###################################
92 groups of orthologs
97 in-paralogs from C.trachomatis
101 in-paralogs from E.aedis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 581 bits
Score difference with first non-orthologous sequence - C.trachomatis:581 E.aedis:505

O84022              	100.00%		J8ZYR5              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for J8ZYR5 as seed ortholog is 100%.

Group of orthologs #2. Best score 502 bits
Score difference with first non-orthologous sequence - C.trachomatis:502 E.aedis:502

O84115              	100.00%		J9DQJ9              	100.00%
O84288              	5.90%		
Bootstrap support for O84115 as seed ortholog is 100%.
Bootstrap support for J9DQJ9 as seed ortholog is 100%.

Group of orthologs #3. Best score 462 bits
Score difference with first non-orthologous sequence - C.trachomatis:462 E.aedis:462

O84585              	100.00%		J9DLA5              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for J9DLA5 as seed ortholog is 100%.

Group of orthologs #4. Best score 355 bits
Score difference with first non-orthologous sequence - C.trachomatis:230 E.aedis:355

O84310              	100.00%		J9DAL0              	100.00%
Bootstrap support for O84310 as seed ortholog is 99%.
Bootstrap support for J9DAL0 as seed ortholog is 100%.

Group of orthologs #5. Best score 346 bits
Score difference with first non-orthologous sequence - C.trachomatis:346 E.aedis:346

O84754              	100.00%		J9DQX9              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for J9DQX9 as seed ortholog is 100%.

Group of orthologs #6. Best score 336 bits
Score difference with first non-orthologous sequence - C.trachomatis:336 E.aedis:336

O84834              	100.00%		J9D0F4              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for J9D0F4 as seed ortholog is 100%.

Group of orthologs #7. Best score 331 bits
Score difference with first non-orthologous sequence - C.trachomatis:331 E.aedis:331

P0CE13              	100.00%		J9D3G4              	100.00%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for J9D3G4 as seed ortholog is 100%.

Group of orthologs #8. Best score 323 bits
Score difference with first non-orthologous sequence - C.trachomatis:323 E.aedis:323

O84066              	100.00%		J9DT06              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for J9DT06 as seed ortholog is 100%.

Group of orthologs #9. Best score 313 bits
Score difference with first non-orthologous sequence - C.trachomatis:313 E.aedis:313

O84823              	100.00%		J9D3U0              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for J9D3U0 as seed ortholog is 100%.

Group of orthologs #10. Best score 305 bits
Score difference with first non-orthologous sequence - C.trachomatis:305 E.aedis:305

O84755              	100.00%		J9D1Z2              	100.00%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for J9D1Z2 as seed ortholog is 100%.

Group of orthologs #11. Best score 285 bits
Score difference with first non-orthologous sequence - C.trachomatis:285 E.aedis:285

O84786              	100.00%		J9D9S2              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for J9D9S2 as seed ortholog is 100%.

Group of orthologs #12. Best score 284 bits
Score difference with first non-orthologous sequence - C.trachomatis:284 E.aedis:284

O84035              	100.00%		J9DP79              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for J9DP79 as seed ortholog is 100%.

Group of orthologs #13. Best score 266 bits
Score difference with first non-orthologous sequence - C.trachomatis:266 E.aedis:266

O84316              	100.00%		J8ZVP8              	100.00%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for J8ZVP8 as seed ortholog is 100%.

Group of orthologs #14. Best score 265 bits
Score difference with first non-orthologous sequence - C.trachomatis:265 E.aedis:265

P0CD72              	100.00%		J9DQX0              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for J9DQX0 as seed ortholog is 100%.

Group of orthologs #15. Best score 264 bits
Score difference with first non-orthologous sequence - C.trachomatis:264 E.aedis:57

P17821              	100.00%		J9DPF8              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for J9DPF8 as seed ortholog is 85%.

Group of orthologs #16. Best score 259 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 E.aedis:259

O84309              	100.00%		J9DLC8              	100.00%
Bootstrap support for O84309 as seed ortholog is 99%.
Bootstrap support for J9DLC8 as seed ortholog is 100%.

Group of orthologs #17. Best score 252 bits
Score difference with first non-orthologous sequence - C.trachomatis:252 E.aedis:252

O84591              	100.00%		J9D056              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for J9D056 as seed ortholog is 100%.

Group of orthologs #18. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:248 E.aedis:248

O84049              	100.00%		J9D8M9              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for J9D8M9 as seed ortholog is 100%.

