###################################
92 groups of orthologs
93 in-paralogs from C.trachomatis
113 in-paralogs from G.intestinalis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 757 bits
Score difference with first non-orthologous sequence - C.trachomatis:757 G.intestinalis:757

O84022              	100.00%		E2RU41              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for E2RU41 as seed ortholog is 100%.

Group of orthologs #2. Best score 632 bits
Score difference with first non-orthologous sequence - C.trachomatis:632 G.intestinalis:632

O84250              	100.00%		E2RTR2              	100.00%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for E2RTR2 as seed ortholog is 100%.

Group of orthologs #3. Best score 629 bits
Score difference with first non-orthologous sequence - C.trachomatis:105 G.intestinalis:629

O84115              	100.00%		A8B6K3              	100.00%
Bootstrap support for O84115 as seed ortholog is 98%.
Bootstrap support for A8B6K3 as seed ortholog is 100%.

Group of orthologs #4. Best score 503 bits
Score difference with first non-orthologous sequence - C.trachomatis:503 G.intestinalis:88

P17821              	100.00%		A8B431              	100.00%
                    	       		A8BCR6              	18.50%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for A8B431 as seed ortholog is 95%.

Group of orthologs #5. Best score 458 bits
Score difference with first non-orthologous sequence - C.trachomatis:458 G.intestinalis:458

O84585              	100.00%		A8BSG2              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for A8BSG2 as seed ortholog is 100%.

Group of orthologs #6. Best score 408 bits
Score difference with first non-orthologous sequence - C.trachomatis:408 G.intestinalis:408

O84304              	100.00%		E2RU00              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for E2RU00 as seed ortholog is 100%.

Group of orthologs #7. Best score 367 bits
Score difference with first non-orthologous sequence - C.trachomatis:367 G.intestinalis:367

O84460              	100.00%		A8B9N2              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for A8B9N2 as seed ortholog is 100%.

Group of orthologs #8. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:364 G.intestinalis:364

O84755              	100.00%		A8BVD3              	100.00%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for A8BVD3 as seed ortholog is 100%.

Group of orthologs #9. Best score 353 bits
Score difference with first non-orthologous sequence - C.trachomatis:353 G.intestinalis:353

O84210              	100.00%		E2RU81              	100.00%
Bootstrap support for O84210 as seed ortholog is 100%.
Bootstrap support for E2RU81 as seed ortholog is 100%.

Group of orthologs #10. Best score 342 bits
Score difference with first non-orthologous sequence - C.trachomatis:342 G.intestinalis:70

P0CE13              	100.00%		A8BSP4              	100.00%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for A8BSP4 as seed ortholog is 96%.

Group of orthologs #11. Best score 321 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 G.intestinalis:259

P0C0Z7              	100.00%		E2RTS2              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for E2RTS2 as seed ortholog is 100%.

Group of orthologs #12. Best score 317 bits
Score difference with first non-orthologous sequence - C.trachomatis:317 G.intestinalis:317

P0CD78              	100.00%		A8BGV6              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for A8BGV6 as seed ortholog is 100%.

Group of orthologs #13. Best score 302 bits
Score difference with first non-orthologous sequence - C.trachomatis:302 G.intestinalis:302

O84591              	100.00%		E2RTS6              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for E2RTS6 as seed ortholog is 100%.

Group of orthologs #14. Best score 297 bits
Score difference with first non-orthologous sequence - C.trachomatis:171 G.intestinalis:297

O84310              	100.00%		A8BYU1              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for A8BYU1 as seed ortholog is 100%.

Group of orthologs #15. Best score 270 bits
Score difference with first non-orthologous sequence - C.trachomatis:270 G.intestinalis:270

O84786              	100.00%		A8BEL5              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for A8BEL5 as seed ortholog is 100%.

Group of orthologs #16. Best score 263 bits
Score difference with first non-orthologous sequence - C.trachomatis:263 G.intestinalis:263

O84066              	100.00%		A8BWM8              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for A8BWM8 as seed ortholog is 100%.

