###################################
940 groups of orthologs
1162 in-paralogs from C.reinhardtii
995 in-paralogs from T.annulata
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3454 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3454 T.annulata:3454

A8HPL0              	100.00%		Q4UCE6              	100.00%
Bootstrap support for A8HPL0 as seed ortholog is 100%.
Bootstrap support for Q4UCE6 as seed ortholog is 100%.

Group of orthologs #2. Best score 1499 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1128 T.annulata:766

A8IRZ2              	100.00%		Q4UCP5              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for Q4UCP5 as seed ortholog is 100%.

Group of orthologs #3. Best score 1249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1249 T.annulata:507

A8JI25              	100.00%		Q4UB40              	100.00%
Bootstrap support for A8JI25 as seed ortholog is 100%.
Bootstrap support for Q4UB40 as seed ortholog is 100%.

Group of orthologs #4. Best score 1174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1174 T.annulata:1174

A8I9Z6              	100.00%		Q4U9X1              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 100%.
Bootstrap support for Q4U9X1 as seed ortholog is 100%.

Group of orthologs #5. Best score 1062 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1062 T.annulata:1062

A8J9F3              	100.00%		Q4UE11              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for Q4UE11 as seed ortholog is 100%.

Group of orthologs #6. Best score 1062 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1062 T.annulata:722

A8JHX9              	100.00%		Q4UH76              	100.00%
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for Q4UH76 as seed ortholog is 100%.

Group of orthologs #7. Best score 1060 bits
Score difference with first non-orthologous sequence - C.reinhardtii:661 T.annulata:390

A8HW56              	100.00%		Q4UID0              	100.00%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for Q4UID0 as seed ortholog is 100%.

Group of orthologs #8. Best score 995 bits
Score difference with first non-orthologous sequence - C.reinhardtii:995 T.annulata:995

A8JDR3              	100.00%		Q4UBQ2              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for Q4UBQ2 as seed ortholog is 100%.

Group of orthologs #9. Best score 994 bits
Score difference with first non-orthologous sequence - C.reinhardtii:994 T.annulata:994

A8JD08              	100.00%		Q4UEG9              	100.00%
Bootstrap support for A8JD08 as seed ortholog is 100%.
Bootstrap support for Q4UEG9 as seed ortholog is 100%.

Group of orthologs #10. Best score 977 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 T.annulata:507

A8J1U1              	100.00%		Q4UDU8              	100.00%
Bootstrap support for A8J1U1 as seed ortholog is 100%.
Bootstrap support for Q4UDU8 as seed ortholog is 100%.

Group of orthologs #11. Best score 935 bits
Score difference with first non-orthologous sequence - C.reinhardtii:935 T.annulata:935

A8IY03              	100.00%		Q4UB41              	100.00%
Bootstrap support for A8IY03 as seed ortholog is 100%.
Bootstrap support for Q4UB41 as seed ortholog is 100%.

Group of orthologs #12. Best score 873 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 T.annulata:210

A8JEU4              	100.00%		P16019              	100.00%
Bootstrap support for A8JEU4 as seed ortholog is 98%.
Bootstrap support for P16019 as seed ortholog is 100%.

Group of orthologs #13. Best score 851 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 T.annulata:306

A8I972              	100.00%		Q4UAC3              	100.00%
Bootstrap support for A8I972 as seed ortholog is 99%.
Bootstrap support for Q4UAC3 as seed ortholog is 100%.

Group of orthologs #14. Best score 821 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 T.annulata:314

A8IZU0              	100.00%		Q4UFA6              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 99%.
Bootstrap support for Q4UFA6 as seed ortholog is 100%.

Group of orthologs #15. Best score 812 bits
Score difference with first non-orthologous sequence - C.reinhardtii:434 T.annulata:812

A8I542              	100.00%		Q4UEM8              	100.00%
Bootstrap support for A8I542 as seed ortholog is 100%.
Bootstrap support for Q4UEM8 as seed ortholog is 100%.

Group of orthologs #16. Best score 804 bits
Score difference with first non-orthologous sequence - C.reinhardtii:552 T.annulata:457

A8IXZ0              	100.00%		Q4UEG7              	100.00%
Bootstrap support for A8IXZ0 as seed ortholog is 100%.
Bootstrap support for Q4UEG7 as seed ortholog is 100%.

Group of orthologs #17. Best score 761 bits
Score difference with first non-orthologous sequence - C.reinhardtii:517 T.annulata:761

A8HPJ0              	100.00%		Q4UI92              	100.00%
Bootstrap support for A8HPJ0 as seed ortholog is 100%.
Bootstrap support for Q4UI92 as seed ortholog is 100%.

Group of orthologs #18. Best score 761 bits
Score difference with first non-orthologous sequence - C.reinhardtii:552 T.annulata:116

Q540H1              	100.00%		Q4UAJ5              	100.00%
Bootstrap support for Q540H1 as seed ortholog is 100%.
Bootstrap support for Q4UAJ5 as seed ortholog is 99%.

Group of orthologs #19. Best score 703 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 T.annulata:284

A8IK98              	100.00%		Q4UIC8              	100.00%
Bootstrap support for A8IK98 as seed ortholog is 100%.
Bootstrap support for Q4UIC8 as seed ortholog is 99%.

Group of orthologs #20. Best score 689 bits
Score difference with first non-orthologous sequence - C.reinhardtii:538 T.annulata:689

A8I164              	100.00%		Q4U8X7              	100.00%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for Q4U8X7 as seed ortholog is 100%.

Group of orthologs #21. Best score 680 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:680

A8IQU3              	100.00%		Q4UGW6              	100.00%
Bootstrap support for A8IQU3 as seed ortholog is 98%.
Bootstrap support for Q4UGW6 as seed ortholog is 100%.

Group of orthologs #22. Best score 671 bits
Score difference with first non-orthologous sequence - C.reinhardtii:671 T.annulata:671

A8JC00              	100.00%		Q4U923              	100.00%
Bootstrap support for A8JC00 as seed ortholog is 100%.
Bootstrap support for Q4U923 as seed ortholog is 100%.

Group of orthologs #23. Best score 664 bits
Score difference with first non-orthologous sequence - C.reinhardtii:664 T.annulata:362

A8JCA8              	100.00%		Q4UAD2              	100.00%
Bootstrap support for A8JCA8 as seed ortholog is 100%.
Bootstrap support for Q4UAD2 as seed ortholog is 100%.

Group of orthologs #24. Best score 664 bits
Score difference with first non-orthologous sequence - C.reinhardtii:664 T.annulata:664

A8JEV6              	100.00%		Q4UAB5              	100.00%
Bootstrap support for A8JEV6 as seed ortholog is 100%.
Bootstrap support for Q4UAB5 as seed ortholog is 100%.

Group of orthologs #25. Best score 663 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 T.annulata:200

A8JGT9              	100.00%		Q4UEM0              	100.00%
Bootstrap support for A8JGT9 as seed ortholog is 95%.
Bootstrap support for Q4UEM0 as seed ortholog is 99%.

Group of orthologs #26. Best score 652 bits
Score difference with first non-orthologous sequence - C.reinhardtii:652 T.annulata:652

A8IAC7              	100.00%		Q4UDN0              	100.00%
Bootstrap support for A8IAC7 as seed ortholog is 100%.
Bootstrap support for Q4UDN0 as seed ortholog is 100%.

Group of orthologs #27. Best score 649 bits
Score difference with first non-orthologous sequence - C.reinhardtii:544 T.annulata:649

A8IA45              	100.00%		Q4U9M4              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for Q4U9M4 as seed ortholog is 100%.

Group of orthologs #28. Best score 648 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 T.annulata:325

A8JAV1              	100.00%		Q4UFN5              	100.00%
Bootstrap support for A8JAV1 as seed ortholog is 100%.
Bootstrap support for Q4UFN5 as seed ortholog is 100%.

Group of orthologs #29. Best score 645 bits
Score difference with first non-orthologous sequence - C.reinhardtii:492 T.annulata:335

A8IV67              	100.00%		Q4UHP7              	100.00%
Bootstrap support for A8IV67 as seed ortholog is 100%.
Bootstrap support for Q4UHP7 as seed ortholog is 100%.

Group of orthologs #30. Best score 645 bits
Score difference with first non-orthologous sequence - C.reinhardtii:645 T.annulata:645

A8JC99              	100.00%		Q4UGX3              	100.00%
Bootstrap support for A8JC99 as seed ortholog is 100%.
Bootstrap support for Q4UGX3 as seed ortholog is 100%.

Group of orthologs #31. Best score 644 bits
Score difference with first non-orthologous sequence - C.reinhardtii:644 T.annulata:644

A8I232              	100.00%		Q4UGR9              	100.00%
Bootstrap support for A8I232 as seed ortholog is 100%.
Bootstrap support for Q4UGR9 as seed ortholog is 100%.

Group of orthologs #32. Best score 635 bits
Score difference with first non-orthologous sequence - C.reinhardtii:552 T.annulata:173

A8IA39              	100.00%		Q4UGL7              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for Q4UGL7 as seed ortholog is 99%.

Group of orthologs #33. Best score 633 bits
Score difference with first non-orthologous sequence - C.reinhardtii:633 T.annulata:633

A8IUL6              	100.00%		Q4UHY6              	100.00%
Bootstrap support for A8IUL6 as seed ortholog is 100%.
Bootstrap support for Q4UHY6 as seed ortholog is 100%.

Group of orthologs #34. Best score 629 bits
Score difference with first non-orthologous sequence - C.reinhardtii:425 T.annulata:241

A8IHB3              	100.00%		Q4UI30              	100.00%
Bootstrap support for A8IHB3 as seed ortholog is 100%.
Bootstrap support for Q4UI30 as seed ortholog is 100%.

Group of orthologs #35. Best score 628 bits
Score difference with first non-orthologous sequence - C.reinhardtii:559 T.annulata:628

A8J7J2              	100.00%		Q4UDZ0              	100.00%
Bootstrap support for A8J7J2 as seed ortholog is 100%.
Bootstrap support for Q4UDZ0 as seed ortholog is 100%.

Group of orthologs #36. Best score 624 bits
Score difference with first non-orthologous sequence - C.reinhardtii:528 T.annulata:624

A8JCV8              	100.00%		Q4UA86              	100.00%
A8JCQ8              	34.44%		
A8JFR9              	18.54%		
Bootstrap support for A8JCV8 as seed ortholog is 100%.
Bootstrap support for Q4UA86 as seed ortholog is 100%.

Group of orthologs #37. Best score 624 bits
Score difference with first non-orthologous sequence - C.reinhardtii:624 T.annulata:531

A8HZ23              	100.00%		Q4UD01              	100.00%
Bootstrap support for A8HZ23 as seed ortholog is 100%.
Bootstrap support for Q4UD01 as seed ortholog is 100%.

Group of orthologs #38. Best score 619 bits
Score difference with first non-orthologous sequence - C.reinhardtii:546 T.annulata:527

A8HQ74              	100.00%		Q4UCM0              	100.00%
Bootstrap support for A8HQ74 as seed ortholog is 100%.
Bootstrap support for Q4UCM0 as seed ortholog is 100%.

Group of orthologs #39. Best score 616 bits
Score difference with first non-orthologous sequence - C.reinhardtii:616 T.annulata:191

A8J568              	100.00%		Q4UI00              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for Q4UI00 as seed ortholog is 99%.

Group of orthologs #40. Best score 615 bits
Score difference with first non-orthologous sequence - C.reinhardtii:410 T.annulata:615

A8HP06              	100.00%		Q4UCK6              	100.00%
Bootstrap support for A8HP06 as seed ortholog is 100%.
Bootstrap support for Q4UCK6 as seed ortholog is 100%.

Group of orthologs #41. Best score 615 bits
Score difference with first non-orthologous sequence - C.reinhardtii:615 T.annulata:615

A8IEL6              	100.00%		Q4UAV1              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for Q4UAV1 as seed ortholog is 100%.

Group of orthologs #42. Best score 613 bits
Score difference with first non-orthologous sequence - C.reinhardtii:613 T.annulata:613

A8HYA9              	100.00%		Q4UCY6              	100.00%
Bootstrap support for A8HYA9 as seed ortholog is 100%.
Bootstrap support for Q4UCY6 as seed ortholog is 100%.

Group of orthologs #43. Best score 613 bits
Score difference with first non-orthologous sequence - C.reinhardtii:542 T.annulata:534

A8JE04              	100.00%		Q4UGI2              	100.00%
Bootstrap support for A8JE04 as seed ortholog is 100%.
Bootstrap support for Q4UGI2 as seed ortholog is 100%.

Group of orthologs #44. Best score 604 bits
Score difference with first non-orthologous sequence - C.reinhardtii:538 T.annulata:604

A8J524              	100.00%		Q4UB55              	100.00%
Bootstrap support for A8J524 as seed ortholog is 100%.
Bootstrap support for Q4UB55 as seed ortholog is 100%.

Group of orthologs #45. Best score 601 bits
Score difference with first non-orthologous sequence - C.reinhardtii:601 T.annulata:601

A8IFY3              	100.00%		Q4UBI9              	100.00%
Bootstrap support for A8IFY3 as seed ortholog is 100%.
Bootstrap support for Q4UBI9 as seed ortholog is 100%.

Group of orthologs #46. Best score 598 bits
Score difference with first non-orthologous sequence - C.reinhardtii:598 T.annulata:598

Q8VZZ5              	100.00%		Q4UFA3              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for Q4UFA3 as seed ortholog is 100%.

Group of orthologs #47. Best score 587 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 T.annulata:281

A8IIP7              	100.00%		Q4UGM6              	100.00%
Bootstrap support for A8IIP7 as seed ortholog is 100%.
Bootstrap support for Q4UGM6 as seed ortholog is 100%.

Group of orthologs #48. Best score 586 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 T.annulata:420

A8IT25              	100.00%		Q4UEX3              	100.00%
Bootstrap support for A8IT25 as seed ortholog is 100%.
Bootstrap support for Q4UEX3 as seed ortholog is 100%.

Group of orthologs #49. Best score 579 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 T.annulata:579

A8I175              	100.00%		Q4UDM4              	100.00%
Bootstrap support for A8I175 as seed ortholog is 100%.
Bootstrap support for Q4UDM4 as seed ortholog is 100%.

Group of orthologs #50. Best score 576 bits
Score difference with first non-orthologous sequence - C.reinhardtii:576 T.annulata:576

A8HRR9              	100.00%		Q4UDL6              	100.00%
Bootstrap support for A8HRR9 as seed ortholog is 100%.
Bootstrap support for Q4UDL6 as seed ortholog is 100%.

Group of orthologs #51. Best score 576 bits
Score difference with first non-orthologous sequence - C.reinhardtii:498 T.annulata:576

A8IIP9              	100.00%		Q4UCP7              	100.00%
Bootstrap support for A8IIP9 as seed ortholog is 100%.
Bootstrap support for Q4UCP7 as seed ortholog is 100%.

Group of orthologs #52. Best score 576 bits
Score difference with first non-orthologous sequence - C.reinhardtii:576 T.annulata:576

A8ILN4              	100.00%		Q4UF23              	100.00%
Bootstrap support for A8ILN4 as seed ortholog is 100%.
Bootstrap support for Q4UF23 as seed ortholog is 100%.

Group of orthologs #53. Best score 574 bits
Score difference with first non-orthologous sequence - C.reinhardtii:574 T.annulata:574

A8IWF9              	100.00%		Q4UDV5              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for Q4UDV5 as seed ortholog is 100%.

Group of orthologs #54. Best score 571 bits
Score difference with first non-orthologous sequence - C.reinhardtii:571 T.annulata:571

A8JH39              	100.00%		Q4UF58              	100.00%
Bootstrap support for A8JH39 as seed ortholog is 100%.
Bootstrap support for Q4UF58 as seed ortholog is 100%.

Group of orthologs #55. Best score 569 bits
Score difference with first non-orthologous sequence - C.reinhardtii:569 T.annulata:569

A8IVG0              	100.00%		Q4UCU9              	100.00%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for Q4UCU9 as seed ortholog is 100%.

Group of orthologs #56. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:567 T.annulata:567

A8IDJ7              	100.00%		Q4UI59              	100.00%
Bootstrap support for A8IDJ7 as seed ortholog is 100%.
Bootstrap support for Q4UI59 as seed ortholog is 100%.

Group of orthologs #57. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:567 T.annulata:567

A8J2W2              	100.00%		Q4UDM6              	100.00%
Bootstrap support for A8J2W2 as seed ortholog is 100%.
Bootstrap support for Q4UDM6 as seed ortholog is 100%.

Group of orthologs #58. Best score 566 bits
Score difference with first non-orthologous sequence - C.reinhardtii:410 T.annulata:566

P26526              	100.00%		Q4UBG5              	100.00%
Bootstrap support for P26526 as seed ortholog is 100%.
Bootstrap support for Q4UBG5 as seed ortholog is 100%.

Group of orthologs #59. Best score 564 bits
Score difference with first non-orthologous sequence - C.reinhardtii:564 T.annulata:396

A8J1C1              	100.00%		Q4UF46              	100.00%
Bootstrap support for A8J1C1 as seed ortholog is 100%.
Bootstrap support for Q4UF46 as seed ortholog is 100%.

Group of orthologs #60. Best score 564 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 T.annulata:564

A8J0R6              	100.00%		Q4UIJ4              	100.00%
Bootstrap support for A8J0R6 as seed ortholog is 99%.
Bootstrap support for Q4UIJ4 as seed ortholog is 100%.

Group of orthologs #61. Best score 559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 T.annulata:332

A8IWA5              	100.00%		Q4UA43              	100.00%
Bootstrap support for A8IWA5 as seed ortholog is 100%.
Bootstrap support for Q4UA43 as seed ortholog is 100%.

Group of orthologs #62. Best score 554 bits
Score difference with first non-orthologous sequence - C.reinhardtii:554 T.annulata:554

A8II71              	100.00%		Q4UBZ8              	100.00%
Bootstrap support for A8II71 as seed ortholog is 100%.
Bootstrap support for Q4UBZ8 as seed ortholog is 100%.

Group of orthologs #63. Best score 554 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 T.annulata:350

A8JDQ4              	100.00%		Q4UDH7              	100.00%
Bootstrap support for A8JDQ4 as seed ortholog is 100%.
Bootstrap support for Q4UDH7 as seed ortholog is 100%.

Group of orthologs #64. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 T.annulata:381

A8JBN7              	100.00%		Q4UHV5              	100.00%
Bootstrap support for A8JBN7 as seed ortholog is 100%.
Bootstrap support for Q4UHV5 as seed ortholog is 100%.

Group of orthologs #65. Best score 549 bits
Score difference with first non-orthologous sequence - C.reinhardtii:549 T.annulata:277

A8J3N3              	100.00%		Q4UBP8              	100.00%
Bootstrap support for A8J3N3 as seed ortholog is 100%.
Bootstrap support for Q4UBP8 as seed ortholog is 100%.

Group of orthologs #66. Best score 548 bits
Score difference with first non-orthologous sequence - C.reinhardtii:548 T.annulata:548

A8J6S7              	100.00%		Q4U9P2              	100.00%
Bootstrap support for A8J6S7 as seed ortholog is 100%.
Bootstrap support for Q4U9P2 as seed ortholog is 100%.

Group of orthologs #67. Best score 548 bits
Score difference with first non-orthologous sequence - C.reinhardtii:548 T.annulata:548

A8JG58              	100.00%		Q4UH14              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for Q4UH14 as seed ortholog is 100%.

Group of orthologs #68. Best score 547 bits
Score difference with first non-orthologous sequence - C.reinhardtii:547 T.annulata:547

A8IED9              	100.00%		Q4UEL2              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for Q4UEL2 as seed ortholog is 100%.

Group of orthologs #69. Best score 544 bits
Score difference with first non-orthologous sequence - C.reinhardtii:544 T.annulata:316

A8JF35              	100.00%		Q4UIP5              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for Q4UIP5 as seed ortholog is 100%.

Group of orthologs #70. Best score 542 bits
Score difference with first non-orthologous sequence - C.reinhardtii:495 T.annulata:542

A8J014              	100.00%		Q4UFR9              	100.00%
Bootstrap support for A8J014 as seed ortholog is 100%.
Bootstrap support for Q4UFR9 as seed ortholog is 100%.

Group of orthologs #71. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:540 T.annulata:540

A8JH98              	100.00%		Q4U8Y7              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for Q4U8Y7 as seed ortholog is 100%.

Group of orthologs #72. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 T.annulata:339

A8J7C8              	100.00%		Q4UC52              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 100%.
Bootstrap support for Q4UC52 as seed ortholog is 100%.

Group of orthologs #73. Best score 535 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:433

A8IU68              	100.00%		Q4U8V3              	100.00%
Bootstrap support for A8IU68 as seed ortholog is 94%.
Bootstrap support for Q4U8V3 as seed ortholog is 100%.

Group of orthologs #74. Best score 528 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 T.annulata:210

A8IMK1              	100.00%		Q4UAL9              	100.00%
Bootstrap support for A8IMK1 as seed ortholog is 98%.
Bootstrap support for Q4UAL9 as seed ortholog is 100%.

Group of orthologs #75. Best score 525 bits
Score difference with first non-orthologous sequence - C.reinhardtii:525 T.annulata:525

A8J0N7              	100.00%		Q4UH39              	100.00%
Bootstrap support for A8J0N7 as seed ortholog is 100%.
Bootstrap support for Q4UH39 as seed ortholog is 100%.

Group of orthologs #76. Best score 522 bits
Score difference with first non-orthologous sequence - C.reinhardtii:522 T.annulata:522

A8JGS8              	100.00%		Q4UGX0              	100.00%
Bootstrap support for A8JGS8 as seed ortholog is 100%.
Bootstrap support for Q4UGX0 as seed ortholog is 100%.

Group of orthologs #77. Best score 521 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:190

A8HQA8              	100.00%		Q4U9B5              	100.00%
Bootstrap support for A8HQA8 as seed ortholog is 99%.
Bootstrap support for Q4U9B5 as seed ortholog is 100%.

Group of orthologs #78. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 T.annulata:314

A8IBD5              	100.00%		Q4UHZ3              	100.00%
Bootstrap support for A8IBD5 as seed ortholog is 99%.
Bootstrap support for Q4UHZ3 as seed ortholog is 100%.

Group of orthologs #79. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:520 T.annulata:520

A8JHA4              	100.00%		Q4UG46              	100.00%
Bootstrap support for A8JHA4 as seed ortholog is 100%.
Bootstrap support for Q4UG46 as seed ortholog is 100%.

Group of orthologs #80. Best score 519 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 T.annulata:74

A8IHD9              	100.00%		Q4UH89              	100.00%
                    	       		Q4UIK9              	100.00%
                    	       		Q4UHH1              	6.89%
Bootstrap support for A8IHD9 as seed ortholog is 97%.
Bootstrap support for Q4UH89 as seed ortholog is 88%.
Bootstrap support for Q4UIK9 as seed ortholog is 93%.

Group of orthologs #81. Best score 518 bits
Score difference with first non-orthologous sequence - C.reinhardtii:518 T.annulata:518

A8I4S9              	100.00%		Q4UBV3              	100.00%
Bootstrap support for A8I4S9 as seed ortholog is 100%.
Bootstrap support for Q4UBV3 as seed ortholog is 100%.

Group of orthologs #82. Best score 515 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 T.annulata:345

A8IP17              	100.00%		Q4UDI3              	100.00%
Bootstrap support for A8IP17 as seed ortholog is 100%.
Bootstrap support for Q4UDI3 as seed ortholog is 100%.

Group of orthologs #83. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 T.annulata:179

A8HPT4              	100.00%		Q4UED3              	100.00%
Bootstrap support for A8HPT4 as seed ortholog is 98%.
Bootstrap support for Q4UED3 as seed ortholog is 99%.

Group of orthologs #84. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 T.annulata:514

A8HVM3              	100.00%		Q4UIF0              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 99%.
Bootstrap support for Q4UIF0 as seed ortholog is 100%.

Group of orthologs #85. Best score 513 bits
Score difference with first non-orthologous sequence - C.reinhardtii:471 T.annulata:513

A8J9S7              	100.00%		Q4U966              	100.00%
Bootstrap support for A8J9S7 as seed ortholog is 100%.
Bootstrap support for Q4U966 as seed ortholog is 100%.

Group of orthologs #86. Best score 513 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 T.annulata:386

A8JCF0              	100.00%		Q4UEN3              	100.00%
Bootstrap support for A8JCF0 as seed ortholog is 100%.
Bootstrap support for Q4UEN3 as seed ortholog is 100%.

Group of orthologs #87. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 T.annulata:510

Q9XGU3              	100.00%		Q4UE52              	100.00%
Bootstrap support for Q9XGU3 as seed ortholog is 100%.
Bootstrap support for Q4UE52 as seed ortholog is 100%.

Group of orthologs #88. Best score 509 bits
Score difference with first non-orthologous sequence - C.reinhardtii:509 T.annulata:509

A8J3A4              	100.00%		Q4UHP5              	100.00%
Bootstrap support for A8J3A4 as seed ortholog is 100%.
Bootstrap support for Q4UHP5 as seed ortholog is 100%.

Group of orthologs #89. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 T.annulata:170

A8J8G9              	100.00%		Q4UBV4              	100.00%
A8IVJ6              	7.77%		
A8IVJ3              	6.36%		
Bootstrap support for A8J8G9 as seed ortholog is 100%.
Bootstrap support for Q4UBV4 as seed ortholog is 92%.

Group of orthologs #90. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:507

A8HYH7              	100.00%		Q4UGL8              	100.00%
Bootstrap support for A8HYH7 as seed ortholog is 99%.
Bootstrap support for Q4UGL8 as seed ortholog is 100%.

Group of orthologs #91. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 T.annulata:507

A8II42              	100.00%		Q4UAK0              	100.00%
Bootstrap support for A8II42 as seed ortholog is 100%.
Bootstrap support for Q4UAK0 as seed ortholog is 100%.

Group of orthologs #92. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 T.annulata:198

A8IR41              	100.00%		Q4UAE5              	100.00%
Bootstrap support for A8IR41 as seed ortholog is 100%.
Bootstrap support for Q4UAE5 as seed ortholog is 100%.

Group of orthologs #93. Best score 497 bits
Score difference with first non-orthologous sequence - C.reinhardtii:412 T.annulata:497

A8J4L1              	100.00%		Q4U8J4              	100.00%
Bootstrap support for A8J4L1 as seed ortholog is 100%.
Bootstrap support for Q4U8J4 as seed ortholog is 100%.

Group of orthologs #94. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 T.annulata:495

A8HP46              	100.00%		Q4UEH9              	100.00%
Bootstrap support for A8HP46 as seed ortholog is 100%.
Bootstrap support for Q4UEH9 as seed ortholog is 100%.

Group of orthologs #95. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 T.annulata:328

A8I675              	100.00%		Q4U8M6              	100.00%
Bootstrap support for A8I675 as seed ortholog is 100%.
Bootstrap support for Q4U8M6 as seed ortholog is 100%.

Group of orthologs #96. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:495 T.annulata:495

A8J4W8              	100.00%		Q4U921              	100.00%
Bootstrap support for A8J4W8 as seed ortholog is 100%.
Bootstrap support for Q4U921 as seed ortholog is 100%.

Group of orthologs #97. Best score 494 bits
Score difference with first non-orthologous sequence - C.reinhardtii:494 T.annulata:494

A8IE23              	100.00%		Q4UC94              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for Q4UC94 as seed ortholog is 100%.

Group of orthologs #98. Best score 492 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 T.annulata:333

A8JIJ1              	100.00%		Q4UC68              	100.00%
Bootstrap support for A8JIJ1 as seed ortholog is 100%.
Bootstrap support for Q4UC68 as seed ortholog is 100%.

Group of orthologs #99. Best score 490 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 T.annulata:400

A8JF80              	100.00%		Q4U925              	100.00%
Bootstrap support for A8JF80 as seed ortholog is 99%.
Bootstrap support for Q4U925 as seed ortholog is 100%.

Group of orthologs #100. Best score 487 bits
Score difference with first non-orthologous sequence - C.reinhardtii:487 T.annulata:487

A8JFK4              	100.00%		Q4UGW7              	100.00%
A8J4R9              	13.71%		
Q8W4V3              	13.50%		
Bootstrap support for A8JFK4 as seed ortholog is 100%.
Bootstrap support for Q4UGW7 as seed ortholog is 100%.

Group of orthologs #101. Best score 486 bits
Score difference with first non-orthologous sequence - C.reinhardtii:486 T.annulata:486

A8INS0              	100.00%		Q4UCT3              	100.00%
Bootstrap support for A8INS0 as seed ortholog is 100%.
Bootstrap support for Q4UCT3 as seed ortholog is 100%.

Group of orthologs #102. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:485 T.annulata:485

A8JIR0              	100.00%		Q4UD12              	100.00%
Bootstrap support for A8JIR0 as seed ortholog is 100%.
Bootstrap support for Q4UD12 as seed ortholog is 100%.

Group of orthologs #103. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 T.annulata:483

A8JDN1              	100.00%		Q4UDB0              	100.00%
Bootstrap support for A8JDN1 as seed ortholog is 99%.
Bootstrap support for Q4UDB0 as seed ortholog is 100%.

Group of orthologs #104. Best score 481 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 T.annulata:481

A8J9Q1              	100.00%		Q4U8E7              	100.00%
Bootstrap support for A8J9Q1 as seed ortholog is 100%.
Bootstrap support for Q4U8E7 as seed ortholog is 100%.

Group of orthologs #105. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 T.annulata:480

A8JDP3              	100.00%		Q4UCL9              	100.00%
Bootstrap support for A8JDP3 as seed ortholog is 100%.
Bootstrap support for Q4UCL9 as seed ortholog is 100%.

Group of orthologs #106. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 T.annulata:480

A8JHE3              	100.00%		Q4U9Z4              	100.00%
Bootstrap support for A8JHE3 as seed ortholog is 100%.
Bootstrap support for Q4U9Z4 as seed ortholog is 100%.

Group of orthologs #107. Best score 478 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 T.annulata:341

A8I8N8              	100.00%		Q4U9Q4              	100.00%
Bootstrap support for A8I8N8 as seed ortholog is 99%.
Bootstrap support for Q4U9Q4 as seed ortholog is 100%.

