###################################
131 groups of orthologs
138 in-paralogs from C.trachomatis
156 in-paralogs from K.cryptofilum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 599 bits
Score difference with first non-orthologous sequence - C.trachomatis:599 K.cryptofilum:599

O84022              	100.00%		B1L666              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for B1L666 as seed ortholog is 100%.

Group of orthologs #2. Best score 475 bits
Score difference with first non-orthologous sequence - C.trachomatis:475 K.cryptofilum:407

O84585              	100.00%		B1L5F5              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for B1L5F5 as seed ortholog is 100%.

Group of orthologs #3. Best score 416 bits
Score difference with first non-orthologous sequence - C.trachomatis:416 K.cryptofilum:416

Q59321              	100.00%		B1L630              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for B1L630 as seed ortholog is 100%.

Group of orthologs #4. Best score 414 bits
Score difference with first non-orthologous sequence - C.trachomatis:414 K.cryptofilum:414

O84207              	100.00%		B1L4A4              	100.00%
Bootstrap support for O84207 as seed ortholog is 100%.
Bootstrap support for B1L4A4 as seed ortholog is 100%.

Group of orthologs #5. Best score 375 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 K.cryptofilum:375

O84310              	100.00%		B1L6G7              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for B1L6G7 as seed ortholog is 100%.

Group of orthologs #6. Best score 363 bits
Score difference with first non-orthologous sequence - C.trachomatis:363 K.cryptofilum:235

O84823              	100.00%		B1L733              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for B1L733 as seed ortholog is 100%.

Group of orthologs #7. Best score 361 bits
Score difference with first non-orthologous sequence - C.trachomatis:361 K.cryptofilum:361

O84591              	100.00%		B1L7C2              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for B1L7C2 as seed ortholog is 100%.

Group of orthologs #8. Best score 324 bits
Score difference with first non-orthologous sequence - C.trachomatis:324 K.cryptofilum:324

O84035              	100.00%		B1L7J9              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for B1L7J9 as seed ortholog is 100%.

Group of orthologs #9. Best score 288 bits
Score difference with first non-orthologous sequence - C.trachomatis:288 K.cryptofilum:288

P0CE09              	100.00%		B1L740              	100.00%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for B1L740 as seed ortholog is 100%.

Group of orthologs #10. Best score 285 bits
Score difference with first non-orthologous sequence - C.trachomatis:285 K.cryptofilum:285

O84787              	100.00%		B1L5G4              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for B1L5G4 as seed ortholog is 100%.

Group of orthologs #11. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 K.cryptofilum:219

O84829              	100.00%		B1L6R0              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for B1L6R0 as seed ortholog is 100%.

Group of orthologs #12. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 K.cryptofilum:277

O84834              	100.00%		B1L7R7              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for B1L7R7 as seed ortholog is 100%.

Group of orthologs #13. Best score 262 bits
Score difference with first non-orthologous sequence - C.trachomatis:262 K.cryptofilum:262

P0CE13              	100.00%		B1L3G1              	100.00%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for B1L3G1 as seed ortholog is 100%.

Group of orthologs #14. Best score 257 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 K.cryptofilum:257

O84309              	100.00%		B1L6G8              	100.00%
Bootstrap support for O84309 as seed ortholog is 99%.
Bootstrap support for B1L6G8 as seed ortholog is 100%.

Group of orthologs #15. Best score 257 bits
Score difference with first non-orthologous sequence - C.trachomatis:257 K.cryptofilum:257

O84304              	100.00%		B1L6Q6              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for B1L6Q6 as seed ortholog is 100%.

Group of orthologs #16. Best score 255 bits
Score difference with first non-orthologous sequence - C.trachomatis:255 K.cryptofilum:255

P0CE21              	100.00%		B1L381              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for B1L381 as seed ortholog is 100%.

Group of orthologs #17. Best score 247 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 K.cryptofilum:62

O84696              	100.00%		B1L5E9              	100.00%
                    	       		B1L5W3              	18.42%
                    	       		B1L481              	11.05%
                    	       		B1L5S9              	8.68%
                    	       		B1L5F0              	8.42%
Bootstrap support for O84696 as seed ortholog is 98%.
Bootstrap support for B1L5E9 as seed ortholog is 97%.