Group of orthologs #17. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:250 G.intestinalis:250

O84101              	100.00%		E2RU27              	100.00%
Bootstrap support for O84101 as seed ortholog is 100%.
Bootstrap support for E2RU27 as seed ortholog is 100%.

Group of orthologs #18. Best score 243 bits
Score difference with first non-orthologous sequence - C.trachomatis:243 G.intestinalis:243

O84094              	100.00%		A8BBM0              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for A8BBM0 as seed ortholog is 100%.

Group of orthologs #19. Best score 242 bits
Score difference with first non-orthologous sequence - C.trachomatis:242 G.intestinalis:242

P0CE09              	100.00%		E2RU19              	100.00%
                    	       		A8B2N4              	13.00%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for E2RU19 as seed ortholog is 100%.

Group of orthologs #20. Best score 226 bits
Score difference with first non-orthologous sequence - C.trachomatis:226 G.intestinalis:226

O84716              	100.00%		A8B1Z3              	100.00%
Bootstrap support for O84716 as seed ortholog is 100%.
Bootstrap support for A8B1Z3 as seed ortholog is 100%.

Group of orthologs #21. Best score 219 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 G.intestinalis:219

O84309              	100.00%		A8BPV3              	100.00%
Bootstrap support for O84309 as seed ortholog is 99%.
Bootstrap support for A8BPV3 as seed ortholog is 100%.

Group of orthologs #22. Best score 217 bits
Score difference with first non-orthologous sequence - C.trachomatis:217 G.intestinalis:217

O84188              	100.00%		A8BWM5              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for A8BWM5 as seed ortholog is 100%.

Group of orthologs #23. Best score 215 bits
Score difference with first non-orthologous sequence - C.trachomatis:215 G.intestinalis:215

P0CE21              	100.00%		A8B498              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for A8B498 as seed ortholog is 100%.

Group of orthologs #24. Best score 204 bits
Score difference with first non-orthologous sequence - C.trachomatis:204 G.intestinalis:204

O84831              	100.00%		A8BNI1              	100.00%
                    	       		A8BTG2              	12.49%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for A8BNI1 as seed ortholog is 100%.

Group of orthologs #25. Best score 204 bits
Score difference with first non-orthologous sequence - C.trachomatis:204 G.intestinalis:146

O84352              	100.00%		A8BE70              	100.00%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for A8BE70 as seed ortholog is 99%.

Group of orthologs #26. Best score 199 bits
Score difference with first non-orthologous sequence - C.trachomatis:199 G.intestinalis:199

O84642              	100.00%		A8B1V5              	100.00%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for A8B1V5 as seed ortholog is 100%.

Group of orthologs #27. Best score 198 bits
Score difference with first non-orthologous sequence - C.trachomatis:198 G.intestinalis:198

O84381              	100.00%		E2RU65              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for E2RU65 as seed ortholog is 100%.

Group of orthologs #28. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 G.intestinalis:191

O84787              	100.00%		E2RTX1              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for E2RTX1 as seed ortholog is 100%.

Group of orthologs #29. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 G.intestinalis:64

O84444              	100.00%		A8BU59              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for A8BU59 as seed ortholog is 90%.

Group of orthologs #30. Best score 182 bits
Score difference with first non-orthologous sequence - C.trachomatis:182 G.intestinalis:182

O84196              	100.00%		A8BW19              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for A8BW19 as seed ortholog is 100%.

Group of orthologs #31. Best score 180 bits
Score difference with first non-orthologous sequence - C.trachomatis:180 G.intestinalis:180

O84316              	100.00%		A8B4F1              	100.00%
                    	       		E2RTQ5              	8.73%
                    	       		A8B7R7              	6.80%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for A8B4F1 as seed ortholog is 100%.

Group of orthologs #32. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 G.intestinalis:74

O84028              	100.00%		A8B6W3              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for A8B6W3 as seed ortholog is 98%.

