###################################
1582 groups of orthologs
1930 in-paralogs from C.reinhardtii
1870 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3113 S.stipitis:3113

A8HPL0              	100.00%		A3LYV9              	100.00%
Bootstrap support for A8HPL0 as seed ortholog is 100%.
Bootstrap support for A3LYV9 as seed ortholog is 100%.

Group of orthologs #2. Best score 2053 bits
Score difference with first non-orthologous sequence - C.reinhardtii:930 S.stipitis:2053

A8IWA6              	100.00%		A3LQK2              	100.00%
Bootstrap support for A8IWA6 as seed ortholog is 100%.
Bootstrap support for A3LQK2 as seed ortholog is 100%.

Group of orthologs #3. Best score 1729 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1345 S.stipitis:969

A8IRZ2              	100.00%		A3GID7              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #4. Best score 1465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1465 S.stipitis:327

A8JI25              	100.00%		A3GEY0              	100.00%
Bootstrap support for A8JI25 as seed ortholog is 100%.
Bootstrap support for A3GEY0 as seed ortholog is 99%.

Group of orthologs #5. Best score 1388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1388 S.stipitis:1388

A8I4S9              	100.00%		A3LV67              	100.00%
Bootstrap support for A8I4S9 as seed ortholog is 100%.
Bootstrap support for A3LV67 as seed ortholog is 100%.

Group of orthologs #6. Best score 1292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1292 S.stipitis:1292

A8I9Z6              	100.00%		A3GFG5              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 100%.
Bootstrap support for A3GFG5 as seed ortholog is 100%.

Group of orthologs #7. Best score 1225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1225 S.stipitis:1225

A8IY03              	100.00%		A3LP81              	100.00%
Bootstrap support for A8IY03 as seed ortholog is 100%.
Bootstrap support for A3LP81 as seed ortholog is 100%.

Group of orthologs #8. Best score 1199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 S.stipitis:1199

A8JHU7              	100.00%		A3LZU2              	100.00%
A8IUF0              	16.20%		
A8J1M5              	14.09%		
A8J063              	11.82%		
A8I5C3              	11.65%		
A8I3X6              	11.17%		
A8ISA6              	10.46%		
A8IV22              	10.04%		
A8IYR9              	9.67%		
A8J336              	9.46%		
A8I3V9              	7.26%		
A8JFP1              	6.84%		
Bootstrap support for A8JHU7 as seed ortholog is 99%.
Bootstrap support for A3LZU2 as seed ortholog is 100%.

Group of orthologs #9. Best score 1123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1123 S.stipitis:1123

A8JD08              	100.00%		A3GF24              	100.00%
Bootstrap support for A8JD08 as seed ortholog is 100%.
Bootstrap support for A3GF24 as seed ortholog is 100%.

Group of orthologs #10. Best score 1110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:697 S.stipitis:650

A8HW56              	100.00%		A3LQG9              	100.00%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for A3LQG9 as seed ortholog is 100%.

Group of orthologs #11. Best score 1082 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1082 S.stipitis:200

A8JDR3              	100.00%		A3LNA5              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 99%.

Group of orthologs #12. Best score 1078 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1078 S.stipitis:985

A8J9F3              	100.00%		A3LTD7              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #13. Best score 1040 bits
Score difference with first non-orthologous sequence - C.reinhardtii:891 S.stipitis:597

A8JHX9              	100.00%		A3LNB1              	100.00%
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for A3LNB1 as seed ortholog is 100%.

Group of orthologs #14. Best score 1037 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1037 S.stipitis:1037

A8HRR9              	100.00%		A3LNZ5              	100.00%
Bootstrap support for A8HRR9 as seed ortholog is 100%.
Bootstrap support for A3LNZ5 as seed ortholog is 100%.

Group of orthologs #15. Best score 1005 bits
Score difference with first non-orthologous sequence - C.reinhardtii:750 S.stipitis:720

A8HPJ0              	100.00%		A3LYU1              	100.00%
Bootstrap support for A8HPJ0 as seed ortholog is 100%.
Bootstrap support for A3LYU1 as seed ortholog is 100%.

Group of orthologs #16. Best score 985 bits
Score difference with first non-orthologous sequence - C.reinhardtii:985 S.stipitis:116

A8HMQ1              	100.00%		A3LYW7              	100.00%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for A3LYW7 as seed ortholog is 98%.

Group of orthologs #17. Best score 970 bits
Score difference with first non-orthologous sequence - C.reinhardtii:970 S.stipitis:970

A8IDG4              	100.00%		A3LPB9              	100.00%
Bootstrap support for A8IDG4 as seed ortholog is 100%.
Bootstrap support for A3LPB9 as seed ortholog is 100%.

Group of orthologs #18. Best score 969 bits
Score difference with first non-orthologous sequence - C.reinhardtii:969 S.stipitis:969

A8IFY3              	100.00%		A3LSZ4              	100.00%
Bootstrap support for A8IFY3 as seed ortholog is 100%.
Bootstrap support for A3LSZ4 as seed ortholog is 100%.

Group of orthologs #19. Best score 957 bits
Score difference with first non-orthologous sequence - C.reinhardtii:554 S.stipitis:957

A8JGG4              	100.00%		A3GG31              	100.00%
Bootstrap support for A8JGG4 as seed ortholog is 100%.
Bootstrap support for A3GG31 as seed ortholog is 100%.

Group of orthologs #20. Best score 948 bits
Score difference with first non-orthologous sequence - C.reinhardtii:948 S.stipitis:948

A8JH01              	100.00%		A3LNC3              	100.00%
                    	       		A3LNW6              	10.84%
                    	       		A3GHC9              	9.88%
Bootstrap support for A8JH01 as seed ortholog is 100%.
Bootstrap support for A3LNC3 as seed ortholog is 100%.

Group of orthologs #21. Best score 945 bits
Score difference with first non-orthologous sequence - C.reinhardtii:945 S.stipitis:945

A8IVM9              	100.00%		A3LQC8              	100.00%
Bootstrap support for A8IVM9 as seed ortholog is 100%.
Bootstrap support for A3LQC8 as seed ortholog is 100%.

Group of orthologs #22. Best score 943 bits
Score difference with first non-orthologous sequence - C.reinhardtii:943 S.stipitis:943

A8IWF9              	100.00%		A3M082              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for A3M082 as seed ortholog is 100%.

Group of orthologs #23. Best score 934 bits
Score difference with first non-orthologous sequence - C.reinhardtii:934 S.stipitis:934

A8J7V3              	100.00%		A3LYF1              	100.00%
Bootstrap support for A8J7V3 as seed ortholog is 100%.
Bootstrap support for A3LYF1 as seed ortholog is 100%.

Group of orthologs #24. Best score 921 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 S.stipitis:244

A8JEU4              	100.00%		A3GGW0              	100.00%
                    	       		A3LXD9              	47.08%
Bootstrap support for A8JEU4 as seed ortholog is 100%.
Bootstrap support for A3GGW0 as seed ortholog is 100%.

Group of orthologs #25. Best score 914 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 S.stipitis:914

A8J1U1              	100.00%		A3LPD9              	100.00%
Bootstrap support for A8J1U1 as seed ortholog is 100%.
Bootstrap support for A3LPD9 as seed ortholog is 100%.

Group of orthologs #26. Best score 906 bits
Score difference with first non-orthologous sequence - C.reinhardtii:906 S.stipitis:906

A8IVG0              	100.00%		A3LZW8              	100.00%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #27. Best score 896 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 S.stipitis:896

A8HXT4              	100.00%		A3LYM8              	100.00%
Bootstrap support for A8HXT4 as seed ortholog is 100%.
Bootstrap support for A3LYM8 as seed ortholog is 100%.

Group of orthologs #28. Best score 868 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:342

A8JGT9              	100.00%		A3LY83              	100.00%
Bootstrap support for A8JGT9 as seed ortholog is 99%.
Bootstrap support for A3LY83 as seed ortholog is 100%.

Group of orthologs #29. Best score 861 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 S.stipitis:408

A8IK98              	100.00%		A3LQ23              	100.00%
                    	       		A3GFQ5              	7.86%
Bootstrap support for A8IK98 as seed ortholog is 100%.
Bootstrap support for A3LQ23 as seed ortholog is 100%.

Group of orthologs #30. Best score 861 bits
Score difference with first non-orthologous sequence - C.reinhardtii:861 S.stipitis:861

A8J2W2              	100.00%		A3GH27              	100.00%
Bootstrap support for A8J2W2 as seed ortholog is 100%.
Bootstrap support for A3GH27 as seed ortholog is 100%.

Group of orthologs #31. Best score 855 bits
Score difference with first non-orthologous sequence - C.reinhardtii:575 S.stipitis:855

A8HP06              	100.00%		A3GF06              	100.00%
Bootstrap support for A8HP06 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 100%.

Group of orthologs #32. Best score 855 bits
Score difference with first non-orthologous sequence - C.reinhardtii:546 S.stipitis:415

A8J568              	100.00%		A3LYS3              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for A3LYS3 as seed ortholog is 99%.

Group of orthologs #33. Best score 844 bits
Score difference with first non-orthologous sequence - C.reinhardtii:844 S.stipitis:844

A8J1C1              	100.00%		A3LQ33              	100.00%
Bootstrap support for A8J1C1 as seed ortholog is 100%.
Bootstrap support for A3LQ33 as seed ortholog is 100%.

Group of orthologs #34. Best score 842 bits
Score difference with first non-orthologous sequence - C.reinhardtii:842 S.stipitis:842

A8IYK1              	100.00%		A3LWF3              	100.00%
Q2VA40              	8.42%		
Bootstrap support for A8IYK1 as seed ortholog is 100%.
Bootstrap support for A3LWF3 as seed ortholog is 100%.

Group of orthologs #35. Best score 830 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 S.stipitis:179

A8I7T8              	100.00%		A3LN25              	100.00%
A8I7S9              	71.18%		
Bootstrap support for A8I7T8 as seed ortholog is 100%.
Bootstrap support for A3LN25 as seed ortholog is 99%.

Group of orthologs #36. Best score 824 bits
Score difference with first non-orthologous sequence - C.reinhardtii:599 S.stipitis:124

A8ISZ1              	100.00%		A3LX00              	100.00%
Bootstrap support for A8ISZ1 as seed ortholog is 100%.
Bootstrap support for A3LX00 as seed ortholog is 95%.

Group of orthologs #37. Best score 822 bits
Score difference with first non-orthologous sequence - C.reinhardtii:822 S.stipitis:822

A8I9D7              	100.00%		F5Y6K2              	100.00%
Bootstrap support for A8I9D7 as seed ortholog is 100%.
Bootstrap support for F5Y6K2 as seed ortholog is 100%.

Group of orthologs #38. Best score 794 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 S.stipitis:124

A8IE86              	100.00%		A3LPF9              	100.00%
                    	       		A3LYW5              	12.82%
                    	       		A3LNZ8              	10.99%
                    	       		A3LQB3              	10.95%
                    	       		A3LWA2              	10.28%
Bootstrap support for A8IE86 as seed ortholog is 80%.
Bootstrap support for A3LPF9 as seed ortholog is 97%.

Group of orthologs #39. Best score 783 bits
Score difference with first non-orthologous sequence - C.reinhardtii:783 S.stipitis:783

A8HZ23              	100.00%		A3LUF6              	100.00%
Bootstrap support for A8HZ23 as seed ortholog is 100%.
Bootstrap support for A3LUF6 as seed ortholog is 100%.

Group of orthologs #40. Best score 762 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:196

A8IZU0              	100.00%		A3LYI6              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 99%.
Bootstrap support for A3LYI6 as seed ortholog is 100%.

Group of orthologs #41. Best score 741 bits
Score difference with first non-orthologous sequence - C.reinhardtii:509 S.stipitis:741

A8JCF0              	100.00%		A3M0C1              	100.00%
Bootstrap support for A8JCF0 as seed ortholog is 100%.
Bootstrap support for A3M0C1 as seed ortholog is 100%.

Group of orthologs #42. Best score 740 bits
Score difference with first non-orthologous sequence - C.reinhardtii:740 S.stipitis:740

A8JGS8              	100.00%		A3LTA6              	100.00%
Bootstrap support for A8JGS8 as seed ortholog is 100%.
Bootstrap support for A3LTA6 as seed ortholog is 100%.

Group of orthologs #43. Best score 737 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:80

A8IVJ6              	100.00%		A3LZJ0              	100.00%
A8IVJ3              	37.84%		
Bootstrap support for A8IVJ6 as seed ortholog is 76%.
Bootstrap support for A3LZJ0 as seed ortholog is 88%.

Group of orthologs #44. Best score 728 bits
Score difference with first non-orthologous sequence - C.reinhardtii:728 S.stipitis:618

A8JI26              	100.00%		A3LVX3              	100.00%
Bootstrap support for A8JI26 as seed ortholog is 100%.
Bootstrap support for A3LVX3 as seed ortholog is 100%.

Group of orthologs #45. Best score 722 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 S.stipitis:722

A8I972              	100.00%		A3LN85              	100.00%
Bootstrap support for A8I972 as seed ortholog is 100%.
Bootstrap support for A3LN85 as seed ortholog is 100%.

Group of orthologs #46. Best score 722 bits
Score difference with first non-orthologous sequence - C.reinhardtii:585 S.stipitis:594

A8IA45              	100.00%		A3LY21              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for A3LY21 as seed ortholog is 100%.

Group of orthologs #47. Best score 705 bits
Score difference with first non-orthologous sequence - C.reinhardtii:221 S.stipitis:705

A8J8K0              	100.00%		A3GI45              	100.00%
Bootstrap support for A8J8K0 as seed ortholog is 99%.
Bootstrap support for A3GI45 as seed ortholog is 100%.

Group of orthologs #48. Best score 705 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 S.stipitis:705

A8JA18              	100.00%		A3LYX5              	100.00%
Bootstrap support for A8JA18 as seed ortholog is 100%.
Bootstrap support for A3LYX5 as seed ortholog is 100%.

Group of orthologs #49. Best score 703 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:703

A8IQU3              	100.00%		A3LST8              	100.00%
Bootstrap support for A8IQU3 as seed ortholog is 99%.
Bootstrap support for A3LST8 as seed ortholog is 100%.

Group of orthologs #50. Best score 702 bits
Score difference with first non-orthologous sequence - C.reinhardtii:555 S.stipitis:702

A8I8N8              	100.00%		A3LU44              	100.00%
Bootstrap support for A8I8N8 as seed ortholog is 100%.
Bootstrap support for A3LU44 as seed ortholog is 100%.

Group of orthologs #51. Best score 701 bits
Score difference with first non-orthologous sequence - C.reinhardtii:701 S.stipitis:701

A8IVJ7              	100.00%		A3GGW5              	100.00%
Bootstrap support for A8IVJ7 as seed ortholog is 100%.
Bootstrap support for A3GGW5 as seed ortholog is 100%.

Group of orthologs #52. Best score 700 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 S.stipitis:700

A8J0R6              	100.00%		A3LRI3              	100.00%
Bootstrap support for A8J0R6 as seed ortholog is 99%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #53. Best score 698 bits
Score difference with first non-orthologous sequence - C.reinhardtii:698 S.stipitis:698

A8J3A4              	100.00%		A3GHV9              	100.00%
Bootstrap support for A8J3A4 as seed ortholog is 100%.
Bootstrap support for A3GHV9 as seed ortholog is 100%.

Group of orthologs #54. Best score 697 bits
Score difference with first non-orthologous sequence - C.reinhardtii:393 S.stipitis:537

A8IXZ0              	100.00%		A3LX42              	100.00%
Bootstrap support for A8IXZ0 as seed ortholog is 100%.
Bootstrap support for A3LX42 as seed ortholog is 100%.

Group of orthologs #55. Best score 696 bits
Score difference with first non-orthologous sequence - C.reinhardtii:696 S.stipitis:696

A8JEP9              	100.00%		A3M067              	100.00%
Bootstrap support for A8JEP9 as seed ortholog is 100%.
Bootstrap support for A3M067 as seed ortholog is 100%.

Group of orthologs #56. Best score 694 bits
Score difference with first non-orthologous sequence - C.reinhardtii:694 S.stipitis:694

A8J6S7              	100.00%		A3LPQ1              	100.00%
Bootstrap support for A8J6S7 as seed ortholog is 100%.
Bootstrap support for A3LPQ1 as seed ortholog is 100%.

Group of orthologs #57. Best score 675 bits
Score difference with first non-orthologous sequence - C.reinhardtii:675 S.stipitis:675

A8II42              	100.00%		A3LNN0              	100.00%
Bootstrap support for A8II42 as seed ortholog is 100%.
Bootstrap support for A3LNN0 as seed ortholog is 100%.

Group of orthologs #58. Best score 674 bits
Score difference with first non-orthologous sequence - C.reinhardtii:674 S.stipitis:674

A8J3Y6              	100.00%		A3LP60              	100.00%
Bootstrap support for A8J3Y6 as seed ortholog is 100%.
Bootstrap support for A3LP60 as seed ortholog is 100%.

Group of orthologs #59. Best score 667 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 S.stipitis:272

A8JAV1              	100.00%		A3GI55              	100.00%
Bootstrap support for A8JAV1 as seed ortholog is 100%.
Bootstrap support for A3GI55 as seed ortholog is 100%.

Group of orthologs #60. Best score 665 bits
Score difference with first non-orthologous sequence - C.reinhardtii:665 S.stipitis:327

A8JCA8              	100.00%		A3LU88              	100.00%
Bootstrap support for A8JCA8 as seed ortholog is 100%.
Bootstrap support for A3LU88 as seed ortholog is 100%.

Group of orthologs #61. Best score 663 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 S.stipitis:663

A8IH85              	100.00%		A3LRN4              	100.00%
Bootstrap support for A8IH85 as seed ortholog is 100%.
Bootstrap support for A3LRN4 as seed ortholog is 100%.

Group of orthologs #62. Best score 659 bits
Score difference with first non-orthologous sequence - C.reinhardtii:659 S.stipitis:659

A8IAC7              	100.00%		A3LPM4              	100.00%
Bootstrap support for A8IAC7 as seed ortholog is 100%.
Bootstrap support for A3LPM4 as seed ortholog is 100%.

Group of orthologs #63. Best score 659 bits
Score difference with first non-orthologous sequence - C.reinhardtii:591 S.stipitis:659

A8IIP9              	100.00%		A3LQE3              	100.00%
Bootstrap support for A8IIP9 as seed ortholog is 100%.
Bootstrap support for A3LQE3 as seed ortholog is 100%.

Group of orthologs #64. Best score 654 bits
Score difference with first non-orthologous sequence - C.reinhardtii:654 S.stipitis:654

A8IHX1              	100.00%		A3LQS2              	100.00%
A8HW52              	67.19%		
A8J2H1              	9.14%		
Bootstrap support for A8IHX1 as seed ortholog is 100%.
Bootstrap support for A3LQS2 as seed ortholog is 100%.

Group of orthologs #65. Best score 654 bits
Score difference with first non-orthologous sequence - C.reinhardtii:418 S.stipitis:513

Q540H1              	100.00%		A3LTP2              	100.00%
Bootstrap support for Q540H1 as seed ortholog is 100%.
Bootstrap support for A3LTP2 as seed ortholog is 100%.

Group of orthologs #66. Best score 653 bits
Score difference with first non-orthologous sequence - C.reinhardtii:653 S.stipitis:653

A8IX80              	100.00%		A3LQP2              	100.00%
Bootstrap support for A8IX80 as seed ortholog is 100%.
Bootstrap support for A3LQP2 as seed ortholog is 100%.

Group of orthologs #67. Best score 651 bits
Score difference with first non-orthologous sequence - C.reinhardtii:562 S.stipitis:651

A8HQ74              	100.00%		A3LZ90              	100.00%
Bootstrap support for A8HQ74 as seed ortholog is 100%.
Bootstrap support for A3LZ90 as seed ortholog is 100%.

Group of orthologs #68. Best score 651 bits
Score difference with first non-orthologous sequence - C.reinhardtii:651 S.stipitis:171

A8JH39              	100.00%		A3GFA2              	100.00%
Bootstrap support for A8JH39 as seed ortholog is 100%.
Bootstrap support for A3GFA2 as seed ortholog is 99%.

Group of orthologs #69. Best score 649 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 S.stipitis:372

A8J7C8              	100.00%		A3GEX5              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 100%.
Bootstrap support for A3GEX5 as seed ortholog is 100%.

Group of orthologs #70. Best score 647 bits
Score difference with first non-orthologous sequence - C.reinhardtii:564 S.stipitis:647

A8J7J2              	100.00%		A3LYE9              	100.00%
Bootstrap support for A8J7J2 as seed ortholog is 100%.
Bootstrap support for A3LYE9 as seed ortholog is 100%.

Group of orthologs #71. Best score 643 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 S.stipitis:248

A8JC09              	100.00%		A3LTX5              	100.00%
Bootstrap support for A8JC09 as seed ortholog is 100%.
Bootstrap support for A3LTX5 as seed ortholog is 100%.

Group of orthologs #72. Best score 639 bits
Score difference with first non-orthologous sequence - C.reinhardtii:468 S.stipitis:367

A8IV67              	100.00%		A3GFY8              	100.00%
Bootstrap support for A8IV67 as seed ortholog is 100%.
Bootstrap support for A3GFY8 as seed ortholog is 100%.

Group of orthologs #73. Best score 638 bits
Score difference with first non-orthologous sequence - C.reinhardtii:638 S.stipitis:638

A8IZE7              	100.00%		A3LUH0              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #74. Best score 636 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:552

A8IU68              	100.00%		A3LVX8              	100.00%
Bootstrap support for A8IU68 as seed ortholog is 89%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #75. Best score 633 bits
Score difference with first non-orthologous sequence - C.reinhardtii:633 S.stipitis:633

A8ICJ1              	100.00%		A3LU95              	100.00%
Bootstrap support for A8ICJ1 as seed ortholog is 100%.
Bootstrap support for A3LU95 as seed ortholog is 100%.

Group of orthologs #76. Best score 631 bits
Score difference with first non-orthologous sequence - C.reinhardtii:631 S.stipitis:631

A8I232              	100.00%		A3LVE2              	100.00%
Bootstrap support for A8I232 as seed ortholog is 100%.
Bootstrap support for A3LVE2 as seed ortholog is 100%.

Group of orthologs #77. Best score 621 bits
Score difference with first non-orthologous sequence - C.reinhardtii:621 S.stipitis:621

A8IVW3              	100.00%		A3LN88              	100.00%
Bootstrap support for A8IVW3 as seed ortholog is 100%.
Bootstrap support for A3LN88 as seed ortholog is 100%.

Group of orthologs #78. Best score 621 bits
Score difference with first non-orthologous sequence - C.reinhardtii:621 S.stipitis:494

A8IRW5              	100.00%		A3LZG4              	100.00%
Bootstrap support for A8IRW5 as seed ortholog is 100%.
Bootstrap support for A3LZG4 as seed ortholog is 100%.

Group of orthologs #79. Best score 619 bits
Score difference with first non-orthologous sequence - C.reinhardtii:525 S.stipitis:619

A8J524              	100.00%		A3LTV5              	100.00%
Bootstrap support for A8J524 as seed ortholog is 100%.
Bootstrap support for A3LTV5 as seed ortholog is 100%.

Group of orthologs #80. Best score 618 bits
Score difference with first non-orthologous sequence - C.reinhardtii:433 S.stipitis:247

A8IHB3              	100.00%		A3LNG1              	100.00%
Bootstrap support for A8IHB3 as seed ortholog is 100%.
Bootstrap support for A3LNG1 as seed ortholog is 100%.

Group of orthologs #81. Best score 615 bits
Score difference with first non-orthologous sequence - C.reinhardtii:615 S.stipitis:28

Q6X898              	100.00%		A3GHS7              	100.00%
Bootstrap support for Q6X898 as seed ortholog is 100%.
Bootstrap support for A3GHS7 as seed ortholog is 71%.
Alternative seed ortholog is A3LZ10 (28 bits away from this cluster)

Group of orthologs #82. Best score 614 bits
Score difference with first non-orthologous sequence - C.reinhardtii:509 S.stipitis:614

A8JCV8              	100.00%		A3LXD8              	100.00%
A8JCQ8              	35.29%		A3LW76              	31.09%
A8JFR9              	19.61%		
Bootstrap support for A8JCV8 as seed ortholog is 100%.
Bootstrap support for A3LXD8 as seed ortholog is 100%.

Group of orthologs #83. Best score 613 bits
Score difference with first non-orthologous sequence - C.reinhardtii:613 S.stipitis:613

A8J0N7              	100.00%		A3LS00              	100.00%
Bootstrap support for A8J0N7 as seed ortholog is 100%.
Bootstrap support for A3LS00 as seed ortholog is 100%.

Group of orthologs #84. Best score 611 bits
Score difference with first non-orthologous sequence - C.reinhardtii:611 S.stipitis:124

A8IAN1              	100.00%		P34736              	100.00%
Bootstrap support for A8IAN1 as seed ortholog is 100%.
Bootstrap support for P34736 as seed ortholog is 99%.

Group of orthologs #85. Best score 608 bits
Score difference with first non-orthologous sequence - C.reinhardtii:608 S.stipitis:608

A8II71              	100.00%		A3LPC5              	100.00%
Bootstrap support for A8II71 as seed ortholog is 100%.
Bootstrap support for A3LPC5 as seed ortholog is 100%.

Group of orthologs #86. Best score 606 bits
Score difference with first non-orthologous sequence - C.reinhardtii:543 S.stipitis:606

A8JE04              	100.00%		A3GGF2              	100.00%
Bootstrap support for A8JE04 as seed ortholog is 100%.
Bootstrap support for A3GGF2 as seed ortholog is 100%.

Group of orthologs #87. Best score 604 bits
Score difference with first non-orthologous sequence - C.reinhardtii:372 S.stipitis:604

A8I0G3              	100.00%		A3LTZ2              	100.00%
Bootstrap support for A8I0G3 as seed ortholog is 100%.
Bootstrap support for A3LTZ2 as seed ortholog is 100%.

Group of orthologs #88. Best score 604 bits
Score difference with first non-orthologous sequence - C.reinhardtii:604 S.stipitis:604

A8IG58              	100.00%		A3LTI7              	100.00%
Bootstrap support for A8IG58 as seed ortholog is 100%.
Bootstrap support for A3LTI7 as seed ortholog is 100%.

Group of orthologs #89. Best score 602 bits
Score difference with first non-orthologous sequence - C.reinhardtii:602 S.stipitis:602

A8J189              	100.00%		A3GHG4              	100.00%
Bootstrap support for A8J189 as seed ortholog is 100%.
Bootstrap support for A3GHG4 as seed ortholog is 100%.

Group of orthologs #90. Best score 602 bits
Score difference with first non-orthologous sequence - C.reinhardtii:602 S.stipitis:365

A8JF35              	100.00%		A3LWB3              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for A3LWB3 as seed ortholog is 100%.

Group of orthologs #91. Best score 600 bits
Score difference with first non-orthologous sequence - C.reinhardtii:600 S.stipitis:600

A8IGM5              	100.00%		A3LN60              	100.00%
Bootstrap support for A8IGM5 as seed ortholog is 100%.
Bootstrap support for A3LN60 as seed ortholog is 100%.

Group of orthologs #92. Best score 598 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 S.stipitis:263

A8HQA8              	100.00%		A3LQW7              	100.00%
Bootstrap support for A8HQA8 as seed ortholog is 100%.
Bootstrap support for A3LQW7 as seed ortholog is 100%.

Group of orthologs #93. Best score 598 bits
Score difference with first non-orthologous sequence - C.reinhardtii:598 S.stipitis:598

Q8VZZ5              	100.00%		A3GG50              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for A3GG50 as seed ortholog is 100%.

Group of orthologs #94. Best score 594 bits
Score difference with first non-orthologous sequence - C.reinhardtii:389 S.stipitis:411

A8IT25              	100.00%		A3LWX3              	100.00%
Bootstrap support for A8IT25 as seed ortholog is 100%.
Bootstrap support for A3LWX3 as seed ortholog is 100%.

Group of orthologs #95. Best score 593 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 S.stipitis:320

A8IJV9              	100.00%		A3LP26              	100.00%
A8IZL7              	43.88%		
A8IS11              	37.65%		
A8J0V2              	32.19%		
Bootstrap support for A8IJV9 as seed ortholog is 100%.
Bootstrap support for A3LP26 as seed ortholog is 99%.

Group of orthologs #96. Best score 593 bits
Score difference with first non-orthologous sequence - C.reinhardtii:593 S.stipitis:593

A8J4W8              	100.00%		A3GEZ1              	100.00%
Bootstrap support for A8J4W8 as seed ortholog is 100%.
Bootstrap support for A3GEZ1 as seed ortholog is 100%.

Group of orthologs #97. Best score 592 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 S.stipitis:592

A8IDL8              	100.00%		A3LR24              	100.00%
Bootstrap support for A8IDL8 as seed ortholog is 100%.
Bootstrap support for A3LR24 as seed ortholog is 100%.

Group of orthologs #98. Best score 585 bits
Score difference with first non-orthologous sequence - C.reinhardtii:585 S.stipitis:585

A8I793              	100.00%		A3LWA8              	100.00%
Bootstrap support for A8I793 as seed ortholog is 100%.
Bootstrap support for A3LWA8 as seed ortholog is 100%.

Group of orthologs #99. Best score 582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:582 S.stipitis:582

A8J014              	100.00%		A3GEY9              	100.00%
Bootstrap support for A8J014 as seed ortholog is 100%.
Bootstrap support for A3GEY9 as seed ortholog is 100%.

Group of orthologs #100. Best score 582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 S.stipitis:204

A8J040              	100.00%		A3LVD6              	100.00%
Bootstrap support for A8J040 as seed ortholog is 99%.
Bootstrap support for A3LVD6 as seed ortholog is 99%.

Group of orthologs #101. Best score 581 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:581

A8HPT4              	100.00%		A3LNZ1              	100.00%
                    	       		A3LMU7              	16.41%
Bootstrap support for A8HPT4 as seed ortholog is 99%.
Bootstrap support for A3LNZ1 as seed ortholog is 100%.

Group of orthologs #102. Best score 578 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 S.stipitis:578

A8IMK1              	100.00%		A3LXU1              	100.00%
Bootstrap support for A8IMK1 as seed ortholog is 99%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #103. Best score 576 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 S.stipitis:4

Q8W4V3              	100.00%		A3LRJ3              	100.00%
Bootstrap support for Q8W4V3 as seed ortholog is 97%.
Bootstrap support for A3LRJ3 as seed ortholog is 53%.
Alternative seed ortholog is A3LY87 (4 bits away from this cluster)

Group of orthologs #104. Best score 573 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 S.stipitis:284

A8IIP7              	100.00%		A3GEY5              	100.00%
Bootstrap support for A8IIP7 as seed ortholog is 100%.
Bootstrap support for A3GEY5 as seed ortholog is 100%.

Group of orthologs #105. Best score 572 bits
Score difference with first non-orthologous sequence - C.reinhardtii:572 S.stipitis:572

A8IED9              	100.00%		A3GFP7              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for A3GFP7 as seed ortholog is 100%.

Group of orthologs #106. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:567 S.stipitis:567

A8IDE6              	100.00%		A3GI74              	100.00%
Bootstrap support for A8IDE6 as seed ortholog is 100%.
Bootstrap support for A3GI74 as seed ortholog is 100%.

Group of orthologs #107. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 S.stipitis:296

A8HVM3              	100.00%		A3LWK8              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 100%.

Group of orthologs #108. Best score 562 bits
Score difference with first non-orthologous sequence - C.reinhardtii:562 S.stipitis:562

A8J9S7              	100.00%		A3LT36              	100.00%
                    	       		A3LR11              	20.86%
Bootstrap support for A8J9S7 as seed ortholog is 100%.
Bootstrap support for A3LT36 as seed ortholog is 100%.

Group of orthologs #109. Best score 562 bits
Score difference with first non-orthologous sequence - C.reinhardtii:335 S.stipitis:562

A8HPZ4              	100.00%		A3LW17              	100.00%
Bootstrap support for A8HPZ4 as seed ortholog is 100%.
Bootstrap support for A3LW17 as seed ortholog is 100%.

Group of orthologs #110. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:389 S.stipitis:270

A8IR41              	100.00%		A3M0A5              	100.00%
Bootstrap support for A8IR41 as seed ortholog is 100%.
Bootstrap support for A3M0A5 as seed ortholog is 100%.

Group of orthologs #111. Best score 554 bits
Score difference with first non-orthologous sequence - C.reinhardtii:554 S.stipitis:554

A8JG58              	100.00%		A3GFY3              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for A3GFY3 as seed ortholog is 100%.

Group of orthologs #112. Best score 554 bits
Score difference with first non-orthologous sequence - C.reinhardtii:554 S.stipitis:554

Q6V9A8              	100.00%		A3LY35              	100.00%
Bootstrap support for Q6V9A8 as seed ortholog is 100%.
Bootstrap support for A3LY35 as seed ortholog is 100%.

Group of orthologs #113. Best score 553 bits
Score difference with first non-orthologous sequence - C.reinhardtii:419 S.stipitis:413

A8I9J2              	100.00%		A3LTI4              	100.00%
Bootstrap support for A8I9J2 as seed ortholog is 100%.
Bootstrap support for A3LTI4 as seed ortholog is 100%.

Group of orthologs #114. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 S.stipitis:545

A8JEV6              	100.00%		A3LP29              	100.00%
Bootstrap support for A8JEV6 as seed ortholog is 100%.
Bootstrap support for A3LP29 as seed ortholog is 100%.

Group of orthologs #115. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:545 S.stipitis:545

A8JH98              	100.00%		A3LQD6              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #116. Best score 544 bits
Score difference with first non-orthologous sequence - C.reinhardtii:544 S.stipitis:544

A8I8V5              	100.00%		A3LNS2              	100.00%
Bootstrap support for A8I8V5 as seed ortholog is 100%.
Bootstrap support for A3LNS2 as seed ortholog is 100%.

Group of orthologs #117. Best score 542 bits
Score difference with first non-orthologous sequence - C.reinhardtii:542 S.stipitis:542

A8JG07              	100.00%		A3LTZ7              	100.00%
Bootstrap support for A8JG07 as seed ortholog is 100%.
Bootstrap support for A3LTZ7 as seed ortholog is 100%.

Group of orthologs #118. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 S.stipitis:201

A8IDJ7              	100.00%		A3LXK9              	100.00%
Bootstrap support for A8IDJ7 as seed ortholog is 99%.
Bootstrap support for A3LXK9 as seed ortholog is 99%.

Group of orthologs #119. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 S.stipitis:343

A8JBN7              	100.00%		A3GFV3              	100.00%
Bootstrap support for A8JBN7 as seed ortholog is 100%.
Bootstrap support for A3GFV3 as seed ortholog is 100%.

Group of orthologs #120. Best score 537 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 S.stipitis:289

A8I675              	100.00%		A3LNR6              	100.00%
Bootstrap support for A8I675 as seed ortholog is 100%.
Bootstrap support for A3LNR6 as seed ortholog is 100%.

Group of orthologs #121. Best score 535 bits
Score difference with first non-orthologous sequence - C.reinhardtii:535 S.stipitis:493

A8HPT8              	100.00%		A3M058              	100.00%
                    	       		A3GEV9              	48.67%
Bootstrap support for A8HPT8 as seed ortholog is 100%.
Bootstrap support for A3M058 as seed ortholog is 100%.

Group of orthologs #122. Best score 535 bits
Score difference with first non-orthologous sequence - C.reinhardtii:535 S.stipitis:535

A8ID84              	100.00%		A3LU50              	100.00%
Bootstrap support for A8ID84 as seed ortholog is 100%.
Bootstrap support for A3LU50 as seed ortholog is 100%.

Group of orthologs #123. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 S.stipitis:534

A8IPH5              	100.00%		A3LT63              	100.00%
Bootstrap support for A8IPH5 as seed ortholog is 100%.
Bootstrap support for A3LT63 as seed ortholog is 100%.

Group of orthologs #124. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 S.stipitis:128

Q9XGU3              	100.00%		A3LZ03              	100.00%
Bootstrap support for Q9XGU3 as seed ortholog is 100%.
Bootstrap support for A3LZ03 as seed ortholog is 100%.

Group of orthologs #125. Best score 533 bits
Score difference with first non-orthologous sequence - C.reinhardtii:434 S.stipitis:468

P26526              	100.00%		A3GGR8              	100.00%
Bootstrap support for P26526 as seed ortholog is 100%.
Bootstrap support for A3GGR8 as seed ortholog is 100%.

Group of orthologs #126. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:532 S.stipitis:370

A8I175              	100.00%		A3GI18              	100.00%
Bootstrap support for A8I175 as seed ortholog is 100%.
Bootstrap support for A3GI18 as seed ortholog is 100%.

Group of orthologs #127. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 S.stipitis:532

A8J1T4              	100.00%		A3LYY5              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 100%.
Bootstrap support for A3LYY5 as seed ortholog is 100%.

Group of orthologs #128. Best score 531 bits
Score difference with first non-orthologous sequence - C.reinhardtii:531 S.stipitis:531

A8J8Z1              	100.00%		A3LQX4              	100.00%
Bootstrap support for A8J8Z1 as seed ortholog is 100%.
Bootstrap support for A3LQX4 as seed ortholog is 100%.

Group of orthologs #129. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:530 S.stipitis:530

A8JHE3              	100.00%		A3GF17              	100.00%
Bootstrap support for A8JHE3 as seed ortholog is 100%.
Bootstrap support for A3GF17 as seed ortholog is 100%.

Group of orthologs #130. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 S.stipitis:527

A8I6G3              	100.00%		A3GHX5              	100.00%
Bootstrap support for A8I6G3 as seed ortholog is 100%.
Bootstrap support for A3GHX5 as seed ortholog is 100%.

Group of orthologs #131. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 S.stipitis:527

A8IE89              	100.00%		A3LW22              	100.00%
Bootstrap support for A8IE89 as seed ortholog is 99%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #132. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 S.stipitis:241

A8J3N3              	100.00%		A3LQ55              	100.00%
Bootstrap support for A8J3N3 as seed ortholog is 100%.
Bootstrap support for A3LQ55 as seed ortholog is 100%.

Group of orthologs #133. Best score 526 bits
Score difference with first non-orthologous sequence - C.reinhardtii:526 S.stipitis:526

A8JH25              	100.00%		A3LP53              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 100%.
Bootstrap support for A3LP53 as seed ortholog is 100%.

Group of orthologs #134. Best score 526 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 S.stipitis:526

A8JHC9              	100.00%		A3M0F2              	100.00%
Bootstrap support for A8JHC9 as seed ortholog is 100%.
Bootstrap support for A3M0F2 as seed ortholog is 100%.

Group of orthologs #135. Best score 525 bits
Score difference with first non-orthologous sequence - C.reinhardtii:525 S.stipitis:280

A8IEL6              	100.00%		A3GEU5              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for A3GEU5 as seed ortholog is 100%.

Group of orthologs #136. Best score 524 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 S.stipitis:375

A8IIS1              	100.00%		A3LQB6              	100.00%
Bootstrap support for A8IIS1 as seed ortholog is 100%.
Bootstrap support for A3LQB6 as seed ortholog is 100%.

Group of orthologs #137. Best score 523 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 S.stipitis:523

A8J0X7              	100.00%		A3M0K6              	100.00%
Bootstrap support for A8J0X7 as seed ortholog is 100%.
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #138. Best score 521 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:521

A8J6S4              	100.00%		A3LRL2              	100.00%
Bootstrap support for A8J6S4 as seed ortholog is 98%.
Bootstrap support for A3LRL2 as seed ortholog is 100%.

Group of orthologs #139. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:520 S.stipitis:520

A8HYL9              	100.00%		A3LUI1              	100.00%
                    	       		A3GFS9              	16.11%
Bootstrap support for A8HYL9 as seed ortholog is 100%.
Bootstrap support for A3LUI1 as seed ortholog is 100%.

Group of orthologs #140. Best score 519 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 S.stipitis:444

A8IBN3              	100.00%		A3LY68              	100.00%
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for A3LY68 as seed ortholog is 100%.

Group of orthologs #141. Best score 518 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:93

A8IHD9              	100.00%		A3LP11              	100.00%
Bootstrap support for A8IHD9 as seed ortholog is 93%.
Bootstrap support for A3LP11 as seed ortholog is 97%.

Group of orthologs #142. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:517 S.stipitis:517

A8I0Z4              	100.00%		A3LPZ4              	100.00%
Bootstrap support for A8I0Z4 as seed ortholog is 100%.
Bootstrap support for A3LPZ4 as seed ortholog is 100%.

Group of orthologs #143. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:375 S.stipitis:152

A8IA39              	100.00%		A3GHT9              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for A3GHT9 as seed ortholog is 99%.

Group of orthologs #144. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 S.stipitis:354

A8JIJ1              	100.00%		A3LST5              	100.00%
Bootstrap support for A8JIJ1 as seed ortholog is 100%.
Bootstrap support for A3LST5 as seed ortholog is 100%.

Group of orthologs #145. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:514 S.stipitis:514

A8JIR0              	100.00%		A3M0G6              	100.00%
Bootstrap support for A8JIR0 as seed ortholog is 100%.
Bootstrap support for A3M0G6 as seed ortholog is 100%.

Group of orthologs #146. Best score 511 bits
Score difference with first non-orthologous sequence - C.reinhardtii:511 S.stipitis:511

A8HRS5              	100.00%		A3LP93              	100.00%
                    	       		A3LZQ8              	47.65%
Bootstrap support for A8HRS5 as seed ortholog is 100%.
Bootstrap support for A3LP93 as seed ortholog is 100%.

Group of orthologs #147. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 S.stipitis:507

A8J5K4              	100.00%		A3GGX7              	100.00%
Bootstrap support for A8J5K4 as seed ortholog is 100%.
Bootstrap support for A3GGX7 as seed ortholog is 100%.

Group of orthologs #148. Best score 505 bits
Score difference with first non-orthologous sequence - C.reinhardtii:505 S.stipitis:505

A8IST3              	100.00%		A3GF60              	100.00%
A8J1K0              	41.48%		A3LUS8              	24.35%
A8J9X3              	29.30%		
Bootstrap support for A8IST3 as seed ortholog is 100%.
Bootstrap support for A3GF60 as seed ortholog is 100%.

Group of orthologs #149. Best score 502 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 S.stipitis:502

A8HS40              	100.00%		A3GFA4              	100.00%
Bootstrap support for A8HS40 as seed ortholog is 99%.
Bootstrap support for A3GFA4 as seed ortholog is 100%.

Group of orthologs #150. Best score 500 bits
Score difference with first non-orthologous sequence - C.reinhardtii:500 S.stipitis:500

A8IJJ8              	100.00%		A3GHI9              	100.00%
Bootstrap support for A8IJJ8 as seed ortholog is 100%.
Bootstrap support for A3GHI9 as seed ortholog is 100%.

Group of orthologs #151. Best score 500 bits
Score difference with first non-orthologous sequence - C.reinhardtii:500 S.stipitis:500

A8JH35              	100.00%		A3LX99              	100.00%
Bootstrap support for A8JH35 as seed ortholog is 100%.
Bootstrap support for A3LX99 as seed ortholog is 100%.

Group of orthologs #152. Best score 499 bits
Score difference with first non-orthologous sequence - C.reinhardtii:499 S.stipitis:499

A8IM71              	100.00%		A3GG22              	100.00%
Bootstrap support for A8IM71 as seed ortholog is 100%.
Bootstrap support for A3GG22 as seed ortholog is 100%.

Group of orthologs #153. Best score 498 bits
Score difference with first non-orthologous sequence - C.reinhardtii:498 S.stipitis:498

A8JH37              	100.00%		A3LVA0              	100.00%
Bootstrap support for A8JH37 as seed ortholog is 100%.
Bootstrap support for A3LVA0 as seed ortholog is 100%.

Group of orthologs #154. Best score 496 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 S.stipitis:496

A8HYC0              	100.00%		A3GH45              	100.00%
Bootstrap support for A8HYC0 as seed ortholog is 100%.
Bootstrap support for A3GH45 as seed ortholog is 100%.

Group of orthologs #155. Best score 496 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 S.stipitis:304

A8J3L9              	100.00%		A3GF71              	100.00%
Bootstrap support for A8J3L9 as seed ortholog is 100%.
Bootstrap support for A3GF71 as seed ortholog is 100%.

Group of orthologs #156. Best score 492 bits
Score difference with first non-orthologous sequence - C.reinhardtii:492 S.stipitis:492

A8ID74              	100.00%		A3LXF0              	100.00%
Bootstrap support for A8ID74 as seed ortholog is 100%.
Bootstrap support for A3LXF0 as seed ortholog is 100%.

Group of orthologs #157. Best score 487 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 S.stipitis:297

A8IP17              	100.00%		A3GFI4              	100.00%
Bootstrap support for A8IP17 as seed ortholog is 100%.
Bootstrap support for A3GFI4 as seed ortholog is 100%.

Group of orthologs #158. Best score 486 bits
Score difference with first non-orthologous sequence - C.reinhardtii:486 S.stipitis:486

A8IXE0              	100.00%		A3LNU0              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for A3LNU0 as seed ortholog is 100%.

Group of orthologs #159. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 S.stipitis:485

A8J6K6              	100.00%		A3LNY6              	100.00%
                    	       		A3LZD2              	7.12%
Bootstrap support for A8J6K6 as seed ortholog is 99%.
Bootstrap support for A3LNY6 as seed ortholog is 100%.

Group of orthologs #160. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:485 S.stipitis:485

A8HYU5              	100.00%		A3LNJ6              	100.00%
Bootstrap support for A8HYU5 as seed ortholog is 100%.
Bootstrap support for A3LNJ6 as seed ortholog is 100%.

Group of orthologs #161. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 S.stipitis:149

A8IYG8              	100.00%		A3LT94              	100.00%
Bootstrap support for A8IYG8 as seed ortholog is 100%.
Bootstrap support for A3LT94 as seed ortholog is 100%.

Group of orthologs #162. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:423 S.stipitis:321

A8J1X8              	100.00%		A3LQU4              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 100%.
Bootstrap support for A3LQU4 as seed ortholog is 100%.

Group of orthologs #163. Best score 484 bits
Score difference with first non-orthologous sequence - C.reinhardtii:484 S.stipitis:484

A8I9M8              	100.00%		A3LZC1              	100.00%
Bootstrap support for A8I9M8 as seed ortholog is 100%.
Bootstrap support for A3LZC1 as seed ortholog is 100%.

Group of orthologs #164. Best score 484 bits
Score difference with first non-orthologous sequence - C.reinhardtii:484 S.stipitis:484

A8JES3              	100.00%		A3LVT5              	100.00%
Bootstrap support for A8JES3 as seed ortholog is 100%.
Bootstrap support for A3LVT5 as seed ortholog is 100%.

Group of orthologs #165. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 S.stipitis:249

A8J3P5              	100.00%		A3GFS0              	100.00%
Bootstrap support for A8J3P5 as seed ortholog is 99%.
Bootstrap support for A3GFS0 as seed ortholog is 100%.

Group of orthologs #166. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:483 S.stipitis:483

A8JAG5              	100.00%		A3M0F1              	100.00%
Bootstrap support for A8JAG5 as seed ortholog is 100%.
Bootstrap support for A3M0F1 as seed ortholog is 100%.

Group of orthologs #167. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:355 S.stipitis:380

P17746              	100.00%		A3LX50              	100.00%
Bootstrap support for P17746 as seed ortholog is 100%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #168. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 S.stipitis:410

A8J9Q1              	100.00%		A3LWL5              	100.00%
Bootstrap support for A8J9Q1 as seed ortholog is 100%.
Bootstrap support for A3LWL5 as seed ortholog is 100%.

Group of orthologs #169. Best score 477 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:33

A8IJ19              	100.00%		A3LNE3              	100.00%
Bootstrap support for A8IJ19 as seed ortholog is 99%.
Bootstrap support for A3LNE3 as seed ortholog is 77%.

Group of orthologs #170. Best score 477 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 S.stipitis:323

A8IAJ1              	100.00%		A3LVF1              	100.00%
Bootstrap support for A8IAJ1 as seed ortholog is 100%.
Bootstrap support for A3LVF1 as seed ortholog is 100%.

Group of orthologs #171. Best score 477 bits
Score difference with first non-orthologous sequence - C.reinhardtii:477 S.stipitis:477

Q84UB2              	100.00%		A3LQ84              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for A3LQ84 as seed ortholog is 100%.

Group of orthologs #172. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:158

A8JBP0              	100.00%		A3LP07              	100.00%
Bootstrap support for A8JBP0 as seed ortholog is 99%.
Bootstrap support for A3LP07 as seed ortholog is 100%.

Group of orthologs #173. Best score 475 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 S.stipitis:75

A8J122              	100.00%		A3GHM9              	100.00%
                    	       		A3LR07              	49.91%
Bootstrap support for A8J122 as seed ortholog is 45%.
Alternative seed ortholog is A8J3G7 (3 bits away from this cluster)
Bootstrap support for A3GHM9 as seed ortholog is 97%.

Group of orthologs #174. Best score 475 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:149

A8I542              	100.00%		A3M0L3              	100.00%
Bootstrap support for A8I542 as seed ortholog is 74%.
Alternative seed ortholog is A8J4M6 (67 bits away from this cluster)
Bootstrap support for A3M0L3 as seed ortholog is 93%.