Group of orthologs #18. Best score 244 bits
Score difference with first non-orthologous sequence - C.trachomatis:244 K.cryptofilum:108

O84732              	100.00%		B1L487              	100.00%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for B1L487 as seed ortholog is 98%.

Group of orthologs #19. Best score 243 bits
Score difference with first non-orthologous sequence - C.trachomatis:243 K.cryptofilum:243

O84373              	100.00%		B1L5G9              	100.00%
Bootstrap support for O84373 as seed ortholog is 100%.
Bootstrap support for B1L5G9 as seed ortholog is 100%.

Group of orthologs #20. Best score 235 bits
Score difference with first non-orthologous sequence - C.trachomatis:235 K.cryptofilum:235

O84596              	100.00%		B1L635              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for B1L635 as seed ortholog is 100%.

Group of orthologs #21. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 K.cryptofilum:132

O84693              	100.00%		B1L4A3              	100.00%
Bootstrap support for O84693 as seed ortholog is 100%.
Bootstrap support for B1L4A3 as seed ortholog is 99%.

Group of orthologs #22. Best score 231 bits
Score difference with first non-orthologous sequence - C.trachomatis:231 K.cryptofilum:231

O84028              	100.00%		B1L7A6              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for B1L7A6 as seed ortholog is 100%.

Group of orthologs #23. Best score 229 bits
Score difference with first non-orthologous sequence - C.trachomatis:31 K.cryptofilum:229

O84444              	100.00%		B1L7Q0              	100.00%
Bootstrap support for O84444 as seed ortholog is 90%.
Bootstrap support for B1L7Q0 as seed ortholog is 100%.

Group of orthologs #24. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 K.cryptofilum:166

O84087              	100.00%		B1L459              	100.00%
Bootstrap support for O84087 as seed ortholog is 100%.
Bootstrap support for B1L459 as seed ortholog is 100%.

Group of orthologs #25. Best score 224 bits
Score difference with first non-orthologous sequence - C.trachomatis:224 K.cryptofilum:224

O84828              	100.00%		B1L6Q9              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for B1L6Q9 as seed ortholog is 100%.

Group of orthologs #26. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 K.cryptofilum:220

O84734              	100.00%		B1L5G0              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for B1L5G0 as seed ortholog is 100%.

Group of orthologs #27. Best score 219 bits
Score difference with first non-orthologous sequence - C.trachomatis:219 K.cryptofilum:219

O84754              	100.00%		B1L762              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for B1L762 as seed ortholog is 100%.

Group of orthologs #28. Best score 203 bits
Score difference with first non-orthologous sequence - C.trachomatis:203 K.cryptofilum:203

O84316              	100.00%		B1L739              	100.00%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for B1L739 as seed ortholog is 100%.

Group of orthologs #29. Best score 190 bits
Score difference with first non-orthologous sequence - C.trachomatis:190 K.cryptofilum:87

P0CD71              	100.00%		B1L713              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for B1L713 as seed ortholog is 96%.

Group of orthologs #30. Best score 186 bits
Score difference with first non-orthologous sequence - C.trachomatis:186 K.cryptofilum:74

O84212              	100.00%		B1L3Q8              	100.00%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for B1L3Q8 as seed ortholog is 95%.

Group of orthologs #31. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 K.cryptofilum:109

O84101              	100.00%		B1L5S1              	100.00%
Bootstrap support for O84101 as seed ortholog is 99%.
Bootstrap support for B1L5S1 as seed ortholog is 99%.

Group of orthologs #32. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 K.cryptofilum:178

P18584              	100.00%		B1L493              	100.00%
Bootstrap support for P18584 as seed ortholog is 100%.
Bootstrap support for B1L493 as seed ortholog is 100%.

Group of orthologs #33. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 K.cryptofilum:177

O84368              	100.00%		B1L7R5              	100.00%
Bootstrap support for O84368 as seed ortholog is 100%.
Bootstrap support for B1L7R5 as seed ortholog is 100%.

Group of orthologs #34. Best score 174 bits
Score difference with first non-orthologous sequence - C.trachomatis:174 K.cryptofilum:174

O84456              	100.00%		B1L3H6              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for B1L3H6 as seed ortholog is 100%.

Group of orthologs #35. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 K.cryptofilum:173

O84578              	100.00%		B1L581              	100.00%
                    	       		B1L5T7              	5.86%
Bootstrap support for O84578 as seed ortholog is 99%.
Bootstrap support for B1L581 as seed ortholog is 100%.