Group of orthologs #33. Best score 168 bits
Score difference with first non-orthologous sequence - C.trachomatis:168 G.intestinalis:168

O84797              	100.00%		A8B6C1              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for A8B6C1 as seed ortholog is 100%.

Group of orthologs #34. Best score 167 bits
Score difference with first non-orthologous sequence - C.trachomatis:167 G.intestinalis:13

O84345              	100.00%		A8BQU9              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for A8BQU9 as seed ortholog is 81%.

Group of orthologs #35. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 G.intestinalis:73

P0CD71              	100.00%		A8BVR3              	100.00%
                    	       		A8B9S8              	14.71%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for A8BVR3 as seed ortholog is 95%.

Group of orthologs #36. Best score 159 bits
Score difference with first non-orthologous sequence - C.trachomatis:159 G.intestinalis:159

O84297              	100.00%		E2RU18              	100.00%
                    	       		A8BC13              	12.79%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for E2RU18 as seed ortholog is 100%.

Group of orthologs #37. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 G.intestinalis:158

O84332              	100.00%		A8BIF2              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for A8BIF2 as seed ortholog is 100%.

Group of orthologs #38. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 G.intestinalis:56

O84546              	100.00%		A8BPC2              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for A8BPC2 as seed ortholog is 90%.

Group of orthologs #39. Best score 139 bits
Score difference with first non-orthologous sequence - C.trachomatis:139 G.intestinalis:139

O84456              	100.00%		A8B1Z2              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for A8B1Z2 as seed ortholog is 100%.

Group of orthologs #40. Best score 139 bits
Score difference with first non-orthologous sequence - C.trachomatis:139 G.intestinalis:139

O84754              	100.00%		A8BWP7              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for A8BWP7 as seed ortholog is 100%.

Group of orthologs #41. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 G.intestinalis:136

O84123              	100.00%		A8B2G9              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for A8B2G9 as seed ortholog is 100%.

Group of orthologs #42. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 G.intestinalis:135

O84035              	100.00%		A8BY75              	100.00%
Bootstrap support for O84035 as seed ortholog is 92%.
Bootstrap support for A8BY75 as seed ortholog is 100%.

Group of orthologs #43. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:24 G.intestinalis:134

O84260              	100.00%		A8B326              	100.00%
Bootstrap support for O84260 as seed ortholog is 27%.
Alternative seed ortholog is O84693 (24 bits away from this cluster)
Bootstrap support for A8B326 as seed ortholog is 100%.

Group of orthologs #44. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 G.intestinalis:134

O84734              	100.00%		A8B2X0              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for A8B2X0 as seed ortholog is 100%.

Group of orthologs #45. Best score 132 bits
Score difference with first non-orthologous sequence - C.trachomatis:132 G.intestinalis:132

O84608              	100.00%		A8B338              	100.00%
                    	       		A8BYC4              	98.62%
                    	       		A8BU80              	83.39%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for A8B338 as seed ortholog is 100%.

Group of orthologs #46. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 G.intestinalis:128

O84579              	100.00%		A8BWU9              	100.00%
Bootstrap support for O84579 as seed ortholog is 100%.
Bootstrap support for A8BWU9 as seed ortholog is 100%.

Group of orthologs #47. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 G.intestinalis:124

P0CD72              	100.00%		E2RTY6              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for E2RTY6 as seed ortholog is 100%.

Group of orthologs #48. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 G.intestinalis:3

O84732              	100.00%		A8B545              	100.00%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for A8B545 as seed ortholog is 53%.
Alternative seed ortholog is A8BV45 (3 bits away from this cluster)

Group of orthologs #49. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 G.intestinalis:121

O84033              	100.00%		A8BBV5              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for A8BBV5 as seed ortholog is 100%.

Group of orthologs #50. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 G.intestinalis:114

O84508              	100.00%		A8BMG9              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for A8BMG9 as seed ortholog is 100%.

Group of orthologs #51. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 G.intestinalis:103

O84720              	100.00%		E2RTS8              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for E2RTS8 as seed ortholog is 100%.