Group of orthologs #175. Best score 474 bits
Score difference with first non-orthologous sequence - C.reinhardtii:474 S.stipitis:102

A8JGG6              	100.00%		A3GG30              	100.00%
A8JGG7              	70.93%		
A8IPZ9              	51.87%		
Bootstrap support for A8JGG6 as seed ortholog is 100%.
Bootstrap support for A3GG30 as seed ortholog is 97%.

Group of orthologs #176. Best score 474 bits
Score difference with first non-orthologous sequence - C.reinhardtii:474 S.stipitis:474

A8ISE2              	100.00%		A3LUA0              	100.00%
Bootstrap support for A8ISE2 as seed ortholog is 100%.
Bootstrap support for A3LUA0 as seed ortholog is 100%.

Group of orthologs #177. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:472 S.stipitis:472

A8JCR1              	100.00%		A3LRP2              	100.00%
Bootstrap support for A8JCR1 as seed ortholog is 100%.
Bootstrap support for A3LRP2 as seed ortholog is 100%.

Group of orthologs #178. Best score 471 bits
Score difference with first non-orthologous sequence - C.reinhardtii:471 S.stipitis:471

A8IW34              	100.00%		A3LYS9              	100.00%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for A3LYS9 as seed ortholog is 100%.

Group of orthologs #179. Best score 469 bits
Score difference with first non-orthologous sequence - C.reinhardtii:469 S.stipitis:374

A8J146              	100.00%		A3LWP1              	100.00%
Bootstrap support for A8J146 as seed ortholog is 100%.
Bootstrap support for A3LWP1 as seed ortholog is 100%.

Group of orthologs #180. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 S.stipitis:467

A8IFZ9              	100.00%		A3GH63              	100.00%
Bootstrap support for A8IFZ9 as seed ortholog is 100%.
Bootstrap support for A3GH63 as seed ortholog is 100%.

Group of orthologs #181. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 S.stipitis:228

A8IFK0              	100.00%		A3LP36              	100.00%
A8IFH0              	45.27%		
Bootstrap support for A8IFK0 as seed ortholog is 86%.
Bootstrap support for A3LP36 as seed ortholog is 99%.

Group of orthologs #182. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:330 S.stipitis:389

A8J1B6              	100.00%		A3LZD4              	100.00%
                    	       		A3LUG5              	49.63%
Bootstrap support for A8J1B6 as seed ortholog is 100%.
Bootstrap support for A3LZD4 as seed ortholog is 100%.

Group of orthologs #183. Best score 464 bits
Score difference with first non-orthologous sequence - C.reinhardtii:464 S.stipitis:338

A8HME6              	100.00%		A3LXL0              	100.00%
Bootstrap support for A8HME6 as seed ortholog is 100%.
Bootstrap support for A3LXL0 as seed ortholog is 100%.

Group of orthologs #184. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:109

A8HYH7              	100.00%		A3LPM3              	100.00%
Bootstrap support for A8HYH7 as seed ortholog is 98%.
Bootstrap support for A3LPM3 as seed ortholog is 99%.

Group of orthologs #185. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:458 S.stipitis:458

A8IID0              	100.00%		A3LUT0              	100.00%
Bootstrap support for A8IID0 as seed ortholog is 100%.
Bootstrap support for A3LUT0 as seed ortholog is 100%.

Group of orthologs #186. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:458 S.stipitis:458

A8JAP7              	100.00%		A3LW02              	100.00%
Bootstrap support for A8JAP7 as seed ortholog is 100%.
Bootstrap support for A3LW02 as seed ortholog is 100%.

Group of orthologs #187. Best score 457 bits
Score difference with first non-orthologous sequence - C.reinhardtii:457 S.stipitis:457

A8ITK3              	100.00%		A3LRJ9              	100.00%
Bootstrap support for A8ITK3 as seed ortholog is 100%.
Bootstrap support for A3LRJ9 as seed ortholog is 100%.

Group of orthologs #188. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 S.stipitis:456

A8IF08              	100.00%		A3GFA7              	100.00%
Bootstrap support for A8IF08 as seed ortholog is 100%.
Bootstrap support for A3GFA7 as seed ortholog is 100%.

Group of orthologs #189. Best score 455 bits
Score difference with first non-orthologous sequence - C.reinhardtii:455 S.stipitis:455

A8J168              	100.00%		A3LRA4              	100.00%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for A3LRA4 as seed ortholog is 100%.

Group of orthologs #190. Best score 454 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 S.stipitis:454

A8JHR9              	100.00%		A3LQ70              	100.00%
                    	       		A3LZZ7              	50.72%
                    	       		A3LNP7              	44.93%
Bootstrap support for A8JHR9 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #191. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 S.stipitis:135

A8JDN1              	100.00%		A3M0C2              	100.00%
Bootstrap support for A8JDN1 as seed ortholog is 100%.
Bootstrap support for A3M0C2 as seed ortholog is 100%.

Group of orthologs #192. Best score 450 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 S.stipitis:223

A8J280              	100.00%		A3LU23              	100.00%
Bootstrap support for A8J280 as seed ortholog is 100%.
Bootstrap support for A3LU23 as seed ortholog is 100%.

Group of orthologs #193. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:248

A8IBD5              	100.00%		A3GI51              	100.00%
Bootstrap support for A8IBD5 as seed ortholog is 94%.
Bootstrap support for A3GI51 as seed ortholog is 100%.

Group of orthologs #194. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:447 S.stipitis:393

A8HVL4              	100.00%		A3M089              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 100%.
Bootstrap support for A3M089 as seed ortholog is 100%.

Group of orthologs #195. Best score 445 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:30

A8JF80              	100.00%		A3GID5              	100.00%
Bootstrap support for A8JF80 as seed ortholog is 99%.
Bootstrap support for A3GID5 as seed ortholog is 81%.

Group of orthologs #196. Best score 444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:204

A8IT38              	100.00%		A3LRI6              	100.00%
A8J8F1              	100.00%		A3LZU3              	100.00%
A8IT35              	60.56%		A3LUN9              	54.88%
A8J6J3              	33.88%		A3LMR6              	52.85%
A8IZY4              	31.00%		A3LTM4              	51.24%
A8IYV1              	9.88%		
A8J6T8              	5.80%		
Bootstrap support for A8IT38 as seed ortholog is 99%.
Bootstrap support for A8J8F1 as seed ortholog is 99%.
Bootstrap support for A3LRI6 as seed ortholog is 99%.
Bootstrap support for A3LZU3 as seed ortholog is 98%.

Group of orthologs #197. Best score 444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 S.stipitis:444

A8ILR9              	100.00%		A3LNC1              	100.00%
Bootstrap support for A8ILR9 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #198. Best score 444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 S.stipitis:61

A8IAY6              	100.00%		A3LUC7              	100.00%
Bootstrap support for A8IAY6 as seed ortholog is 100%.
Bootstrap support for A3LUC7 as seed ortholog is 86%.

Group of orthologs #199. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 S.stipitis:441

A8HP93              	100.00%		A3LTI6              	100.00%
Bootstrap support for A8HP93 as seed ortholog is 100%.
Bootstrap support for A3LTI6 as seed ortholog is 100%.

Group of orthologs #200. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:440 S.stipitis:440

A8J5F7              	100.00%		A3GI40              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for A3GI40 as seed ortholog is 100%.

Group of orthologs #201. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 S.stipitis:440

A8JGK6              	100.00%		A3LW19              	100.00%
Bootstrap support for A8JGK6 as seed ortholog is 99%.
Bootstrap support for A3LW19 as seed ortholog is 100%.

Group of orthologs #202. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 S.stipitis:162

A8IIL1              	100.00%		A3GGG1              	100.00%
A8JDP0              	5.20%		
Bootstrap support for A8IIL1 as seed ortholog is 98%.
Bootstrap support for A3GGG1 as seed ortholog is 99%.

Group of orthologs #203. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 S.stipitis:187

A8HXA2              	100.00%		A3LQP0              	100.00%
Bootstrap support for A8HXA2 as seed ortholog is 99%.
Bootstrap support for A3LQP0 as seed ortholog is 100%.

Group of orthologs #204. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 S.stipitis:281

A8IY20              	100.00%		A3GI80              	100.00%
Bootstrap support for A8IY20 as seed ortholog is 100%.
Bootstrap support for A3GI80 as seed ortholog is 100%.

Group of orthologs #205. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:438 S.stipitis:438

A8J3N8              	100.00%		A3LQX8              	100.00%
Bootstrap support for A8J3N8 as seed ortholog is 100%.
Bootstrap support for A3LQX8 as seed ortholog is 100%.

Group of orthologs #206. Best score 437 bits
Score difference with first non-orthologous sequence - C.reinhardtii:437 S.stipitis:437

A8IUN1              	100.00%		A3LRK4              	100.00%
Bootstrap support for A8IUN1 as seed ortholog is 100%.
Bootstrap support for A3LRK4 as seed ortholog is 100%.

Group of orthologs #207. Best score 435 bits
Score difference with first non-orthologous sequence - C.reinhardtii:435 S.stipitis:435

A8IA86              	100.00%		A3GEZ8              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for A3GEZ8 as seed ortholog is 100%.

Group of orthologs #208. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:156

A8I985              	100.00%		A3LRW3              	100.00%
Bootstrap support for A8I985 as seed ortholog is 99%.
Bootstrap support for A3LRW3 as seed ortholog is 99%.

Group of orthologs #209. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:430 S.stipitis:430

A8IJG8              	100.00%		A3LPS9              	100.00%
Bootstrap support for A8IJG8 as seed ortholog is 100%.
Bootstrap support for A3LPS9 as seed ortholog is 100%.

Group of orthologs #210. Best score 429 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 S.stipitis:210

A8ICS4              	100.00%		A3LSN3              	100.00%
Bootstrap support for A8ICS4 as seed ortholog is 99%.
Bootstrap support for A3LSN3 as seed ortholog is 99%.

Group of orthologs #211. Best score 427 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 S.stipitis:378

A8HP46              	100.00%		A3GHC7              	100.00%
Bootstrap support for A8HP46 as seed ortholog is 100%.
Bootstrap support for A3GHC7 as seed ortholog is 100%.

Group of orthologs #212. Best score 427 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 S.stipitis:237

A8IRT6              	100.00%		A3LUE7              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for A3LUE7 as seed ortholog is 100%.

Group of orthologs #213. Best score 427 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 S.stipitis:427

A8J5U1              	100.00%		A3GHY8              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for A3GHY8 as seed ortholog is 100%.

Group of orthologs #214. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 S.stipitis:426

A8IBR6              	100.00%		A3LWW5              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for A3LWW5 as seed ortholog is 100%.

Group of orthologs #215. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 S.stipitis:426

A8J1D2              	100.00%		A3LRI0              	100.00%
Bootstrap support for A8J1D2 as seed ortholog is 100%.
Bootstrap support for A3LRI0 as seed ortholog is 100%.

Group of orthologs #216. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:218

A8IJV1              	100.00%		A3LS22              	100.00%
Bootstrap support for A8IJV1 as seed ortholog is 99%.
Bootstrap support for A3LS22 as seed ortholog is 100%.

Group of orthologs #217. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 S.stipitis:143

A8IMP0              	100.00%		A3LXC5              	100.00%
Bootstrap support for A8IMP0 as seed ortholog is 100%.
Bootstrap support for A3LXC5 as seed ortholog is 100%.

Group of orthologs #218. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:69

A8JBB5              	100.00%		A3LVL5              	100.00%
A8J829              	5.42%		
Bootstrap support for A8JBB5 as seed ortholog is 93%.
Bootstrap support for A3LVL5 as seed ortholog is 93%.

Group of orthologs #219. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 S.stipitis:347

A8JFR4              	100.00%		A3LSS9              	100.00%
Bootstrap support for A8JFR4 as seed ortholog is 100%.
Bootstrap support for A3LSS9 as seed ortholog is 100%.

Group of orthologs #220. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:360 S.stipitis:298

A8J3F9              	100.00%		A3GET1              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 100%.
Bootstrap support for A3GET1 as seed ortholog is 100%.

Group of orthologs #221. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 S.stipitis:413

A8HT27              	100.00%		A3GFC1              	100.00%
A8IWZ7              	15.01%		A3LR89              	41.57%
                    	       		A3GH41              	39.61%
Bootstrap support for A8HT27 as seed ortholog is 100%.
Bootstrap support for A3GFC1 as seed ortholog is 100%.

Group of orthologs #222. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 S.stipitis:413

A8JBG4              	100.00%		A3GHA5              	100.00%
Bootstrap support for A8JBG4 as seed ortholog is 100%.
Bootstrap support for A3GHA5 as seed ortholog is 100%.

Group of orthologs #223. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 S.stipitis:413

A8JBC7              	100.00%		A3LYM2              	100.00%
Bootstrap support for A8JBC7 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #224. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:181

A8HQF5              	100.00%		A3LQA3              	100.00%
Bootstrap support for A8HQF5 as seed ortholog is 99%.
Bootstrap support for A3LQA3 as seed ortholog is 99%.

Group of orthologs #225. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 S.stipitis:411

A8JDP3              	100.00%		A3LTJ7              	100.00%
Bootstrap support for A8JDP3 as seed ortholog is 100%.
Bootstrap support for A3LTJ7 as seed ortholog is 100%.

Group of orthologs #226. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:132

A8IV98              	100.00%		A3LRW2              	100.00%
Bootstrap support for A8IV98 as seed ortholog is 99%.
Bootstrap support for A3LRW2 as seed ortholog is 99%.

Group of orthologs #227. Best score 409 bits
Score difference with first non-orthologous sequence - C.reinhardtii:357 S.stipitis:409

A8IWF2              	100.00%		A3GHA0              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 100%.
Bootstrap support for A3GHA0 as seed ortholog is 100%.

Group of orthologs #228. Best score 407 bits
Score difference with first non-orthologous sequence - C.reinhardtii:407 S.stipitis:407

A8IE23              	100.00%		A3LXX9              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for A3LXX9 as seed ortholog is 100%.

Group of orthologs #229. Best score 407 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 S.stipitis:173

Q6IV67              	100.00%		A3LUB6              	100.00%
Bootstrap support for Q6IV67 as seed ortholog is 100%.
Bootstrap support for A3LUB6 as seed ortholog is 100%.

Group of orthologs #230. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:406 S.stipitis:406

A8IUL6              	100.00%		A3GI67              	100.00%
Bootstrap support for A8IUL6 as seed ortholog is 100%.
Bootstrap support for A3GI67 as seed ortholog is 100%.

Group of orthologs #231. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:406 S.stipitis:406

A8J0I0              	100.00%		A3GGS9              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for A3GGS9 as seed ortholog is 100%.

Group of orthologs #232. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 S.stipitis:405

A8I305              	100.00%		A3M037              	100.00%
Bootstrap support for A8I305 as seed ortholog is 92%.
Bootstrap support for A3M037 as seed ortholog is 100%.

Group of orthologs #233. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 S.stipitis:404

A8IET6              	100.00%		A3GHT7              	100.00%
Bootstrap support for A8IET6 as seed ortholog is 75%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #234. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:404 S.stipitis:404

A8IDM1              	100.00%		A3LUX2              	100.00%
Bootstrap support for A8IDM1 as seed ortholog is 100%.
Bootstrap support for A3LUX2 as seed ortholog is 100%.

Group of orthologs #235. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 S.stipitis:396

A8HPR5              	100.00%		A3LUH7              	100.00%
A8J484              	40.05%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for A3LUH7 as seed ortholog is 100%.

Group of orthologs #236. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 S.stipitis:396

A8HS79              	100.00%		A3LXN7              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 100%.
Bootstrap support for A3LXN7 as seed ortholog is 100%.

Group of orthologs #237. Best score 395 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:140

A8ISF0              	100.00%		A3LYA7              	100.00%
Bootstrap support for A8ISF0 as seed ortholog is 99%.
Bootstrap support for A3LYA7 as seed ortholog is 99%.

Group of orthologs #238. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 S.stipitis:394

A8J1Z0              	100.00%		A3GEY7              	100.00%
Bootstrap support for A8J1Z0 as seed ortholog is 99%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #239. Best score 391 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 S.stipitis:391

A8IRV6              	100.00%		A3LY29              	100.00%
Bootstrap support for A8IRV6 as seed ortholog is 100%.
Bootstrap support for A3LY29 as seed ortholog is 100%.

Group of orthologs #240. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:389 S.stipitis:389

A8I9R1              	100.00%		A3LW23              	100.00%
Bootstrap support for A8I9R1 as seed ortholog is 100%.
Bootstrap support for A3LW23 as seed ortholog is 100%.

Group of orthologs #241. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 S.stipitis:388

A8J5R5              	100.00%		A3LTF8              	100.00%
Bootstrap support for A8J5R5 as seed ortholog is 100%.
Bootstrap support for A3LTF8 as seed ortholog is 100%.

Group of orthologs #242. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 S.stipitis:388

A8JCG5              	100.00%		A3GID9              	100.00%
Bootstrap support for A8JCG5 as seed ortholog is 100%.
Bootstrap support for A3GID9 as seed ortholog is 100%.

Group of orthologs #243. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 S.stipitis:388

A8J2Z6              	100.00%		A3LYZ8              	100.00%
Bootstrap support for A8J2Z6 as seed ortholog is 100%.
Bootstrap support for A3LYZ8 as seed ortholog is 100%.

Group of orthologs #244. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 S.stipitis:282

A8J8V7              	100.00%		A3GFR9              	100.00%
Bootstrap support for A8J8V7 as seed ortholog is 100%.
Bootstrap support for A3GFR9 as seed ortholog is 100%.

Group of orthologs #245. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 S.stipitis:386

A8HRF8              	100.00%		A3GI11              	100.00%
Bootstrap support for A8HRF8 as seed ortholog is 100%.
Bootstrap support for A3GI11 as seed ortholog is 100%.

Group of orthologs #246. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 S.stipitis:386

A8HPA0              	100.00%		A3LWP3              	100.00%
Bootstrap support for A8HPA0 as seed ortholog is 100%.
Bootstrap support for A3LWP3 as seed ortholog is 100%.

Group of orthologs #247. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 S.stipitis:386

A8IWJ8              	100.00%		A3GFF3              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #248. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 S.stipitis:386

A8ITS8              	100.00%		A3LYY4              	100.00%
Bootstrap support for A8ITS8 as seed ortholog is 100%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #249. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 S.stipitis:386

A8J9E6              	100.00%		A3LTA9              	100.00%
Bootstrap support for A8J9E6 as seed ortholog is 100%.
Bootstrap support for A3LTA9 as seed ortholog is 100%.

Group of orthologs #250. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 S.stipitis:385

A8HQU3              	100.00%		A3LR72              	100.00%
Bootstrap support for A8HQU3 as seed ortholog is 100%.
Bootstrap support for A3LR72 as seed ortholog is 100%.

Group of orthologs #251. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 S.stipitis:71

A8I1P3              	100.00%		A3LXZ6              	100.00%
Bootstrap support for A8I1P3 as seed ortholog is 97%.
Bootstrap support for A3LXZ6 as seed ortholog is 98%.

Group of orthologs #252. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 S.stipitis:153

A8HQS1              	100.00%		A3LYG4              	100.00%
Bootstrap support for A8HQS1 as seed ortholog is 100%.
Bootstrap support for A3LYG4 as seed ortholog is 99%.

Group of orthologs #253. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 S.stipitis:384

A8IZ85              	100.00%		A3LPQ6              	100.00%
Bootstrap support for A8IZ85 as seed ortholog is 100%.
Bootstrap support for A3LPQ6 as seed ortholog is 100%.

Group of orthologs #254. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 S.stipitis:259

A8ITF6              	100.00%		A3LWQ1              	100.00%
Bootstrap support for A8ITF6 as seed ortholog is 100%.
Bootstrap support for A3LWQ1 as seed ortholog is 100%.

Group of orthologs #255. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 S.stipitis:195

A8J3M6              	100.00%		A3LYF0              	100.00%
Bootstrap support for A8J3M6 as seed ortholog is 99%.
Bootstrap support for A3LYF0 as seed ortholog is 99%.

Group of orthologs #256. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 S.stipitis:211

A8JHA8              	100.00%		A3LZT3              	100.00%
Bootstrap support for A8JHA8 as seed ortholog is 100%.
Bootstrap support for A3LZT3 as seed ortholog is 99%.

Group of orthologs #257. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 S.stipitis:381

A8JHM2              	100.00%		A3GGB4              	100.00%
Bootstrap support for A8JHM2 as seed ortholog is 100%.
Bootstrap support for A3GGB4 as seed ortholog is 100%.

Group of orthologs #258. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 S.stipitis:110

A8I495              	100.00%		A3GG17              	100.00%
A8I882              	7.89%		
Bootstrap support for A8I495 as seed ortholog is 99%.
Bootstrap support for A3GG17 as seed ortholog is 99%.

Group of orthologs #259. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 S.stipitis:379

A8IA89              	100.00%		A3LSS5              	100.00%
Bootstrap support for A8IA89 as seed ortholog is 100%.
Bootstrap support for A3LSS5 as seed ortholog is 100%.

Group of orthologs #260. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:378 S.stipitis:378

A8J709              	100.00%		A3LQ74              	100.00%
Bootstrap support for A8J709 as seed ortholog is 100%.
Bootstrap support for A3LQ74 as seed ortholog is 100%.

Group of orthologs #261. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 S.stipitis:377

A8JFT1              	100.00%		A3LPZ7              	100.00%
Bootstrap support for A8JFT1 as seed ortholog is 100%.
Bootstrap support for A3LPZ7 as seed ortholog is 100%.

Group of orthologs #262. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:375 S.stipitis:129

A8IGM2              	100.00%		A3LQF5              	100.00%
Bootstrap support for A8IGM2 as seed ortholog is 100%.
Bootstrap support for A3LQF5 as seed ortholog is 99%.

Group of orthologs #263. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 S.stipitis:224

A8JHL1              	100.00%		A3LTW6              	100.00%
Bootstrap support for A8JHL1 as seed ortholog is 99%.
Bootstrap support for A3LTW6 as seed ortholog is 99%.

Group of orthologs #264. Best score 373 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:373

A8JC04              	100.00%		A3LUY2              	100.00%
Bootstrap support for A8JC04 as seed ortholog is 99%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #265. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:372 S.stipitis:372

A8IMP6              	100.00%		A3GFG0              	100.00%
                    	       		A3LZ47              	97.40%
Bootstrap support for A8IMP6 as seed ortholog is 100%.
Bootstrap support for A3GFG0 as seed ortholog is 100%.

Group of orthologs #266. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:372 S.stipitis:372

A8IKA1              	100.00%		A3LNJ9              	100.00%
Bootstrap support for A8IKA1 as seed ortholog is 100%.
Bootstrap support for A3LNJ9 as seed ortholog is 100%.

Group of orthologs #267. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 S.stipitis:169

A8J6M4              	100.00%		A3LQ34              	100.00%
A8J6M5              	81.83%		
Bootstrap support for A8J6M4 as seed ortholog is 99%.
Bootstrap support for A3LQ34 as seed ortholog is 97%.

Group of orthologs #268. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 S.stipitis:371

A8J2Z9              	100.00%		A3M056              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 100%.
Bootstrap support for A3M056 as seed ortholog is 100%.

Group of orthologs #269. Best score 369 bits
Score difference with first non-orthologous sequence - C.reinhardtii:369 S.stipitis:224

A8IWM1              	100.00%		A3LRX2              	100.00%
Bootstrap support for A8IWM1 as seed ortholog is 100%.
Bootstrap support for A3LRX2 as seed ortholog is 99%.

Group of orthologs #270. Best score 369 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 S.stipitis:369

A8IVR6              	100.00%		A3LUJ3              	100.00%
Bootstrap support for A8IVR6 as seed ortholog is 99%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #271. Best score 368 bits
Score difference with first non-orthologous sequence - C.reinhardtii:368 S.stipitis:368

A8HUE0              	100.00%		A3LYX3              	100.00%
Bootstrap support for A8HUE0 as seed ortholog is 100%.
Bootstrap support for A3LYX3 as seed ortholog is 100%.

Group of orthologs #272. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 S.stipitis:367

A8IVK1              	100.00%		A3GFN6              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 100%.
Bootstrap support for A3GFN6 as seed ortholog is 100%.

Group of orthologs #273. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 S.stipitis:367

A8JF71              	100.00%		A3GGB3              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #274. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 S.stipitis:366

A8IQ05              	100.00%		A3LP98              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #275. Best score 365 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 S.stipitis:365

A8I2V9              	100.00%		A3GGJ5              	100.00%
Bootstrap support for A8I2V9 as seed ortholog is 78%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #276. Best score 365 bits
Score difference with first non-orthologous sequence - C.reinhardtii:365 S.stipitis:365

A8HM54              	100.00%		A3LSY2              	100.00%
Bootstrap support for A8HM54 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #277. Best score 365 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:365

A8JFV6              	100.00%		A3LVL9              	100.00%
Bootstrap support for A8JFV6 as seed ortholog is 90%.
Bootstrap support for A3LVL9 as seed ortholog is 100%.

Group of orthologs #278. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 S.stipitis:364

A8II65              	100.00%		A3GF19              	100.00%
A8IB03              	73.46%		
A8IB05              	73.46%		
A8II76              	69.17%		
Bootstrap support for A8II65 as seed ortholog is 100%.
Bootstrap support for A3GF19 as seed ortholog is 100%.

Group of orthologs #279. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 S.stipitis:92

A8JD38              	100.00%		A3LNA9              	100.00%
A8J7Z3              	7.80%		
Bootstrap support for A8JD38 as seed ortholog is 100%.
Bootstrap support for A3LNA9 as seed ortholog is 93%.

Group of orthologs #280. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:101

A8IZ49              	100.00%		A3LRD1              	100.00%
                    	       		A3LPT8              	21.89%
Bootstrap support for A8IZ49 as seed ortholog is 99%.
Bootstrap support for A3LRD1 as seed ortholog is 99%.

Group of orthologs #281. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 S.stipitis:84

A8IWA5              	100.00%		A3LNL1              	100.00%
Bootstrap support for A8IWA5 as seed ortholog is 99%.
Bootstrap support for A3LNL1 as seed ortholog is 98%.

Group of orthologs #282. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 S.stipitis:151

A8IRS6              	100.00%		A3LW89              	100.00%
Bootstrap support for A8IRS6 as seed ortholog is 96%.
Bootstrap support for A3LW89 as seed ortholog is 99%.

Group of orthologs #283. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 S.stipitis:152

A8J0X4              	100.00%		A3LUB4              	100.00%
                    	       		A3LPT7              	30.68%
Bootstrap support for A8J0X4 as seed ortholog is 100%.
Bootstrap support for A3LUB4 as seed ortholog is 99%.

Group of orthologs #284. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:359

A8JGV6              	100.00%		A3LXG8              	100.00%
Bootstrap support for A8JGV6 as seed ortholog is 99%.
Bootstrap support for A3LXG8 as seed ortholog is 100%.

Group of orthologs #285. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 S.stipitis:359

Q9S7V1              	100.00%		A3LZU4              	100.00%
Bootstrap support for Q9S7V1 as seed ortholog is 99%.
Bootstrap support for A3LZU4 as seed ortholog is 100%.

Group of orthologs #286. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 S.stipitis:358

A8J1V5              	100.00%		A3LSC7              	100.00%
A8HYH4              	12.31%		
Bootstrap support for A8J1V5 as seed ortholog is 99%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #287. Best score 357 bits
Score difference with first non-orthologous sequence - C.reinhardtii:357 S.stipitis:357

A8JD96              	100.00%		A3GG41              	100.00%
Bootstrap support for A8JD96 as seed ortholog is 100%.
Bootstrap support for A3GG41 as seed ortholog is 100%.

Group of orthologs #288. Best score 356 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 S.stipitis:356

A8HZZ4              	100.00%		A3LPT6              	100.00%
Bootstrap support for A8HZZ4 as seed ortholog is 99%.
Bootstrap support for A3LPT6 as seed ortholog is 100%.

Group of orthologs #289. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:355 S.stipitis:355

A8HZ26              	100.00%		A3LUE4              	100.00%
Bootstrap support for A8HZ26 as seed ortholog is 100%.
Bootstrap support for A3LUE4 as seed ortholog is 100%.

Group of orthologs #290. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 S.stipitis:276

A8J8Y1              	100.00%		A3LWH7              	100.00%
Bootstrap support for A8J8Y1 as seed ortholog is 100%.
Bootstrap support for A3LWH7 as seed ortholog is 100%.

Group of orthologs #291. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:167

A8HX38              	100.00%		A3LQC6              	100.00%
Bootstrap support for A8HX38 as seed ortholog is 99%.
Bootstrap support for A3LQC6 as seed ortholog is 99%.

Group of orthologs #292. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 S.stipitis:354

A8IBR0              	100.00%		A3LTH8              	100.00%
Bootstrap support for A8IBR0 as seed ortholog is 100%.
Bootstrap support for A3LTH8 as seed ortholog is 100%.

Group of orthologs #293. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 S.stipitis:354

A8J1U3              	100.00%		A3LUG6              	100.00%
Bootstrap support for A8J1U3 as seed ortholog is 100%.
Bootstrap support for A3LUG6 as seed ortholog is 100%.

Group of orthologs #294. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 S.stipitis:288

A8J4I7              	100.00%		A3LT38              	100.00%
Bootstrap support for A8J4I7 as seed ortholog is 100%.
Bootstrap support for A3LT38 as seed ortholog is 100%.

Group of orthologs #295. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 S.stipitis:352

A8J9T2              	100.00%		A3GHL1              	100.00%
Bootstrap support for A8J9T2 as seed ortholog is 100%.
Bootstrap support for A3GHL1 as seed ortholog is 100%.

Group of orthologs #296. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 S.stipitis:352

A8JBB8              	100.00%		A3LTA3              	100.00%
Bootstrap support for A8JBB8 as seed ortholog is 100%.
Bootstrap support for A3LTA3 as seed ortholog is 100%.

Group of orthologs #297. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 S.stipitis:293

A8JDD2              	100.00%		A3LXZ1              	100.00%
Bootstrap support for A8JDD2 as seed ortholog is 100%.
Bootstrap support for A3LXZ1 as seed ortholog is 100%.

Group of orthologs #298. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 S.stipitis:351

A8JCY9              	100.00%		A3M0A1              	100.00%
Bootstrap support for A8JCY9 as seed ortholog is 100%.
Bootstrap support for A3M0A1 as seed ortholog is 100%.

Group of orthologs #299. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 S.stipitis:347

A8JBI5              	100.00%		A3LW26              	100.00%
Bootstrap support for A8JBI5 as seed ortholog is 100%.
Bootstrap support for A3LW26 as seed ortholog is 100%.

Group of orthologs #300. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 S.stipitis:347

A8J9T5              	100.00%		A3LZT6              	100.00%
Bootstrap support for A8J9T5 as seed ortholog is 100%.
Bootstrap support for A3LZT6 as seed ortholog is 100%.

Group of orthologs #301. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:9

Q9FXT7              	100.00%		A3GF15              	100.00%
A8IKD6              	27.31%		A3LY05              	14.83%
A8IKE3              	23.93%		
Bootstrap support for Q9FXT7 as seed ortholog is 98%.
Bootstrap support for A3GF15 as seed ortholog is 57%.
Alternative seed ortholog is A3LN91 (9 bits away from this cluster)

Group of orthologs #302. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 S.stipitis:346

A8HUI3              	100.00%		A3LQI7              	100.00%
                    	       		A3LRX6              	35.46%
Bootstrap support for A8HUI3 as seed ortholog is 100%.
Bootstrap support for A3LQI7 as seed ortholog is 100%.

Group of orthologs #303. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:344 S.stipitis:344

A8J506              	100.00%		A3GH36              	100.00%
Bootstrap support for A8J506 as seed ortholog is 100%.
Bootstrap support for A3GH36 as seed ortholog is 100%.

Group of orthologs #304. Best score 343 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:7

A8J0R7              	100.00%		A3LNB3              	100.00%
Bootstrap support for A8J0R7 as seed ortholog is 96%.
Bootstrap support for A3LNB3 as seed ortholog is 57%.
Alternative seed ortholog is A3LYS8 (7 bits away from this cluster)

Group of orthologs #305. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 S.stipitis:342

A8HYQ1              	100.00%		A3GGB7              	100.00%
Bootstrap support for A8HYQ1 as seed ortholog is 100%.
Bootstrap support for A3GGB7 as seed ortholog is 100%.

Group of orthologs #306. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 S.stipitis:119

A8JDN9              	100.00%		A3GF66              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 100%.
Bootstrap support for A3GF66 as seed ortholog is 99%.

Group of orthologs #307. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 S.stipitis:342

A8JBB2              	100.00%		A3LU56              	100.00%
Bootstrap support for A8JBB2 as seed ortholog is 100%.
Bootstrap support for A3LU56 as seed ortholog is 100%.

Group of orthologs #308. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 S.stipitis:342

Q6DN05              	100.00%		A3LWZ4              	100.00%
Bootstrap support for Q6DN05 as seed ortholog is 100%.
Bootstrap support for A3LWZ4 as seed ortholog is 100%.

Group of orthologs #309. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:341

A8I2E4              	100.00%		A3LR95              	100.00%
Bootstrap support for A8I2E4 as seed ortholog is 99%.
Bootstrap support for A3LR95 as seed ortholog is 100%.

Group of orthologs #310. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 S.stipitis:339

A8IZ78              	100.00%		A3GI60              	100.00%
Bootstrap support for A8IZ78 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 100%.

Group of orthologs #311. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 S.stipitis:339

A8J1S8              	100.00%		A3LWV7              	100.00%
Bootstrap support for A8J1S8 as seed ortholog is 100%.
Bootstrap support for A3LWV7 as seed ortholog is 100%.

Group of orthologs #312. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:338 S.stipitis:338

A8J537              	100.00%		A3LNL4              	100.00%
Bootstrap support for A8J537 as seed ortholog is 100%.
Bootstrap support for A3LNL4 as seed ortholog is 100%.

Group of orthologs #313. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 S.stipitis:337

A8I274              	100.00%		A3LTN8              	100.00%
Bootstrap support for A8I274 as seed ortholog is 100%.
Bootstrap support for A3LTN8 as seed ortholog is 100%.

Group of orthologs #314. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 S.stipitis:337

A8HXM5              	100.00%		A3LW59              	100.00%
Bootstrap support for A8HXM5 as seed ortholog is 100%.
Bootstrap support for A3LW59 as seed ortholog is 100%.

Group of orthologs #315. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:31

A8I263              	100.00%		A3LZ01              	100.00%
A8J129              	19.85%		
Bootstrap support for A8I263 as seed ortholog is 94%.
Bootstrap support for A3LZ01 as seed ortholog is 78%.

Group of orthologs #316. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 S.stipitis:336

A8IWV0              	100.00%		A3LQ91              	100.00%
Bootstrap support for A8IWV0 as seed ortholog is 100%.
Bootstrap support for A3LQ91 as seed ortholog is 100%.

Group of orthologs #317. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 S.stipitis:254

A8JGU0              	100.00%		A3LQK0              	100.00%
Bootstrap support for A8JGU0 as seed ortholog is 99%.
Bootstrap support for A3LQK0 as seed ortholog is 100%.

Group of orthologs #318. Best score 335 bits
Score difference with first non-orthologous sequence - C.reinhardtii:335 S.stipitis:335

A8J5Y9              	100.00%		A3GGQ5              	100.00%
Bootstrap support for A8J5Y9 as seed ortholog is 100%.
Bootstrap support for A3GGQ5 as seed ortholog is 100%.

Group of orthologs #319. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 S.stipitis:334

A8ILT1              	100.00%		A3LUU1              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 100%.
Bootstrap support for A3LUU1 as seed ortholog is 100%.

Group of orthologs #320. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 S.stipitis:239

A8IRX5              	100.00%		A3LW11              	100.00%
Bootstrap support for A8IRX5 as seed ortholog is 100%.
Bootstrap support for A3LW11 as seed ortholog is 100%.

Group of orthologs #321. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:169

A8J5P7              	100.00%		A3LXK3              	100.00%
Bootstrap support for A8J5P7 as seed ortholog is 100%.
Bootstrap support for A3LXK3 as seed ortholog is 99%.

Group of orthologs #322. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:332

A8IEF3              	100.00%		A3GGS1              	100.00%
Bootstrap support for A8IEF3 as seed ortholog is 99%.
Bootstrap support for A3GGS1 as seed ortholog is 100%.

Group of orthologs #323. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 S.stipitis:332

A8J5T5              	100.00%		A3GFK8              	100.00%
Bootstrap support for A8J5T5 as seed ortholog is 100%.
Bootstrap support for A3GFK8 as seed ortholog is 100%.

Group of orthologs #324. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 S.stipitis:256

A8JD37              	100.00%		A3LYL8              	100.00%
Bootstrap support for A8JD37 as seed ortholog is 99%.
Bootstrap support for A3LYL8 as seed ortholog is 100%.

Group of orthologs #325. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 S.stipitis:19

A8J6J6              	100.00%		A3LZQ3              	100.00%
Bootstrap support for A8J6J6 as seed ortholog is 100%.
Bootstrap support for A3LZQ3 as seed ortholog is 70%.
Alternative seed ortholog is A3LMS9 (19 bits away from this cluster)

Group of orthologs #326. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:330

A8HWC2              	100.00%		A3LV50              	100.00%
A8HYN3              	6.79%		
Bootstrap support for A8HWC2 as seed ortholog is 98%.
Bootstrap support for A3LV50 as seed ortholog is 100%.

Group of orthologs #327. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:330 S.stipitis:330

A8JDC2              	100.00%		A3LQK9              	100.00%
A8JHM1              	100.00%		
Bootstrap support for A8JDC2 as seed ortholog is 100%.
Bootstrap support for A8JHM1 as seed ortholog is 100%.
Bootstrap support for A3LQK9 as seed ortholog is 100%.

Group of orthologs #328. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 S.stipitis:92

A8JAE8              	100.00%		A3LZ36              	100.00%
A8J9E5              	30.45%		
Bootstrap support for A8JAE8 as seed ortholog is 100%.
Bootstrap support for A3LZ36 as seed ortholog is 97%.

Group of orthologs #329. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 S.stipitis:129

A8IHM8              	100.00%		A3LNZ4              	100.00%
Bootstrap support for A8IHM8 as seed ortholog is 100%.
Bootstrap support for A3LNZ4 as seed ortholog is 99%.

Group of orthologs #330. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 S.stipitis:329

A8J825              	100.00%		A3LVS2              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #331. Best score 328 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:184

A8J8H3              	100.00%		A3LU60              	100.00%
Bootstrap support for A8J8H3 as seed ortholog is 92%.
Bootstrap support for A3LU60 as seed ortholog is 99%.

Group of orthologs #332. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 S.stipitis:54

A8JHU0              	100.00%		A3GGD9              	100.00%
P93106              	9.09%		
Bootstrap support for A8JHU0 as seed ortholog is 100%.
Bootstrap support for A3GGD9 as seed ortholog is 93%.

Group of orthologs #333. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 S.stipitis:327

A8HX04              	100.00%		A3M027              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #334. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 S.stipitis:327

A8IT31              	100.00%		A3M042              	100.00%
Bootstrap support for A8IT31 as seed ortholog is 100%.
Bootstrap support for A3M042 as seed ortholog is 100%.

Group of orthologs #335. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 S.stipitis:326

A8HMQ7              	100.00%		A3GI57              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #336. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 S.stipitis:326

A8J4X2              	100.00%		A3GH90              	100.00%
Bootstrap support for A8J4X2 as seed ortholog is 100%.
Bootstrap support for A3GH90 as seed ortholog is 100%.

Group of orthologs #337. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 S.stipitis:86

Q84X74              	100.00%		A3LU37              	100.00%
Bootstrap support for Q84X74 as seed ortholog is 100%.
Bootstrap support for A3LU37 as seed ortholog is 99%.

Group of orthologs #338. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:112

A8IL29              	100.00%		A3LYV6              	100.00%
                    	       		A3LZR8              	80.00%
Bootstrap support for A8IL29 as seed ortholog is 99%.
Bootstrap support for A3LYV6 as seed ortholog is 100%.

Group of orthologs #339. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 S.stipitis:226

A8IBJ5              	100.00%		A3GFH8              	100.00%
Bootstrap support for A8IBJ5 as seed ortholog is 100%.
Bootstrap support for A3GFH8 as seed ortholog is 100%.

Group of orthologs #340. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 S.stipitis:324

A8IDY0              	100.00%		A3LSU9              	100.00%
Bootstrap support for A8IDY0 as seed ortholog is 100%.
Bootstrap support for A3LSU9 as seed ortholog is 100%.

Group of orthologs #341. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 S.stipitis:60

A8JB47              	100.00%		A3LMX1              	100.00%
Bootstrap support for A8JB47 as seed ortholog is 99%.
Bootstrap support for A3LMX1 as seed ortholog is 93%.

Group of orthologs #342. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:323 S.stipitis:323

A8IK52              	100.00%		A3LQ06              	100.00%
Bootstrap support for A8IK52 as seed ortholog is 100%.
Bootstrap support for A3LQ06 as seed ortholog is 100%.

Group of orthologs #343. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 S.stipitis:61

A8J1F4              	100.00%		A3LMW8              	100.00%
Bootstrap support for A8J1F4 as seed ortholog is 63%.
Alternative seed ortholog is A8J7S6 (10 bits away from this cluster)
Bootstrap support for A3LMW8 as seed ortholog is 92%.

Group of orthologs #344. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:323 S.stipitis:323

A8J5W8              	100.00%		A3LT44              	100.00%
Bootstrap support for A8J5W8 as seed ortholog is 100%.
Bootstrap support for A3LT44 as seed ortholog is 100%.

Group of orthologs #345. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 S.stipitis:322

A8J2W0              	100.00%		A3LZI8              	100.00%
Bootstrap support for A8J2W0 as seed ortholog is 100%.
Bootstrap support for A3LZI8 as seed ortholog is 100%.

Group of orthologs #346. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 S.stipitis:222

A8J933              	100.00%		A3GF49              	100.00%
Bootstrap support for A8J933 as seed ortholog is 99%.
Bootstrap support for A3GF49 as seed ortholog is 100%.

Group of orthologs #347. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:321 S.stipitis:12

A8JG41              	100.00%		A3LRY3              	100.00%
Bootstrap support for A8JG41 as seed ortholog is 100%.
Bootstrap support for A3LRY3 as seed ortholog is 63%.
Alternative seed ortholog is A3M0J7 (12 bits away from this cluster)

Group of orthologs #348. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 S.stipitis:320

A8IX41              	100.00%		A3LU92              	100.00%
Bootstrap support for A8IX41 as seed ortholog is 100%.
Bootstrap support for A3LU92 as seed ortholog is 100%.

Group of orthologs #349. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 S.stipitis:192

A8J5F6              	100.00%		A3LV40              	100.00%
Bootstrap support for A8J5F6 as seed ortholog is 99%.
Bootstrap support for A3LV40 as seed ortholog is 99%.

Group of orthologs #350. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:319

A8IG50              	100.00%		A3LZS7              	100.00%
Bootstrap support for A8IG50 as seed ortholog is 87%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #351. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 S.stipitis:317

A8J6M3              	100.00%		A3GHH1              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 100%.
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #352. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:101

A8IS61              	100.00%		A3LP87              	100.00%
Bootstrap support for A8IS61 as seed ortholog is 99%.
Bootstrap support for A3LP87 as seed ortholog is 99%.

Group of orthologs #353. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 S.stipitis:315

A8IFG0              	100.00%		A3LPA1              	100.00%
Bootstrap support for A8IFG0 as seed ortholog is 100%.
Bootstrap support for A3LPA1 as seed ortholog is 100%.

Group of orthologs #354. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 S.stipitis:314

A8HS48              	100.00%		A3LX67              	100.00%
                    	       		A3LUW5              	85.71%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for A3LX67 as seed ortholog is 100%.

Group of orthologs #355. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 S.stipitis:314

A8HP55              	100.00%		A3LPI4              	100.00%
Bootstrap support for A8HP55 as seed ortholog is 100%.
Bootstrap support for A3LPI4 as seed ortholog is 100%.

Group of orthologs #356. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:314

A8HME7              	100.00%		A3LTK0              	100.00%
Bootstrap support for A8HME7 as seed ortholog is 90%.
Bootstrap support for A3LTK0 as seed ortholog is 100%.

Group of orthologs #357. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 S.stipitis:237

A8HZA9              	100.00%		A3LNI4              	100.00%
Bootstrap support for A8HZA9 as seed ortholog is 100%.
Bootstrap support for A3LNI4 as seed ortholog is 100%.

Group of orthologs #358. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 S.stipitis:314

A8HWK6              	100.00%		A3LWI9              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 100%.
Bootstrap support for A3LWI9 as seed ortholog is 100%.

Group of orthologs #359. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 S.stipitis:313

A8IYU6              	100.00%		A3LSA9              	100.00%
A8IYU5              	39.78%		
Bootstrap support for A8IYU6 as seed ortholog is 100%.
Bootstrap support for A3LSA9 as seed ortholog is 100%.

Group of orthologs #360. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 S.stipitis:313

A8J629              	100.00%		A3LQE5              	100.00%
A8J4L6              	27.29%		
Bootstrap support for A8J629 as seed ortholog is 100%.
Bootstrap support for A3LQE5 as seed ortholog is 100%.

Group of orthologs #361. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 S.stipitis:313

A8JGD2              	100.00%		A3GHE2              	100.00%
Bootstrap support for A8JGD2 as seed ortholog is 79%.
Bootstrap support for A3GHE2 as seed ortholog is 100%.

Group of orthologs #362. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 S.stipitis:312

A8JF52              	100.00%		A3GFK3              	100.00%
A8IQ59              	16.65%		
A8JF90              	15.20%		
A8JF89              	12.01%		
A8J6D9              	10.91%		
Bootstrap support for A8JF52 as seed ortholog is 100%.
Bootstrap support for A3GFK3 as seed ortholog is 100%.

Group of orthologs #363. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 S.stipitis:147

A8IA67              	100.00%		A3LU51              	100.00%
Bootstrap support for A8IA67 as seed ortholog is 100%.
Bootstrap support for A3LU51 as seed ortholog is 99%.

Group of orthologs #364. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:102

A8IQC5              	100.00%		A3M086              	100.00%
Bootstrap support for A8IQC5 as seed ortholog is 99%.
Bootstrap support for A3M086 as seed ortholog is 98%.

Group of orthologs #365. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 S.stipitis:193

A8J9W4              	100.00%		A3LZ69              	100.00%
Bootstrap support for A8J9W4 as seed ortholog is 99%.
Bootstrap support for A3LZ69 as seed ortholog is 99%.

Group of orthologs #366. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 S.stipitis:200

A8I7H0              	100.00%		A3GH14              	100.00%
A8JHY5              	14.40%		
Bootstrap support for A8I7H0 as seed ortholog is 100%.
Bootstrap support for A3GH14 as seed ortholog is 99%.

Group of orthologs #367. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 S.stipitis:310

A8J3M3              	100.00%		A3LYA4              	100.00%
Bootstrap support for A8J3M3 as seed ortholog is 100%.
Bootstrap support for A3LYA4 as seed ortholog is 100%.

Group of orthologs #368. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 S.stipitis:308

A8J9S9              	100.00%		A3LR63              	100.00%
Bootstrap support for A8J9S9 as seed ortholog is 100%.
Bootstrap support for A3LR63 as seed ortholog is 100%.

Group of orthologs #369. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 S.stipitis:120

A8JH82              	100.00%		A3LSJ3              	100.00%
Bootstrap support for A8JH82 as seed ortholog is 100%.
Bootstrap support for A3LSJ3 as seed ortholog is 99%.

Group of orthologs #370. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 S.stipitis:307

A8J5W3              	100.00%		A3GEZ0              	100.00%
Bootstrap support for A8J5W3 as seed ortholog is 99%.
Bootstrap support for A3GEZ0 as seed ortholog is 100%.

Group of orthologs #371. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 S.stipitis:307

A8J7D8              	100.00%		A3LY74              	100.00%
Bootstrap support for A8J7D8 as seed ortholog is 100%.
Bootstrap support for A3LY74 as seed ortholog is 100%.

Group of orthologs #372. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 S.stipitis:180

A8IMW9              	100.00%		A3GH91              	100.00%
Bootstrap support for A8IMW9 as seed ortholog is 99%.
Bootstrap support for A3GH91 as seed ortholog is 99%.

Group of orthologs #373. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 S.stipitis:306

A8HQP0              	100.00%		A3M0D0              	100.00%
Bootstrap support for A8HQP0 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #374. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 S.stipitis:305

A8JDQ4              	100.00%		A3M0D4              	100.00%
Bootstrap support for A8JDQ4 as seed ortholog is 98%.
Bootstrap support for A3M0D4 as seed ortholog is 100%.

Group of orthologs #375. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 S.stipitis:304

A8J7N7              	100.00%		A3LWT7              	100.00%
Bootstrap support for A8J7N7 as seed ortholog is 100%.
Bootstrap support for A3LWT7 as seed ortholog is 100%.

Group of orthologs #376. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:303 S.stipitis:303

A8HTR3              	100.00%		A3GH62              	100.00%
Bootstrap support for A8HTR3 as seed ortholog is 100%.
Bootstrap support for A3GH62 as seed ortholog is 100%.