Group of orthologs #36. Best score 173 bits
Score difference with first non-orthologous sequence - C.trachomatis:173 K.cryptofilum:8

O84649              	100.00%		B1L5U0              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for B1L5U0 as seed ortholog is 54%.
Alternative seed ortholog is B1L3G6 (8 bits away from this cluster)

Group of orthologs #37. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 K.cryptofilum:166

O84211              	100.00%		B1L3G2              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for B1L3G2 as seed ortholog is 100%.

Group of orthologs #38. Best score 165 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 K.cryptofilum:2

P38004              	100.00%		B1L4H4              	100.00%
Bootstrap support for P38004 as seed ortholog is 99%.
Bootstrap support for B1L4H4 as seed ortholog is 53%.
Alternative seed ortholog is B1L4K9 (2 bits away from this cluster)

Group of orthologs #39. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 K.cryptofilum:160

O84439              	100.00%		B1L5K9              	100.00%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for B1L5K9 as seed ortholog is 100%.

Group of orthologs #40. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 K.cryptofilum:154

O84218              	100.00%		B1L476              	100.00%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for B1L476 as seed ortholog is 100%.

Group of orthologs #41. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 K.cryptofilum:13

O84660              	100.00%		B1L7L5              	100.00%
                    	       		B1L518              	26.81%
                    	       		B1L543              	10.73%
Bootstrap support for O84660 as seed ortholog is 99%.
Bootstrap support for B1L7L5 as seed ortholog is 66%.
Alternative seed ortholog is B1L544 (13 bits away from this cluster)

Group of orthologs #42. Best score 146 bits
Score difference with first non-orthologous sequence - C.trachomatis:146 K.cryptofilum:76

O84485              	100.00%		B1L5E7              	100.00%
                    	       		B1L5W1              	17.48%
Bootstrap support for O84485 as seed ortholog is 100%.
Bootstrap support for B1L5E7 as seed ortholog is 91%.

Group of orthologs #43. Best score 146 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 K.cryptofilum:24

O84154              	100.00%		B1L6B2              	100.00%
Bootstrap support for O84154 as seed ortholog is 96%.
Bootstrap support for B1L6B2 as seed ortholog is 84%.

Group of orthologs #44. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 K.cryptofilum:143

O84371              	100.00%		B1L5R5              	100.00%
Bootstrap support for O84371 as seed ortholog is 100%.
Bootstrap support for B1L5R5 as seed ortholog is 100%.

Group of orthologs #45. Best score 141 bits
Score difference with first non-orthologous sequence - C.trachomatis:141 K.cryptofilum:141

O84203              	100.00%		B1L5E8              	100.00%
                    	       		B1L5W2              	19.53%
                    	       		B1L482              	12.79%
Bootstrap support for O84203 as seed ortholog is 100%.
Bootstrap support for B1L5E8 as seed ortholog is 100%.

Group of orthologs #46. Best score 141 bits
Score difference with first non-orthologous sequence - C.trachomatis:141 K.cryptofilum:141

P0CD78              	100.00%		B1L718              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for B1L718 as seed ortholog is 100%.

Group of orthologs #47. Best score 139 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 K.cryptofilum:139

O84822              	100.00%		B1L715              	100.00%
Bootstrap support for O84822 as seed ortholog is 94%.
Bootstrap support for B1L715 as seed ortholog is 100%.

Group of orthologs #48. Best score 133 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 K.cryptofilum:133

O84546              	100.00%		B1L6F2              	100.00%
                    	       		B1L667              	10.22%
Bootstrap support for O84546 as seed ortholog is 96%.
Bootstrap support for B1L6F2 as seed ortholog is 100%.

Group of orthologs #49. Best score 130 bits
Score difference with first non-orthologous sequence - C.trachomatis:130 K.cryptofilum:130

O84350              	100.00%		B1L6X3              	100.00%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for B1L6X3 as seed ortholog is 100%.

Group of orthologs #50. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 K.cryptofilum:46

O84202              	100.00%		B1L483              	100.00%
Bootstrap support for O84202 as seed ortholog is 100%.
Bootstrap support for B1L483 as seed ortholog is 89%.

Group of orthologs #51. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 K.cryptofilum:128

O84130              	100.00%		B1L775              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for B1L775 as seed ortholog is 100%.