Group of orthologs #52. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 G.intestinalis:37

O84130              	100.00%		A8BYT6              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for A8BYT6 as seed ortholog is 88%.

Group of orthologs #53. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 G.intestinalis:95

O84266              	100.00%		A8BGF1              	100.00%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for A8BGF1 as seed ortholog is 100%.

Group of orthologs #54. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 G.intestinalis:95

O84530              	100.00%		E2RTN4              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for E2RTN4 as seed ortholog is 100%.

Group of orthologs #55. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 G.intestinalis:49

O84219              	100.00%		A8BC83              	100.00%
Bootstrap support for O84219 as seed ortholog is 96%.
Bootstrap support for A8BC83 as seed ortholog is 91%.

Group of orthologs #56. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 G.intestinalis:89

O84578              	100.00%		A8BK79              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for A8BK79 as seed ortholog is 100%.

Group of orthologs #57. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 G.intestinalis:89

O84358              	100.00%		A8BXW1              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for A8BXW1 as seed ortholog is 100%.

Group of orthologs #58. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 G.intestinalis:87

O84649              	100.00%		A8B577              	100.00%
                    	       		A8B5A0              	5.39%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for A8B577 as seed ortholog is 100%.

Group of orthologs #59. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 G.intestinalis:84

P36431              	100.00%		A8BR89              	100.00%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for A8BR89 as seed ortholog is 100%.

Group of orthologs #60. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 G.intestinalis:83

O84665              	100.00%		A8BWX6              	100.00%
O84108              	5.27%		
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for A8BWX6 as seed ortholog is 100%.

Group of orthologs #61. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 G.intestinalis:36

O84650              	100.00%		A8BQN9              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for A8BQN9 as seed ortholog is 79%.

Group of orthologs #62. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 G.intestinalis:75

O84851              	100.00%		A8BJF5              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for A8BJF5 as seed ortholog is 100%.

Group of orthologs #63. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 G.intestinalis:74

O84110              	100.00%		A8B7G6              	100.00%
Bootstrap support for O84110 as seed ortholog is 100%.
Bootstrap support for A8B7G6 as seed ortholog is 100%.

Group of orthologs #64. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 G.intestinalis:74

O84771              	100.00%		A8BFG1              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for A8BFG1 as seed ortholog is 100%.

Group of orthologs #65. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 G.intestinalis:73

O84843              	100.00%		A8BZP3              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for A8BZP3 as seed ortholog is 100%.

Group of orthologs #66. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 G.intestinalis:72

P0A4C8              	100.00%		A8BMZ1              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for A8BMZ1 as seed ortholog is 100%.

Group of orthologs #67. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 G.intestinalis:72

O84822              	100.00%		E2RTN2              	100.00%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for E2RTN2 as seed ortholog is 100%.

Group of orthologs #68. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 G.intestinalis:68

O84469              	100.00%		A8B4L8              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for A8B4L8 as seed ortholog is 100%.

Group of orthologs #69. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 G.intestinalis:67

P0CD81              	100.00%		A8BS37              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for A8BS37 as seed ortholog is 100%.

Group of orthologs #70. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 G.intestinalis:67

O84599              	100.00%		A8BYL9              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for A8BYL9 as seed ortholog is 100%.

Group of orthologs #71. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 G.intestinalis:66

O84353              	100.00%		A8BRB1              	100.00%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for A8BRB1 as seed ortholog is 100%.

Group of orthologs #72. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:20 G.intestinalis:62

O84338              	100.00%		A8BRC3              	100.00%
                    	       		A8B3E2              	16.23%
                    	       		A8BBR2              	8.11%
Bootstrap support for O84338 as seed ortholog is 68%.
Alternative seed ortholog is O84044 (20 bits away from this cluster)
Bootstrap support for A8BRC3 as seed ortholog is 100%.

Group of orthologs #73. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 G.intestinalis:62

O84032              	100.00%		A8B5I7              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for A8B5I7 as seed ortholog is 100%.