Group of orthologs #108. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 T.annulata:140

A8J040              	100.00%		Q4UJ01              	100.00%
Bootstrap support for A8J040 as seed ortholog is 99%.
Bootstrap support for Q4UJ01 as seed ortholog is 96%.

Group of orthologs #109. Best score 473 bits
Score difference with first non-orthologous sequence - C.reinhardtii:392 T.annulata:473

A8IYG8              	100.00%		Q4UCC5              	100.00%
Bootstrap support for A8IYG8 as seed ortholog is 100%.
Bootstrap support for Q4UCC5 as seed ortholog is 100%.

Group of orthologs #110. Best score 466 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 T.annulata:146

A8J6K6              	100.00%		Q4UDK3              	100.00%
Bootstrap support for A8J6K6 as seed ortholog is 99%.
Bootstrap support for Q4UDK3 as seed ortholog is 99%.

Group of orthologs #111. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 T.annulata:465

A8HS79              	100.00%		Q4UI41              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 100%.
Bootstrap support for Q4UI41 as seed ortholog is 100%.

Group of orthologs #112. Best score 462 bits
Score difference with first non-orthologous sequence - C.reinhardtii:462 T.annulata:462

A8HXM5              	100.00%		Q4UJ48              	100.00%
Bootstrap support for A8HXM5 as seed ortholog is 100%.
Bootstrap support for Q4UJ48 as seed ortholog is 100%.

Group of orthologs #113. Best score 462 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 T.annulata:204

A8IDL8              	100.00%		Q4UDH3              	100.00%
Bootstrap support for A8IDL8 as seed ortholog is 99%.
Bootstrap support for Q4UDH3 as seed ortholog is 100%.

Group of orthologs #114. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:452 T.annulata:452

A8IIG8              	100.00%		Q4UIX0              	100.00%
Bootstrap support for A8IIG8 as seed ortholog is 100%.
Bootstrap support for Q4UIX0 as seed ortholog is 100%.

Group of orthologs #115. Best score 451 bits
Score difference with first non-orthologous sequence - C.reinhardtii:451 T.annulata:451

A8JH25              	100.00%		Q4UBN2              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 100%.
Bootstrap support for Q4UBN2 as seed ortholog is 100%.

Group of orthologs #116. Best score 450 bits
Score difference with first non-orthologous sequence - C.reinhardtii:450 T.annulata:450

A8HYU5              	100.00%		Q4U8G4              	100.00%
Bootstrap support for A8HYU5 as seed ortholog is 100%.
Bootstrap support for Q4U8G4 as seed ortholog is 100%.

Group of orthologs #117. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 T.annulata:447

A8HXR2              	100.00%		Q4UB84              	100.00%
P17746              	12.35%		
Bootstrap support for A8HXR2 as seed ortholog is 100%.
Bootstrap support for Q4UB84 as seed ortholog is 100%.

Group of orthologs #118. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:447 T.annulata:308

A8J387              	100.00%		Q4U9S4              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for Q4U9S4 as seed ortholog is 100%.

Group of orthologs #119. Best score 445 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 T.annulata:445

A8J3G7              	100.00%		Q4UDA7              	100.00%
Bootstrap support for A8J3G7 as seed ortholog is 69%.
Alternative seed ortholog is A8J122 (18 bits away from this cluster)
Bootstrap support for Q4UDA7 as seed ortholog is 100%.

Group of orthologs #120. Best score 444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 T.annulata:153

A8IBY2              	100.00%		Q4UBV5              	100.00%
Bootstrap support for A8IBY2 as seed ortholog is 99%.
Bootstrap support for Q4UBV5 as seed ortholog is 99%.

Group of orthologs #121. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 T.annulata:443

A8J280              	100.00%		Q4U9F7              	100.00%
Bootstrap support for A8J280 as seed ortholog is 100%.
Bootstrap support for Q4U9F7 as seed ortholog is 100%.

Group of orthologs #122. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 T.annulata:441

A8J940              	100.00%		Q4U999              	100.00%
Bootstrap support for A8J940 as seed ortholog is 100%.
Bootstrap support for Q4U999 as seed ortholog is 100%.

Group of orthologs #123. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:440 T.annulata:440

A8I793              	100.00%		Q4U9X6              	100.00%
Bootstrap support for A8I793 as seed ortholog is 100%.
Bootstrap support for Q4U9X6 as seed ortholog is 100%.

Group of orthologs #124. Best score 437 bits
Score difference with first non-orthologous sequence - C.reinhardtii:437 T.annulata:437

A8I0Z4              	100.00%		Q4UDV2              	100.00%
Bootstrap support for A8I0Z4 as seed ortholog is 100%.
Bootstrap support for Q4UDV2 as seed ortholog is 100%.

Group of orthologs #125. Best score 435 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 T.annulata:382

A8IBN3              	100.00%		Q4UGB9              	100.00%
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for Q4UGB9 as seed ortholog is 100%.

Group of orthologs #126. Best score 433 bits
Score difference with first non-orthologous sequence - C.reinhardtii:433 T.annulata:433

A8IDM1              	100.00%		Q4UDP8              	100.00%
Bootstrap support for A8IDM1 as seed ortholog is 100%.
Bootstrap support for Q4UDP8 as seed ortholog is 100%.

Group of orthologs #127. Best score 432 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 T.annulata:432

A8IWV0              	100.00%		Q4UIQ1              	100.00%
Bootstrap support for A8IWV0 as seed ortholog is 100%.
Bootstrap support for Q4UIQ1 as seed ortholog is 100%.

Group of orthologs #128. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:428 T.annulata:428

A8IHM8              	100.00%		Q4UFS6              	100.00%
Bootstrap support for A8IHM8 as seed ortholog is 100%.
Bootstrap support for Q4UFS6 as seed ortholog is 100%.

Group of orthologs #129. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 T.annulata:217

A8JCM3              	100.00%		Q4UE18              	100.00%
Bootstrap support for A8JCM3 as seed ortholog is 99%.
Bootstrap support for Q4UE18 as seed ortholog is 100%.

Group of orthologs #130. Best score 427 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 T.annulata:221

A8IWJ5              	100.00%		Q4UFA0              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 100%.
Bootstrap support for Q4UFA0 as seed ortholog is 100%.

Group of orthologs #131. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 T.annulata:24

A8HS40              	100.00%		Q4U9H5              	100.00%
Bootstrap support for A8HS40 as seed ortholog is 89%.
Bootstrap support for Q4U9H5 as seed ortholog is 74%.
Alternative seed ortholog is Q4UIW8 (24 bits away from this cluster)

Group of orthologs #132. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 T.annulata:309

A8HXA2              	100.00%		Q4UHP8              	100.00%
Bootstrap support for A8HXA2 as seed ortholog is 99%.
Bootstrap support for Q4UHP8 as seed ortholog is 100%.

Group of orthologs #133. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 T.annulata:256

A8IVR6              	100.00%		Q4U977              	100.00%
Bootstrap support for A8IVR6 as seed ortholog is 99%.
Bootstrap support for Q4U977 as seed ortholog is 100%.

Group of orthologs #134. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:328 T.annulata:425

A8JI26              	100.00%		Q4UC66              	100.00%
Bootstrap support for A8JI26 as seed ortholog is 100%.
Bootstrap support for Q4UC66 as seed ortholog is 100%.

Group of orthologs #135. Best score 424 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:172

A8IJV1              	100.00%		Q4UF83              	100.00%
Bootstrap support for A8IJV1 as seed ortholog is 99%.
Bootstrap support for Q4UF83 as seed ortholog is 100%.

Group of orthologs #136. Best score 422 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 T.annulata:117

A8J6S4              	100.00%		Q4UEG2              	100.00%
Q6VTH1              	6.30%		
Bootstrap support for A8J6S4 as seed ortholog is 100%.
Bootstrap support for Q4UEG2 as seed ortholog is 99%.

Group of orthologs #137. Best score 422 bits
Score difference with first non-orthologous sequence - C.reinhardtii:422 T.annulata:422

A8IID0              	100.00%		Q4UEQ5              	100.00%
Bootstrap support for A8IID0 as seed ortholog is 100%.
Bootstrap support for Q4UEQ5 as seed ortholog is 100%.

Group of orthologs #138. Best score 419 bits
Score difference with first non-orthologous sequence - C.reinhardtii:419 T.annulata:419

A8J146              	100.00%		Q4UB69              	100.00%
Bootstrap support for A8J146 as seed ortholog is 100%.
Bootstrap support for Q4UB69 as seed ortholog is 100%.

Group of orthologs #139. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:418 T.annulata:418

A8JHU7              	100.00%		Q4UI21              	100.00%
A8IUF0              	23.67%		
A8J1M5              	21.74%		
A8J063              	19.68%		
A8I5C3              	19.53%		
A8I3X6              	19.08%		
A8ISA6              	18.45%		
A8IV22              	18.06%		
A8IYR9              	17.73%		
A8J336              	17.53%		
A8I3V9              	15.52%		
A8JFP1              	15.15%		
A8HWS1              	12.43%		
Q9SMH5              	10.91%		
A8IP72              	8.36%		
Bootstrap support for A8JHU7 as seed ortholog is 100%.
Bootstrap support for Q4UI21 as seed ortholog is 100%.

Group of orthologs #140. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 T.annulata:339

A8J1X8              	100.00%		Q4UBU0              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 100%.
Bootstrap support for Q4UBU0 as seed ortholog is 100%.

Group of orthologs #141. Best score 416 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 T.annulata:416

A8JBP0              	100.00%		Q4UFJ2              	100.00%
Bootstrap support for A8JBP0 as seed ortholog is 99%.
Bootstrap support for Q4UFJ2 as seed ortholog is 100%.

Group of orthologs #142. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 T.annulata:415

A8JAP7              	100.00%		Q4UCL4              	100.00%
Bootstrap support for A8JAP7 as seed ortholog is 100%.
Bootstrap support for Q4UCL4 as seed ortholog is 100%.

Group of orthologs #143. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 T.annulata:414

A8JHR9              	100.00%		Q4U9T0              	100.00%
                    	       		Q4UFJ5              	11.74%
Bootstrap support for A8JHR9 as seed ortholog is 99%.
Bootstrap support for Q4U9T0 as seed ortholog is 100%.

Group of orthologs #144. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:297

A8IE89              	100.00%		Q4UIN6              	100.00%
Bootstrap support for A8IE89 as seed ortholog is 92%.
Bootstrap support for Q4UIN6 as seed ortholog is 100%.

Group of orthologs #145. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:410

A8J4M4              	100.00%		Q4UHQ8              	100.00%
A8J4M6              	69.28%		
Bootstrap support for A8J4M4 as seed ortholog is 90%.
Bootstrap support for Q4UHQ8 as seed ortholog is 100%.

Group of orthologs #146. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 T.annulata:363

A8HZA9              	100.00%		Q4U918              	100.00%
Bootstrap support for A8HZA9 as seed ortholog is 100%.
Bootstrap support for Q4U918 as seed ortholog is 100%.

Group of orthologs #147. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 T.annulata:408

A8HPZ4              	100.00%		Q4UHR0              	100.00%
Bootstrap support for A8HPZ4 as seed ortholog is 99%.
Bootstrap support for Q4UHR0 as seed ortholog is 100%.

Group of orthologs #148. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 T.annulata:408

A8JGX1              	100.00%		Q4UIR6              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for Q4UIR6 as seed ortholog is 100%.

Group of orthologs #149. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 T.annulata:406

A8J9E6              	100.00%		Q4UBJ1              	100.00%
Bootstrap support for A8J9E6 as seed ortholog is 100%.
Bootstrap support for Q4UBJ1 as seed ortholog is 100%.

Group of orthologs #150. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:328 T.annulata:404

A8HYC0              	100.00%		Q4U9I1              	100.00%
Bootstrap support for A8HYC0 as seed ortholog is 100%.
Bootstrap support for Q4U9I1 as seed ortholog is 100%.

Group of orthologs #151. Best score 402 bits
Score difference with first non-orthologous sequence - C.reinhardtii:402 T.annulata:402

A8ITK3              	100.00%		Q4UF66              	100.00%
Bootstrap support for A8ITK3 as seed ortholog is 100%.
Bootstrap support for Q4UF66 as seed ortholog is 100%.

Group of orthologs #152. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 T.annulata:398

A8HPR5              	100.00%		Q4UDC3              	100.00%
A8J484              	39.73%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for Q4UDC3 as seed ortholog is 100%.

Group of orthologs #153. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 T.annulata:398

A8I495              	100.00%		Q4UBH7              	100.00%
Bootstrap support for A8I495 as seed ortholog is 100%.
Bootstrap support for Q4UBH7 as seed ortholog is 100%.

Group of orthologs #154. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 T.annulata:398

A8HS05              	100.00%		Q4UG43              	100.00%
Bootstrap support for A8HS05 as seed ortholog is 100%.
Bootstrap support for Q4UG43 as seed ortholog is 100%.

Group of orthologs #155. Best score 397 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 T.annulata:397

A8J448              	100.00%		Q4UCW3              	100.00%
Bootstrap support for A8J448 as seed ortholog is 99%.
Bootstrap support for Q4UCW3 as seed ortholog is 100%.

Group of orthologs #156. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 T.annulata:396

A8JD96              	100.00%		Q4U9G5              	100.00%
Bootstrap support for A8JD96 as seed ortholog is 100%.
Bootstrap support for Q4U9G5 as seed ortholog is 100%.

Group of orthologs #157. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 T.annulata:396

A8JHC9              	100.00%		Q4UF22              	100.00%
Bootstrap support for A8JHC9 as seed ortholog is 100%.
Bootstrap support for Q4UF22 as seed ortholog is 100%.

Group of orthologs #158. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:394 T.annulata:394

A8JFW4              	100.00%		Q4UH63              	100.00%
Bootstrap support for A8JFW4 as seed ortholog is 100%.
Bootstrap support for Q4UH63 as seed ortholog is 100%.

Group of orthologs #159. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 T.annulata:393

A8HPA0              	100.00%		Q4UDQ1              	100.00%
Bootstrap support for A8HPA0 as seed ortholog is 100%.
Bootstrap support for Q4UDQ1 as seed ortholog is 100%.

Group of orthologs #160. Best score 391 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 T.annulata:391

A8IF08              	100.00%		Q4UIV8              	100.00%
Bootstrap support for A8IF08 as seed ortholog is 100%.
Bootstrap support for Q4UIV8 as seed ortholog is 100%.

Group of orthologs #161. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:389 T.annulata:389

A8IWJ8              	100.00%		Q4U924              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for Q4U924 as seed ortholog is 100%.

Group of orthologs #162. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 T.annulata:331

A8J8Y1              	100.00%		Q4UA19              	100.00%
Bootstrap support for A8J8Y1 as seed ortholog is 100%.
Bootstrap support for Q4UA19 as seed ortholog is 100%.

Group of orthologs #163. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 T.annulata:388

A8J5U1              	100.00%		Q4UH65              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for Q4UH65 as seed ortholog is 100%.

Group of orthologs #164. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 T.annulata:265

A8ILR9              	100.00%		Q4UHR4              	100.00%
A8IKH1              	14.36%		
Bootstrap support for A8ILR9 as seed ortholog is 100%.
Bootstrap support for Q4UHR4 as seed ortholog is 100%.

Group of orthologs #165. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 T.annulata:231

A8JCK3              	100.00%		Q4UCF8              	100.00%
A8JAY4              	5.69%		
Bootstrap support for A8JCK3 as seed ortholog is 100%.
Bootstrap support for Q4UCF8 as seed ortholog is 100%.

Group of orthologs #166. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 T.annulata:383

A8HME6              	100.00%		Q4UID9              	100.00%
Bootstrap support for A8HME6 as seed ortholog is 100%.
Bootstrap support for Q4UID9 as seed ortholog is 100%.

Group of orthologs #167. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 T.annulata:149

A8INY3              	100.00%		Q4UCK3              	100.00%
Bootstrap support for A8INY3 as seed ortholog is 100%.
Bootstrap support for Q4UCK3 as seed ortholog is 99%.

Group of orthologs #168. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 T.annulata:383

A8J5K4              	100.00%		Q4UHT6              	100.00%
Bootstrap support for A8J5K4 as seed ortholog is 100%.
Bootstrap support for Q4UHT6 as seed ortholog is 100%.

Group of orthologs #169. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 T.annulata:298

A8HVL4              	100.00%		Q4UER5              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 100%.
Bootstrap support for Q4UER5 as seed ortholog is 100%.

Group of orthologs #170. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 T.annulata:52

A8J8K0              	100.00%		Q4UIV0              	100.00%
Bootstrap support for A8J8K0 as seed ortholog is 100%.
Bootstrap support for Q4UIV0 as seed ortholog is 81%.

Group of orthologs #171. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 T.annulata:381

A8IST3              	100.00%		Q4U8W2              	100.00%
A8J1K0              	47.26%		
A8J9X3              	36.28%		
Bootstrap support for A8IST3 as seed ortholog is 100%.
Bootstrap support for Q4U8W2 as seed ortholog is 100%.

Group of orthologs #172. Best score 380 bits
Score difference with first non-orthologous sequence - C.reinhardtii:380 T.annulata:380

A8IBR6              	100.00%		Q4UAG1              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for Q4UAG1 as seed ortholog is 100%.

Group of orthologs #173. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:376 T.annulata:376

A8HNE3              	100.00%		Q4U9P3              	100.00%
Bootstrap support for A8HNE3 as seed ortholog is 100%.
Bootstrap support for Q4U9P3 as seed ortholog is 100%.

Group of orthologs #174. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 T.annulata:374

A8JC04              	100.00%		Q4UIF9              	100.00%
Bootstrap support for A8JC04 as seed ortholog is 99%.
Bootstrap support for Q4UIF9 as seed ortholog is 100%.

Group of orthologs #175. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 T.annulata:371

A8IRV0              	100.00%		Q4UBI5              	100.00%
Bootstrap support for A8IRV0 as seed ortholog is 100%.
Bootstrap support for Q4UBI5 as seed ortholog is 100%.

Group of orthologs #176. Best score 368 bits
Score difference with first non-orthologous sequence - C.reinhardtii:368 T.annulata:368

A8IM71              	100.00%		Q4UA11              	100.00%
Bootstrap support for A8IM71 as seed ortholog is 100%.
Bootstrap support for Q4UA11 as seed ortholog is 100%.

Group of orthologs #177. Best score 368 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 T.annulata:368

A8J1T4              	100.00%		Q4UCK8              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 100%.
Bootstrap support for Q4UCK8 as seed ortholog is 100%.

Group of orthologs #178. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 T.annulata:366

A8I093              	100.00%		Q4UI04              	100.00%
Bootstrap support for A8I093 as seed ortholog is 100%.
Bootstrap support for Q4UI04 as seed ortholog is 100%.

Group of orthologs #179. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:364 T.annulata:364

A8HYQ1              	100.00%		Q4UDC2              	100.00%
Bootstrap support for A8HYQ1 as seed ortholog is 100%.
Bootstrap support for Q4UDC2 as seed ortholog is 100%.

Group of orthologs #180. Best score 360 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 T.annulata:137

A8J1Z0              	100.00%		Q4UAM2              	100.00%
Bootstrap support for A8J1Z0 as seed ortholog is 99%.
Bootstrap support for Q4UAM2 as seed ortholog is 100%.

Group of orthologs #181. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 T.annulata:90

A8J510              	100.00%		Q4UH46              	100.00%
Bootstrap support for A8J510 as seed ortholog is 100%.
Bootstrap support for Q4UH46 as seed ortholog is 93%.

Group of orthologs #182. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 T.annulata:358

A8J168              	100.00%		Q4U964              	100.00%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for Q4U964 as seed ortholog is 100%.

Group of orthologs #183. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 T.annulata:355

A8HX38              	100.00%		Q4UHR5              	100.00%
Bootstrap support for A8HX38 as seed ortholog is 99%.
Bootstrap support for Q4UHR5 as seed ortholog is 100%.

Group of orthologs #184. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 T.annulata:354

A8IXE0              	100.00%		Q4UCR8              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for Q4UCR8 as seed ortholog is 100%.

Group of orthologs #185. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 T.annulata:353

A8J5P7              	100.00%		Q4UGA3              	100.00%
Bootstrap support for A8J5P7 as seed ortholog is 100%.
Bootstrap support for Q4UGA3 as seed ortholog is 100%.

Group of orthologs #186. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 T.annulata:173

A8JHL1              	100.00%		Q4UFM6              	100.00%
Bootstrap support for A8JHL1 as seed ortholog is 100%.
Bootstrap support for Q4UFM6 as seed ortholog is 100%.

Group of orthologs #187. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 T.annulata:351

A8IVK1              	100.00%		Q4UIP3              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 100%.
Bootstrap support for Q4UIP3 as seed ortholog is 100%.

Group of orthologs #188. Best score 350 bits
Score difference with first non-orthologous sequence - C.reinhardtii:350 T.annulata:350

A8JH58              	100.00%		Q4UG75              	100.00%
                    	       		Q4UH68              	18.41%
Bootstrap support for A8JH58 as seed ortholog is 100%.
Bootstrap support for Q4UG75 as seed ortholog is 100%.

Group of orthologs #189. Best score 348 bits
Score difference with first non-orthologous sequence - C.reinhardtii:348 T.annulata:348

A8J2R6              	100.00%		Q4U994              	100.00%
Bootstrap support for A8J2R6 as seed ortholog is 100%.
Bootstrap support for Q4U994 as seed ortholog is 100%.

Group of orthologs #190. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 T.annulata:114

A8IPH5              	100.00%		Q4UH54              	100.00%
Bootstrap support for A8IPH5 as seed ortholog is 90%.
Bootstrap support for Q4UH54 as seed ortholog is 96%.

Group of orthologs #191. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 T.annulata:346

A8JCG5              	100.00%		Q4UC08              	100.00%
Bootstrap support for A8JCG5 as seed ortholog is 100%.
Bootstrap support for Q4UC08 as seed ortholog is 100%.

Group of orthologs #192. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 T.annulata:264

A8J8V7              	100.00%		Q4U943              	100.00%
Bootstrap support for A8J8V7 as seed ortholog is 100%.
Bootstrap support for Q4U943 as seed ortholog is 100%.

Group of orthologs #193. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 T.annulata:187

Q6Q242              	100.00%		Q4UA75              	100.00%
A8JDI7              	5.92%		
Bootstrap support for Q6Q242 as seed ortholog is 100%.
Bootstrap support for Q4UA75 as seed ortholog is 100%.

Group of orthologs #194. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 T.annulata:336

A8J2Z8              	100.00%		Q4U9U4              	100.00%
Bootstrap support for A8J2Z8 as seed ortholog is 100%.
Bootstrap support for Q4U9U4 as seed ortholog is 100%.

Group of orthologs #195. Best score 333 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 T.annulata:130

A8I1P3              	100.00%		Q26671              	100.00%
Bootstrap support for A8I1P3 as seed ortholog is 77%.
Bootstrap support for Q26671 as seed ortholog is 99%.

Group of orthologs #196. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 T.annulata:329

A8IRT6              	100.00%		Q4UCK4              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for Q4UCK4 as seed ortholog is 100%.

Group of orthologs #197. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 T.annulata:329

A8JHC1              	100.00%		Q4UC05              	100.00%
Bootstrap support for A8JHC1 as seed ortholog is 100%.
Bootstrap support for Q4UC05 as seed ortholog is 100%.

Group of orthologs #198. Best score 328 bits
Score difference with first non-orthologous sequence - C.reinhardtii:328 T.annulata:328

A8IA86              	100.00%		Q4U8Q0              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for Q4U8Q0 as seed ortholog is 100%.

Group of orthologs #199. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 T.annulata:327

A8I9B8              	100.00%		Q4UGQ4              	100.00%
Bootstrap support for A8I9B8 as seed ortholog is 73%.
Alternative seed ortholog is A8HNV3 (30 bits away from this cluster)
Bootstrap support for Q4UGQ4 as seed ortholog is 100%.

Group of orthologs #200. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 T.annulata:325

A8IKA1              	100.00%		Q4UEY7              	100.00%
Bootstrap support for A8IKA1 as seed ortholog is 100%.
Bootstrap support for Q4UEY7 as seed ortholog is 100%.

Group of orthologs #201. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 T.annulata:142

A8IUN1              	100.00%		Q4UIQ6              	100.00%
Bootstrap support for A8IUN1 as seed ortholog is 100%.
Bootstrap support for Q4UIQ6 as seed ortholog is 99%.

Group of orthologs #202. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 T.annulata:146

A8JHA8              	100.00%		Q4UCN5              	100.00%
Bootstrap support for A8JHA8 as seed ortholog is 100%.
Bootstrap support for Q4UCN5 as seed ortholog is 99%.

Group of orthologs #203. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 T.annulata:324

A8IK52              	100.00%		Q4UAY2              	100.00%
Bootstrap support for A8IK52 as seed ortholog is 100%.
Bootstrap support for Q4UAY2 as seed ortholog is 100%.

Group of orthologs #204. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 T.annulata:220

A8ITS8              	100.00%		Q4UGK1              	100.00%
Bootstrap support for A8ITS8 as seed ortholog is 99%.
Bootstrap support for Q4UGK1 as seed ortholog is 100%.

Group of orthologs #205. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 T.annulata:189

Q6IV67              	100.00%		Q4UD13              	100.00%
Bootstrap support for Q6IV67 as seed ortholog is 99%.
Bootstrap support for Q4UD13 as seed ortholog is 99%.

Group of orthologs #206. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 T.annulata:321

A8IEF3              	100.00%		Q4UDF2              	100.00%
Bootstrap support for A8IEF3 as seed ortholog is 99%.
Bootstrap support for Q4UDF2 as seed ortholog is 100%.

Group of orthologs #207. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 T.annulata:320

A8IMP6              	100.00%		Q4U904              	100.00%
Bootstrap support for A8IMP6 as seed ortholog is 100%.
Bootstrap support for Q4U904 as seed ortholog is 100%.

Group of orthologs #208. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 T.annulata:131

A8I985              	100.00%		Q4UG55              	100.00%
Bootstrap support for A8I985 as seed ortholog is 100%.
Bootstrap support for Q4UG55 as seed ortholog is 99%.

Group of orthologs #209. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 T.annulata:319

A8HS48              	100.00%		Q4UB86              	100.00%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for Q4UB86 as seed ortholog is 100%.

Group of orthologs #210. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 T.annulata:319

A8HME4              	100.00%		Q4UFV1              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for Q4UFV1 as seed ortholog is 100%.

Group of orthologs #211. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 T.annulata:29

A8HSJ3              	100.00%		Q4UIR7              	100.00%
                    	       		Q4UIH6              	16.14%
Bootstrap support for A8HSJ3 as seed ortholog is 98%.
Bootstrap support for Q4UIR7 as seed ortholog is 76%.

Group of orthologs #212. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 T.annulata:318

A8IW34              	100.00%		Q4UAQ0              	100.00%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for Q4UAQ0 as seed ortholog is 100%.

Group of orthologs #213. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:316 T.annulata:316

Q84UB2              	100.00%		Q4UI52              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for Q4UI52 as seed ortholog is 100%.

Group of orthologs #214. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 T.annulata:315

A8HPU4              	100.00%		Q4UGF0              	100.00%
Bootstrap support for A8HPU4 as seed ortholog is 100%.
Bootstrap support for Q4UGF0 as seed ortholog is 100%.

Group of orthologs #215. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 T.annulata:315

A8J386              	100.00%		Q4UHT8              	100.00%
Bootstrap support for A8J386 as seed ortholog is 100%.
Bootstrap support for Q4UHT8 as seed ortholog is 100%.

Group of orthologs #216. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 T.annulata:121

A8JFV3              	100.00%		Q4U9C6              	100.00%
Bootstrap support for A8JFV3 as seed ortholog is 98%.
Bootstrap support for Q4U9C6 as seed ortholog is 99%.

Group of orthologs #217. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 T.annulata:313

A8I4P5              	100.00%		Q4U9P5              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for Q4U9P5 as seed ortholog is 100%.

Group of orthologs #218. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 T.annulata:313

A8I8V6              	100.00%		Q4UGD7              	100.00%
Bootstrap support for A8I8V6 as seed ortholog is 100%.
Bootstrap support for Q4UGD7 as seed ortholog is 100%.

Group of orthologs #219. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 T.annulata:312

A8IYU6              	100.00%		Q4UEG6              	100.00%
A8IYU5              	40.00%		
Bootstrap support for A8IYU6 as seed ortholog is 100%.
Bootstrap support for Q4UEG6 as seed ortholog is 100%.

Group of orthologs #220. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 T.annulata:311

A8IT31              	100.00%		Q4UF80              	100.00%
Bootstrap support for A8IT31 as seed ortholog is 100%.
Bootstrap support for Q4UF80 as seed ortholog is 100%.

Group of orthologs #221. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 T.annulata:310

A8HUE0              	100.00%		Q4UE34              	100.00%
Bootstrap support for A8HUE0 as seed ortholog is 100%.
Bootstrap support for Q4UE34 as seed ortholog is 100%.

Group of orthologs #222. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 T.annulata:310

A8IS72              	100.00%		Q4UEC8              	100.00%
Bootstrap support for A8IS72 as seed ortholog is 100%.
Bootstrap support for Q4UEC8 as seed ortholog is 100%.

Group of orthologs #223. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:309

Q42690              	100.00%		Q4UG57              	100.00%
A8JCY4              	10.66%		
Bootstrap support for Q42690 as seed ortholog is 99%.
Bootstrap support for Q4UG57 as seed ortholog is 100%.

Group of orthologs #224. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:309 T.annulata:309

A8IZK3              	100.00%		Q4UDF6              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for Q4UDF6 as seed ortholog is 100%.

Group of orthologs #225. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 T.annulata:308

A8IWF2              	100.00%		Q4UDL2              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 100%.
Bootstrap support for Q4UDL2 as seed ortholog is 100%.

Group of orthologs #226. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 T.annulata:307

A8HX04              	100.00%		Q4UGF6              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for Q4UGF6 as seed ortholog is 100%.