Group of orthologs #52. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 K.cryptofilum:125

O84460              	100.00%		B1L3E4              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for B1L3E4 as seed ortholog is 100%.

Group of orthologs #53. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 K.cryptofilum:124

O84367              	100.00%		B1L7E2              	100.00%
Bootstrap support for O84367 as seed ortholog is 100%.
Bootstrap support for B1L7E2 as seed ortholog is 100%.

Group of orthologs #54. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:16 K.cryptofilum:22

O84132              	100.00%		B1L3M2              	100.00%
Bootstrap support for O84132 as seed ortholog is 71%.
Alternative seed ortholog is O84204 (16 bits away from this cluster)
Bootstrap support for B1L3M2 as seed ortholog is 78%.

Group of orthologs #55. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 K.cryptofilum:121

O84395              	100.00%		B1L673              	100.00%
                    	       		B1L5H0              	10.78%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for B1L673 as seed ortholog is 100%.

Group of orthologs #56. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 K.cryptofilum:121

O84172              	100.00%		B1L6B6              	100.00%
Bootstrap support for O84172 as seed ortholog is 100%.
Bootstrap support for B1L6B6 as seed ortholog is 100%.

Group of orthologs #57. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 K.cryptofilum:116

O84383              	100.00%		B1L6F4              	100.00%
Bootstrap support for O84383 as seed ortholog is 100%.
Bootstrap support for B1L6F4 as seed ortholog is 100%.

Group of orthologs #58. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 K.cryptofilum:116

O84200              	100.00%		B1L6Z1              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for B1L6Z1 as seed ortholog is 100%.

Group of orthologs #59. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 K.cryptofilum:116

O84530              	100.00%		B1L707              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for B1L707 as seed ortholog is 100%.

Group of orthologs #60. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 K.cryptofilum:116

O84827              	100.00%		B1L6J7              	100.00%
Bootstrap support for O84827 as seed ortholog is 100%.
Bootstrap support for B1L6J7 as seed ortholog is 100%.

Group of orthologs #61. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 K.cryptofilum:114

O84016              	100.00%		B1L7A0              	100.00%
Bootstrap support for O84016 as seed ortholog is 100%.
Bootstrap support for B1L7A0 as seed ortholog is 100%.

Group of orthologs #62. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 K.cryptofilum:112

O84741              	100.00%		B1L5I6              	100.00%
Bootstrap support for O84741 as seed ortholog is 100%.
Bootstrap support for B1L5I6 as seed ortholog is 100%.

Group of orthologs #63. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 K.cryptofilum:112

P36431              	100.00%		B1L662              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for B1L662 as seed ortholog is 100%.

Group of orthologs #64. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 K.cryptofilum:109

O84131              	100.00%		B1L3M1              	100.00%
Bootstrap support for O84131 as seed ortholog is 100%.
Bootstrap support for B1L3M1 as seed ortholog is 100%.

Group of orthologs #65. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 K.cryptofilum:107

O84599              	100.00%		B1L3E0              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for B1L3E0 as seed ortholog is 100%.

Group of orthologs #66. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:1 K.cryptofilum:14

O84421              	100.00%		B1L3B1              	100.00%
Bootstrap support for O84421 as seed ortholog is 48%.
Alternative seed ortholog is O84071 (1 bits away from this cluster)
Bootstrap support for B1L3B1 as seed ortholog is 65%.
Alternative seed ortholog is B1L5X5 (14 bits away from this cluster)

Group of orthologs #67. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 K.cryptofilum:104

O84201              	100.00%		B1L484              	100.00%
O84178              	12.35%		B1L5E6              	8.03%
Bootstrap support for O84201 as seed ortholog is 100%.
Bootstrap support for B1L484 as seed ortholog is 100%.

Group of orthologs #68. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 K.cryptofilum:104

O84221              	100.00%		B1L460              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for B1L460 as seed ortholog is 100%.

Group of orthologs #69. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 K.cryptofilum:104

O84608              	100.00%		B1L5P9              	100.00%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for B1L5P9 as seed ortholog is 100%.

Group of orthologs #70. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 K.cryptofilum:23

O84352              	100.00%		B1L3X5              	100.00%
                    	       		B1L3R5              	23.49%
                    	       		B1L4P4              	20.07%
                    	       		B1L6P9              	8.26%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for B1L3X5 as seed ortholog is 66%.
Alternative seed ortholog is B1L7K3 (23 bits away from this cluster)

Group of orthologs #71. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 K.cryptofilum:102

O84595              	100.00%		B1L638              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for B1L638 as seed ortholog is 100%.