Group of orthologs #377. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 S.stipitis:302

A8JB14              	100.00%		A3LRV4              	100.00%
                    	       		A3LSN7              	6.29%
                    	       		A3GIE7              	5.26%
Bootstrap support for A8JB14 as seed ortholog is 100%.
Bootstrap support for A3LRV4 as seed ortholog is 100%.

Group of orthologs #378. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:161

A8I520              	100.00%		A3LY99              	100.00%
A8J1W3              	20.72%		
Bootstrap support for A8I520 as seed ortholog is 99%.
Bootstrap support for A3LY99 as seed ortholog is 99%.

Group of orthologs #379. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 S.stipitis:301

A8IH03              	100.00%		A3LW21              	100.00%
Bootstrap support for A8IH03 as seed ortholog is 100%.
Bootstrap support for A3LW21 as seed ortholog is 100%.

Group of orthologs #380. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 S.stipitis:301

A8J244              	100.00%		A3LXB5              	100.00%
Bootstrap support for A8J244 as seed ortholog is 100%.
Bootstrap support for A3LXB5 as seed ortholog is 100%.

Group of orthologs #381. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 S.stipitis:300

A8I8V6              	100.00%		A3LRZ6              	100.00%
Bootstrap support for A8I8V6 as seed ortholog is 100%.
Bootstrap support for A3LRZ6 as seed ortholog is 100%.

Group of orthologs #382. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 S.stipitis:300

A8JBE4              	100.00%		A3LSG9              	100.00%
Bootstrap support for A8JBE4 as seed ortholog is 100%.
Bootstrap support for A3LSG9 as seed ortholog is 100%.

Group of orthologs #383. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 S.stipitis:217

A8JI52              	100.00%		A3LTY5              	100.00%
Bootstrap support for A8JI52 as seed ortholog is 100%.
Bootstrap support for A3LTY5 as seed ortholog is 100%.

Group of orthologs #384. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 S.stipitis:299

A8IDH5              	100.00%		A3M075              	100.00%
Bootstrap support for A8IDH5 as seed ortholog is 100%.
Bootstrap support for A3M075 as seed ortholog is 100%.

Group of orthologs #385. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 S.stipitis:299

A8J5E0              	100.00%		A3LVH9              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 100%.
Bootstrap support for A3LVH9 as seed ortholog is 100%.

Group of orthologs #386. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 S.stipitis:60

A8JFA4              	100.00%		A3LRL7              	100.00%
Bootstrap support for A8JFA4 as seed ortholog is 100%.
Bootstrap support for A3LRL7 as seed ortholog is 95%.

Group of orthologs #387. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:180

A8IZ65              	100.00%		A3GI29              	100.00%
Bootstrap support for A8IZ65 as seed ortholog is 99%.
Bootstrap support for A3GI29 as seed ortholog is 99%.

Group of orthologs #388. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 S.stipitis:298

A8IN76              	100.00%		A3LZ98              	100.00%
Bootstrap support for A8IN76 as seed ortholog is 100%.
Bootstrap support for A3LZ98 as seed ortholog is 100%.

Group of orthologs #389. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 S.stipitis:298

A8J5Z0              	100.00%		A3LWF9              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 100%.
Bootstrap support for A3LWF9 as seed ortholog is 100%.

Group of orthologs #390. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:296 S.stipitis:296

A8HM38              	100.00%		A3LQL4              	100.00%
Bootstrap support for A8HM38 as seed ortholog is 100%.
Bootstrap support for A3LQL4 as seed ortholog is 100%.

Group of orthologs #391. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 S.stipitis:197

A8J2Y5              	100.00%		A3GEX4              	100.00%
Bootstrap support for A8J2Y5 as seed ortholog is 99%.
Bootstrap support for A3GEX4 as seed ortholog is 100%.

Group of orthologs #392. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:296

A8II74              	100.00%		A3LWR7              	100.00%
Bootstrap support for A8II74 as seed ortholog is 99%.
Bootstrap support for A3LWR7 as seed ortholog is 100%.

Group of orthologs #393. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:96

A8JHQ7              	100.00%		A3LRF3              	100.00%
Bootstrap support for A8JHQ7 as seed ortholog is 99%.
Bootstrap support for A3LRF3 as seed ortholog is 99%.

Group of orthologs #394. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 S.stipitis:295

A8IVZ2              	100.00%		A3LY04              	100.00%
A8IHK0              	67.19%		
Bootstrap support for A8IVZ2 as seed ortholog is 67%.
Alternative seed ortholog is A8JIS8 (19 bits away from this cluster)
Bootstrap support for A3LY04 as seed ortholog is 100%.

Group of orthologs #395. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 S.stipitis:295

A8HVA6              	100.00%		A3LRF1              	100.00%
Bootstrap support for A8HVA6 as seed ortholog is 100%.
Bootstrap support for A3LRF1 as seed ortholog is 100%.

Group of orthologs #396. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 S.stipitis:295

A8IPI0              	100.00%		A3LRN6              	100.00%
Bootstrap support for A8IPI0 as seed ortholog is 100%.
Bootstrap support for A3LRN6 as seed ortholog is 100%.

Group of orthologs #397. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 S.stipitis:294

A8HME4              	100.00%		A3GFH5              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #398. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 S.stipitis:293

A8I982              	100.00%		A3M095              	100.00%
Bootstrap support for A8I982 as seed ortholog is 100%.
Bootstrap support for A3M095 as seed ortholog is 100%.

Group of orthologs #399. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 S.stipitis:292

A8J6K9              	100.00%		A3LP99              	100.00%
Bootstrap support for A8J6K9 as seed ortholog is 100%.
Bootstrap support for A3LP99 as seed ortholog is 100%.

Group of orthologs #400. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 S.stipitis:291

A8IY94              	100.00%		A3LW98              	100.00%
Bootstrap support for A8IY94 as seed ortholog is 100%.
Bootstrap support for A3LW98 as seed ortholog is 100%.

Group of orthologs #401. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:291

A8JF17              	100.00%		A3LZJ4              	100.00%
Bootstrap support for A8JF17 as seed ortholog is 99%.
Bootstrap support for A3LZJ4 as seed ortholog is 100%.

Group of orthologs #402. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 S.stipitis:214

A8HNP3              	100.00%		A3GH05              	100.00%
Bootstrap support for A8HNP3 as seed ortholog is 100%.
Bootstrap support for A3GH05 as seed ortholog is 100%.

Group of orthologs #403. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 S.stipitis:290

A8HY46              	100.00%		A3LPA3              	100.00%
Bootstrap support for A8HY46 as seed ortholog is 100%.
Bootstrap support for A3LPA3 as seed ortholog is 100%.

Group of orthologs #404. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 S.stipitis:290

A8J633              	100.00%		A3LPV0              	100.00%
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for A3LPV0 as seed ortholog is 100%.

Group of orthologs #405. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 S.stipitis:290

A8J2I5              	100.00%		A3LVE9              	100.00%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for A3LVE9 as seed ortholog is 100%.

Group of orthologs #406. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:289

A8IKQ0              	100.00%		A3GEU3              	100.00%
Bootstrap support for A8IKQ0 as seed ortholog is 100%.
Bootstrap support for A3GEU3 as seed ortholog is 100%.

Group of orthologs #407. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 S.stipitis:289

A8J5L0              	100.00%		A3LSE0              	100.00%
Bootstrap support for A8J5L0 as seed ortholog is 100%.
Bootstrap support for A3LSE0 as seed ortholog is 100%.

Group of orthologs #408. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:56

A8J240              	100.00%		A3LX02              	100.00%
Bootstrap support for A8J240 as seed ortholog is 97%.
Bootstrap support for A3LX02 as seed ortholog is 84%.

Group of orthologs #409. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 S.stipitis:159

A8JD99              	100.00%		A3LNW3              	100.00%
Bootstrap support for A8JD99 as seed ortholog is 100%.
Bootstrap support for A3LNW3 as seed ortholog is 99%.

Group of orthologs #410. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 S.stipitis:89

A8HN48              	100.00%		A3GID6              	100.00%
Bootstrap support for A8HN48 as seed ortholog is 100%.
Bootstrap support for A3GID6 as seed ortholog is 99%.

Group of orthologs #411. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 S.stipitis:288

A8I093              	100.00%		A3GI64              	100.00%
Bootstrap support for A8I093 as seed ortholog is 100%.
Bootstrap support for A3GI64 as seed ortholog is 100%.

Group of orthologs #412. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 S.stipitis:287

A8ILT7              	100.00%		A3GGL3              	100.00%
A8J399              	14.26%		
A8J0U2              	8.30%		
A8J0U4              	8.26%		
A8J0U0              	7.21%		
A8J0U1              	7.18%		
A8JH07              	5.73%		
Q8LP67              	5.73%		
Bootstrap support for A8ILT7 as seed ortholog is 55%.
Alternative seed ortholog is A8J993 (5 bits away from this cluster)
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #413. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 S.stipitis:287

A8J386              	100.00%		A3LNI3              	100.00%
A8HUP5              	7.52%		
Bootstrap support for A8J386 as seed ortholog is 100%.
Bootstrap support for A3LNI3 as seed ortholog is 100%.

Group of orthologs #414. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 S.stipitis:287

A8I161              	100.00%		A3LZY4              	100.00%
Bootstrap support for A8I161 as seed ortholog is 100%.
Bootstrap support for A3LZY4 as seed ortholog is 100%.

Group of orthologs #415. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:181

A8J980              	100.00%		A3LTB4              	100.00%
Bootstrap support for A8J980 as seed ortholog is 97%.
Bootstrap support for A3LTB4 as seed ortholog is 99%.

Group of orthologs #416. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:286

A8IR24              	100.00%		A3GHU0              	100.00%
                    	       		A3LUV0              	40.38%
Bootstrap support for A8IR24 as seed ortholog is 99%.
Bootstrap support for A3GHU0 as seed ortholog is 100%.

Group of orthologs #417. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 S.stipitis:286

A8HPD2              	100.00%		A3LZK5              	100.00%
Bootstrap support for A8HPD2 as seed ortholog is 100%.
Bootstrap support for A3LZK5 as seed ortholog is 100%.

Group of orthologs #418. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 S.stipitis:285

Q8LKG7              	100.00%		A3LYD2              	100.00%
A8I780              	55.32%		A3LMV3              	18.68%
                    	       		A3GI37              	14.34%
Bootstrap support for Q8LKG7 as seed ortholog is 100%.
Bootstrap support for A3LYD2 as seed ortholog is 100%.

Group of orthologs #419. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 S.stipitis:285

A8HQJ4              	100.00%		A3LN55              	100.00%
Bootstrap support for A8HQJ4 as seed ortholog is 100%.
Bootstrap support for A3LN55 as seed ortholog is 100%.

Group of orthologs #420. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 S.stipitis:285

A8IJX8              	100.00%		A3GFP3              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for A3GFP3 as seed ortholog is 100%.

Group of orthologs #421. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 S.stipitis:285

A8HYL2              	100.00%		A3LWJ5              	100.00%
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #422. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 S.stipitis:285

A8JIP6              	100.00%		A3LP90              	100.00%
Bootstrap support for A8JIP6 as seed ortholog is 100%.
Bootstrap support for A3LP90 as seed ortholog is 100%.

Group of orthologs #423. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 S.stipitis:284

A8JAY5              	100.00%		A3LUW1              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for A3LUW1 as seed ortholog is 100%.

Group of orthologs #424. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 S.stipitis:90

A7LGV1              	100.00%		A3LPQ3              	100.00%
A8JFG3              	30.96%		
Bootstrap support for A7LGV1 as seed ortholog is 100%.
Bootstrap support for A3LPQ3 as seed ortholog is 95%.

Group of orthologs #425. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 S.stipitis:283

A8J8V5              	100.00%		A3LVD0              	100.00%
Bootstrap support for A8J8V5 as seed ortholog is 100%.
Bootstrap support for A3LVD0 as seed ortholog is 100%.

Group of orthologs #426. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 S.stipitis:283

A8JGS3              	100.00%		A3LR59              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #427. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 S.stipitis:124

A8ISU1              	100.00%		A3LT96              	100.00%
Bootstrap support for A8ISU1 as seed ortholog is 99%.
Bootstrap support for A3LT96 as seed ortholog is 99%.

Group of orthologs #428. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 S.stipitis:280

A8JAA6              	100.00%		A3LYW2              	100.00%
Bootstrap support for A8JAA6 as seed ortholog is 100%.
Bootstrap support for A3LYW2 as seed ortholog is 100%.

Group of orthologs #429. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 S.stipitis:279

A8J567              	100.00%		A3GHF0              	100.00%
                    	       		A3GFN9              	82.74%
Bootstrap support for A8J567 as seed ortholog is 100%.
Bootstrap support for A3GHF0 as seed ortholog is 100%.

Group of orthologs #430. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 S.stipitis:279

A8HQF0              	100.00%		A3LT23              	100.00%
Bootstrap support for A8HQF0 as seed ortholog is 100%.
Bootstrap support for A3LT23 as seed ortholog is 100%.

Group of orthologs #431. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 S.stipitis:119

A8IW43              	100.00%		A3LP00              	100.00%
Bootstrap support for A8IW43 as seed ortholog is 100%.
Bootstrap support for A3LP00 as seed ortholog is 97%.

Group of orthologs #432. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 S.stipitis:131

A8I7N8              	100.00%		O94114              	100.00%
Bootstrap support for A8I7N8 as seed ortholog is 100%.
Bootstrap support for O94114 as seed ortholog is 99%.

Group of orthologs #433. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 S.stipitis:277

A8IAX2              	100.00%		A3LZ97              	100.00%
Bootstrap support for A8IAX2 as seed ortholog is 100%.
Bootstrap support for A3LZ97 as seed ortholog is 100%.

Group of orthologs #434. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:88

A8JB50              	100.00%		A3LYD5              	100.00%
                    	       		A3LPK9              	52.25%
Bootstrap support for A8JB50 as seed ortholog is 94%.
Bootstrap support for A3LYD5 as seed ortholog is 99%.

Group of orthologs #435. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 S.stipitis:99

A8IX13              	100.00%		A3GHZ1              	100.00%
Bootstrap support for A8IX13 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 92%.

Group of orthologs #436. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 S.stipitis:275

A8IZK3              	100.00%		A3LR93              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for A3LR93 as seed ortholog is 100%.

Group of orthologs #437. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 S.stipitis:26

A8JH58              	100.00%		A3GI75              	100.00%
A8HRV2              	11.74%		
A8IK58              	7.42%		
Bootstrap support for A8JH58 as seed ortholog is 100%.
Bootstrap support for A3GI75 as seed ortholog is 68%.
Alternative seed ortholog is A3LT24 (26 bits away from this cluster)

Group of orthologs #438. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 S.stipitis:274

A8I2G3              	100.00%		A3GHZ3              	100.00%
Bootstrap support for A8I2G3 as seed ortholog is 100%.
Bootstrap support for A3GHZ3 as seed ortholog is 100%.

Group of orthologs #439. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 S.stipitis:274

A8ID63              	100.00%		A3LPU5              	100.00%
Bootstrap support for A8ID63 as seed ortholog is 100%.
Bootstrap support for A3LPU5 as seed ortholog is 100%.

Group of orthologs #440. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 S.stipitis:274

A8J4X1              	100.00%		A3LZZ8              	100.00%
Bootstrap support for A8J4X1 as seed ortholog is 100%.
Bootstrap support for A3LZZ8 as seed ortholog is 100%.

Group of orthologs #441. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 S.stipitis:273

A8J7E8              	100.00%		A3LX74              	100.00%
A8JA94              	49.15%		
Bootstrap support for A8J7E8 as seed ortholog is 100%.
Bootstrap support for A3LX74 as seed ortholog is 100%.

Group of orthologs #442. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 S.stipitis:273

A8I901              	100.00%		A3LVB0              	100.00%
Bootstrap support for A8I901 as seed ortholog is 100%.
Bootstrap support for A3LVB0 as seed ortholog is 100%.

Group of orthologs #443. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 S.stipitis:273

A8JGX0              	100.00%		A3LYB2              	100.00%
Bootstrap support for A8JGX0 as seed ortholog is 100%.
Bootstrap support for A3LYB2 as seed ortholog is 100%.

Group of orthologs #444. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 S.stipitis:272

A8ITF3              	100.00%		A3LP67              	100.00%
Bootstrap support for A8ITF3 as seed ortholog is 100%.
Bootstrap support for A3LP67 as seed ortholog is 100%.

Group of orthologs #445. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 S.stipitis:189

A8HYR9              	100.00%		A3LMS4              	100.00%
Bootstrap support for A8HYR9 as seed ortholog is 99%.
Bootstrap support for A3LMS4 as seed ortholog is 100%.

Group of orthologs #446. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:81

A8J5R1              	100.00%		A3LWN8              	100.00%
Bootstrap support for A8J5R1 as seed ortholog is 100%.
Bootstrap support for A3LWN8 as seed ortholog is 96%.

Group of orthologs #447. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 S.stipitis:270

A8I9K8              	100.00%		A3LRR6              	100.00%
Bootstrap support for A8I9K8 as seed ortholog is 100%.
Bootstrap support for A3LRR6 as seed ortholog is 100%.

Group of orthologs #448. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 S.stipitis:270

A8ILF4              	100.00%		A3LWS6              	100.00%
Bootstrap support for A8ILF4 as seed ortholog is 100%.
Bootstrap support for A3LWS6 as seed ortholog is 100%.

Group of orthologs #449. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 S.stipitis:270

A8J3U8              	100.00%		A3LMS2              	100.00%
Bootstrap support for A8J3U8 as seed ortholog is 100%.
Bootstrap support for A3LMS2 as seed ortholog is 100%.

Group of orthologs #450. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 S.stipitis:228

A8IWL4              	100.00%		A3LX18              	100.00%
Bootstrap support for A8IWL4 as seed ortholog is 100%.
Bootstrap support for A3LX18 as seed ortholog is 100%.

Group of orthologs #451. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 S.stipitis:270

A8J0Z8              	100.00%		A3LU31              	100.00%
Bootstrap support for A8J0Z8 as seed ortholog is 100%.
Bootstrap support for A3LU31 as seed ortholog is 100%.

Group of orthologs #452. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 S.stipitis:269

A8HTE5              	100.00%		A3GEZ4              	100.00%
Bootstrap support for A8HTE5 as seed ortholog is 100%.
Bootstrap support for A3GEZ4 as seed ortholog is 100%.

Group of orthologs #453. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 S.stipitis:269

A8I4P5              	100.00%		A3LP59              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #454. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 S.stipitis:269

A8HQI6              	100.00%		A3M057              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 100%.
Bootstrap support for A3M057 as seed ortholog is 100%.

Group of orthologs #455. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 S.stipitis:269

A8JHA4              	100.00%		A3GF09              	100.00%
Bootstrap support for A8JHA4 as seed ortholog is 100%.
Bootstrap support for A3GF09 as seed ortholog is 100%.

Group of orthologs #456. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 S.stipitis:267

A8IRL9              	100.00%		A3LVH0              	100.00%
Bootstrap support for A8IRL9 as seed ortholog is 100%.
Bootstrap support for A3LVH0 as seed ortholog is 100%.

Group of orthologs #457. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 S.stipitis:266

A8IL38              	100.00%		A3LYP7              	100.00%
Bootstrap support for A8IL38 as seed ortholog is 99%.
Bootstrap support for A3LYP7 as seed ortholog is 100%.

Group of orthologs #458. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 S.stipitis:266

A8J7D9              	100.00%		A3LZ16              	100.00%
Bootstrap support for A8J7D9 as seed ortholog is 100%.
Bootstrap support for A3LZ16 as seed ortholog is 100%.

Group of orthologs #459. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 S.stipitis:266

A8JEG5              	100.00%		A3LTA0              	100.00%
Bootstrap support for A8JEG5 as seed ortholog is 100%.
Bootstrap support for A3LTA0 as seed ortholog is 100%.

Group of orthologs #460. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 S.stipitis:266

A8JGF8              	100.00%		A3LRQ6              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 100%.
Bootstrap support for A3LRQ6 as seed ortholog is 100%.

Group of orthologs #461. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:71

A8J1Y2              	100.00%		A3LY85              	100.00%
                    	       		A3GFU2              	37.21%
                    	       		A3LU84              	29.89%
Bootstrap support for A8J1Y2 as seed ortholog is 97%.
Bootstrap support for A3LY85 as seed ortholog is 93%.

Group of orthologs #462. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:100

A8IRT2              	100.00%		A3LXX3              	100.00%
Bootstrap support for A8IRT2 as seed ortholog is 99%.
Bootstrap support for A3LXX3 as seed ortholog is 99%.

Group of orthologs #463. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:264

A8ICN2              	100.00%		A3LYI9              	100.00%
A8HNN4              	54.30%		A3LU81              	39.37%
A8HNN6              	52.71%		
Bootstrap support for A8ICN2 as seed ortholog is 99%.
Bootstrap support for A3LYI9 as seed ortholog is 100%.

Group of orthologs #464. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 S.stipitis:264

A8IWJ3              	100.00%		A3LT77              	100.00%
Bootstrap support for A8IWJ3 as seed ortholog is 100%.
Bootstrap support for A3LT77 as seed ortholog is 100%.

Group of orthologs #465. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 S.stipitis:264

A8J0K7              	100.00%		A3LTL4              	100.00%
Bootstrap support for A8J0K7 as seed ortholog is 100%.
Bootstrap support for A3LTL4 as seed ortholog is 100%.

Group of orthologs #466. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 S.stipitis:130

A8J876              	100.00%		A3GHW9              	100.00%
Bootstrap support for A8J876 as seed ortholog is 82%.
Bootstrap support for A3GHW9 as seed ortholog is 99%.

Group of orthologs #467. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 S.stipitis:260

A8IRE2              	100.00%		A3LP40              	100.00%
Bootstrap support for A8IRE2 as seed ortholog is 100%.
Bootstrap support for A3LP40 as seed ortholog is 100%.

Group of orthologs #468. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:260

A8I2N1              	100.00%		A3M0L9              	100.00%
Bootstrap support for A8I2N1 as seed ortholog is 99%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #469. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:23

A8IYY0              	100.00%		A3LUH2              	100.00%
Bootstrap support for A8IYY0 as seed ortholog is 99%.
Bootstrap support for A3LUH2 as seed ortholog is 64%.
Alternative seed ortholog is A3GG57 (23 bits away from this cluster)

Group of orthologs #470. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 S.stipitis:260

Q6V9B0              	100.00%		A3GHN5              	100.00%
Bootstrap support for Q6V9B0 as seed ortholog is 100%.
Bootstrap support for A3GHN5 as seed ortholog is 100%.

Group of orthologs #471. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 S.stipitis:24

A8JBW0              	100.00%		A3LRG9              	100.00%
A8JBV2              	47.19%		
Bootstrap support for A8JBW0 as seed ortholog is 96%.
Bootstrap support for A3LRG9 as seed ortholog is 69%.
Alternative seed ortholog is A3LT83 (24 bits away from this cluster)

Group of orthologs #472. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:154

A8JBJ3              	100.00%		A3GGX4              	100.00%
Bootstrap support for A8JBJ3 as seed ortholog is 99%.
Bootstrap support for A3GGX4 as seed ortholog is 100%.

Group of orthologs #473. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 S.stipitis:258

A8I1Q7              	100.00%		A3LUK4              	100.00%
Bootstrap support for A8I1Q7 as seed ortholog is 100%.
Bootstrap support for A3LUK4 as seed ortholog is 100%.

Group of orthologs #474. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:110

A8IRR7              	100.00%		A3LWH3              	100.00%
Bootstrap support for A8IRR7 as seed ortholog is 94%.
Bootstrap support for A3LWH3 as seed ortholog is 99%.

Group of orthologs #475. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 S.stipitis:258

A8JB76              	100.00%		A3LPA6              	100.00%
Bootstrap support for A8JB76 as seed ortholog is 100%.
Bootstrap support for A3LPA6 as seed ortholog is 100%.

Group of orthologs #476. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 S.stipitis:258

A8JBN5              	100.00%		A3LPT0              	100.00%
Bootstrap support for A8JBN5 as seed ortholog is 100%.
Bootstrap support for A3LPT0 as seed ortholog is 100%.

Group of orthologs #477. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 S.stipitis:257

A8I4T2              	100.00%		A3LTA4              	100.00%
Bootstrap support for A8I4T2 as seed ortholog is 100%.
Bootstrap support for A3LTA4 as seed ortholog is 100%.

Group of orthologs #478. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 S.stipitis:257

A8JIU5              	100.00%		A3GG59              	100.00%
Bootstrap support for A8JIU5 as seed ortholog is 100%.
Bootstrap support for A3GG59 as seed ortholog is 100%.

Group of orthologs #479. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 S.stipitis:257

A8JEW4              	100.00%		A3LS43              	100.00%
Bootstrap support for A8JEW4 as seed ortholog is 100%.
Bootstrap support for A3LS43 as seed ortholog is 100%.

Group of orthologs #480. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 S.stipitis:15

A8J7X9              	100.00%		A3LZW5              	100.00%
Bootstrap support for A8J7X9 as seed ortholog is 99%.
Bootstrap support for A3LZW5 as seed ortholog is 68%.
Alternative seed ortholog is A3LQQ1 (15 bits away from this cluster)

Group of orthologs #481. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 S.stipitis:256

A8I7S0              	100.00%		A3LTF5              	100.00%
Bootstrap support for A8I7S0 as seed ortholog is 99%.
Bootstrap support for A3LTF5 as seed ortholog is 100%.

Group of orthologs #482. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 S.stipitis:256

A8J9V0              	100.00%		A3GEZ2              	100.00%
Bootstrap support for A8J9V0 as seed ortholog is 100%.
Bootstrap support for A3GEZ2 as seed ortholog is 100%.

Group of orthologs #483. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 S.stipitis:256

A8J2N5              	100.00%		A3LQH4              	100.00%
Bootstrap support for A8J2N5 as seed ortholog is 100%.
Bootstrap support for A3LQH4 as seed ortholog is 100%.

Group of orthologs #484. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 S.stipitis:146

A8J1A0              	100.00%		A3LXG1              	100.00%
Bootstrap support for A8J1A0 as seed ortholog is 99%.
Bootstrap support for A3LXG1 as seed ortholog is 99%.

Group of orthologs #485. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 S.stipitis:255

A8JDY3              	100.00%		A3LZW0              	100.00%
Bootstrap support for A8JDY3 as seed ortholog is 100%.
Bootstrap support for A3LZW0 as seed ortholog is 100%.

Group of orthologs #486. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 S.stipitis:254

A8JDZ0              	100.00%		A3M0L4              	100.00%
Bootstrap support for A8JDZ0 as seed ortholog is 100%.
Bootstrap support for A3M0L4 as seed ortholog is 100%.

Group of orthologs #487. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:253

A8JB97              	100.00%		A3GH96              	100.00%
                    	       		A3GH98              	100.00%
Bootstrap support for A8JB97 as seed ortholog is 92%.
Bootstrap support for A3GH96 as seed ortholog is 100%.
Bootstrap support for A3GH98 as seed ortholog is 100%.

Group of orthologs #488. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 S.stipitis:129

A8IC07              	100.00%		A3LMT1              	100.00%
Bootstrap support for A8IC07 as seed ortholog is 100%.
Bootstrap support for A3LMT1 as seed ortholog is 99%.

Group of orthologs #489. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:83

A8IIN4              	100.00%		A3LNS1              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 99%.
Bootstrap support for A3LNS1 as seed ortholog is 93%.

Group of orthologs #490. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 S.stipitis:253

A8I1A7              	100.00%		A3LVY9              	100.00%
Bootstrap support for A8I1A7 as seed ortholog is 100%.
Bootstrap support for A3LVY9 as seed ortholog is 100%.

Group of orthologs #491. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 S.stipitis:253

A8IE29              	100.00%		A3LTQ5              	100.00%
Bootstrap support for A8IE29 as seed ortholog is 100%.
Bootstrap support for A3LTQ5 as seed ortholog is 100%.

Group of orthologs #492. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:37

A8IZJ9              	100.00%		A3LNM7              	100.00%
Bootstrap support for A8IZJ9 as seed ortholog is 89%.
Bootstrap support for A3LNM7 as seed ortholog is 86%.

Group of orthologs #493. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 S.stipitis:253

A8ITI8              	100.00%		A3LYM1              	100.00%
Bootstrap support for A8ITI8 as seed ortholog is 100%.
Bootstrap support for A3LYM1 as seed ortholog is 100%.

Group of orthologs #494. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 S.stipitis:252

A8J0V5              	100.00%		A3LW04              	100.00%
Bootstrap support for A8J0V5 as seed ortholog is 100%.
Bootstrap support for A3LW04 as seed ortholog is 100%.

Group of orthologs #495. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 S.stipitis:252

A8JDM6              	100.00%		A3GF99              	100.00%
Bootstrap support for A8JDM6 as seed ortholog is 100%.
Bootstrap support for A3GF99 as seed ortholog is 100%.

Group of orthologs #496. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 S.stipitis:252

A8J7F8              	100.00%		A3LS15              	100.00%
Bootstrap support for A8J7F8 as seed ortholog is 100%.
Bootstrap support for A3LS15 as seed ortholog is 100%.

Group of orthologs #497. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 S.stipitis:252

A8J7F2              	100.00%		A3LSX3              	100.00%
Bootstrap support for A8J7F2 as seed ortholog is 100%.
Bootstrap support for A3LSX3 as seed ortholog is 100%.

Group of orthologs #498. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 S.stipitis:251

A8IL68              	100.00%		A3LNS6              	100.00%
Bootstrap support for A8IL68 as seed ortholog is 100%.
Bootstrap support for A3LNS6 as seed ortholog is 100%.

Group of orthologs #499. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 S.stipitis:251

A8I0A0              	100.00%		A3LXW4              	100.00%
Bootstrap support for A8I0A0 as seed ortholog is 100%.
Bootstrap support for A3LXW4 as seed ortholog is 100%.

Group of orthologs #500. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 S.stipitis:250

A8ISC5              	100.00%		A3LXL1              	100.00%
Bootstrap support for A8ISC5 as seed ortholog is 61%.
Alternative seed ortholog is A8J8Y2 (9 bits away from this cluster)
Bootstrap support for A3LXL1 as seed ortholog is 100%.

Group of orthologs #501. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 S.stipitis:250

A8J2W1              	100.00%		A3LYW1              	100.00%
Bootstrap support for A8J2W1 as seed ortholog is 100%.
Bootstrap support for A3LYW1 as seed ortholog is 100%.

Group of orthologs #502. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 S.stipitis:111

A8JCH8              	100.00%		A3LX59              	100.00%
Bootstrap support for A8JCH8 as seed ortholog is 100%.
Bootstrap support for A3LX59 as seed ortholog is 93%.

Group of orthologs #503. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 S.stipitis:249

A8JH50              	100.00%		A3GF56              	100.00%
Bootstrap support for A8JH50 as seed ortholog is 100%.
Bootstrap support for A3GF56 as seed ortholog is 100%.

Group of orthologs #504. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 S.stipitis:248

A8ICB3              	100.00%		A3GI79              	100.00%
Bootstrap support for A8ICB3 as seed ortholog is 100%.
Bootstrap support for A3GI79 as seed ortholog is 100%.

Group of orthologs #505. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 S.stipitis:248

A8IJ34              	100.00%		A3GHB4              	100.00%
Bootstrap support for A8IJ34 as seed ortholog is 100%.
Bootstrap support for A3GHB4 as seed ortholog is 100%.

Group of orthologs #506. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 S.stipitis:66

A8J308              	100.00%		A3GF86              	100.00%
Bootstrap support for A8J308 as seed ortholog is 100%.
Bootstrap support for A3GF86 as seed ortholog is 98%.

Group of orthologs #507. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 S.stipitis:248

A8ISG1              	100.00%		A3LWN0              	100.00%
Bootstrap support for A8ISG1 as seed ortholog is 100%.
Bootstrap support for A3LWN0 as seed ortholog is 100%.

Group of orthologs #508. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 S.stipitis:248

A8J425              	100.00%		A3LVE6              	100.00%
Bootstrap support for A8J425 as seed ortholog is 100%.
Bootstrap support for A3LVE6 as seed ortholog is 100%.

Group of orthologs #509. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:247

A8I3V3              	100.00%		A3GI41              	100.00%
A8IXF1              	47.09%		
Bootstrap support for A8I3V3 as seed ortholog is 100%.
Bootstrap support for A3GI41 as seed ortholog is 100%.

Group of orthologs #510. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:247

A8IEL8              	100.00%		A3GI48              	100.00%
                    	       		A3GF29              	31.39%
Bootstrap support for A8IEL8 as seed ortholog is 100%.
Bootstrap support for A3GI48 as seed ortholog is 100%.

Group of orthologs #511. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:247

A8IVD4              	100.00%		A3LR21              	100.00%
A8J7L6              	37.39%		
Bootstrap support for A8IVD4 as seed ortholog is 100%.
Bootstrap support for A3LR21 as seed ortholog is 100%.

Group of orthologs #512. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:247

A8I3J7              	100.00%		A3LRB1              	100.00%
Bootstrap support for A8I3J7 as seed ortholog is 100%.
Bootstrap support for A3LRB1 as seed ortholog is 100%.

Group of orthologs #513. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:145

A8IVE2              	100.00%		A3GFU4              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for A3GFU4 as seed ortholog is 100%.

Group of orthologs #514. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:247

A8IYG7              	100.00%		A3GI99              	100.00%
Bootstrap support for A8IYG7 as seed ortholog is 100%.
Bootstrap support for A3GI99 as seed ortholog is 100%.

Group of orthologs #515. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 S.stipitis:247

A8J149              	100.00%		A3LQV5              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for A3LQV5 as seed ortholog is 100%.

Group of orthologs #516. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 S.stipitis:246

A8I629              	100.00%		A3LQV1              	100.00%
Bootstrap support for A8I629 as seed ortholog is 100%.
Bootstrap support for A3LQV1 as seed ortholog is 100%.

Group of orthologs #517. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 S.stipitis:246

A8I665              	100.00%		A3LS77              	100.00%
Bootstrap support for A8I665 as seed ortholog is 100%.
Bootstrap support for A3LS77 as seed ortholog is 100%.

Group of orthologs #518. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:246

A8IXB8              	100.00%		A3LX15              	100.00%
Bootstrap support for A8IXB8 as seed ortholog is 99%.
Bootstrap support for A3LX15 as seed ortholog is 100%.

Group of orthologs #519. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:120

A8J0Y2              	100.00%		A3LW51              	100.00%
Bootstrap support for A8J0Y2 as seed ortholog is 96%.
Bootstrap support for A3LW51 as seed ortholog is 99%.

Group of orthologs #520. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:245

A8JBH0              	100.00%		A3LRF7              	100.00%
                    	       		A3LR17              	9.60%
Bootstrap support for A8JBH0 as seed ortholog is 93%.
Bootstrap support for A3LRF7 as seed ortholog is 100%.

Group of orthologs #521. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 S.stipitis:185

A8HQY5              	100.00%		A3GGB8              	100.00%
Bootstrap support for A8HQY5 as seed ortholog is 100%.
Bootstrap support for A3GGB8 as seed ortholog is 100%.

Group of orthologs #522. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 S.stipitis:245

A8I5X1              	100.00%		A3LQN6              	100.00%
Bootstrap support for A8I5X1 as seed ortholog is 100%.
Bootstrap support for A3LQN6 as seed ortholog is 100%.

Group of orthologs #523. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 S.stipitis:245

A8J1G8              	100.00%		A3GGD3              	100.00%
Bootstrap support for A8J1G8 as seed ortholog is 100%.
Bootstrap support for A3GGD3 as seed ortholog is 100%.

Group of orthologs #524. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 S.stipitis:245

A8J7E9              	100.00%		A3LMZ4              	100.00%
Bootstrap support for A8J7E9 as seed ortholog is 99%.
Bootstrap support for A3LMZ4 as seed ortholog is 100%.

Group of orthologs #525. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 S.stipitis:244

A8IAS5              	100.00%		A3GI83              	100.00%
                    	       		A3GEX0              	23.32%
                    	       		A3LTY9              	22.78%
Bootstrap support for A8IAS5 as seed ortholog is 99%.
Bootstrap support for A3GI83 as seed ortholog is 100%.

Group of orthologs #526. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 S.stipitis:244

A8IFE2              	100.00%		A3GF21              	100.00%
                    	       		A3GGL8              	63.25%
Bootstrap support for A8IFE2 as seed ortholog is 100%.
Bootstrap support for A3GF21 as seed ortholog is 100%.

Group of orthologs #527. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 S.stipitis:187

A8IB25              	100.00%		A3LRZ0              	100.00%
Bootstrap support for A8IB25 as seed ortholog is 100%.
Bootstrap support for A3LRZ0 as seed ortholog is 100%.

Group of orthologs #528. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 S.stipitis:243

A8HP17              	100.00%		A3LY31              	100.00%
Bootstrap support for A8HP17 as seed ortholog is 100%.
Bootstrap support for A3LY31 as seed ortholog is 100%.

Group of orthologs #529. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 S.stipitis:243

A8HY57              	100.00%		A3LWK2              	100.00%
Bootstrap support for A8HY57 as seed ortholog is 100%.
Bootstrap support for A3LWK2 as seed ortholog is 100%.

Group of orthologs #530. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 S.stipitis:243

A8IN95              	100.00%		A3LPI7              	100.00%
Bootstrap support for A8IN95 as seed ortholog is 100%.
Bootstrap support for A3LPI7 as seed ortholog is 100%.

Group of orthologs #531. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 S.stipitis:243

A8I7W6              	100.00%		A3LVC9              	100.00%
Bootstrap support for A8I7W6 as seed ortholog is 100%.
Bootstrap support for A3LVC9 as seed ortholog is 100%.

Group of orthologs #532. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 S.stipitis:87

A8IZL5              	100.00%		A3LPJ7              	100.00%
Bootstrap support for A8IZL5 as seed ortholog is 100%.
Bootstrap support for A3LPJ7 as seed ortholog is 98%.

Group of orthologs #533. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 S.stipitis:173

A8J3T9              	100.00%		A3LVK2              	100.00%
Bootstrap support for A8J3T9 as seed ortholog is 100%.
Bootstrap support for A3LVK2 as seed ortholog is 100%.

Group of orthologs #534. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 S.stipitis:168

A8JFH6              	100.00%		A3GHF5              	100.00%
Bootstrap support for A8JFH6 as seed ortholog is 99%.
Bootstrap support for A3GHF5 as seed ortholog is 99%.

Group of orthologs #535. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 S.stipitis:240

A8HXA6              	100.00%		A3LR48              	100.00%
A8J448              	5.76%		A3GI90              	17.89%
Bootstrap support for A8HXA6 as seed ortholog is 97%.
Bootstrap support for A3LR48 as seed ortholog is 100%.

Group of orthologs #536. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 S.stipitis:189

A8IK69              	100.00%		A3LRU7              	100.00%
Bootstrap support for A8IK69 as seed ortholog is 99%.
Bootstrap support for A3LRU7 as seed ortholog is 100%.

Group of orthologs #537. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:141

A8JC30              	100.00%		A3LTA2              	100.00%
Bootstrap support for A8JC30 as seed ortholog is 100%.
Bootstrap support for A3LTA2 as seed ortholog is 100%.

Group of orthologs #538. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 S.stipitis:239

A8HR70              	100.00%		A3GG79              	100.00%
Bootstrap support for A8HR70 as seed ortholog is 100%.
Bootstrap support for A3GG79 as seed ortholog is 100%.

Group of orthologs #539. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 S.stipitis:239

A8IDI5              	100.00%		A3LN57              	100.00%
Bootstrap support for A8IDI5 as seed ortholog is 100%.
Bootstrap support for A3LN57 as seed ortholog is 100%.

Group of orthologs #540. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 S.stipitis:239

A8JCT4              	100.00%		A3LSB1              	100.00%
Bootstrap support for A8JCT4 as seed ortholog is 100%.
Bootstrap support for A3LSB1 as seed ortholog is 100%.

Group of orthologs #541. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 S.stipitis:13

A8IZ93              	100.00%		A3GG91              	100.00%
                    	       		A3LTI2              	48.24%
Bootstrap support for A8IZ93 as seed ortholog is 100%.
Bootstrap support for A3GG91 as seed ortholog is 99%.

Group of orthologs #542. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:238

A8JGM8              	100.00%		A3LVT2              	100.00%
Bootstrap support for A8JGM8 as seed ortholog is 96%.
Bootstrap support for A3LVT2 as seed ortholog is 100%.

Group of orthologs #543. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 S.stipitis:52

A8J434              	100.00%		A3LRC4              	100.00%
A8IEE5              	34.43%		
A8ISA9              	31.13%		
Bootstrap support for A8J434 as seed ortholog is 100%.
Bootstrap support for A3LRC4 as seed ortholog is 89%.

Group of orthologs #544. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 S.stipitis:237

A8HVQ1              	100.00%		A3LT20              	100.00%
Bootstrap support for A8HVQ1 as seed ortholog is 100%.
Bootstrap support for A3LT20 as seed ortholog is 100%.

Group of orthologs #545. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:115

A8HPT5              	100.00%		A3LXZ2              	100.00%
Bootstrap support for A8HPT5 as seed ortholog is 94%.
Bootstrap support for A3LXZ2 as seed ortholog is 67%.
Alternative seed ortholog is A3LSH0 (115 bits away from this cluster)

Group of orthologs #546. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 S.stipitis:237

A8HWI6              	100.00%		A3LY94              	100.00%
Bootstrap support for A8HWI6 as seed ortholog is 100%.
Bootstrap support for A3LY94 as seed ortholog is 100%.

Group of orthologs #547. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 S.stipitis:237

A8IYI0              	100.00%		A3GGU6              	100.00%
Bootstrap support for A8IYI0 as seed ortholog is 91%.
Bootstrap support for A3GGU6 as seed ortholog is 100%.

Group of orthologs #548. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 S.stipitis:21

A8J018              	100.00%		A3LN13              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for A3LN13 as seed ortholog is 59%.
Alternative seed ortholog is A3M0P3 (21 bits away from this cluster)

Group of orthologs #549. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 S.stipitis:237

A8JFD5              	100.00%		A3LR62              	100.00%
Bootstrap support for A8JFD5 as seed ortholog is 100%.
Bootstrap support for A3LR62 as seed ortholog is 100%.

Group of orthologs #550. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 S.stipitis:237

Q6V9B1              	100.00%		A3LRW9              	100.00%
Bootstrap support for Q6V9B1 as seed ortholog is 100%.
Bootstrap support for A3LRW9 as seed ortholog is 100%.

Group of orthologs #551. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:92

A8HN42              	100.00%		A3LXT6              	100.00%
Bootstrap support for A8HN42 as seed ortholog is 99%.
Bootstrap support for A3LXT6 as seed ortholog is 99%.

Group of orthologs #552. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 S.stipitis:236

A8IKV5              	100.00%		A3GH30              	100.00%
Bootstrap support for A8IKV5 as seed ortholog is 59%.
Alternative seed ortholog is A8HRQ4 (7 bits away from this cluster)
Bootstrap support for A3GH30 as seed ortholog is 100%.

Group of orthologs #553. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:123

A8HNC2              	100.00%		A3LRT1              	100.00%
                    	       		A3LSP1              	40.66%
Bootstrap support for A8HNC2 as seed ortholog is 99%.
Bootstrap support for A3LRT1 as seed ortholog is 99%.

Group of orthologs #554. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 S.stipitis:235

A8IRV0              	100.00%		A3LZA2              	100.00%
Bootstrap support for A8IRV0 as seed ortholog is 100%.
Bootstrap support for A3LZA2 as seed ortholog is 100%.

Group of orthologs #555. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 S.stipitis:235

A8J768              	100.00%		A3LQJ1              	100.00%
Bootstrap support for A8J768 as seed ortholog is 100%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #556. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 S.stipitis:235

A8J326              	100.00%		A3LWE2              	100.00%
Bootstrap support for A8J326 as seed ortholog is 99%.
Bootstrap support for A3LWE2 as seed ortholog is 100%.

Group of orthologs #557. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 S.stipitis:235

A8JED2              	100.00%		A3LPA2              	100.00%
Bootstrap support for A8JED2 as seed ortholog is 100%.
Bootstrap support for A3LPA2 as seed ortholog is 100%.

Group of orthologs #558. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 S.stipitis:234

A8I843              	100.00%		A3LUY5              	100.00%
Bootstrap support for A8I843 as seed ortholog is 100%.
Bootstrap support for A3LUY5 as seed ortholog is 100%.

Group of orthologs #559. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 S.stipitis:234

A8I9D0              	100.00%		A3LZ81              	100.00%
Bootstrap support for A8I9D0 as seed ortholog is 99%.
Bootstrap support for A3LZ81 as seed ortholog is 100%.

Group of orthologs #560. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 S.stipitis:234

Q5S7Y5              	100.00%		A3LZL0              	100.00%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #561. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 S.stipitis:88

A8IX47              	100.00%		A3LSQ4              	100.00%
A8IX35              	69.01%		A3LT79              	17.90%
                    	       		A3GHR6              	13.81%
                    	       		A3GHL4              	12.26%
                    	       		A3LSI9              	11.87%
Bootstrap support for A8IX47 as seed ortholog is 85%.
Bootstrap support for A3LSQ4 as seed ortholog is 98%.

Group of orthologs #562. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 S.stipitis:233

A8HSA7              	100.00%		A3LXD5              	100.00%
A8IK09              	100.00%		A3GHN6              	76.67%
A8J9M0              	100.00%		
A8HWY2              	93.10%		
Bootstrap support for A8HSA7 as seed ortholog is 99%.
Bootstrap support for A8IK09 as seed ortholog is 99%.
Bootstrap support for A8J9M0 as seed ortholog is 99%.
Bootstrap support for A3LXD5 as seed ortholog is 100%.

Group of orthologs #563. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 S.stipitis:233

A8HTX4              	100.00%		A3LWA7              	100.00%
Bootstrap support for A8HTX4 as seed ortholog is 100%.
Bootstrap support for A3LWA7 as seed ortholog is 100%.

Group of orthologs #564. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 S.stipitis:233

A8IUL5              	100.00%		A3LPM2              	100.00%
Bootstrap support for A8IUL5 as seed ortholog is 99%.
Bootstrap support for A3LPM2 as seed ortholog is 100%.

Group of orthologs #565. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 S.stipitis:233

A8IMY5              	100.00%		A3M0I8              	100.00%
Bootstrap support for A8IMY5 as seed ortholog is 100%.
Bootstrap support for A3M0I8 as seed ortholog is 100%.

Group of orthologs #566. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 S.stipitis:232

A8IAK4              	100.00%		A3LMT5              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 100%.
Bootstrap support for A3LMT5 as seed ortholog is 100%.

Group of orthologs #567. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:153

A8HQ77              	100.00%		A3LZD6              	100.00%
Bootstrap support for A8HQ77 as seed ortholog is 100%.
Bootstrap support for A3LZD6 as seed ortholog is 100%.

Group of orthologs #568. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 S.stipitis:232

A8JAS9              	100.00%		A3GGM5              	100.00%
Bootstrap support for A8JAS9 as seed ortholog is 100%.
Bootstrap support for A3GGM5 as seed ortholog is 100%.

Group of orthologs #569. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 S.stipitis:232

A8J0I7              	100.00%		A3LX09              	100.00%
Bootstrap support for A8J0I7 as seed ortholog is 100%.
Bootstrap support for A3LX09 as seed ortholog is 100%.

Group of orthologs #570. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 S.stipitis:232

A8J8U1              	100.00%		A3LW27              	100.00%
Bootstrap support for A8J8U1 as seed ortholog is 100%.
Bootstrap support for A3LW27 as seed ortholog is 100%.

Group of orthologs #571. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 S.stipitis:140

A8I2V3              	100.00%		A3LQ08              	100.00%
A8JIT5              	8.88%		
Q9FE86              	6.51%		
Bootstrap support for A8I2V3 as seed ortholog is 100%.
Bootstrap support for A3LQ08 as seed ortholog is 100%.

Group of orthologs #572. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 S.stipitis:67

A8JD64              	100.00%		A3LPG3              	100.00%
A8J282              	19.55%		
Bootstrap support for A8JD64 as seed ortholog is 73%.
Alternative seed ortholog is A8JDL5 (13 bits away from this cluster)
Bootstrap support for A3LPG3 as seed ortholog is 99%.

Group of orthologs #573. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 S.stipitis:84

A8IBU9              	100.00%		A3LR45              	100.00%
Bootstrap support for A8IBU9 as seed ortholog is 100%.
Bootstrap support for A3LR45 as seed ortholog is 96%.

Group of orthologs #574. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 S.stipitis:231

A8HN92              	100.00%		P49434              	100.00%
Bootstrap support for A8HN92 as seed ortholog is 100%.
Bootstrap support for P49434 as seed ortholog is 100%.

Group of orthologs #575. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 S.stipitis:62

A8IF80              	100.00%		A3LN94              	100.00%
Bootstrap support for A8IF80 as seed ortholog is 100%.
Bootstrap support for A3LN94 as seed ortholog is 98%.

Group of orthologs #576. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:230

A8JF53              	100.00%		A3LY49              	100.00%
Bootstrap support for A8JF53 as seed ortholog is 99%.
Bootstrap support for A3LY49 as seed ortholog is 100%.

Group of orthologs #577. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 S.stipitis:229

A8IEP3              	100.00%		A3GH22              	100.00%
Bootstrap support for A8IEP3 as seed ortholog is 100%.
Bootstrap support for A3GH22 as seed ortholog is 100%.