Group of orthologs #227. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 T.annulata:307

A8JHM2              	100.00%		Q4U8V4              	100.00%
Bootstrap support for A8JHM2 as seed ortholog is 100%.
Bootstrap support for Q4U8V4 as seed ortholog is 100%.

Group of orthologs #228. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 T.annulata:208

A8J1B6              	100.00%		Q4UDK1              	100.00%
Bootstrap support for A8J1B6 as seed ortholog is 99%.
Bootstrap support for Q4UDK1 as seed ortholog is 100%.

Group of orthologs #229. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:48

A8I6G3              	100.00%		Q4UAM8              	100.00%
Bootstrap support for A8I6G3 as seed ortholog is 98%.
Bootstrap support for Q4UAM8 as seed ortholog is 67%.
Alternative seed ortholog is Q4UCK0 (48 bits away from this cluster)

Group of orthologs #230. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:115

A8ICS4              	100.00%		Q4U8S0              	100.00%
Bootstrap support for A8ICS4 as seed ortholog is 99%.
Bootstrap support for Q4U8S0 as seed ortholog is 99%.

Group of orthologs #231. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 T.annulata:301

Q84X74              	100.00%		Q4UIU3              	100.00%
Bootstrap support for Q84X74 as seed ortholog is 100%.
Bootstrap support for Q4UIU3 as seed ortholog is 100%.

Group of orthologs #232. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 T.annulata:299

A8IET6              	100.00%		Q4UCZ7              	100.00%
Bootstrap support for A8IET6 as seed ortholog is 100%.
Bootstrap support for Q4UCZ7 as seed ortholog is 100%.

Group of orthologs #233. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 T.annulata:298

A8J633              	100.00%		Q4UC35              	100.00%
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for Q4UC35 as seed ortholog is 100%.

Group of orthologs #234. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 T.annulata:297

A8HP55              	100.00%		Q4UDE7              	100.00%
Bootstrap support for A8HP55 as seed ortholog is 100%.
Bootstrap support for Q4UDE7 as seed ortholog is 100%.

Group of orthologs #235. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 T.annulata:297

A8IBJ5              	100.00%		Q4UG25              	100.00%
Bootstrap support for A8IBJ5 as seed ortholog is 100%.
Bootstrap support for Q4UG25 as seed ortholog is 100%.

Group of orthologs #236. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 T.annulata:297

A8J2I5              	100.00%		Q4UAU2              	100.00%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for Q4UAU2 as seed ortholog is 100%.

Group of orthologs #237. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 T.annulata:297

A8JEW4              	100.00%		Q4UAZ2              	100.00%
Bootstrap support for A8JEW4 as seed ortholog is 100%.
Bootstrap support for Q4UAZ2 as seed ortholog is 100%.

Group of orthologs #238. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:296 T.annulata:296

A8HRF8              	100.00%		Q4UGH6              	100.00%
Bootstrap support for A8HRF8 as seed ortholog is 100%.
Bootstrap support for Q4UGH6 as seed ortholog is 100%.

Group of orthologs #239. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 T.annulata:294

A8J3F9              	100.00%		Q4UEZ4              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 100%.
Bootstrap support for Q4UEZ4 as seed ortholog is 100%.

Group of orthologs #240. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 T.annulata:293

A8I982              	100.00%		Q4UB33              	100.00%
Bootstrap support for A8I982 as seed ortholog is 100%.
Bootstrap support for Q4UB33 as seed ortholog is 100%.

Group of orthologs #241. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 T.annulata:214

A8IRX5              	100.00%		Q4UHU4              	100.00%
Bootstrap support for A8IRX5 as seed ortholog is 100%.
Bootstrap support for Q4UHU4 as seed ortholog is 100%.

Group of orthologs #242. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 T.annulata:193

A8JF17              	100.00%		Q4UHQ9              	100.00%
Bootstrap support for A8JF17 as seed ortholog is 99%.
Bootstrap support for Q4UHQ9 as seed ortholog is 100%.

Group of orthologs #243. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 T.annulata:289

A8IQ05              	100.00%		Q4UHL1              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for Q4UHL1 as seed ortholog is 100%.

Group of orthologs #244. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 T.annulata:109

A8IQC5              	100.00%		Q4UHP2              	100.00%
Bootstrap support for A8IQC5 as seed ortholog is 99%.
Bootstrap support for Q4UHP2 as seed ortholog is 99%.

Group of orthologs #245. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 T.annulata:71

A8J018              	100.00%		Q4U8R0              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for Q4U8R0 as seed ortholog is 94%.

Group of orthologs #246. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 T.annulata:286

A8JGV6              	100.00%		Q4UEW2              	100.00%
Q7X7A7              	19.56%		
Bootstrap support for A8JGV6 as seed ortholog is 100%.
Bootstrap support for Q4UEW2 as seed ortholog is 100%.

Group of orthologs #247. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 T.annulata:286

A8J9T2              	100.00%		Q4UCM8              	100.00%
Bootstrap support for A8J9T2 as seed ortholog is 100%.
Bootstrap support for Q4UCM8 as seed ortholog is 100%.

Group of orthologs #248. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 T.annulata:285

A8HU09              	100.00%		Q4UED6              	100.00%
Bootstrap support for A8HU09 as seed ortholog is 100%.
Bootstrap support for Q4UED6 as seed ortholog is 100%.

Group of orthologs #249. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 T.annulata:285

A8IGM2              	100.00%		Q4UIZ5              	100.00%
Bootstrap support for A8IGM2 as seed ortholog is 100%.
Bootstrap support for Q4UIZ5 as seed ortholog is 100%.

Group of orthologs #250. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 T.annulata:284

A8I0M0              	100.00%		Q4UET6              	100.00%
Bootstrap support for A8I0M0 as seed ortholog is 100%.
Bootstrap support for Q4UET6 as seed ortholog is 100%.

Group of orthologs #251. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:282

A8IAM9              	100.00%		Q4UCQ8              	100.00%
Bootstrap support for A8IAM9 as seed ortholog is 87%.
Bootstrap support for Q4UCQ8 as seed ortholog is 100%.

Group of orthologs #252. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 T.annulata:282

A8IN76              	100.00%		Q4UI09              	100.00%
Bootstrap support for A8IN76 as seed ortholog is 99%.
Bootstrap support for Q4UI09 as seed ortholog is 100%.

Group of orthologs #253. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 T.annulata:280

A8J5E0              	100.00%		Q4U9T3              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 100%.
Bootstrap support for Q4U9T3 as seed ortholog is 100%.

Group of orthologs #254. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 T.annulata:278

A8J3N8              	100.00%		Q4UA92              	100.00%
Bootstrap support for A8J3N8 as seed ortholog is 100%.
Bootstrap support for Q4UA92 as seed ortholog is 100%.

Group of orthologs #255. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 T.annulata:278

A8J0I0              	100.00%		Q4UES5              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for Q4UES5 as seed ortholog is 100%.

Group of orthologs #256. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 T.annulata:278

Q695H0              	100.00%		Q4UBS1              	100.00%
Bootstrap support for Q695H0 as seed ortholog is 90%.
Bootstrap support for Q4UBS1 as seed ortholog is 100%.

Group of orthologs #257. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 T.annulata:277

A8J7D9              	100.00%		Q4U8K0              	100.00%
Bootstrap support for A8J7D9 as seed ortholog is 100%.
Bootstrap support for Q4U8K0 as seed ortholog is 100%.

Group of orthologs #258. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 T.annulata:276

A8ICN2              	100.00%		Q4UGP1              	100.00%
A8HNN4              	53.02%		
A8HNN6              	51.40%		
Bootstrap support for A8ICN2 as seed ortholog is 99%.
Bootstrap support for Q4UGP1 as seed ortholog is 100%.

Group of orthologs #259. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 T.annulata:276

A8HY46              	100.00%		Q4UH16              	100.00%
Bootstrap support for A8HY46 as seed ortholog is 100%.
Bootstrap support for Q4UH16 as seed ortholog is 100%.

Group of orthologs #260. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 T.annulata:107

Q9FXT7              	100.00%		Q4UGU0              	100.00%
A8IKD6              	37.35%		
A8IKE3              	34.44%		
Bootstrap support for Q9FXT7 as seed ortholog is 99%.
Bootstrap support for Q4UGU0 as seed ortholog is 99%.

Group of orthologs #261. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 T.annulata:275

A8ID63              	100.00%		Q4U8M0              	100.00%
Bootstrap support for A8ID63 as seed ortholog is 100%.
Bootstrap support for Q4U8M0 as seed ortholog is 100%.

Group of orthologs #262. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 T.annulata:274

A8HMQ7              	100.00%		Q4U9I9              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for Q4U9I9 as seed ortholog is 100%.

Group of orthologs #263. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 T.annulata:274

A8J4I7              	100.00%		Q4UE66              	100.00%
Bootstrap support for A8J4I7 as seed ortholog is 100%.
Bootstrap support for Q4UE66 as seed ortholog is 100%.

Group of orthologs #264. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 T.annulata:272

A8I1A7              	100.00%		Q4UI67              	100.00%
Bootstrap support for A8I1A7 as seed ortholog is 100%.
Bootstrap support for Q4UI67 as seed ortholog is 100%.

Group of orthologs #265. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 T.annulata:272

A8J6M3              	100.00%		Q4UB92              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 100%.
Bootstrap support for Q4UB92 as seed ortholog is 100%.

Group of orthologs #266. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 T.annulata:142

A8IMW9              	100.00%		Q4UG17              	100.00%
Bootstrap support for A8IMW9 as seed ortholog is 99%.
Bootstrap support for Q4UG17 as seed ortholog is 99%.

Group of orthologs #267. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:271 T.annulata:271

A8J6K9              	100.00%		Q4UHB7              	100.00%
Bootstrap support for A8J6K9 as seed ortholog is 100%.
Bootstrap support for Q4UHB7 as seed ortholog is 100%.

Group of orthologs #268. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 T.annulata:219

A8IL29              	100.00%		Q4UDU9              	100.00%
Bootstrap support for A8IL29 as seed ortholog is 99%.
Bootstrap support for Q4UDU9 as seed ortholog is 100%.

Group of orthologs #269. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 T.annulata:267

A8J5Z0              	100.00%		Q4UGN6              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 100%.
Bootstrap support for Q4UGN6 as seed ortholog is 100%.

Group of orthologs #270. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 T.annulata:267

A8J5J3              	100.00%		Q4UIT8              	100.00%
Bootstrap support for A8J5J3 as seed ortholog is 100%.
Bootstrap support for Q4UIT8 as seed ortholog is 100%.

Group of orthologs #271. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 T.annulata:266

A8IWK3              	100.00%		Q4U9Y2              	100.00%
Bootstrap support for A8IWK3 as seed ortholog is 100%.
Bootstrap support for Q4U9Y2 as seed ortholog is 100%.

Group of orthologs #272. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 T.annulata:265

A8HQI6              	100.00%		Q4U8L9              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 100%.
Bootstrap support for Q4U8L9 as seed ortholog is 100%.

Group of orthologs #273. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 T.annulata:195

A8IRV6              	100.00%		Q4UA40              	100.00%
Bootstrap support for A8IRV6 as seed ortholog is 100%.
Bootstrap support for Q4UA40 as seed ortholog is 99%.

Group of orthologs #274. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 T.annulata:263

A8J8V5              	100.00%		Q4UA69              	100.00%
Bootstrap support for A8J8V5 as seed ortholog is 100%.
Bootstrap support for Q4UA69 as seed ortholog is 100%.

Group of orthologs #275. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 T.annulata:263

A8JBB2              	100.00%		Q4UA76              	100.00%
Bootstrap support for A8JBB2 as seed ortholog is 100%.
Bootstrap support for Q4UA76 as seed ortholog is 100%.

Group of orthologs #276. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 T.annulata:262

A8HNF4              	100.00%		Q4UEL5              	100.00%
Bootstrap support for A8HNF4 as seed ortholog is 100%.
Bootstrap support for Q4UEL5 as seed ortholog is 100%.

Group of orthologs #277. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 T.annulata:262

A8IDY0              	100.00%		Q4U9N0              	100.00%
Bootstrap support for A8IDY0 as seed ortholog is 100%.
Bootstrap support for Q4U9N0 as seed ortholog is 100%.

Group of orthologs #278. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 T.annulata:217

A8J3F7              	100.00%		Q4UEF6              	100.00%
Bootstrap support for A8J3F7 as seed ortholog is 99%.
Bootstrap support for Q4UEF6 as seed ortholog is 100%.

Group of orthologs #279. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 T.annulata:262

A8J825              	100.00%		Q4UFH6              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for Q4UFH6 as seed ortholog is 100%.

Group of orthologs #280. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 T.annulata:261

A8JCY9              	100.00%		Q4U8T4              	100.00%
Bootstrap support for A8JCY9 as seed ortholog is 100%.
Bootstrap support for Q4U8T4 as seed ortholog is 100%.

Group of orthologs #281. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 T.annulata:261

A8JGF8              	100.00%		Q4U9Z6              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 100%.
Bootstrap support for Q4U9Z6 as seed ortholog is 100%.

Group of orthologs #282. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 T.annulata:35

A8JB50              	100.00%		Q4UE84              	100.00%
Bootstrap support for A8JB50 as seed ortholog is 91%.
Bootstrap support for Q4UE84 as seed ortholog is 86%.

Group of orthologs #283. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 T.annulata:81

A8JDY3              	100.00%		Q4UE05              	100.00%
Bootstrap support for A8JDY3 as seed ortholog is 100%.
Bootstrap support for Q4UE05 as seed ortholog is 97%.

Group of orthologs #284. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 T.annulata:84

A8IX13              	100.00%		Q4UH40              	100.00%
Bootstrap support for A8IX13 as seed ortholog is 100%.
Bootstrap support for Q4UH40 as seed ortholog is 95%.

Group of orthologs #285. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 T.annulata:258

A8JBN5              	100.00%		Q4UDM3              	100.00%
Bootstrap support for A8JBN5 as seed ortholog is 100%.
Bootstrap support for Q4UDM3 as seed ortholog is 100%.

Group of orthologs #286. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 T.annulata:257

A8HQ81              	100.00%		Q4UGT4              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 100%.
Bootstrap support for Q4UGT4 as seed ortholog is 100%.

Group of orthologs #287. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 T.annulata:257

A8J567              	100.00%		Q4UDE8              	100.00%
Bootstrap support for A8J567 as seed ortholog is 100%.
Bootstrap support for Q4UDE8 as seed ortholog is 100%.

Group of orthologs #288. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 T.annulata:256

A8IC90              	100.00%		Q4UEV0              	100.00%
Bootstrap support for A8IC90 as seed ortholog is 100%.
Bootstrap support for Q4UEV0 as seed ortholog is 100%.

Group of orthologs #289. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:256

A8J1B4              	100.00%		Q4UF42              	100.00%
Bootstrap support for A8J1B4 as seed ortholog is 99%.
Bootstrap support for Q4UF42 as seed ortholog is 100%.

Group of orthologs #290. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:132

A8J195              	100.00%		Q4UI69              	100.00%
Bootstrap support for A8J195 as seed ortholog is 100%.
Bootstrap support for Q4UI69 as seed ortholog is 100%.

Group of orthologs #291. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 T.annulata:255

A8I0A0              	100.00%		Q4UG02              	100.00%
Bootstrap support for A8I0A0 as seed ortholog is 100%.
Bootstrap support for Q4UG02 as seed ortholog is 100%.

Group of orthologs #292. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 T.annulata:254

A8HTE5              	100.00%		Q4UB62              	100.00%
Bootstrap support for A8HTE5 as seed ortholog is 100%.
Bootstrap support for Q4UB62 as seed ortholog is 100%.

Group of orthologs #293. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 T.annulata:178

A8HY75              	100.00%		Q4UAE6              	100.00%
Bootstrap support for A8HY75 as seed ortholog is 99%.
Bootstrap support for Q4UAE6 as seed ortholog is 100%.

Group of orthologs #294. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 T.annulata:254

A8JF71              	100.00%		Q4UFD2              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for Q4UFD2 as seed ortholog is 100%.

Group of orthologs #295. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 T.annulata:253

A8HQU3              	100.00%		Q4UG32              	100.00%
Bootstrap support for A8HQU3 as seed ortholog is 100%.
Bootstrap support for Q4UG32 as seed ortholog is 100%.

Group of orthologs #296. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 T.annulata:253

A8ILL5              	100.00%		Q4UI42              	100.00%
Bootstrap support for A8ILL5 as seed ortholog is 100%.
Bootstrap support for Q4UI42 as seed ortholog is 100%.

Group of orthologs #297. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 T.annulata:253

A8J5F7              	100.00%		Q4UGE1              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for Q4UGE1 as seed ortholog is 100%.

Group of orthologs #298. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 T.annulata:252

A8HQF0              	100.00%		Q4UHY4              	100.00%
Bootstrap support for A8HQF0 as seed ortholog is 100%.
Bootstrap support for Q4UHY4 as seed ortholog is 100%.

Group of orthologs #299. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 T.annulata:252

A8IAX2              	100.00%		Q4UG00              	100.00%
Bootstrap support for A8IAX2 as seed ortholog is 100%.
Bootstrap support for Q4UG00 as seed ortholog is 100%.

Group of orthologs #300. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 T.annulata:196

A8J2Z9              	100.00%		Q4UFP0              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 100%.
Bootstrap support for Q4UFP0 as seed ortholog is 100%.

Group of orthologs #301. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 T.annulata:251

A8HSA7              	100.00%		Q4UCS5              	100.00%
A8J9M0              	92.31%		Q4U9Y6              	33.33%
A8IK09              	84.62%		
A8HWY2              	69.23%		
Bootstrap support for A8HSA7 as seed ortholog is 99%.
Bootstrap support for Q4UCS5 as seed ortholog is 100%.

Group of orthologs #302. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 T.annulata:251

A8HWK6              	100.00%		Q4UIU4              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 100%.
Bootstrap support for Q4UIU4 as seed ortholog is 100%.

Group of orthologs #303. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 T.annulata:250

A8IE86              	100.00%		Q4UCR3              	100.00%
A8HRK2              	18.98%		
Bootstrap support for A8IE86 as seed ortholog is 100%.
Bootstrap support for Q4UCR3 as seed ortholog is 100%.

Group of orthologs #304. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 T.annulata:250

A8IB25              	100.00%		Q4U8U5              	100.00%
Bootstrap support for A8IB25 as seed ortholog is 100%.
Bootstrap support for Q4U8U5 as seed ortholog is 100%.

Group of orthologs #305. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 T.annulata:250

A8ID74              	100.00%		Q4UBJ6              	100.00%
Bootstrap support for A8ID74 as seed ortholog is 100%.
Bootstrap support for Q4UBJ6 as seed ortholog is 100%.

Group of orthologs #306. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 T.annulata:170

A8IZ65              	100.00%		Q4UGA0              	100.00%
Bootstrap support for A8IZ65 as seed ortholog is 97%.
Bootstrap support for Q4UGA0 as seed ortholog is 100%.

Group of orthologs #307. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 T.annulata:249

A8J9B2              	100.00%		Q4UG63              	100.00%
Bootstrap support for A8J9B2 as seed ortholog is 100%.
Bootstrap support for Q4UG63 as seed ortholog is 100%.

Group of orthologs #308. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 T.annulata:248

A8J0U0              	100.00%		Q4UEK6              	100.00%
A8J0U1              	100.00%		
A8J399              	100.00%		
A8J0U2              	70.26%		
A8J0U4              	69.25%		
A8J993              	68.35%		
A8ILT7              	48.16%		
A8JH07              	22.04%		
Q8LP67              	21.94%		
A8JJL0              	13.57%		
A8ILI7              	11.02%		
Bootstrap support for A8J0U0 as seed ortholog is 100%.
Bootstrap support for A8J0U1 as seed ortholog is 100%.
Bootstrap support for A8J399 as seed ortholog is 100%.
Bootstrap support for Q4UEK6 as seed ortholog is 100%.

Group of orthologs #309. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 T.annulata:198

A8JAW4              	100.00%		Q4UGU5              	100.00%
Bootstrap support for A8JAW4 as seed ortholog is 100%.
Bootstrap support for Q4UGU5 as seed ortholog is 100%.

Group of orthologs #310. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 T.annulata:156

A8ILX2              	100.00%		Q4UBB3              	100.00%
Bootstrap support for A8ILX2 as seed ortholog is 100%.
Bootstrap support for Q4UBB3 as seed ortholog is 100%.

Group of orthologs #311. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:134

A8IDP6              	100.00%		Q4UF72              	100.00%
Bootstrap support for A8IDP6 as seed ortholog is 99%.
Bootstrap support for Q4UF72 as seed ortholog is 100%.

Group of orthologs #312. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:110

A8JBJ3              	100.00%		Q4UBZ3              	100.00%
Bootstrap support for A8JBJ3 as seed ortholog is 99%.
Bootstrap support for Q4UBZ3 as seed ortholog is 100%.

Group of orthologs #313. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 T.annulata:246

A8HYQ9              	100.00%		Q4UCE4              	100.00%
Bootstrap support for A8HYQ9 as seed ortholog is 100%.
Bootstrap support for Q4UCE4 as seed ortholog is 100%.

Group of orthologs #314. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 T.annulata:245

A8HY93              	100.00%		Q4UE79              	100.00%
Bootstrap support for A8HY93 as seed ortholog is 100%.
Bootstrap support for Q4UE79 as seed ortholog is 100%.

Group of orthologs #315. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 T.annulata:245

A8IYT7              	100.00%		Q4U8X2              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for Q4U8X2 as seed ortholog is 100%.

Group of orthologs #316. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 T.annulata:243

A8J4X1              	100.00%		Q4U8R2              	100.00%
Bootstrap support for A8J4X1 as seed ortholog is 100%.
Bootstrap support for Q4U8R2 as seed ortholog is 100%.

Group of orthologs #317. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 T.annulata:162

A8JAG5              	100.00%		Q4UEP5              	100.00%
Bootstrap support for A8JAG5 as seed ortholog is 100%.
Bootstrap support for Q4UEP5 as seed ortholog is 99%.

Group of orthologs #318. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 T.annulata:240

A8HYL2              	100.00%		Q4UIH2              	100.00%
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for Q4UIH2 as seed ortholog is 100%.

Group of orthologs #319. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 T.annulata:240

A8IN95              	100.00%		Q4UFQ8              	100.00%
Bootstrap support for A8IN95 as seed ortholog is 100%.
Bootstrap support for Q4UFQ8 as seed ortholog is 100%.

Group of orthologs #320. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 T.annulata:171

A8JD37              	100.00%		Q4UA22              	100.00%
Bootstrap support for A8JD37 as seed ortholog is 99%.
Bootstrap support for Q4UA22 as seed ortholog is 99%.

Group of orthologs #321. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 T.annulata:240

A8JGD2              	100.00%		Q4UBP2              	100.00%
Bootstrap support for A8JGD2 as seed ortholog is 100%.
Bootstrap support for Q4UBP2 as seed ortholog is 100%.

Group of orthologs #322. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:167

A8J5W3              	100.00%		Q4UA55              	100.00%
Bootstrap support for A8J5W3 as seed ortholog is 99%.
Bootstrap support for Q4UA55 as seed ortholog is 99%.

Group of orthologs #323. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 T.annulata:239

A8J1G8              	100.00%		Q4UEJ3              	100.00%
Bootstrap support for A8J1G8 as seed ortholog is 100%.
Bootstrap support for Q4UEJ3 as seed ortholog is 100%.

Group of orthologs #324. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 T.annulata:238

A8HNM2              	100.00%		Q4UHN1              	100.00%
                    	       		Q4UHM6              	62.87%
Bootstrap support for A8HNM2 as seed ortholog is 100%.
Bootstrap support for Q4UHN1 as seed ortholog is 100%.

Group of orthologs #325. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 T.annulata:86

A8IAJ1              	100.00%		Q4UC87              	100.00%
Bootstrap support for A8IAJ1 as seed ortholog is 98%.
Bootstrap support for Q4UC87 as seed ortholog is 97%.

Group of orthologs #326. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 T.annulata:86

A8JD64              	100.00%		Q4UGI5              	100.00%
A8J282              	16.41%		
Bootstrap support for A8JD64 as seed ortholog is 85%.
Bootstrap support for Q4UGI5 as seed ortholog is 99%.

Group of orthologs #327. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 T.annulata:236

A8HVQ1              	100.00%		Q4UFS9              	100.00%
Bootstrap support for A8HVQ1 as seed ortholog is 100%.
Bootstrap support for Q4UFS9 as seed ortholog is 100%.

Group of orthologs #328. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 T.annulata:235

A8HYG6              	100.00%		Q4UEZ1              	100.00%
Bootstrap support for A8HYG6 as seed ortholog is 100%.
Bootstrap support for Q4UEZ1 as seed ortholog is 100%.

Group of orthologs #329. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 T.annulata:235

A8I9S6              	100.00%		Q4UCL6              	100.00%
Bootstrap support for A8I9S6 as seed ortholog is 99%.
Bootstrap support for Q4UCL6 as seed ortholog is 100%.

Group of orthologs #330. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 T.annulata:235

A8J768              	100.00%		Q4UA32              	100.00%
Bootstrap support for A8J768 as seed ortholog is 100%.
Bootstrap support for Q4UA32 as seed ortholog is 100%.

Group of orthologs #331. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 T.annulata:234

A8ICB3              	100.00%		Q4UIA0              	100.00%
Bootstrap support for A8ICB3 as seed ortholog is 100%.
Bootstrap support for Q4UIA0 as seed ortholog is 100%.

Group of orthologs #332. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 T.annulata:106

A8J9W4              	100.00%		Q4U8M8              	100.00%
Bootstrap support for A8J9W4 as seed ortholog is 90%.
Bootstrap support for Q4U8M8 as seed ortholog is 99%.

Group of orthologs #333. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 T.annulata:84

A8ICW2              	100.00%		Q4UEY1              	100.00%
A8HPT5              	5.69%		
Bootstrap support for A8ICW2 as seed ortholog is 73%.
Alternative seed ortholog is A8IKR9 (40 bits away from this cluster)
Bootstrap support for Q4UEY1 as seed ortholog is 99%.

Group of orthologs #334. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 T.annulata:230

A8J129              	100.00%		Q4UDB3              	100.00%
A8I263              	32.45%		
A8HXW8              	13.82%		
Bootstrap support for A8J129 as seed ortholog is 100%.
Bootstrap support for Q4UDB3 as seed ortholog is 100%.

Group of orthologs #335. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 T.annulata:133

A8JCG2              	100.00%		Q4U8H4              	100.00%
A8JD18              	15.36%		
Bootstrap support for A8JCG2 as seed ortholog is 91%.
Bootstrap support for Q4U8H4 as seed ortholog is 99%.

Group of orthologs #336. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 T.annulata:229

A8HNG4              	100.00%		Q4U8M3              	100.00%
Bootstrap support for A8HNG4 as seed ortholog is 100%.
Bootstrap support for Q4U8M3 as seed ortholog is 100%.

Group of orthologs #337. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 T.annulata:229

A8JCW5              	100.00%		Q4U9B7              	100.00%
Bootstrap support for A8JCW5 as seed ortholog is 100%.
Bootstrap support for Q4U9B7 as seed ortholog is 100%.

Group of orthologs #338. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 T.annulata:123

Q5S7Y5              	100.00%		Q4U9J9              	100.00%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for Q4U9J9 as seed ortholog is 99%.

Group of orthologs #339. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 T.annulata:148

A8JCX9              	100.00%		Q4UIR4              	100.00%
Bootstrap support for A8JCX9 as seed ortholog is 100%.
Bootstrap support for Q4UIR4 as seed ortholog is 100%.

Group of orthologs #340. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 T.annulata:226

A8J200              	100.00%		Q4UD92              	100.00%
Bootstrap support for A8J200 as seed ortholog is 75%.
Bootstrap support for Q4UD92 as seed ortholog is 100%.

Group of orthologs #341. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 T.annulata:120

A8HXK0              	100.00%		Q4UDS7              	100.00%
Bootstrap support for A8HXK0 as seed ortholog is 100%.
Bootstrap support for Q4UDS7 as seed ortholog is 99%.

Group of orthologs #342. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 T.annulata:225

A8I7W6              	100.00%		Q4UIK6              	100.00%
Bootstrap support for A8I7W6 as seed ortholog is 100%.
Bootstrap support for Q4UIK6 as seed ortholog is 100%.

Group of orthologs #343. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 T.annulata:137

A8HNP3              	100.00%		Q4UBT1              	100.00%
Bootstrap support for A8HNP3 as seed ortholog is 100%.
Bootstrap support for Q4UBT1 as seed ortholog is 99%.

Group of orthologs #344. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 T.annulata:224

A8JDN9              	100.00%		Q4UC14              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 100%.
Bootstrap support for Q4UC14 as seed ortholog is 100%.

Group of orthologs #345. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 T.annulata:223

A8J3T9              	100.00%		Q4UEW8              	100.00%
Bootstrap support for A8J3T9 as seed ortholog is 100%.
Bootstrap support for Q4UEW8 as seed ortholog is 100%.

Group of orthologs #346. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 T.annulata:223

Q84JV7              	100.00%		Q4UAB0              	100.00%
Bootstrap support for Q84JV7 as seed ortholog is 100%.
Bootstrap support for Q4UAB0 as seed ortholog is 100%.

Group of orthologs #347. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:93

A8JHQ7              	100.00%		Q4UB16              	100.00%
A8JHI5              	7.07%		
Bootstrap support for A8JHQ7 as seed ortholog is 99%.
Bootstrap support for Q4UB16 as seed ortholog is 100%.

Group of orthologs #348. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:221 T.annulata:221

A8I7S0              	100.00%		Q4UGQ2              	100.00%
Bootstrap support for A8I7S0 as seed ortholog is 100%.
Bootstrap support for Q4UGQ2 as seed ortholog is 100%.

Group of orthologs #349. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 T.annulata:220

A8HWI6              	100.00%		Q4U969              	100.00%
Bootstrap support for A8HWI6 as seed ortholog is 100%.
Bootstrap support for Q4U969 as seed ortholog is 100%.

Group of orthologs #350. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 T.annulata:220

A8IJQ4              	100.00%		Q4UB42              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for Q4UB42 as seed ortholog is 100%.

