orthologs #179. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 L.africana:62

O84557              	100.00%		G3UAE5              	100.00%
                    	       		G3T9B6              	14.61%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for G3UAE5 as seed ortholog is 100%.

Group of orthologs #180. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 L.africana:6

O84633              	100.00%		G3TJX3              	100.00%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for G3TJX3 as seed ortholog is 53%.
Alternative seed ortholog is G3T8N2 (6 bits away from this cluster)

Group of orthologs #181. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 L.africana:61

P0CD83              	100.00%		G3SNN0              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for G3SNN0 as seed ortholog is 100%.

Group of orthologs #182. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 L.africana:60

O84221              	100.00%		G3SN39              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for G3SN39 as seed ortholog is 100%.

Group of orthologs #183. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 L.africana:9

O84822              	100.00%		G3SV06              	100.00%
                    	       		G3U0B4              	55.96%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for G3SV06 as seed ortholog is 54%.
Alternative seed ortholog is G3SVM6 (9 bits away from this cluster)

Group of orthologs #184. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 L.africana:59

O84532              	100.00%		G3TF06              	100.00%
Bootstrap support for O84532 as seed ortholog is 100%.
Bootstrap support for G3TF06 as seed ortholog is 100%.

Group of orthologs #185. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 L.africana:58

P66123              	100.00%		G3TKH0              	100.00%
Bootstrap support for P66123 as seed ortholog is 100%.
Bootstrap support for G3TKH0 as seed ortholog is 100%.

Group of orthologs #186. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.africana:57

O84218              	100.00%		G3SRA3              	100.00%
                    	       		G3STN3              	100.00%
                    	       		G3TJ77              	46.42%
                    	       		G3TZ12              	45.60%
                    	       		G3TIW6              	40.52%
                    	       		G3T2C1              	37.45%
                    	       		G3TTT3              	32.23%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for G3SRA3 as seed ortholog is 100%.
Bootstrap support for G3STN3 as seed ortholog is 100%.

Group of orthologs #187. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.africana:57

O84029              	100.00%		G3TQ71              	100.00%
Bootstrap support for O84029 as seed ortholog is 100%.
Bootstrap support for G3TQ71 as seed ortholog is 100%.

Group of orthologs #188. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 L.africana:56

P0CE02              	100.00%		G3SQL6              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for G3SQL6 as seed ortholog is 100%.

Group of orthologs #189. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 L.africana:56

O84527              	100.00%		G3STZ9              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for G3STZ9 as seed ortholog is 100%.

Group of orthologs #190. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 L.africana:55

P66480              	100.00%		G3T2F0              	100.00%
                    	       		G3UDR1              	32.22%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for G3T2F0 as seed ortholog is 100%.

Group of orthologs #191. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 L.africana:54

O84689              	100.00%		G3SW77              	100.00%
Bootstrap support for O84689 as seed ortholog is 100%.
Bootstrap support for G3SW77 as seed ortholog is 100%.

Group of orthologs #192. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 L.africana:54

O84032              	100.00%		G3TFE9              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for G3TFE9 as seed ortholog is 100%.

Group of orthologs #193. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 L.africana:51

O84459              	100.00%		G3TNK6              	100.00%
                    	       		G3T6D7              	41.82%
Bootstrap support for O84459 as seed ortholog is 100%.
Bootstrap support for G3TNK6 as seed ortholog is 100%.

Group of orthologs #194. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 L.africana:51

O84618              	100.00%		G3UJS8              	100.00%
Bootstrap support for O84618 as seed ortholog is 100%.
Bootstrap support for G3UJS8 as seed ortholog is 100%.

Group of orthologs #195. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 L.africana:50

P0CD80              	100.00%		G3T477              	100.00%
                    	       		G3T2F7              	45.48%
                    	       		G3SSA5              	7.10%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for G3T477 as seed ortholog is 100%.

Group of orthologs #196. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 L.africana:50

O84776              	100.00%		G3T944              	100.00%
Bootstrap support for O84776 as seed ortholog is 100%.
Bootstrap support for G3T944 as seed ortholog is 100%.

Group of orthologs #197. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 L.africana:50

O84658              	100.00%		G3TX55              	100.00%
Bootstrap support for O84658 as seed ortholog is 100%.
Bootstrap support for G3TX55 as seed ortholog is 100%.

Group of orthologs #198. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 L.africana:49

O84320              	100.00%		G3T7I1              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for G3T7I1 as seed ortholog is 100%.

Group of orthologs #199. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 L.africana:47

O84655              	100.00%		G3T1C1              	100.00%
Bootstrap support for O84655 as seed ortholog is 100%.
Bootstrap support for G3T1C1 as seed ortholog is 100%.

Group of orthologs #200. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 L.africana:47

O84219              	100.00%		G3TBB5              	100.00%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for G3TBB5 as seed ortholog is 100%.

Group of orthologs #201. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 L.africana:46

P0CE04              	100.00%		G3UMR5              	100.00%
                    	       		G3U5D7              	28.29%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for G3UMR5 as seed ortholog is 100%.

Group of orthologs #202. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 L.africana:44

O84808              	100.00%		G3SMW4              	100.00%
Bootstrap support for O84808 as seed ortholog is 100%.
Bootstrap support for G3SMW4 as seed ortholog is 100%.

Group of orthologs #203. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 L.africana:43

O84778              	100.00%		G3T8Q0              	100.00%
Bootstrap support for O84778 as seed ortholog is 100%.
Bootstrap support for G3T8Q0 as seed ortholog is 100%.

Group of orthologs #204. Best score 41 bits
Score difference with first non-orthologous sequence - C.trachomatis:41 L.africana:41

O84263              	100.00%		G3UK51              	100.00%
O84541              	14.48%		
Bootstrap support for O84263 as seed ortholog is 100%.
Bootstrap support for G3UK51 as seed ortholog is 100%.

Group of orthologs #205. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 L.africana:40

O84151              	100.00%		G3T6F8              	100.00%
O84209              	7.10%		
Bootstrap support for O84151 as seed ortholog is 100%.
Bootstrap support for G3T6F8 as seed ortholog is 100%.