Group of orthologs #578. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 S.stipitis:229

A8IGY1              	100.00%		A3LUZ2              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for A3LUZ2 as seed ortholog is 100%.

Group of orthologs #579. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 S.stipitis:229

A8JGW6              	100.00%		A3LZJ1              	100.00%
Bootstrap support for A8JGW6 as seed ortholog is 100%.
Bootstrap support for A3LZJ1 as seed ortholog is 100%.

Group of orthologs #580. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 S.stipitis:58

A8IHT5              	100.00%		A3LTF0              	100.00%
                    	       		A3LZW6              	28.82%
Bootstrap support for A8IHT5 as seed ortholog is 100%.
Bootstrap support for A3LTF0 as seed ortholog is 73%.
Alternative seed ortholog is A3LP57 (58 bits away from this cluster)

Group of orthologs #581. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 S.stipitis:228

A8J593              	100.00%		A3LT92              	100.00%
Bootstrap support for A8J593 as seed ortholog is 100%.
Bootstrap support for A3LT92 as seed ortholog is 100%.

Group of orthologs #582. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:228

A8J7Z6              	100.00%		A3LTK8              	100.00%
Bootstrap support for A8J7Z6 as seed ortholog is 99%.
Bootstrap support for A3LTK8 as seed ortholog is 100%.

Group of orthologs #583. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 S.stipitis:228

A8JHX0              	100.00%		A3GG94              	100.00%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for A3GG94 as seed ortholog is 100%.

Group of orthologs #584. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 S.stipitis:227

A8IYH8              	100.00%		A3GH67              	100.00%
Bootstrap support for A8IYH8 as seed ortholog is 100%.
Bootstrap support for A3GH67 as seed ortholog is 100%.

Group of orthologs #585. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 S.stipitis:227

A8IXD1              	100.00%		A3LRF5              	100.00%
Bootstrap support for A8IXD1 as seed ortholog is 100%.
Bootstrap support for A3LRF5 as seed ortholog is 100%.

Group of orthologs #586. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 S.stipitis:227

A8JHH1              	100.00%		A3GGY9              	100.00%
Bootstrap support for A8JHH1 as seed ortholog is 100%.
Bootstrap support for A3GGY9 as seed ortholog is 100%.

Group of orthologs #587. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:227

A8JII8              	100.00%		A3LMX2              	100.00%
Bootstrap support for A8JII8 as seed ortholog is 93%.
Bootstrap support for A3LMX2 as seed ortholog is 100%.

Group of orthologs #588. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 S.stipitis:226

A8IA18              	100.00%		A3GHI8              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for A3GHI8 as seed ortholog is 100%.

Group of orthologs #589. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 S.stipitis:226

A8IB12              	100.00%		A3LP86              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 100%.
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #590. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 S.stipitis:225

A8HQT5              	100.00%		A3LWH6              	100.00%
Bootstrap support for A8HQT5 as seed ortholog is 100%.
Bootstrap support for A3LWH6 as seed ortholog is 100%.

Group of orthologs #591. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:68

A8IL60              	100.00%		A3LTU9              	100.00%
Bootstrap support for A8IL60 as seed ortholog is 100%.
Bootstrap support for A3LTU9 as seed ortholog is 97%.

Group of orthologs #592. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 S.stipitis:225

A8J2J9              	100.00%		A3GIC9              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #593. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 S.stipitis:225

A8JBD9              	100.00%		A3LTN2              	100.00%
Bootstrap support for A8JBD9 as seed ortholog is 100%.
Bootstrap support for A3LTN2 as seed ortholog is 100%.

Group of orthologs #594. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 S.stipitis:224

A8IA42              	100.00%		A3LW87              	100.00%
A8JC21              	31.38%		
A8I9S9              	17.55%		
Bootstrap support for A8IA42 as seed ortholog is 100%.
Bootstrap support for A3LW87 as seed ortholog is 100%.

Group of orthologs #595. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 S.stipitis:224

A8IMN5              	100.00%		A3GGA8              	100.00%
Bootstrap support for A8IMN5 as seed ortholog is 100%.
Bootstrap support for A3GGA8 as seed ortholog is 100%.

Group of orthologs #596. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:224

A8IYJ4              	100.00%		A3LMT4              	100.00%
Bootstrap support for A8IYJ4 as seed ortholog is 91%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #597. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 S.stipitis:224

A8JJ26              	100.00%		A3GHJ9              	100.00%
Bootstrap support for A8JJ26 as seed ortholog is 95%.
Bootstrap support for A3GHJ9 as seed ortholog is 100%.

Group of orthologs #598. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 S.stipitis:223

A8IJQ4              	100.00%		A3LQK6              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for A3LQK6 as seed ortholog is 100%.

Group of orthologs #599. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 S.stipitis:223

A8J1Q1              	100.00%		A3GF08              	100.00%
Bootstrap support for A8J1Q1 as seed ortholog is 100%.
Bootstrap support for A3GF08 as seed ortholog is 100%.

Group of orthologs #600. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 S.stipitis:223

A8J6N3              	100.00%		A3LYR5              	100.00%
Bootstrap support for A8J6N3 as seed ortholog is 100%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #601. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 S.stipitis:223

A8JG68              	100.00%		A3LVJ1              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for A3LVJ1 as seed ortholog is 100%.

Group of orthologs #602. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:222

A8HQ81              	100.00%		A3LVZ0              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 100%.
Bootstrap support for A3LVZ0 as seed ortholog is 100%.

Group of orthologs #603. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:222

A8IVU0              	100.00%		A3GFB5              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for A3GFB5 as seed ortholog is 100%.

Group of orthologs #604. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:222

A8IIM2              	100.00%		A3LWM9              	100.00%
Bootstrap support for A8IIM2 as seed ortholog is 100%.
Bootstrap support for A3LWM9 as seed ortholog is 100%.

Group of orthologs #605. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 S.stipitis:150

A8IT96              	100.00%		A3LYI5              	100.00%
Bootstrap support for A8IT96 as seed ortholog is 99%.
Bootstrap support for A3LYI5 as seed ortholog is 100%.

Group of orthologs #606. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 S.stipitis:222

A8J9W0              	100.00%		A3LT69              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 100%.
Bootstrap support for A3LT69 as seed ortholog is 100%.

Group of orthologs #607. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 S.stipitis:10

A8J9T9              	100.00%		A3LUB9              	100.00%
Bootstrap support for A8J9T9 as seed ortholog is 70%.
Alternative seed ortholog is A8JEV2 (24 bits away from this cluster)
Bootstrap support for A3LUB9 as seed ortholog is 57%.
Alternative seed ortholog is A3LXB7 (10 bits away from this cluster)

Group of orthologs #608. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:221 S.stipitis:221

A8J597              	100.00%		A3GHB0              	100.00%
Bootstrap support for A8J597 as seed ortholog is 100%.
Bootstrap support for A3GHB0 as seed ortholog is 100%.

Group of orthologs #609. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 S.stipitis:221

A8J3C4              	100.00%		A3LTN5              	100.00%
Bootstrap support for A8J3C4 as seed ortholog is 99%.
Bootstrap support for A3LTN5 as seed ortholog is 100%.

Group of orthologs #610. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 S.stipitis:8

A8IS13              	100.00%		A3LVF9              	100.00%
A8HSX7              	57.44%		
Bootstrap support for A8IS13 as seed ortholog is 100%.
Bootstrap support for A3LVF9 as seed ortholog is 61%.
Alternative seed ortholog is A3LPT4 (8 bits away from this cluster)

Group of orthologs #611. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 S.stipitis:220

A8IHL3              	100.00%		A3M007              	100.00%
Bootstrap support for A8IHL3 as seed ortholog is 100%.
Bootstrap support for A3M007 as seed ortholog is 100%.

Group of orthologs #612. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 S.stipitis:71

A8IWJ5              	100.00%		A3LY66              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 100%.
Bootstrap support for A3LY66 as seed ortholog is 93%.

Group of orthologs #613. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 S.stipitis:220

A8J8T5              	100.00%		A3LVW8              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for A3LVW8 as seed ortholog is 100%.

Group of orthologs #614. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 S.stipitis:123

A8JFI8              	100.00%		A3LY45              	100.00%
Bootstrap support for A8JFI8 as seed ortholog is 99%.
Bootstrap support for A3LY45 as seed ortholog is 100%.

Group of orthologs #615. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 S.stipitis:219

A8JCM8              	100.00%		A3LRH9              	100.00%
Bootstrap support for A8JCM8 as seed ortholog is 100%.
Bootstrap support for A3LRH9 as seed ortholog is 100%.

Group of orthologs #616. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 S.stipitis:218

Q19VH4              	100.00%		A3M051              	100.00%
Q19VH5              	92.59%		A3LTQ9              	36.32%
A8I0H0              	44.44%		A3M050              	27.89%
A8I0G7              	14.81%		A3LTQ8              	24.21%
Bootstrap support for Q19VH4 as seed ortholog is 100%.
Bootstrap support for A3M051 as seed ortholog is 100%.

Group of orthologs #617. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:145

A8HQ87              	100.00%		A3LRC8              	100.00%
Bootstrap support for A8HQ87 as seed ortholog is 99%.
Bootstrap support for A3LRC8 as seed ortholog is 100%.

Group of orthologs #618. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 S.stipitis:218

A8IR74              	100.00%		A3LSH4              	100.00%
Bootstrap support for A8IR74 as seed ortholog is 100%.
Bootstrap support for A3LSH4 as seed ortholog is 100%.

Group of orthologs #619. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 S.stipitis:218

A8IV36              	100.00%		A3LR94              	100.00%
Bootstrap support for A8IV36 as seed ortholog is 100%.
Bootstrap support for A3LR94 as seed ortholog is 100%.

Group of orthologs #620. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 S.stipitis:218

A8IZE1              	100.00%		A3LR90              	100.00%
Bootstrap support for A8IZE1 as seed ortholog is 100%.
Bootstrap support for A3LR90 as seed ortholog is 100%.

Group of orthologs #621. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 S.stipitis:146

A8HQU6              	100.00%		A3LUM6              	100.00%
Bootstrap support for A8HQU6 as seed ortholog is 99%.
Bootstrap support for A3LUM6 as seed ortholog is 99%.

Group of orthologs #622. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 S.stipitis:216

A8ICC8              	100.00%		A3LTU4              	100.00%
                    	       		A3LQ79              	17.60%
Bootstrap support for A8ICC8 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 100%.

Group of orthologs #623. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 S.stipitis:215

A8IIJ6              	100.00%		A3LQV2              	100.00%
A8IIJ1              	5.22%		
Bootstrap support for A8IIJ6 as seed ortholog is 99%.
Bootstrap support for A3LQV2 as seed ortholog is 100%.

Group of orthologs #624. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:24

A8HS43              	100.00%		A3LW70              	100.00%
Bootstrap support for A8HS43 as seed ortholog is 95%.
Bootstrap support for A3LW70 as seed ortholog is 70%.
Alternative seed ortholog is A3LRC1 (24 bits away from this cluster)

Group of orthologs #625. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:81

A8ILX2              	100.00%		A3LTR3              	100.00%
Bootstrap support for A8ILX2 as seed ortholog is 99%.
Bootstrap support for A3LTR3 as seed ortholog is 99%.

Group of orthologs #626. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 S.stipitis:214

A8HSZ0              	100.00%		A3LNM6              	100.00%
Bootstrap support for A8HSZ0 as seed ortholog is 100%.
Bootstrap support for A3LNM6 as seed ortholog is 100%.

Group of orthologs #627. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 S.stipitis:214

A8IR47              	100.00%		A3LVU3              	100.00%
Bootstrap support for A8IR47 as seed ortholog is 100%.
Bootstrap support for A3LVU3 as seed ortholog is 100%.

Group of orthologs #628. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 S.stipitis:214

A8IWJ1              	100.00%		A3LYH1              	100.00%
Bootstrap support for A8IWJ1 as seed ortholog is 100%.
Bootstrap support for A3LYH1 as seed ortholog is 100%.

Group of orthologs #629. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 S.stipitis:213

A8HR57              	100.00%		A3LSW5              	100.00%
                    	       		A3LND4              	8.61%
Bootstrap support for A8HR57 as seed ortholog is 100%.
Bootstrap support for A3LSW5 as seed ortholog is 100%.

Group of orthologs #630. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:213

A8HQG9              	100.00%		A3LUV9              	100.00%
Bootstrap support for A8HQG9 as seed ortholog is 99%.
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #631. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:130

A8J6P3              	100.00%		A3GFE2              	100.00%
Bootstrap support for A8J6P3 as seed ortholog is 99%.
Bootstrap support for A3GFE2 as seed ortholog is 99%.

Group of orthologs #632. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 S.stipitis:144

A8J0P9              	100.00%		A3LZ35              	100.00%
Bootstrap support for A8J0P9 as seed ortholog is 92%.
Bootstrap support for A3LZ35 as seed ortholog is 100%.

Group of orthologs #633. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 S.stipitis:119

A8JAW4              	100.00%		A3LWC5              	100.00%
Bootstrap support for A8JAW4 as seed ortholog is 100%.
Bootstrap support for A3LWC5 as seed ortholog is 99%.

Group of orthologs #634. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:212

A8JAX1              	100.00%		A3GFH2              	100.00%
                    	       		A3M0N6              	36.47%
Bootstrap support for A8JAX1 as seed ortholog is 96%.
Bootstrap support for A3GFH2 as seed ortholog is 100%.

Group of orthologs #635. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 S.stipitis:19

A8I6J1              	100.00%		A3LXL6              	100.00%
Bootstrap support for A8I6J1 as seed ortholog is 94%.
Bootstrap support for A3LXL6 as seed ortholog is 70%.
Alternative seed ortholog is A3LVI4 (19 bits away from this cluster)

Group of orthologs #636. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 S.stipitis:93

A8J0B6              	100.00%		P31867              	100.00%
Bootstrap support for A8J0B6 as seed ortholog is 88%.
Bootstrap support for P31867 as seed ortholog is 99%.

Group of orthologs #637. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 S.stipitis:211

A8IKB7              	100.00%		A3GFD5              	100.00%
Bootstrap support for A8IKB7 as seed ortholog is 100%.
Bootstrap support for A3GFD5 as seed ortholog is 100%.

Group of orthologs #638. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 S.stipitis:211

A8J7Y2              	100.00%		A3LQF9              	100.00%
Bootstrap support for A8J7Y2 as seed ortholog is 100%.
Bootstrap support for A3LQF9 as seed ortholog is 100%.

Group of orthologs #639. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 S.stipitis:211

A8J7U7              	100.00%		A3LYF2              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for A3LYF2 as seed ortholog is 100%.

Group of orthologs #640. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 S.stipitis:164

A8HYK4              	100.00%		A3GFN3              	100.00%
Bootstrap support for A8HYK4 as seed ortholog is 99%.
Bootstrap support for A3GFN3 as seed ortholog is 99%.

Group of orthologs #641. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 S.stipitis:210

A8J6I6              	100.00%		A3LRW1              	100.00%
Bootstrap support for A8J6I6 as seed ortholog is 100%.
Bootstrap support for A3LRW1 as seed ortholog is 100%.

Group of orthologs #642. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 S.stipitis:209

A8J7L1              	100.00%		A3LWZ3              	100.00%
Bootstrap support for A8J7L1 as seed ortholog is 100%.
Bootstrap support for A3LWZ3 as seed ortholog is 100%.

Group of orthologs #643. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 S.stipitis:209

O48949              	100.00%		A3LSL2              	100.00%
Bootstrap support for O48949 as seed ortholog is 100%.
Bootstrap support for A3LSL2 as seed ortholog is 100%.

Group of orthologs #644. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 S.stipitis:208

O65000              	100.00%		Q9P414              	100.00%
Q9FE26              	33.91%		
Bootstrap support for O65000 as seed ortholog is 100%.
Bootstrap support for Q9P414 as seed ortholog is 100%.

Group of orthologs #645. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:99

A8IDP6              	100.00%		A3GH66              	100.00%
Bootstrap support for A8IDP6 as seed ortholog is 99%.
Bootstrap support for A3GH66 as seed ortholog is 100%.

Group of orthologs #646. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 S.stipitis:208

A8IFS3              	100.00%		A3LR29              	100.00%
Bootstrap support for A8IFS3 as seed ortholog is 100%.
Bootstrap support for A3LR29 as seed ortholog is 100%.

Group of orthologs #647. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 S.stipitis:208

A8JCM5              	100.00%		A3M001              	100.00%
Bootstrap support for A8JCM5 as seed ortholog is 100%.
Bootstrap support for A3M001 as seed ortholog is 100%.

Group of orthologs #648. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:134

A8HM62              	100.00%		A3GGB1              	100.00%
                    	       		A3GGB2              	52.53%
Bootstrap support for A8HM62 as seed ortholog is 99%.
Bootstrap support for A3GGB1 as seed ortholog is 100%.

Group of orthologs #649. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 S.stipitis:207

A8IRX1              	100.00%		A3LNP5              	100.00%
Bootstrap support for A8IRX1 as seed ortholog is 84%.
Bootstrap support for A3LNP5 as seed ortholog is 100%.

Group of orthologs #650. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:59

A8IVQ7              	100.00%		A3LPX0              	100.00%
Bootstrap support for A8IVQ7 as seed ortholog is 89%.
Bootstrap support for A3LPX0 as seed ortholog is 98%.

Group of orthologs #651. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 S.stipitis:207

A8IGJ8              	100.00%		A3LYE8              	100.00%
Bootstrap support for A8IGJ8 as seed ortholog is 100%.
Bootstrap support for A3LYE8 as seed ortholog is 100%.

Group of orthologs #652. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 S.stipitis:207

A8JA68              	100.00%		A3LWH5              	100.00%
Bootstrap support for A8JA68 as seed ortholog is 100%.
Bootstrap support for A3LWH5 as seed ortholog is 100%.

Group of orthologs #653. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 S.stipitis:149

A8J8S6              	100.00%		A3GGZ4              	100.00%
Bootstrap support for A8J8S6 as seed ortholog is 99%.
Bootstrap support for A3GGZ4 as seed ortholog is 99%.

Group of orthologs #654. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 S.stipitis:91

A8HVL0              	100.00%		A3LQ03              	100.00%
Bootstrap support for A8HVL0 as seed ortholog is 100%.
Bootstrap support for A3LQ03 as seed ortholog is 96%.

Group of orthologs #655. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 S.stipitis:204

A8HSU7              	100.00%		A3LX39              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for A3LX39 as seed ortholog is 100%.

Group of orthologs #656. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 S.stipitis:203

A8J166              	100.00%		A3LYG9              	100.00%
                    	       		A3LNV9              	82.03%
                    	       		A3LRH0              	10.46%
Bootstrap support for A8J166 as seed ortholog is 100%.
Bootstrap support for A3LYG9 as seed ortholog is 100%.

Group of orthologs #657. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 S.stipitis:46

A8J6J0              	100.00%		A3GGG6              	100.00%
Bootstrap support for A8J6J0 as seed ortholog is 100%.
Bootstrap support for A3GGG6 as seed ortholog is 80%.

Group of orthologs #658. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 S.stipitis:99

A8ITM4              	100.00%		A3LWP2              	100.00%
Bootstrap support for A8ITM4 as seed ortholog is 100%.
Bootstrap support for A3LWP2 as seed ortholog is 99%.

Group of orthologs #659. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:203

A8JFB1              	100.00%		A3LW77              	100.00%
Bootstrap support for A8JFB1 as seed ortholog is 99%.
Bootstrap support for A3LW77 as seed ortholog is 100%.

Group of orthologs #660. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:61

Q66YD3              	100.00%		A3LVB6              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 99%.
Bootstrap support for A3LVB6 as seed ortholog is 90%.

Group of orthologs #661. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:37

A8JBH9              	100.00%		A3LRU9              	100.00%
                    	       		A3LSD4              	50.00%
                    	       		A3LZK0              	21.63%
Bootstrap support for A8JBH9 as seed ortholog is 92%.
Bootstrap support for A3LRU9 as seed ortholog is 82%.

Group of orthologs #662. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:149

A8IR43              	100.00%		A3LQ86              	100.00%
Bootstrap support for A8IR43 as seed ortholog is 99%.
Bootstrap support for A3LQ86 as seed ortholog is 99%.

Group of orthologs #663. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 S.stipitis:202

A8J387              	100.00%		A3GFH1              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for A3GFH1 as seed ortholog is 100%.

Group of orthologs #664. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 S.stipitis:202

A8IZH0              	100.00%		A3LNR7              	100.00%
Bootstrap support for A8IZH0 as seed ortholog is 100%.
Bootstrap support for A3LNR7 as seed ortholog is 100%.

Group of orthologs #665. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 S.stipitis:201

A8HTX3              	100.00%		A3LYA3              	100.00%
Bootstrap support for A8HTX3 as seed ortholog is 99%.
Bootstrap support for A3LYA3 as seed ortholog is 100%.

Group of orthologs #666. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 S.stipitis:201

A8I465              	100.00%		A3LUZ0              	100.00%
Bootstrap support for A8I465 as seed ortholog is 100%.
Bootstrap support for A3LUZ0 as seed ortholog is 100%.

Group of orthologs #667. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 S.stipitis:201

A8IWT5              	100.00%		A3LU49              	100.00%
Bootstrap support for A8IWT5 as seed ortholog is 100%.
Bootstrap support for A3LU49 as seed ortholog is 100%.

Group of orthologs #668. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 S.stipitis:127

A8JAL7              	100.00%		A3LS53              	100.00%
Bootstrap support for A8JAL7 as seed ortholog is 100%.
Bootstrap support for A3LS53 as seed ortholog is 99%.

Group of orthologs #669. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 S.stipitis:201

A8JE07              	100.00%		A3LQJ0              	100.00%
Bootstrap support for A8JE07 as seed ortholog is 100%.
Bootstrap support for A3LQJ0 as seed ortholog is 100%.

Group of orthologs #670. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 S.stipitis:200

A8HYM2              	100.00%		A3LVS9              	100.00%
Bootstrap support for A8HYM2 as seed ortholog is 100%.
Bootstrap support for A3LVS9 as seed ortholog is 100%.

Group of orthologs #671. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 S.stipitis:124

A8J588              	100.00%		A3GHV8              	100.00%
Bootstrap support for A8J588 as seed ortholog is 100%.
Bootstrap support for A3GHV8 as seed ortholog is 100%.

Group of orthologs #672. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 S.stipitis:200

A8JHC3              	100.00%		A3LR50              	100.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for A3LR50 as seed ortholog is 100%.

Group of orthologs #673. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 S.stipitis:200

Q6V9B3              	100.00%		A3LMX0              	100.00%
Bootstrap support for Q6V9B3 as seed ortholog is 100%.
Bootstrap support for A3LMX0 as seed ortholog is 100%.

Group of orthologs #674. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 S.stipitis:199

A8HSS0              	100.00%		A3GFY2              	100.00%
                    	       		A3GF02              	40.52%
Bootstrap support for A8HSS0 as seed ortholog is 100%.
Bootstrap support for A3GFY2 as seed ortholog is 100%.

Group of orthologs #675. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:199

A8HNG4              	100.00%		A3GGN4              	100.00%
Bootstrap support for A8HNG4 as seed ortholog is 99%.
Bootstrap support for A3GGN4 as seed ortholog is 100%.

Group of orthologs #676. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 S.stipitis:199

A8HVP2              	100.00%		A3LWF6              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 100%.
Bootstrap support for A3LWF6 as seed ortholog is 100%.

Group of orthologs #677. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:199

A8I5H6              	100.00%		A3LUJ2              	100.00%
Bootstrap support for A8I5H6 as seed ortholog is 99%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #678. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 S.stipitis:199

A8IN82              	100.00%		A3LRV8              	100.00%
Bootstrap support for A8IN82 as seed ortholog is 100%.
Bootstrap support for A3LRV8 as seed ortholog is 100%.

Group of orthologs #679. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 S.stipitis:198

A8I2T0              	100.00%		A3LQV9              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for A3LQV9 as seed ortholog is 100%.

Group of orthologs #680. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 S.stipitis:52

A8I3T3              	100.00%		A3LTH0              	100.00%
Bootstrap support for A8I3T3 as seed ortholog is 100%.
Bootstrap support for A3LTH0 as seed ortholog is 96%.

Group of orthologs #681. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 S.stipitis:198

A8IKZ2              	100.00%		A3LZT9              	100.00%
Bootstrap support for A8IKZ2 as seed ortholog is 100%.
Bootstrap support for A3LZT9 as seed ortholog is 100%.

Group of orthologs #682. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 S.stipitis:137

A8J6L8              	100.00%		A3GI66              	100.00%
Bootstrap support for A8J6L8 as seed ortholog is 100%.
Bootstrap support for A3GI66 as seed ortholog is 99%.

Group of orthologs #683. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:117

A8J6H8              	100.00%		A3LZ87              	100.00%
Bootstrap support for A8J6H8 as seed ortholog is 98%.
Bootstrap support for A3LZ87 as seed ortholog is 99%.

Group of orthologs #684. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 S.stipitis:198

A8JE06              	100.00%		A3LWX2              	100.00%
Bootstrap support for A8JE06 as seed ortholog is 100%.
Bootstrap support for A3LWX2 as seed ortholog is 100%.

Group of orthologs #685. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 S.stipitis:23

O22448              	100.00%		A3LUW2              	100.00%
Bootstrap support for O22448 as seed ortholog is 91%.
Bootstrap support for A3LUW2 as seed ortholog is 83%.

Group of orthologs #686. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 S.stipitis:198

A8JGE8              	100.00%		A3LZT5              	100.00%
Bootstrap support for A8JGE8 as seed ortholog is 100%.
Bootstrap support for A3LZT5 as seed ortholog is 100%.

Group of orthologs #687. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 S.stipitis:197

A8JGU7              	100.00%		A3M060              	100.00%
                    	       		A3LYV2              	10.77%
Bootstrap support for A8JGU7 as seed ortholog is 100%.
Bootstrap support for A3M060 as seed ortholog is 100%.

Group of orthologs #688. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:197

A8I893              	100.00%		A3LR65              	100.00%
Bootstrap support for A8I893 as seed ortholog is 99%.
Bootstrap support for A3LR65 as seed ortholog is 100%.

Group of orthologs #689. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:197

A8IS72              	100.00%		A3LNS4              	100.00%
Bootstrap support for A8IS72 as seed ortholog is 98%.
Bootstrap support for A3LNS4 as seed ortholog is 100%.

Group of orthologs #690. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 S.stipitis:24

A8IJQ1              	100.00%		A3LSI3              	100.00%
Bootstrap support for A8IJQ1 as seed ortholog is 100%.
Bootstrap support for A3LSI3 as seed ortholog is 77%.

Group of orthologs #691. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 S.stipitis:197

A8JAV5              	100.00%		A3LV88              	100.00%
Bootstrap support for A8JAV5 as seed ortholog is 100%.
Bootstrap support for A3LV88 as seed ortholog is 100%.

Group of orthologs #692. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 S.stipitis:197

A8J9U3              	100.00%		A3LZE7              	100.00%
Bootstrap support for A8J9U3 as seed ortholog is 99%.
Bootstrap support for A3LZE7 as seed ortholog is 100%.

Group of orthologs #693. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:84

A8JGY3              	100.00%		A3LV51              	100.00%
Bootstrap support for A8JGY3 as seed ortholog is 99%.
Bootstrap support for A3LV51 as seed ortholog is 99%.

Group of orthologs #694. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 S.stipitis:196

A8HN61              	100.00%		A3LPW9              	100.00%
Bootstrap support for A8HN61 as seed ortholog is 100%.
Bootstrap support for A3LPW9 as seed ortholog is 100%.

Group of orthologs #695. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 S.stipitis:8

A8HXZ5              	100.00%		A3GHK3              	100.00%
Bootstrap support for A8HXZ5 as seed ortholog is 100%.
Bootstrap support for A3GHK3 as seed ortholog is 68%.
Alternative seed ortholog is A3LPC4 (8 bits away from this cluster)

Group of orthologs #696. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 S.stipitis:196

A8HMC0              	100.00%		A3LYN5              	100.00%
Bootstrap support for A8HMC0 as seed ortholog is 100%.
Bootstrap support for A3LYN5 as seed ortholog is 100%.

Group of orthologs #697. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 S.stipitis:196

A8J786              	100.00%		A3LSB3              	100.00%
Bootstrap support for A8J786 as seed ortholog is 100%.
Bootstrap support for A3LSB3 as seed ortholog is 100%.

Group of orthologs #698. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 S.stipitis:195

A8IVS6              	100.00%		A3GH80              	100.00%
Bootstrap support for A8IVS6 as seed ortholog is 100%.
Bootstrap support for A3GH80 as seed ortholog is 100%.

Group of orthologs #699. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 S.stipitis:195

A8JHY6              	100.00%		A3GH69              	100.00%
Bootstrap support for A8JHY6 as seed ortholog is 100%.
Bootstrap support for A3GH69 as seed ortholog is 100%.

Group of orthologs #700. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:139

A8JEV0              	100.00%		A3LPX6              	100.00%
Bootstrap support for A8JEV0 as seed ortholog is 99%.
Bootstrap support for A3LPX6 as seed ortholog is 100%.

Group of orthologs #701. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:195

A8JEL2              	100.00%		A3LVK6              	100.00%
Bootstrap support for A8JEL2 as seed ortholog is 99%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #702. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 S.stipitis:195

Q944M9              	100.00%		A3LPI0              	100.00%
Bootstrap support for Q944M9 as seed ortholog is 100%.
Bootstrap support for A3LPI0 as seed ortholog is 100%.

Group of orthologs #703. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 S.stipitis:194

A8ICF1              	100.00%		A3M014              	100.00%
                    	       		A3LRY0              	48.19%
Bootstrap support for A8ICF1 as seed ortholog is 100%.
Bootstrap support for A3M014 as seed ortholog is 100%.

Group of orthologs #704. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:194

A8J698              	100.00%		A3LSY7              	100.00%
                    	       		A3LZT0              	31.34%
Bootstrap support for A8J698 as seed ortholog is 82%.
Bootstrap support for A3LSY7 as seed ortholog is 100%.

Group of orthologs #705. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 S.stipitis:16

A8HPM0              	100.00%		A3LVM4              	100.00%
Bootstrap support for A8HPM0 as seed ortholog is 100%.
Bootstrap support for A3LVM4 as seed ortholog is 71%.
Alternative seed ortholog is A3LMY0 (16 bits away from this cluster)

Group of orthologs #706. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:63

A8HTR9              	100.00%		A3LZB8              	100.00%
Bootstrap support for A8HTR9 as seed ortholog is 99%.
Bootstrap support for A3LZB8 as seed ortholog is 98%.

Group of orthologs #707. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 S.stipitis:194

A8ISQ2              	100.00%		A3LTK4              	100.00%
Bootstrap support for A8ISQ2 as seed ortholog is 100%.
Bootstrap support for A3LTK4 as seed ortholog is 100%.

Group of orthologs #708. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 S.stipitis:194

A8JDP4              	100.00%		A3LZW4              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for A3LZW4 as seed ortholog is 100%.

Group of orthologs #709. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 S.stipitis:193

A8HVA3              	100.00%		A3LXD4              	100.00%
A8HSB0              	92.31%		
A8JJH1              	30.77%		
A8J9L9              	15.38%		
A8JIN9              	7.69%		
Bootstrap support for A8HVA3 as seed ortholog is 99%.
Bootstrap support for A3LXD4 as seed ortholog is 100%.

Group of orthologs #710. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 S.stipitis:193

Q948T5              	100.00%		A3LPM6              	100.00%
A8IG47              	21.86%		A3LSX4              	9.86%
A8HVX7              	7.14%		
Bootstrap support for Q948T5 as seed ortholog is 100%.
Bootstrap support for A3LPM6 as seed ortholog is 100%.

Group of orthologs #711. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:193

A8J6W6              	100.00%		A3GHK6              	100.00%
                    	       		A3LR12              	8.65%
Bootstrap support for A8J6W6 as seed ortholog is 67%.
Alternative seed ortholog is A8J1N2 (52 bits away from this cluster)
Bootstrap support for A3GHK6 as seed ortholog is 100%.

Group of orthologs #712. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 S.stipitis:193

A8IS24              	100.00%		A3GGT4              	100.00%
Bootstrap support for A8IS24 as seed ortholog is 100%.
Bootstrap support for A3GGT4 as seed ortholog is 100%.

Group of orthologs #713. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 S.stipitis:193

A8IL16              	100.00%		A3M052              	100.00%
Bootstrap support for A8IL16 as seed ortholog is 100%.
Bootstrap support for A3M052 as seed ortholog is 100%.

Group of orthologs #714. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 S.stipitis:193

A8J513              	100.00%		A3LS11              	100.00%
Bootstrap support for A8J513 as seed ortholog is 100%.
Bootstrap support for A3LS11 as seed ortholog is 100%.

Group of orthologs #715. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 S.stipitis:193

A8J9D4              	100.00%		A3LR09              	100.00%
Bootstrap support for A8J9D4 as seed ortholog is 100%.
Bootstrap support for A3LR09 as seed ortholog is 100%.

Group of orthologs #716. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:50

A8JEQ5              	100.00%		A3LU34              	100.00%
Bootstrap support for A8JEQ5 as seed ortholog is 94%.
Bootstrap support for A3LU34 as seed ortholog is 89%.

Group of orthologs #717. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 S.stipitis:192

A8J9H8              	100.00%		A3LVN3              	100.00%
A8JH12              	20.69%		
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #718. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 S.stipitis:192

A8HP11              	100.00%		A3GF11              	100.00%
Bootstrap support for A8HP11 as seed ortholog is 100%.
Bootstrap support for A3GF11 as seed ortholog is 100%.

Group of orthologs #719. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:192

A8ICL5              	100.00%		A3LXR8              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 99%.
Bootstrap support for A3LXR8 as seed ortholog is 100%.

Group of orthologs #720. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 S.stipitis:191

A8J1X5              	100.00%		A3LNY2              	100.00%
A8IVY4              	10.97%		
Bootstrap support for A8J1X5 as seed ortholog is 100%.
Bootstrap support for A3LNY2 as seed ortholog is 100%.

Group of orthologs #721. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 S.stipitis:32

A8IB90              	100.00%		A3LQ02              	100.00%
Bootstrap support for A8IB90 as seed ortholog is 100%.
Bootstrap support for A3LQ02 as seed ortholog is 82%.

Group of orthologs #722. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 S.stipitis:190

A8JG03              	100.00%		A3GH13              	100.00%
Bootstrap support for A8JG03 as seed ortholog is 100%.
Bootstrap support for A3GH13 as seed ortholog is 100%.

Group of orthologs #723. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:77

A8JBM6              	100.00%		A3LTX0              	100.00%
Bootstrap support for A8JBM6 as seed ortholog is 99%.
Bootstrap support for A3LTX0 as seed ortholog is 97%.

Group of orthologs #724. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 S.stipitis:68

A8IT08              	100.00%		A3LWZ7              	100.00%
O24451              	95.04%		A3LRW8              	7.11%
Bootstrap support for A8IT08 as seed ortholog is 79%.
Bootstrap support for A3LWZ7 as seed ortholog is 97%.

Group of orthologs #725. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:189

A8HYT0              	100.00%		A3LYI7              	100.00%
Bootstrap support for A8HYT0 as seed ortholog is 94%.
Bootstrap support for A3LYI7 as seed ortholog is 100%.

Group of orthologs #726. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 S.stipitis:189

A8JCR0              	100.00%		A3M0J0              	100.00%
Bootstrap support for A8JCR0 as seed ortholog is 100%.
Bootstrap support for A3M0J0 as seed ortholog is 100%.

Group of orthologs #727. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:188

A8I0V1              	100.00%		A3GF89              	100.00%
Bootstrap support for A8I0V1 as seed ortholog is 78%.
Bootstrap support for A3GF89 as seed ortholog is 100%.

Group of orthologs #728. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 S.stipitis:188

A8IB34              	100.00%		A3LWH2              	100.00%
Bootstrap support for A8IB34 as seed ortholog is 100%.
Bootstrap support for A3LWH2 as seed ortholog is 100%.

Group of orthologs #729. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 S.stipitis:74

A8J274              	100.00%		A3LNJ1              	100.00%
Bootstrap support for A8J274 as seed ortholog is 88%.
Bootstrap support for A3LNJ1 as seed ortholog is 99%.

Group of orthologs #730. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:108

A8J435              	100.00%		A3LV62              	100.00%
Bootstrap support for A8J435 as seed ortholog is 96%.
Bootstrap support for A3LV62 as seed ortholog is 99%.

Group of orthologs #731. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 S.stipitis:188

A8J3Q6              	100.00%		A3LZE9              	100.00%
Bootstrap support for A8J3Q6 as seed ortholog is 100%.
Bootstrap support for A3LZE9 as seed ortholog is 100%.

Group of orthologs #732. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:186

Q42680              	100.00%		A3LXE7              	100.00%
A8HSB5              	92.54%		
A8IR81              	91.04%		
A8HWF6              	86.57%		
A8HWM8              	83.58%		
A8JJE0              	65.67%		
Bootstrap support for Q42680 as seed ortholog is 100%.
Bootstrap support for A3LXE7 as seed ortholog is 100%.

Group of orthologs #733. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 S.stipitis:186

A8I3R2              	100.00%		A3LRU3              	100.00%
A8J9L2              	11.40%		
Bootstrap support for A8I3R2 as seed ortholog is 100%.
Bootstrap support for A3LRU3 as seed ortholog is 100%.

Group of orthologs #734. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 S.stipitis:186

A8HP30              	100.00%		A3GHZ0              	100.00%
Bootstrap support for A8HP30 as seed ortholog is 100%.
Bootstrap support for A3GHZ0 as seed ortholog is 100%.

Group of orthologs #735. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 S.stipitis:186

A8I980              	100.00%		A3LN97              	100.00%
Bootstrap support for A8I980 as seed ortholog is 100%.
Bootstrap support for A3LN97 as seed ortholog is 100%.

Group of orthologs #736. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 S.stipitis:186

A8IT69              	100.00%		A3GFF9              	100.00%
Bootstrap support for A8IT69 as seed ortholog is 100%.
Bootstrap support for A3GFF9 as seed ortholog is 100%.

Group of orthologs #737. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:186

A8IT87              	100.00%		A3GI13              	100.00%
Bootstrap support for A8IT87 as seed ortholog is 99%.
Bootstrap support for A3GI13 as seed ortholog is 100%.

Group of orthologs #738. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 S.stipitis:186

A8JF38              	100.00%		A3GGJ6              	100.00%
Bootstrap support for A8JF38 as seed ortholog is 100%.
Bootstrap support for A3GGJ6 as seed ortholog is 100%.

Group of orthologs #739. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 S.stipitis:128

A8JDZ2              	100.00%		A3LUI8              	100.00%
Bootstrap support for A8JDZ2 as seed ortholog is 99%.
Bootstrap support for A3LUI8 as seed ortholog is 99%.

Group of orthologs #740. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 S.stipitis:185

A8HT40              	100.00%		A3LQX1              	100.00%
Bootstrap support for A8HT40 as seed ortholog is 100%.
Bootstrap support for A3LQX1 as seed ortholog is 100%.

Group of orthologs #741. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 S.stipitis:185

A8I0B0              	100.00%		A3LTI0              	100.00%
Bootstrap support for A8I0B0 as seed ortholog is 100%.
Bootstrap support for A3LTI0 as seed ortholog is 100%.

Group of orthologs #742. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 S.stipitis:185

A8IYQ8              	100.00%		A3LYU5              	100.00%
Bootstrap support for A8IYQ8 as seed ortholog is 100%.
Bootstrap support for A3LYU5 as seed ortholog is 100%.

Group of orthologs #743. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 S.stipitis:185

A8JCZ5              	100.00%		A3LNK3              	100.00%
Bootstrap support for A8JCZ5 as seed ortholog is 100%.
Bootstrap support for A3LNK3 as seed ortholog is 100%.

Group of orthologs #744. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 S.stipitis:185

A8JCS3              	100.00%		A3LTA7              	100.00%
Bootstrap support for A8JCS3 as seed ortholog is 100%.
Bootstrap support for A3LTA7 as seed ortholog is 100%.

Group of orthologs #745. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 S.stipitis:184

A8IZD4              	100.00%		A3LXW8              	100.00%
Bootstrap support for A8IZD4 as seed ortholog is 100%.
Bootstrap support for A3LXW8 as seed ortholog is 100%.

Group of orthologs #746. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 S.stipitis:184

Q84JV7              	100.00%		A3LMY4              	100.00%
Bootstrap support for Q84JV7 as seed ortholog is 100%.
Bootstrap support for A3LMY4 as seed ortholog is 100%.

Group of orthologs #747. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 S.stipitis:183

Q8RUT6              	100.00%		A3LSR0              	100.00%
A8J1H0              	29.18%		A3LUG7              	23.41%
A8HSA2              	29.18%		A3LWZ8              	10.50%
A8IUV9              	22.51%		
A8JFV7              	21.75%		
A8JFM1              	12.90%		
Q6QBS6              	10.82%		
Q6QBS7              	8.96%		
Bootstrap support for Q8RUT6 as seed ortholog is 100%.
Bootstrap support for A3LSR0 as seed ortholog is 100%.

Group of orthologs #748. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 S.stipitis:26

A8I0G0              	100.00%		A3LYC9              	100.00%
Bootstrap support for A8I0G0 as seed ortholog is 100%.
Bootstrap support for A3LYC9 as seed ortholog is 64%.
Alternative seed ortholog is A3LX20 (26 bits away from this cluster)

Group of orthologs #749. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 S.stipitis:183

A8J3I4              	100.00%		A3LQC7              	100.00%
Bootstrap support for A8J3I4 as seed ortholog is 100%.
Bootstrap support for A3LQC7 as seed ortholog is 100%.

Group of orthologs #750. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 S.stipitis:183

A8JHA6              	100.00%		A3LU63              	100.00%
Bootstrap support for A8JHA6 as seed ortholog is 100%.
Bootstrap support for A3LU63 as seed ortholog is 100%.

Group of orthologs #751. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 S.stipitis:182

A8JGH3              	100.00%		A3LQ78              	100.00%
A8JGH0              	23.90%		A3LTU0              	26.19%
                    	       		A3LTM5              	8.16%
Bootstrap support for A8JGH3 as seed ortholog is 100%.
Bootstrap support for A3LQ78 as seed ortholog is 100%.

Group of orthologs #752. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 S.stipitis:182

A8HT69              	100.00%		A3LVM3              	100.00%
Bootstrap support for A8HT69 as seed ortholog is 100%.
Bootstrap support for A3LVM3 as seed ortholog is 100%.

Group of orthologs #753. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:131

A8IZG4              	100.00%		A3LVM1              	100.00%
Bootstrap support for A8IZG4 as seed ortholog is 99%.
Bootstrap support for A3LVM1 as seed ortholog is 99%.

Group of orthologs #754. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 S.stipitis:181

A8HS59              	100.00%		A3LU90              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for A3LU90 as seed ortholog is 100%.

Group of orthologs #755. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 S.stipitis:181

A8J7V0              	100.00%		A3LZY0              	100.00%
Bootstrap support for A8J7V0 as seed ortholog is 100%.
Bootstrap support for A3LZY0 as seed ortholog is 100%.

Group of orthologs #756. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:108

A8HM32              	100.00%		A3LNF3              	100.00%
                    	       		A3GHQ8              	6.64%
Bootstrap support for A8HM32 as seed ortholog is 99%.
Bootstrap support for A3LNF3 as seed ortholog is 99%.

Group of orthologs #757. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:60

A8IB95              	100.00%		A3LVP0              	100.00%
Bootstrap support for A8IB95 as seed ortholog is 94%.
Bootstrap support for A3LVP0 as seed ortholog is 89%.

Group of orthologs #758. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 S.stipitis:180

A8I8K9              	100.00%		A3LX03              	100.00%
Bootstrap support for A8I8K9 as seed ortholog is 100%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #759. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 S.stipitis:34

A8IXI7              	100.00%		A3LT62              	100.00%
Bootstrap support for A8IXI7 as seed ortholog is 89%.
Bootstrap support for A3LT62 as seed ortholog is 78%.

Group of orthologs #760. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 S.stipitis:180

A8JB85              	100.00%		A3GFU8              	100.00%
Bootstrap support for A8JB85 as seed ortholog is 100%.
Bootstrap support for A3GFU8 as seed ortholog is 100%.

Group of orthologs #761. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 S.stipitis:180

A8J0A1              	100.00%		A3LVL2              	100.00%
Bootstrap support for A8J0A1 as seed ortholog is 74%.
Alternative seed ortholog is A8IZB6 (17 bits away from this cluster)
Bootstrap support for A3LVL2 as seed ortholog is 100%.

Group of orthologs #762. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 S.stipitis:179

A8JEC6              	100.00%		A3LS12              	100.00%
                    	       		A3LPP7              	7.77%
Bootstrap support for A8JEC6 as seed ortholog is 77%.
Bootstrap support for A3LS12 as seed ortholog is 100%.

Group of orthologs #763. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 S.stipitis:179

A8HP90              	100.00%		A3LX65              	100.00%
Bootstrap support for A8HP90 as seed ortholog is 100%.
Bootstrap support for A3LX65 as seed ortholog is 100%.

Group of orthologs #764. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:179

A8I8J2              	100.00%		A3M0I4              	100.00%
Bootstrap support for A8I8J2 as seed ortholog is 99%.
Bootstrap support for A3M0I4 as seed ortholog is 100%.

Group of orthologs #765. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 S.stipitis:14

A8J6A0              	100.00%		A3LZ12              	100.00%
Bootstrap support for A8J6A0 as seed ortholog is 93%.
Bootstrap support for A3LZ12 as seed ortholog is 72%.
Alternative seed ortholog is A3GGS8 (14 bits away from this cluster)

Group of orthologs #766. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 S.stipitis:178

A8HPG3              	100.00%		A3LSB0              	100.00%
A8IHW0              	100.00%		A3GID3              	100.00%
A8HNF6              	13.22%		A3LX79              	28.86%
A8IIZ1              	12.40%		
Bootstrap support for A8HPG3 as seed ortholog is 66%.
Alternative seed ortholog is A8JD26 (23 bits away from this cluster)
Bootstrap support for A8IHW0 as seed ortholog is 63%.
Alternative seed ortholog is A8JD26 (23 bits away from this cluster)
Bootstrap support for A3LSB0 as seed ortholog is 100%.
Bootstrap support for A3GID3 as seed ortholog is 100%.

Group of orthologs #767. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:178

A8HPN6              	100.00%		A3GGL0              	100.00%
Bootstrap support for A8HPN6 as seed ortholog is 100%.
Bootstrap support for A3GGL0 as seed ortholog is 100%.

Group of orthologs #768. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:98

A8HN23              	100.00%		A3LRK3              	100.00%
Bootstrap support for A8HN23 as seed ortholog is 94%.
Bootstrap support for A3LRK3 as seed ortholog is 99%.

Group of orthologs #769. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:44

A8HYY7              	100.00%		A3LT45              	100.00%
Bootstrap support for A8HYY7 as seed ortholog is 90%.
Bootstrap support for A3LT45 as seed ortholog is 88%.

Group of orthologs #770. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:178

A8I2D8              	100.00%		A3LWQ7              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for A3LWQ7 as seed ortholog is 100%.

Group of orthologs #771. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:178

A8JAA8              	100.00%		A3LMT2              	100.00%
Bootstrap support for A8JAA8 as seed ortholog is 100%.
Bootstrap support for A3LMT2 as seed ortholog is 100%.

Group of orthologs #772. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:108

A8JES7              	100.00%		A3LNI6              	100.00%
Bootstrap support for A8JES7 as seed ortholog is 99%.
Bootstrap support for A3LNI6 as seed ortholog is 99%.

Group of orthologs #773. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:59

A8JAR8              	100.00%		A3LT08              	100.00%
Bootstrap support for A8JAR8 as seed ortholog is 100%.
Bootstrap support for A3LT08 as seed ortholog is 95%.

Group of orthologs #774. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 S.stipitis:178

A8J6T1              	100.00%		A3LX25              	100.00%
Bootstrap support for A8J6T1 as seed ortholog is 100%.
Bootstrap support for A3LX25 as seed ortholog is 100%.

Group of orthologs #775. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 S.stipitis:34

Q6V8K6              	100.00%		A3LNN2              	100.00%
Bootstrap support for Q6V8K6 as seed ortholog is 74%.
Alternative seed ortholog is A8I1Q9 (27 bits away from this cluster)
Bootstrap support for A3LNN2 as seed ortholog is 77%.

Group of orthologs #776. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 S.stipitis:48

A8IPQ9              	100.00%		A3LU79              	100.00%
A8I2U7              	31.77%		
A8IHF4              	26.12%		
A8JI59              	24.78%		
A8JD03              	21.24%		
A8HSJ3              	16.46%		
A8JD79              	10.81%		
A8HWT8              	8.61%		
A8I400              	8.23%		
A8IZ29              	7.27%		
A8J5F2              	6.41%		
Bootstrap support for A8IPQ9 as seed ortholog is 68%.
Alternative seed ortholog is A8I0R6 (15 bits away from this cluster)
Bootstrap support for A3LU79 as seed ortholog is 88%.