Group of orthologs #72. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 K.cryptofilum:102

O84843              	100.00%		B1L7B9              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for B1L7B9 as seed ortholog is 100%.

Group of orthologs #73. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 K.cryptofilum:100

O84260              	100.00%		B1L5A6              	100.00%
Bootstrap support for O84260 as seed ortholog is 93%.
Bootstrap support for B1L5A6 as seed ortholog is 100%.

Group of orthologs #74. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 K.cryptofilum:99

P0C0Z7              	100.00%		B1L720              	100.00%
O84609              	11.83%		B1L6H6              	47.35%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for B1L720 as seed ortholog is 100%.

Group of orthologs #75. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 K.cryptofilum:99

O84215              	100.00%		B1L7D5              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for B1L7D5 as seed ortholog is 100%.

Group of orthologs #76. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 K.cryptofilum:97

O84547              	100.00%		B1L6B4              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for B1L6B4 as seed ortholog is 100%.

Group of orthologs #77. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 K.cryptofilum:94

O84139              	100.00%		B1L6Z2              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for B1L6Z2 as seed ortholog is 100%.

Group of orthologs #78. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:29 K.cryptofilum:92

O84690              	100.00%		B1L3V9              	100.00%
Bootstrap support for O84690 as seed ortholog is 80%.
Bootstrap support for B1L3V9 as seed ortholog is 100%.

Group of orthologs #79. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 K.cryptofilum:92

O84782              	100.00%		B1L4K6              	100.00%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for B1L4K6 as seed ortholog is 100%.

Group of orthologs #80. Best score 92 bits
Score difference with first non-orthologous sequence - C.trachomatis:92 K.cryptofilum:92

O84617              	100.00%		B1L553              	100.00%
Bootstrap support for O84617 as seed ortholog is 100%.
Bootstrap support for B1L553 as seed ortholog is 100%.

Group of orthologs #81. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 K.cryptofilum:87

O84096              	100.00%		B1L793              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for B1L793 as seed ortholog is 100%.

Group of orthologs #82. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 K.cryptofilum:86

O84321              	100.00%		B1L6L2              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for B1L6L2 as seed ortholog is 100%.

Group of orthologs #83. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 K.cryptofilum:77

O84128              	100.00%		B1L7A4              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for B1L7A4 as seed ortholog is 100%.

Group of orthologs #84. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 K.cryptofilum:76

O84385              	100.00%		B1L3M4              	100.00%
Bootstrap support for O84385 as seed ortholog is 100%.
Bootstrap support for B1L3M4 as seed ortholog is 100%.

Group of orthologs #85. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 K.cryptofilum:75

O84619              	100.00%		B1L551              	100.00%
Bootstrap support for O84619 as seed ortholog is 100%.
Bootstrap support for B1L551 as seed ortholog is 100%.

Group of orthologs #86. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 K.cryptofilum:75

O84633              	100.00%		B1L6D6              	100.00%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for B1L6D6 as seed ortholog is 100%.

Group of orthologs #87. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 K.cryptofilum:74

O84703              	100.00%		B1L3E5              	100.00%
Bootstrap support for O84703 as seed ortholog is 100%.
Bootstrap support for B1L3E5 as seed ortholog is 100%.

Group of orthologs #88. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 K.cryptofilum:74

O84358              	100.00%		B1L6S3              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for B1L6S3 as seed ortholog is 100%.

Group of orthologs #89. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 K.cryptofilum:72

O84351              	100.00%		B1L3A1              	100.00%
O84872              	8.11%		
Bootstrap support for O84351 as seed ortholog is 100%.
Bootstrap support for B1L3A1 as seed ortholog is 100%.

Group of orthologs #90. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 K.cryptofilum:27

O84589              	100.00%		B1L3N2              	100.00%
                    	       		B1L3V5              	13.78%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for B1L3N2 as seed ortholog is 74%.
Alternative seed ortholog is B1L6L5 (27 bits away from this cluster)

Group of orthologs #91. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 K.cryptofilum:72

O84032              	100.00%		B1L3S7              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for B1L3S7 as seed ortholog is 100%.