Group of orthologs #19. Best score 231 bits
Score difference with first non-orthologous sequence - C.trachomatis:231 E.aedis:231

O84094              	100.00%		J9D7U5              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for J9D7U5 as seed ortholog is 100%.

Group of orthologs #20. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 E.aedis:35

O84797              	100.00%		J9DKN9              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for J9DKN9 as seed ortholog is 91%.

Group of orthologs #21. Best score 208 bits
Score difference with first non-orthologous sequence - C.trachomatis:208 E.aedis:208

O84304              	100.00%		J9DA33              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for J9DA33 as seed ortholog is 100%.

Group of orthologs #22. Best score 197 bits
Score difference with first non-orthologous sequence - C.trachomatis:197 E.aedis:197

P0CD78              	100.00%		J8ZZD1              	100.00%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for J8ZZD1 as seed ortholog is 100%.

Group of orthologs #23. Best score 195 bits
Score difference with first non-orthologous sequence - C.trachomatis:195 E.aedis:195

O84248              	100.00%		J9DBQ0              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for J9DBQ0 as seed ortholog is 100%.

Group of orthologs #24. Best score 190 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 E.aedis:190

O84444              	100.00%		J9D2U1              	100.00%
Bootstrap support for O84444 as seed ortholog is 95%.
Bootstrap support for J9D2U1 as seed ortholog is 100%.

Group of orthologs #25. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 E.aedis:177

O84196              	100.00%		J9D2Z5              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for J9D2Z5 as seed ortholog is 100%.

Group of orthologs #26. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 E.aedis:177

O84028              	100.00%		J9DLW6              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for J9DLW6 as seed ortholog is 100%.

Group of orthologs #27. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 E.aedis:177

P0CE09              	100.00%		J9DIF3              	100.00%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for J9DIF3 as seed ortholog is 100%.

Group of orthologs #28. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 E.aedis:93

O84352              	100.00%		J9DPB8              	100.00%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for J9DPB8 as seed ortholog is 96%.

Group of orthologs #29. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 E.aedis:175

O84630              	100.00%		J8ZQZ5              	100.00%
Bootstrap support for O84630 as seed ortholog is 100%.
Bootstrap support for J8ZQZ5 as seed ortholog is 100%.

Group of orthologs #30. Best score 163 bits
Score difference with first non-orthologous sequence - C.trachomatis:163 E.aedis:163

O84068              	100.00%		J9D6L3              	100.00%
O84502              	23.02%		J9DMP0              	15.24%
Bootstrap support for O84068 as seed ortholog is 100%.
Bootstrap support for J9D6L3 as seed ortholog is 100%.

Group of orthologs #31. Best score 142 bits
Score difference with first non-orthologous sequence - C.trachomatis:142 E.aedis:142

O84460              	100.00%		J9DLF1              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for J9DLF1 as seed ortholog is 100%.

Group of orthologs #32. Best score 138 bits
Score difference with first non-orthologous sequence - C.trachomatis:138 E.aedis:138

O84296              	100.00%		J8ZQ09              	100.00%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for J8ZQ09 as seed ortholog is 100%.

Group of orthologs #33. Best score 135 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 E.aedis:135

O84734              	100.00%		J9DR88              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for J9DR88 as seed ortholog is 100%.

Group of orthologs #34. Best score 130 bits
Score difference with first non-orthologous sequence - C.trachomatis:130 E.aedis:130

O84247              	100.00%		J9D3R6              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for J9D3R6 as seed ortholog is 100%.

Group of orthologs #35. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 E.aedis:129

O84561              	100.00%		J8ZZT0              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for J8ZZT0 as seed ortholog is 100%.

Group of orthologs #36. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 E.aedis:128

O84835              	100.00%		J9D1W7              	100.00%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for J9D1W7 as seed ortholog is 100%.

Group of orthologs #37. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 E.aedis:128

P0CE21              	100.00%		J9D9J6              	100.00%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for J9D9J6 as seed ortholog is 100%.

Group of orthologs #38. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 E.aedis:127

O84266              	100.00%		J9D9X5              	100.00%
                    	       		J9D935              	30.98%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for J9D9X5 as seed ortholog is 100%.

Group of orthologs #39. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 E.aedis:127

O84332              	100.00%		J9DP73              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for J9DP73 as seed ortholog is 100%.

Group of orthologs #40. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 E.aedis:124

O84579              	100.00%		J8ZTG5              	100.00%
Bootstrap support for O84579 as seed ortholog is 100%.
Bootstrap support for J8ZTG5 as seed ortholog is 100%.

Group of orthologs #41. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:32 E.aedis:119

O84260              	100.00%		J9D3X9              	100.00%
Bootstrap support for O84260 as seed ortholog is 84%.
Bootstrap support for J9D3X9 as seed ortholog is 100%.