Group of orthologs #777. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 S.stipitis:40

Q8LP71              	100.00%		A3LTX9              	100.00%
Q8LP69              	72.77%		A3LVA4              	11.81%
A8ISD6              	72.57%		A3M010              	10.63%
A8ISD7              	72.57%		
Bootstrap support for Q8LP71 as seed ortholog is 100%.
Bootstrap support for A3LTX9 as seed ortholog is 79%.

Group of orthologs #778. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 S.stipitis:177

A8HYU2              	100.00%		A3LTT7              	100.00%
Bootstrap support for A8HYU2 as seed ortholog is 100%.
Bootstrap support for A3LTT7 as seed ortholog is 100%.

Group of orthologs #779. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 S.stipitis:177

A8IC90              	100.00%		A3LVX9              	100.00%
Bootstrap support for A8IC90 as seed ortholog is 100%.
Bootstrap support for A3LVX9 as seed ortholog is 100%.

Group of orthologs #780. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:177

A8ILJ9              	100.00%		A3LTD1              	100.00%
Bootstrap support for A8ILJ9 as seed ortholog is 99%.
Bootstrap support for A3LTD1 as seed ortholog is 100%.

Group of orthologs #781. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 S.stipitis:177

A8JGI9              	100.00%		A3LP14              	100.00%
Bootstrap support for A8JGI9 as seed ortholog is 100%.
Bootstrap support for A3LP14 as seed ortholog is 100%.

Group of orthologs #782. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:21

A8IX73              	100.00%		A3LY10              	100.00%
                    	       		A3GHU5              	23.42%
                    	       		A3LQQ5              	8.19%
                    	       		A3M0N3              	7.46%
                    	       		A3GHF2              	7.35%
                    	       		A3M0B9              	7.25%
                    	       		A3LZS0              	5.99%
                    	       		F2Z690              	5.57%
                    	       		A3GES9              	5.46%
                    	       		F2Z689              	5.46%
Bootstrap support for A8IX73 as seed ortholog is 100%.
Bootstrap support for A3LY10 as seed ortholog is 64%.
Alternative seed ortholog is A3LQV8 (21 bits away from this cluster)

Group of orthologs #783. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:176

Q8HTL2              	100.00%		A3LNH9              	100.00%
A8IU28              	6.43%		
Bootstrap support for Q8HTL2 as seed ortholog is 100%.
Bootstrap support for A3LNH9 as seed ortholog is 100%.

Group of orthologs #784. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:176

A8I4H4              	100.00%		A3LW99              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for A3LW99 as seed ortholog is 100%.

Group of orthologs #785. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:17

A8IQP6              	100.00%		A3LRM1              	100.00%
Bootstrap support for A8IQP6 as seed ortholog is 100%.
Bootstrap support for A3LRM1 as seed ortholog is 64%.
Alternative seed ortholog is A3LSY9 (17 bits away from this cluster)

Group of orthologs #786. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:176

A8IZA4              	100.00%		A3LR70              	100.00%
Bootstrap support for A8IZA4 as seed ortholog is 100%.
Bootstrap support for A3LR70 as seed ortholog is 100%.

Group of orthologs #787. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 S.stipitis:176

A8J212              	100.00%		A3LVA8              	100.00%
Bootstrap support for A8J212 as seed ortholog is 100%.
Bootstrap support for A3LVA8 as seed ortholog is 100%.

Group of orthologs #788. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 S.stipitis:175

A8I4E1              	100.00%		A3GGZ5              	100.00%
Bootstrap support for A8I4E1 as seed ortholog is 100%.
Bootstrap support for A3GGZ5 as seed ortholog is 100%.

Group of orthologs #789. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:24

A8IYA3              	100.00%		A3LS38              	100.00%
Bootstrap support for A8IYA3 as seed ortholog is 99%.
Bootstrap support for A3LS38 as seed ortholog is 84%.

Group of orthologs #790. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 S.stipitis:175

A8J304              	100.00%		A3LUN1              	100.00%
Bootstrap support for A8J304 as seed ortholog is 100%.
Bootstrap support for A3LUN1 as seed ortholog is 100%.

Group of orthologs #791. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:174

A8J1F3              	100.00%		A3LQH6              	100.00%
A8JGH4              	41.94%		A3GHH4              	24.38%
A8JGH2              	19.83%		
Bootstrap support for A8J1F3 as seed ortholog is 98%.
Bootstrap support for A3LQH6 as seed ortholog is 100%.

Group of orthologs #792. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 S.stipitis:174

A8HYD8              	100.00%		A3LVQ8              	100.00%
Bootstrap support for A8HYD8 as seed ortholog is 100%.
Bootstrap support for A3LVQ8 as seed ortholog is 100%.

Group of orthologs #793. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 S.stipitis:173

A8IR59              	100.00%		A3GGH3              	100.00%
Bootstrap support for A8IR59 as seed ortholog is 100%.
Bootstrap support for A3GGH3 as seed ortholog is 100%.

Group of orthologs #794. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 S.stipitis:173

A8I0F5              	100.00%		A3LX69              	100.00%
Bootstrap support for A8I0F5 as seed ortholog is 100%.
Bootstrap support for A3LX69 as seed ortholog is 100%.

Group of orthologs #795. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 S.stipitis:173

A8JAN2              	100.00%		A3LND3              	100.00%
Bootstrap support for A8JAN2 as seed ortholog is 100%.
Bootstrap support for A3LND3 as seed ortholog is 100%.

Group of orthologs #796. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 S.stipitis:18

A8IT81              	100.00%		A3LMV5              	100.00%
                    	       		A3LN16              	43.43%
                    	       		A3LRB5              	7.34%
Bootstrap support for A8IT81 as seed ortholog is 100%.
Bootstrap support for A3LMV5 as seed ortholog is 65%.
Alternative seed ortholog is A3GG09 (18 bits away from this cluster)

Group of orthologs #797. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:171

A8IQY2              	100.00%		A3LT52              	100.00%
                    	       		A3GI52              	13.62%
Bootstrap support for A8IQY2 as seed ortholog is 91%.
Bootstrap support for A3LT52 as seed ortholog is 100%.

Group of orthologs #798. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:171

A8I297              	100.00%		A3LV26              	100.00%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for A3LV26 as seed ortholog is 100%.

Group of orthologs #799. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:171

A8IWU0              	100.00%		A3GG37              	100.00%
Bootstrap support for A8IWU0 as seed ortholog is 100%.
Bootstrap support for A3GG37 as seed ortholog is 100%.

Group of orthologs #800. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:171

A8I5B9              	100.00%		A3LYA6              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for A3LYA6 as seed ortholog is 100%.

Group of orthologs #801. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:171

A8J3C7              	100.00%		A3LS30              	100.00%
Bootstrap support for A8J3C7 as seed ortholog is 100%.
Bootstrap support for A3LS30 as seed ortholog is 100%.

Group of orthologs #802. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:94

A8IZV8              	100.00%		A3M047              	100.00%
Bootstrap support for A8IZV8 as seed ortholog is 99%.
Bootstrap support for A3M047 as seed ortholog is 100%.

Group of orthologs #803. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:171

Q6V506              	100.00%		A3LP06              	100.00%
Bootstrap support for Q6V506 as seed ortholog is 100%.
Bootstrap support for A3LP06 as seed ortholog is 100%.

Group of orthologs #804. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 S.stipitis:171

Q9ATG8              	100.00%		A3LYF6              	100.00%
Bootstrap support for Q9ATG8 as seed ortholog is 100%.
Bootstrap support for A3LYF6 as seed ortholog is 100%.

Group of orthologs #805. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:170

A8IR69              	100.00%		A3LZZ1              	100.00%
A8JDC0              	100.00%		A3LXE6              	97.56%
A8JDC9              	100.00%		
A8JDE1              	98.43%		
A8HV98              	97.66%		
A8JDH1              	97.64%		
A8HWX1              	96.88%		
A8IJS4              	96.85%		
A8HWE3              	96.09%		
A8HWX5              	96.09%		
A8JIN6              	96.09%		
A8IR79              	96.06%		
A8IJR6              	92.13%		
A8JJQ6              	90.55%		
A8HSB2              	85.83%		
A8JJS0              	79.69%		
A8IW84              	60.94%		
A8IW75              	60.94%		
A8JJV5              	25.78%		
A8JJN6              	21.26%		
A8JCT1              	7.03%		
Bootstrap support for A8IR69 as seed ortholog is 99%.
Bootstrap support for A8JDC0 as seed ortholog is 99%.
Bootstrap support for A8JDC9 as seed ortholog is 99%.
Bootstrap support for A3LZZ1 as seed ortholog is 100%.

Group of orthologs #806. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:71

A8J3X0              	100.00%		A3LYL3              	100.00%
A8IL00              	13.43%		
A8J8C9              	11.27%		
A8IYL6              	11.27%		
Bootstrap support for A8J3X0 as seed ortholog is 94%.
Bootstrap support for A3LYL3 as seed ortholog is 95%.

Group of orthologs #807. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 S.stipitis:103

A8JER8              	100.00%		A3LN44              	100.00%
                    	       		A3LPH1              	7.87%
Bootstrap support for A8JER8 as seed ortholog is 100%.
Bootstrap support for A3LN44 as seed ortholog is 99%.

Group of orthologs #808. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 S.stipitis:170

A8II11              	100.00%		A3LS89              	100.00%
Bootstrap support for A8II11 as seed ortholog is 100%.
Bootstrap support for A3LS89 as seed ortholog is 100%.

Group of orthologs #809. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 S.stipitis:170

A8HXG8              	100.00%		A3LZS2              	100.00%
Bootstrap support for A8HXG8 as seed ortholog is 100%.
Bootstrap support for A3LZS2 as seed ortholog is 100%.

Group of orthologs #810. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 S.stipitis:169

A8HYQ9              	100.00%		A3GG10              	100.00%
Bootstrap support for A8HYQ9 as seed ortholog is 100%.
Bootstrap support for A3GG10 as seed ortholog is 100%.

Group of orthologs #811. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 S.stipitis:169

A8HPE7              	100.00%		A3LVI6              	100.00%
Bootstrap support for A8HPE7 as seed ortholog is 100%.
Bootstrap support for A3LVI6 as seed ortholog is 100%.

Group of orthologs #812. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 S.stipitis:169

A8J493              	100.00%		A3GHH8              	100.00%
Bootstrap support for A8J493 as seed ortholog is 100%.
Bootstrap support for A3GHH8 as seed ortholog is 100%.

Group of orthologs #813. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:169

A8JFF7              	100.00%		A3LU96              	100.00%
Bootstrap support for A8JFF7 as seed ortholog is 97%.
Bootstrap support for A3LU96 as seed ortholog is 100%.

Group of orthologs #814. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:168

A8IGR4              	100.00%		A3GGP2              	100.00%
Bootstrap support for A8IGR4 as seed ortholog is 100%.
Bootstrap support for A3GGP2 as seed ortholog is 100%.

Group of orthologs #815. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:71

A8IIQ2              	100.00%		A3LTV4              	100.00%
Bootstrap support for A8IIQ2 as seed ortholog is 95%.
Bootstrap support for A3LTV4 as seed ortholog is 93%.

Group of orthologs #816. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:168

A8J1L5              	100.00%		A3LP82              	100.00%
Bootstrap support for A8J1L5 as seed ortholog is 100%.
Bootstrap support for A3LP82 as seed ortholog is 100%.

Group of orthologs #817. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:43

A8IWB0              	100.00%		A3LU67              	100.00%
Bootstrap support for A8IWB0 as seed ortholog is 100%.
Bootstrap support for A3LU67 as seed ortholog is 90%.

Group of orthologs #818. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:168

A8IP78              	100.00%		A3LZB0              	100.00%
Bootstrap support for A8IP78 as seed ortholog is 100%.
Bootstrap support for A3LZB0 as seed ortholog is 100%.

Group of orthologs #819. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:168

A8J888              	100.00%		A3LVM5              	100.00%
Bootstrap support for A8J888 as seed ortholog is 100%.
Bootstrap support for A3LVM5 as seed ortholog is 100%.

Group of orthologs #820. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 S.stipitis:168

A8JFC3              	100.00%		A3LS34              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for A3LS34 as seed ortholog is 100%.

Group of orthologs #821. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 S.stipitis:167

A8JH17              	100.00%		A3GGN0              	100.00%
A8HQL6              	9.63%		
Bootstrap support for A8JH17 as seed ortholog is 75%.
Bootstrap support for A3GGN0 as seed ortholog is 100%.

Group of orthologs #822. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 S.stipitis:167

A8I4H7              	100.00%		A3LUN3              	100.00%
Bootstrap support for A8I4H7 as seed ortholog is 100%.
Bootstrap support for A3LUN3 as seed ortholog is 100%.

Group of orthologs #823. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 S.stipitis:167

A8IQQ5              	100.00%		A3LNC2              	100.00%
Bootstrap support for A8IQQ5 as seed ortholog is 100%.
Bootstrap support for A3LNC2 as seed ortholog is 100%.

Group of orthologs #824. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 S.stipitis:167

A8JEN9              	100.00%		A3LND1              	100.00%
Bootstrap support for A8JEN9 as seed ortholog is 100%.
Bootstrap support for A3LND1 as seed ortholog is 100%.

Group of orthologs #825. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 S.stipitis:166

A8J101              	100.00%		A3LZE3              	100.00%
A8J5F0              	35.21%		
A8IHZ3              	18.05%		
A8JIH7              	10.36%		
Bootstrap support for A8J101 as seed ortholog is 82%.
Bootstrap support for A3LZE3 as seed ortholog is 100%.

Group of orthologs #826. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 S.stipitis:166

A8HQI5              	100.00%		A3LU40              	100.00%
Bootstrap support for A8HQI5 as seed ortholog is 100%.
Bootstrap support for A3LU40 as seed ortholog is 100%.

Group of orthologs #827. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 S.stipitis:166

A8IW48              	100.00%		A3LN33              	100.00%
Bootstrap support for A8IW48 as seed ortholog is 100%.
Bootstrap support for A3LN33 as seed ortholog is 100%.

Group of orthologs #828. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 S.stipitis:100

A8IRS5              	100.00%		A3LZ09              	100.00%
Bootstrap support for A8IRS5 as seed ortholog is 100%.
Bootstrap support for A3LZ09 as seed ortholog is 99%.

Group of orthologs #829. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 S.stipitis:166

A8JFY9              	100.00%		A3LRL1              	100.00%
Bootstrap support for A8JFY9 as seed ortholog is 80%.
Bootstrap support for A3LRL1 as seed ortholog is 100%.

Group of orthologs #830. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:165

A8HQK6              	100.00%		A3LZE5              	100.00%
                    	       		A3LUT9              	42.34%
Bootstrap support for A8HQK6 as seed ortholog is 88%.
Bootstrap support for A3LZE5 as seed ortholog is 100%.

Group of orthologs #831. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:165

A8J951              	100.00%		A3LRQ7              	100.00%
                    	       		A3LVV1              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for A3LRQ7 as seed ortholog is 100%.
Bootstrap support for A3LVV1 as seed ortholog is 100%.

Group of orthologs #832. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:165

A8HN50              	100.00%		A3GGB0              	100.00%
Bootstrap support for A8HN50 as seed ortholog is 100%.
Bootstrap support for A3GGB0 as seed ortholog is 100%.

Group of orthologs #833. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:165

A8ISK2              	100.00%		A3GFG7              	100.00%
Bootstrap support for A8ISK2 as seed ortholog is 100%.
Bootstrap support for A3GFG7 as seed ortholog is 100%.

Group of orthologs #834. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:165

A8IAT4              	100.00%		A3LUW4              	100.00%
Bootstrap support for A8IAT4 as seed ortholog is 100%.
Bootstrap support for A3LUW4 as seed ortholog is 100%.

Group of orthologs #835. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:165

A8IVW9              	100.00%		A3LPD5              	100.00%
Bootstrap support for A8IVW9 as seed ortholog is 100%.
Bootstrap support for A3LPD5 as seed ortholog is 100%.

Group of orthologs #836. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 S.stipitis:114

A8JBD8              	100.00%		A3M0I2              	100.00%
Bootstrap support for A8JBD8 as seed ortholog is 100%.
Bootstrap support for A3M0I2 as seed ortholog is 99%.

Group of orthologs #837. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 S.stipitis:164

A8JFG1              	100.00%		A3LQD1              	100.00%
A8HTT9              	30.24%		
Bootstrap support for A8JFG1 as seed ortholog is 99%.
Bootstrap support for A3LQD1 as seed ortholog is 100%.

Group of orthologs #838. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 S.stipitis:164

A8JGD1              	100.00%		A3LS93              	100.00%
Q7XXT3              	33.92%		
Bootstrap support for A8JGD1 as seed ortholog is 100%.
Bootstrap support for A3LS93 as seed ortholog is 100%.

Group of orthologs #839. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 S.stipitis:164

A8ITA7              	100.00%		A3LQB9              	100.00%
Bootstrap support for A8ITA7 as seed ortholog is 100%.
Bootstrap support for A3LQB9 as seed ortholog is 100%.

Group of orthologs #840. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 S.stipitis:164

A8J1B8              	100.00%		A3LR74              	100.00%
Bootstrap support for A8J1B8 as seed ortholog is 100%.
Bootstrap support for A3LR74 as seed ortholog is 100%.

Group of orthologs #841. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 S.stipitis:164

A8J8Y6              	100.00%		A3LXK5              	100.00%
Bootstrap support for A8J8Y6 as seed ortholog is 100%.
Bootstrap support for A3LXK5 as seed ortholog is 100%.

Group of orthologs #842. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 S.stipitis:163

A8HXK0              	100.00%		A3LRX7              	100.00%
                    	       		A3GF42              	19.30%
Bootstrap support for A8HXK0 as seed ortholog is 100%.
Bootstrap support for A3LRX7 as seed ortholog is 100%.

Group of orthologs #843. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:163

A8I4A8              	100.00%		A3LXC4              	100.00%
Bootstrap support for A8I4A8 as seed ortholog is 99%.
Bootstrap support for A3LXC4 as seed ortholog is 100%.

Group of orthologs #844. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:163

A8J664              	100.00%		A3LS95              	100.00%
Bootstrap support for A8J664 as seed ortholog is 92%.
Bootstrap support for A3LS95 as seed ortholog is 100%.

Group of orthologs #845. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 S.stipitis:162

A8ISK5              	100.00%		A3GFI7              	100.00%
Bootstrap support for A8ISK5 as seed ortholog is 100%.
Bootstrap support for A3GFI7 as seed ortholog is 100%.

Group of orthologs #846. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 S.stipitis:162

A8ITP1              	100.00%		A3LY41              	100.00%
Bootstrap support for A8ITP1 as seed ortholog is 100%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #847. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 S.stipitis:162

A8J3D3              	100.00%		A3LSV4              	100.00%
Bootstrap support for A8J3D3 as seed ortholog is 100%.
Bootstrap support for A3LSV4 as seed ortholog is 100%.

Group of orthologs #848. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:162

A8IXQ0              	100.00%		A3LYR2              	100.00%
Bootstrap support for A8IXQ0 as seed ortholog is 64%.
Alternative seed ortholog is Q8VZZ0 (53 bits away from this cluster)
Bootstrap support for A3LYR2 as seed ortholog is 100%.

Group of orthologs #849. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 S.stipitis:162

A8J4E2              	100.00%		A3LZH1              	100.00%
Bootstrap support for A8J4E2 as seed ortholog is 100%.
Bootstrap support for A3LZH1 as seed ortholog is 100%.

Group of orthologs #850. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 S.stipitis:162

A8JH29              	100.00%		A3LSX2              	100.00%
Bootstrap support for A8JH29 as seed ortholog is 100%.
Bootstrap support for A3LSX2 as seed ortholog is 100%.

Group of orthologs #851. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 S.stipitis:161

A8I5J8              	100.00%		A3LNY1              	100.00%
A8I7X6              	27.35%		A3LVU4              	69.54%
Bootstrap support for A8I5J8 as seed ortholog is 100%.
Bootstrap support for A3LNY1 as seed ortholog is 100%.

Group of orthologs #852. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 S.stipitis:161

A8HP79              	100.00%		A3LWT3              	100.00%
Bootstrap support for A8HP79 as seed ortholog is 100%.
Bootstrap support for A3LWT3 as seed ortholog is 100%.

Group of orthologs #853. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 S.stipitis:161

A8ITU7              	100.00%		A3LPQ2              	100.00%
Bootstrap support for A8ITU7 as seed ortholog is 77%.
Bootstrap support for A3LPQ2 as seed ortholog is 100%.

Group of orthologs #854. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 S.stipitis:161

A8JGN6              	100.00%		A3LTN3              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for A3LTN3 as seed ortholog is 100%.

Group of orthologs #855. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 S.stipitis:32

A8IA03              	100.00%		A3LZN6              	100.00%
Q6UPR4              	21.61%		
Q6UPR1              	6.78%		
Bootstrap support for A8IA03 as seed ortholog is 99%.
Bootstrap support for A3LZN6 as seed ortholog is 81%.

Group of orthologs #856. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 S.stipitis:118

A8HRZ9              	100.00%		A3GHC1              	100.00%
Bootstrap support for A8HRZ9 as seed ortholog is 99%.
Bootstrap support for A3GHC1 as seed ortholog is 100%.

Group of orthologs #857. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 S.stipitis:160

A8IRR6              	100.00%		A3LVN0              	100.00%
Bootstrap support for A8IRR6 as seed ortholog is 100%.
Bootstrap support for A3LVN0 as seed ortholog is 100%.

Group of orthologs #858. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 S.stipitis:160

A8IU94              	100.00%		A3LU93              	100.00%
Bootstrap support for A8IU94 as seed ortholog is 100%.
Bootstrap support for A3LU93 as seed ortholog is 100%.

Group of orthologs #859. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 S.stipitis:160

A8ITV6              	100.00%		A3LVQ3              	100.00%
Bootstrap support for A8ITV6 as seed ortholog is 100%.
Bootstrap support for A3LVQ3 as seed ortholog is 100%.

Group of orthologs #860. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 S.stipitis:160

A8J7M2              	100.00%		A3LST6              	100.00%
Bootstrap support for A8J7M2 as seed ortholog is 100%.
Bootstrap support for A3LST6 as seed ortholog is 100%.

Group of orthologs #861. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:160

A8JDV9              	100.00%		A3M0G0              	100.00%
Bootstrap support for A8JDV9 as seed ortholog is 90%.
Bootstrap support for A3M0G0 as seed ortholog is 100%.

Group of orthologs #862. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:58

A8JH72              	100.00%		A3GGP3              	100.00%
A8J9H5              	9.77%		A3LRD4              	12.88%
Bootstrap support for A8JH72 as seed ortholog is 78%.
Bootstrap support for A3GGP3 as seed ortholog is 90%.

Group of orthologs #863. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 S.stipitis:159

A8I7Y8              	100.00%		A3GFC5              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for A3GFC5 as seed ortholog is 100%.

Group of orthologs #864. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 S.stipitis:159

A8IF01              	100.00%		A3GH77              	100.00%
Bootstrap support for A8IF01 as seed ortholog is 100%.
Bootstrap support for A3GH77 as seed ortholog is 100%.

Group of orthologs #865. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:76

A8J3X9              	100.00%		A3GI98              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 99%.
Bootstrap support for A3GI98 as seed ortholog is 98%.

Group of orthologs #866. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 S.stipitis:159

A8J805              	100.00%		A3GI06              	100.00%
Bootstrap support for A8J805 as seed ortholog is 100%.
Bootstrap support for A3GI06 as seed ortholog is 100%.

Group of orthologs #867. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 S.stipitis:159

A8J8S7              	100.00%		A3LUJ0              	100.00%
Bootstrap support for A8J8S7 as seed ortholog is 100%.
Bootstrap support for A3LUJ0 as seed ortholog is 100%.

Group of orthologs #868. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 S.stipitis:100

A8J4N7              	100.00%		A3LY26              	100.00%
Bootstrap support for A8J4N7 as seed ortholog is 94%.
Bootstrap support for A3LY26 as seed ortholog is 98%.

Group of orthologs #869. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 S.stipitis:159

A8J8J1              	100.00%		A3M097              	100.00%
Bootstrap support for A8J8J1 as seed ortholog is 100%.
Bootstrap support for A3M097 as seed ortholog is 100%.

Group of orthologs #870. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 S.stipitis:71

A8J0C2              	100.00%		A3LZY3              	100.00%
A8I8S8              	71.57%		A3LWB2              	10.42%
A8HV32              	20.03%		
Bootstrap support for A8J0C2 as seed ortholog is 100%.
Bootstrap support for A3LZY3 as seed ortholog is 89%.

Group of orthologs #871. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 S.stipitis:158

A8I4N9              	100.00%		A3LX85              	100.00%
Bootstrap support for A8I4N9 as seed ortholog is 100%.
Bootstrap support for A3LX85 as seed ortholog is 100%.

Group of orthologs #872. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 S.stipitis:158

A8IQD4              	100.00%		A3LSC6              	100.00%
Bootstrap support for A8IQD4 as seed ortholog is 100%.
Bootstrap support for A3LSC6 as seed ortholog is 100%.

Group of orthologs #873. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 S.stipitis:158

A8J1D0              	100.00%		A3LWI8              	100.00%
Bootstrap support for A8J1D0 as seed ortholog is 100%.
Bootstrap support for A3LWI8 as seed ortholog is 100%.

Group of orthologs #874. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 S.stipitis:157

A8J0T9              	100.00%		A3LUU6              	100.00%
A8ISJ2              	27.54%		
Bootstrap support for A8J0T9 as seed ortholog is 65%.
Alternative seed ortholog is A8J5G2 (26 bits away from this cluster)
Bootstrap support for A3LUU6 as seed ortholog is 100%.

Group of orthologs #875. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:156

A8JDZ5              	100.00%		A3LSM1              	100.00%
A8IUU0              	47.52%		
A8IS88              	19.66%		
A8JBI1              	18.13%		
A8HNJ4              	13.17%		
Bootstrap support for A8JDZ5 as seed ortholog is 92%.
Bootstrap support for A3LSM1 as seed ortholog is 100%.

Group of orthologs #876. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:32

A8HXK7              	100.00%		A3LVQ5              	100.00%
Bootstrap support for A8HXK7 as seed ortholog is 95%.
Bootstrap support for A3LVQ5 as seed ortholog is 83%.

Group of orthologs #877. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 S.stipitis:156

A8IM74              	100.00%		A3LQA4              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for A3LQA4 as seed ortholog is 100%.

Group of orthologs #878. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 S.stipitis:156

A8J7I3              	100.00%		A3LRK0              	100.00%
Bootstrap support for A8J7I3 as seed ortholog is 100%.
Bootstrap support for A3LRK0 as seed ortholog is 100%.

Group of orthologs #879. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:70

A8J3F7              	100.00%		A3LXQ4              	100.00%
Bootstrap support for A8J3F7 as seed ortholog is 99%.
Bootstrap support for A3LXQ4 as seed ortholog is 96%.

Group of orthologs #880. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:156

A8JEL6              	100.00%		A3LSR7              	100.00%
Bootstrap support for A8JEL6 as seed ortholog is 98%.
Bootstrap support for A3LSR7 as seed ortholog is 100%.

Group of orthologs #881. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 S.stipitis:155

A8IC58              	100.00%		A3LSE6              	100.00%
Bootstrap support for A8IC58 as seed ortholog is 100%.
Bootstrap support for A3LSE6 as seed ortholog is 100%.

Group of orthologs #882. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 S.stipitis:155

A8I320              	100.00%		A3LXM0              	100.00%
Bootstrap support for A8I320 as seed ortholog is 100%.
Bootstrap support for A3LXM0 as seed ortholog is 100%.

Group of orthologs #883. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 S.stipitis:155

A8J591              	100.00%		A3GG44              	100.00%
Bootstrap support for A8J591 as seed ortholog is 100%.
Bootstrap support for A3GG44 as seed ortholog is 100%.

Group of orthologs #884. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 S.stipitis:155

A8J7L7              	100.00%		A3LXH5              	100.00%
Bootstrap support for A8J7L7 as seed ortholog is 100%.
Bootstrap support for A3LXH5 as seed ortholog is 100%.

Group of orthologs #885. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:154

A8HX47              	100.00%		A3LQN4              	100.00%
                    	       		A3GHZ7              	9.69%
Bootstrap support for A8HX47 as seed ortholog is 94%.
Bootstrap support for A3LQN4 as seed ortholog is 100%.

Group of orthologs #886. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:73

A8I7J8              	100.00%		A3GHQ2              	100.00%
Bootstrap support for A8I7J8 as seed ortholog is 98%.
Bootstrap support for A3GHQ2 as seed ortholog is 99%.

Group of orthologs #887. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 S.stipitis:154

A8I4F6              	100.00%		Q9C1D4              	100.00%
Bootstrap support for A8I4F6 as seed ortholog is 100%.
Bootstrap support for Q9C1D4 as seed ortholog is 100%.

Group of orthologs #888. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 S.stipitis:154

A8I9S6              	100.00%		A3LZK6              	100.00%
Bootstrap support for A8I9S6 as seed ortholog is 100%.
Bootstrap support for A3LZK6 as seed ortholog is 100%.

Group of orthologs #889. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 S.stipitis:154

A8J2R7              	100.00%		A3LRP5              	100.00%
Bootstrap support for A8J2R7 as seed ortholog is 100%.
Bootstrap support for A3LRP5 as seed ortholog is 100%.

Group of orthologs #890. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 S.stipitis:154

A8JHZ6              	100.00%		A3LQ24              	100.00%
Bootstrap support for A8JHZ6 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #891. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:153

Q8LL16              	100.00%		A3LXM5              	100.00%
                    	       		A3GGT8              	71.45%
                    	       		A3LP97              	26.77%
                    	       		A3M0G3              	25.81%
Bootstrap support for Q8LL16 as seed ortholog is 100%.
Bootstrap support for A3LXM5 as seed ortholog is 100%.

Group of orthologs #892. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 S.stipitis:68

A8HZM9              	100.00%		A3LP75              	100.00%
A8J0L0              	25.54%		
Bootstrap support for A8HZM9 as seed ortholog is 95%.
Bootstrap support for A3LP75 as seed ortholog is 96%.

Group of orthologs #893. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 S.stipitis:153

A8JAQ8              	100.00%		A3GGS2              	100.00%
A8JAR0              	54.97%		
Bootstrap support for A8JAQ8 as seed ortholog is 97%.
Bootstrap support for A3GGS2 as seed ortholog is 100%.

Group of orthologs #894. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 S.stipitis:153

A8HVK4              	100.00%		A3LZL7              	100.00%
Bootstrap support for A8HVK4 as seed ortholog is 34%.
Alternative seed ortholog is A8JCX9 (6 bits away from this cluster)
Bootstrap support for A3LZL7 as seed ortholog is 100%.

Group of orthologs #895. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:153

A8I9R7              	100.00%		A3LUT4              	100.00%
Bootstrap support for A8I9R7 as seed ortholog is 100%.
Bootstrap support for A3LUT4 as seed ortholog is 100%.

Group of orthologs #896. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:95

A8J275              	100.00%		A3GGM6              	100.00%
Bootstrap support for A8J275 as seed ortholog is 100%.
Bootstrap support for A3GGM6 as seed ortholog is 99%.

Group of orthologs #897. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:153

A8IJ79              	100.00%		A3LWU4              	100.00%
Bootstrap support for A8IJ79 as seed ortholog is 100%.
Bootstrap support for A3LWU4 as seed ortholog is 100%.

Group of orthologs #898. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:153

A8ITR2              	100.00%		A3LZZ5              	100.00%
Bootstrap support for A8ITR2 as seed ortholog is 100%.
Bootstrap support for A3LZZ5 as seed ortholog is 100%.

Group of orthologs #899. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:153

A8J846              	100.00%		A3LQT9              	100.00%
Bootstrap support for A8J846 as seed ortholog is 100%.
Bootstrap support for A3LQT9 as seed ortholog is 100%.

Group of orthologs #900. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:153

A8IYP2              	100.00%		A3M0A8              	100.00%
Bootstrap support for A8IYP2 as seed ortholog is 100%.
Bootstrap support for A3M0A8 as seed ortholog is 100%.

Group of orthologs #901. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 S.stipitis:77

A8JB67              	100.00%		A3M070              	100.00%
Bootstrap support for A8JB67 as seed ortholog is 100%.
Bootstrap support for A3M070 as seed ortholog is 99%.

Group of orthologs #902. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:85

A8JC40              	100.00%		A3M0A3              	100.00%
Bootstrap support for A8JC40 as seed ortholog is 99%.
Bootstrap support for A3M0A3 as seed ortholog is 99%.

Group of orthologs #903. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 S.stipitis:53

A8I0Q7              	100.00%		A3GFE3              	100.00%
Bootstrap support for A8I0Q7 as seed ortholog is 100%.
Bootstrap support for A3GFE3 as seed ortholog is 93%.

Group of orthologs #904. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 S.stipitis:152

A8HWG5              	100.00%		A3LVQ7              	100.00%
Bootstrap support for A8HWG5 as seed ortholog is 100%.
Bootstrap support for A3LVQ7 as seed ortholog is 100%.

Group of orthologs #905. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 S.stipitis:152

A8IE44              	100.00%		A3LTY6              	100.00%
Bootstrap support for A8IE44 as seed ortholog is 99%.
Bootstrap support for A3LTY6 as seed ortholog is 100%.

Group of orthologs #906. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 S.stipitis:152

A8IWQ4              	100.00%		A3LP31              	100.00%
Bootstrap support for A8IWQ4 as seed ortholog is 99%.
Bootstrap support for A3LP31 as seed ortholog is 100%.

Group of orthologs #907. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 S.stipitis:152

A8J505              	100.00%		A3LNA4              	100.00%
Bootstrap support for A8J505 as seed ortholog is 100%.
Bootstrap support for A3LNA4 as seed ortholog is 100%.

Group of orthologs #908. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8J1W0              	100.00%		A3GG49              	100.00%
                    	       		A3LRK1              	21.72%
Bootstrap support for A8J1W0 as seed ortholog is 100%.
Bootstrap support for A3GG49 as seed ortholog is 100%.

Group of orthologs #909. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8HYG6              	100.00%		A3GHS1              	100.00%
Bootstrap support for A8HYG6 as seed ortholog is 100%.
Bootstrap support for A3GHS1 as seed ortholog is 100%.

Group of orthologs #910. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 S.stipitis:151

A8HQM3              	100.00%		A3LUE8              	100.00%
Bootstrap support for A8HQM3 as seed ortholog is 98%.
Bootstrap support for A3LUE8 as seed ortholog is 100%.

Group of orthologs #911. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8I2Y4              	100.00%		A3LQP9              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #912. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8HNB9              	100.00%		A3LZ79              	100.00%
Bootstrap support for A8HNB9 as seed ortholog is 100%.
Bootstrap support for A3LZ79 as seed ortholog is 100%.

Group of orthologs #913. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8IUH9              	100.00%		A3GG95              	100.00%
Bootstrap support for A8IUH9 as seed ortholog is 100%.
Bootstrap support for A3GG95 as seed ortholog is 100%.

Group of orthologs #914. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8IV15              	100.00%		A3GGU9              	100.00%
Bootstrap support for A8IV15 as seed ortholog is 100%.
Bootstrap support for A3GGU9 as seed ortholog is 100%.

Group of orthologs #915. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8JB79              	100.00%		A3GGM8              	100.00%
Bootstrap support for A8JB79 as seed ortholog is 100%.
Bootstrap support for A3GGM8 as seed ortholog is 100%.

Group of orthologs #916. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8JIN8              	100.00%		A3GG08              	100.00%
Bootstrap support for A8JIN8 as seed ortholog is 100%.
Bootstrap support for A3GG08 as seed ortholog is 100%.

Group of orthologs #917. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 S.stipitis:151

A8JCS0              	100.00%		A3LS61              	100.00%
Bootstrap support for A8JCS0 as seed ortholog is 100%.
Bootstrap support for A3LS61 as seed ortholog is 100%.

Group of orthologs #918. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 S.stipitis:150

A8HXH0              	100.00%		A3LXR4              	100.00%
Bootstrap support for A8HXH0 as seed ortholog is 100%.
Bootstrap support for A3LXR4 as seed ortholog is 100%.

Group of orthologs #919. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 S.stipitis:150

A8J097              	100.00%		A3LNS0              	100.00%
Bootstrap support for A8J097 as seed ortholog is 100%.
Bootstrap support for A3LNS0 as seed ortholog is 100%.

Group of orthologs #920. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 S.stipitis:150

A8JDX6              	100.00%		A3LUR1              	100.00%
Bootstrap support for A8JDX6 as seed ortholog is 95%.
Bootstrap support for A3LUR1 as seed ortholog is 100%.

Group of orthologs #921. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:63

A8JFE5              	100.00%		A3LR75              	100.00%
                    	       		A3LSY6              	63.20%
Bootstrap support for A8JFE5 as seed ortholog is 98%.
Bootstrap support for A3LR75 as seed ortholog is 97%.

Group of orthologs #922. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 S.stipitis:149

A8HPX6              	100.00%		A3GH24              	100.00%
Bootstrap support for A8HPX6 as seed ortholog is 69%.
Alternative seed ortholog is A8JE35 (17 bits away from this cluster)
Bootstrap support for A3GH24 as seed ortholog is 100%.

Group of orthologs #923. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 S.stipitis:149

A8INA8              	100.00%		A3GG02              	100.00%
Bootstrap support for A8INA8 as seed ortholog is 100%.
Bootstrap support for A3GG02 as seed ortholog is 100%.

Group of orthologs #924. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 S.stipitis:149

A8IQD6              	100.00%		A3LR76              	100.00%
Bootstrap support for A8IQD6 as seed ortholog is 100%.
Bootstrap support for A3LR76 as seed ortholog is 100%.

Group of orthologs #925. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 S.stipitis:149

A8IWM5              	100.00%		A3LNJ3              	100.00%
Bootstrap support for A8IWM5 as seed ortholog is 100%.
Bootstrap support for A3LNJ3 as seed ortholog is 100%.

Group of orthologs #926. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 S.stipitis:149

A8JAD3              	100.00%		A3LW35              	100.00%
Bootstrap support for A8JAD3 as seed ortholog is 100%.
Bootstrap support for A3LW35 as seed ortholog is 100%.

Group of orthologs #927. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 S.stipitis:149

A8JGK1              	100.00%		A3LQF1              	100.00%
Bootstrap support for A8JGK1 as seed ortholog is 100%.
Bootstrap support for A3LQF1 as seed ortholog is 100%.

Group of orthologs #928. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:149

Q8VZX3              	100.00%		A3GI69              	100.00%
Bootstrap support for Q8VZX3 as seed ortholog is 99%.
Bootstrap support for A3GI69 as seed ortholog is 100%.

Group of orthologs #929. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 S.stipitis:148

A8J8Q1              	100.00%		A3LP50              	100.00%
A8I4A0              	28.92%		
Bootstrap support for A8J8Q1 as seed ortholog is 92%.
Bootstrap support for A3LP50 as seed ortholog is 100%.

Group of orthologs #930. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8IBN0              	100.00%		A3GEY1              	100.00%
Bootstrap support for A8IBN0 as seed ortholog is 100%.
Bootstrap support for A3GEY1 as seed ortholog is 100%.

Group of orthologs #931. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8I0I1              	100.00%		A3LNE4              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for A3LNE4 as seed ortholog is 100%.

Group of orthologs #932. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:73

A8IDM5              	100.00%		A3GFK1              	100.00%
Bootstrap support for A8IDM5 as seed ortholog is 91%.
Bootstrap support for A3GFK1 as seed ortholog is 94%.

Group of orthologs #933. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8IQC1              	100.00%		A3GHY7              	100.00%
Bootstrap support for A8IQC1 as seed ortholog is 100%.
Bootstrap support for A3GHY7 as seed ortholog is 100%.

Group of orthologs #934. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8I032              	100.00%		A3LW50              	100.00%
Bootstrap support for A8I032 as seed ortholog is 100%.
Bootstrap support for A3LW50 as seed ortholog is 100%.

Group of orthologs #935. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8ITS3              	100.00%		A3LZR3              	100.00%
Bootstrap support for A8ITS3 as seed ortholog is 100%.
Bootstrap support for A3LZR3 as seed ortholog is 100%.

Group of orthologs #936. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8JCX4              	100.00%		A3GFD9              	100.00%
Bootstrap support for A8JCX4 as seed ortholog is 100%.
Bootstrap support for A3GFD9 as seed ortholog is 100%.

Group of orthologs #937. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 S.stipitis:148

A8JEE6              	100.00%		A3GFI8              	100.00%
Bootstrap support for A8JEE6 as seed ortholog is 100%.
Bootstrap support for A3GFI8 as seed ortholog is 100%.

Group of orthologs #938. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 S.stipitis:148

A8J5J2              	100.00%		A3LZC6              	100.00%
Bootstrap support for A8J5J2 as seed ortholog is 99%.
Bootstrap support for A3LZC6 as seed ortholog is 100%.

Group of orthologs #939. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 S.stipitis:147

A8HVW4              	100.00%		A3GGI9              	100.00%
                    	       		A3GGM0              	30.25%
Bootstrap support for A8HVW4 as seed ortholog is 56%.
Alternative seed ortholog is A8IKB4 (12 bits away from this cluster)
Bootstrap support for A3GGI9 as seed ortholog is 100%.

Group of orthologs #940. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 S.stipitis:147

A8HYT4              	100.00%		A3GGT1              	100.00%
Bootstrap support for A8HYT4 as seed ortholog is 100%.
Bootstrap support for A3GGT1 as seed ortholog is 100%.

Group of orthologs #941. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 S.stipitis:147

A8JAQ9              	100.00%		A3GGS3              	100.00%
Bootstrap support for A8JAQ9 as seed ortholog is 100%.
Bootstrap support for A3GGS3 as seed ortholog is 100%.

Group of orthologs #942. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 S.stipitis:56

A8IZB7              	100.00%		A3LXB0              	100.00%
Bootstrap support for A8IZB7 as seed ortholog is 66%.
Alternative seed ortholog is A8IIS4 (10 bits away from this cluster)
Bootstrap support for A3LXB0 as seed ortholog is 96%.

Group of orthologs #943. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:146

A8HMR3              	100.00%		A3LXJ4              	100.00%
Bootstrap support for A8HMR3 as seed ortholog is 99%.
Bootstrap support for A3LXJ4 as seed ortholog is 100%.

Group of orthologs #944. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:146

A8J1C2              	100.00%		A3LRC5              	100.00%
Bootstrap support for A8J1C2 as seed ortholog is 99%.
Bootstrap support for A3LRC5 as seed ortholog is 100%.

Group of orthologs #945. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 S.stipitis:146

A8JB06              	100.00%		A3LW68              	100.00%
Bootstrap support for A8JB06 as seed ortholog is 100%.
Bootstrap support for A3LW68 as seed ortholog is 100%.

Group of orthologs #946. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 S.stipitis:145

A8IV68              	100.00%		A3LMV7              	100.00%
A8HZ39              	14.39%		
Bootstrap support for A8IV68 as seed ortholog is 38%.
Alternative seed ortholog is A8JD26 (13 bits away from this cluster)
Bootstrap support for A3LMV7 as seed ortholog is 100%.

Group of orthologs #947. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 S.stipitis:8

A8IAI7              	100.00%		A3GGC2              	100.00%
Bootstrap support for A8IAI7 as seed ortholog is 100%.
Bootstrap support for A3GGC2 as seed ortholog is 72%.
Alternative seed ortholog is A3M077 (8 bits away from this cluster)

Group of orthologs #948. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 S.stipitis:145

A8HUC3              	100.00%		A3LUF8              	100.00%
Bootstrap support for A8HUC3 as seed ortholog is 100%.
Bootstrap support for A3LUF8 as seed ortholog is 100%.

Group of orthologs #949. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 S.stipitis:145

A8IZ68              	100.00%		A3LXF6              	100.00%
Bootstrap support for A8IZ68 as seed ortholog is 100%.
Bootstrap support for A3LXF6 as seed ortholog is 100%.

Group of orthologs #950. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 S.stipitis:145

A8JBL3              	100.00%		A3LWC0              	100.00%
Bootstrap support for A8JBL3 as seed ortholog is 100%.
Bootstrap support for A3LWC0 as seed ortholog is 100%.

Group of orthologs #951. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 S.stipitis:144

A8HUP9              	100.00%		A3LT49              	100.00%
Bootstrap support for A8HUP9 as seed ortholog is 100%.
Bootstrap support for A3LT49 as seed ortholog is 100%.

Group of orthologs #952. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 S.stipitis:144

A8IPS8              	100.00%		A3LN46              	100.00%
Bootstrap support for A8IPS8 as seed ortholog is 100%.
Bootstrap support for A3LN46 as seed ortholog is 100%.

Group of orthologs #953. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 S.stipitis:21

A8I6B9              	100.00%		A3LZU7              	100.00%
Bootstrap support for A8I6B9 as seed ortholog is 72%.
Alternative seed ortholog is A8JBX4 (20 bits away from this cluster)
Bootstrap support for A3LZU7 as seed ortholog is 26%.
Alternative seed ortholog is A3LSN6 (21 bits away from this cluster)

Group of orthologs #954. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 S.stipitis:144

A8JH26              	100.00%		A3LW88              	100.00%
Bootstrap support for A8JH26 as seed ortholog is 100%.
Bootstrap support for A3LW88 as seed ortholog is 100%.

Group of orthologs #955. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:74

A8JD32              	100.00%		A3LWA4              	100.00%
                    	       		A3LU11              	12.52%
                    	       		A3LUU0              	5.28%
Bootstrap support for A8JD32 as seed ortholog is 100%.
Bootstrap support for A3LWA4 as seed ortholog is 66%.
Alternative seed ortholog is A3LNV8 (74 bits away from this cluster)

Group of orthologs #956. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:143

A8HW46              	100.00%		A3LSB2              	100.00%
Bootstrap support for A8HW46 as seed ortholog is 100%.
Bootstrap support for A3LSB2 as seed ortholog is 100%.

Group of orthologs #957. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:143

A8IVC2              	100.00%		A3GFY9              	100.00%
Bootstrap support for A8IVC2 as seed ortholog is 100%.
Bootstrap support for A3GFY9 as seed ortholog is 100%.

Group of orthologs #958. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 S.stipitis:143

A8J6G9              	100.00%		A3LNL6              	100.00%
Bootstrap support for A8J6G9 as seed ortholog is 86%.
Bootstrap support for A3LNL6 as seed ortholog is 100%.

Group of orthologs #959. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:143

A8IYS8              	100.00%		A3M0J2              	100.00%
Bootstrap support for A8IYS8 as seed ortholog is 100%.
Bootstrap support for A3M0J2 as seed ortholog is 100%.

Group of orthologs #960. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:88

A8J6F4              	100.00%		A3LVG7              	100.00%
Bootstrap support for A8J6F4 as seed ortholog is 100%.
Bootstrap support for A3LVG7 as seed ortholog is 98%.

Group of orthologs #961. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 S.stipitis:36

A8JG06              	100.00%		A3LQ90              	100.00%
Bootstrap support for A8JG06 as seed ortholog is 100%.
Bootstrap support for A3LQ90 as seed ortholog is 71%.
Alternative seed ortholog is A3LNZ7 (36 bits away from this cluster)

Group of orthologs #962. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 S.stipitis:57

A8J1X0              	100.00%		A3LQ14              	100.00%
A8ISP5              	13.11%		
A8JHJ5              	9.56%		
Bootstrap support for A8J1X0 as seed ortholog is 92%.
Bootstrap support for A3LQ14 as seed ortholog is 94%.

Group of orthologs #963. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 S.stipitis:142

A8HQM1              	100.00%		A3GHM5              	100.00%
Bootstrap support for A8HQM1 as seed ortholog is 80%.
Bootstrap support for A3GHM5 as seed ortholog is 100%.

Group of orthologs #964. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 S.stipitis:142

A8IM89              	100.00%		A3LYP5              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for A3LYP5 as seed ortholog is 100%.

Group of orthologs #965. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 S.stipitis:142

A8J239              	100.00%		A3LV58              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for A3LV58 as seed ortholog is 100%.

Group of orthologs #966. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 S.stipitis:36

A8JBP5              	100.00%		A3LVX1              	100.00%
Bootstrap support for A8JBP5 as seed ortholog is 89%.
Bootstrap support for A3LVX1 as seed ortholog is 78%.

Group of orthologs #967. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 S.stipitis:141

A8IF73              	100.00%		A3LRB3              	100.00%
Bootstrap support for A8IF73 as seed ortholog is 100%.
Bootstrap support for A3LRB3 as seed ortholog is 100%.

Group of orthologs #968. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:22

A8J2A5              	100.00%		A3M0K7              	100.00%
Bootstrap support for A8J2A5 as seed ortholog is 90%.
Bootstrap support for A3M0K7 as seed ortholog is 73%.
Alternative seed ortholog is A3LSY5 (22 bits away from this cluster)

Group of orthologs #969. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 S.stipitis:141

P14149              	100.00%		A3GFR4              	100.00%
Bootstrap support for P14149 as seed ortholog is 82%.
Bootstrap support for A3GFR4 as seed ortholog is 100%.

Group of orthologs #970. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:141

A8JGJ7              	100.00%		A3LSA8              	100.00%
Bootstrap support for A8JGJ7 as seed ortholog is 92%.
Bootstrap support for A3LSA8 as seed ortholog is 100%.

Group of orthologs #971. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:140

A8IZW5              	100.00%		A3GH31              	100.00%
Bootstrap support for A8IZW5 as seed ortholog is 100%.
Bootstrap support for A3GH31 as seed ortholog is 100%.