Group of orthologs #92. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 K.cryptofilum:70

O84284              	100.00%		B1L6U5              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for B1L6U5 as seed ortholog is 100%.

Group of orthologs #93. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 K.cryptofilum:69

O84094              	100.00%		B1L6P5              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for B1L6P5 as seed ortholog is 100%.

Group of orthologs #94. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 K.cryptofilum:69

O84527              	100.00%		B1L650              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for B1L650 as seed ortholog is 100%.

Group of orthologs #95. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 K.cryptofilum:69

O84042              	100.00%		B1L7R6              	100.00%
Bootstrap support for O84042 as seed ortholog is 100%.
Bootstrap support for B1L7R6 as seed ortholog is 100%.

Group of orthologs #96. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 K.cryptofilum:69

O84778              	100.00%		B1L7M0              	100.00%
Bootstrap support for O84778 as seed ortholog is 100%.
Bootstrap support for B1L7M0 as seed ortholog is 100%.

Group of orthologs #97. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 K.cryptofilum:67

O84073              	100.00%		B1L3B0              	100.00%
Bootstrap support for O84073 as seed ortholog is 100%.
Bootstrap support for B1L3B0 as seed ortholog is 100%.

Group of orthologs #98. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 K.cryptofilum:67

O84375              	100.00%		B1L5V7              	100.00%
Bootstrap support for O84375 as seed ortholog is 100%.
Bootstrap support for B1L5V7 as seed ortholog is 100%.

Group of orthologs #99. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 K.cryptofilum:67

P0CE02              	100.00%		B1L712              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for B1L712 as seed ortholog is 100%.

Group of orthologs #100. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 K.cryptofilum:67

P0CD81              	100.00%		B1L776              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for B1L776 as seed ortholog is 100%.

Group of orthologs #101. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 K.cryptofilum:66

O84320              	100.00%		B1L6L3              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for B1L6L3 as seed ortholog is 100%.

Group of orthologs #102. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 K.cryptofilum:65

O84220              	100.00%		B1L691              	100.00%
Bootstrap support for O84220 as seed ortholog is 100%.
Bootstrap support for B1L691 as seed ortholog is 100%.

Group of orthologs #103. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 K.cryptofilum:65

P0CE03              	100.00%		B1L796              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for B1L796 as seed ortholog is 100%.

Group of orthologs #104. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 K.cryptofilum:65

P28539              	100.00%		B1L789              	100.00%
Bootstrap support for P28539 as seed ortholog is 100%.
Bootstrap support for B1L789 as seed ortholog is 100%.

Group of orthologs #105. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 K.cryptofilum:63

O84584              	100.00%		B1L462              	100.00%
Bootstrap support for O84584 as seed ortholog is 100%.
Bootstrap support for B1L462 as seed ortholog is 100%.

Group of orthologs #106. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 K.cryptofilum:62

O84860              	100.00%		B1L4D5              	100.00%
Bootstrap support for O84860 as seed ortholog is 100%.
Bootstrap support for B1L4D5 as seed ortholog is 100%.

Group of orthologs #107. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 K.cryptofilum:62

O84611              	100.00%		B1L6T7              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for B1L6T7 as seed ortholog is 100%.

Group of orthologs #108. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 K.cryptofilum:61

O84379              	100.00%		B1L3Z7              	100.00%
                    	       		B1L3R1              	69.69%
                    	       		B1L5R7              	9.54%
                    	       		B1L3Q4              	6.08%
                    	       		B1L522              	5.71%
Bootstrap support for O84379 as seed ortholog is 100%.
Bootstrap support for B1L3Z7 as seed ortholog is 100%.

Group of orthologs #109. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 K.cryptofilum:60

O84366              	100.00%		B1L3S1              	100.00%
                    	       		B1L3T8              	17.54%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for B1L3S1 as seed ortholog is 100%.

Group of orthologs #110. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 K.cryptofilum:59

O84557              	100.00%		B1L5U3              	100.00%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for B1L5U3 as seed ortholog is 100%.

Group of orthologs #111. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 K.cryptofilum:59

O84685              	100.00%		B1L5L6              	100.00%
Bootstrap support for O84685 as seed ortholog is 100%.
Bootstrap support for B1L5L6 as seed ortholog is 100%.