Group of orthologs #351. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 T.annulata:220

A8ICL5              	100.00%		Q4UEM9              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 100%.
Bootstrap support for Q4UEM9 as seed ortholog is 100%.

Group of orthologs #352. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 T.annulata:220

A8JEP9              	100.00%		Q4UHM1              	100.00%
Bootstrap support for A8JEP9 as seed ortholog is 100%.
Bootstrap support for Q4UHM1 as seed ortholog is 100%.

Group of orthologs #353. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 T.annulata:219

A8IJK3              	100.00%		Q4UCH1              	100.00%
Bootstrap support for A8IJK3 as seed ortholog is 100%.
Bootstrap support for Q4UCH1 as seed ortholog is 100%.

Group of orthologs #354. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 T.annulata:219

A8IP78              	100.00%		Q4UCY7              	100.00%
Bootstrap support for A8IP78 as seed ortholog is 100%.
Bootstrap support for Q4UCY7 as seed ortholog is 100%.

Group of orthologs #355. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 T.annulata:218

A8IW55              	100.00%		Q4U8E0              	100.00%
A8I268              	27.14%		Q4UE92              	30.86%
A8I4J0              	12.97%		Q4UE95              	30.42%
                    	       		Q4UD84              	30.17%
                    	       		Q4UAT8              	30.01%
                    	       		Q4UAT9              	29.98%
                    	       		Q4UAR4              	29.76%
                    	       		Q4UAR5              	29.69%
                    	       		Q4UE94              	29.63%
                    	       		Q4UAR3              	29.63%
                    	       		Q4UD68              	29.47%
                    	       		Q4UFX8              	29.38%
                    	       		Q4UHH5              	29.32%
                    	       		Q4UD49              	29.28%
                    	       		Q4UD47              	29.28%
                    	       		Q4UFT2              	28.75%
                    	       		Q4UFS2              	27.36%
Bootstrap support for A8IW55 as seed ortholog is 100%.
Bootstrap support for Q4U8E0 as seed ortholog is 100%.

Group of orthologs #356. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 T.annulata:218

A8J7D8              	100.00%		Q4UA58              	100.00%
Bootstrap support for A8J7D8 as seed ortholog is 100%.
Bootstrap support for Q4UA58 as seed ortholog is 100%.

Group of orthologs #357. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 T.annulata:123

A8J4N7              	100.00%		Q4UFJ8              	100.00%
Bootstrap support for A8J4N7 as seed ortholog is 89%.
Bootstrap support for Q4UFJ8 as seed ortholog is 99%.

Group of orthologs #358. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 T.annulata:218

A8J3U8              	100.00%		Q4UIQ4              	100.00%
Bootstrap support for A8J3U8 as seed ortholog is 100%.
Bootstrap support for Q4UIQ4 as seed ortholog is 100%.

Group of orthologs #359. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 T.annulata:218

A8J5T5              	100.00%		Q4UIB1              	100.00%
Bootstrap support for A8J5T5 as seed ortholog is 100%.
Bootstrap support for Q4UIB1 as seed ortholog is 100%.

Group of orthologs #360. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 T.annulata:218

A8JBB8              	100.00%		Q4UHL4              	100.00%
Bootstrap support for A8JBB8 as seed ortholog is 100%.
Bootstrap support for Q4UHL4 as seed ortholog is 100%.

Group of orthologs #361. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 T.annulata:217

A8HTX4              	100.00%		Q4UGI9              	100.00%
Bootstrap support for A8HTX4 as seed ortholog is 100%.
Bootstrap support for Q4UGI9 as seed ortholog is 100%.

Group of orthologs #362. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 T.annulata:217

A8IWL4              	100.00%		Q4UIT4              	100.00%
Bootstrap support for A8IWL4 as seed ortholog is 99%.
Bootstrap support for Q4UIT4 as seed ortholog is 100%.

Group of orthologs #363. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 T.annulata:216

A8HMQ1              	100.00%		Q4UIP2              	100.00%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for Q4UIP2 as seed ortholog is 100%.

Group of orthologs #364. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 T.annulata:216

A8IGY1              	100.00%		Q4UH48              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for Q4UH48 as seed ortholog is 100%.

Group of orthologs #365. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 T.annulata:160

A8IDH5              	100.00%		Q4UG36              	100.00%
Bootstrap support for A8IDH5 as seed ortholog is 100%.
Bootstrap support for Q4UG36 as seed ortholog is 99%.

Group of orthologs #366. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 T.annulata:214

A8HVA6              	100.00%		Q4U9M7              	100.00%
Bootstrap support for A8HVA6 as seed ortholog is 100%.
Bootstrap support for Q4U9M7 as seed ortholog is 100%.

Group of orthologs #367. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 T.annulata:214

A8IJG8              	100.00%		Q4UBH5              	100.00%
Bootstrap support for A8IJG8 as seed ortholog is 100%.
Bootstrap support for Q4UBH5 as seed ortholog is 100%.

Group of orthologs #368. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:213

A8JC30              	100.00%		Q4U9D4              	100.00%
Bootstrap support for A8JC30 as seed ortholog is 99%.
Bootstrap support for Q4U9D4 as seed ortholog is 100%.

Group of orthologs #369. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 T.annulata:132

A8IVE2              	100.00%		Q4UB43              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for Q4UB43 as seed ortholog is 100%.

Group of orthologs #370. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 T.annulata:108

A8J0P9              	100.00%		Q4UBP1              	100.00%
Bootstrap support for A8J0P9 as seed ortholog is 99%.
Bootstrap support for Q4UBP1 as seed ortholog is 99%.

Group of orthologs #371. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 T.annulata:89

Q66YD3              	100.00%		Q4UDF9              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 94%.
Bootstrap support for Q4UDF9 as seed ortholog is 97%.

Group of orthologs #372. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 T.annulata:49

A8I2V3              	100.00%		Q4UAP7              	100.00%
A8JIT5              	18.52%		
Q9FE86              	16.40%		
Bootstrap support for A8I2V3 as seed ortholog is 100%.
Bootstrap support for Q4UAP7 as seed ortholog is 97%.

Group of orthologs #373. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 T.annulata:157

A8IL38              	100.00%		Q4U9T7              	100.00%
Bootstrap support for A8IL38 as seed ortholog is 100%.
Bootstrap support for Q4U9T7 as seed ortholog is 99%.

Group of orthologs #374. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 T.annulata:211

A8I9J2              	100.00%		Q4UIB4              	100.00%
Bootstrap support for A8I9J2 as seed ortholog is 93%.
Bootstrap support for Q4UIB4 as seed ortholog is 100%.

Group of orthologs #375. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 T.annulata:91

A8HN42              	100.00%		Q4UFD3              	100.00%
Bootstrap support for A8HN42 as seed ortholog is 99%.
Bootstrap support for Q4UFD3 as seed ortholog is 99%.

Group of orthologs #376. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 T.annulata:210

A8IAK9              	100.00%		Q4UH27              	100.00%
Bootstrap support for A8IAK9 as seed ortholog is 99%.
Bootstrap support for Q4UH27 as seed ortholog is 100%.

Group of orthologs #377. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 T.annulata:210

A8J073              	100.00%		Q4UA81              	100.00%
Bootstrap support for A8J073 as seed ortholog is 100%.
Bootstrap support for Q4UA81 as seed ortholog is 100%.

Group of orthologs #378. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 T.annulata:210

Q8HTL2              	100.00%		Q4UCG9              	100.00%
Bootstrap support for Q8HTL2 as seed ortholog is 56%.
Alternative seed ortholog is A8IU28 (6 bits away from this cluster)
Bootstrap support for Q4UCG9 as seed ortholog is 100%.

Group of orthologs #379. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 T.annulata:209

A8HVP2              	100.00%		Q4UGT3              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 100%.
Bootstrap support for Q4UGT3 as seed ortholog is 100%.

Group of orthologs #380. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 T.annulata:208

A8IA18              	100.00%		Q4UCR5              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for Q4UCR5 as seed ortholog is 100%.

Group of orthologs #381. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 T.annulata:159

A8J9W0              	100.00%		Q4UE25              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 100%.
Bootstrap support for Q4UE25 as seed ortholog is 100%.

Group of orthologs #382. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 T.annulata:208

A8JIU5              	100.00%		Q4U9S9              	100.00%
Bootstrap support for A8JIU5 as seed ortholog is 100%.
Bootstrap support for Q4U9S9 as seed ortholog is 100%.

Group of orthologs #383. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 T.annulata:9

A8HQ72              	100.00%		Q4U9Z3              	100.00%
Bootstrap support for A8HQ72 as seed ortholog is 95%.
Bootstrap support for Q4U9Z3 as seed ortholog is 73%.
Alternative seed ortholog is Q4UI58 (9 bits away from this cluster)

Group of orthologs #384. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 T.annulata:207

A8I665              	100.00%		Q4UGV7              	100.00%
Bootstrap support for A8I665 as seed ortholog is 99%.
Bootstrap support for Q4UGV7 as seed ortholog is 100%.

Group of orthologs #385. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 T.annulata:66

A8IRR7              	100.00%		Q4UI11              	100.00%
Bootstrap support for A8IRR7 as seed ortholog is 75%.
Bootstrap support for Q4UI11 as seed ortholog is 87%.

Group of orthologs #386. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 T.annulata:207

A8J8C2              	100.00%		Q4U8G8              	100.00%
Bootstrap support for A8J8C2 as seed ortholog is 92%.
Bootstrap support for Q4U8G8 as seed ortholog is 100%.

Group of orthologs #387. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:69

A8IVQ7              	100.00%		Q4UIU6              	100.00%
Bootstrap support for A8IVQ7 as seed ortholog is 98%.
Bootstrap support for Q4UIU6 as seed ortholog is 99%.

Group of orthologs #388. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 T.annulata:206

A8I5X1              	100.00%		Q4UFH5              	100.00%
Bootstrap support for A8I5X1 as seed ortholog is 100%.
Bootstrap support for Q4UFH5 as seed ortholog is 100%.

Group of orthologs #389. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:205

A8I8J2              	100.00%		Q4UF43              	100.00%
Bootstrap support for A8I8J2 as seed ortholog is 99%.
Bootstrap support for Q4UF43 as seed ortholog is 100%.

Group of orthologs #390. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:46

A8IRT2              	100.00%		Q4UJ50              	100.00%
Bootstrap support for A8IRT2 as seed ortholog is 99%.
Bootstrap support for Q4UJ50 as seed ortholog is 93%.

Group of orthologs #391. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 T.annulata:84

A8J8J8              	100.00%		Q4UBS9              	100.00%
Bootstrap support for A8J8J8 as seed ortholog is 98%.
Bootstrap support for Q4UBS9 as seed ortholog is 96%.

Group of orthologs #392. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 T.annulata:203

A8HX21              	100.00%		Q4U8X5              	100.00%
Bootstrap support for A8HX21 as seed ortholog is 67%.
Alternative seed ortholog is A8I9D7 (27 bits away from this cluster)
Bootstrap support for Q4U8X5 as seed ortholog is 100%.

Group of orthologs #393. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 T.annulata:203

A8IAK4              	100.00%		Q4UDM1              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 100%.
Bootstrap support for Q4UDM1 as seed ortholog is 100%.

Group of orthologs #394. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:203

A8IUL5              	100.00%		Q4UGM1              	100.00%
Bootstrap support for A8IUL5 as seed ortholog is 98%.
Bootstrap support for Q4UGM1 as seed ortholog is 100%.

Group of orthologs #395. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 T.annulata:203

A8IYG7              	100.00%		Q4UI79              	100.00%
Bootstrap support for A8IYG7 as seed ortholog is 100%.
Bootstrap support for Q4UI79 as seed ortholog is 100%.

Group of orthologs #396. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 T.annulata:203

A8JAS9              	100.00%		Q4U9E9              	100.00%
Bootstrap support for A8JAS9 as seed ortholog is 100%.
Bootstrap support for Q4U9E9 as seed ortholog is 100%.

Group of orthologs #397. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 T.annulata:202

A8I4H4              	100.00%		Q4UFV8              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for Q4UFV8 as seed ortholog is 100%.

Group of orthologs #398. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 T.annulata:202

A8I2G3              	100.00%		Q4UI17              	100.00%
Bootstrap support for A8I2G3 as seed ortholog is 100%.
Bootstrap support for Q4UI17 as seed ortholog is 100%.

Group of orthologs #399. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 T.annulata:202

A8IY85              	100.00%		Q4UDD7              	100.00%
Bootstrap support for A8IY85 as seed ortholog is 100%.
Bootstrap support for Q4UDD7 as seed ortholog is 100%.

Group of orthologs #400. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 T.annulata:202

A8J8Y2              	100.00%		Q4UHD1              	100.00%
Bootstrap support for A8J8Y2 as seed ortholog is 100%.
Bootstrap support for Q4UHD1 as seed ortholog is 100%.

Group of orthologs #401. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 T.annulata:201

A8IF80              	100.00%		Q4U8Z5              	100.00%
Bootstrap support for A8IF80 as seed ortholog is 100%.
Bootstrap support for Q4U8Z5 as seed ortholog is 100%.

Group of orthologs #402. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 T.annulata:201

A8I2T0              	100.00%		Q4UE19              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for Q4UE19 as seed ortholog is 100%.

Group of orthologs #403. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 T.annulata:201

A8I629              	100.00%		Q4UHR6              	100.00%
Bootstrap support for A8I629 as seed ortholog is 100%.
Bootstrap support for Q4UHR6 as seed ortholog is 100%.

Group of orthologs #404. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 T.annulata:201

A8JCR0              	100.00%		Q4UHH2              	100.00%
Bootstrap support for A8JCR0 as seed ortholog is 100%.
Bootstrap support for Q4UHH2 as seed ortholog is 100%.

Group of orthologs #405. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 T.annulata:200

A8I843              	100.00%		Q4UBJ2              	100.00%
Bootstrap support for A8I843 as seed ortholog is 100%.
Bootstrap support for Q4UBJ2 as seed ortholog is 100%.

Group of orthologs #406. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 T.annulata:200

A8JDZ8              	100.00%		Q4UDM9              	100.00%
Bootstrap support for A8JDZ8 as seed ortholog is 100%.
Bootstrap support for Q4UDM9 as seed ortholog is 100%.

Group of orthologs #407. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 T.annulata:104

A8I427              	100.00%		Q4UC89              	100.00%
Bootstrap support for A8I427 as seed ortholog is 98%.
Bootstrap support for Q4UC89 as seed ortholog is 99%.

Group of orthologs #408. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 T.annulata:199

A8IKZ2              	100.00%		Q4UFD5              	100.00%
Bootstrap support for A8IKZ2 as seed ortholog is 100%.
Bootstrap support for Q4UFD5 as seed ortholog is 100%.

Group of orthologs #409. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 T.annulata:199

A8JE07              	100.00%		Q4UDC9              	100.00%
Bootstrap support for A8JE07 as seed ortholog is 100%.
Bootstrap support for Q4UDC9 as seed ortholog is 100%.

Group of orthologs #410. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 T.annulata:198

A8HXZ5              	100.00%		Q4U9Y9              	100.00%
Bootstrap support for A8HXZ5 as seed ortholog is 100%.
Bootstrap support for Q4U9Y9 as seed ortholog is 100%.

Group of orthologs #411. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 T.annulata:198

A8I4T2              	100.00%		Q4UAH1              	100.00%
Bootstrap support for A8I4T2 as seed ortholog is 100%.
Bootstrap support for Q4UAH1 as seed ortholog is 100%.

Group of orthologs #412. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 T.annulata:198

A8IL60              	100.00%		Q4UGK9              	100.00%
Bootstrap support for A8IL60 as seed ortholog is 99%.
Bootstrap support for Q4UGK9 as seed ortholog is 100%.

Group of orthologs #413. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 T.annulata:198

A8J9V0              	100.00%		Q4UCI2              	100.00%
Bootstrap support for A8J9V0 as seed ortholog is 100%.
Bootstrap support for Q4UCI2 as seed ortholog is 100%.

Group of orthologs #414. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 T.annulata:96

O48949              	100.00%		Q4UC22              	100.00%
Bootstrap support for O48949 as seed ortholog is 100%.
Bootstrap support for Q4UC22 as seed ortholog is 97%.

Group of orthologs #415. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 T.annulata:197

A8JCT4              	100.00%		Q4UA66              	100.00%
Bootstrap support for A8JCT4 as seed ortholog is 100%.
Bootstrap support for Q4UA66 as seed ortholog is 100%.

Group of orthologs #416. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 T.annulata:196

A8HVA3              	100.00%		Q4U907              	100.00%
A8HSB0              	90.00%		
A8JJH1              	10.00%		
Bootstrap support for A8HVA3 as seed ortholog is 64%.
Alternative seed ortholog is A8J9L9 (6 bits away from this cluster)
Bootstrap support for Q4U907 as seed ortholog is 100%.

Group of orthologs #417. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 T.annulata:196

A8J5W8              	100.00%		Q4UBG2              	100.00%
Bootstrap support for A8J5W8 as seed ortholog is 100%.
Bootstrap support for Q4UBG2 as seed ortholog is 100%.

Group of orthologs #418. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 T.annulata:196

A8JDP4              	100.00%		Q4UGY5              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for Q4UGY5 as seed ortholog is 100%.

Group of orthologs #419. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:195

A8HRZ9              	100.00%		Q4UEX0              	100.00%
Bootstrap support for A8HRZ9 as seed ortholog is 100%.
Bootstrap support for Q4UEX0 as seed ortholog is 100%.

Group of orthologs #420. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 T.annulata:195

A8J597              	100.00%		Q4UA26              	100.00%
Bootstrap support for A8J597 as seed ortholog is 100%.
Bootstrap support for Q4UA26 as seed ortholog is 100%.

Group of orthologs #421. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 T.annulata:195

A8J8U1              	100.00%		Q4U9U3              	100.00%
Bootstrap support for A8J8U1 as seed ortholog is 100%.
Bootstrap support for Q4U9U3 as seed ortholog is 100%.

Group of orthologs #422. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 T.annulata:112

A8HN23              	100.00%		Q4UHS2              	100.00%
Bootstrap support for A8HN23 as seed ortholog is 99%.
Bootstrap support for Q4UHS2 as seed ortholog is 100%.

Group of orthologs #423. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 T.annulata:194

A8IEP3              	100.00%		Q4UC11              	100.00%
Bootstrap support for A8IEP3 as seed ortholog is 100%.
Bootstrap support for Q4UC11 as seed ortholog is 100%.

Group of orthologs #424. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 T.annulata:194

A8IRL9              	100.00%		Q4UAN7              	100.00%
Bootstrap support for A8IRL9 as seed ortholog is 100%.
Bootstrap support for Q4UAN7 as seed ortholog is 100%.

Group of orthologs #425. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 T.annulata:194

A8IX41              	100.00%		Q4UAU6              	100.00%
Bootstrap support for A8IX41 as seed ortholog is 100%.
Bootstrap support for Q4UAU6 as seed ortholog is 100%.

Group of orthologs #426. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:194

A8J493              	100.00%		Q4UAN5              	100.00%
Bootstrap support for A8J493 as seed ortholog is 100%.
Bootstrap support for Q4UAN5 as seed ortholog is 100%.

Group of orthologs #427. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 T.annulata:193

A8IZE7              	100.00%		Q4UFR7              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for Q4UFR7 as seed ortholog is 100%.

Group of orthologs #428. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 T.annulata:193

A8JGS3              	100.00%		Q4U8J8              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for Q4U8J8 as seed ortholog is 100%.

Group of orthologs #429. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 T.annulata:64

A8JHX0              	100.00%		Q4UBZ6              	100.00%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for Q4UBZ6 as seed ortholog is 98%.

Group of orthologs #430. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 T.annulata:193

A8JDV9              	100.00%		Q4UGE9              	100.00%
Bootstrap support for A8JDV9 as seed ortholog is 97%.
Bootstrap support for Q4UGE9 as seed ortholog is 100%.

Group of orthologs #431. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 T.annulata:192

A8HS59              	100.00%		Q4UF75              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for Q4UF75 as seed ortholog is 100%.

Group of orthologs #432. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 T.annulata:192

A8J805              	100.00%		Q4U8E3              	100.00%
Bootstrap support for A8J805 as seed ortholog is 100%.
Bootstrap support for Q4U8E3 as seed ortholog is 100%.

Group of orthologs #433. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 T.annulata:91

A8J856              	100.00%		Q4UDL4              	100.00%
Bootstrap support for A8J856 as seed ortholog is 99%.
Bootstrap support for Q4UDL4 as seed ortholog is 99%.

Group of orthologs #434. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 T.annulata:192

A8JFY4              	100.00%		Q4UCV6              	100.00%
Bootstrap support for A8JFY4 as seed ortholog is 94%.
Bootstrap support for Q4UCV6 as seed ortholog is 100%.

Group of orthologs #435. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 T.annulata:191

A8J6H8              	100.00%		Q4UDS4              	100.00%
Bootstrap support for A8J6H8 as seed ortholog is 100%.
Bootstrap support for Q4UDS4 as seed ortholog is 100%.

Group of orthologs #436. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 T.annulata:191

A8J9Q3              	100.00%		Q4UF18              	100.00%
Bootstrap support for A8J9Q3 as seed ortholog is 99%.
Bootstrap support for Q4UF18 as seed ortholog is 100%.

Group of orthologs #437. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 T.annulata:190

A8HQR0              	100.00%		Q4UEE6              	100.00%
Bootstrap support for A8HQR0 as seed ortholog is 100%.
Bootstrap support for Q4UEE6 as seed ortholog is 100%.

Group of orthologs #438. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 T.annulata:77

A8HQ77              	100.00%		Q4UH55              	100.00%
Bootstrap support for A8HQ77 as seed ortholog is 99%.
Bootstrap support for Q4UH55 as seed ortholog is 99%.

Group of orthologs #439. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 T.annulata:190

A8IQV5              	100.00%		Q4UDV1              	100.00%
Bootstrap support for A8IQV5 as seed ortholog is 100%.
Bootstrap support for Q4UDV1 as seed ortholog is 100%.

Group of orthologs #440. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 T.annulata:190

A8J0V5              	100.00%		Q4UB77              	100.00%
Bootstrap support for A8J0V5 as seed ortholog is 100%.
Bootstrap support for Q4UB77 as seed ortholog is 100%.

Group of orthologs #441. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 T.annulata:189

A8I2D8              	100.00%		Q4U9C7              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for Q4U9C7 as seed ortholog is 100%.

Group of orthologs #442. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 T.annulata:189

A8IVU0              	100.00%		Q4U9S6              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for Q4U9S6 as seed ortholog is 100%.

Group of orthologs #443. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 T.annulata:31

A8JC40              	100.00%		Q4UD03              	100.00%
Bootstrap support for A8JC40 as seed ortholog is 99%.
Bootstrap support for Q4UD03 as seed ortholog is 96%.

Group of orthologs #444. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 T.annulata:188

A8HSU7              	100.00%		Q4UGE8              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for Q4UGE8 as seed ortholog is 100%.

Group of orthologs #445. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 T.annulata:187

A8I5H6              	100.00%		Q4U8P0              	100.00%
Bootstrap support for A8I5H6 as seed ortholog is 98%.
Bootstrap support for Q4U8P0 as seed ortholog is 100%.

Group of orthologs #446. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 T.annulata:57

A8JII8              	100.00%		Q4UDF8              	100.00%
Bootstrap support for A8JII8 as seed ortholog is 98%.
Bootstrap support for Q4UDF8 as seed ortholog is 88%.

Group of orthologs #447. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 T.annulata:186

A8HWM8              	100.00%		Q4U9Y5              	100.00%
A8HWF6              	97.18%		
A8HSB5              	80.28%		
Q42680              	78.87%		
A8IR81              	78.87%		
A8JJE0              	54.93%		
Bootstrap support for A8HWM8 as seed ortholog is 100%.
Bootstrap support for Q4U9Y5 as seed ortholog is 100%.

Group of orthologs #448. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 T.annulata:186

A8J980              	100.00%		Q4UG91              	100.00%
Bootstrap support for A8J980 as seed ortholog is 100%.
Bootstrap support for Q4UG91 as seed ortholog is 100%.

Group of orthologs #449. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 T.annulata:15

A8HPM0              	100.00%		Q4UI73              	100.00%
Bootstrap support for A8HPM0 as seed ortholog is 100%.
Bootstrap support for Q4UI73 as seed ortholog is 69%.
Alternative seed ortholog is Q4UEU0 (15 bits away from this cluster)

Group of orthologs #450. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 T.annulata:97

A8HQ87              	100.00%		Q4UHZ2              	100.00%
Bootstrap support for A8HQ87 as seed ortholog is 99%.
Bootstrap support for Q4UHZ2 as seed ortholog is 99%.

Group of orthologs #451. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 T.annulata:185

A8ILF4              	100.00%		Q4UCT1              	100.00%
Bootstrap support for A8ILF4 as seed ortholog is 100%.
Bootstrap support for Q4UCT1 as seed ortholog is 100%.

Group of orthologs #452. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 T.annulata:184

A8IRE2              	100.00%		Q4U9U5              	100.00%
Bootstrap support for A8IRE2 as seed ortholog is 100%.
Bootstrap support for Q4U9U5 as seed ortholog is 100%.

Group of orthologs #453. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 T.annulata:52

A8J6A0              	100.00%		Q4UHG9              	100.00%
Bootstrap support for A8J6A0 as seed ortholog is 98%.
Bootstrap support for Q4UHG9 as seed ortholog is 95%.

Group of orthologs #454. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 T.annulata:184

A8JAL7              	100.00%		Q4UFE5              	100.00%
Bootstrap support for A8JAL7 as seed ortholog is 100%.
Bootstrap support for Q4UFE5 as seed ortholog is 100%.

Group of orthologs #455. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 T.annulata:4

A8JFI8              	100.00%		Q4UDY9              	100.00%
Bootstrap support for A8JFI8 as seed ortholog is 95%.
Bootstrap support for Q4UDY9 as seed ortholog is 56%.
Alternative seed ortholog is Q4UCA9 (4 bits away from this cluster)

Group of orthologs #456. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 T.annulata:142

A8ISQ2              	100.00%		Q4UC41              	100.00%
Bootstrap support for A8ISQ2 as seed ortholog is 100%.
Bootstrap support for Q4UC41 as seed ortholog is 99%.

Group of orthologs #457. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 T.annulata:182

A8HP17              	100.00%		Q4UCE5              	100.00%
Bootstrap support for A8HP17 as seed ortholog is 100%.
Bootstrap support for Q4UCE5 as seed ortholog is 100%.

Group of orthologs #458. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 T.annulata:182

A8J2N5              	100.00%		Q4UF94              	100.00%
Bootstrap support for A8J2N5 as seed ortholog is 100%.
Bootstrap support for Q4UF94 as seed ortholog is 100%.

Group of orthologs #459. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 T.annulata:181

A8IL68              	100.00%		Q4UJ57              	100.00%
Bootstrap support for A8IL68 as seed ortholog is 100%.
Bootstrap support for Q4UJ57 as seed ortholog is 100%.

Group of orthologs #460. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 T.annulata:181

A8J709              	100.00%		Q4U9J0              	100.00%
Bootstrap support for A8J709 as seed ortholog is 100%.
Bootstrap support for Q4U9J0 as seed ortholog is 100%.

Group of orthologs #461. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 T.annulata:181

A8J6L8              	100.00%		Q4UF26              	100.00%
Bootstrap support for A8J6L8 as seed ortholog is 99%.
Bootstrap support for Q4UF26 as seed ortholog is 100%.

Group of orthologs #462. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:72

A8IIJ6              	100.00%		Q4U9H0              	100.00%
A8IIJ1              	6.86%		
Bootstrap support for A8IIJ6 as seed ortholog is 98%.
Bootstrap support for Q4U9H0 as seed ortholog is 99%.

Group of orthologs #463. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 T.annulata:180

A8JBC7              	100.00%		Q4UIE9              	100.00%
A8IWK9              	9.02%		
Bootstrap support for A8JBC7 as seed ortholog is 100%.
Bootstrap support for Q4UIE9 as seed ortholog is 100%.

Group of orthologs #464. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:180

A8IZ93              	100.00%		Q4UII4              	100.00%
Bootstrap support for A8IZ93 as seed ortholog is 99%.
Bootstrap support for Q4UII4 as seed ortholog is 100%.

Group of orthologs #465. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 T.annulata:70

A8J5R1              	100.00%		Q4UHW1              	100.00%
Bootstrap support for A8J5R1 as seed ortholog is 100%.
Bootstrap support for Q4UHW1 as seed ortholog is 93%.

Group of orthologs #466. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:179

A8HTX3              	100.00%		Q4U9R8              	100.00%
Bootstrap support for A8HTX3 as seed ortholog is 99%.
Bootstrap support for Q4U9R8 as seed ortholog is 100%.

Group of orthologs #467. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 T.annulata:179

A8I9G5              	100.00%		Q4UEB8              	100.00%
Bootstrap support for A8I9G5 as seed ortholog is 100%.
Bootstrap support for Q4UEB8 as seed ortholog is 100%.

Group of orthologs #468. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 T.annulata:179

A8ISN1              	100.00%		Q4UBA8              	100.00%
Bootstrap support for A8ISN1 as seed ortholog is 100%.
Bootstrap support for Q4UBA8 as seed ortholog is 100%.

Group of orthologs #469. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 T.annulata:179

A8J409              	100.00%		Q4UI64              	100.00%
Bootstrap support for A8J409 as seed ortholog is 100%.
Bootstrap support for Q4UI64 as seed ortholog is 100%.

Group of orthologs #470. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 T.annulata:179

A8JGY3              	100.00%		Q4UHG4              	100.00%
Bootstrap support for A8JGY3 as seed ortholog is 96%.
Bootstrap support for Q4UHG4 as seed ortholog is 100%.

Group of orthologs #471. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 T.annulata:178

A8J0I7              	100.00%		Q4UD36              	100.00%
Bootstrap support for A8J0I7 as seed ortholog is 100%.
Bootstrap support for Q4UD36 as seed ortholog is 100%.

Group of orthologs #472. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 T.annulata:178

A8J6I8              	100.00%		Q4U9J1              	100.00%
Bootstrap support for A8J6I8 as seed ortholog is 100%.
Bootstrap support for Q4U9J1 as seed ortholog is 100%.