Group of orthologs #972. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:140

A8J763              	100.00%		A3GHY4              	100.00%
Bootstrap support for A8J763 as seed ortholog is 100%.
Bootstrap support for A3GHY4 as seed ortholog is 100%.

Group of orthologs #973. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:140

A8IUV7              	100.00%		A3LX38              	100.00%
Bootstrap support for A8IUV7 as seed ortholog is 100%.
Bootstrap support for A3LX38 as seed ortholog is 100%.

Group of orthologs #974. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:140

A8J804              	100.00%		A3LY60              	100.00%
Bootstrap support for A8J804 as seed ortholog is 100%.
Bootstrap support for A3LY60 as seed ortholog is 100%.

Group of orthologs #975. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:140

A8J9B2              	100.00%		A3LYP2              	100.00%
Bootstrap support for A8J9B2 as seed ortholog is 100%.
Bootstrap support for A3LYP2 as seed ortholog is 100%.

Group of orthologs #976. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 S.stipitis:140

A8JFA0              	100.00%		A3LUL4              	100.00%
Bootstrap support for A8JFA0 as seed ortholog is 100%.
Bootstrap support for A3LUL4 as seed ortholog is 100%.

Group of orthologs #977. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8HMG7              	100.00%		A3LR81              	100.00%
Bootstrap support for A8HMG7 as seed ortholog is 100%.
Bootstrap support for A3LR81 as seed ortholog is 100%.

Group of orthologs #978. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8ISJ7              	100.00%		A3LQF3              	100.00%
Bootstrap support for A8ISJ7 as seed ortholog is 100%.
Bootstrap support for A3LQF3 as seed ortholog is 100%.

Group of orthologs #979. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8IXR5              	100.00%		A3GIA6              	100.00%
Bootstrap support for A8IXR5 as seed ortholog is 100%.
Bootstrap support for A3GIA6 as seed ortholog is 100%.

Group of orthologs #980. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8J3B2              	100.00%		A3GFT6              	100.00%
Bootstrap support for A8J3B2 as seed ortholog is 100%.
Bootstrap support for A3GFT6 as seed ortholog is 100%.

Group of orthologs #981. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8IIC7              	100.00%		A3LZV2              	100.00%
Bootstrap support for A8IIC7 as seed ortholog is 100%.
Bootstrap support for A3LZV2 as seed ortholog is 100%.

Group of orthologs #982. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8J5W6              	100.00%		A3LN59              	100.00%
Bootstrap support for A8J5W6 as seed ortholog is 100%.
Bootstrap support for A3LN59 as seed ortholog is 100%.

Group of orthologs #983. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:139

A8J8M9              	100.00%		A3LZ30              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #984. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 S.stipitis:139

A8JBQ5              	100.00%		A3LZN7              	100.00%
Bootstrap support for A8JBQ5 as seed ortholog is 100%.
Bootstrap support for A3LZN7 as seed ortholog is 100%.

Group of orthologs #985. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 S.stipitis:138

A8JAD2              	100.00%		A3LS01              	100.00%
A5YU14              	100.00%		A3LRT5              	100.00%
A8HMC1              	100.00%		A3LSP0              	100.00%
                    	       		A3LR60              	58.72%
                    	       		A3LZV9              	45.35%
Bootstrap support for A8JAD2 as seed ortholog is 97%.
Bootstrap support for A5YU14 as seed ortholog is 90%.
Bootstrap support for A8HMC1 as seed ortholog is 88%.
Bootstrap support for A3LS01 as seed ortholog is 100%.
Bootstrap support for A3LRT5 as seed ortholog is 100%.
Bootstrap support for A3LSP0 as seed ortholog is 100%.

Group of orthologs #986. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 S.stipitis:138

A8ILL7              	100.00%		A3LWX1              	100.00%
A8I318              	27.63%		
A8ILM1              	23.86%		
Bootstrap support for A8ILL7 as seed ortholog is 99%.
Bootstrap support for A3LWX1 as seed ortholog is 100%.

Group of orthologs #987. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 S.stipitis:138

A8HXN9              	100.00%		A3GFA9              	100.00%
Bootstrap support for A8HXN9 as seed ortholog is 100%.
Bootstrap support for A3GFA9 as seed ortholog is 100%.

Group of orthologs #988. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 S.stipitis:138

A8IV35              	100.00%		A3GH11              	100.00%
Bootstrap support for A8IV35 as seed ortholog is 100%.
Bootstrap support for A3GH11 as seed ortholog is 100%.

Group of orthologs #989. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 S.stipitis:138

A8IW47              	100.00%		A3LV74              	100.00%
Bootstrap support for A8IW47 as seed ortholog is 100%.
Bootstrap support for A3LV74 as seed ortholog is 100%.

Group of orthologs #990. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:138

A8IUX2              	100.00%		A3LW63              	100.00%
Bootstrap support for A8IUX2 as seed ortholog is 92%.
Bootstrap support for A3LW63 as seed ortholog is 100%.

Group of orthologs #991. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 S.stipitis:138

A8JG85              	100.00%		A3GGN3              	100.00%
Bootstrap support for A8JG85 as seed ortholog is 100%.
Bootstrap support for A3GGN3 as seed ortholog is 100%.

Group of orthologs #992. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 S.stipitis:136

A8JGL7              	94.68%		A3GGQ9              	100.00%
A8JGL6              	100.00%		A3LRZ1              	100.00%
A8JGL5              	66.11%		A3LSP8              	66.60%
A8JJW2              	56.98%		A3LWG4              	40.85%
A8JGL3              	35.22%		A3GGQ8              	40.62%
A8I7K6              	22.59%		A3GH15              	36.42%
                    	       		A3LTD2              	36.22%
                    	       		A3LN54              	36.22%
                    	       		A3LNV4              	35.84%
                    	       		A3LS83              	33.72%
                    	       		A3LZM3              	31.41%
                    	       		A3LS63              	31.25%
                    	       		A3LWY5              	28.71%
Bootstrap support for A8JGL6 as seed ortholog is 100%.
Bootstrap support for A3GGQ9 as seed ortholog is 100%.
Bootstrap support for A3LRZ1 as seed ortholog is 100%.

Group of orthologs #993. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 S.stipitis:57

A8IF06              	100.00%		A3M0M6              	100.00%
                    	       		A3LW09              	12.84%
Bootstrap support for A8IF06 as seed ortholog is 100%.
Bootstrap support for A3M0M6 as seed ortholog is 89%.

Group of orthologs #994. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 S.stipitis:136

A8J0K1              	100.00%		A3LW07              	100.00%
Q70ZL8              	95.72%		
Bootstrap support for A8J0K1 as seed ortholog is 100%.
Bootstrap support for A3LW07 as seed ortholog is 100%.

Group of orthologs #995. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 S.stipitis:136

A8HUK0              	100.00%		A3LPE9              	100.00%
Bootstrap support for A8HUK0 as seed ortholog is 97%.
Bootstrap support for A3LPE9 as seed ortholog is 100%.

Group of orthologs #996. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 S.stipitis:136

A8I949              	100.00%		A3LQZ2              	100.00%
Bootstrap support for A8I949 as seed ortholog is 100%.
Bootstrap support for A3LQZ2 as seed ortholog is 100%.

Group of orthologs #997. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 S.stipitis:136

A8ICT1              	100.00%		A3LS70              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for A3LS70 as seed ortholog is 100%.

Group of orthologs #998. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 S.stipitis:136

A8JHY2              	100.00%		A3LVD1              	100.00%
Bootstrap support for A8JHY2 as seed ortholog is 100%.
Bootstrap support for A3LVD1 as seed ortholog is 100%.

Group of orthologs #999. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 S.stipitis:135

A8IJF1              	100.00%		A3LYQ8              	100.00%
Bootstrap support for A8IJF1 as seed ortholog is 100%.
Bootstrap support for A3LYQ8 as seed ortholog is 100%.

Group of orthologs #1000. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 S.stipitis:135

A8JAI8              	100.00%		A3LQN2              	100.00%
Bootstrap support for A8JAI8 as seed ortholog is 100%.
Bootstrap support for A3LQN2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 S.stipitis:135

A8J507              	100.00%		A3LYT8              	100.00%
Bootstrap support for A8J507 as seed ortholog is 100%.
Bootstrap support for A3LYT8 as seed ortholog is 100%.

Group of orthologs #1002. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 S.stipitis:135

A8J7S5              	100.00%		A3LXS1              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for A3LXS1 as seed ortholog is 100%.

Group of orthologs #1003. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 S.stipitis:134

A8I1K5              	100.00%		A3LMS3              	100.00%
A8HXY3              	23.86%		
Bootstrap support for A8I1K5 as seed ortholog is 100%.
Bootstrap support for A3LMS3 as seed ortholog is 100%.

Group of orthologs #1004. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 S.stipitis:134

A8HVT9              	100.00%		A3GEW1              	100.00%
Bootstrap support for A8HVT9 as seed ortholog is 100%.
Bootstrap support for A3GEW1 as seed ortholog is 100%.

Group of orthologs #1005. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:48

A8I9M5              	100.00%		A3GHI2              	100.00%
Bootstrap support for A8I9M5 as seed ortholog is 97%.
Bootstrap support for A3GHI2 as seed ortholog is 97%.

Group of orthologs #1006. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 S.stipitis:134

A8HQE3              	100.00%		A3LUL0              	100.00%
Bootstrap support for A8HQE3 as seed ortholog is 100%.
Bootstrap support for A3LUL0 as seed ortholog is 100%.

Group of orthologs #1007. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 S.stipitis:134

A8JIP9              	100.00%		A3GF39              	100.00%
Bootstrap support for A8JIP9 as seed ortholog is 63%.
Alternative seed ortholog is A8J4W1 (23 bits away from this cluster)
Bootstrap support for A3GF39 as seed ortholog is 100%.

Group of orthologs #1008. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 S.stipitis:133

A8HMG4              	100.00%		A3LNH6              	100.00%
Bootstrap support for A8HMG4 as seed ortholog is 100%.
Bootstrap support for A3LNH6 as seed ortholog is 100%.

Group of orthologs #1009. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 S.stipitis:133

A8I2Q0              	100.00%		A3GG01              	100.00%
Bootstrap support for A8I2Q0 as seed ortholog is 100%.
Bootstrap support for A3GG01 as seed ortholog is 100%.

Group of orthologs #1010. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 S.stipitis:133

A8IBT5              	100.00%		A3LV47              	100.00%
Bootstrap support for A8IBT5 as seed ortholog is 100%.
Bootstrap support for A3LV47 as seed ortholog is 100%.

Group of orthologs #1011. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 S.stipitis:133

A8J0V7              	100.00%		A3LQU1              	100.00%
Bootstrap support for A8J0V7 as seed ortholog is 100%.
Bootstrap support for A3LQU1 as seed ortholog is 100%.

Group of orthologs #1012. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:133

A8J7D5              	100.00%		A3GIA5              	100.00%
Bootstrap support for A8J7D5 as seed ortholog is 98%.
Bootstrap support for A3GIA5 as seed ortholog is 100%.

Group of orthologs #1013. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 S.stipitis:133

A8JBG7              	100.00%		A3LX44              	100.00%
Bootstrap support for A8JBG7 as seed ortholog is 100%.
Bootstrap support for A3LX44 as seed ortholog is 100%.

Group of orthologs #1014. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 S.stipitis:133

A8JEC1              	100.00%		A3LZ40              	100.00%
Bootstrap support for A8JEC1 as seed ortholog is 100%.
Bootstrap support for A3LZ40 as seed ortholog is 100%.

Group of orthologs #1015. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 S.stipitis:132

A8JFU7              	100.00%		A3LU47              	100.00%
A8HSY2              	29.35%		A3LUM3              	33.40%
A8JFU8              	24.03%		
A8JD29              	6.62%		
Bootstrap support for A8JFU7 as seed ortholog is 100%.
Bootstrap support for A3LU47 as seed ortholog is 100%.

Group of orthologs #1016. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 S.stipitis:132

A8J7C5              	100.00%		A3LXY3              	100.00%
A8J7C6              	50.10%		
A8J7C7              	30.21%		
Bootstrap support for A8J7C5 as seed ortholog is 100%.
Bootstrap support for A3LXY3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 S.stipitis:132

A8HSS5              	100.00%		A3LQS6              	100.00%
Bootstrap support for A8HSS5 as seed ortholog is 100%.
Bootstrap support for A3LQS6 as seed ortholog is 100%.

Group of orthologs #1018. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 S.stipitis:132

A8J2G4              	100.00%		A3LV31              	100.00%
Bootstrap support for A8J2G4 as seed ortholog is 100%.
Bootstrap support for A3LV31 as seed ortholog is 100%.

Group of orthologs #1019. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 S.stipitis:132

Q5K1Y0              	100.00%		A3LZD3              	100.00%
Bootstrap support for Q5K1Y0 as seed ortholog is 100%.
Bootstrap support for A3LZD3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:131

A8HXD0              	100.00%		A3LXP5              	100.00%
Bootstrap support for A8HXD0 as seed ortholog is 100%.
Bootstrap support for A3LXP5 as seed ortholog is 100%.

Group of orthologs #1021. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:131

A8IRQ1              	100.00%		A3LP13              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for A3LP13 as seed ortholog is 100%.

Group of orthologs #1022. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:131

A8HVG5              	100.00%		A3M0M8              	100.00%
Bootstrap support for A8HVG5 as seed ortholog is 99%.
Bootstrap support for A3M0M8 as seed ortholog is 100%.

Group of orthologs #1023. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:131

A8J743              	100.00%		A3LS44              	100.00%
Bootstrap support for A8J743 as seed ortholog is 100%.
Bootstrap support for A3LS44 as seed ortholog is 100%.

Group of orthologs #1024. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 S.stipitis:131

A8J5T0              	100.00%		O13393              	100.00%
Bootstrap support for A8J5T0 as seed ortholog is 100%.
Bootstrap support for O13393 as seed ortholog is 100%.

Group of orthologs #1025. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 S.stipitis:130

A8HY08              	100.00%		A3LVS4              	100.00%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for A3LVS4 as seed ortholog is 100%.

Group of orthologs #1026. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:129

A8HYH9              	100.00%		A3LXU5              	100.00%
A8HM37              	17.87%		
Bootstrap support for A8HYH9 as seed ortholog is 100%.
Bootstrap support for A3LXU5 as seed ortholog is 100%.

Group of orthologs #1027. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:129

A8IQZ3              	100.00%		A3LTW3              	100.00%
Bootstrap support for A8IQZ3 as seed ortholog is 100%.
Bootstrap support for A3LTW3 as seed ortholog is 100%.

Group of orthologs #1028. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:129

A8JG39              	100.00%		A3LS75              	100.00%
Bootstrap support for A8JG39 as seed ortholog is 100%.
Bootstrap support for A3LS75 as seed ortholog is 100%.

Group of orthologs #1029. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:129

A8JH99              	100.00%		A3LR86              	100.00%
Bootstrap support for A8JH99 as seed ortholog is 100%.
Bootstrap support for A3LR86 as seed ortholog is 100%.

Group of orthologs #1030. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 S.stipitis:129

A8JGY2              	100.00%		A3LU64              	100.00%
Bootstrap support for A8JGY2 as seed ortholog is 100%.
Bootstrap support for A3LU64 as seed ortholog is 100%.

Group of orthologs #1031. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 S.stipitis:88

A8JEY5              	100.00%		A3LY98              	100.00%
Bootstrap support for A8JEY5 as seed ortholog is 93%.
Bootstrap support for A3LY98 as seed ortholog is 99%.

Group of orthologs #1032. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 S.stipitis:129

Q9LLJ1              	100.00%		A3LUT3              	100.00%
Bootstrap support for Q9LLJ1 as seed ortholog is 82%.
Bootstrap support for A3LUT3 as seed ortholog is 100%.

Group of orthologs #1033. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 S.stipitis:128

A8IYT7              	100.00%		A3GEX9              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #1034. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 S.stipitis:128

A8IUN8              	100.00%		A3LQN8              	100.00%
Bootstrap support for A8IUN8 as seed ortholog is 100%.
Bootstrap support for A3LQN8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 S.stipitis:128

A8IVF0              	100.00%		A3M096              	100.00%
Bootstrap support for A8IVF0 as seed ortholog is 100%.
Bootstrap support for A3M096 as seed ortholog is 100%.

Group of orthologs #1036. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 S.stipitis:128

A8JHR1              	100.00%		A3LNU6              	100.00%
Bootstrap support for A8JHR1 as seed ortholog is 100%.
Bootstrap support for A3LNU6 as seed ortholog is 100%.

Group of orthologs #1037. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 S.stipitis:128

A8JDZ8              	100.00%		A3LVZ2              	100.00%
Bootstrap support for A8JDZ8 as seed ortholog is 100%.
Bootstrap support for A3LVZ2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:58

A8JGV4              	100.00%		A3LZX3              	100.00%
                    	       		A3LPI1              	78.45%
                    	       		A3GHL5              	12.50%
Bootstrap support for A8JGV4 as seed ortholog is 97%.
Bootstrap support for A3LZX3 as seed ortholog is 98%.

Group of orthologs #1039. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 S.stipitis:20

A8ICX5              	100.00%		A3GF98              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for A3GF98 as seed ortholog is 72%.
Alternative seed ortholog is A3GGP5 (20 bits away from this cluster)

Group of orthologs #1040. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 S.stipitis:126

A8HWS3              	100.00%		A3LQW0              	100.00%
Bootstrap support for A8HWS3 as seed ortholog is 100%.
Bootstrap support for A3LQW0 as seed ortholog is 100%.

Group of orthologs #1041. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 S.stipitis:126

A8IJ00              	100.00%		A3GFC3              	100.00%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for A3GFC3 as seed ortholog is 100%.

Group of orthologs #1042. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:126

A8J1W4              	100.00%		A3LTX8              	100.00%
Bootstrap support for A8J1W4 as seed ortholog is 99%.
Bootstrap support for A3LTX8 as seed ortholog is 100%.

Group of orthologs #1043. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 S.stipitis:126

A8JB74              	100.00%		A3LZC9              	100.00%
Bootstrap support for A8JB74 as seed ortholog is 100%.
Bootstrap support for A3LZC9 as seed ortholog is 100%.

Group of orthologs #1044. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:125

A8J576              	100.00%		A3LZ02              	100.00%
A8J0V6              	16.36%		A3GFX8              	75.00%
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for A3LZ02 as seed ortholog is 100%.

Group of orthologs #1045. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:125

A8HNM7              	100.00%		A3LT13              	100.00%
A8J2C6              	7.14%		
Bootstrap support for A8HNM7 as seed ortholog is 100%.
Bootstrap support for A3LT13 as seed ortholog is 100%.

Group of orthologs #1046. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:125

A8I074              	100.00%		A3LW18              	100.00%
Bootstrap support for A8I074 as seed ortholog is 100%.
Bootstrap support for A3LW18 as seed ortholog is 100%.

Group of orthologs #1047. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:125

A8ILG8              	100.00%		A3LUJ7              	100.00%
Bootstrap support for A8ILG8 as seed ortholog is 100%.
Bootstrap support for A3LUJ7 as seed ortholog is 100%.

Group of orthologs #1048. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:125

A8J2W3              	100.00%		A3GI95              	100.00%
Bootstrap support for A8J2W3 as seed ortholog is 100%.
Bootstrap support for A3GI95 as seed ortholog is 100%.

Group of orthologs #1049. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 S.stipitis:125

A8J757              	100.00%		A3LPF1              	100.00%
Bootstrap support for A8J757 as seed ortholog is 100%.
Bootstrap support for A3LPF1 as seed ortholog is 100%.

Group of orthologs #1050. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 S.stipitis:68

A8JEQ2              	100.00%		A3LU21              	100.00%
                    	       		A3GG78              	88.52%
                    	       		A3GH10              	86.43%
                    	       		A3GGR3              	75.48%
                    	       		A3LW44              	68.70%
Bootstrap support for A8JEQ2 as seed ortholog is 78%.
Bootstrap support for A3LU21 as seed ortholog is 96%.

Group of orthologs #1051. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 S.stipitis:124

A8J4Q0              	100.00%		A3LV39              	100.00%
A8IYW1              	29.16%		
Q75NZ3              	26.24%		
Q6IYG4              	5.66%		
Bootstrap support for A8J4Q0 as seed ortholog is 100%.
Bootstrap support for A3LV39 as seed ortholog is 100%.

Group of orthologs #1052. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 S.stipitis:124

A8J9C1              	100.00%		A3LZ99              	100.00%
A8JBN8              	5.06%		
Bootstrap support for A8J9C1 as seed ortholog is 77%.
Bootstrap support for A3LZ99 as seed ortholog is 100%.

Group of orthologs #1053. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:124

A8I586              	100.00%		A3LR08              	100.00%
Bootstrap support for A8I586 as seed ortholog is 99%.
Bootstrap support for A3LR08 as seed ortholog is 100%.

Group of orthologs #1054. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:84

A8HN54              	100.00%		A3LZQ4              	100.00%
Bootstrap support for A8HN54 as seed ortholog is 94%.
Bootstrap support for A3LZQ4 as seed ortholog is 97%.

Group of orthologs #1055. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 S.stipitis:124

A8J7Q4              	100.00%		A3LT93              	100.00%
Bootstrap support for A8J7Q4 as seed ortholog is 100%.
Bootstrap support for A3LT93 as seed ortholog is 100%.

Group of orthologs #1056. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:77

Q944M8              	100.00%		A3LTG5              	100.00%
Bootstrap support for Q944M8 as seed ortholog is 99%.
Bootstrap support for A3LTG5 as seed ortholog is 99%.

Group of orthologs #1057. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 S.stipitis:62

A8J0N4              	100.00%		A3LRS9              	100.00%
A8JBW4              	9.76%		
Bootstrap support for A8J0N4 as seed ortholog is 69%.
Alternative seed ortholog is A8J587 (14 bits away from this cluster)
Bootstrap support for A3LRS9 as seed ortholog is 93%.

Group of orthologs #1058. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 S.stipitis:123

A8J8V0              	100.00%		A3LYI3              	100.00%
                    	       		A3LXL2              	9.80%
Bootstrap support for A8J8V0 as seed ortholog is 84%.
Bootstrap support for A3LYI3 as seed ortholog is 100%.

Group of orthologs #1059. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:123

A8JBW3              	100.00%		A3LXJ3              	100.00%
                    	       		A3LND9              	37.13%
Bootstrap support for A8JBW3 as seed ortholog is 97%.
Bootstrap support for A3LXJ3 as seed ortholog is 100%.

Group of orthologs #1060. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:123

A8HW92              	100.00%		A3GGU2              	100.00%
Bootstrap support for A8HW92 as seed ortholog is 100%.
Bootstrap support for A3GGU2 as seed ortholog is 100%.

Group of orthologs #1061. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:123

A8I5V9              	100.00%		A3GGF3              	100.00%
Bootstrap support for A8I5V9 as seed ortholog is 100%.
Bootstrap support for A3GGF3 as seed ortholog is 100%.

Group of orthologs #1062. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 S.stipitis:45

A8I1T0              	100.00%		A3LTN1              	100.00%
Bootstrap support for A8I1T0 as seed ortholog is 70%.
Alternative seed ortholog is A8J1L9 (38 bits away from this cluster)
Bootstrap support for A3LTN1 as seed ortholog is 85%.

Group of orthologs #1063. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:123

A8I403              	100.00%		A3LZU1              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for A3LZU1 as seed ortholog is 100%.

Group of orthologs #1064. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:123

A8J724              	100.00%		A3LS37              	100.00%
Bootstrap support for A8J724 as seed ortholog is 100%.
Bootstrap support for A3LS37 as seed ortholog is 100%.

Group of orthologs #1065. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:123

A8J5M9              	100.00%		A3LZ13              	100.00%
Bootstrap support for A8J5M9 as seed ortholog is 100%.
Bootstrap support for A3LZ13 as seed ortholog is 100%.

Group of orthologs #1066. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 S.stipitis:123

A8JBN4              	100.00%		A3LXC2              	100.00%
Bootstrap support for A8JBN4 as seed ortholog is 100%.
Bootstrap support for A3LXC2 as seed ortholog is 100%.

Group of orthologs #1067. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 S.stipitis:122

A8J4K2              	100.00%		A3LR91              	100.00%
A8HVF8              	20.34%		
Bootstrap support for A8J4K2 as seed ortholog is 100%.
Bootstrap support for A3LR91 as seed ortholog is 100%.

Group of orthologs #1068. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 S.stipitis:122

A8JI00              	100.00%		A3GI20              	100.00%
A8IY58              	10.38%		
Bootstrap support for A8JI00 as seed ortholog is 100%.
Bootstrap support for A3GI20 as seed ortholog is 100%.

Group of orthologs #1069. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 S.stipitis:122

A8HVC8              	100.00%		A3LRK6              	100.00%
Bootstrap support for A8HVC8 as seed ortholog is 100%.
Bootstrap support for A3LRK6 as seed ortholog is 100%.

Group of orthologs #1070. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 S.stipitis:122

A8IY04              	100.00%		A3GFN2              	100.00%
Bootstrap support for A8IY04 as seed ortholog is 100%.
Bootstrap support for A3GFN2 as seed ortholog is 100%.

Group of orthologs #1071. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 S.stipitis:122

A8IP53              	100.00%		A3LVH2              	100.00%
Bootstrap support for A8IP53 as seed ortholog is 100%.
Bootstrap support for A3LVH2 as seed ortholog is 100%.

Group of orthologs #1072. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 S.stipitis:122

A8JHF0              	100.00%		A3GGG5              	100.00%
Bootstrap support for A8JHF0 as seed ortholog is 100%.
Bootstrap support for A3GGG5 as seed ortholog is 100%.

Group of orthologs #1073. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:121

A8JGJ2              	100.00%		A3LMU3              	100.00%
                    	       		A3GI73              	14.83%
Bootstrap support for A8JGJ2 as seed ortholog is 100%.
Bootstrap support for A3LMU3 as seed ortholog is 100%.

Group of orthologs #1074. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:121

A8ICX2              	100.00%		A3GF63              	100.00%
Bootstrap support for A8ICX2 as seed ortholog is 100%.
Bootstrap support for A3GF63 as seed ortholog is 100%.

Group of orthologs #1075. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:121

A8I678              	100.00%		A3LTC9              	100.00%
Bootstrap support for A8I678 as seed ortholog is 100%.
Bootstrap support for A3LTC9 as seed ortholog is 100%.

Group of orthologs #1076. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 S.stipitis:121

A8IGG2              	100.00%		A3LQL5              	100.00%
Bootstrap support for A8IGG2 as seed ortholog is 73%.
Alternative seed ortholog is A8HUJ7 (19 bits away from this cluster)
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #1077. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:121

A8IS22              	100.00%		A3LRP1              	100.00%
Bootstrap support for A8IS22 as seed ortholog is 100%.
Bootstrap support for A3LRP1 as seed ortholog is 100%.

Group of orthologs #1078. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:121

A8IY22              	100.00%		A3LZW2              	100.00%
Bootstrap support for A8IY22 as seed ortholog is 100%.
Bootstrap support for A3LZW2 as seed ortholog is 100%.

Group of orthologs #1079. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 S.stipitis:121

A8JBC8              	100.00%		A3LZL2              	100.00%
Bootstrap support for A8JBC8 as seed ortholog is 100%.
Bootstrap support for A3LZL2 as seed ortholog is 100%.

Group of orthologs #1080. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 S.stipitis:120

A8I7J0              	100.00%		A3LMS0              	100.00%
Bootstrap support for A8I7J0 as seed ortholog is 99%.
Bootstrap support for A3LMS0 as seed ortholog is 100%.

Group of orthologs #1081. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:38

A8HY41              	100.00%		A3LSR9              	100.00%
A8HXX4              	7.82%		
Bootstrap support for A8HY41 as seed ortholog is 94%.
Bootstrap support for A3LSR9 as seed ortholog is 84%.

Group of orthologs #1082. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8IBG1              	100.00%		A3LNK5              	100.00%
Bootstrap support for A8IBG1 as seed ortholog is 100%.
Bootstrap support for A3LNK5 as seed ortholog is 100%.

Group of orthologs #1083. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8IPC9              	100.00%		A3LQN1              	100.00%
Bootstrap support for A8IPC9 as seed ortholog is 100%.
Bootstrap support for A3LQN1 as seed ortholog is 100%.

Group of orthologs #1084. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8ICE1              	100.00%		A3LV45              	100.00%
Bootstrap support for A8ICE1 as seed ortholog is 100%.
Bootstrap support for A3LV45 as seed ortholog is 100%.

Group of orthologs #1085. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8IIE6              	100.00%		A3LTJ4              	100.00%
Bootstrap support for A8IIE6 as seed ortholog is 100%.
Bootstrap support for A3LTJ4 as seed ortholog is 100%.

Group of orthologs #1086. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8I1Y7              	100.00%		A3M0G9              	100.00%
Bootstrap support for A8I1Y7 as seed ortholog is 100%.
Bootstrap support for A3M0G9 as seed ortholog is 100%.

Group of orthologs #1087. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8JAP4              	100.00%		A3GFM5              	100.00%
Bootstrap support for A8JAP4 as seed ortholog is 100%.
Bootstrap support for A3GFM5 as seed ortholog is 100%.

Group of orthologs #1088. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

A8J2P8              	100.00%		A3LVF4              	100.00%
Bootstrap support for A8J2P8 as seed ortholog is 100%.
Bootstrap support for A3LVF4 as seed ortholog is 100%.

Group of orthologs #1089. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 S.stipitis:119

Q6U9W9              	100.00%		A3LPE2              	100.00%
Bootstrap support for Q6U9W9 as seed ortholog is 100%.
Bootstrap support for A3LPE2 as seed ortholog is 100%.

Group of orthologs #1090. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 S.stipitis:118

A8J740              	100.00%		A3GHV4              	100.00%
A8J741              	16.56%		
A8J746              	13.91%		
Bootstrap support for A8J740 as seed ortholog is 93%.
Bootstrap support for A3GHV4 as seed ortholog is 100%.

Group of orthologs #1091. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 S.stipitis:118

A8JEN2              	100.00%		A3LQC4              	100.00%
A8J015              	20.54%		A3LYC5              	17.75%
Bootstrap support for A8JEN2 as seed ortholog is 100%.
Bootstrap support for A3LQC4 as seed ortholog is 100%.

Group of orthologs #1092. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 S.stipitis:118

A8I728              	100.00%		A3LTT4              	100.00%
Bootstrap support for A8I728 as seed ortholog is 100%.
Bootstrap support for A3LTT4 as seed ortholog is 100%.

Group of orthologs #1093. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 S.stipitis:118

A8IR40              	100.00%		A3LQQ0              	100.00%
Bootstrap support for A8IR40 as seed ortholog is 100%.
Bootstrap support for A3LQQ0 as seed ortholog is 100%.

Group of orthologs #1094. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 S.stipitis:118

A8IR25              	100.00%		A3LQS5              	100.00%
Bootstrap support for A8IR25 as seed ortholog is 100%.
Bootstrap support for A3LQS5 as seed ortholog is 100%.

Group of orthologs #1095. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 S.stipitis:118

A8J028              	100.00%		A3LUV2              	100.00%
Bootstrap support for A8J028 as seed ortholog is 100%.
Bootstrap support for A3LUV2 as seed ortholog is 100%.

Group of orthologs #1096. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:118

A8JE85              	100.00%		A3LNE5              	100.00%
Bootstrap support for A8JE85 as seed ortholog is 98%.
Bootstrap support for A3LNE5 as seed ortholog is 100%.

Group of orthologs #1097. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 S.stipitis:118

Q84TR5              	100.00%		A3GFL9              	100.00%
Bootstrap support for Q84TR5 as seed ortholog is 100%.
Bootstrap support for A3GFL9 as seed ortholog is 100%.

Group of orthologs #1098. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:118

A8JES1              	100.00%		A3M0H3              	100.00%
Bootstrap support for A8JES1 as seed ortholog is 92%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #1099. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:117

A8I424              	100.00%		A3LPF7              	100.00%
A8IFX8              	50.46%		
A8J502              	46.42%		
A8IZ39              	32.48%		
A8IUJ9              	9.17%		
A8I041              	5.69%		
Bootstrap support for A8I424 as seed ortholog is 100%.
Bootstrap support for A3LPF7 as seed ortholog is 100%.

Group of orthologs #1100. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:117

A8I4U2              	100.00%		A3LPR9              	100.00%
Bootstrap support for A8I4U2 as seed ortholog is 100%.
Bootstrap support for A3LPR9 as seed ortholog is 100%.

Group of orthologs #1101. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:117

A8I6I8              	100.00%		A3LTF6              	100.00%
Bootstrap support for A8I6I8 as seed ortholog is 100%.
Bootstrap support for A3LTF6 as seed ortholog is 100%.

Group of orthologs #1102. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:117

A8JDV2              	100.00%		A3GHD3              	100.00%
Bootstrap support for A8JDV2 as seed ortholog is 100%.
Bootstrap support for A3GHD3 as seed ortholog is 100%.

Group of orthologs #1103. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 S.stipitis:117

A8JCG8              	100.00%		A3LSS0              	100.00%
Bootstrap support for A8JCG8 as seed ortholog is 100%.
Bootstrap support for A3LSS0 as seed ortholog is 100%.

Group of orthologs #1104. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:116

A8HPM9              	100.00%		A3LQ88              	100.00%
Bootstrap support for A8HPM9 as seed ortholog is 100%.
Bootstrap support for A3LQ88 as seed ortholog is 100%.

Group of orthologs #1105. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:116

A8HTH0              	100.00%		A3LV46              	100.00%
Bootstrap support for A8HTH0 as seed ortholog is 100%.
Bootstrap support for A3LV46 as seed ortholog is 100%.

Group of orthologs #1106. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:17

A8IBS4              	100.00%		A3LRR8              	100.00%
Bootstrap support for A8IBS4 as seed ortholog is 100%.
Bootstrap support for A3LRR8 as seed ortholog is 69%.
Alternative seed ortholog is A3LPL1 (17 bits away from this cluster)

Group of orthologs #1107. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:116

A8IYC8              	100.00%		A3LTH4              	100.00%
Bootstrap support for A8IYC8 as seed ortholog is 100%.
Bootstrap support for A3LTH4 as seed ortholog is 100%.

Group of orthologs #1108. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:42

A8J3V3              	100.00%		A3LXX0              	100.00%
Bootstrap support for A8J3V3 as seed ortholog is 100%.
Bootstrap support for A3LXX0 as seed ortholog is 85%.

Group of orthologs #1109. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 S.stipitis:116

A8JI92              	100.00%		A3GHX2              	100.00%
Bootstrap support for A8JI92 as seed ortholog is 100%.
Bootstrap support for A3GHX2 as seed ortholog is 100%.

Group of orthologs #1110. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 S.stipitis:116

A8JGY1              	100.00%		A3LNX5              	100.00%
Bootstrap support for A8JGY1 as seed ortholog is 79%.
Bootstrap support for A3LNX5 as seed ortholog is 100%.

Group of orthologs #1111. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 S.stipitis:116

A8JH05              	100.00%		A3LWS1              	100.00%
Bootstrap support for A8JH05 as seed ortholog is 74%.
Alternative seed ortholog is A8I7Q4 (14 bits away from this cluster)
Bootstrap support for A3LWS1 as seed ortholog is 100%.

Group of orthologs #1112. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:5

A8IYT3              	100.00%		A3GFG2              	100.00%
A8I2Y2              	20.44%		A3LUB3              	36.59%
A8J0I9              	9.92%		
Bootstrap support for A8IYT3 as seed ortholog is 89%.
Bootstrap support for A3GFG2 as seed ortholog is 45%.
Alternative seed ortholog is A3LNQ0 (5 bits away from this cluster)

Group of orthologs #1113. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:115

A8IRW9              	100.00%		A3GHQ3              	100.00%
A8IRW7              	23.05%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for A3GHQ3 as seed ortholog is 100%.

Group of orthologs #1114. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:115

A8HUN7              	100.00%		A3GIA8              	100.00%
Bootstrap support for A8HUN7 as seed ortholog is 100%.
Bootstrap support for A3GIA8 as seed ortholog is 100%.

Group of orthologs #1115. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:115

A8IVT5              	100.00%		A3GFP4              	100.00%
Bootstrap support for A8IVT5 as seed ortholog is 100%.
Bootstrap support for A3GFP4 as seed ortholog is 100%.

Group of orthologs #1116. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:115

A8I4N7              	100.00%		A3LW94              	100.00%
Bootstrap support for A8I4N7 as seed ortholog is 100%.
Bootstrap support for A3LW94 as seed ortholog is 100%.

Group of orthologs #1117. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:115

A8IRX8              	100.00%		A3LWU2              	100.00%
Bootstrap support for A8IRX8 as seed ortholog is 100%.
Bootstrap support for A3LWU2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 S.stipitis:115

A8IIA2              	100.00%		A3M080              	100.00%
Bootstrap support for A8IIA2 as seed ortholog is 100%.
Bootstrap support for A3M080 as seed ortholog is 100%.

Group of orthologs #1119. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:41

A8HMG5              	100.00%		A3GH73              	100.00%
                    	       		A3LS56              	12.85%
                    	       		A3LN43              	10.40%
Bootstrap support for A8HMG5 as seed ortholog is 100%.
Bootstrap support for A3GH73 as seed ortholog is 84%.

Group of orthologs #1120. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:114

A8HW43              	100.00%		A3LSK0              	100.00%
Bootstrap support for A8HW43 as seed ortholog is 100%.
Bootstrap support for A3LSK0 as seed ortholog is 100%.

Group of orthologs #1121. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:114

A8I0Y2              	100.00%		A3LT51              	100.00%
Bootstrap support for A8I0Y2 as seed ortholog is 100%.
Bootstrap support for A3LT51 as seed ortholog is 100%.

Group of orthologs #1122. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:114

A8J8P4              	100.00%		A3GFL2              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for A3GFL2 as seed ortholog is 100%.

Group of orthologs #1123. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 S.stipitis:12

A8IWD2              	100.00%		A3LXB2              	100.00%
Bootstrap support for A8IWD2 as seed ortholog is 81%.
Bootstrap support for A3LXB2 as seed ortholog is 66%.
Alternative seed ortholog is A3LSN6 (12 bits away from this cluster)

Group of orthologs #1124. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:114

A8ITZ0              	100.00%		A3LZ59              	100.00%
Bootstrap support for A8ITZ0 as seed ortholog is 100%.
Bootstrap support for A3LZ59 as seed ortholog is 100%.

Group of orthologs #1125. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 S.stipitis:114

A8J450              	100.00%		A3LSC1              	100.00%
Bootstrap support for A8J450 as seed ortholog is 99%.
Bootstrap support for A3LSC1 as seed ortholog is 100%.

Group of orthologs #1126. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 S.stipitis:114

A8J9T0              	100.00%		A3LZI5              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for A3LZI5 as seed ortholog is 100%.

Group of orthologs #1127. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 S.stipitis:113

A8IYS5              	100.00%		A3LXG9              	100.00%
                    	       		A3LTF2              	23.92%
                    	       		A3LXE1              	23.60%
                    	       		A3M055              	14.19%
                    	       		A3LR71              	9.09%
                    	       		A3LZI1              	6.38%
                    	       		A3LVQ1              	5.26%
Bootstrap support for A8IYS5 as seed ortholog is 100%.
Bootstrap support for A3LXG9 as seed ortholog is 100%.

Group of orthologs #1128. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 S.stipitis:113

A8HYN9              	100.00%		A3LPF4              	100.00%
Bootstrap support for A8HYN9 as seed ortholog is 100%.
Bootstrap support for A3LPF4 as seed ortholog is 100%.

Group of orthologs #1129. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 S.stipitis:113

A8I5L7              	100.00%		A3LTQ1              	100.00%
Bootstrap support for A8I5L7 as seed ortholog is 100%.
Bootstrap support for A3LTQ1 as seed ortholog is 100%.

Group of orthologs #1130. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 S.stipitis:113

A8IWL0              	100.00%		A3LQI3              	100.00%
Bootstrap support for A8IWL0 as seed ortholog is 100%.
Bootstrap support for A3LQI3 as seed ortholog is 100%.

Group of orthologs #1131. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 S.stipitis:113

A8IZ36              	100.00%		A3LVB9              	100.00%
Bootstrap support for A8IZ36 as seed ortholog is 100%.
Bootstrap support for A3LVB9 as seed ortholog is 100%.

Group of orthologs #1132. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:113

P11094              	100.00%		A3LWK9              	100.00%
Bootstrap support for P11094 as seed ortholog is 94%.
Bootstrap support for A3LWK9 as seed ortholog is 100%.

Group of orthologs #1133. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 S.stipitis:112

A8HMZ3              	100.00%		A3LR25              	100.00%
A8J3Y2              	19.23%		
Bootstrap support for A8HMZ3 as seed ortholog is 100%.
Bootstrap support for A3LR25 as seed ortholog is 100%.

Group of orthologs #1134. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 S.stipitis:112

A8HQW1              	100.00%		A3LPA4              	100.00%
                    	       		A3LW67              	100.00%
Bootstrap support for A8HQW1 as seed ortholog is 100%.
Bootstrap support for A3LPA4 as seed ortholog is 100%.
Bootstrap support for A3LW67 as seed ortholog is 100%.

Group of orthologs #1135. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:33

A8HZQ4              	100.00%		A3GGN9              	100.00%
Bootstrap support for A8HZQ4 as seed ortholog is 97%.
Bootstrap support for A3GGN9 as seed ortholog is 87%.

Group of orthologs #1136. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 S.stipitis:112

A8JB59              	100.00%		A3M0C7              	100.00%
Bootstrap support for A8JB59 as seed ortholog is 100%.
Bootstrap support for A3M0C7 as seed ortholog is 100%.

Group of orthologs #1137. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:30

A8HXS9              	100.00%		A3LUA5              	100.00%
                    	       		A3GGR1              	81.97%
Bootstrap support for A8HXS9 as seed ortholog is 96%.
Bootstrap support for A3LUA5 as seed ortholog is 77%.

Group of orthologs #1138. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8J0R4              	100.00%		A3GHH7              	100.00%
                    	       		A3LSH5              	34.74%
Bootstrap support for A8J0R4 as seed ortholog is 100%.
Bootstrap support for A3GHH7 as seed ortholog is 100%.

Group of orthologs #1139. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8JFA9              	100.00%		A3LUW6              	100.00%
                    	       		A3LWU8              	11.99%
Bootstrap support for A8JFA9 as seed ortholog is 100%.
Bootstrap support for A3LUW6 as seed ortholog is 100%.

Group of orthologs #1140. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8HYD5              	100.00%		A3GI53              	100.00%
Bootstrap support for A8HYD5 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #1141. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:111

A8HT22              	100.00%		A3LUI3              	100.00%
Bootstrap support for A8HT22 as seed ortholog is 99%.
Bootstrap support for A3LUI3 as seed ortholog is 100%.

Group of orthologs #1142. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8J2Z8              	100.00%		A3GGK9              	100.00%
Bootstrap support for A8J2Z8 as seed ortholog is 100%.
Bootstrap support for A3GGK9 as seed ortholog is 100%.

Group of orthologs #1143. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8IS57              	100.00%		A3LYM3              	100.00%
Bootstrap support for A8IS57 as seed ortholog is 100%.
Bootstrap support for A3LYM3 as seed ortholog is 100%.

Group of orthologs #1144. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8J5Q8              	100.00%		A3LNY4              	100.00%
Bootstrap support for A8J5Q8 as seed ortholog is 100%.
Bootstrap support for A3LNY4 as seed ortholog is 100%.

Group of orthologs #1145. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 S.stipitis:111

A8J3W4              	100.00%		A3LQL8              	100.00%
Bootstrap support for A8J3W4 as seed ortholog is 86%.
Bootstrap support for A3LQL8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 S.stipitis:111

A8J9L3              	100.00%		A3LXQ2              	100.00%
Bootstrap support for A8J9L3 as seed ortholog is 100%.
Bootstrap support for A3LXQ2 as seed ortholog is 100%.

Group of orthologs #1147. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 S.stipitis:110

A8IF69              	100.00%		A3GF36              	100.00%
                    	       		A3LVV8              	5.36%
                    	       		A3LPW1              	5.26%
Bootstrap support for A8IF69 as seed ortholog is 100%.
Bootstrap support for A3GF36 as seed ortholog is 100%.

Group of orthologs #1148. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 S.stipitis:110

A8J152              	100.00%		A3LUL8              	100.00%
Bootstrap support for A8J152 as seed ortholog is 100%.
Bootstrap support for A3LUL8 as seed ortholog is 100%.

Group of orthologs #1149. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 S.stipitis:110

A8JI10              	100.00%		A3M0I6              	100.00%
Bootstrap support for A8JI10 as seed ortholog is 100%.
Bootstrap support for A3M0I6 as seed ortholog is 100%.

Group of orthologs #1150. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:109

A8HZ87              	100.00%		A3LT60              	100.00%
Bootstrap support for A8HZ87 as seed ortholog is 100%.
Bootstrap support for A3LT60 as seed ortholog is 100%.

Group of orthologs #1151. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:109

A8HSJ9              	100.00%		A3LWW0              	100.00%
Bootstrap support for A8HSJ9 as seed ortholog is 100%.
Bootstrap support for A3LWW0 as seed ortholog is 100%.

Group of orthologs #1152. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:109

A8J342              	100.00%		A3GH16              	100.00%
Bootstrap support for A8J342 as seed ortholog is 100%.
Bootstrap support for A3GH16 as seed ortholog is 100%.

Group of orthologs #1153. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:109

A8IXY0              	100.00%		A3LVT7              	100.00%
Bootstrap support for A8IXY0 as seed ortholog is 100%.
Bootstrap support for A3LVT7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 S.stipitis:109

A8JHQ6              	100.00%		A3LRR2              	100.00%
Bootstrap support for A8JHQ6 as seed ortholog is 100%.
Bootstrap support for A3LRR2 as seed ortholog is 100%.

Group of orthologs #1155. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 S.stipitis:18

A8IS20              	100.00%		P50167              	100.00%
Q84X75              	5.88%		A3GF07              	9.51%
                    	       		A3GF05              	7.96%
Bootstrap support for A8IS20 as seed ortholog is 72%.
Alternative seed ortholog is A8JBX4 (21 bits away from this cluster)
Bootstrap support for P50167 as seed ortholog is 69%.
Alternative seed ortholog is A3LSN6 (18 bits away from this cluster)

Group of orthologs #1156. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:108

A8HTE8              	100.00%		A3LNU7              	100.00%
Bootstrap support for A8HTE8 as seed ortholog is 100%.
Bootstrap support for A3LNU7 as seed ortholog is 100%.

Group of orthologs #1157. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:108

A8HQ58              	100.00%		A3LVG8              	100.00%
Bootstrap support for A8HQ58 as seed ortholog is 100%.
Bootstrap support for A3LVG8 as seed ortholog is 100%.

Group of orthologs #1158. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 S.stipitis:108

A8I0Q1              	100.00%		A3LTV7              	100.00%
Bootstrap support for A8I0Q1 as seed ortholog is 100%.
Bootstrap support for A3LTV7 as seed ortholog is 100%.

Group of orthologs #1159. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:108

A8JH45              	100.00%		A3LN47              	100.00%
Bootstrap support for A8JH45 as seed ortholog is 99%.
Bootstrap support for A3LN47 as seed ortholog is 100%.

Group of orthologs #1160. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:107

A8IG64              	100.00%		A3GG27              	100.00%
Bootstrap support for A8IG64 as seed ortholog is 100%.
Bootstrap support for A3GG27 as seed ortholog is 100%.

Group of orthologs #1161. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:107

A8IJT8              	100.00%		A3LMZ3              	100.00%
Bootstrap support for A8IJT8 as seed ortholog is 100%.
Bootstrap support for A3LMZ3 as seed ortholog is 100%.

Group of orthologs #1162. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:107

A8IJZ6              	100.00%		A3LTE6              	100.00%
Bootstrap support for A8IJZ6 as seed ortholog is 100%.
Bootstrap support for A3LTE6 as seed ortholog is 100%.

Group of orthologs #1163. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:107

A8IY13              	100.00%		A3M090              	100.00%
Bootstrap support for A8IY13 as seed ortholog is 100%.
Bootstrap support for A3M090 as seed ortholog is 100%.

Group of orthologs #1164. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 S.stipitis:107

A8JI94              	100.00%		A3LS82              	100.00%
Bootstrap support for A8JI94 as seed ortholog is 100%.
Bootstrap support for A3LS82 as seed ortholog is 100%.

Group of orthologs #1165. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:106

A8HQC1              	100.00%		A3LZC5              	100.00%
Bootstrap support for A8HQC1 as seed ortholog is 100%.
Bootstrap support for A3LZC5 as seed ortholog is 100%.

Group of orthologs #1166. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:106

A8IZM3              	100.00%		A3LNQ9              	100.00%
Bootstrap support for A8IZM3 as seed ortholog is 100%.
Bootstrap support for A3LNQ9 as seed ortholog is 100%.

Group of orthologs #1167. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:106

A8ITZ3              	100.00%		A3LXP2              	100.00%
Bootstrap support for A8ITZ3 as seed ortholog is 100%.
Bootstrap support for A3LXP2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:106

A8JB53              	100.00%		A3LW92              	100.00%
Bootstrap support for A8JB53 as seed ortholog is 100%.
Bootstrap support for A3LW92 as seed ortholog is 100%.