Group of orthologs #74. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 G.intestinalis:61

O84391              	100.00%		A8B787              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for A8B787 as seed ortholog is 100%.

Group of orthologs #75. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 G.intestinalis:59

O84527              	100.00%		A8B8Z2              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for A8B8Z2 as seed ortholog is 100%.

Group of orthologs #76. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 G.intestinalis:57

P38004              	100.00%		A8B6D0              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for A8B6D0 as seed ortholog is 100%.

Group of orthologs #77. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 G.intestinalis:56

O84390              	100.00%		A8BMK0              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for A8BMK0 as seed ortholog is 100%.

Group of orthologs #78. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 G.intestinalis:56

O84340              	100.00%		A8BQ26              	100.00%
Bootstrap support for O84340 as seed ortholog is 100%.
Bootstrap support for A8BQ26 as seed ortholog is 100%.

Group of orthologs #79. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 G.intestinalis:55

O84499              	100.00%		A8BEC3              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for A8BEC3 as seed ortholog is 100%.

Group of orthologs #80. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 G.intestinalis:54

P0CD80              	100.00%		E2RTW3              	100.00%
                    	       		E2RTP7              	54.22%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for E2RTW3 as seed ortholog is 100%.

Group of orthologs #81. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 G.intestinalis:3

O84589              	100.00%		A8BND8              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for A8BND8 as seed ortholog is 52%.
Alternative seed ortholog is A8B8N3 (3 bits away from this cluster)

Group of orthologs #82. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 G.intestinalis:13

O84544              	100.00%		E2RTW4              	100.00%
                    	       		E2RTT4              	59.82%
                    	       		E2RTR8              	8.68%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for E2RTW4 as seed ortholog is 74%.
Alternative seed ortholog is A8B4C4 (13 bits away from this cluster)

Group of orthologs #83. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 G.intestinalis:53

P0CE03              	100.00%		E2RU83              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for E2RU83 as seed ortholog is 100%.

Group of orthologs #84. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 G.intestinalis:50

O84350              	100.00%		A8B4A1              	100.00%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for A8B4A1 as seed ortholog is 100%.

Group of orthologs #85. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 G.intestinalis:49

O84147              	100.00%		A8BYE1              	100.00%
                    	       		A8BYJ7              	8.57%
                    	       		A8BYE4              	7.48%
                    	       		A8BJT1              	6.07%
                    	       		A8BME4              	5.97%
                    	       		A8B353              	5.75%
Bootstrap support for O84147 as seed ortholog is 100%.
Bootstrap support for A8BYE1 as seed ortholog is 100%.

Group of orthologs #86. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 G.intestinalis:45

O84611              	100.00%		A8BKZ6              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for A8BKZ6 as seed ortholog is 100%.

Group of orthologs #87. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 G.intestinalis:45

O84762              	100.00%		A8BTW2              	100.00%
Bootstrap support for O84762 as seed ortholog is 100%.
Bootstrap support for A8BTW2 as seed ortholog is 100%.

Group of orthologs #88. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 G.intestinalis:44

P0CE04              	100.00%		A8BZ58              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for A8BZ58 as seed ortholog is 100%.

Group of orthologs #89. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 G.intestinalis:42

O84127              	100.00%		A8BU75              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for A8BU75 as seed ortholog is 100%.

Group of orthologs #90. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 G.intestinalis:42

O84191              	100.00%		A8BU63              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for A8BU63 as seed ortholog is 100%.

Group of orthologs #91. Best score 41 bits
Score difference with first non-orthologous sequence - C.trachomatis:41 G.intestinalis:41

P66370              	100.00%		A8BS96              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for A8BS96 as seed ortholog is 100%.

Group of orthologs #92. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 G.intestinalis:40

O84470              	100.00%		A8B258              	100.00%
                    	       		A8BPW1              	25.84%
Bootstrap support for O84470 as seed ortholog is 100%.
Bootstrap support for A8B258 as seed ortholog is 100%.