Group of orthologs #42. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 E.aedis:1

O84732              	100.00%		J9D3I7              	100.00%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for J9D3I7 as seed ortholog is 48%.
Alternative seed ortholog is J9D4Z0 (1 bits away from this cluster)

Group of orthologs #43. Best score 115 bits
Score difference with first non-orthologous sequence - C.trachomatis:115 E.aedis:26

O84345              	100.00%		J8ZQF5              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for J8ZQF5 as seed ortholog is 72%.
Alternative seed ortholog is J9DJL6 (26 bits away from this cluster)

Group of orthologs #44. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 E.aedis:112

O84771              	100.00%		J9DK58              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for J9DK58 as seed ortholog is 100%.

Group of orthologs #45. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 E.aedis:111

O84130              	100.00%		J9DQB9              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for J9DQB9 as seed ortholog is 100%.

Group of orthologs #46. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 E.aedis:111

O84608              	100.00%		J9DVN3              	100.00%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for J9DVN3 as seed ortholog is 100%.

Group of orthologs #47. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 E.aedis:110

O84613              	100.00%		J8ZYX1              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for J8ZYX1 as seed ortholog is 100%.

Group of orthologs #48. Best score 109 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 E.aedis:109

O84200              	100.00%		J9D329              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for J9D329 as seed ortholog is 100%.

Group of orthologs #49. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 E.aedis:106

O84508              	100.00%		J9D7Q2              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for J9D7Q2 as seed ortholog is 100%.

Group of orthologs #50. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 E.aedis:103

O84297              	100.00%		J9D2P3              	100.00%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for J9D2P3 as seed ortholog is 100%.

Group of orthologs #51. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 E.aedis:103

O84530              	100.00%		J9DBV4              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for J9DBV4 as seed ortholog is 100%.

Group of orthologs #52. Best score 101 bits
Score difference with first non-orthologous sequence - C.trachomatis:101 E.aedis:14

P0CD71              	100.00%		J9DIS5              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for J9DIS5 as seed ortholog is 62%.
Alternative seed ortholog is J9D8H5 (14 bits away from this cluster)

Group of orthologs #53. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 E.aedis:99

O84458              	100.00%		J9DPM6              	100.00%
Bootstrap support for O84458 as seed ortholog is 100%.
Bootstrap support for J9DPM6 as seed ortholog is 100%.

Group of orthologs #54. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 E.aedis:97

O84358              	100.00%		J9DAS8              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for J9DAS8 as seed ortholog is 100%.

Group of orthologs #55. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 E.aedis:97

O84546              	100.00%		J9DAE5              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for J9DAE5 as seed ortholog is 100%.

Group of orthologs #56. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 E.aedis:95

O84649              	100.00%		J8ZV13              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for J8ZV13 as seed ortholog is 100%.

Group of orthologs #57. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 E.aedis:95

O84720              	100.00%		J9DAC8              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for J9DAC8 as seed ortholog is 100%.

Group of orthologs #58. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 E.aedis:91

O84338              	100.00%		J9D580              	100.00%
                    	       		J9DUH1              	13.74%
                    	       		J9DKI8              	6.59%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for J9D580 as seed ortholog is 100%.

Group of orthologs #59. Best score 88 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 E.aedis:88

O84456              	100.00%		J9D1R0              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for J9D1R0 as seed ortholog is 100%.

Group of orthologs #60. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 E.aedis:86

O84665              	100.00%		J9D0Z7              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for J9D0Z7 as seed ortholog is 100%.

Group of orthologs #61. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 E.aedis:82

P0C0Z7              	100.00%		J9DUY1              	100.00%
O84609              	13.40%		J9DGL1              	9.68%
O84760              	5.13%		J9D867              	7.62%
                    	       		J9DV88              	6.28%
                    	       		J8ZW39              	5.77%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for J9DUY1 as seed ortholog is 100%.

Group of orthologs #62. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 E.aedis:79

O84843              	100.00%		J8ZYS9              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for J8ZYS9 as seed ortholog is 100%.

Group of orthologs #63. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 E.aedis:77

P38004              	100.00%		J9DQ50              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for J9DQ50 as seed ortholog is 100%.

Group of orthologs #64. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 E.aedis:74

P0CD81              	100.00%		J9DPU5              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for J9DPU5 as seed ortholog is 100%.

Group of orthologs #65. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 E.aedis:72

O84415              	100.00%		J9D9D1              	100.00%
O84710              	10.87%		
Bootstrap support for O84415 as seed ortholog is 100%.
Bootstrap support for J9D9D1 as seed ortholog is 100%.