Group of orthologs #1169. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 S.stipitis:106

A8JET7              	100.00%		A3M0E2              	100.00%
Bootstrap support for A8JET7 as seed ortholog is 100%.
Bootstrap support for A3M0E2 as seed ortholog is 100%.

Group of orthologs #1170. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 S.stipitis:105

A8J206              	100.00%		A3LXE9              	100.00%
Bootstrap support for A8J206 as seed ortholog is 100%.
Bootstrap support for A3LXE9 as seed ortholog is 100%.

Group of orthologs #1171. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 S.stipitis:105

A8JHV0              	100.00%		A3LRG2              	100.00%
Bootstrap support for A8JHV0 as seed ortholog is 100%.
Bootstrap support for A3LRG2 as seed ortholog is 100%.

Group of orthologs #1172. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:104

A8HPH8              	100.00%		A3LQ63              	100.00%
Bootstrap support for A8HPH8 as seed ortholog is 100%.
Bootstrap support for A3LQ63 as seed ortholog is 100%.

Group of orthologs #1173. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:104

A8ICA8              	100.00%		A3GI10              	100.00%
Bootstrap support for A8ICA8 as seed ortholog is 85%.
Bootstrap support for A3GI10 as seed ortholog is 100%.

Group of orthologs #1174. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:104

A8I282              	100.00%		A3LT61              	100.00%
Bootstrap support for A8I282 as seed ortholog is 100%.
Bootstrap support for A3LT61 as seed ortholog is 100%.

Group of orthologs #1175. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 S.stipitis:104

A8J4Q3              	100.00%		A3LTX2              	100.00%
Bootstrap support for A8J4Q3 as seed ortholog is 100%.
Bootstrap support for A3LTX2 as seed ortholog is 100%.

Group of orthologs #1176. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 S.stipitis:104

A8JFK9              	100.00%		A3LYD7              	100.00%
Bootstrap support for A8JFK9 as seed ortholog is 82%.
Bootstrap support for A3LYD7 as seed ortholog is 100%.

Group of orthologs #1177. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8I8Y8              	100.00%		A3GFZ0              	100.00%
Bootstrap support for A8I8Y8 as seed ortholog is 100%.
Bootstrap support for A3GFZ0 as seed ortholog is 100%.

Group of orthologs #1178. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8HPV7              	100.00%		A3LTT1              	100.00%
Bootstrap support for A8HPV7 as seed ortholog is 100%.
Bootstrap support for A3LTT1 as seed ortholog is 100%.

Group of orthologs #1179. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:36

A8IL73              	100.00%		A3LQN5              	100.00%
Bootstrap support for A8IL73 as seed ortholog is 100%.
Bootstrap support for A3LQN5 as seed ortholog is 82%.

Group of orthologs #1180. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8IT26              	100.00%		A3LRQ8              	100.00%
Bootstrap support for A8IT26 as seed ortholog is 100%.
Bootstrap support for A3LRQ8 as seed ortholog is 100%.

Group of orthologs #1181. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8IYR6              	100.00%		A3LQP6              	100.00%
Bootstrap support for A8IYR6 as seed ortholog is 100%.
Bootstrap support for A3LQP6 as seed ortholog is 100%.

Group of orthologs #1182. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8J2V3              	100.00%		A3LMS7              	100.00%
Bootstrap support for A8J2V3 as seed ortholog is 100%.
Bootstrap support for A3LMS7 as seed ortholog is 100%.

Group of orthologs #1183. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8J1A3              	100.00%		A3LS71              	100.00%
Bootstrap support for A8J1A3 as seed ortholog is 100%.
Bootstrap support for A3LS71 as seed ortholog is 100%.

Group of orthologs #1184. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8J266              	100.00%		A3LSB8              	100.00%
Bootstrap support for A8J266 as seed ortholog is 100%.
Bootstrap support for A3LSB8 as seed ortholog is 100%.

Group of orthologs #1185. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 S.stipitis:103

A8JFB7              	100.00%		A3LWB7              	100.00%
Bootstrap support for A8JFB7 as seed ortholog is 100%.
Bootstrap support for A3LWB7 as seed ortholog is 100%.

Group of orthologs #1186. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 S.stipitis:102

A8I0Z1              	100.00%		A3LY46              	100.00%
                    	       		A3LTQ3              	34.93%
                    	       		A3GH40              	13.62%
Bootstrap support for A8I0Z1 as seed ortholog is 100%.
Bootstrap support for A3LY46 as seed ortholog is 100%.

Group of orthologs #1187. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 S.stipitis:102

A7UCH9              	100.00%		A3LZZ4              	100.00%
A8JB12              	46.58%		
Bootstrap support for A7UCH9 as seed ortholog is 87%.
Bootstrap support for A3LZZ4 as seed ortholog is 100%.

Group of orthologs #1188. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 S.stipitis:102

A8HRV5              	100.00%		A3LPV2              	100.00%
Bootstrap support for A8HRV5 as seed ortholog is 100%.
Bootstrap support for A3LPV2 as seed ortholog is 100%.

Group of orthologs #1189. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 S.stipitis:102

A8I6D1              	100.00%		A3LPL5              	100.00%
Bootstrap support for A8I6D1 as seed ortholog is 100%.
Bootstrap support for A3LPL5 as seed ortholog is 100%.

Group of orthologs #1190. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 S.stipitis:102

A8IX94              	100.00%		A3GH43              	100.00%
Bootstrap support for A8IX94 as seed ortholog is 100%.
Bootstrap support for A3GH43 as seed ortholog is 100%.

Group of orthologs #1191. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 S.stipitis:102

A8INB8              	100.00%		A3LZH4              	100.00%
Bootstrap support for A8INB8 as seed ortholog is 100%.
Bootstrap support for A3LZH4 as seed ortholog is 100%.

Group of orthologs #1192. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 S.stipitis:102

A8JEF4              	100.00%		A3M078              	100.00%
Bootstrap support for A8JEF4 as seed ortholog is 100%.
Bootstrap support for A3M078 as seed ortholog is 100%.

Group of orthologs #1193. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 S.stipitis:101

A8IJK3              	100.00%		A3GFM9              	100.00%
Bootstrap support for A8IJK3 as seed ortholog is 100%.
Bootstrap support for A3GFM9 as seed ortholog is 100%.

Group of orthologs #1194. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 S.stipitis:101

A8I707              	100.00%		A3LXD7              	100.00%
Bootstrap support for A8I707 as seed ortholog is 100%.
Bootstrap support for A3LXD7 as seed ortholog is 100%.

Group of orthologs #1195. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 S.stipitis:24

A8HPG8              	100.00%		A3GFW7              	100.00%
Bootstrap support for A8HPG8 as seed ortholog is 96%.
Bootstrap support for A3GFW7 as seed ortholog is 81%.

Group of orthologs #1196. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 S.stipitis:100

A8HSJ0              	100.00%		A3GGI8              	100.00%
Bootstrap support for A8HSJ0 as seed ortholog is 100%.
Bootstrap support for A3GGI8 as seed ortholog is 100%.

Group of orthologs #1197. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:33

A8J2A1              	100.00%		A3M019              	100.00%
Bootstrap support for A8J2A1 as seed ortholog is 87%.
Bootstrap support for A3M019 as seed ortholog is 77%.

Group of orthologs #1198. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 S.stipitis:100

A8J8G5              	100.00%		A3LW41              	100.00%
Bootstrap support for A8J8G5 as seed ortholog is 100%.
Bootstrap support for A3LW41 as seed ortholog is 100%.

Group of orthologs #1199. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 S.stipitis:99

A8IPI7              	100.00%		A3LTW9              	100.00%
                    	       		A3LRN9              	6.68%
                    	       		A3GF73              	6.18%
Bootstrap support for A8IPI7 as seed ortholog is 43%.
Alternative seed ortholog is A8HPR9 (5 bits away from this cluster)
Bootstrap support for A3LTW9 as seed ortholog is 100%.

Group of orthologs #1200. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8JFZ4              	100.00%		A3LUD7              	100.00%
A8JFZ7              	70.60%		
A8IFQ5              	18.96%		
Bootstrap support for A8JFZ4 as seed ortholog is 100%.
Bootstrap support for A3LUD7 as seed ortholog is 100%.

Group of orthologs #1201. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8I8Z4              	100.00%		A3LZH6              	100.00%
A8J987              	8.04%		
Bootstrap support for A8I8Z4 as seed ortholog is 100%.
Bootstrap support for A3LZH6 as seed ortholog is 100%.

Group of orthologs #1202. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8I6W9              	100.00%		A3GFJ8              	100.00%
Bootstrap support for A8I6W9 as seed ortholog is 100%.
Bootstrap support for A3GFJ8 as seed ortholog is 100%.

Group of orthologs #1203. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8HUT2              	100.00%		A3LT37              	100.00%
Bootstrap support for A8HUT2 as seed ortholog is 100%.
Bootstrap support for A3LT37 as seed ortholog is 100%.

Group of orthologs #1204. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8HVZ9              	100.00%		A3LVV3              	100.00%
Bootstrap support for A8HVZ9 as seed ortholog is 100%.
Bootstrap support for A3LVV3 as seed ortholog is 100%.

Group of orthologs #1205. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:50

A8IA96              	100.00%		A3LR64              	100.00%
Bootstrap support for A8IA96 as seed ortholog is 100%.
Bootstrap support for A3LR64 as seed ortholog is 95%.

Group of orthologs #1206. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8I3Q3              	100.00%		A3LU86              	100.00%
Bootstrap support for A8I3Q3 as seed ortholog is 100%.
Bootstrap support for A3LU86 as seed ortholog is 100%.

Group of orthologs #1207. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8IGE5              	100.00%		A3LRV3              	100.00%
Bootstrap support for A8IGE5 as seed ortholog is 100%.
Bootstrap support for A3LRV3 as seed ortholog is 100%.

Group of orthologs #1208. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8IWP9              	100.00%		A3GH29              	100.00%
Bootstrap support for A8IWP9 as seed ortholog is 100%.
Bootstrap support for A3GH29 as seed ortholog is 100%.

Group of orthologs #1209. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8IR87              	100.00%		A3LU02              	100.00%
Bootstrap support for A8IR87 as seed ortholog is 100%.
Bootstrap support for A3LU02 as seed ortholog is 100%.

Group of orthologs #1210. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:99

A8JAW5              	100.00%		A3GFA6              	100.00%
Bootstrap support for A8JAW5 as seed ortholog is 90%.
Bootstrap support for A3GFA6 as seed ortholog is 100%.

Group of orthologs #1211. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:38

A8J2J5              	100.00%		A3LWI2              	100.00%
Bootstrap support for A8J2J5 as seed ortholog is 100%.
Bootstrap support for A3LWI2 as seed ortholog is 80%.

Group of orthologs #1212. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8JFB0              	100.00%		A3GG29              	100.00%
Bootstrap support for A8JFB0 as seed ortholog is 100%.
Bootstrap support for A3GG29 as seed ortholog is 100%.

Group of orthologs #1213. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8JDW7              	100.00%		A3LR02              	100.00%
Bootstrap support for A8JDW7 as seed ortholog is 100%.
Bootstrap support for A3LR02 as seed ortholog is 100%.

Group of orthologs #1214. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8JC18              	100.00%		A3LVA3              	100.00%
Bootstrap support for A8JC18 as seed ortholog is 100%.
Bootstrap support for A3LVA3 as seed ortholog is 100%.

Group of orthologs #1215. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 S.stipitis:99

A8JCX6              	100.00%		A3LXI5              	100.00%
Bootstrap support for A8JCX6 as seed ortholog is 100%.
Bootstrap support for A3LXI5 as seed ortholog is 100%.

Group of orthologs #1216. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:98

A8HXD3              	100.00%		A3LZT7              	100.00%
Bootstrap support for A8HXD3 as seed ortholog is 100%.
Bootstrap support for A3LZT7 as seed ortholog is 100%.

Group of orthologs #1217. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:98

A8IW77              	100.00%		A3GID0              	100.00%
Bootstrap support for A8IW77 as seed ortholog is 100%.
Bootstrap support for A3GID0 as seed ortholog is 100%.

Group of orthologs #1218. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 S.stipitis:98

A8J3U2              	100.00%		A3GF33              	100.00%
Bootstrap support for A8J3U2 as seed ortholog is 92%.
Bootstrap support for A3GF33 as seed ortholog is 100%.

Group of orthologs #1219. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 S.stipitis:98

A8J503              	100.00%		A3GH23              	100.00%
Bootstrap support for A8J503 as seed ortholog is 100%.
Bootstrap support for A3GH23 as seed ortholog is 100%.

Group of orthologs #1220. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:97

A8IQI1              	100.00%		A3LTI5              	100.00%
A8IQH3              	90.82%		A3LVY3              	46.08%
A8IQG4              	88.78%		A3LT17              	39.43%
A8IQ53              	76.87%		A3GG60              	37.53%
A8IQ56              	76.53%		A3LZX7              	37.29%
                    	       		A3LT18              	36.58%
                    	       		A3LT16              	34.68%
Bootstrap support for A8IQI1 as seed ortholog is 100%.
Bootstrap support for A3LTI5 as seed ortholog is 100%.

Group of orthologs #1221. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:97

A8HQ78              	100.00%		A3LRI4              	100.00%
Bootstrap support for A8HQ78 as seed ortholog is 100%.
Bootstrap support for A3LRI4 as seed ortholog is 100%.

Group of orthologs #1222. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 S.stipitis:97

A8HWZ1              	100.00%		A3LR42              	100.00%
Bootstrap support for A8HWZ1 as seed ortholog is 81%.
Bootstrap support for A3LR42 as seed ortholog is 100%.

Group of orthologs #1223. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:97

A8IDN1              	100.00%		A3GGS7              	100.00%
Bootstrap support for A8IDN1 as seed ortholog is 99%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #1224. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:97

A8I0E2              	100.00%		A3LR47              	100.00%
Bootstrap support for A8I0E2 as seed ortholog is 100%.
Bootstrap support for A3LR47 as seed ortholog is 100%.

Group of orthologs #1225. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:97

A8II85              	100.00%		A3GHM1              	100.00%
Bootstrap support for A8II85 as seed ortholog is 100%.
Bootstrap support for A3GHM1 as seed ortholog is 100%.

Group of orthologs #1226. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 S.stipitis:19

A8IQ65              	100.00%		A3LYY7              	100.00%
Bootstrap support for A8IQ65 as seed ortholog is 93%.
Bootstrap support for A3LYY7 as seed ortholog is 75%.

Group of orthologs #1227. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:97

A8J8J3              	100.00%		A3GHN3              	100.00%
Bootstrap support for A8J8J3 as seed ortholog is 100%.
Bootstrap support for A3GHN3 as seed ortholog is 100%.

Group of orthologs #1228. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:24

A8JFP4              	100.00%		A3LQB4              	100.00%
Bootstrap support for A8JFP4 as seed ortholog is 100%.
Bootstrap support for A3LQB4 as seed ortholog is 68%.
Alternative seed ortholog is A3LTG9 (24 bits away from this cluster)

Group of orthologs #1229. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 S.stipitis:97

A8JHU2              	100.00%		A3LRS0              	100.00%
Bootstrap support for A8JHU2 as seed ortholog is 100%.
Bootstrap support for A3LRS0 as seed ortholog is 100%.

Group of orthologs #1230. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 S.stipitis:96

A8I9M1              	100.00%		A3LS16              	100.00%
                    	       		A3LWD6              	21.62%
                    	       		A3LWD5              	21.32%
                    	       		A3GFF7              	19.49%
Bootstrap support for A8I9M1 as seed ortholog is 100%.
Bootstrap support for A3LS16 as seed ortholog is 100%.

Group of orthologs #1231. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 S.stipitis:96

A8IUM9              	100.00%		A3LQW1              	100.00%
Bootstrap support for A8IUM9 as seed ortholog is 100%.
Bootstrap support for A3LQW1 as seed ortholog is 100%.

Group of orthologs #1232. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 S.stipitis:96

A8IC04              	100.00%		A3LY75              	100.00%
Bootstrap support for A8IC04 as seed ortholog is 100%.
Bootstrap support for A3LY75 as seed ortholog is 100%.

Group of orthologs #1233. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 S.stipitis:96

A8IYZ2              	100.00%		A3LUU2              	100.00%
Bootstrap support for A8IYZ2 as seed ortholog is 100%.
Bootstrap support for A3LUU2 as seed ortholog is 100%.

Group of orthologs #1234. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 S.stipitis:96

A8J9A9              	100.00%		A3LVP3              	100.00%
Bootstrap support for A8J9A9 as seed ortholog is 100%.
Bootstrap support for A3LVP3 as seed ortholog is 100%.

Group of orthologs #1235. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 S.stipitis:95

A8J1V6              	100.00%		A3GF45              	100.00%
A8I4L7              	29.35%		A3LXK2              	35.58%
                    	       		A3GH57              	31.45%
                    	       		A3LPL8              	28.40%
                    	       		A3M046              	16.10%
                    	       		A3LRU5              	11.86%
                    	       		A3LN30              	11.75%
Bootstrap support for A8J1V6 as seed ortholog is 100%.
Bootstrap support for A3GF45 as seed ortholog is 100%.

Group of orthologs #1236. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 S.stipitis:95

A8HZZ8              	100.00%		A3LSU6              	100.00%
Bootstrap support for A8HZZ8 as seed ortholog is 100%.
Bootstrap support for A3LSU6 as seed ortholog is 100%.

Group of orthologs #1237. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 S.stipitis:95

A8IDW5              	100.00%		A3LVH4              	100.00%
Bootstrap support for A8IDW5 as seed ortholog is 100%.
Bootstrap support for A3LVH4 as seed ortholog is 100%.

Group of orthologs #1238. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 S.stipitis:95

A8J0N3              	100.00%		A3LWW1              	100.00%
Bootstrap support for A8J0N3 as seed ortholog is 100%.
Bootstrap support for A3LWW1 as seed ortholog is 100%.

Group of orthologs #1239. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:13

A8IPD2              	100.00%		A3LQR2              	100.00%
A8IP24              	45.52%		
A8J2S4              	41.39%		
A8J9D6              	21.46%		
A8JIT4              	16.17%		
Bootstrap support for A8IPD2 as seed ortholog is 100%.
Bootstrap support for A3LQR2 as seed ortholog is 66%.
Alternative seed ortholog is A3GF87 (13 bits away from this cluster)

Group of orthologs #1240. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8IKP1              	100.00%		A3LQP4              	100.00%
                    	       		A3LWA3              	100.00%
Bootstrap support for A8IKP1 as seed ortholog is 100%.
Bootstrap support for A3LQP4 as seed ortholog is 100%.
Bootstrap support for A3LWA3 as seed ortholog is 100%.

Group of orthologs #1241. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8JGE3              	100.00%		A3M0E3              	100.00%
                    	       		A3LX34              	47.00%
Bootstrap support for A8JGE3 as seed ortholog is 100%.
Bootstrap support for A3M0E3 as seed ortholog is 100%.

Group of orthologs #1242. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8HQB6              	100.00%		A3LP27              	100.00%
Bootstrap support for A8HQB6 as seed ortholog is 100%.
Bootstrap support for A3LP27 as seed ortholog is 100%.

Group of orthologs #1243. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8HP50              	100.00%		A3LSU0              	100.00%
Bootstrap support for A8HP50 as seed ortholog is 100%.
Bootstrap support for A3LSU0 as seed ortholog is 100%.

Group of orthologs #1244. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:4

A8I6C7              	100.00%		A3LQ17              	100.00%
Bootstrap support for A8I6C7 as seed ortholog is 100%.
Bootstrap support for A3LQ17 as seed ortholog is 51%.
Alternative seed ortholog is A3LQG0 (4 bits away from this cluster)

Group of orthologs #1245. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8HZM0              	100.00%		A3LUQ7              	100.00%
Bootstrap support for A8HZM0 as seed ortholog is 100%.
Bootstrap support for A3LUQ7 as seed ortholog is 100%.

Group of orthologs #1246. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8HNX3              	100.00%		A3LZR7              	100.00%
Bootstrap support for A8HNX3 as seed ortholog is 100%.
Bootstrap support for A3LZR7 as seed ortholog is 100%.

Group of orthologs #1247. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:94

A8IFM6              	100.00%		A3LVG0              	100.00%
Bootstrap support for A8IFM6 as seed ortholog is 99%.
Bootstrap support for A3LVG0 as seed ortholog is 100%.

Group of orthologs #1248. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8IS54              	100.00%		A3LRT4              	100.00%
Bootstrap support for A8IS54 as seed ortholog is 100%.
Bootstrap support for A3LRT4 as seed ortholog is 100%.

Group of orthologs #1249. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8IU13              	100.00%		A3LT47              	100.00%
Bootstrap support for A8IU13 as seed ortholog is 100%.
Bootstrap support for A3LT47 as seed ortholog is 100%.

Group of orthologs #1250. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8IXF4              	100.00%		A3LRT7              	100.00%
Bootstrap support for A8IXF4 as seed ortholog is 100%.
Bootstrap support for A3LRT7 as seed ortholog is 100%.

Group of orthologs #1251. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8IRU1              	100.00%		A3LWD9              	100.00%
Bootstrap support for A8IRU1 as seed ortholog is 100%.
Bootstrap support for A3LWD9 as seed ortholog is 100%.

Group of orthologs #1252. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8IRC0              	100.00%		A3LX04              	100.00%
Bootstrap support for A8IRC0 as seed ortholog is 100%.
Bootstrap support for A3LX04 as seed ortholog is 100%.

Group of orthologs #1253. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8J237              	100.00%		A3LX45              	100.00%
Bootstrap support for A8J237 as seed ortholog is 100%.
Bootstrap support for A3LX45 as seed ortholog is 100%.

Group of orthologs #1254. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 S.stipitis:94

A8JCP0              	100.00%		A3LN98              	100.00%
Bootstrap support for A8JCP0 as seed ortholog is 100%.
Bootstrap support for A3LN98 as seed ortholog is 100%.

Group of orthologs #1255. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 S.stipitis:94

A8JA79              	100.00%		A3LWB4              	100.00%
Bootstrap support for A8JA79 as seed ortholog is 50%.
Alternative seed ortholog is A8I334 (8 bits away from this cluster)
Bootstrap support for A3LWB4 as seed ortholog is 100%.

Group of orthologs #1256. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 S.stipitis:93

A8IR66              	100.00%		A3LQG7              	100.00%
                    	       		A3LZA6              	13.33%
Bootstrap support for A8IR66 as seed ortholog is 82%.
Bootstrap support for A3LQG7 as seed ortholog is 100%.

Group of orthologs #1257. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:25

A8I3E7              	100.00%		A3LVS6              	100.00%
Bootstrap support for A8I3E7 as seed ortholog is 100%.
Bootstrap support for A3LVS6 as seed ortholog is 59%.
Alternative seed ortholog is A3LPN7 (25 bits away from this cluster)

Group of orthologs #1258. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:93

A8IXT4              	100.00%		A3LPE0              	100.00%
Bootstrap support for A8IXT4 as seed ortholog is 100%.
Bootstrap support for A3LPE0 as seed ortholog is 100%.

Group of orthologs #1259. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:93

A8J426              	100.00%		A3GIE0              	100.00%
Bootstrap support for A8J426 as seed ortholog is 100%.
Bootstrap support for A3GIE0 as seed ortholog is 100%.

Group of orthologs #1260. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:93

A8IYQ2              	100.00%		A3LUU3              	100.00%
Bootstrap support for A8IYQ2 as seed ortholog is 100%.
Bootstrap support for A3LUU3 as seed ortholog is 100%.

Group of orthologs #1261. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:93

A8J807              	100.00%		A3LUI4              	100.00%
Bootstrap support for A8J807 as seed ortholog is 100%.
Bootstrap support for A3LUI4 as seed ortholog is 100%.

Group of orthologs #1262. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 S.stipitis:93

A8JEH2              	100.00%		A3LTZ0              	100.00%
Bootstrap support for A8JEH2 as seed ortholog is 100%.
Bootstrap support for A3LTZ0 as seed ortholog is 100%.

Group of orthologs #1263. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8HN02              	100.00%		A3LUU7              	100.00%
Q7XJ66              	18.51%		A3LQJ4              	15.14%
Q84XW3              	17.50%		
A8JFB4              	15.35%		
Bootstrap support for A8HN02 as seed ortholog is 100%.
Bootstrap support for A3LUU7 as seed ortholog is 100%.

Group of orthologs #1264. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:25

A8HP05              	100.00%		A3LW05              	100.00%
                    	       		A3LW06              	38.88%
                    	       		A3GFL4              	21.25%
Bootstrap support for A8HP05 as seed ortholog is 100%.
Bootstrap support for A3LW05 as seed ortholog is 56%.
Alternative seed ortholog is A3GI39 (25 bits away from this cluster)

Group of orthologs #1265. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:92

A8J3E5              	100.00%		A3LUX6              	100.00%
                    	       		A3LSB6              	46.04%
                    	       		A3LQJ9              	36.07%
Bootstrap support for A8J3E5 as seed ortholog is 94%.
Bootstrap support for A3LUX6 as seed ortholog is 100%.

Group of orthologs #1266. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8JFV5              	100.00%		A3LYI2              	100.00%
A8IAK6              	9.33%		
Bootstrap support for A8JFV5 as seed ortholog is 100%.
Bootstrap support for A3LYI2 as seed ortholog is 100%.

Group of orthologs #1267. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8I4L4              	100.00%		A3LP63              	100.00%
Bootstrap support for A8I4L4 as seed ortholog is 100%.
Bootstrap support for A3LP63 as seed ortholog is 100%.

Group of orthologs #1268. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8ICB0              	100.00%		A3LPD0              	100.00%
Bootstrap support for A8ICB0 as seed ortholog is 100%.
Bootstrap support for A3LPD0 as seed ortholog is 100%.

Group of orthologs #1269. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8I311              	100.00%		A3LUD8              	100.00%
Bootstrap support for A8I311 as seed ortholog is 100%.
Bootstrap support for A3LUD8 as seed ortholog is 100%.

Group of orthologs #1270. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8IDD8              	100.00%		A3LVH5              	100.00%
Bootstrap support for A8IDD8 as seed ortholog is 100%.
Bootstrap support for A3LVH5 as seed ortholog is 100%.

Group of orthologs #1271. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8IHQ2              	100.00%		A3LZK1              	100.00%
Bootstrap support for A8IHQ2 as seed ortholog is 100%.
Bootstrap support for A3LZK1 as seed ortholog is 100%.

Group of orthologs #1272. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8IU79              	100.00%		A3LXR3              	100.00%
Bootstrap support for A8IU79 as seed ortholog is 100%.
Bootstrap support for A3LXR3 as seed ortholog is 100%.

Group of orthologs #1273. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8J3I2              	100.00%		A3LQX9              	100.00%
Bootstrap support for A8J3I2 as seed ortholog is 100%.
Bootstrap support for A3LQX9 as seed ortholog is 100%.

Group of orthologs #1274. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 S.stipitis:92

A8JIE5              	100.00%		A3LSG4              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for A3LSG4 as seed ortholog is 100%.

Group of orthologs #1275. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 S.stipitis:91

A8IJ71              	100.00%		A3GFI1              	100.00%
                    	       		A3M0D5              	16.89%
Bootstrap support for A8IJ71 as seed ortholog is 100%.
Bootstrap support for A3GFI1 as seed ortholog is 100%.

Group of orthologs #1276. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 S.stipitis:91

A8HSI6              	100.00%		A3GFJ3              	100.00%
Bootstrap support for A8HSI6 as seed ortholog is 100%.
Bootstrap support for A3GFJ3 as seed ortholog is 100%.

Group of orthologs #1277. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 S.stipitis:91

A8J051              	100.00%		A3LPB5              	100.00%
Bootstrap support for A8J051 as seed ortholog is 100%.
Bootstrap support for A3LPB5 as seed ortholog is 100%.

Group of orthologs #1278. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 S.stipitis:91

A8IUW8              	100.00%		A3LUA1              	100.00%
Bootstrap support for A8IUW8 as seed ortholog is 100%.
Bootstrap support for A3LUA1 as seed ortholog is 100%.

Group of orthologs #1279. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 S.stipitis:91

A8J9X1              	100.00%		A3GIB3              	100.00%
Bootstrap support for A8J9X1 as seed ortholog is 94%.
Bootstrap support for A3GIB3 as seed ortholog is 100%.

Group of orthologs #1280. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 S.stipitis:3

A8J3I5              	100.00%		A3LYC3              	100.00%
Bootstrap support for A8J3I5 as seed ortholog is 41%.
Alternative seed ortholog is A8ITF1 (8 bits away from this cluster)
Bootstrap support for A3LYC3 as seed ortholog is 51%.
Alternative seed ortholog is O00097 (3 bits away from this cluster)

Group of orthologs #1281. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8J0G9              	100.00%		A3LP69              	100.00%
A8J0I1              	33.45%		
A8J9M6              	27.19%		
A8ITR3              	16.82%		
A8HNR0              	14.94%		
A8JFT7              	14.76%		
A8JFT6              	13.86%		
Bootstrap support for A8J0G9 as seed ortholog is 100%.
Bootstrap support for A3LP69 as seed ortholog is 100%.

Group of orthologs #1282. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8HPF4              	100.00%		A3LXF4              	100.00%
A8I528              	56.82%		
Bootstrap support for A8HPF4 as seed ortholog is 100%.
Bootstrap support for A3LXF4 as seed ortholog is 100%.

Group of orthologs #1283. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 S.stipitis:90

A8J7X1              	100.00%		A3LTI1              	100.00%
A8IM09              	16.71%		
Bootstrap support for A8J7X1 as seed ortholog is 82%.
Bootstrap support for A3LTI1 as seed ortholog is 100%.

Group of orthologs #1284. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8JIF2              	100.00%		A3LZL8              	100.00%
A8HMA7              	8.65%		
Bootstrap support for A8JIF2 as seed ortholog is 100%.
Bootstrap support for A3LZL8 as seed ortholog is 100%.

Group of orthologs #1285. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8I3Q0              	100.00%		A3GGS4              	100.00%
Bootstrap support for A8I3Q0 as seed ortholog is 100%.
Bootstrap support for A3GGS4 as seed ortholog is 100%.

Group of orthologs #1286. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8HMG8              	100.00%		A3LVK7              	100.00%
Bootstrap support for A8HMG8 as seed ortholog is 100%.
Bootstrap support for A3LVK7 as seed ortholog is 100%.

Group of orthologs #1287. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8IYG3              	100.00%		A3GGU8              	100.00%
Bootstrap support for A8IYG3 as seed ortholog is 100%.
Bootstrap support for A3GGU8 as seed ortholog is 100%.

Group of orthologs #1288. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8J216              	100.00%		A3GF04              	100.00%
Bootstrap support for A8J216 as seed ortholog is 100%.
Bootstrap support for A3GF04 as seed ortholog is 100%.

Group of orthologs #1289. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 S.stipitis:90

A8I4R4              	100.00%		A3M098              	100.00%
Bootstrap support for A8I4R4 as seed ortholog is 100%.
Bootstrap support for A3M098 as seed ortholog is 100%.

Group of orthologs #1290. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 S.stipitis:90

A8JG35              	100.00%		A3LNI2              	100.00%
Bootstrap support for A8JG35 as seed ortholog is 80%.
Bootstrap support for A3LNI2 as seed ortholog is 100%.

Group of orthologs #1291. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 S.stipitis:45

A8IP68              	100.00%		A3LW00              	100.00%
A8IYA8              	14.78%		A3LVZ9              	20.06%
A8J3J2              	11.68%		
Bootstrap support for A8IP68 as seed ortholog is 54%.
Alternative seed ortholog is A8J1X1 (5 bits away from this cluster)
Bootstrap support for A3LW00 as seed ortholog is 92%.

Group of orthologs #1292. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 S.stipitis:24

A8HUY7              	100.00%		A3LU22              	100.00%
                    	       		A3GHM2              	50.10%
Bootstrap support for A8HUY7 as seed ortholog is 100%.
Bootstrap support for A3LU22 as seed ortholog is 88%.

Group of orthologs #1293. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 S.stipitis:89

A8IV70              	100.00%		A3GGW1              	100.00%
                    	       		A3M0C8              	7.10%
Bootstrap support for A8IV70 as seed ortholog is 100%.
Bootstrap support for A3GGW1 as seed ortholog is 100%.

Group of orthologs #1294. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 S.stipitis:89

A8J6Z1              	100.00%		A3GG65              	100.00%
Bootstrap support for A8J6Z1 as seed ortholog is 82%.
Bootstrap support for A3GG65 as seed ortholog is 100%.

Group of orthologs #1295. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 S.stipitis:89

A8J173              	100.00%		A3LUL1              	100.00%
Bootstrap support for A8J173 as seed ortholog is 100%.
Bootstrap support for A3LUL1 as seed ortholog is 100%.

Group of orthologs #1296. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:88

A8IC48              	100.00%		A3GFM6              	100.00%
Bootstrap support for A8IC48 as seed ortholog is 100%.
Bootstrap support for A3GFM6 as seed ortholog is 100%.

Group of orthologs #1297. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 S.stipitis:39

A8IR04              	100.00%		A3LNC6              	100.00%
Bootstrap support for A8IR04 as seed ortholog is 96%.
Bootstrap support for A3LNC6 as seed ortholog is 97%.

Group of orthologs #1298. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:88

A8IPU0              	100.00%		A3LPC0              	100.00%
Bootstrap support for A8IPU0 as seed ortholog is 100%.
Bootstrap support for A3LPC0 as seed ortholog is 100%.

Group of orthologs #1299. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:88

A8IWV3              	100.00%		A3LUS9              	100.00%
Bootstrap support for A8IWV3 as seed ortholog is 100%.
Bootstrap support for A3LUS9 as seed ortholog is 100%.

Group of orthologs #1300. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:88

A8IW70              	100.00%		A3LW57              	100.00%
Bootstrap support for A8IW70 as seed ortholog is 100%.
Bootstrap support for A3LW57 as seed ortholog is 100%.

Group of orthologs #1301. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:4

A8JAR5              	100.00%		A3LS68              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for A3LS68 as seed ortholog is 45%.
Alternative seed ortholog is A3LSY4 (4 bits away from this cluster)

Group of orthologs #1302. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 S.stipitis:88

A8JEP8              	100.00%		A3LXT9              	100.00%
Bootstrap support for A8JEP8 as seed ortholog is 100%.
Bootstrap support for A3LXT9 as seed ortholog is 100%.

Group of orthologs #1303. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8ITN3              	100.00%		A3LX23              	100.00%
A8IKH9              	38.21%		
A8HNW2              	35.28%		
A8HNV8              	34.94%		
A8HNV6              	34.77%		
A8J2G0              	32.19%		
A8HPI9              	32.19%		
A8I3L6              	31.84%		
A8HRY6              	30.98%		
A8JDI4              	30.46%		
A8J0R9              	30.29%		
A8JGI3              	30.29%		
A8JGQ5              	29.26%		
A8JGV2              	29.26%		
A8J9Z4              	28.92%		
A8I2W8              	28.92%		
A8JBS1              	25.13%		
A8J0S4              	23.06%		
A8HRJ2              	21.34%		
A8JAU0              	9.29%		
Bootstrap support for A8ITN3 as seed ortholog is 100%.
Bootstrap support for A3LX23 as seed ortholog is 100%.

Group of orthologs #1304. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8J6Q2              	100.00%		A3LPX2              	100.00%
A8J7V2              	10.65%		A3LSZ6              	8.44%
                    	       		A3LXQ7              	7.97%
Bootstrap support for A8J6Q2 as seed ortholog is 100%.
Bootstrap support for A3LPX2 as seed ortholog is 100%.

Group of orthologs #1305. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8JGB5              	100.00%		A3LWJ3              	100.00%
                    	       		A3LNJ5              	17.85%
                    	       		A3GHR3              	16.21%
Bootstrap support for A8JGB5 as seed ortholog is 100%.
Bootstrap support for A3LWJ3 as seed ortholog is 100%.

Group of orthologs #1306. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8HZE6              	100.00%		A3GG90              	100.00%
                    	       		A3LS39              	19.89%
Bootstrap support for A8HZE6 as seed ortholog is 100%.
Bootstrap support for A3GG90 as seed ortholog is 100%.

Group of orthologs #1307. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8I9U6              	100.00%		A3LVG5              	100.00%
                    	       		A3LVJ2              	17.57%
Bootstrap support for A8I9U6 as seed ortholog is 100%.
Bootstrap support for A3LVG5 as seed ortholog is 100%.

Group of orthologs #1308. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:6

A8J5M2              	100.00%		A3GHS5              	100.00%
                    	       		A3LN35              	32.38%
Bootstrap support for A8J5M2 as seed ortholog is 100%.
Bootstrap support for A3GHS5 as seed ortholog is 57%.
Alternative seed ortholog is A3LRA1 (6 bits away from this cluster)

Group of orthologs #1309. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8ITE5              	100.00%		A3GH49              	100.00%
Bootstrap support for A8ITE5 as seed ortholog is 100%.
Bootstrap support for A3GH49 as seed ortholog is 100%.

Group of orthologs #1310. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:87

A8IQT7              	100.00%		A3LQ09              	100.00%
Bootstrap support for A8IQT7 as seed ortholog is 97%.
Bootstrap support for A3LQ09 as seed ortholog is 100%.

Group of orthologs #1311. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8J1Q3              	100.00%		A3LQI9              	100.00%
Bootstrap support for A8J1Q3 as seed ortholog is 100%.
Bootstrap support for A3LQI9 as seed ortholog is 100%.

Group of orthologs #1312. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8ITI4              	100.00%		A3LXF7              	100.00%
Bootstrap support for A8ITI4 as seed ortholog is 100%.
Bootstrap support for A3LXF7 as seed ortholog is 100%.

Group of orthologs #1313. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8IYY1              	100.00%		A3LUB2              	100.00%
Bootstrap support for A8IYY1 as seed ortholog is 100%.
Bootstrap support for A3LUB2 as seed ortholog is 100%.

Group of orthologs #1314. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8JBX6              	100.00%		A3GHR2              	100.00%
Bootstrap support for A8JBX6 as seed ortholog is 100%.
Bootstrap support for A3GHR2 as seed ortholog is 100%.

Group of orthologs #1315. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 S.stipitis:87

A8J3R5              	100.00%		A3LZ68              	100.00%
Bootstrap support for A8J3R5 as seed ortholog is 100%.
Bootstrap support for A3LZ68 as seed ortholog is 100%.

Group of orthologs #1316. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:86

A8HNB7              	100.00%		A3LSE7              	100.00%
Bootstrap support for A8HNB7 as seed ortholog is 100%.
Bootstrap support for A3LSE7 as seed ortholog is 100%.

Group of orthologs #1317. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:86

A8HQ72              	100.00%		A3M0K2              	100.00%
Bootstrap support for A8HQ72 as seed ortholog is 100%.
Bootstrap support for A3M0K2 as seed ortholog is 100%.

Group of orthologs #1318. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:31

A8I645              	100.00%		A3LUV5              	100.00%
Bootstrap support for A8I645 as seed ortholog is 100%.
Bootstrap support for A3LUV5 as seed ortholog is 82%.

Group of orthologs #1319. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:86

A8IAZ4              	100.00%		A3LYW4              	100.00%
Bootstrap support for A8IAZ4 as seed ortholog is 100%.
Bootstrap support for A3LYW4 as seed ortholog is 100%.

Group of orthologs #1320. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:86

A8IZX1              	100.00%		A3LTY3              	100.00%
Bootstrap support for A8IZX1 as seed ortholog is 100%.
Bootstrap support for A3LTY3 as seed ortholog is 100%.

Group of orthologs #1321. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 S.stipitis:86

A8JFR8              	100.00%		A3LVK8              	100.00%
Bootstrap support for A8JFR8 as seed ortholog is 100%.
Bootstrap support for A3LVK8 as seed ortholog is 100%.

Group of orthologs #1322. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 S.stipitis:85

A8J4G2              	100.00%		A3LSM8              	100.00%
                    	       		A3LSM9              	18.54%
Bootstrap support for A8J4G2 as seed ortholog is 100%.
Bootstrap support for A3LSM8 as seed ortholog is 100%.

Group of orthologs #1323. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 S.stipitis:85

A8IGC6              	100.00%		A3LVC5              	100.00%
Bootstrap support for A8IGC6 as seed ortholog is 100%.
Bootstrap support for A3LVC5 as seed ortholog is 100%.

Group of orthologs #1324. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 S.stipitis:85

A8J1K4              	100.00%		A3LNS5              	100.00%
Bootstrap support for A8J1K4 as seed ortholog is 100%.
Bootstrap support for A3LNS5 as seed ortholog is 100%.

Group of orthologs #1325. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 S.stipitis:85

A8J0W3              	100.00%		A3LRS5              	100.00%
Bootstrap support for A8J0W3 as seed ortholog is 100%.
Bootstrap support for A3LRS5 as seed ortholog is 100%.

Group of orthologs #1326. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 S.stipitis:85

A8J9C0              	100.00%		A3LT21              	100.00%
Bootstrap support for A8J9C0 as seed ortholog is 100%.
Bootstrap support for A3LT21 as seed ortholog is 100%.

Group of orthologs #1327. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 S.stipitis:85

A8J834              	100.00%		A3LVF3              	100.00%
Bootstrap support for A8J834 as seed ortholog is 97%.
Bootstrap support for A3LVF3 as seed ortholog is 100%.

Group of orthologs #1328. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 S.stipitis:84

A8HWZ6              	100.00%		A3GFG6              	100.00%
Bootstrap support for A8HWZ6 as seed ortholog is 100%.
Bootstrap support for A3GFG6 as seed ortholog is 100%.

Group of orthologs #1329. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 S.stipitis:84

A8I8Z1              	100.00%		A3GFV7              	100.00%
Bootstrap support for A8I8Z1 as seed ortholog is 100%.
Bootstrap support for A3GFV7 as seed ortholog is 100%.

Group of orthologs #1330. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 S.stipitis:84

A8J935              	100.00%		A3LWR6              	100.00%
Bootstrap support for A8J935 as seed ortholog is 57%.
Alternative seed ortholog is A8HMY0 (2 bits away from this cluster)
Bootstrap support for A3LWR6 as seed ortholog is 100%.

Group of orthologs #1331. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 S.stipitis:84

A8J8A6              	100.00%		A3LZ07              	100.00%
Bootstrap support for A8J8A6 as seed ortholog is 100%.
Bootstrap support for A3LZ07 as seed ortholog is 100%.

Group of orthologs #1332. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:83

A8J652              	100.00%		A3GI87              	100.00%
                    	       		A3LR31              	14.51%
                    	       		A3LQ75              	9.79%
Bootstrap support for A8J652 as seed ortholog is 100%.
Bootstrap support for A3GI87 as seed ortholog is 100%.

Group of orthologs #1333. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:10

A8JHH4              	100.00%		A3LTK7              	100.00%
A8JHH3              	39.78%		A3LTK6              	40.05%
Bootstrap support for A8JHH4 as seed ortholog is 100%.
Bootstrap support for A3LTK7 as seed ortholog is 60%.
Alternative seed ortholog is A3LTU5 (10 bits away from this cluster)

Group of orthologs #1334. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 S.stipitis:83

A8IYP5              	100.00%		A3GG43              	100.00%
                    	       		A3LUN7              	26.97%
Bootstrap support for A8IYP5 as seed ortholog is 65%.
Alternative seed ortholog is A8HP58 (9 bits away from this cluster)
Bootstrap support for A3GG43 as seed ortholog is 100%.

Group of orthologs #1335. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:83

A8JCC6              	100.00%		A3LX37              	100.00%
                    	       		A3LPG9              	40.16%
Bootstrap support for A8JCC6 as seed ortholog is 100%.
Bootstrap support for A3LX37 as seed ortholog is 100%.

Group of orthologs #1336. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:83

A8HRP7              	100.00%		A3LX93              	100.00%
Bootstrap support for A8HRP7 as seed ortholog is 100%.
Bootstrap support for A3LX93 as seed ortholog is 100%.

Group of orthologs #1337. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 S.stipitis:3

Q6UKY4              	100.00%		A3GFR3              	100.00%
Bootstrap support for Q6UKY4 as seed ortholog is 100%.
Bootstrap support for A3GFR3 as seed ortholog is 56%.
Alternative seed ortholog is A3LUI7 (3 bits away from this cluster)

Group of orthologs #1338. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8IYH1              	100.00%		A3LWC8              	100.00%
A8JHA9              	53.44%		A3GFD7              	14.89%
Bootstrap support for A8IYH1 as seed ortholog is 100%.
Bootstrap support for A3LWC8 as seed ortholog is 100%.

Group of orthologs #1339. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8JH36              	100.00%		A3GI44              	100.00%
A8IMF2              	6.67%		
Bootstrap support for A8JH36 as seed ortholog is 100%.
Bootstrap support for A3GI44 as seed ortholog is 100%.

Group of orthologs #1340. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

Q5VLJ9              	100.00%		A3LQY2              	100.00%
A8IR22              	9.54%		
Bootstrap support for Q5VLJ9 as seed ortholog is 100%.
Bootstrap support for A3LQY2 as seed ortholog is 100%.

Group of orthologs #1341. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8HPU0              	100.00%		A3GGG2              	100.00%
Bootstrap support for A8HPU0 as seed ortholog is 100%.
Bootstrap support for A3GGG2 as seed ortholog is 100%.

Group of orthologs #1342. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:38

A8I137              	100.00%		A3GFD4              	100.00%
Bootstrap support for A8I137 as seed ortholog is 100%.
Bootstrap support for A3GFD4 as seed ortholog is 91%.

Group of orthologs #1343. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8I826              	100.00%		A3LZ82              	100.00%
Bootstrap support for A8I826 as seed ortholog is 100%.
Bootstrap support for A3LZ82 as seed ortholog is 100%.

Group of orthologs #1344. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8J3R6              	100.00%		A3LU01              	100.00%
Bootstrap support for A8J3R6 as seed ortholog is 100%.
Bootstrap support for A3LU01 as seed ortholog is 100%.

Group of orthologs #1345. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8J2K2              	100.00%		A3LW62              	100.00%
Bootstrap support for A8J2K2 as seed ortholog is 100%.
Bootstrap support for A3LW62 as seed ortholog is 100%.

Group of orthologs #1346. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 S.stipitis:82

Q84XS0              	100.00%		A3GI91              	100.00%
Bootstrap support for Q84XS0 as seed ortholog is 56%.
Alternative seed ortholog is A8HP58 (3 bits away from this cluster)
Bootstrap support for A3GI91 as seed ortholog is 100%.

Group of orthologs #1347. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

A8JF66              	100.00%		A3M0C5              	100.00%
Bootstrap support for A8JF66 as seed ortholog is 100%.
Bootstrap support for A3M0C5 as seed ortholog is 100%.

Group of orthologs #1348. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 S.stipitis:82

Q8HTL1              	100.00%		A3LYH4              	100.00%
Bootstrap support for Q8HTL1 as seed ortholog is 100%.
Bootstrap support for A3LYH4 as seed ortholog is 100%.

Group of orthologs #1349. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:35

A8IE61              	100.00%		A3LPX1              	100.00%
Bootstrap support for A8IE61 as seed ortholog is 100%.
Bootstrap support for A3LPX1 as seed ortholog is 84%.

Group of orthologs #1350. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:81

A8I7X3              	100.00%		A3LY76              	100.00%
Bootstrap support for A8I7X3 as seed ortholog is 100%.
Bootstrap support for A3LY76 as seed ortholog is 100%.

Group of orthologs #1351. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 S.stipitis:81

A8JA11              	100.00%		A3LRE6              	100.00%
Bootstrap support for A8JA11 as seed ortholog is 91%.
Bootstrap support for A3LRE6 as seed ortholog is 100%.

Group of orthologs #1352. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 S.stipitis:14

A8JBU3              	100.00%		A3LQE7              	100.00%
Bootstrap support for A8JBU3 as seed ortholog is 100%.
Bootstrap support for A3LQE7 as seed ortholog is 59%.
Alternative seed ortholog is A3M0A6 (14 bits away from this cluster)

Group of orthologs #1353. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 S.stipitis:81

A8J937              	100.00%		A3LWS7              	100.00%
Bootstrap support for A8J937 as seed ortholog is 68%.
Alternative seed ortholog is A8J9Z5 (15 bits away from this cluster)
Bootstrap support for A3LWS7 as seed ortholog is 100%.

Group of orthologs #1354. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:80

A8HP70              	100.00%		A3LXH3              	100.00%
A8J3K9              	8.79%		
Bootstrap support for A8HP70 as seed ortholog is 100%.
Bootstrap support for A3LXH3 as seed ortholog is 100%.

Group of orthologs #1355. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:80

A8HM66              	100.00%		A3LZI3              	100.00%
Bootstrap support for A8HM66 as seed ortholog is 100%.
Bootstrap support for A3LZI3 as seed ortholog is 100%.

Group of orthologs #1356. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:80

A8IXG3              	100.00%		A3GFI2              	100.00%
Bootstrap support for A8IXG3 as seed ortholog is 100%.
Bootstrap support for A3GFI2 as seed ortholog is 100%.

Group of orthologs #1357. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:80

A8IA47              	100.00%		A3LVS3              	100.00%
Bootstrap support for A8IA47 as seed ortholog is 100%.
Bootstrap support for A3LVS3 as seed ortholog is 100%.