Group of orthologs #473. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 T.annulata:45

A8J5F6              	100.00%		Q4UC07              	100.00%
Bootstrap support for A8J5F6 as seed ortholog is 80%.
Bootstrap support for Q4UC07 as seed ortholog is 82%.

Group of orthologs #474. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 T.annulata:178

A8J0Q5              	100.00%		Q4UGZ3              	100.00%
Bootstrap support for A8J0Q5 as seed ortholog is 100%.
Bootstrap support for Q4UGZ3 as seed ortholog is 100%.

Group of orthologs #475. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 T.annulata:178

A8JFC3              	100.00%		Q4UDU6              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for Q4UDU6 as seed ortholog is 100%.

Group of orthologs #476. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 T.annulata:177

A8HN50              	100.00%		Q4UFD7              	100.00%
Bootstrap support for A8HN50 as seed ortholog is 100%.
Bootstrap support for Q4UFD7 as seed ortholog is 100%.

Group of orthologs #477. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 T.annulata:177

A8IRS5              	100.00%		Q4UE72              	100.00%
Bootstrap support for A8IRS5 as seed ortholog is 100%.
Bootstrap support for Q4UE72 as seed ortholog is 100%.

Group of orthologs #478. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 T.annulata:177

A8IFG0              	100.00%		Q4UIF1              	100.00%
Bootstrap support for A8IFG0 as seed ortholog is 100%.
Bootstrap support for Q4UIF1 as seed ortholog is 100%.

Group of orthologs #479. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 T.annulata:66

A8J2Y5              	100.00%		Q4UI18              	100.00%
Bootstrap support for A8J2Y5 as seed ortholog is 99%.
Bootstrap support for Q4UI18 as seed ortholog is 97%.

Group of orthologs #480. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 T.annulata:175

A8JD76              	100.00%		Q4U9R0              	100.00%
Bootstrap support for A8JD76 as seed ortholog is 99%.
Bootstrap support for Q4U9R0 as seed ortholog is 100%.

Group of orthologs #481. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:174

A8HPX6              	100.00%		Q4U8W0              	100.00%
Bootstrap support for A8HPX6 as seed ortholog is 99%.
Bootstrap support for Q4U8W0 as seed ortholog is 100%.

Group of orthologs #482. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 T.annulata:173

A8ICC8              	100.00%		Q4UDC6              	100.00%
Bootstrap support for A8ICC8 as seed ortholog is 99%.
Bootstrap support for Q4UDC6 as seed ortholog is 100%.

Group of orthologs #483. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 T.annulata:173

A8JHC3              	100.00%		Q4UDZ8              	100.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for Q4UDZ8 as seed ortholog is 100%.

Group of orthologs #484. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 T.annulata:172

A8JFB4              	100.00%		Q4UBP5              	100.00%
Q7XJ66              	6.38%		
Bootstrap support for A8JFB4 as seed ortholog is 99%.
Bootstrap support for Q4UBP5 as seed ortholog is 100%.

Group of orthologs #485. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 T.annulata:172

A8IB90              	100.00%		Q4UC74              	100.00%
Bootstrap support for A8IB90 as seed ortholog is 60%.
Alternative seed ortholog is A8I7C5 (8 bits away from this cluster)
Bootstrap support for Q4UC74 as seed ortholog is 100%.

Group of orthologs #486. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 T.annulata:172

A8J8G5              	100.00%		Q4UEP7              	100.00%
Bootstrap support for A8J8G5 as seed ortholog is 100%.
Bootstrap support for Q4UEP7 as seed ortholog is 100%.

Group of orthologs #487. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 T.annulata:171

A8HY98              	100.00%		Q4UI02              	100.00%
Bootstrap support for A8HY98 as seed ortholog is 100%.
Bootstrap support for Q4UI02 as seed ortholog is 100%.

Group of orthologs #488. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 T.annulata:99

A8IZG4              	100.00%		Q4UB51              	100.00%
Bootstrap support for A8IZG4 as seed ortholog is 99%.
Bootstrap support for Q4UB51 as seed ortholog is 97%.

Group of orthologs #489. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 T.annulata:171

A8IXB8              	100.00%		Q4UCT5              	100.00%
Bootstrap support for A8IXB8 as seed ortholog is 91%.
Bootstrap support for Q4UCT5 as seed ortholog is 100%.

Group of orthologs #490. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 T.annulata:171

A8J3D7              	100.00%		Q4UDW9              	100.00%
Bootstrap support for A8J3D7 as seed ortholog is 100%.
Bootstrap support for Q4UDW9 as seed ortholog is 100%.

Group of orthologs #491. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 T.annulata:169

A8IQD4              	100.00%		Q4UG04              	100.00%
Bootstrap support for A8IQD4 as seed ortholog is 100%.
Bootstrap support for Q4UG04 as seed ortholog is 100%.

Group of orthologs #492. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 T.annulata:169

A8JHZ6              	100.00%		Q4UE78              	100.00%
Bootstrap support for A8JHZ6 as seed ortholog is 100%.
Bootstrap support for Q4UE78 as seed ortholog is 100%.

Group of orthologs #493. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 T.annulata:168

A8IGH1              	100.00%		Q4UIZ9              	100.00%
Bootstrap support for A8IGH1 as seed ortholog is 81%.
Bootstrap support for Q4UIZ9 as seed ortholog is 100%.

Group of orthologs #494. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 T.annulata:167

A8IIS1              	100.00%		Q4UF90              	100.00%
Bootstrap support for A8IIS1 as seed ortholog is 100%.
Bootstrap support for Q4UF90 as seed ortholog is 100%.

Group of orthologs #495. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 T.annulata:167

A8J2A5              	100.00%		Q4UC09              	100.00%
Bootstrap support for A8J2A5 as seed ortholog is 98%.
Bootstrap support for Q4UC09 as seed ortholog is 100%.

Group of orthologs #496. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 T.annulata:167

A8J7H0              	100.00%		Q4U8U2              	100.00%
Bootstrap support for A8J7H0 as seed ortholog is 100%.
Bootstrap support for Q4U8U2 as seed ortholog is 100%.

Group of orthologs #497. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 T.annulata:166

A8J032              	100.00%		Q4U976              	100.00%
Bootstrap support for A8J032 as seed ortholog is 100%.
Bootstrap support for Q4U976 as seed ortholog is 100%.

Group of orthologs #498. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 T.annulata:166

A8J131              	100.00%		Q4UHX2              	100.00%
Bootstrap support for A8J131 as seed ortholog is 100%.
Bootstrap support for Q4UHX2 as seed ortholog is 100%.

Group of orthologs #499. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 T.annulata:166

A8J5V5              	100.00%		Q4UGB1              	100.00%
Bootstrap support for A8J5V5 as seed ortholog is 100%.
Bootstrap support for Q4UGB1 as seed ortholog is 100%.

Group of orthologs #500. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 T.annulata:94

A8JBM6              	100.00%		Q4UEW0              	100.00%
Bootstrap support for A8JBM6 as seed ortholog is 97%.
Bootstrap support for Q4UEW0 as seed ortholog is 98%.

Group of orthologs #501. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 T.annulata:164

A8IYJ4              	100.00%		Q4UI24              	100.00%
A8HME7              	7.83%		
A8IS63              	6.54%		
Bootstrap support for A8IYJ4 as seed ortholog is 100%.
Bootstrap support for Q4UI24 as seed ortholog is 100%.

Group of orthologs #502. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 T.annulata:38

A8IYA3              	100.00%		Q4U8F2              	100.00%
Bootstrap support for A8IYA3 as seed ortholog is 98%.
Bootstrap support for Q4U8F2 as seed ortholog is 91%.

Group of orthologs #503. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 T.annulata:20

A8ISU1              	100.00%		Q4UDP1              	100.00%
A8JIJ9              	7.53%		
Bootstrap support for A8ISU1 as seed ortholog is 81%.
Bootstrap support for Q4UDP1 as seed ortholog is 72%.
Alternative seed ortholog is Q4UF82 (20 bits away from this cluster)

Group of orthologs #504. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 T.annulata:163

A8I4X2              	100.00%		Q4U9A7              	100.00%
Bootstrap support for A8I4X2 as seed ortholog is 100%.
Bootstrap support for Q4U9A7 as seed ortholog is 100%.

Group of orthologs #505. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 T.annulata:163

A8IB70              	100.00%		Q4UGI4              	100.00%
Bootstrap support for A8IB70 as seed ortholog is 100%.
Bootstrap support for Q4UGI4 as seed ortholog is 100%.

Group of orthologs #506. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 T.annulata:163

A8IJX8              	100.00%		Q4UHG0              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for Q4UHG0 as seed ortholog is 100%.

Group of orthologs #507. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 T.annulata:163

A8J588              	100.00%		Q4U8L5              	100.00%
Bootstrap support for A8J588 as seed ortholog is 100%.
Bootstrap support for Q4U8L5 as seed ortholog is 100%.

Group of orthologs #508. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 T.annulata:57

A8IZV8              	100.00%		Q4UHU1              	100.00%
Bootstrap support for A8IZV8 as seed ortholog is 80%.
Bootstrap support for Q4UHU1 as seed ortholog is 99%.

Group of orthologs #509. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 T.annulata:163

A8JAQ9              	100.00%		Q4UBC0              	100.00%
Bootstrap support for A8JAQ9 as seed ortholog is 99%.
Bootstrap support for Q4UBC0 as seed ortholog is 100%.

Group of orthologs #510. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:162

A8HYR9              	100.00%		Q4UDH1              	100.00%
Bootstrap support for A8HYR9 as seed ortholog is 97%.
Bootstrap support for Q4UDH1 as seed ortholog is 100%.

Group of orthologs #511. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 T.annulata:24

A8I2Y4              	100.00%		Q4UED8              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for Q4UED8 as seed ortholog is 71%.
Alternative seed ortholog is Q4UG95 (24 bits away from this cluster)

Group of orthologs #512. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 T.annulata:98

A8J3B0              	100.00%		Q4UAA7              	100.00%
Bootstrap support for A8J3B0 as seed ortholog is 99%.
Bootstrap support for Q4UAA7 as seed ortholog is 99%.

Group of orthologs #513. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 T.annulata:160

A8HQY2              	100.00%		Q4UIF4              	100.00%
A8JC09              	18.97%		
Bootstrap support for A8HQY2 as seed ortholog is 100%.
Bootstrap support for Q4UIF4 as seed ortholog is 100%.

Group of orthologs #514. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:82

A8IL21              	100.00%		Q4UAC9              	100.00%
A8IJ60              	13.33%		
Bootstrap support for A8IL21 as seed ortholog is 91%.
Bootstrap support for Q4UAC9 as seed ortholog is 99%.

Group of orthologs #515. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 T.annulata:160

A8I297              	100.00%		Q4UI77              	100.00%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for Q4UI77 as seed ortholog is 100%.

Group of orthologs #516. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 T.annulata:160

A8JAI8              	100.00%		Q4UGD6              	100.00%
Bootstrap support for A8JAI8 as seed ortholog is 100%.
Bootstrap support for Q4UGD6 as seed ortholog is 100%.

Group of orthologs #517. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 T.annulata:159

A8J513              	100.00%		Q4UBZ4              	100.00%
A2BCY1              	7.32%		
Bootstrap support for A8J513 as seed ortholog is 100%.
Bootstrap support for Q4UBZ4 as seed ortholog is 100%.

Group of orthologs #518. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 T.annulata:158

A8JJ26              	100.00%		Q4U8E1              	100.00%
Q8HEB4              	11.60%		
Bootstrap support for A8JJ26 as seed ortholog is 100%.
Bootstrap support for Q4U8E1 as seed ortholog is 100%.

Group of orthologs #519. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 T.annulata:158

A8HMG7              	100.00%		Q4U8S3              	100.00%
Bootstrap support for A8HMG7 as seed ortholog is 100%.
Bootstrap support for Q4U8S3 as seed ortholog is 100%.

Group of orthologs #520. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 T.annulata:158

A8J149              	100.00%		Q4UE57              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for Q4UE57 as seed ortholog is 100%.

Group of orthologs #521. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 T.annulata:158

A8JAN2              	100.00%		Q4UEN1              	100.00%
Bootstrap support for A8JAN2 as seed ortholog is 100%.
Bootstrap support for Q4UEN1 as seed ortholog is 100%.

Group of orthologs #522. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 T.annulata:51

A8JGB3              	100.00%		Q4UBP7              	100.00%
Bootstrap support for A8JGB3 as seed ortholog is 100%.
Bootstrap support for Q4UBP7 as seed ortholog is 86%.

Group of orthologs #523. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 T.annulata:157

A8J6P3              	100.00%		Q4U8S7              	100.00%
Bootstrap support for A8J6P3 as seed ortholog is 100%.
Bootstrap support for Q4U8S7 as seed ortholog is 100%.

Group of orthologs #524. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 T.annulata:156

A8I901              	100.00%		Q4U9X7              	100.00%
Bootstrap support for A8I901 as seed ortholog is 100%.
Bootstrap support for Q4U9X7 as seed ortholog is 100%.

Group of orthologs #525. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 T.annulata:156

A8IZ78              	100.00%		Q4UFQ6              	100.00%
Bootstrap support for A8IZ78 as seed ortholog is 100%.
Bootstrap support for Q4UFQ6 as seed ortholog is 100%.

Group of orthologs #526. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 T.annulata:155

A8IC04              	100.00%		Q4UFB6              	100.00%
Bootstrap support for A8IC04 as seed ortholog is 100%.
Bootstrap support for Q4UFB6 as seed ortholog is 100%.

Group of orthologs #527. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 T.annulata:56

A8IH35              	100.00%		Q4UHV3              	100.00%
Bootstrap support for A8IH35 as seed ortholog is 97%.
Bootstrap support for Q4UHV3 as seed ortholog is 99%.

Group of orthologs #528. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 T.annulata:155

A8J8T5              	100.00%		Q4UG74              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for Q4UG74 as seed ortholog is 100%.

Group of orthologs #529. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 T.annulata:154

A8J274              	100.00%		Q4UD31              	100.00%
Bootstrap support for A8J274 as seed ortholog is 99%.
Bootstrap support for Q4UD31 as seed ortholog is 100%.

Group of orthologs #530. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 T.annulata:153

A8IW75              	100.00%		Q4U9Q8              	100.00%
A8IW84              	100.00%		
A8HV98              	63.76%		
A8IJS4              	63.76%		
A8IR69              	63.76%		
A8HWX1              	63.09%		
A8HWE3              	63.09%		
A8HWX5              	63.09%		
A8IR79              	63.09%		
A8JIN6              	63.09%		
A8JDE1              	63.09%		
A8HSB2              	61.74%		
A8JDH1              	61.74%		
A8JDC9              	61.07%		
A8JDC0              	60.40%		
A8IJR6              	59.73%		
A8JJQ6              	58.39%		
A8JJS0              	48.99%		
A8JJV5              	28.19%		
A8JJN6              	23.49%		
Bootstrap support for A8IW75 as seed ortholog is 99%.
Bootstrap support for A8IW84 as seed ortholog is 99%.
Bootstrap support for Q4U9Q8 as seed ortholog is 100%.

Group of orthologs #531. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 T.annulata:153

A8IVW9              	100.00%		Q4UF34              	100.00%
Bootstrap support for A8IVW9 as seed ortholog is 100%.
Bootstrap support for Q4UF34 as seed ortholog is 100%.

Group of orthologs #532. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 T.annulata:153

A8IZH0              	100.00%		Q4UEH2              	100.00%
Bootstrap support for A8IZH0 as seed ortholog is 100%.
Bootstrap support for Q4UEH2 as seed ortholog is 100%.

Group of orthologs #533. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 T.annulata:153

A8JCT1              	100.00%		Q4UAL4              	100.00%
Bootstrap support for A8JCT1 as seed ortholog is 99%.
Bootstrap support for Q4UAL4 as seed ortholog is 100%.

Group of orthologs #534. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 T.annulata:152

A8IQQ5              	100.00%		Q4UEB4              	100.00%
Bootstrap support for A8IQQ5 as seed ortholog is 100%.
Bootstrap support for Q4UEB4 as seed ortholog is 100%.

Group of orthologs #535. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 T.annulata:152

A8IXQ0              	100.00%		Q4UCR4              	100.00%
Bootstrap support for A8IXQ0 as seed ortholog is 100%.
Bootstrap support for Q4UCR4 as seed ortholog is 100%.

Group of orthologs #536. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 T.annulata:152

A8J1Q1              	100.00%		Q4UEJ4              	100.00%
Bootstrap support for A8J1Q1 as seed ortholog is 100%.
Bootstrap support for Q4UEJ4 as seed ortholog is 100%.

Group of orthologs #537. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 T.annulata:152

A8J8S6              	100.00%		Q4UH32              	100.00%
Bootstrap support for A8J8S6 as seed ortholog is 92%.
Bootstrap support for Q4UH32 as seed ortholog is 100%.

Group of orthologs #538. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 T.annulata:151

A8JAS5              	100.00%		Q4UC36              	100.00%
A8IM62              	18.48%		Q4UC92              	5.87%
                    	       		Q4UC91              	5.74%
Bootstrap support for A8JAS5 as seed ortholog is 100%.
Bootstrap support for Q4UC36 as seed ortholog is 100%.

Group of orthologs #539. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 T.annulata:151

A8JBD9              	100.00%		Q4UB74              	100.00%
Bootstrap support for A8JBD9 as seed ortholog is 100%.
Bootstrap support for Q4UB74 as seed ortholog is 100%.

Group of orthologs #540. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 T.annulata:64

A8J5V8              	100.00%		Q4UIN3              	100.00%
Bootstrap support for A8J5V8 as seed ortholog is 83%.
Bootstrap support for Q4UIN3 as seed ortholog is 99%.

Group of orthologs #541. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 T.annulata:151

A8JCS0              	100.00%		Q4UG60              	100.00%
Bootstrap support for A8JCS0 as seed ortholog is 100%.
Bootstrap support for Q4UG60 as seed ortholog is 100%.

Group of orthologs #542. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 T.annulata:151

A8JH29              	100.00%		Q4UCL2              	100.00%
Bootstrap support for A8JH29 as seed ortholog is 100%.
Bootstrap support for Q4UCL2 as seed ortholog is 100%.

Group of orthologs #543. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 T.annulata:150

A8HPG2              	100.00%		Q4UF33              	100.00%
Bootstrap support for A8HPG2 as seed ortholog is 100%.
Bootstrap support for Q4UF33 as seed ortholog is 100%.

Group of orthologs #544. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 T.annulata:150

A8HZC5              	100.00%		Q4UDI9              	100.00%
Bootstrap support for A8HZC5 as seed ortholog is 100%.
Bootstrap support for Q4UDI9 as seed ortholog is 100%.

Group of orthologs #545. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:149

A8J9H8              	100.00%		Q4UEC7              	100.00%
A8JH12              	42.14%		
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for Q4UEC7 as seed ortholog is 100%.

Group of orthologs #546. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 T.annulata:149

A8HQB8              	100.00%		Q4U8P8              	100.00%
Bootstrap support for A8HQB8 as seed ortholog is 89%.
Bootstrap support for Q4U8P8 as seed ortholog is 100%.

Group of orthologs #547. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:149

A8HQJ4              	100.00%		Q4UAX3              	100.00%
Bootstrap support for A8HQJ4 as seed ortholog is 100%.
Bootstrap support for Q4UAX3 as seed ortholog is 100%.

Group of orthologs #548. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:149

A8IIC7              	100.00%		Q4U9H3              	100.00%
Bootstrap support for A8IIC7 as seed ortholog is 100%.
Bootstrap support for Q4U9H3 as seed ortholog is 100%.

Group of orthologs #549. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:7

A8ILT1              	100.00%		Q4UG80              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 100%.
Bootstrap support for Q4UG80 as seed ortholog is 51%.
Alternative seed ortholog is Q4UHD6 (7 bits away from this cluster)

Group of orthologs #550. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:149

A8J2J9              	100.00%		Q4UAZ7              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for Q4UAZ7 as seed ortholog is 100%.

Group of orthologs #551. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:149

A8J304              	100.00%		Q4UGR5              	100.00%
Bootstrap support for A8J304 as seed ortholog is 100%.
Bootstrap support for Q4UGR5 as seed ortholog is 100%.

Group of orthologs #552. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 T.annulata:149

A8JBC8              	100.00%		Q4UE08              	100.00%
Bootstrap support for A8JBC8 as seed ortholog is 100%.
Bootstrap support for Q4UE08 as seed ortholog is 100%.

Group of orthologs #553. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 T.annulata:148

A8IDN7              	100.00%		Q4U8Q2              	100.00%
Bootstrap support for A8IDN7 as seed ortholog is 100%.
Bootstrap support for Q4U8Q2 as seed ortholog is 100%.

Group of orthologs #554. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 T.annulata:148

A8IF01              	100.00%		Q4UAP1              	100.00%
Bootstrap support for A8IF01 as seed ortholog is 100%.
Bootstrap support for Q4UAP1 as seed ortholog is 100%.

Group of orthologs #555. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 T.annulata:148

A8I032              	100.00%		Q4UIE5              	100.00%
Bootstrap support for A8I032 as seed ortholog is 100%.
Bootstrap support for Q4UIE5 as seed ortholog is 100%.

Group of orthologs #556. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 T.annulata:148

A8IJL3              	100.00%		Q4UC75              	100.00%
Bootstrap support for A8IJL3 as seed ortholog is 100%.
Bootstrap support for Q4UC75 as seed ortholog is 100%.

Group of orthologs #557. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 T.annulata:148

A8II85              	100.00%		Q4UDS3              	100.00%
Bootstrap support for A8II85 as seed ortholog is 100%.
Bootstrap support for Q4UDS3 as seed ortholog is 100%.

Group of orthologs #558. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 T.annulata:57

A8I5R9              	100.00%		Q4UCF7              	100.00%
A8J7T7              	100.00%		P25781              	100.00%
                    	       		Q4UCF6              	89.91%
                    	       		Q4UCF1              	30.01%
                    	       		Q4UCF2              	29.48%
                    	       		Q4UCF4              	28.82%
                    	       		Q4UCF5              	25.23%
Bootstrap support for A8I5R9 as seed ortholog is 100%.
Bootstrap support for A8J7T7 as seed ortholog is 100%.
Bootstrap support for Q4UCF7 as seed ortholog is 91%.
Bootstrap support for P25781 as seed ortholog is 79%.

Group of orthologs #559. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 T.annulata:147

A8JBE4              	100.00%		Q4UF45              	100.00%
Bootstrap support for A8JBE4 as seed ortholog is 100%.
Bootstrap support for Q4UF45 as seed ortholog is 100%.

Group of orthologs #560. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 T.annulata:146

A8HMG4              	100.00%		Q4U9P8              	100.00%
Bootstrap support for A8HMG4 as seed ortholog is 100%.
Bootstrap support for Q4U9P8 as seed ortholog is 100%.

Group of orthologs #561. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 T.annulata:44

A8IB12              	100.00%		Q4UB00              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 100%.
Bootstrap support for Q4UB00 as seed ortholog is 83%.

Group of orthologs #562. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 T.annulata:102

A8IW48              	100.00%		Q4UA15              	100.00%
Bootstrap support for A8IW48 as seed ortholog is 100%.
Bootstrap support for Q4UA15 as seed ortholog is 99%.

Group of orthologs #563. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 T.annulata:146

A8IWT5              	100.00%		Q4UIM1              	100.00%
Bootstrap support for A8IWT5 as seed ortholog is 100%.
Bootstrap support for Q4UIM1 as seed ortholog is 100%.

Group of orthologs #564. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 T.annulata:146

Q9AU02              	100.00%		Q4UHL6              	100.00%
Bootstrap support for Q9AU02 as seed ortholog is 100%.
Bootstrap support for Q4UHL6 as seed ortholog is 100%.

Group of orthologs #565. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 T.annulata:144

A8JEL2              	100.00%		Q4UB88              	100.00%
A8HS63              	13.33%		
Bootstrap support for A8JEL2 as seed ortholog is 100%.
Bootstrap support for Q4UB88 as seed ortholog is 100%.

Group of orthologs #566. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 T.annulata:144

A8IJ00              	100.00%		Q4U8P6              	100.00%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for Q4U8P6 as seed ortholog is 100%.

Group of orthologs #567. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 T.annulata:144

A8JG68              	100.00%		Q4UHG5              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for Q4UHG5 as seed ortholog is 100%.

Group of orthologs #568. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 T.annulata:143

A8JGI3              	100.00%		Q4UHJ6              	100.00%
A8HNW2              	23.41%		
A8HNV8              	23.03%		
A8J2G0              	22.65%		
A8HNV6              	22.56%		
A8HRY6              	22.09%		
A8I3L6              	21.42%		
A8HPI9              	20.85%		
A8J9Z4              	20.57%		
A8JGQ5              	20.38%		
A8JDI4              	19.72%		
A8I2W8              	19.15%		
A8JBS1              	18.48%		
A8JGV2              	17.54%		
A8J0R9              	17.44%		
A8J0S4              	15.64%		
A8ITN3              	11.37%		
Bootstrap support for A8JGI3 as seed ortholog is 68%.
Alternative seed ortholog is A8IKH9 (14 bits away from this cluster)
Bootstrap support for Q4UHJ6 as seed ortholog is 100%.

Group of orthologs #569. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 T.annulata:143

A8HT40              	100.00%		Q4UIB7              	100.00%
Bootstrap support for A8HT40 as seed ortholog is 100%.
Bootstrap support for Q4UIB7 as seed ortholog is 100%.

Group of orthologs #570. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 T.annulata:143

A8J2G4              	100.00%		Q4UAJ4              	100.00%
Bootstrap support for A8J2G4 as seed ortholog is 100%.
Bootstrap support for Q4UAJ4 as seed ortholog is 100%.

Group of orthologs #571. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 T.annulata:100

A8J7F5              	100.00%		Q4UEP2              	100.00%
Bootstrap support for A8J7F5 as seed ortholog is 100%.
Bootstrap support for Q4UEP2 as seed ortholog is 100%.

Group of orthologs #572. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 T.annulata:143

A8J951              	100.00%		Q4UDF3              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for Q4UDF3 as seed ortholog is 100%.

Group of orthologs #573. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 T.annulata:143

A8JGI9              	100.00%		Q4U8K4              	100.00%
Bootstrap support for A8JGI9 as seed ortholog is 100%.
Bootstrap support for Q4U8K4 as seed ortholog is 100%.

Group of orthologs #574. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 T.annulata:142

A8ICT1              	100.00%		Q4UE06              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for Q4UE06 as seed ortholog is 100%.

Group of orthologs #575. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 T.annulata:141

A8JIJ6              	100.00%		Q4UER3              	100.00%
A8IEJ9              	38.17%		
A8HSS9              	28.17%		
A8J0V3              	22.96%		
Bootstrap support for A8JIJ6 as seed ortholog is 100%.
Bootstrap support for Q4UER3 as seed ortholog is 100%.

Group of orthologs #576. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 T.annulata:141

A8JCA4              	100.00%		Q4UGU1              	100.00%
A8I108              	20.92%		
Bootstrap support for A8JCA4 as seed ortholog is 76%.
Bootstrap support for Q4UGU1 as seed ortholog is 100%.

Group of orthologs #577. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 T.annulata:141

A8J7S5              	100.00%		Q4UAZ5              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for Q4UAZ5 as seed ortholog is 100%.

Group of orthologs #578. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 T.annulata:141

A8J2R2              	100.00%		Q4UIT2              	100.00%
Bootstrap support for A8J2R2 as seed ortholog is 100%.
Bootstrap support for Q4UIT2 as seed ortholog is 100%.

Group of orthologs #579. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 T.annulata:140

A8HP81              	100.00%		Q4UA63              	100.00%
Bootstrap support for A8HP81 as seed ortholog is 83%.
Bootstrap support for Q4UA63 as seed ortholog is 100%.

Group of orthologs #580. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:140

A8IIN4              	100.00%		Q4U8G3              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 100%.
Bootstrap support for Q4U8G3 as seed ortholog is 100%.

Group of orthologs #581. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:140

A8IM74              	100.00%		Q4U9I5              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for Q4U9I5 as seed ortholog is 100%.

Group of orthologs #582. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:40

A8ICX5              	100.00%		Q4UFZ3              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for Q4UFZ3 as seed ortholog is 85%.

Group of orthologs #583. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:140

A8J239              	100.00%		Q4UB99              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for Q4UB99 as seed ortholog is 100%.

Group of orthologs #584. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 T.annulata:140

A8J212              	100.00%		Q4UBZ5              	100.00%
Bootstrap support for A8J212 as seed ortholog is 100%.
Bootstrap support for Q4UBZ5 as seed ortholog is 100%.

Group of orthologs #585. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 T.annulata:44

A8J5J2              	100.00%		Q4UFB7              	100.00%
Bootstrap support for A8J5J2 as seed ortholog is 52%.
Alternative seed ortholog is A8JB79 (6 bits away from this cluster)
Bootstrap support for Q4UFB7 as seed ortholog is 90%.

Group of orthologs #586. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 T.annulata:139

A8IQ37              	100.00%		Q4UFV3              	100.00%
A8J0P8              	20.11%		
A8J5F0              	9.35%		
A8J101              	9.07%		
Bootstrap support for A8IQ37 as seed ortholog is 85%.
Bootstrap support for Q4UFV3 as seed ortholog is 100%.

Group of orthologs #587. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8HRN2              	100.00%		Q4UB18              	100.00%
A8HRN8              	55.46%		
Bootstrap support for A8HRN2 as seed ortholog is 100%.
Bootstrap support for Q4UB18 as seed ortholog is 100%.

Group of orthologs #588. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8I0I1              	100.00%		Q4UA42              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for Q4UA42 as seed ortholog is 100%.

Group of orthologs #589. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8IRQ1              	100.00%		Q4UBE3              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for Q4UBE3 as seed ortholog is 100%.

Group of orthologs #590. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8J757              	100.00%		Q4U8P3              	100.00%
Bootstrap support for A8J757 as seed ortholog is 100%.
Bootstrap support for Q4U8P3 as seed ortholog is 100%.