Group of orthologs #66. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 E.aedis:70

O84033              	100.00%		J8ZZA5              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for J8ZZA5 as seed ortholog is 100%.

Group of orthologs #67. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 E.aedis:69

O84650              	100.00%		J9DHS4              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for J9DHS4 as seed ortholog is 100%.

Group of orthologs #68. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 E.aedis:68

O84215              	100.00%		J8ZSW7              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for J8ZSW7 as seed ortholog is 100%.

Group of orthologs #69. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 E.aedis:68

O84822              	100.00%		J9DKL5              	100.00%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for J9DKL5 as seed ortholog is 100%.

Group of orthologs #70. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 E.aedis:67

O84188              	100.00%		J9D4M7              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for J9D4M7 as seed ortholog is 100%.

Group of orthologs #71. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 E.aedis:66

P0A4C8              	100.00%		J9D897              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for J9D897 as seed ortholog is 100%.

Group of orthologs #72. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 E.aedis:65

O84123              	100.00%		J9DKZ1              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for J9DKZ1 as seed ortholog is 100%.

Group of orthologs #73. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 E.aedis:65

O84384              	100.00%		J9DP35              	100.00%
Bootstrap support for O84384 as seed ortholog is 100%.
Bootstrap support for J9DP35 as seed ortholog is 100%.

Group of orthologs #74. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 E.aedis:12

O84294              	100.00%		J9D7F7              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for J9D7F7 as seed ortholog is 68%.
Alternative seed ortholog is J9D6Z7 (12 bits away from this cluster)

Group of orthologs #75. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 E.aedis:57

O84777              	100.00%		J9DNM1              	100.00%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for J9DNM1 as seed ortholog is 100%.

Group of orthologs #76. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 E.aedis:57

P0CE03              	100.00%		J9DP29              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for J9DP29 as seed ortholog is 100%.

Group of orthologs #77. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 E.aedis:56

O84391              	100.00%		J8ZV06              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for J8ZV06 as seed ortholog is 100%.

Group of orthologs #78. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 E.aedis:56

O84527              	100.00%		J9D2S1              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for J9D2S1 as seed ortholog is 100%.

Group of orthologs #79. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 E.aedis:55

O84499              	100.00%		J9DKE6              	100.00%
                    	       		J8ZV25              	44.57%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for J9DKE6 as seed ortholog is 100%.

Group of orthologs #80. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 E.aedis:54

O84547              	100.00%		J9DJ52              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for J9DJ52 as seed ortholog is 100%.

Group of orthologs #81. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 E.aedis:54

O84611              	100.00%		J9DP62              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for J9DP62 as seed ortholog is 100%.

Group of orthologs #82. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 E.aedis:10

O84390              	100.00%		J8ZZY7              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for J8ZZY7 as seed ortholog is 62%.
Alternative seed ortholog is J8ZZ04 (10 bits away from this cluster)

Group of orthologs #83. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 E.aedis:53

O84557              	100.00%		J9D4M8              	100.00%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for J9D4M8 as seed ortholog is 100%.

Group of orthologs #84. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 E.aedis:50

P66370              	100.00%		J8ZT87              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for J8ZT87 as seed ortholog is 100%.

Group of orthologs #85. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 E.aedis:49

P0CE06              	100.00%		J9DHC3              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for J9DHC3 as seed ortholog is 100%.

Group of orthologs #86. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 E.aedis:48

O84589              	100.00%		J9D649              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for J9D649 as seed ortholog is 100%.

Group of orthologs #87. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 E.aedis:48

P66480              	100.00%		J9D8U1              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for J9D8U1 as seed ortholog is 100%.

Group of orthologs #88. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 E.aedis:44

O84730              	100.00%		J9DC01              	100.00%
Bootstrap support for O84730 as seed ortholog is 100%.
Bootstrap support for J9DC01 as seed ortholog is 100%.

Group of orthologs #89. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 E.aedis:44

O84032              	100.00%		J9DL62              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for J9DL62 as seed ortholog is 100%.

Group of orthologs #90. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 E.aedis:43

P0CE04              	100.00%		J8ZRA4              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for J8ZRA4 as seed ortholog is 100%.

Group of orthologs #91. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 E.aedis:40

O84469              	100.00%		J9D007              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for J9D007 as seed ortholog is 100%.

Group of orthologs #92. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 E.aedis:40

O84191              	100.00%		J9DGX4              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for J9DGX4 as seed ortholog is 100%.