Group of orthologs #112. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 K.cryptofilum:59

P0CE01              	100.00%		B1L782              	100.00%
Bootstrap support for P0CE01 as seed ortholog is 100%.
Bootstrap support for B1L782 as seed ortholog is 100%.

Group of orthologs #113. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 K.cryptofilum:58

P66480              	100.00%		B1L708              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for B1L708 as seed ortholog is 100%.

Group of orthologs #114. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 K.cryptofilum:56

P0CD80              	100.00%		B1L679              	100.00%
                    	       		B1L6V3              	10.40%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for B1L679 as seed ortholog is 100%.

Group of orthologs #115. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 K.cryptofilum:54

O84191              	100.00%		B1L676              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for B1L676 as seed ortholog is 100%.

Group of orthologs #116. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 K.cryptofilum:53

O84393              	100.00%		B1L440              	100.00%
Bootstrap support for O84393 as seed ortholog is 100%.
Bootstrap support for B1L440 as seed ortholog is 100%.

Group of orthologs #117. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 K.cryptofilum:53

P0CE05              	100.00%		B1L652              	100.00%
Bootstrap support for P0CE05 as seed ortholog is 100%.
Bootstrap support for B1L652 as seed ortholog is 100%.

Group of orthologs #118. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 K.cryptofilum:52

O84160              	100.00%		B1L3J9              	100.00%
O84159              	20.71%		
O84156              	12.62%		
O84086              	11.43%		
O84157              	5.71%		
Bootstrap support for O84160 as seed ortholog is 100%.
Bootstrap support for B1L3J9 as seed ortholog is 100%.

Group of orthologs #119. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 K.cryptofilum:2

O84863              	100.00%		B1L394              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for B1L394 as seed ortholog is 53%.
Alternative seed ortholog is B1L6M1 (2 bits away from this cluster)

Group of orthologs #120. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 K.cryptofilum:52

P66370              	100.00%		B1L736              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for B1L736 as seed ortholog is 100%.

Group of orthologs #121. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 K.cryptofilum:50

O84219              	100.00%		B1L682              	100.00%
                    	       		B1L3E1              	6.38%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for B1L682 as seed ortholog is 100%.

Group of orthologs #122. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 K.cryptofilum:49

O84435              	100.00%		B1L512              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for B1L512 as seed ortholog is 100%.

Group of orthologs #123. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 K.cryptofilum:48

O84217              	100.00%		B1L3I0              	100.00%
Bootstrap support for O84217 as seed ortholog is 100%.
Bootstrap support for B1L3I0 as seed ortholog is 100%.

Group of orthologs #124. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 K.cryptofilum:48

O84011              	100.00%		B1L614              	100.00%
Bootstrap support for O84011 as seed ortholog is 100%.
Bootstrap support for B1L614 as seed ortholog is 100%.

Group of orthologs #125. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 K.cryptofilum:48

O84044              	100.00%		B1L6Y9              	100.00%
Bootstrap support for O84044 as seed ortholog is 100%.
Bootstrap support for B1L6Y9 as seed ortholog is 100%.

Group of orthologs #126. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 K.cryptofilum:48

P0CD88              	100.00%		B1L779              	100.00%
Bootstrap support for P0CD88 as seed ortholog is 100%.
Bootstrap support for B1L779 as seed ortholog is 100%.

Group of orthologs #127. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 K.cryptofilum:47

O84469              	100.00%		B1L7C6              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for B1L7C6 as seed ortholog is 100%.

Group of orthologs #128. Best score 46 bits
Score difference with first non-orthologous sequence - C.trachomatis:46 K.cryptofilum:46

O84756              	100.00%		B1L3L3              	100.00%
Bootstrap support for O84756 as seed ortholog is 100%.
Bootstrap support for B1L3L3 as seed ortholog is 100%.

Group of orthologs #129. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 K.cryptofilum:42

O84127              	100.00%		B1L7A3              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for B1L7A3 as seed ortholog is 100%.

Group of orthologs #130. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 K.cryptofilum:42

O84743              	100.00%		B1L7H5              	100.00%
Bootstrap support for O84743 as seed ortholog is 100%.
Bootstrap support for B1L7H5 as seed ortholog is 100%.

Group of orthologs #131. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 K.cryptofilum:42

P0CE07              	100.00%		B1L781              	100.00%
Bootstrap support for P0CE07 as seed ortholog is 100%.
Bootstrap support for B1L781 as seed ortholog is 100%.