Group of orthologs #591. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8J5Y9              	100.00%		Q4UA87              	100.00%
Bootstrap support for A8J5Y9 as seed ortholog is 100%.
Bootstrap support for Q4UA87 as seed ortholog is 100%.

Group of orthologs #592. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8J8M9              	100.00%		Q4UAD7              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 100%.
Bootstrap support for Q4UAD7 as seed ortholog is 100%.

Group of orthologs #593. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 T.annulata:139

A8JHR1              	100.00%		Q4UGC5              	100.00%
Bootstrap support for A8JHR1 as seed ortholog is 100%.
Bootstrap support for Q4UGC5 as seed ortholog is 100%.

Group of orthologs #594. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 T.annulata:86

A8J055              	100.00%		Q4UAP8              	100.00%
A8I9K7              	13.89%		
Bootstrap support for A8J055 as seed ortholog is 100%.
Bootstrap support for Q4UAP8 as seed ortholog is 98%.

Group of orthologs #595. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 T.annulata:83

A8J5T0              	100.00%		Q4UEA0              	100.00%
Bootstrap support for A8J5T0 as seed ortholog is 100%.
Bootstrap support for Q4UEA0 as seed ortholog is 99%.

Group of orthologs #596. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 T.annulata:138

A8JGK5              	100.00%		Q4UE81              	100.00%
Bootstrap support for A8JGK5 as seed ortholog is 100%.
Bootstrap support for Q4UE81 as seed ortholog is 100%.

Group of orthologs #597. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 T.annulata:53

A8IYF7              	100.00%		Q4UCN0              	100.00%
Bootstrap support for A8IYF7 as seed ortholog is 99%.
Bootstrap support for Q4UCN0 as seed ortholog is 92%.

Group of orthologs #598. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 T.annulata:137

A8JHY2              	100.00%		Q4UA41              	100.00%
Bootstrap support for A8JHY2 as seed ortholog is 100%.
Bootstrap support for Q4UA41 as seed ortholog is 100%.

Group of orthologs #599. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 T.annulata:136

A8JDZ5              	100.00%		Q4UBJ8              	100.00%
A8IUU0              	49.45%		
A8IS88              	22.61%		
A8JBI1              	21.14%		
A8HNJ4              	16.36%		
Bootstrap support for A8JDZ5 as seed ortholog is 93%.
Bootstrap support for Q4UBJ8 as seed ortholog is 100%.

Group of orthologs #600. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 T.annulata:136

A8HYU2              	100.00%		Q4UDA1              	100.00%
Bootstrap support for A8HYU2 as seed ortholog is 100%.
Bootstrap support for Q4UDA1 as seed ortholog is 100%.

Group of orthologs #601. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 T.annulata:136

A8I1Y7              	100.00%		Q4UFG7              	100.00%
Bootstrap support for A8I1Y7 as seed ortholog is 100%.
Bootstrap support for Q4UFG7 as seed ortholog is 100%.

Group of orthologs #602. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 T.annulata:136

A8J0Z8              	100.00%		Q4U8H5              	100.00%
Bootstrap support for A8J0Z8 as seed ortholog is 100%.
Bootstrap support for Q4U8H5 as seed ortholog is 100%.

Group of orthologs #603. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 T.annulata:135

A8J7Y2              	100.00%		Q4UIK7              	100.00%
Bootstrap support for A8J7Y2 as seed ortholog is 100%.
Bootstrap support for Q4UIK7 as seed ortholog is 100%.

Group of orthologs #604. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 T.annulata:135

Q39568              	100.00%		Q4UAM6              	100.00%
Bootstrap support for Q39568 as seed ortholog is 99%.
Bootstrap support for Q4UAM6 as seed ortholog is 100%.

Group of orthologs #605. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 T.annulata:134

A8ISK2              	100.00%		Q4UGG7              	100.00%
Bootstrap support for A8ISK2 as seed ortholog is 100%.
Bootstrap support for Q4UGG7 as seed ortholog is 100%.

Group of orthologs #606. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 T.annulata:134

Q84TR5              	100.00%		Q4UB44              	100.00%
Bootstrap support for Q84TR5 as seed ortholog is 100%.
Bootstrap support for Q4UB44 as seed ortholog is 100%.

Group of orthologs #607. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 T.annulata:133

A8J0Y7              	100.00%		Q4UEQ3              	100.00%
Bootstrap support for A8J0Y7 as seed ortholog is 100%.
Bootstrap support for Q4UEQ3 as seed ortholog is 100%.

Group of orthologs #608. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:133

Q8VZX3              	100.00%		Q4UD32              	100.00%
Bootstrap support for Q8VZX3 as seed ortholog is 99%.
Bootstrap support for Q4UD32 as seed ortholog is 100%.

Group of orthologs #609. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 T.annulata:132

A8IJ79              	100.00%		Q4UCL0              	100.00%
Bootstrap support for A8IJ79 as seed ortholog is 99%.
Bootstrap support for Q4UCL0 as seed ortholog is 100%.

Group of orthologs #610. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 T.annulata:132

A8I762              	100.00%		Q4UJ60              	100.00%
Bootstrap support for A8I762 as seed ortholog is 99%.
Bootstrap support for Q4UJ60 as seed ortholog is 100%.

Group of orthologs #611. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 T.annulata:58

A8JCX6              	100.00%		Q4UA07              	100.00%
Bootstrap support for A8JCX6 as seed ortholog is 100%.
Bootstrap support for Q4UA07 as seed ortholog is 95%.

Group of orthologs #612. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 T.annulata:132

A8JDZ2              	100.00%		Q4UA18              	100.00%
Bootstrap support for A8JDZ2 as seed ortholog is 98%.
Bootstrap support for Q4UA18 as seed ortholog is 100%.

Group of orthologs #613. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 T.annulata:131

Q75NZ3              	100.00%		Q4UFP9              	100.00%
A8IYW1              	28.28%		
A8J4Q0              	27.34%		
Q6IYG4              	6.37%		
Bootstrap support for Q75NZ3 as seed ortholog is 100%.
Bootstrap support for Q4UFP9 as seed ortholog is 100%.

Group of orthologs #614. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 T.annulata:131

A8IV36              	100.00%		Q4UHX5              	100.00%
Bootstrap support for A8IV36 as seed ortholog is 100%.
Bootstrap support for Q4UHX5 as seed ortholog is 100%.

Group of orthologs #615. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 T.annulata:131

A8J6M2              	100.00%		Q4UBE9              	100.00%
Bootstrap support for A8J6M2 as seed ortholog is 100%.
Bootstrap support for Q4UBE9 as seed ortholog is 100%.

Group of orthologs #616. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 T.annulata:131

A8JGY2              	100.00%		Q4UGN4              	100.00%
Bootstrap support for A8JGY2 as seed ortholog is 100%.
Bootstrap support for Q4UGN4 as seed ortholog is 100%.

Group of orthologs #617. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 T.annulata:131

A8JF84              	100.00%		Q4UIE3              	100.00%
Bootstrap support for A8JF84 as seed ortholog is 100%.
Bootstrap support for Q4UIE3 as seed ortholog is 100%.

Group of orthologs #618. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 T.annulata:130

A8I0Y2              	100.00%		Q4UBK0              	100.00%
Bootstrap support for A8I0Y2 as seed ortholog is 100%.
Bootstrap support for Q4UBK0 as seed ortholog is 100%.

Group of orthologs #619. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 T.annulata:130

A8IC07              	100.00%		Q4UAV7              	100.00%
Bootstrap support for A8IC07 as seed ortholog is 100%.
Bootstrap support for Q4UAV7 as seed ortholog is 100%.

Group of orthologs #620. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 T.annulata:129

A8HW92              	100.00%		Q4UGQ0              	100.00%
Bootstrap support for A8HW92 as seed ortholog is 100%.
Bootstrap support for Q4UGQ0 as seed ortholog is 100%.

Group of orthologs #621. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 T.annulata:129

A8J505              	100.00%		Q4U9W3              	100.00%
Bootstrap support for A8J505 as seed ortholog is 100%.
Bootstrap support for Q4U9W3 as seed ortholog is 100%.

Group of orthologs #622. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 T.annulata:129

A8JDV2              	100.00%		Q4U8I7              	100.00%
Bootstrap support for A8JDV2 as seed ortholog is 100%.
Bootstrap support for Q4U8I7 as seed ortholog is 100%.

Group of orthologs #623. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 T.annulata:8

A8JD57              	100.00%		Q4UID6              	100.00%
A8IA03              	10.66%		
A8IIZ5              	9.11%		
A8ITH5              	6.20%		
Bootstrap support for A8JD57 as seed ortholog is 94%.
Bootstrap support for Q4UID6 as seed ortholog is 62%.
Alternative seed ortholog is Q4UDJ9 (8 bits away from this cluster)

Group of orthologs #624. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 T.annulata:127

A8J507              	100.00%		Q4UIZ7              	100.00%
Bootstrap support for A8J507 as seed ortholog is 100%.
Bootstrap support for Q4UIZ7 as seed ortholog is 100%.

Group of orthologs #625. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 T.annulata:126

A8J593              	100.00%		Q4U9N7              	100.00%
Bootstrap support for A8J593 as seed ortholog is 100%.
Bootstrap support for Q4U9N7 as seed ortholog is 100%.

Group of orthologs #626. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 T.annulata:125

A8J0A1              	100.00%		Q4UET2              	100.00%
A8IZB6              	17.53%		
Bootstrap support for A8J0A1 as seed ortholog is 98%.
Bootstrap support for Q4UET2 as seed ortholog is 100%.

Group of orthologs #627. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 T.annulata:125

A8ICF7              	100.00%		Q4UF20              	100.00%
Bootstrap support for A8ICF7 as seed ortholog is 100%.
Bootstrap support for Q4UF20 as seed ortholog is 100%.

Group of orthologs #628. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 T.annulata:125

A8IHI1              	100.00%		Q4UI54              	100.00%
Bootstrap support for A8IHI1 as seed ortholog is 100%.
Bootstrap support for Q4UI54 as seed ortholog is 100%.

Group of orthologs #629. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 T.annulata:55

A8J5D5              	100.00%		Q4UEF1              	100.00%
                    	       		Q4UEF4              	100.00%
Bootstrap support for A8J5D5 as seed ortholog is 100%.
Bootstrap support for Q4UEF1 as seed ortholog is 86%.
Bootstrap support for Q4UEF4 as seed ortholog is 86%.

Group of orthologs #630. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 T.annulata:124

A8IZY1              	100.00%		Q4UGN9              	100.00%
Bootstrap support for A8IZY1 as seed ortholog is 100%.
Bootstrap support for Q4UGN9 as seed ortholog is 100%.

Group of orthologs #631. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:123

A8JGU7              	100.00%		Q4UG06              	100.00%
                    	       		Q4UG08              	100.00%
Bootstrap support for A8JGU7 as seed ortholog is 100%.
Bootstrap support for Q4UG06 as seed ortholog is 100%.
Bootstrap support for Q4UG08 as seed ortholog is 100%.

Group of orthologs #632. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:17

A8HRV5              	100.00%		Q4UE83              	100.00%
Bootstrap support for A8HRV5 as seed ortholog is 100%.
Bootstrap support for Q4UE83 as seed ortholog is 61%.
Alternative seed ortholog is Q4UD23 (17 bits away from this cluster)

Group of orthologs #633. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:123

A8IBG1              	100.00%		Q4UDT9              	100.00%
Bootstrap support for A8IBG1 as seed ortholog is 100%.
Bootstrap support for Q4UDT9 as seed ortholog is 100%.

Group of orthologs #634. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:123

A8IGJ8              	100.00%		Q4UHP1              	100.00%
Bootstrap support for A8IGJ8 as seed ortholog is 100%.
Bootstrap support for Q4UHP1 as seed ortholog is 100%.

Group of orthologs #635. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:123

A8J9A9              	100.00%		Q4U9M1              	100.00%
Bootstrap support for A8J9A9 as seed ortholog is 100%.
Bootstrap support for Q4U9M1 as seed ortholog is 100%.

Group of orthologs #636. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 T.annulata:123

A8J9T0              	100.00%		Q4UB67              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for Q4UB67 as seed ortholog is 100%.

Group of orthologs #637. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 T.annulata:122

A8J7U7              	100.00%		Q4UCK5              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for Q4UCK5 as seed ortholog is 100%.

Group of orthologs #638. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:121

A8J1X5              	100.00%		Q4UER7              	100.00%
A8IVY4              	31.27%		
Bootstrap support for A8J1X5 as seed ortholog is 100%.
Bootstrap support for Q4UER7 as seed ortholog is 100%.

Group of orthologs #639. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:121

A8ILG8              	100.00%		Q4UIB6              	100.00%
Bootstrap support for A8ILG8 as seed ortholog is 100%.
Bootstrap support for Q4UIB6 as seed ortholog is 100%.

Group of orthologs #640. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:121

A8IUV7              	100.00%		Q4UGE7              	100.00%
Bootstrap support for A8IUV7 as seed ortholog is 100%.
Bootstrap support for Q4UGE7 as seed ortholog is 100%.

Group of orthologs #641. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:121

A8IS22              	100.00%		Q4UIH3              	100.00%
Bootstrap support for A8IS22 as seed ortholog is 100%.
Bootstrap support for Q4UIH3 as seed ortholog is 100%.

Group of orthologs #642. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:121

A8IZ36              	100.00%		Q4UHI2              	100.00%
Bootstrap support for A8IZ36 as seed ortholog is 100%.
Bootstrap support for Q4UHI2 as seed ortholog is 100%.

Group of orthologs #643. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 T.annulata:121

A8JIP6              	100.00%		Q4UCW0              	100.00%
Bootstrap support for A8JIP6 as seed ortholog is 100%.
Bootstrap support for Q4UCW0 as seed ortholog is 100%.

Group of orthologs #644. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 T.annulata:120

A8HRQ4              	100.00%		Q4UCJ6              	100.00%
A8IKV5              	16.33%		
Bootstrap support for A8HRQ4 as seed ortholog is 100%.
Bootstrap support for Q4UCJ6 as seed ortholog is 100%.

Group of orthologs #645. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 T.annulata:120

A8JGN6              	100.00%		Q4UDE6              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for Q4UDE6 as seed ortholog is 100%.

Group of orthologs #646. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 T.annulata:119

A8I074              	100.00%		Q4UF84              	100.00%
Bootstrap support for A8I074 as seed ortholog is 100%.
Bootstrap support for Q4UF84 as seed ortholog is 100%.

Group of orthologs #647. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 T.annulata:66

A8IG64              	100.00%		Q4UIF7              	100.00%
Bootstrap support for A8IG64 as seed ortholog is 100%.
Bootstrap support for Q4UIF7 as seed ortholog is 99%.

Group of orthologs #648. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 T.annulata:119

A8J1W4              	100.00%		Q4UAM3              	100.00%
Bootstrap support for A8J1W4 as seed ortholog is 100%.
Bootstrap support for Q4UAM3 as seed ortholog is 100%.

Group of orthologs #649. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 T.annulata:119

A8JE85              	100.00%		Q4UCX8              	100.00%
Bootstrap support for A8JE85 as seed ortholog is 100%.
Bootstrap support for Q4UCX8 as seed ortholog is 100%.

Group of orthologs #650. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 T.annulata:119

A8JEP8              	100.00%		Q4UHI7              	100.00%
Bootstrap support for A8JEP8 as seed ortholog is 100%.
Bootstrap support for Q4UHI7 as seed ortholog is 100%.

Group of orthologs #651. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 T.annulata:118

A8HWY9              	100.00%		Q4UGP7              	100.00%
Bootstrap support for A8HWY9 as seed ortholog is 100%.
Bootstrap support for Q4UGP7 as seed ortholog is 100%.

Group of orthologs #652. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 T.annulata:118

Q6U9W9              	100.00%		Q4UJ17              	100.00%
Bootstrap support for Q6U9W9 as seed ortholog is 100%.
Bootstrap support for Q4UJ17 as seed ortholog is 100%.

Group of orthologs #653. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 T.annulata:117

A8HMA7              	100.00%		Q4UAM4              	100.00%
Bootstrap support for A8HMA7 as seed ortholog is 100%.
Bootstrap support for Q4UAM4 as seed ortholog is 100%.

Group of orthologs #654. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 T.annulata:117

A8HY08              	100.00%		Q4UC70              	100.00%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for Q4UC70 as seed ortholog is 100%.

Group of orthologs #655. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 T.annulata:117

A8IQT7              	100.00%		Q4UBP9              	100.00%
Bootstrap support for A8IQT7 as seed ortholog is 100%.
Bootstrap support for Q4UBP9 as seed ortholog is 100%.

Group of orthologs #656. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 T.annulata:117

A8JAC5              	100.00%		Q4UD04              	100.00%
Bootstrap support for A8JAC5 as seed ortholog is 100%.
Bootstrap support for Q4UD04 as seed ortholog is 100%.

Group of orthologs #657. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 T.annulata:116

A8J019              	100.00%		Q4U979              	100.00%
                    	       		Q4U978              	48.68%
Bootstrap support for A8J019 as seed ortholog is 53%.
Alternative seed ortholog is A8IYT3 (8 bits away from this cluster)
Bootstrap support for Q4U979 as seed ortholog is 100%.

Group of orthologs #658. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 T.annulata:116

A8HQI5              	100.00%		Q4U8T2              	100.00%
Bootstrap support for A8HQI5 as seed ortholog is 100%.
Bootstrap support for Q4U8T2 as seed ortholog is 100%.

Group of orthologs #659. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:37

A8HUN2              	100.00%		Q4U9S0              	100.00%
Bootstrap support for A8HUN2 as seed ortholog is 98%.
Bootstrap support for Q4U9S0 as seed ortholog is 98%.

Group of orthologs #660. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 T.annulata:116

A8I9Z4              	100.00%		Q4UC06              	100.00%
Bootstrap support for A8I9Z4 as seed ortholog is 100%.
Bootstrap support for Q4UC06 as seed ortholog is 100%.

Group of orthologs #661. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 T.annulata:116

A8I645              	100.00%		Q4UHZ0              	100.00%
Bootstrap support for A8I645 as seed ortholog is 100%.
Bootstrap support for Q4UHZ0 as seed ortholog is 100%.

Group of orthologs #662. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 T.annulata:116

A8J5G1              	100.00%		Q4UBC5              	100.00%
Bootstrap support for A8J5G1 as seed ortholog is 99%.
Bootstrap support for Q4UBC5 as seed ortholog is 100%.

Group of orthologs #663. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 T.annulata:116

A8JH45              	100.00%		Q4UGH5              	100.00%
Bootstrap support for A8JH45 as seed ortholog is 99%.
Bootstrap support for Q4UGH5 as seed ortholog is 100%.

Group of orthologs #664. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 T.annulata:115

A8IQC1              	100.00%		Q4UDE2              	100.00%
Bootstrap support for A8IQC1 as seed ortholog is 100%.
Bootstrap support for Q4UDE2 as seed ortholog is 100%.

Group of orthologs #665. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 T.annulata:115

A8J756              	100.00%		Q4UGP0              	100.00%
Bootstrap support for A8J756 as seed ortholog is 100%.
Bootstrap support for Q4UGP0 as seed ortholog is 100%.

Group of orthologs #666. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 T.annulata:114

A8IUX2              	100.00%		Q4UE45              	100.00%
A8JGU0              	6.51%		
Bootstrap support for A8IUX2 as seed ortholog is 70%.
Alternative seed ortholog is A8HWV7 (21 bits away from this cluster)
Bootstrap support for Q4UE45 as seed ortholog is 100%.

Group of orthologs #667. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 T.annulata:114

A8J576              	100.00%		Q4UD08              	100.00%
A8J0V6              	30.30%		
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for Q4UD08 as seed ortholog is 100%.

Group of orthologs #668. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 T.annulata:114

A8JI10              	100.00%		Q4UI49              	100.00%
Bootstrap support for A8JI10 as seed ortholog is 100%.
Bootstrap support for Q4UI49 as seed ortholog is 100%.

Group of orthologs #669. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 T.annulata:113

A8IV40              	100.00%		Q4UAN6              	100.00%
Q2HZ25              	17.93%		
Bootstrap support for A8IV40 as seed ortholog is 83%.
Bootstrap support for Q4UAN6 as seed ortholog is 100%.

Group of orthologs #670. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 T.annulata:113

A8IRW9              	100.00%		Q4UE21              	100.00%
A8IRW7              	23.55%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for Q4UE21 as seed ortholog is 100%.

Group of orthologs #671. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 T.annulata:113

A8HMD3              	100.00%		Q4U8S8              	100.00%
Bootstrap support for A8HMD3 as seed ortholog is 100%.
Bootstrap support for Q4U8S8 as seed ortholog is 100%.

Group of orthologs #672. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 T.annulata:113

A8HYK4              	100.00%		Q4UIW6              	100.00%
Bootstrap support for A8HYK4 as seed ortholog is 88%.
Bootstrap support for Q4UIW6 as seed ortholog is 100%.

Group of orthologs #673. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 T.annulata:113

A8IYP2              	100.00%		Q4UDZ1              	100.00%
Bootstrap support for A8IYP2 as seed ortholog is 100%.
Bootstrap support for Q4UDZ1 as seed ortholog is 100%.

Group of orthologs #674. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 T.annulata:113

A8JI94              	100.00%		Q4U9R9              	100.00%
Bootstrap support for A8JI94 as seed ortholog is 100%.
Bootstrap support for Q4U9R9 as seed ortholog is 100%.

Group of orthologs #675. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 T.annulata:21

A8JFP4              	100.00%		Q4UH42              	100.00%
Bootstrap support for A8JFP4 as seed ortholog is 100%.
Bootstrap support for Q4UH42 as seed ortholog is 64%.
Alternative seed ortholog is Q4UDY8 (21 bits away from this cluster)

Group of orthologs #676. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:112

A8I4N9              	100.00%		Q4UCH7              	100.00%
Bootstrap support for A8I4N9 as seed ortholog is 100%.
Bootstrap support for Q4UCH7 as seed ortholog is 100%.

Group of orthologs #677. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:112

A8I8V5              	100.00%		Q4UCT9              	100.00%
Bootstrap support for A8I8V5 as seed ortholog is 100%.
Bootstrap support for Q4UCT9 as seed ortholog is 100%.

Group of orthologs #678. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:112

A8J1L5              	100.00%		Q4UII0              	100.00%
Bootstrap support for A8J1L5 as seed ortholog is 100%.
Bootstrap support for Q4UII0 as seed ortholog is 100%.

Group of orthologs #679. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 T.annulata:112

A8JAY5              	100.00%		Q4UHU8              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for Q4UHU8 as seed ortholog is 100%.

Group of orthologs #680. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:111

A8HP90              	100.00%		Q4U9H6              	100.00%
Bootstrap support for A8HP90 as seed ortholog is 100%.
Bootstrap support for Q4U9H6 as seed ortholog is 100%.

Group of orthologs #681. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:111

A8HP50              	100.00%		Q4UEL9              	100.00%
Bootstrap support for A8HP50 as seed ortholog is 100%.
Bootstrap support for Q4UEL9 as seed ortholog is 100%.

Group of orthologs #682. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:111

A8IRR6              	100.00%		Q4UGX1              	100.00%
Bootstrap support for A8IRR6 as seed ortholog is 100%.
Bootstrap support for Q4UGX1 as seed ortholog is 100%.

Group of orthologs #683. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 T.annulata:5

A8J5Q5              	100.00%		Q4U8T0              	100.00%
Bootstrap support for A8J5Q5 as seed ortholog is 91%.
Bootstrap support for Q4U8T0 as seed ortholog is 59%.
Alternative seed ortholog is Q4UDI1 (5 bits away from this cluster)

Group of orthologs #684. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 T.annulata:49

A8J3X9              	100.00%		Q4UAD8              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 95%.
Bootstrap support for Q4UAD8 as seed ortholog is 94%.

Group of orthologs #685. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:111

A8J191              	100.00%		Q4UFC2              	100.00%
Bootstrap support for A8J191 as seed ortholog is 100%.
Bootstrap support for Q4UFC2 as seed ortholog is 100%.

Group of orthologs #686. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:111

A8JEE6              	100.00%		Q4U9C8              	100.00%
Bootstrap support for A8JEE6 as seed ortholog is 100%.
Bootstrap support for Q4U9C8 as seed ortholog is 100%.

Group of orthologs #687. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 T.annulata:111

A8JEC1              	100.00%		Q4UIY1              	100.00%
Bootstrap support for A8JEC1 as seed ortholog is 100%.
Bootstrap support for Q4UIY1 as seed ortholog is 100%.

Group of orthologs #688. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 T.annulata:110

A8HP79              	100.00%		Q4UES3              	100.00%
Bootstrap support for A8HP79 as seed ortholog is 100%.
Bootstrap support for Q4UES3 as seed ortholog is 100%.

Group of orthologs #689. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 T.annulata:110

A8JBG7              	100.00%		Q4UE26              	100.00%
Bootstrap support for A8JBG7 as seed ortholog is 100%.
Bootstrap support for Q4UE26 as seed ortholog is 100%.

Group of orthologs #690. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 T.annulata:109

A8JFV4              	100.00%		Q4UDA3              	100.00%
A8IZB3              	8.70%		
Bootstrap support for A8JFV4 as seed ortholog is 100%.
Bootstrap support for Q4UDA3 as seed ortholog is 100%.

Group of orthologs #691. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 T.annulata:109

A8I3Q0              	100.00%		Q4UAU5              	100.00%
Bootstrap support for A8I3Q0 as seed ortholog is 100%.
Bootstrap support for Q4UAU5 as seed ortholog is 100%.

Group of orthologs #692. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 T.annulata:21

A8IH75              	100.00%		Q4UI71              	100.00%
Bootstrap support for A8IH75 as seed ortholog is 56%.
Alternative seed ortholog is A8J8S4 (4 bits away from this cluster)
Bootstrap support for Q4UI71 as seed ortholog is 82%.

Group of orthologs #693. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 T.annulata:109

A8JC18              	100.00%		Q4U8H2              	100.00%
Bootstrap support for A8JC18 as seed ortholog is 100%.
Bootstrap support for Q4U8H2 as seed ortholog is 100%.

Group of orthologs #694. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 T.annulata:109

A8JG85              	100.00%		Q4U9Z1              	100.00%
Bootstrap support for A8JG85 as seed ortholog is 100%.
Bootstrap support for Q4U9Z1 as seed ortholog is 100%.

Group of orthologs #695. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 T.annulata:108

A8ITE5              	100.00%		Q4UAG9              	100.00%
                    	       		Q4UAG8              	32.10%
                    	       		Q4UAG7              	10.32%
Bootstrap support for A8ITE5 as seed ortholog is 100%.
Bootstrap support for Q4UAG9 as seed ortholog is 100%.

Group of orthologs #696. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 T.annulata:108

A8IUN8              	100.00%		Q4UFV9              	100.00%
Bootstrap support for A8IUN8 as seed ortholog is 100%.
Bootstrap support for Q4UFV9 as seed ortholog is 100%.

Group of orthologs #697. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 T.annulata:108

A8J2V4              	100.00%		Q4UHZ4              	100.00%
Bootstrap support for A8J2V4 as seed ortholog is 100%.
Bootstrap support for Q4UHZ4 as seed ortholog is 100%.

Group of orthologs #698. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 T.annulata:108

A8J2J5              	100.00%		Q4UID5              	100.00%
Bootstrap support for A8J2J5 as seed ortholog is 100%.
Bootstrap support for Q4UID5 as seed ortholog is 100%.

Group of orthologs #699. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 T.annulata:107

A8HZ87              	100.00%		Q4UEE7              	100.00%
Bootstrap support for A8HZ87 as seed ortholog is 100%.
Bootstrap support for Q4UEE7 as seed ortholog is 100%.

Group of orthologs #700. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 T.annulata:107

A8IY22              	100.00%		Q4U913              	100.00%
Bootstrap support for A8IY22 as seed ortholog is 93%.
Bootstrap support for Q4U913 as seed ortholog is 100%.

Group of orthologs #701. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:106

A8IDT8              	100.00%		Q4UH41              	100.00%
A8J2I0              	8.28%		
Bootstrap support for A8IDT8 as seed ortholog is 100%.
Bootstrap support for Q4UH41 as seed ortholog is 100%.

Group of orthologs #702. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:106

A8J9U3              	100.00%		Q4UF21              	100.00%
A8JC80              	17.70%		
Bootstrap support for A8J9U3 as seed ortholog is 100%.
Bootstrap support for Q4UF21 as seed ortholog is 100%.

Group of orthologs #703. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:106

A8HVK4              	100.00%		Q4U8U0              	100.00%
Bootstrap support for A8HVK4 as seed ortholog is 100%.
Bootstrap support for Q4U8U0 as seed ortholog is 100%.

Group of orthologs #704. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:106

A8HX47              	100.00%		Q4UC21              	100.00%
Bootstrap support for A8HX47 as seed ortholog is 100%.
Bootstrap support for Q4UC21 as seed ortholog is 100%.

Group of orthologs #705. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:106

A8IW47              	100.00%		Q4UAV0              	100.00%
Bootstrap support for A8IW47 as seed ortholog is 100%.
Bootstrap support for Q4UAV0 as seed ortholog is 100%.

Group of orthologs #706. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 T.annulata:106

A8IXU5              	100.00%		Q4UEK0              	100.00%
Bootstrap support for A8IXU5 as seed ortholog is 100%.
Bootstrap support for Q4UEK0 as seed ortholog is 100%.

Group of orthologs #707. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 T.annulata:105

A8I7Y8              	100.00%		Q4UDQ4              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for Q4UDQ4 as seed ortholog is 100%.

Group of orthologs #708. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 T.annulata:105

A8IWQ2              	100.00%		Q4UA57              	100.00%
Bootstrap support for A8IWQ2 as seed ortholog is 100%.
Bootstrap support for Q4UA57 as seed ortholog is 100%.

Group of orthologs #709. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 T.annulata:105

A8IYZ2              	100.00%		Q4UC53              	100.00%
Bootstrap support for A8IYZ2 as seed ortholog is 100%.
Bootstrap support for Q4UC53 as seed ortholog is 100%.

Group of orthologs #710. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 T.annulata:104

A8I403              	100.00%		Q4UB68              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for Q4UB68 as seed ortholog is 100%.

Group of orthologs #711. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 T.annulata:104

A8IP53              	100.00%		Q4UAG0              	100.00%
Bootstrap support for A8IP53 as seed ortholog is 100%.
Bootstrap support for Q4UAG0 as seed ortholog is 100%.

Group of orthologs #712. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 T.annulata:104

A8JAR5              	100.00%		Q4UA14              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for Q4UA14 as seed ortholog is 100%.

Group of orthologs #713. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 T.annulata:104

A8JHW6              	100.00%		Q4U948              	100.00%
Bootstrap support for A8JHW6 as seed ortholog is 100%.
Bootstrap support for Q4U948 as seed ortholog is 100%.

Group of orthologs #714. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 T.annulata:103

A8IDI5              	100.00%		Q4UBV2              	100.00%
Bootstrap support for A8IDI5 as seed ortholog is 100%.
Bootstrap support for Q4UBV2 as seed ortholog is 100%.

Group of orthologs #715. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 T.annulata:103

A8IYQ8              	100.00%		Q4UBB4              	100.00%
Bootstrap support for A8IYQ8 as seed ortholog is 100%.
Bootstrap support for Q4UBB4 as seed ortholog is 100%.

Group of orthologs #716. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 T.annulata:103

A8J266              	100.00%		Q4U8W4              	100.00%
Bootstrap support for A8J266 as seed ortholog is 100%.
Bootstrap support for Q4U8W4 as seed ortholog is 100%.

Group of orthologs #717. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 T.annulata:102

A8I0E2              	100.00%		Q4U9V3              	100.00%
Bootstrap support for A8I0E2 as seed ortholog is 100%.
Bootstrap support for Q4U9V3 as seed ortholog is 100%.

Group of orthologs #718. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 T.annulata:102

A8ITP7              	100.00%		Q4U9S8              	100.00%
Bootstrap support for A8ITP7 as seed ortholog is 100%.
Bootstrap support for Q4U9S8 as seed ortholog is 100%.

Group of orthologs #719. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 T.annulata:102

A8I9R7              	100.00%		Q4UH62              	100.00%
Bootstrap support for A8I9R7 as seed ortholog is 100%.
Bootstrap support for Q4UH62 as seed ortholog is 100%.

Group of orthologs #720. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 T.annulata:57

A8ITP1              	100.00%		Q4UA29              	100.00%
Bootstrap support for A8ITP1 as seed ortholog is 100%.
Bootstrap support for Q4UA29 as seed ortholog is 92%.

Group of orthologs #721. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 T.annulata:59

A8IE44              	100.00%		Q4UFY0              	100.00%
Bootstrap support for A8IE44 as seed ortholog is 88%.
Bootstrap support for Q4UFY0 as seed ortholog is 96%.

Group of orthologs #722. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 T.annulata:102

A8J2V3              	100.00%		Q4UA50              	100.00%
Bootstrap support for A8J2V3 as seed ortholog is 100%.
Bootstrap support for Q4UA50 as seed ortholog is 100%.

Group of orthologs #723. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 T.annulata:102

A8J1C2              	100.00%		Q4UH96              	100.00%
Bootstrap support for A8J1C2 as seed ortholog is 100%.
Bootstrap support for Q4UH96 as seed ortholog is 100%.

Group of orthologs #724. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:101

A8HM37              	100.00%		Q4UH81              	100.00%
A8HYH9              	24.19%		Q4UH80              	18.05%
Bootstrap support for A8HM37 as seed ortholog is 100%.
Bootstrap support for Q4UH81 as seed ortholog is 100%.

Group of orthologs #725. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 T.annulata:101

A8IX73              	100.00%		Q4UD00              	100.00%
                    	       		Q4UCZ9              	93.35%
                    	       		Q4UIR3              	60.34%
Bootstrap support for A8IX73 as seed ortholog is 83%.
Bootstrap support for Q4UD00 as seed ortholog is 100%.

Group of orthologs #726. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:101

A8J6G9              	100.00%		Q4UHX9              	100.00%
A8ICE4              	10.78%		
Bootstrap support for A8J6G9 as seed ortholog is 100%.
Bootstrap support for Q4UHX9 as seed ortholog is 100%.

Group of orthologs #727. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:101

A8IWJ3              	100.00%		Q4UH30              	100.00%
Bootstrap support for A8IWJ3 as seed ortholog is 100%.
Bootstrap support for Q4UH30 as seed ortholog is 100%.

Group of orthologs #728. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:101

A8JCC6              	100.00%		Q4U8Y0              	100.00%
Bootstrap support for A8JCC6 as seed ortholog is 100%.
Bootstrap support for Q4U8Y0 as seed ortholog is 100%.

Group of orthologs #729. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 T.annulata:101

Q00471              	100.00%		Q4UJ67              	100.00%
Bootstrap support for Q00471 as seed ortholog is 100%.
Bootstrap support for Q4UJ67 as seed ortholog is 100%.

Group of orthologs #730. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 T.annulata:100

A8HQM1              	100.00%		Q4UIY0              	100.00%
A8HXL0              	7.18%		
Bootstrap support for A8HQM1 as seed ortholog is 100%.
Bootstrap support for Q4UIY0 as seed ortholog is 100%.

Group of orthologs #731. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 T.annulata:100

A8HR57              	100.00%		Q4UDT5              	100.00%
Bootstrap support for A8HR57 as seed ortholog is 100%.
Bootstrap support for Q4UDT5 as seed ortholog is 100%.

Group of orthologs #732. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 T.annulata:100

A8IHQ7              	100.00%		Q4UCG2              	100.00%
Bootstrap support for A8IHQ7 as seed ortholog is 100%.
Bootstrap support for Q4UCG2 as seed ortholog is 100%.

Group of orthologs #733. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 T.annulata:100

A8JCT0              	100.00%		Q4UFQ1              	100.00%
Bootstrap support for A8JCT0 as seed ortholog is 100%.
Bootstrap support for Q4UFQ1 as seed ortholog is 100%.

Group of orthologs #734. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 T.annulata:3

A8IW43              	100.00%		Q4U989              	100.00%
A8I7H0              	21.31%		
A8JHY5              	18.93%		
Bootstrap support for A8IW43 as seed ortholog is 100%.
Bootstrap support for Q4U989 as seed ortholog is 50%.
Alternative seed ortholog is Q4UBB6 (3 bits away from this cluster)

Group of orthologs #735. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 T.annulata:99

A8J275              	100.00%		Q4UGX4              	100.00%
Bootstrap support for A8J275 as seed ortholog is 100%.
Bootstrap support for Q4UGX4 as seed ortholog is 100%.

Group of orthologs #736. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 T.annulata:98

A8IQZ3              	100.00%		Q4UCG1              	100.00%
Bootstrap support for A8IQZ3 as seed ortholog is 100%.
Bootstrap support for Q4UCG1 as seed ortholog is 100%.

Group of orthologs #737. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 T.annulata:98

A8J4Q3              	100.00%		Q4U8L1              	100.00%
Bootstrap support for A8J4Q3 as seed ortholog is 100%.
Bootstrap support for Q4U8L1 as seed ortholog is 100%.

Group of orthologs #738. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 T.annulata:98

A8J834              	100.00%		Q4UGV6              	100.00%
Bootstrap support for A8J834 as seed ortholog is 100%.
Bootstrap support for Q4UGV6 as seed ortholog is 100%.

Group of orthologs #739. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 T.annulata:97

A8J888              	100.00%		Q4U8R8              	100.00%
Bootstrap support for A8J888 as seed ortholog is 100%.
Bootstrap support for Q4U8R8 as seed ortholog is 100%.

Group of orthologs #740. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 T.annulata:97

A8J7N7              	100.00%		Q4UAV9              	100.00%
Bootstrap support for A8J7N7 as seed ortholog is 100%.
Bootstrap support for Q4UAV9 as seed ortholog is 100%.

Group of orthologs #741. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 T.annulata:96

A8HR60              	100.00%		Q4UC97              	100.00%
Bootstrap support for A8HR60 as seed ortholog is 93%.
Bootstrap support for Q4UC97 as seed ortholog is 100%.

Group of orthologs #742. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 T.annulata:96

A8HYN9              	100.00%		Q4UBR6              	100.00%
Bootstrap support for A8HYN9 as seed ortholog is 100%.
Bootstrap support for Q4UBR6 as seed ortholog is 100%.

Group of orthologs #743. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 T.annulata:96

A8HNX3              	100.00%		Q4UIF8              	100.00%
Bootstrap support for A8HNX3 as seed ortholog is 100%.
Bootstrap support for Q4UIF8 as seed ortholog is 100%.

Group of orthologs #744. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 T.annulata:96

A8IZD4              	100.00%		Q4UFB9              	100.00%
Bootstrap support for A8IZD4 as seed ortholog is 100%.
Bootstrap support for Q4UFB9 as seed ortholog is 100%.

Group of orthologs #745. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 T.annulata:96

A8JGE8              	100.00%		Q4UHG6              	100.00%
Bootstrap support for A8JGE8 as seed ortholog is 100%.
Bootstrap support for Q4UHG6 as seed ortholog is 100%.

Group of orthologs #746. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 T.annulata:95

A8INM9              	100.00%		Q4UCA6              	100.00%
                    	       		Q4UCA2              	59.13%
                    	       		Q4UCA4              	56.33%
                    	       		Q4UCA5              	52.84%
                    	       		Q4UCA1              	50.66%
                    	       		Q4UCA0              	48.82%
Bootstrap support for A8INM9 as seed ortholog is 100%.
Bootstrap support for Q4UCA6 as seed ortholog is 100%.

Group of orthologs #747. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 T.annulata:95

A8J3A8              	100.00%		Q4UIN2              	100.00%
A8J3A7              	47.47%		
Bootstrap support for A8J3A8 as seed ortholog is 91%.
Bootstrap support for Q4UIN2 as seed ortholog is 100%.

Group of orthologs #748. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 T.annulata:95

A8I1C7              	100.00%		Q4U960              	100.00%
Bootstrap support for A8I1C7 as seed ortholog is 100%.
Bootstrap support for Q4U960 as seed ortholog is 100%.

Group of orthologs #749. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 T.annulata:95

A8J344              	100.00%		Q4UC98              	100.00%
Bootstrap support for A8J344 as seed ortholog is 100%.
Bootstrap support for Q4UC98 as seed ortholog is 100%.

Group of orthologs #750. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 T.annulata:95

A8JES1              	100.00%		Q4UIE1              	100.00%
Bootstrap support for A8JES1 as seed ortholog is 93%.
Bootstrap support for Q4UIE1 as seed ortholog is 100%.

Group of orthologs #751. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8HQE3              	100.00%		Q4UAH0              	100.00%
Bootstrap support for A8HQE3 as seed ortholog is 100%.
Bootstrap support for Q4UAH0 as seed ortholog is 100%.

Group of orthologs #752. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8HPM9              	100.00%		Q4UB72              	100.00%
Bootstrap support for A8HPM9 as seed ortholog is 100%.
Bootstrap support for Q4UB72 as seed ortholog is 100%.

Group of orthologs #753. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8HXD3              	100.00%		Q4UIB9              	100.00%
Bootstrap support for A8HXD3 as seed ortholog is 100%.
Bootstrap support for Q4UIB9 as seed ortholog is 100%.

Group of orthologs #754. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8HXD0              	100.00%		Q4UIL5              	100.00%
Bootstrap support for A8HXD0 as seed ortholog is 100%.
Bootstrap support for Q4UIL5 as seed ortholog is 100%.

Group of orthologs #755. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8HXN9              	100.00%		Q4UIJ5              	100.00%
Bootstrap support for A8HXN9 as seed ortholog is 100%.
Bootstrap support for Q4UIJ5 as seed ortholog is 100%.

Group of orthologs #756. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8IV17              	100.00%		Q4UEI4              	100.00%
Bootstrap support for A8IV17 as seed ortholog is 100%.
Bootstrap support for Q4UEI4 as seed ortholog is 100%.

Group of orthologs #757. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8J8R7              	100.00%		Q4UDG7              	100.00%
Bootstrap support for A8J8R7 as seed ortholog is 100%.
Bootstrap support for Q4UDG7 as seed ortholog is 100%.

Group of orthologs #758. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8J810              	100.00%		Q4UGV0              	100.00%
Bootstrap support for A8J810 as seed ortholog is 100%.
Bootstrap support for Q4UGV0 as seed ortholog is 100%.

Group of orthologs #759. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 T.annulata:94

A8JHU2              	100.00%		Q4UA67              	100.00%
Bootstrap support for A8JHU2 as seed ortholog is 100%.
Bootstrap support for Q4UA67 as seed ortholog is 100%.

Group of orthologs #760. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 T.annulata:92

A8I5Y2              	100.00%		Q4UGP6              	100.00%
Bootstrap support for A8I5Y2 as seed ortholog is 100%.
Bootstrap support for Q4UGP6 as seed ortholog is 100%.

Group of orthologs #761. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 T.annulata:92

A8J1F9              	100.00%		Q4UAI3              	100.00%
Bootstrap support for A8J1F9 as seed ortholog is 100%.
Bootstrap support for Q4UAI3 as seed ortholog is 100%.

Group of orthologs #762. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 T.annulata:92

Q546J6              	100.00%		Q4UAA8              	100.00%
Bootstrap support for Q546J6 as seed ortholog is 100%.
Bootstrap support for Q4UAA8 as seed ortholog is 100%.

Group of orthologs #763. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 T.annulata:31

A8JFH5              	100.00%		Q4UH26              	100.00%
Bootstrap support for A8JFH5 as seed ortholog is 94%.
Bootstrap support for Q4UH26 as seed ortholog is 88%.

Group of orthologs #764. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 T.annulata:91

A8HNI9              	100.00%		Q4UBA5              	100.00%
A8HQ73              	23.94%		
Bootstrap support for A8HNI9 as seed ortholog is 100%.
Bootstrap support for Q4UBA5 as seed ortholog is 100%.

Group of orthologs #765. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 T.annulata:91

A8I5B9              	100.00%		Q4UFG9              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for Q4UFG9 as seed ortholog is 100%.

Group of orthologs #766. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 T.annulata:91

A8ICB0              	100.00%		Q4UIN7              	100.00%
Bootstrap support for A8ICB0 as seed ortholog is 100%.
Bootstrap support for Q4UIN7 as seed ortholog is 100%.

Group of orthologs #767. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 T.annulata:91

A8J3W3              	100.00%		Q4UGX5              	100.00%
Bootstrap support for A8J3W3 as seed ortholog is 68%.
Alternative seed ortholog is A8J3U2 (32 bits away from this cluster)
Bootstrap support for Q4UGX5 as seed ortholog is 100%.

Group of orthologs #768. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 T.annulata:91

A8JH05              	100.00%		Q4UDP5              	100.00%
Bootstrap support for A8JH05 as seed ortholog is 100%.
Bootstrap support for Q4UDP5 as seed ortholog is 100%.

Group of orthologs #769. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 T.annulata:89

A8IRC0              	100.00%		Q4UAN9              	100.00%
Bootstrap support for A8IRC0 as seed ortholog is 100%.
Bootstrap support for Q4UAN9 as seed ortholog is 100%.

Group of orthologs #770. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 T.annulata:89

A8ITI8              	100.00%		Q4UCH9              	100.00%
Bootstrap support for A8ITI8 as seed ortholog is 100%.
Bootstrap support for Q4UCH9 as seed ortholog is 100%.

Group of orthologs #771. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 T.annulata:89

A8J426              	100.00%		Q4UB96              	100.00%
Bootstrap support for A8J426 as seed ortholog is 100%.
Bootstrap support for Q4UB96 as seed ortholog is 100%.

Group of orthologs #772. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 T.annulata:88

A8IM89              	100.00%		Q4UDQ3              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for Q4UDQ3 as seed ortholog is 100%.

Group of orthologs #773. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 T.annulata:88

A8J6I6              	100.00%		Q4UC31              	100.00%
Bootstrap support for A8J6I6 as seed ortholog is 100%.
Bootstrap support for Q4UC31 as seed ortholog is 100%.

Group of orthologs #774. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 T.annulata:87

A8HMR2              	100.00%		Q4UIR1              	100.00%
A8JD31              	7.40%		
Bootstrap support for A8HMR2 as seed ortholog is 93%.
Bootstrap support for Q4UIR1 as seed ortholog is 100%.

Group of orthologs #775. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 T.annulata:87

A8IIA2              	100.00%		Q4UA02              	100.00%
Bootstrap support for A8IIA2 as seed ortholog is 100%.
Bootstrap support for Q4UA02 as seed ortholog is 100%.

Group of orthologs #776. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 T.annulata:87

A8J8P4              	100.00%		Q4UBU1              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for Q4UBU1 as seed ortholog is 100%.

Group of orthologs #777. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 T.annulata:86

A8HM72              	100.00%		Q4U9B2              	100.00%
Bootstrap support for A8HM72 as seed ortholog is 100%.
Bootstrap support for Q4U9B2 as seed ortholog is 100%.

Group of orthologs #778. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 T.annulata:86

A2PZD3              	100.00%		Q4UC71              	100.00%
Bootstrap support for A2PZD3 as seed ortholog is 100%.
Bootstrap support for Q4UC71 as seed ortholog is 100%.

Group of orthologs #779. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 T.annulata:86

A8IWT7              	100.00%		Q4U9K2              	100.00%
Bootstrap support for A8IWT7 as seed ortholog is 100%.
Bootstrap support for Q4U9K2 as seed ortholog is 100%.

Group of orthologs #780. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 T.annulata:86

A8IMS6              	100.00%		Q4UIS8              	100.00%
Bootstrap support for A8IMS6 as seed ortholog is 100%.
Bootstrap support for Q4UIS8 as seed ortholog is 100%.

Group of orthologs #781. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 T.annulata:86

A8JDG4              	100.00%		Q4UBA9              	100.00%
Bootstrap support for A8JDG4 as seed ortholog is 79%.
Bootstrap support for Q4UBA9 as seed ortholog is 100%.

Group of orthologs #782. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 T.annulata:86

A8J8R6              	100.00%		Q4UFY4              	100.00%
Bootstrap support for A8J8R6 as seed ortholog is 100%.
Bootstrap support for Q4UFY4 as seed ortholog is 100%.

Group of orthologs #783. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 T.annulata:85

A8J4E1              	100.00%		Q4UAA4              	100.00%
A8HPK0              	22.58%		
A8HZ69              	15.05%		
Bootstrap support for A8J4E1 as seed ortholog is 100%.
Bootstrap support for Q4UAA4 as seed ortholog is 100%.

Group of orthologs #784. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 T.annulata:85

A8I8Z4              	100.00%		Q4UIW5              	100.00%
A8J987              	10.62%		
Bootstrap support for A8I8Z4 as seed ortholog is 100%.
Bootstrap support for Q4UIW5 as seed ortholog is 100%.

Group of orthologs #785. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 T.annulata:85

A8IYC8              	100.00%		Q4UF25              	100.00%
Bootstrap support for A8IYC8 as seed ortholog is 100%.
Bootstrap support for Q4UF25 as seed ortholog is 100%.

Group of orthologs #786. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8IJF1              	100.00%		Q4UEJ9              	100.00%
A8I469              	7.93%		
Bootstrap support for A8IJF1 as seed ortholog is 100%.
Bootstrap support for Q4UEJ9 as seed ortholog is 100%.

Group of orthologs #787. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8IIS4              	100.00%		Q4UF48              	100.00%
A8IZB7              	13.45%		
Bootstrap support for A8IIS4 as seed ortholog is 100%.
Bootstrap support for Q4UF48 as seed ortholog is 100%.

Group of orthologs #788. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8JHA9              	100.00%		Q4UGQ5              	100.00%
A8IYH1              	41.21%		
Bootstrap support for A8JHA9 as seed ortholog is 100%.
Bootstrap support for Q4UGQ5 as seed ortholog is 100%.

Group of orthologs #789. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8I9X5              	100.00%		Q4U9W8              	100.00%
Bootstrap support for A8I9X5 as seed ortholog is 100%.
Bootstrap support for Q4U9W8 as seed ortholog is 100%.

Group of orthologs #790. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8ICE1              	100.00%		Q4UDP6              	100.00%
Bootstrap support for A8ICE1 as seed ortholog is 100%.
Bootstrap support for Q4UDP6 as seed ortholog is 100%.

Group of orthologs #791. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8IKP1              	100.00%		Q4UC12              	100.00%
Bootstrap support for A8IKP1 as seed ortholog is 100%.
Bootstrap support for Q4UC12 as seed ortholog is 100%.

Group of orthologs #792. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8ITV1              	100.00%		Q4UD11              	100.00%
Bootstrap support for A8ITV1 as seed ortholog is 100%.
Bootstrap support for Q4UD11 as seed ortholog is 100%.

Group of orthologs #793. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8J1A3              	100.00%		Q4UD10              	100.00%
Bootstrap support for A8J1A3 as seed ortholog is 100%.
Bootstrap support for Q4UD10 as seed ortholog is 100%.

Group of orthologs #794. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8J0R4              	100.00%		Q4UE75              	100.00%
Bootstrap support for A8J0R4 as seed ortholog is 100%.
Bootstrap support for Q4UE75 as seed ortholog is 100%.

Group of orthologs #795. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8IZY5              	100.00%		Q4UF70              	100.00%
Bootstrap support for A8IZY5 as seed ortholog is 100%.
Bootstrap support for Q4UF70 as seed ortholog is 100%.

Group of orthologs #796. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8JGX7              	100.00%		Q4UD33              	100.00%
Bootstrap support for A8JGX7 as seed ortholog is 100%.
Bootstrap support for Q4UD33 as seed ortholog is 100%.

Group of orthologs #797. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 T.annulata:84

A8JGS4              	100.00%		Q4UG27              	100.00%
Bootstrap support for A8JGS4 as seed ortholog is 100%.
Bootstrap support for Q4UG27 as seed ortholog is 100%.

Group of orthologs #798. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:83

A8IA96              	100.00%		Q4U9B0              	100.00%
Bootstrap support for A8IA96 as seed ortholog is 100%.
Bootstrap support for Q4U9B0 as seed ortholog is 100%.

Group of orthologs #799. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:83

A8I3M4              	100.00%		Q4UD42              	100.00%
Bootstrap support for A8I3M4 as seed ortholog is 100%.
Bootstrap support for Q4UD42 as seed ortholog is 100%.

Group of orthologs #800. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:83

A8J9X6              	100.00%		Q4UCW5              	100.00%
Bootstrap support for A8J9X6 as seed ortholog is 100%.
Bootstrap support for Q4UCW5 as seed ortholog is 100%.

Group of orthologs #801. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 T.annulata:83

A8JBX6              	100.00%		Q4UDF4              	100.00%
Bootstrap support for A8JBX6 as seed ortholog is 100%.
Bootstrap support for Q4UDF4 as seed ortholog is 100%.

Group of orthologs #802. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 T.annulata:82

A8HZP7              	100.00%		Q4U9Y7              	100.00%
Bootstrap support for A8HZP7 as seed ortholog is 100%.
Bootstrap support for Q4U9Y7 as seed ortholog is 100%.

Group of orthologs #803. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 T.annulata:82

A8HSI6              	100.00%		Q4UE14              	100.00%
Bootstrap support for A8HSI6 as seed ortholog is 100%.
Bootstrap support for Q4UE14 as seed ortholog is 100%.

Group of orthologs #804. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 T.annulata:82

A8IXG3              	100.00%		Q4U8V7              	100.00%
Bootstrap support for A8IXG3 as seed ortholog is 100%.
Bootstrap support for Q4U8V7 as seed ortholog is 100%.

Group of orthologs #805. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 T.annulata:10

A8JBW4              	100.00%		Q4UG24              	100.00%
A8J0N4              	26.02%		
A8J587              	11.46%		
A8JIA5              	5.24%		
Bootstrap support for A8JBW4 as seed ortholog is 57%.
Alternative seed ortholog is A8JBD8 (6 bits away from this cluster)
Bootstrap support for Q4UG24 as seed ortholog is 59%.
Alternative seed ortholog is Q4U9Q3 (10 bits away from this cluster)

Group of orthologs #806. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 T.annulata:81

A8IFM6              	100.00%		Q4UB53              	100.00%
Bootstrap support for A8IFM6 as seed ortholog is 100%.
Bootstrap support for Q4UB53 as seed ortholog is 100%.

Group of orthologs #807. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 T.annulata:81

A8I8E3              	100.00%		Q4UGG8              	100.00%
Bootstrap support for A8I8E3 as seed ortholog is 100%.
Bootstrap support for Q4UGG8 as seed ortholog is 100%.

Group of orthologs #808. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 T.annulata:28

A8J0N9              	100.00%		Q4UEZ5              	100.00%
Bootstrap support for A8J0N9 as seed ortholog is 62%.
Alternative seed ortholog is A8JFM7 (7 bits away from this cluster)
Bootstrap support for Q4UEZ5 as seed ortholog is 76%.

Group of orthologs #809. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:80

A8J775              	100.00%		Q4UBW1              	100.00%
A8HXE1              	16.15%		
Bootstrap support for A8J775 as seed ortholog is 100%.
Bootstrap support for Q4UBW1 as seed ortholog is 100%.

Group of orthologs #810. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:80

A8HNP9              	100.00%		Q4UCX5              	100.00%
Bootstrap support for A8HNP9 as seed ortholog is 100%.
Bootstrap support for Q4UCX5 as seed ortholog is 100%.

Group of orthologs #811. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:80

A8I7E4              	100.00%		Q4UCC8              	100.00%
Bootstrap support for A8I7E4 as seed ortholog is 100%.
Bootstrap support for Q4UCC8 as seed ortholog is 100%.

Group of orthologs #812. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 T.annulata:80

A8JIE5              	100.00%		Q4UDS8              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for Q4UDS8 as seed ortholog is 100%.

Group of orthologs #813. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 T.annulata:79

A8HNL1              	100.00%		Q4UE96              	100.00%
Bootstrap support for A8HNL1 as seed ortholog is 100%.
Bootstrap support for Q4UE96 as seed ortholog is 100%.

Group of orthologs #814. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 T.annulata:79

A8HUY7              	100.00%		Q4UDT3              	100.00%
Bootstrap support for A8HUY7 as seed ortholog is 100%.
Bootstrap support for Q4UDT3 as seed ortholog is 100%.

Group of orthologs #815. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 T.annulata:79

A8IUM9              	100.00%		Q4UDQ8              	100.00%
Bootstrap support for A8IUM9 as seed ortholog is 100%.
Bootstrap support for Q4UDQ8 as seed ortholog is 100%.

Group of orthologs #816. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 T.annulata:7

A8JB67              	100.00%		Q4UAB9              	100.00%
Bootstrap support for A8JB67 as seed ortholog is 100%.
Bootstrap support for Q4UAB9 as seed ortholog is 64%.
Alternative seed ortholog is Q4U8G5 (7 bits away from this cluster)

Group of orthologs #817. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:78

A8IT96              	100.00%		Q4UCD1              	100.00%
                    	       		Q4UHM4              	25.38%
                    	       		Q4UHM9              	13.07%
Bootstrap support for A8IT96 as seed ortholog is 100%.
Bootstrap support for Q4UCD1 as seed ortholog is 100%.

Group of orthologs #818. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:78

A8J7V2              	100.00%		Q4UE99              	100.00%
A8J6Q2              	9.88%		
Bootstrap support for A8J7V2 as seed ortholog is 100%.
Bootstrap support for Q4UE99 as seed ortholog is 100%.

Group of orthologs #819. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:37

A8IR43              	100.00%		Q4U8N5              	100.00%
Bootstrap support for A8IR43 as seed ortholog is 100%.
Bootstrap support for Q4U8N5 as seed ortholog is 80%.

Group of orthologs #820. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:78

A8J4Z8              	100.00%		Q4UEB7              	100.00%
Bootstrap support for A8J4Z8 as seed ortholog is 100%.
Bootstrap support for Q4UEB7 as seed ortholog is 100%.

Group of orthologs #821. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:78

A8J591              	100.00%		Q4UF41              	100.00%
Bootstrap support for A8J591 as seed ortholog is 100%.
Bootstrap support for Q4UF41 as seed ortholog is 100%.

Group of orthologs #822. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:78

A8JB85              	100.00%		Q4UE40              	100.00%
Bootstrap support for A8JB85 as seed ortholog is 100%.
Bootstrap support for Q4UE40 as seed ortholog is 100%.

Group of orthologs #823. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 T.annulata:78

A8JBU3              	100.00%		Q4UHC9              	100.00%
Bootstrap support for A8JBU3 as seed ortholog is 100%.
Bootstrap support for Q4UHC9 as seed ortholog is 100%.

Group of orthologs #824. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 T.annulata:77

A8I4N7              	100.00%		Q4U9E5              	100.00%
Bootstrap support for A8I4N7 as seed ortholog is 100%.
Bootstrap support for Q4U9E5 as seed ortholog is 100%.

Group of orthologs #825. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 T.annulata:77

A8IR87              	100.00%		Q4UD14              	100.00%
Bootstrap support for A8IR87 as seed ortholog is 100%.
Bootstrap support for Q4UD14 as seed ortholog is 100%.

Group of orthologs #826. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 T.annulata:77

A8J2L7              	100.00%		Q4UII3              	100.00%
Bootstrap support for A8J2L7 as seed ortholog is 100%.
Bootstrap support for Q4UII3 as seed ortholog is 100%.

Group of orthologs #827. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 T.annulata:77

A8J760              	100.00%		Q4UGH9              	100.00%
Bootstrap support for A8J760 as seed ortholog is 100%.
Bootstrap support for Q4UGH9 as seed ortholog is 100%.

Group of orthologs #828. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 T.annulata:76

A8I1D3              	100.00%		Q4UG26              	100.00%
Bootstrap support for A8I1D3 as seed ortholog is 100%.
Bootstrap support for Q4UG26 as seed ortholog is 100%.

Group of orthologs #829. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 T.annulata:76

A8IC48              	100.00%		Q4UFJ1              	100.00%
Bootstrap support for A8IC48 as seed ortholog is 100%.
Bootstrap support for Q4UFJ1 as seed ortholog is 100%.

Group of orthologs #830. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 T.annulata:76

A8J3R5              	100.00%		Q4UE69              	100.00%
Bootstrap support for A8J3R5 as seed ortholog is 100%.
Bootstrap support for Q4UE69 as seed ortholog is 100%.

Group of orthologs #831. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 T.annulata:76

A8JD59              	100.00%		Q4U9K3              	100.00%
Bootstrap support for A8JD59 as seed ortholog is 100%.
Bootstrap support for Q4U9K3 as seed ortholog is 100%.

Group of orthologs #832. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 T.annulata:76

A8JDK0              	100.00%		Q4UA37              	100.00%
Bootstrap support for A8JDK0 as seed ortholog is 100%.
Bootstrap support for Q4UA37 as seed ortholog is 100%.

Group of orthologs #833. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 T.annulata:19

A8JG35              	100.00%		Q4UGG6              	100.00%
Bootstrap support for A8JG35 as seed ortholog is 77%.
Bootstrap support for Q4UGG6 as seed ortholog is 83%.

Group of orthologs #834. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 T.annulata:75

A8I5J0              	100.00%		Q4UH61              	100.00%
A8JHJ0              	32.04%		
A8J8T0              	25.51%		
A8JC79              	23.67%		
A8HZN7              	23.67%		
A8JAC8              	9.39%		
A8JGU6              	7.96%		
A8I5T2              	7.14%		
Q84QJ2              	5.92%		
A8JI01              	5.92%		
A8HSW2              	5.10%		
Bootstrap support for A8I5J0 as seed ortholog is 100%.
Bootstrap support for Q4UH61 as seed ortholog is 100%.

Group of orthologs #835. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 T.annulata:75

A8HM85              	100.00%		Q4UHL2              	100.00%
A8HM68              	38.78%		
A8HM71              	10.66%		
A8J1A7              	5.15%		
Q6UPR1              	5.07%		
Bootstrap support for A8HM85 as seed ortholog is 100%.
Bootstrap support for Q4UHL2 as seed ortholog is 100%.

Group of orthologs #836. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 T.annulata:75

P93106              	100.00%		Q4UJ29              	100.00%
A8JHU0              	47.21%		
Bootstrap support for P93106 as seed ortholog is 100%.
Bootstrap support for Q4UJ29 as seed ortholog is 100%.

Group of orthologs #837. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 T.annulata:75

A8HMV2              	100.00%		Q4U8L0              	100.00%
Bootstrap support for A8HMV2 as seed ortholog is 100%.
Bootstrap support for Q4U8L0 as seed ortholog is 100%.

Group of orthologs #838. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 T.annulata:74

A8HN61              	100.00%		Q4UE74              	100.00%
Bootstrap support for A8HN61 as seed ortholog is 100%.
Bootstrap support for Q4UE74 as seed ortholog is 100%.

Group of orthologs #839. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 T.annulata:74

A8IKY9              	100.00%		Q4U8Q3              	100.00%
Bootstrap support for A8IKY9 as seed ortholog is 100%.
Bootstrap support for Q4U8Q3 as seed ortholog is 100%.

Group of orthologs #840. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 T.annulata:74

A8IQE3              	100.00%		Q4UHK9              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for Q4UHK9 as seed ortholog is 100%.

Group of orthologs #841. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 T.annulata:74

A8J2F0              	100.00%		Q4UGS2              	100.00%
Bootstrap support for A8J2F0 as seed ortholog is 88%.
Bootstrap support for Q4UGS2 as seed ortholog is 100%.

Group of orthologs #842. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 T.annulata:74

A8J8A6              	100.00%		Q4UHK4              	100.00%
Bootstrap support for A8J8A6 as seed ortholog is 100%.
Bootstrap support for Q4UHK4 as seed ortholog is 100%.

Group of orthologs #843. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 T.annulata:74

A8JA11              	100.00%		Q4UIG5              	100.00%
Bootstrap support for A8JA11 as seed ortholog is 100%.
Bootstrap support for Q4UIG5 as seed ortholog is 100%.

Group of orthologs #844. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 T.annulata:74

Q944M8              	100.00%		Q4U951              	100.00%
Bootstrap support for Q944M8 as seed ortholog is 75%.
Bootstrap support for Q4U951 as seed ortholog is 100%.

Group of orthologs #845. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 T.annulata:73

A8HW20              	100.00%		Q4UDZ7              	100.00%
Bootstrap support for A8HW20 as seed ortholog is 100%.
Bootstrap support for Q4UDZ7 as seed ortholog is 100%.

Group of orthologs #846. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 T.annulata:73

A8IXR5              	100.00%		Q4UF88              	100.00%
Bootstrap support for A8IXR5 as seed ortholog is 100%.
Bootstrap support for Q4UF88 as seed ortholog is 100%.

Group of orthologs #847. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 T.annulata:73

A8JHR3              	100.00%		Q4U912              	100.00%
Bootstrap support for A8JHR3 as seed ortholog is 100%.
Bootstrap support for Q4U912 as seed ortholog is 100%.

Group of orthologs #848. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 T.annulata:72

A8HRS8              	100.00%		Q4UF56              	100.00%
Bootstrap support for A8HRS8 as seed ortholog is 100%.
Bootstrap support for Q4UF56 as seed ortholog is 100%.

Group of orthologs #849. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 T.annulata:72

A8IUW8              	100.00%		Q4UA08              	100.00%
Bootstrap support for A8IUW8 as seed ortholog is 100%.
Bootstrap support for Q4UA08 as seed ortholog is 100%.

Group of orthologs #850. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 T.annulata:72

A8J3X5              	100.00%		Q4U9D1              	100.00%
Bootstrap support for A8J3X5 as seed ortholog is 100%.
Bootstrap support for Q4U9D1 as seed ortholog is 100%.

Group of orthologs #851. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 T.annulata:71

A8JBW3              	100.00%		Q4UCU4              	100.00%
A8IJN6              	5.36%		Q4U8F7              	11.19%
Bootstrap support for A8JBW3 as seed ortholog is 100%.
Bootstrap support for Q4UCU4 as seed ortholog is 100%.

Group of orthologs #852. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 T.annulata:71

A8I4L4              	100.00%		Q4UGH4              	100.00%
Bootstrap support for A8I4L4 as seed ortholog is 100%.
Bootstrap support for Q4UGH4 as seed ortholog is 100%.

Group of orthologs #853. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 T.annulata:71

A8ISK5              	100.00%		Q4UGW1              	100.00%
Bootstrap support for A8ISK5 as seed ortholog is 100%.
Bootstrap support for Q4UGW1 as seed ortholog is 100%.

Group of orthologs #854. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 T.annulata:71

A8J6T1              	100.00%		Q4UFQ4              	100.00%
Bootstrap support for A8J6T1 as seed ortholog is 100%.
Bootstrap support for Q4UFQ4 as seed ortholog is 100%.

Group of orthologs #855. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 T.annulata:71

A8JEV9              	100.00%		Q4UBA7              	100.00%
Bootstrap support for A8JEV9 as seed ortholog is 100%.
Bootstrap support for Q4UBA7 as seed ortholog is 100%.

Group of orthologs #856. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 T.annulata:70

A8HYJ4              	100.00%		Q4UIS6              	100.00%
                    	       		Q4UIS1              	59.04%
                    	       		Q4UIS0              	29.31%
                    	       		Q4UIS4              	28.90%
                    	       		Q4UIR9              	28.07%
                    	       		Q4UIR8              	26.82%
                    	       		Q4UI51              	23.08%
                    	       		Q4UIS5              	13.31%
Bootstrap support for A8HYJ4 as seed ortholog is 100%.
Bootstrap support for Q4UIS6 as seed ortholog is 100%.

Group of orthologs #857. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 T.annulata:70

A8IJY1              	100.00%		Q4UDQ7              	100.00%
Bootstrap support for A8IJY1 as seed ortholog is 100%.
Bootstrap support for Q4UDQ7 as seed ortholog is 100%.

Group of orthologs #858. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:3

A8HRP7              	100.00%		Q4U9J3              	100.00%
A8JHU3              	100.00%		
Bootstrap support for A8HRP7 as seed ortholog is 100%.
Bootstrap support for A8JHU3 as seed ortholog is 100%.
Bootstrap support for Q4U9J3 as seed ortholog is 55%.
Alternative seed ortholog is Q4UD30 (3 bits away from this cluster)

Group of orthologs #859. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:69

A8IT66              	100.00%		Q4UBJ0              	100.00%
A8HZC0              	6.82%		
Bootstrap support for A8IT66 as seed ortholog is 100%.
Bootstrap support for Q4UBJ0 as seed ortholog is 100%.

Group of orthologs #860. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:69

A8HP31              	100.00%		Q4UAJ0              	100.00%
Bootstrap support for A8HP31 as seed ortholog is 100%.
Bootstrap support for Q4UAJ0 as seed ortholog is 100%.

Group of orthologs #861. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:69

A8ICX2              	100.00%		Q4UFG8              	100.00%
Bootstrap support for A8ICX2 as seed ortholog is 100%.
Bootstrap support for Q4UFG8 as seed ortholog is 100%.

Group of orthologs #862. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:69

A8ITW3              	100.00%		Q4UAX0              	100.00%
Bootstrap support for A8ITW3 as seed ortholog is 100%.
Bootstrap support for Q4UAX0 as seed ortholog is 100%.

Group of orthologs #863. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:69

A8IWT0              	100.00%		Q4UII7              	100.00%
Bootstrap support for A8IWT0 as seed ortholog is 100%.
Bootstrap support for Q4UII7 as seed ortholog is 100%.

Group of orthologs #864. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 T.annulata:69

A8JHW7              	100.00%		Q4UE04              	100.00%
Bootstrap support for A8JHW7 as seed ortholog is 100%.
Bootstrap support for Q4UE04 as seed ortholog is 100%.

Group of orthologs #865. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 T.annulata:68

A8I4U4              	100.00%		Q4UBS5              	100.00%
Bootstrap support for A8I4U4 as seed ortholog is 100%.
Bootstrap support for Q4UBS5 as seed ortholog is 100%.

Group of orthologs #866. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 T.annulata:68

A8IX67              	100.00%		Q4UDE5              	100.00%
Bootstrap support for A8IX67 as seed ortholog is 100%.
Bootstrap support for Q4UDE5 as seed ortholog is 100%.

Group of orthologs #867. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 T.annulata:68

A8JGC0              	100.00%		Q4UBH6              	100.00%
Bootstrap support for A8JGC0 as seed ortholog is 100%.
Bootstrap support for Q4UBH6 as seed ortholog is 100%.

Group of orthologs #868. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 T.annulata:67

A8JFK9              	100.00%		Q4UFU5              	100.00%
A8HTY0              	5.37%		
Bootstrap support for A8JFK9 as seed ortholog is 100%.
Bootstrap support for Q4UFU5 as seed ortholog is 100%.

Group of orthologs #869. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 T.annulata:67

A8IUB3              	100.00%		Q4UHI9              	100.00%
Bootstrap support for A8IUB3 as seed ortholog is 100%.
Bootstrap support for Q4UHI9 as seed ortholog is 100%.

Group of orthologs #870. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 T.annulata:67

A8J0E8              	100.00%		Q4UE58              	100.00%
Bootstrap support for A8J0E8 as seed ortholog is 100%.
Bootstrap support for Q4UE58 as seed ortholog is 100%.

Group of orthologs #871. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 T.annulata:67

A8J7Q4              	100.00%		Q4UIU5              	100.00%
Bootstrap support for A8J7Q4 as seed ortholog is 100%.
Bootstrap support for Q4UIU5 as seed ortholog is 100%.

Group of orthologs #872. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 T.annulata:66

A8J625              	100.00%		Q4UGE5              	100.00%
A8J5L3              	39.84%		
Bootstrap support for A8J625 as seed ortholog is 100%.
Bootstrap support for Q4UGE5 as seed ortholog is 100%.

Group of orthologs #873. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 T.annulata:66

A8HQS2              	100.00%		Q4UHY8              	100.00%
Bootstrap support for A8HQS2 as seed ortholog is 100%.
Bootstrap support for Q4UHY8 as seed ortholog is 100%.

Group of orthologs #874. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 T.annulata:66

A8IYP5              	100.00%		Q4UDA2              	100.00%
Bootstrap support for A8IYP5 as seed ortholog is 78%.
Bootstrap support for Q4UDA2 as seed ortholog is 100%.

Group of orthologs #875. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 T.annulata:66

A8J3E1              	100.00%		Q4UAI9              	100.00%
Bootstrap support for A8J3E1 as seed ortholog is 100%.
Bootstrap support for Q4UAI9 as seed ortholog is 100%.

Group of orthologs #876. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 T.annulata:65

A8IH64              	100.00%		Q4UDN8              	100.00%
Bootstrap support for A8IH64 as seed ortholog is 100%.
Bootstrap support for Q4UDN8 as seed ortholog is 100%.

Group of orthologs #877. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 T.annulata:65

A8J5R2              	100.00%		Q4UG58              	100.00%
Bootstrap support for A8J5R2 as seed ortholog is 100%.
Bootstrap support for Q4UG58 as seed ortholog is 100%.

Group of orthologs #878. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 T.annulata:12

A8JGJ7              	100.00%		Q4UBA4              	100.00%
Bootstrap support for A8JGJ7 as seed ortholog is 100%.
Bootstrap support for Q4UBA4 as seed ortholog is 67%.
Alternative seed ortholog is Q4UHR8 (12 bits away from this cluster)

Group of orthologs #879. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 T.annulata:65

A8JD95              	100.00%		Q4UHK3              	100.00%
Bootstrap support for A8JD95 as seed ortholog is 100%.
Bootstrap support for Q4UHK3 as seed ortholog is 100%.

Group of orthologs #880. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 T.annulata:64

A8JB74              	100.00%		Q4UE86              	100.00%
Bootstrap support for A8JB74 as seed ortholog is 100%.
Bootstrap support for Q4UE86 as seed ortholog is 100%.

Group of orthologs #881. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 T.annulata:63

A8IZR5              	100.00%		Q4UA88              	100.00%
Q84XS0              	14.02%		
Q84XR8              	9.15%		
Bootstrap support for A8IZR5 as seed ortholog is 33%.
Alternative seed ortholog is A8J8H1 (9 bits away from this cluster)
Bootstrap support for Q4UA88 as seed ortholog is 100%.

Group of orthologs #882. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 T.annulata:63

A8I1P7              	100.00%		Q4UAK3              	100.00%
Bootstrap support for A8I1P7 as seed ortholog is 100%.
Bootstrap support for Q4UAK3 as seed ortholog is 100%.

Group of orthologs #883. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 T.annulata:63

A8IK60              	100.00%		Q4U9S7              	100.00%
Bootstrap support for A8IK60 as seed ortholog is 100%.
Bootstrap support for Q4U9S7 as seed ortholog is 100%.

Group of orthologs #884. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 T.annulata:63

A8I8A8              	100.00%		Q4UE97              	100.00%
Bootstrap support for A8I8A8 as seed ortholog is 100%.
Bootstrap support for Q4UE97 as seed ortholog is 100%.

Group of orthologs #885. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 T.annulata:63

A8JBT8              	100.00%		Q4UC78              	100.00%
Bootstrap support for A8JBT8 as seed ortholog is 100%.
Bootstrap support for Q4UC78 as seed ortholog is 100%.

Group of orthologs #886. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 T.annulata:62

A8J7D3              	100.00%		Q4UC23              	100.00%
A8J470              	32.86%		
A8II51              	29.31%		
A8JEP2              	26.29%		
A8I7Z1              	25.58%		
A8IV51              	25.40%		
A8I8D0              	23.62%		
A8I8D2              	23.27%		
A8IBT2              	22.91%		
A8I5E0              	20.60%		
A8I112              	17.94%		
A8HPH4              	15.81%		
A8IC88              	15.10%		
Bootstrap support for A8J7D3 as seed ortholog is 100%.
Bootstrap support for Q4UC23 as seed ortholog is 100%.

Group of orthologs #887. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 T.annulata:62

A8ITN6              	100.00%		Q4U9J5              	100.00%
Bootstrap support for A8ITN6 as seed ortholog is 100%.
Bootstrap support for Q4U9J5 as seed ortholog is 100%.

Group of orthologs #888. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 T.annulata:62

A8J1I2              	100.00%		Q4UJ14              	100.00%
Bootstrap support for A8J1I2 as seed ortholog is 100%.
Bootstrap support for Q4UJ14 as seed ortholog is 100%.

Group of orthologs #889. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 T.annulata:62

Q8GUQ9              	100.00%		Q4UGN5              	100.00%
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.
Bootstrap support for Q4UGN5 as seed ortholog is 100%.

Group of orthologs #890. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:61

A8J0Z0              	100.00%		Q4UIC0              	100.00%
A8JE79              	100.00%		
A8J0Y9              	61.57%		
Bootstrap support for A8J0Z0 as seed ortholog is 100%.
Bootstrap support for A8JE79 as seed ortholog is 100%.
Bootstrap support for Q4UIC0 as seed ortholog is 100%.

Group of orthologs #891. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:61

A8I3U7              	100.00%		Q4U9W9              	100.00%
A8I501              	61.98%		
Bootstrap support for A8I3U7 as seed ortholog is 100%.
Bootstrap support for Q4U9W9 as seed ortholog is 100%.

Group of orthologs #892. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 T.annulata:61

A8I5E8              	100.00%		Q4UAV2              	100.00%
Bootstrap support for A8I5E8 as seed ortholog is 100%.
Bootstrap support for Q4UAV2 as seed ortholog is 100%.

Group of orthologs #893. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 T.annulata:13

A8I6C7              	100.00%		Q4UGR1              	100.00%
Bootstrap support for A8I6C7 as seed ortholog is 100%.
Bootstrap support for Q4UGR1 as seed ortholog is 76%.

Group of orthologs #894. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 T.annulata:60

A8IJG5              	100.00%		Q4UGK7              	100.00%
Bootstrap support for A8IJG5 as seed ortholog is 100%.
Bootstrap support for Q4UGK7 as seed ortholog is 100%.

Group of orthologs #895. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 T.annulata:60

A8J9C0              	100.00%		Q4UBS8              	100.00%
Bootstrap support for A8J9C0 as seed ortholog is 100%.
Bootstrap support for Q4UBS8 as seed ortholog is 100%.

Group of orthologs #896. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 T.annulata:60

A8JG36              	100.00%		Q4UGB6              	100.00%
Bootstrap support for A8JG36 as seed ortholog is 100%.
Bootstrap support for Q4UGB6 as seed ortholog is 100%.

Group of orthologs #897. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 T.annulata:59

A8I243              	100.00%		Q4UGF1              	100.00%
Bootstrap support for A8I243 as seed ortholog is 100%.
Bootstrap support for Q4UGF1 as seed ortholog is 100%.

Group of orthologs #898. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 T.annulata:59

A8INA3              	100.00%		Q4UCQ4              	100.00%
Bootstrap support for A8INA3 as seed ortholog is 100%.
Bootstrap support for Q4UCQ4 as seed ortholog is 100%.

Group of orthologs #899. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 T.annulata:59

A8JFB7              	100.00%		Q4UE17              	100.00%
Bootstrap support for A8JFB7 as seed ortholog is 74%.
Alternative seed ortholog is A8J2W3 (17 bits away from this cluster)
Bootstrap support for Q4UE17 as seed ortholog is 100%.

Group of orthologs #900. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 T.annulata:59

A8JH49              	100.00%		Q4UHL5              	100.00%
Bootstrap support for A8JH49 as seed ortholog is 100%.
Bootstrap support for Q4UHL5 as seed ortholog is 100%.

Group of orthologs #901. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 T.annulata:58

A8J9X1              	100.00%		Q4UDV7              	100.00%
Bootstrap support for A8J9X1 as seed ortholog is 100%.
Bootstrap support for Q4UDV7 as seed ortholog is 100%.

Group of orthologs #902. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 T.annulata:57

A8JBE3              	100.00%		Q4UGU8              	100.00%
Bootstrap support for A8JBE3 as seed ortholog is 100%.
Bootstrap support for Q4UGU8 as seed ortholog is 100%.

Group of orthologs #903. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 T.annulata:56

A8INU5              	100.00%		Q4UAB1              	100.00%
Bootstrap support for A8INU5 as seed ortholog is 100%.
Bootstrap support for Q4UAB1 as seed ortholog is 100%.

Group of orthologs #904. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 T.annulata:56

A8IYX0              	100.00%		Q4UIY4              	100.00%
Bootstrap support for A8IYX0 as seed ortholog is 100%.
Bootstrap support for Q4UIY4 as seed ortholog is 100%.

Group of orthologs #905. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 T.annulata:56

A8JH11              	100.00%		Q4UE82              	100.00%
Bootstrap support for A8JH11 as seed ortholog is 100%.
Bootstrap support for Q4UE82 as seed ortholog is 100%.

Group of orthologs #906. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 T.annulata:55

A8HTE8              	100.00%		Q4UH73              	100.00%
Bootstrap support for A8HTE8 as seed ortholog is 100%.
Bootstrap support for Q4UH73 as seed ortholog is 100%.

Group of orthologs #907. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 T.annulata:54

A8I3K3              	100.00%		Q4UIJ3              	100.00%
Bootstrap support for A8I3K3 as seed ortholog is 100%.
Bootstrap support for Q4UIJ3 as seed ortholog is 100%.

Group of orthologs #908. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 T.annulata:53

A8HVE3              	100.00%		Q4UIK4              	100.00%
A8HVV8              	32.44%		
A8ITL9              	18.29%		
A8ICN5              	17.80%		
Bootstrap support for A8HVE3 as seed ortholog is 100%.
Bootstrap support for Q4UIK4 as seed ortholog is 100%.

Group of orthologs #909. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 T.annulata:53

A8I6W9              	100.00%		Q4UD22              	100.00%
Bootstrap support for A8I6W9 as seed ortholog is 100%.
Bootstrap support for Q4UD22 as seed ortholog is 100%.

Group of orthologs #910. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 T.annulata:53

A8JFQ2              	100.00%		Q4UDT4              	100.00%
Bootstrap support for A8JFQ2 as seed ortholog is 100%.
Bootstrap support for Q4UDT4 as seed ortholog is 100%.

Group of orthologs #911. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 T.annulata:53

A8JHF2              	100.00%		Q4UGL6              	100.00%
Bootstrap support for A8JHF2 as seed ortholog is 100%.
Bootstrap support for Q4UGL6 as seed ortholog is 100%.

Group of orthologs #912. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 T.annulata:52

A8HNP5              	100.00%		Q4UCK7              	100.00%
Bootstrap support for A8HNP5 as seed ortholog is 100%.
Bootstrap support for Q4UCK7 as seed ortholog is 100%.

Group of orthologs #913. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 T.annulata:52

A8IRU4              	100.00%		Q4UB50              	100.00%
Bootstrap support for A8IRU4 as seed ortholog is 100%.
Bootstrap support for Q4UB50 as seed ortholog is 100%.

Group of orthologs #914. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 T.annulata:52

A8J3U9              	100.00%		Q4UIC1              	100.00%
Bootstrap support for A8J3U9 as seed ortholog is 100%.
Bootstrap support for Q4UIC1 as seed ortholog is 100%.

Group of orthologs #915. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 T.annulata:51

A8ITQ1              	100.00%		Q4UEJ2              	100.00%
Bootstrap support for A8ITQ1 as seed ortholog is 100%.
Bootstrap support for Q4UEJ2 as seed ortholog is 100%.

Group of orthologs #916. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 T.annulata:50

A8IGB8              	100.00%		Q4UFK8              	100.00%
Bootstrap support for A8IGB8 as seed ortholog is 100%.
Bootstrap support for Q4UFK8 as seed ortholog is 100%.

Group of orthologs #917. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 T.annulata:50

A8IRS9              	100.00%		Q4UC43              	100.00%
Bootstrap support for A8IRS9 as seed ortholog is 100%.
Bootstrap support for Q4UC43 as seed ortholog is 100%.

Group of orthologs #918. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 T.annulata:49

A8JD99              	100.00%		Q4UD16              	100.00%
A8IWD6              	5.45%		
Bootstrap support for A8JD99 as seed ortholog is 100%.
Bootstrap support for Q4UD16 as seed ortholog is 100%.

Group of orthologs #919. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 T.annulata:49

A8JIV5              	100.00%		Q4UDG4              	100.00%
Bootstrap support for A8JIV5 as seed ortholog is 100%.
Bootstrap support for Q4UDG4 as seed ortholog is 100%.

Group of orthologs #920. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 T.annulata:49

P59775              	100.00%		Q4UJ49              	100.00%
Bootstrap support for P59775 as seed ortholog is 100%.
Bootstrap support for Q4UJ49 as seed ortholog is 100%.

Group of orthologs #921. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 T.annulata:48

A8HZ65              	100.00%		Q4UCE8              	100.00%
A8J3T5              	41.03%		
A8JJY7              	21.03%		
A8ILD3              	5.17%		
Bootstrap support for A8HZ65 as seed ortholog is 100%.
Bootstrap support for Q4UCE8 as seed ortholog is 100%.

Group of orthologs #922. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:47

A8IT49              	100.00%		Q4UCT2              	100.00%
A8IT48              	64.40%		
A8IT73              	52.62%		
A8IT75              	43.72%		
A8J924              	14.40%		
Bootstrap support for A8IT49 as seed ortholog is 100%.
Bootstrap support for Q4UCT2 as seed ortholog is 100%.

Group of orthologs #923. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:47

A8JB96              	100.00%		Q4UIK0              	100.00%
A8IAF7              	5.86%		
Bootstrap support for A8JB96 as seed ortholog is 100%.
Bootstrap support for Q4UIK0 as seed ortholog is 100%.

Group of orthologs #924. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:47

A8I0J4              	100.00%		Q4U8W7              	100.00%
Bootstrap support for A8I0J4 as seed ortholog is 100%.
Bootstrap support for Q4U8W7 as seed ortholog is 100%.

Group of orthologs #925. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:47

A8HQJ0              	100.00%		Q4UGL2              	100.00%
Bootstrap support for A8HQJ0 as seed ortholog is 100%.
Bootstrap support for Q4UGL2 as seed ortholog is 100%.

Group of orthologs #926. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:47

A8J6T2              	100.00%		Q4U9N3              	100.00%
Bootstrap support for A8J6T2 as seed ortholog is 100%.
Bootstrap support for Q4U9N3 as seed ortholog is 100%.

Group of orthologs #927. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 T.annulata:1

A8J1W0              	100.00%		Q4UHH8              	100.00%
Bootstrap support for A8J1W0 as seed ortholog is 100%.
Bootstrap support for Q4UHH8 as seed ortholog is 52%.
Alternative seed ortholog is Q4UCP6 (1 bits away from this cluster)

Group of orthologs #928. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 T.annulata:46

A8JFU8              	100.00%		Q4UB25              	100.00%
A8HSY2              	76.22%		Q4UBR9              	5.21%
A8JFU7              	43.92%		
A8JD29              	21.35%		
A8IUA1              	16.49%		
Bootstrap support for A8JFU8 as seed ortholog is 100%.
Bootstrap support for Q4UB25 as seed ortholog is 100%.

Group of orthologs #929. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 T.annulata:46

A8IQY8              	100.00%		Q4UIG4              	100.00%
Bootstrap support for A8IQY8 as seed ortholog is 100%.
Bootstrap support for Q4UIG4 as seed ortholog is 100%.

Group of orthologs #930. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 T.annulata:45

A8HSU4              	100.00%		Q4UB02              	100.00%
Bootstrap support for A8HSU4 as seed ortholog is 100%.
Bootstrap support for Q4UB02 as seed ortholog is 100%.

Group of orthologs #931. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 T.annulata:45

A8I2N9              	100.00%		Q4UH88              	100.00%
Bootstrap support for A8I2N9 as seed ortholog is 100%.
Bootstrap support for Q4UH88 as seed ortholog is 100%.

Group of orthologs #932. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 T.annulata:45

A8IYX9              	100.00%		Q4UA34              	100.00%
Bootstrap support for A8IYX9 as seed ortholog is 51%.
Alternative seed ortholog is A8JH36 (1 bits away from this cluster)
Bootstrap support for Q4UA34 as seed ortholog is 100%.

Group of orthologs #933. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 T.annulata:44

A8IUC0              	100.00%		Q4UBN3              	100.00%
A8HQP6              	18.60%		
A8JHG3              	12.98%		
Bootstrap support for A8IUC0 as seed ortholog is 100%.
Bootstrap support for Q4UBN3 as seed ortholog is 100%.

Group of orthologs #934. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 T.annulata:44

Q6UKY5              	100.00%		Q4UF65              	100.00%
Q6UKY4              	8.14%		
Bootstrap support for Q6UKY5 as seed ortholog is 100%.
Bootstrap support for Q4UF65 as seed ortholog is 100%.

Group of orthologs #935. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 T.annulata:44

A8HX63              	100.00%		Q4UHG8              	100.00%
Bootstrap support for A8HX63 as seed ortholog is 100%.
Bootstrap support for Q4UHG8 as seed ortholog is 100%.

Group of orthologs #936. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 T.annulata:42

A8IS58              	100.00%		Q4U9C9              	100.00%
Bootstrap support for A8IS58 as seed ortholog is 100%.
Bootstrap support for Q4U9C9 as seed ortholog is 100%.

Group of orthologs #937. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 T.annulata:41

A8IMX2              	100.00%		Q4UDU5              	100.00%
Bootstrap support for A8IMX2 as seed ortholog is 100%.
Bootstrap support for Q4UDU5 as seed ortholog is 100%.

Group of orthologs #938. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 T.annulata:40

A8J6P9              	100.00%		Q4UFA9              	100.00%
Q9GGE2              	13.98%		
Bootstrap support for A8J6P9 as seed ortholog is 100%.
Bootstrap support for Q4UFA9 as seed ortholog is 100%.

Group of orthologs #939. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 T.annulata:40

A8JD04              	100.00%		Q4UBE6              	100.00%
A8JBK5              	15.17%		
Bootstrap support for A8JD04 as seed ortholog is 100%.
Bootstrap support for Q4UBE6 as seed ortholog is 100%.

Group of orthologs #940. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 T.annulata:40

A8JEX0              	100.00%		Q4UBC7              	100.00%
Bootstrap support for A8JEX0 as seed ortholog is 100%.
Bootstrap support for Q4UBC7 as seed ortholog is 100%.