Group of orthologs #1358. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:80

A8J775              	100.00%		A3GGA1              	100.00%
Bootstrap support for A8J775 as seed ortholog is 100%.
Bootstrap support for A3GGA1 as seed ortholog is 100%.

Group of orthologs #1359. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 S.stipitis:80

A8JHW6              	100.00%		A3LT34              	100.00%
Bootstrap support for A8JHW6 as seed ortholog is 100%.
Bootstrap support for A3LT34 as seed ortholog is 100%.

Group of orthologs #1360. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:14

A8IHE7              	100.00%		A3LWY1              	100.00%
A8HMJ8              	20.74%		A3LNX9              	48.80%
                    	       		A3GF84              	47.12%
                    	       		A3LZA0              	44.37%
                    	       		A3LVM7              	40.91%
                    	       		A3LVE5              	39.49%
                    	       		A3GHU4              	36.91%
                    	       		A3LNV7              	34.61%
                    	       		A3LUT5              	30.79%
                    	       		A3GGY0              	29.37%
                    	       		A3LRB7              	23.25%
                    	       		A3LS65              	23.16%
                    	       		A3GGS5              	22.45%
                    	       		A3LUX3              	22.36%
                    	       		A3LPC8              	19.34%
                    	       		A3LQF6              	19.17%
                    	       		A3GFQ1              	18.63%
                    	       		A3GFL8              	16.68%
                    	       		A3LSN9              	15.97%
                    	       		A3GET0              	14.73%
                    	       		A3GG77              	14.55%
                    	       		A3LRB6              	14.46%
                    	       		A3M039              	12.69%
                    	       		A3LUI5              	12.42%
Bootstrap support for A8IHE7 as seed ortholog is 100%.
Bootstrap support for A3LWY1 as seed ortholog is 59%.
Alternative seed ortholog is A3GHP8 (14 bits away from this cluster)

Group of orthologs #1361. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 S.stipitis:20

A8HVM9              	100.00%		A3LY79              	100.00%
                    	       		A3GHM8              	16.37%
                    	       		A3LSD5              	15.82%
                    	       		A3LQQ4              	15.15%
                    	       		A3GFC9              	14.93%
                    	       		A3GFF6              	14.38%
                    	       		A3LUN6              	14.38%
                    	       		A3LYK3              	14.16%
                    	       		A3GIC4              	11.84%
                    	       		A3LPQ5              	11.28%
                    	       		A3LQZ9              	10.40%
                    	       		A3M0N4              	10.18%
                    	       		F2Z662              	7.96%
                    	       		A3GIE8              	7.63%
                    	       		A3LRJ4              	7.52%
Bootstrap support for A8HVM9 as seed ortholog is 60%.
Alternative seed ortholog is A8J114 (21 bits away from this cluster)
Bootstrap support for A3LY79 as seed ortholog is 63%.
Alternative seed ortholog is A3LYN2 (20 bits away from this cluster)

Group of orthologs #1362. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:79

A8IZB3              	100.00%		A3LTL2              	100.00%
A8JFV4              	29.11%		
Bootstrap support for A8IZB3 as seed ortholog is 100%.
Bootstrap support for A3LTL2 as seed ortholog is 100%.

Group of orthologs #1363. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:79

A8J5R2              	100.00%		A3GFT9              	100.00%
Bootstrap support for A8J5R2 as seed ortholog is 100%.
Bootstrap support for A3GFT9 as seed ortholog is 100%.

Group of orthologs #1364. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 S.stipitis:2

A8J8L3              	100.00%		A3LSC2              	100.00%
Bootstrap support for A8J8L3 as seed ortholog is 82%.
Bootstrap support for A3LSC2 as seed ortholog is 62%.
Alternative seed ortholog is A3LU39 (2 bits away from this cluster)

Group of orthologs #1365. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 S.stipitis:79

A8J8R7              	100.00%		A3LYZ0              	100.00%
Bootstrap support for A8J8R7 as seed ortholog is 98%.
Bootstrap support for A3LYZ0 as seed ortholog is 100%.

Group of orthologs #1366. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:79

A8JHU3              	100.00%		A3LQW8              	100.00%
Bootstrap support for A8JHU3 as seed ortholog is 100%.
Bootstrap support for A3LQW8 as seed ortholog is 100%.

Group of orthologs #1367. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 S.stipitis:79

A8JH11              	100.00%		A3LXV2              	100.00%
Bootstrap support for A8JH11 as seed ortholog is 100%.
Bootstrap support for A3LXV2 as seed ortholog is 100%.

Group of orthologs #1368. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:15

A8HSH5              	100.00%		A3M099              	100.00%
A8HMQ5              	16.78%		
Bootstrap support for A8HSH5 as seed ortholog is 100%.
Bootstrap support for A3M099 as seed ortholog is 74%.
Alternative seed ortholog is A3LW42 (15 bits away from this cluster)

Group of orthologs #1369. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:78

A8J2A9              	100.00%		A3LXC1              	100.00%
                    	       		A3LSK8              	63.98%
Bootstrap support for A8J2A9 as seed ortholog is 100%.
Bootstrap support for A3LXC1 as seed ortholog is 100%.

Group of orthologs #1370. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:78

A8HPJ7              	100.00%		A3GFV4              	100.00%
Bootstrap support for A8HPJ7 as seed ortholog is 100%.
Bootstrap support for A3GFV4 as seed ortholog is 100%.

Group of orthologs #1371. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:78

A8IEY8              	100.00%		A3GFY4              	100.00%
Bootstrap support for A8IEY8 as seed ortholog is 100%.
Bootstrap support for A3GFY4 as seed ortholog is 100%.

Group of orthologs #1372. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:78

A8IRB6              	100.00%		A3LR88              	100.00%
Bootstrap support for A8IRB6 as seed ortholog is 100%.
Bootstrap support for A3LR88 as seed ortholog is 100%.

Group of orthologs #1373. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 S.stipitis:78

A8I946              	100.00%		A3LXR6              	100.00%
Bootstrap support for A8I946 as seed ortholog is 100%.
Bootstrap support for A3LXR6 as seed ortholog is 100%.

Group of orthologs #1374. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:77

A8HM72              	100.00%		A3GHC5              	100.00%
Bootstrap support for A8HM72 as seed ortholog is 100%.
Bootstrap support for A3GHC5 as seed ortholog is 100%.

Group of orthologs #1375. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:77

A8HMP3              	100.00%		A3LZ74              	100.00%
Bootstrap support for A8HMP3 as seed ortholog is 100%.
Bootstrap support for A3LZ74 as seed ortholog is 100%.

Group of orthologs #1376. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:19

A8I1B6              	100.00%		A3LV83              	100.00%
Bootstrap support for A8I1B6 as seed ortholog is 100%.
Bootstrap support for A3LV83 as seed ortholog is 71%.
Alternative seed ortholog is A3LRA1 (19 bits away from this cluster)

Group of orthologs #1377. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 S.stipitis:77

A8IKM0              	100.00%		A3LNF0              	100.00%
Bootstrap support for A8IKM0 as seed ortholog is 71%.
Alternative seed ortholog is A8J7Z7 (18 bits away from this cluster)
Bootstrap support for A3LNF0 as seed ortholog is 100%.

Group of orthologs #1378. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:22

A8J0E8              	100.00%		A3LSX1              	100.00%
Bootstrap support for A8J0E8 as seed ortholog is 100%.
Bootstrap support for A3LSX1 as seed ortholog is 80%.

Group of orthologs #1379. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:77

A8IYR0              	100.00%		A3M043              	100.00%
Bootstrap support for A8IYR0 as seed ortholog is 100%.
Bootstrap support for A3M043 as seed ortholog is 100%.

Group of orthologs #1380. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 S.stipitis:25

A8J0N9              	100.00%		A3LYJ5              	100.00%
Bootstrap support for A8J0N9 as seed ortholog is 74%.
Alternative seed ortholog is A8IBI1 (21 bits away from this cluster)
Bootstrap support for A3LYJ5 as seed ortholog is 80%.

Group of orthologs #1381. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 S.stipitis:77

A8JHX7              	100.00%		A3LRJ2              	100.00%
Bootstrap support for A8JHX7 as seed ortholog is 100%.
Bootstrap support for A3LRJ2 as seed ortholog is 100%.

Group of orthologs #1382. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 S.stipitis:76

A8IUC0              	100.00%		A3LV73              	100.00%
A8HQP6              	13.75%		A3LV64              	22.98%
A8JHG3              	7.81%		
Bootstrap support for A8IUC0 as seed ortholog is 87%.
Bootstrap support for A3LV73 as seed ortholog is 100%.

Group of orthologs #1383. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8J3A7              	100.00%		A3LNK8              	100.00%
A8J3A8              	100.00%		
A8JD89              	5.93%		
A8JD90              	5.83%		
Bootstrap support for A8J3A7 as seed ortholog is 100%.
Bootstrap support for A8J3A8 as seed ortholog is 100%.
Bootstrap support for A3LNK8 as seed ortholog is 100%.

Group of orthologs #1384. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8IQE3              	100.00%		A3GHT8              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for A3GHT8 as seed ortholog is 100%.

Group of orthologs #1385. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8I388              	100.00%		A3LWH8              	100.00%
Bootstrap support for A8I388 as seed ortholog is 100%.
Bootstrap support for A3LWH8 as seed ortholog is 100%.

Group of orthologs #1386. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8IX67              	100.00%		A3GFN8              	100.00%
Bootstrap support for A8IX67 as seed ortholog is 100%.
Bootstrap support for A3GFN8 as seed ortholog is 100%.

Group of orthologs #1387. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8IDS5              	100.00%		A3LTT9              	100.00%
Bootstrap support for A8IDS5 as seed ortholog is 100%.
Bootstrap support for A3LTT9 as seed ortholog is 100%.

Group of orthologs #1388. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8HXC5              	100.00%		A3LZW3              	100.00%
Bootstrap support for A8HXC5 as seed ortholog is 100%.
Bootstrap support for A3LZW3 as seed ortholog is 100%.

Group of orthologs #1389. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8J6H4              	100.00%		A3LN96              	100.00%
Bootstrap support for A8J6H4 as seed ortholog is 100%.
Bootstrap support for A3LN96 as seed ortholog is 100%.

Group of orthologs #1390. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 S.stipitis:76

A8J8W6              	100.00%		A3GGU4              	100.00%
Bootstrap support for A8J8W6 as seed ortholog is 100%.
Bootstrap support for A3GGU4 as seed ortholog is 100%.

Group of orthologs #1391. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8HV34              	100.00%		A3GH12              	100.00%
                    	       		A3GFA1              	23.06%
Bootstrap support for A8HV34 as seed ortholog is 100%.
Bootstrap support for A3GH12 as seed ortholog is 100%.

Group of orthologs #1392. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8IVD9              	100.00%		A3LTP1              	100.00%
                    	       		A3GGK4              	19.54%
Bootstrap support for A8IVD9 as seed ortholog is 100%.
Bootstrap support for A3LTP1 as seed ortholog is 100%.

Group of orthologs #1393. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8IZY5              	100.00%		A3LU35              	100.00%
                    	       		A3LU36              	23.64%
Bootstrap support for A8IZY5 as seed ortholog is 100%.
Bootstrap support for A3LU35 as seed ortholog is 100%.

Group of orthologs #1394. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8HPR4              	100.00%		A3GHG7              	100.00%
Bootstrap support for A8HPR4 as seed ortholog is 100%.
Bootstrap support for A3GHG7 as seed ortholog is 100%.

Group of orthologs #1395. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8HW82              	100.00%		A3GGY4              	100.00%
Bootstrap support for A8HW82 as seed ortholog is 100%.
Bootstrap support for A3GGY4 as seed ortholog is 100%.

Group of orthologs #1396. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8HPP5              	100.00%		A3LYE7              	100.00%
Bootstrap support for A8HPP5 as seed ortholog is 100%.
Bootstrap support for A3LYE7 as seed ortholog is 100%.

Group of orthologs #1397. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8I408              	100.00%		A3LVA5              	100.00%
Bootstrap support for A8I408 as seed ortholog is 100%.
Bootstrap support for A3LVA5 as seed ortholog is 100%.

Group of orthologs #1398. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8I4Y6              	100.00%		A3LYC8              	100.00%
Bootstrap support for A8I4Y6 as seed ortholog is 100%.
Bootstrap support for A3LYC8 as seed ortholog is 100%.

Group of orthologs #1399. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8IJY1              	100.00%		A3LYD6              	100.00%
Bootstrap support for A8IJY1 as seed ortholog is 100%.
Bootstrap support for A3LYD6 as seed ortholog is 100%.

Group of orthologs #1400. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8JB48              	100.00%		A3GFL1              	100.00%
Bootstrap support for A8JB48 as seed ortholog is 100%.
Bootstrap support for A3GFL1 as seed ortholog is 100%.

Group of orthologs #1401. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 S.stipitis:74

A8JGS4              	100.00%		A3LSE8              	100.00%
Bootstrap support for A8JGS4 as seed ortholog is 100%.
Bootstrap support for A3LSE8 as seed ortholog is 100%.

Group of orthologs #1402. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 S.stipitis:73

A8J924              	100.00%		A3LMW5              	100.00%
A8IT75              	22.69%		
A8IT48              	15.41%		
A8IT73              	8.40%		
A8IT49              	8.12%		
Bootstrap support for A8J924 as seed ortholog is 100%.
Bootstrap support for A3LMW5 as seed ortholog is 100%.

Group of orthologs #1403. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 S.stipitis:73

A8HQ80              	100.00%		A3LNF8              	100.00%
A8J7N6              	6.63%		
Bootstrap support for A8HQ80 as seed ortholog is 57%.
Alternative seed ortholog is A8I2F3 (8 bits away from this cluster)
Bootstrap support for A3LNF8 as seed ortholog is 100%.

Group of orthologs #1404. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 S.stipitis:73

A8HNA4              	100.00%		A3LYC1              	100.00%
Bootstrap support for A8HNA4 as seed ortholog is 100%.
Bootstrap support for A3LYC1 as seed ortholog is 100%.

Group of orthologs #1405. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 S.stipitis:73

A8HQ97              	100.00%		A3M036              	100.00%
Bootstrap support for A8HQ97 as seed ortholog is 100%.
Bootstrap support for A3M036 as seed ortholog is 100%.

Group of orthologs #1406. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 S.stipitis:73

A8J1D5              	100.00%		A3GHS6              	100.00%
Bootstrap support for A8J1D5 as seed ortholog is 100%.
Bootstrap support for A3GHS6 as seed ortholog is 100%.

Group of orthologs #1407. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 S.stipitis:72

A8J2S6              	100.00%		A3LR28              	100.00%
                    	       		A3LNK1              	7.41%
                    	       		A3LVN1              	7.41%
                    	       		A3LUB0              	6.39%
Bootstrap support for A8J2S6 as seed ortholog is 55%.
Alternative seed ortholog is A8HM52 (17 bits away from this cluster)
Bootstrap support for A3LR28 as seed ortholog is 100%.

Group of orthologs #1408. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:8

A8HXE1              	100.00%		A3LP91              	100.00%
A8J778              	19.52%		
Bootstrap support for A8HXE1 as seed ortholog is 100%.
Bootstrap support for A3LP91 as seed ortholog is 69%.
Alternative seed ortholog is A3LZY5 (8 bits away from this cluster)

Group of orthologs #1409. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 S.stipitis:72

A8IXR0              	100.00%		A3LTP6              	100.00%
A8IXR2              	27.92%		
Bootstrap support for A8IXR0 as seed ortholog is 93%.
Bootstrap support for A3LTP6 as seed ortholog is 100%.

Group of orthologs #1410. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8IRR2              	100.00%		A3M0N1              	100.00%
A8IRR3              	64.75%		
Bootstrap support for A8IRR2 as seed ortholog is 100%.
Bootstrap support for A3M0N1 as seed ortholog is 100%.

Group of orthologs #1411. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8HN46              	100.00%		A3LVS5              	100.00%
Bootstrap support for A8HN46 as seed ortholog is 100%.
Bootstrap support for A3LVS5 as seed ortholog is 100%.

Group of orthologs #1412. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:29

A8IA56              	100.00%		A3LPP1              	100.00%
Bootstrap support for A8IA56 as seed ortholog is 100%.
Bootstrap support for A3LPP1 as seed ortholog is 85%.

Group of orthologs #1413. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8HQS2              	100.00%		A3LY65              	100.00%
Bootstrap support for A8HQS2 as seed ortholog is 100%.
Bootstrap support for A3LY65 as seed ortholog is 100%.

Group of orthologs #1414. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8IIY3              	100.00%		A3LRN5              	100.00%
Bootstrap support for A8IIY3 as seed ortholog is 100%.
Bootstrap support for A3LRN5 as seed ortholog is 100%.

Group of orthologs #1415. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8IUP0              	100.00%		A3LQB8              	100.00%
Bootstrap support for A8IUP0 as seed ortholog is 100%.
Bootstrap support for A3LQB8 as seed ortholog is 100%.

Group of orthologs #1416. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8J3E1              	100.00%		A3GF37              	100.00%
Bootstrap support for A8J3E1 as seed ortholog is 100%.
Bootstrap support for A3GF37 as seed ortholog is 100%.

Group of orthologs #1417. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8J213              	100.00%		A3LPH8              	100.00%
Bootstrap support for A8J213 as seed ortholog is 100%.
Bootstrap support for A3LPH8 as seed ortholog is 100%.

Group of orthologs #1418. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8IUG4              	100.00%		A3LVY0              	100.00%
Bootstrap support for A8IUG4 as seed ortholog is 100%.
Bootstrap support for A3LVY0 as seed ortholog is 100%.

Group of orthologs #1419. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8J7X4              	100.00%		A3LP95              	100.00%
Bootstrap support for A8J7X4 as seed ortholog is 100%.
Bootstrap support for A3LP95 as seed ortholog is 100%.

Group of orthologs #1420. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8J2V4              	100.00%		A3LWP7              	100.00%
Bootstrap support for A8J2V4 as seed ortholog is 100%.
Bootstrap support for A3LWP7 as seed ortholog is 100%.

Group of orthologs #1421. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 S.stipitis:72

A8J4I9              	100.00%		A3LWG6              	100.00%
Bootstrap support for A8J4I9 as seed ortholog is 100%.
Bootstrap support for A3LWG6 as seed ortholog is 100%.

Group of orthologs #1422. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 S.stipitis:72

A8JHR3              	100.00%		A3LZB9              	100.00%
Bootstrap support for A8JHR3 as seed ortholog is 68%.
Alternative seed ortholog is A8JC37 (20 bits away from this cluster)
Bootstrap support for A3LZB9 as seed ortholog is 100%.

Group of orthologs #1423. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 S.stipitis:71

A8J252              	100.00%		A3LR35              	100.00%
A8IJK6              	14.09%		
A8J215              	12.07%		
Bootstrap support for A8J252 as seed ortholog is 68%.
Alternative seed ortholog is A8J093 (21 bits away from this cluster)
Bootstrap support for A3LR35 as seed ortholog is 100%.

Group of orthologs #1424. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 S.stipitis:71

A8HS11              	100.00%		A3LN27              	100.00%
Bootstrap support for A8HS11 as seed ortholog is 100%.
Bootstrap support for A3LN27 as seed ortholog is 100%.

Group of orthologs #1425. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 S.stipitis:10

A8IH75              	100.00%		A3GFB3              	100.00%
Bootstrap support for A8IH75 as seed ortholog is 61%.
Alternative seed ortholog is A8J8S4 (8 bits away from this cluster)
Bootstrap support for A3GFB3 as seed ortholog is 63%.
Alternative seed ortholog is A3LYC2 (10 bits away from this cluster)

Group of orthologs #1426. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 S.stipitis:71

A8IJG5              	100.00%		A3GGY3              	100.00%
Bootstrap support for A8IJG5 as seed ortholog is 100%.
Bootstrap support for A3GGY3 as seed ortholog is 100%.

Group of orthologs #1427. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 S.stipitis:71

A8JCK9              	100.00%		A3LWI6              	100.00%
Bootstrap support for A8JCK9 as seed ortholog is 100%.
Bootstrap support for A3LWI6 as seed ortholog is 100%.

Group of orthologs #1428. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8IVY1              	100.00%		A3LPN1              	100.00%
                    	       		A3LSP6              	85.82%
                    	       		A3LZW9              	25.35%
                    	       		A3LSF2              	8.91%
Bootstrap support for A8IVY1 as seed ortholog is 100%.
Bootstrap support for A3LPN1 as seed ortholog is 100%.

Group of orthologs #1429. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8INI0              	100.00%		A3GH99              	100.00%
A8IIT0              	5.02%		
Bootstrap support for A8INI0 as seed ortholog is 100%.
Bootstrap support for A3GH99 as seed ortholog is 100%.

Group of orthologs #1430. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8IE68              	100.00%		A3LS29              	100.00%
A8IFN7              	20.34%		
Bootstrap support for A8IE68 as seed ortholog is 100%.
Bootstrap support for A3LS29 as seed ortholog is 100%.

Group of orthologs #1431. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8JD88              	100.00%		A3GG06              	100.00%
                    	       		A3LSH1              	19.09%
Bootstrap support for A8JD88 as seed ortholog is 100%.
Bootstrap support for A3GG06 as seed ortholog is 100%.

Group of orthologs #1432. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8I2T2              	100.00%		A3GGY6              	100.00%
Bootstrap support for A8I2T2 as seed ortholog is 100%.
Bootstrap support for A3GGY6 as seed ortholog is 100%.

Group of orthologs #1433. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8HPS8              	100.00%		A3LU09              	100.00%
Bootstrap support for A8HPS8 as seed ortholog is 100%.
Bootstrap support for A3LU09 as seed ortholog is 100%.

Group of orthologs #1434. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

A8J6A7              	100.00%		A3LZM8              	100.00%
Bootstrap support for A8J6A7 as seed ortholog is 100%.
Bootstrap support for A3LZM8 as seed ortholog is 100%.

Group of orthologs #1435. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 S.stipitis:70

P48267              	100.00%		A3LQM6              	100.00%
Bootstrap support for P48267 as seed ortholog is 100%.
Bootstrap support for A3LQM6 as seed ortholog is 100%.

Group of orthologs #1436. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:69

A8JH65              	100.00%		A3LYP8              	100.00%
A8IFV5              	30.55%		
A8IQS8              	27.71%		
Bootstrap support for A8JH65 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #1437. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 S.stipitis:69

A8IHI1              	100.00%		A3LZX8              	100.00%
A8IHN7              	5.16%		
Bootstrap support for A8IHI1 as seed ortholog is 77%.
Bootstrap support for A3LZX8 as seed ortholog is 100%.

Group of orthologs #1438. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:69

A8IWT0              	100.00%		A3GFT8              	100.00%
Bootstrap support for A8IWT0 as seed ortholog is 100%.
Bootstrap support for A3GFT8 as seed ortholog is 100%.

Group of orthologs #1439. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:69

A8IID7              	100.00%		A3LSK9              	100.00%
Bootstrap support for A8IID7 as seed ortholog is 100%.
Bootstrap support for A3LSK9 as seed ortholog is 100%.

Group of orthologs #1440. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 S.stipitis:69

A8IVB1              	100.00%		A3LYA5              	100.00%
Bootstrap support for A8IVB1 as seed ortholog is 80%.
Bootstrap support for A3LYA5 as seed ortholog is 100%.

Group of orthologs #1441. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 S.stipitis:69

A8J6P9              	100.00%		A3LQN0              	100.00%
Bootstrap support for A8J6P9 as seed ortholog is 75%.
Bootstrap support for A3LQN0 as seed ortholog is 100%.

Group of orthologs #1442. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:69

A8IYX9              	100.00%		A3LY28              	100.00%
Bootstrap support for A8IYX9 as seed ortholog is 100%.
Bootstrap support for A3LY28 as seed ortholog is 100%.

Group of orthologs #1443. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:69

A8J5M0              	100.00%		A3LVR2              	100.00%
Bootstrap support for A8J5M0 as seed ortholog is 100%.
Bootstrap support for A3LVR2 as seed ortholog is 100%.

Group of orthologs #1444. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 S.stipitis:69

A8JGX7              	100.00%		A3M0I5              	100.00%
Bootstrap support for A8JGX7 as seed ortholog is 100%.
Bootstrap support for A3M0I5 as seed ortholog is 100%.

Group of orthologs #1445. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 S.stipitis:68

A8IG04              	100.00%		A3LYQ1              	100.00%
A8J0L2              	16.58%		
A8J8L0              	7.32%		
Bootstrap support for A8IG04 as seed ortholog is 100%.
Bootstrap support for A3LYQ1 as seed ortholog is 100%.

Group of orthologs #1446. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 S.stipitis:68

A8HSU4              	100.00%		A3LUZ5              	100.00%
Bootstrap support for A8HSU4 as seed ortholog is 100%.
Bootstrap support for A3LUZ5 as seed ortholog is 100%.

Group of orthologs #1447. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 S.stipitis:68

A8IIM0              	100.00%		A3LSV0              	100.00%
Bootstrap support for A8IIM0 as seed ortholog is 100%.
Bootstrap support for A3LSV0 as seed ortholog is 100%.

Group of orthologs #1448. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 S.stipitis:68

A8J0D6              	100.00%		A3GGA4              	100.00%
Bootstrap support for A8J0D6 as seed ortholog is 100%.
Bootstrap support for A3GGA4 as seed ortholog is 100%.

Group of orthologs #1449. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 S.stipitis:68

A8JDP6              	100.00%		A3LSH2              	100.00%
Bootstrap support for A8JDP6 as seed ortholog is 84%.
Bootstrap support for A3LSH2 as seed ortholog is 100%.

Group of orthologs #1450. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:67

A8HQD3              	100.00%		A3GG04              	100.00%
Bootstrap support for A8HQD3 as seed ortholog is 100%.
Bootstrap support for A3GG04 as seed ortholog is 100%.

Group of orthologs #1451. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:67

A8HQ36              	100.00%		A3LSW9              	100.00%
Bootstrap support for A8HQ36 as seed ortholog is 100%.
Bootstrap support for A3LSW9 as seed ortholog is 100%.

Group of orthologs #1452. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:67

A8HQ64              	100.00%		A3LUC3              	100.00%
Bootstrap support for A8HQ64 as seed ortholog is 100%.
Bootstrap support for A3LUC3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:67

A8IFR5              	100.00%		A3LQL6              	100.00%
Bootstrap support for A8IFR5 as seed ortholog is 100%.
Bootstrap support for A3LQL6 as seed ortholog is 100%.

Group of orthologs #1454. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:67

A8IIF1              	100.00%		A3LQK7              	100.00%
Bootstrap support for A8IIF1 as seed ortholog is 100%.
Bootstrap support for A3LQK7 as seed ortholog is 100%.

Group of orthologs #1455. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 S.stipitis:67

A8J3F8              	100.00%		A3LXP1              	100.00%
Bootstrap support for A8J3F8 as seed ortholog is 100%.
Bootstrap support for A3LXP1 as seed ortholog is 100%.

Group of orthologs #1456. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 S.stipitis:66

A8J3L2              	100.00%		A3LX83              	100.00%
                    	       		A3LVX5              	34.22%
                    	       		A3LVX4              	33.50%
                    	       		A3LPE1              	31.31%
Bootstrap support for A8J3L2 as seed ortholog is 57%.
Alternative seed ortholog is A8I4J6 (4 bits away from this cluster)
Bootstrap support for A3LX83 as seed ortholog is 100%.

Group of orthologs #1457. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:66

A8IMY7              	100.00%		A3LTJ1              	100.00%
                    	       		A3LNT9              	16.97%
Bootstrap support for A8IMY7 as seed ortholog is 100%.
Bootstrap support for A3LTJ1 as seed ortholog is 100%.

Group of orthologs #1458. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:66

A8JHP9              	100.00%		A3GH60              	100.00%
A8J074              	19.94%		
Bootstrap support for A8JHP9 as seed ortholog is 100%.
Bootstrap support for A3GH60 as seed ortholog is 100%.

Group of orthologs #1459. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:66

A8JFS6              	100.00%		A3LQ26              	100.00%
                    	       		A3LTN0              	12.96%
Bootstrap support for A8JFS6 as seed ortholog is 100%.
Bootstrap support for A3LQ26 as seed ortholog is 100%.

Group of orthologs #1460. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:66

A8I8A8              	100.00%		A3LXK7              	100.00%
Bootstrap support for A8I8A8 as seed ortholog is 100%.
Bootstrap support for A3LXK7 as seed ortholog is 100%.

Group of orthologs #1461. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:66

A8IWK3              	100.00%		A3LQ61              	100.00%
Bootstrap support for A8IWK3 as seed ortholog is 100%.
Bootstrap support for A3LQ61 as seed ortholog is 100%.

Group of orthologs #1462. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 S.stipitis:66

A8IY09              	100.00%		A3LQZ4              	100.00%
Bootstrap support for A8IY09 as seed ortholog is 100%.
Bootstrap support for A3LQZ4 as seed ortholog is 100%.

Group of orthologs #1463. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:65

A8J3U6              	100.00%		A3LVQ9              	100.00%
A8J3U5              	82.89%		A3GGL9              	33.89%
A8J3T2              	15.79%		
Bootstrap support for A8J3U6 as seed ortholog is 100%.
Bootstrap support for A3LVQ9 as seed ortholog is 100%.

Group of orthologs #1464. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:65

A8I9B0              	100.00%		A3LQ56              	100.00%
A8I2W2              	7.37%		
Bootstrap support for A8I9B0 as seed ortholog is 100%.
Bootstrap support for A3LQ56 as seed ortholog is 100%.

Group of orthologs #1465. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:65

A8IP12              	100.00%		A3LVT8              	100.00%
Bootstrap support for A8IP12 as seed ortholog is 100%.
Bootstrap support for A3LVT8 as seed ortholog is 100%.

Group of orthologs #1466. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 S.stipitis:65

A8J3U9              	100.00%		A3LNI0              	100.00%
Bootstrap support for A8J3U9 as seed ortholog is 55%.
Alternative seed ortholog is A8JF15 (2 bits away from this cluster)
Bootstrap support for A3LNI0 as seed ortholog is 100%.

Group of orthologs #1467. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 S.stipitis:65

Q8GUQ9              	100.00%		A3LMZ0              	100.00%
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.
Bootstrap support for A3LMZ0 as seed ortholog is 100%.

Group of orthologs #1468. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

A8IZE9              	100.00%		A3LSJ1              	100.00%
P59776              	7.14%		
Bootstrap support for A8IZE9 as seed ortholog is 100%.
Bootstrap support for A3LSJ1 as seed ortholog is 100%.

Group of orthologs #1469. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

A8JBD0              	100.00%		A3LNP0              	100.00%
                    	       		A3LQ25              	5.21%
Bootstrap support for A8JBD0 as seed ortholog is 100%.
Bootstrap support for A3LNP0 as seed ortholog is 100%.

Group of orthologs #1470. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

P05726              	100.00%		A3LMT6              	100.00%
A8J8X9              	8.33%		
Bootstrap support for P05726 as seed ortholog is 100%.
Bootstrap support for A3LMT6 as seed ortholog is 100%.

Group of orthologs #1471. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

A8HRG9              	100.00%		A3GG85              	100.00%
Bootstrap support for A8HRG9 as seed ortholog is 100%.
Bootstrap support for A3GG85 as seed ortholog is 100%.

Group of orthologs #1472. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

A8I2N9              	100.00%		A3LNS8              	100.00%
Bootstrap support for A8I2N9 as seed ortholog is 100%.
Bootstrap support for A3LNS8 as seed ortholog is 100%.

Group of orthologs #1473. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

A8IQ82              	100.00%		A3LY08              	100.00%
Bootstrap support for A8IQ82 as seed ortholog is 100%.
Bootstrap support for A3LY08 as seed ortholog is 100%.

Group of orthologs #1474. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 S.stipitis:64

A8J7C1              	100.00%		A3LWI1              	100.00%
Bootstrap support for A8J7C1 as seed ortholog is 100%.
Bootstrap support for A3LWI1 as seed ortholog is 100%.

Group of orthologs #1475. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:63

A8JFB8              	100.00%		A3GH02              	100.00%
A8J006              	34.28%		A3GH09              	51.09%
A8J9M5              	28.71%		A3LRH1              	22.89%
A8IZ81              	27.23%		A3LRQ3              	14.15%
A8IRP0              	21.91%		A3LWY9              	11.21%
A8J3L0              	20.42%		A3LWY8              	11.02%
A8JHW9              	18.81%		A3LZ63              	10.35%
A8J0K6              	16.83%		A3GGI3              	9.78%
                    	       		A3LZ62              	9.78%
                    	       		A3LWL3              	8.55%
                    	       		A3LZP4              	8.36%
                    	       		A3LWM0              	7.98%
                    	       		A3LTM9              	5.22%
Bootstrap support for A8JFB8 as seed ortholog is 100%.
Bootstrap support for A3GH02 as seed ortholog is 100%.

Group of orthologs #1476. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:63

A8ITN4              	100.00%		A3GGV5              	100.00%
Bootstrap support for A8ITN4 as seed ortholog is 100%.
Bootstrap support for A3GGV5 as seed ortholog is 100%.

Group of orthologs #1477. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:63

A8J650              	100.00%		A3GFA8              	100.00%
Bootstrap support for A8J650 as seed ortholog is 100%.
Bootstrap support for A3GFA8 as seed ortholog is 100%.

Group of orthologs #1478. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:63

A8JBZ0              	100.00%		A3GFC6              	100.00%
Bootstrap support for A8JBZ0 as seed ortholog is 100%.
Bootstrap support for A3GFC6 as seed ortholog is 100%.

Group of orthologs #1479. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:63

A8IVS0              	100.00%		A3LYX4              	100.00%
Bootstrap support for A8IVS0 as seed ortholog is 100%.
Bootstrap support for A3LYX4 as seed ortholog is 100%.

Group of orthologs #1480. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 S.stipitis:63

Q94KS3              	100.00%		A3LQH2              	100.00%
Bootstrap support for Q94KS3 as seed ortholog is 100%.
Bootstrap support for A3LQH2 as seed ortholog is 100%.

Group of orthologs #1481. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8IBH3              	100.00%		A3LZV3              	100.00%
A8IHH1              	38.28%		
A8IB85              	28.41%		
A8IB37              	24.98%		
A8ISJ6              	21.26%		
Q9ATG5              	21.18%		
A8JFK7              	20.82%		
A8HPB6              	18.70%		
A8I963              	17.46%		
A8IT92              	17.38%		
A8HPB7              	17.24%		
A8J863              	15.92%		
A8IT77              	15.27%		
A8I8K6              	14.68%		
A8IT91              	12.86%		
A8I8K3              	12.34%		
A8J861              	7.09%		
Bootstrap support for A8IBH3 as seed ortholog is 100%.
Bootstrap support for A3LZV3 as seed ortholog is 100%.

Group of orthologs #1482. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

Q8S4W5              	100.00%		A3LQU7              	100.00%
A8JFM0              	13.60%		
A8IR64              	7.20%		
Bootstrap support for Q8S4W5 as seed ortholog is 100%.
Bootstrap support for A3LQU7 as seed ortholog is 100%.

Group of orthologs #1483. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8HPU4              	100.00%		A3GGU1              	100.00%
Bootstrap support for A8HPU4 as seed ortholog is 100%.
Bootstrap support for A3GGU1 as seed ortholog is 100%.

Group of orthologs #1484. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A0FK50              	100.00%		A3LR97              	100.00%
Bootstrap support for A0FK50 as seed ortholog is 100%.
Bootstrap support for A3LR97 as seed ortholog is 100%.

Group of orthologs #1485. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8HWT6              	100.00%		A3LV52              	100.00%
Bootstrap support for A8HWT6 as seed ortholog is 100%.
Bootstrap support for A3LV52 as seed ortholog is 100%.

Group of orthologs #1486. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8HUH8              	100.00%		A3LX82              	100.00%
Bootstrap support for A8HUH8 as seed ortholog is 100%.
Bootstrap support for A3LX82 as seed ortholog is 100%.

Group of orthologs #1487. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8IKY9              	100.00%		A3LU03              	100.00%
Bootstrap support for A8IKY9 as seed ortholog is 100%.
Bootstrap support for A3LU03 as seed ortholog is 100%.

Group of orthologs #1488. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8IV41              	100.00%		A3LQU5              	100.00%
Bootstrap support for A8IV41 as seed ortholog is 100%.
Bootstrap support for A3LQU5 as seed ortholog is 100%.

Group of orthologs #1489. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8IW57              	100.00%		A3LR92              	100.00%
Bootstrap support for A8IW57 as seed ortholog is 100%.
Bootstrap support for A3LR92 as seed ortholog is 100%.

Group of orthologs #1490. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8JCE2              	100.00%		A3LNL5              	100.00%
Bootstrap support for A8JCE2 as seed ortholog is 100%.
Bootstrap support for A3LNL5 as seed ortholog is 100%.

Group of orthologs #1491. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 S.stipitis:62

A8JBZ8              	100.00%		A3LVK4              	100.00%
Bootstrap support for A8JBZ8 as seed ortholog is 100%.
Bootstrap support for A3LVK4 as seed ortholog is 100%.

Group of orthologs #1492. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8I8X0              	100.00%		A3LP92              	100.00%
A8HP61              	5.63%		
Bootstrap support for A8I8X0 as seed ortholog is 100%.
Bootstrap support for A3LP92 as seed ortholog is 100%.

Group of orthologs #1493. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8ILS2              	100.00%		A3LQU8              	100.00%
                    	       		A3LPJ3              	14.48%
Bootstrap support for A8ILS2 as seed ortholog is 100%.
Bootstrap support for A3LQU8 as seed ortholog is 100%.

Group of orthologs #1494. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8ICC6              	100.00%		A3GGA3              	100.00%
Bootstrap support for A8ICC6 as seed ortholog is 100%.
Bootstrap support for A3GGA3 as seed ortholog is 100%.

Group of orthologs #1495. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8HSK5              	100.00%		A3LY58              	100.00%
Bootstrap support for A8HSK5 as seed ortholog is 100%.
Bootstrap support for A3LY58 as seed ortholog is 100%.

Group of orthologs #1496. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8ICD3              	100.00%		A3LSN4              	100.00%
Bootstrap support for A8ICD3 as seed ortholog is 100%.
Bootstrap support for A3LSN4 as seed ortholog is 100%.

Group of orthologs #1497. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8ISL4              	100.00%		A3LU48              	100.00%
Bootstrap support for A8ISL4 as seed ortholog is 100%.
Bootstrap support for A3LU48 as seed ortholog is 100%.

Group of orthologs #1498. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 S.stipitis:61

A8JBQ1              	100.00%		A3GEV3              	100.00%
Bootstrap support for A8JBQ1 as seed ortholog is 66%.
Alternative seed ortholog is A8JIK1 (17 bits away from this cluster)
Bootstrap support for A3GEV3 as seed ortholog is 100%.

Group of orthologs #1499. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 S.stipitis:61

A8JGY0              	100.00%		A3LXT7              	100.00%
Bootstrap support for A8JGY0 as seed ortholog is 100%.
Bootstrap support for A3LXT7 as seed ortholog is 100%.

Group of orthologs #1500. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:60

A8JCS9              	100.00%		A3LXC0              	100.00%
Bootstrap support for A8JCS9 as seed ortholog is 100%.
Bootstrap support for A3LXC0 as seed ortholog is 100%.

Group of orthologs #1501. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:60

Q6V9A9              	100.00%		A3LWG7              	100.00%
Bootstrap support for Q6V9A9 as seed ortholog is 100%.
Bootstrap support for A3LWG7 as seed ortholog is 100%.

Group of orthologs #1502. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 S.stipitis:60

A8JHS5              	100.00%		A3M0D9              	100.00%
Bootstrap support for A8JHS5 as seed ortholog is 100%.
Bootstrap support for A3M0D9 as seed ortholog is 100%.

Group of orthologs #1503. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8JBA1              	100.00%		A3LPQ4              	100.00%
A8IGJ1              	21.41%		A3LQJ6              	40.99%
                    	       		A3LZP0              	40.64%
                    	       		A3LUM2              	31.57%
                    	       		A3GGF8              	23.42%
                    	       		A3LND2              	5.17%
Bootstrap support for A8JBA1 as seed ortholog is 100%.
Bootstrap support for A3LPQ4 as seed ortholog is 100%.

Group of orthologs #1504. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8IT66              	100.00%		A3LPH0              	100.00%
A8HZC0              	8.89%		
Bootstrap support for A8IT66 as seed ortholog is 100%.
Bootstrap support for A3LPH0 as seed ortholog is 100%.

Group of orthologs #1505. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8IGE2              	100.00%		A3LWU6              	100.00%
                    	       		A3LWU7              	100.00%
Bootstrap support for A8IGE2 as seed ortholog is 100%.
Bootstrap support for A3LWU6 as seed ortholog is 100%.
Bootstrap support for A3LWU7 as seed ortholog is 100%.

Group of orthologs #1506. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A2PZD3              	100.00%		A3LQ59              	100.00%
Bootstrap support for A2PZD3 as seed ortholog is 100%.
Bootstrap support for A3LQ59 as seed ortholog is 100%.

Group of orthologs #1507. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8IT97              	100.00%		A3GFM7              	100.00%
Bootstrap support for A8IT97 as seed ortholog is 100%.
Bootstrap support for A3GFM7 as seed ortholog is 100%.

Group of orthologs #1508. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8IIM4              	100.00%		A3LUC9              	100.00%
Bootstrap support for A8IIM4 as seed ortholog is 100%.
Bootstrap support for A3LUC9 as seed ortholog is 100%.

Group of orthologs #1509. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8IC41              	100.00%		A3LX70              	100.00%
Bootstrap support for A8IC41 as seed ortholog is 100%.
Bootstrap support for A3LX70 as seed ortholog is 100%.

Group of orthologs #1510. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8JFH5              	100.00%		A3GFI9              	100.00%
Bootstrap support for A8JFH5 as seed ortholog is 100%.
Bootstrap support for A3GFI9 as seed ortholog is 100%.

Group of orthologs #1511. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

A8JEM3              	100.00%		A3LND7              	100.00%
Bootstrap support for A8JEM3 as seed ortholog is 100%.
Bootstrap support for A3LND7 as seed ortholog is 100%.

Group of orthologs #1512. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 S.stipitis:59

Q9FYV4              	100.00%		A3LPB2              	100.00%
Bootstrap support for Q9FYV4 as seed ortholog is 100%.
Bootstrap support for A3LPB2 as seed ortholog is 100%.

Group of orthologs #1513. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 S.stipitis:58

A8IGB8              	100.00%		A3LWI5              	100.00%
Bootstrap support for A8IGB8 as seed ortholog is 100%.
Bootstrap support for A3LWI5 as seed ortholog is 100%.

Group of orthologs #1514. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:57

A8J8G2              	100.00%		A3LRY8              	100.00%
                    	       		A3GFR6              	25.11%
Bootstrap support for A8J8G2 as seed ortholog is 100%.
Bootstrap support for A3LRY8 as seed ortholog is 100%.

Group of orthologs #1515. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:57

Q6UP29              	100.00%		A3LX96              	100.00%
A8IS09              	19.00%		
Bootstrap support for Q6UP29 as seed ortholog is 100%.
Bootstrap support for A3LX96 as seed ortholog is 100%.

Group of orthologs #1516. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:57

A8HMV2              	100.00%		A3LV08              	100.00%
Bootstrap support for A8HMV2 as seed ortholog is 100%.
Bootstrap support for A3LV08 as seed ortholog is 100%.

Group of orthologs #1517. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:57

A8ITW3              	100.00%		A3LVC0              	100.00%
Bootstrap support for A8ITW3 as seed ortholog is 100%.
Bootstrap support for A3LVC0 as seed ortholog is 100%.

Group of orthologs #1518. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 S.stipitis:57

A8J2R2              	100.00%		A3LY40              	100.00%
Bootstrap support for A8J2R2 as seed ortholog is 100%.
Bootstrap support for A3LY40 as seed ortholog is 100%.

Group of orthologs #1519. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 S.stipitis:56

A8I0B6              	100.00%		A3GI27              	100.00%
Bootstrap support for A8I0B6 as seed ortholog is 100%.
Bootstrap support for A3GI27 as seed ortholog is 100%.

Group of orthologs #1520. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 S.stipitis:56

A8JHD2              	100.00%		A3GG97              	100.00%
Bootstrap support for A8JHD2 as seed ortholog is 100%.
Bootstrap support for A3GG97 as seed ortholog is 100%.

Group of orthologs #1521. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 S.stipitis:55

A8JEK5              	100.00%		A3M0G4              	100.00%
Bootstrap support for A8JEK5 as seed ortholog is 100%.
Bootstrap support for A3M0G4 as seed ortholog is 100%.

Group of orthologs #1522. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8HUC9              	100.00%		A3GGI2              	100.00%
A8JDX3              	27.27%		A3LW46              	12.23%
Bootstrap support for A8HUC9 as seed ortholog is 100%.
Bootstrap support for A3GGI2 as seed ortholog is 100%.

Group of orthologs #1523. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8JEL8              	100.00%		A3LVK9              	100.00%
                    	       		A3LSN0              	5.70%
Bootstrap support for A8JEL8 as seed ortholog is 100%.
Bootstrap support for A3LVK9 as seed ortholog is 100%.

Group of orthologs #1524. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8HQJ0              	100.00%		A3LZ85              	100.00%
Bootstrap support for A8HQJ0 as seed ortholog is 100%.
Bootstrap support for A3LZ85 as seed ortholog is 100%.

Group of orthologs #1525. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8IUL9              	100.00%		A3LP20              	100.00%
Bootstrap support for A8IUL9 as seed ortholog is 100%.
Bootstrap support for A3LP20 as seed ortholog is 100%.

Group of orthologs #1526. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8J3X5              	100.00%		A3LTU7              	100.00%
Bootstrap support for A8J3X5 as seed ortholog is 100%.
Bootstrap support for A3LTU7 as seed ortholog is 100%.

Group of orthologs #1527. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8JG77              	100.00%		A3GG55              	100.00%
Bootstrap support for A8JG77 as seed ortholog is 100%.
Bootstrap support for A3GG55 as seed ortholog is 100%.

Group of orthologs #1528. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8JCL2              	100.00%		A3LPP2              	100.00%
Bootstrap support for A8JCL2 as seed ortholog is 100%.
Bootstrap support for A3LPP2 as seed ortholog is 100%.

Group of orthologs #1529. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

Q6UP31              	100.00%		A3LUH8              	100.00%
Bootstrap support for Q6UP31 as seed ortholog is 100%.
Bootstrap support for A3LUH8 as seed ortholog is 100%.

Group of orthologs #1530. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 S.stipitis:54

A8JHY3              	100.00%		A3LZ67              	100.00%
Bootstrap support for A8JHY3 as seed ortholog is 100%.
Bootstrap support for A3LZ67 as seed ortholog is 100%.

Group of orthologs #1531. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 S.stipitis:53

A8HVN9              	100.00%		A3LQG8              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 66%.
Alternative seed ortholog is A8IEX6 (12 bits away from this cluster)
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #1532. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

A8IG60              	100.00%		A3GF85              	100.00%
Bootstrap support for A8IG60 as seed ortholog is 100%.
Bootstrap support for A3GF85 as seed ortholog is 100%.

Group of orthologs #1533. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

A8IGB6              	100.00%		A3GGM1              	100.00%
Bootstrap support for A8IGB6 as seed ortholog is 100%.
Bootstrap support for A3GGM1 as seed ortholog is 100%.

Group of orthologs #1534. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

A8IGW2              	100.00%		A3LNG8              	100.00%
Bootstrap support for A8IGW2 as seed ortholog is 100%.
Bootstrap support for A3LNG8 as seed ortholog is 100%.

Group of orthologs #1535. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

A8J5B8              	100.00%		A3LQC5              	100.00%
Bootstrap support for A8J5B8 as seed ortholog is 100%.
Bootstrap support for A3LQC5 as seed ortholog is 100%.

Group of orthologs #1536. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

Q9LKH0              	100.00%		A3LN19              	100.00%
Bootstrap support for Q9LKH0 as seed ortholog is 100%.
Bootstrap support for A3LN19 as seed ortholog is 100%.

Group of orthologs #1537. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

A8JC42              	100.00%		A3LYG3              	100.00%
Bootstrap support for A8JC42 as seed ortholog is 100%.
Bootstrap support for A3LYG3 as seed ortholog is 100%.

Group of orthologs #1538. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 S.stipitis:53

Q9ZTA7              	100.00%		A3LPR7              	100.00%
Bootstrap support for Q9ZTA7 as seed ortholog is 100%.
Bootstrap support for A3LPR7 as seed ortholog is 100%.

Group of orthologs #1539. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:52

A8JDC5              	100.00%		A3GGH5              	100.00%
A8J594              	11.90%		
Bootstrap support for A8JDC5 as seed ortholog is 100%.
Bootstrap support for A3GGH5 as seed ortholog is 100%.

Group of orthologs #1540. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:52

A8J2M2              	100.00%		A3LYU0              	100.00%
                    	       		A3LQR7              	58.14%
Bootstrap support for A8J2M2 as seed ortholog is 100%.
Bootstrap support for A3LYU0 as seed ortholog is 100%.

Group of orthologs #1541. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:52

A8HQD2              	100.00%		A3GH72              	100.00%
Bootstrap support for A8HQD2 as seed ortholog is 100%.
Bootstrap support for A3GH72 as seed ortholog is 100%.

Group of orthologs #1542. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 S.stipitis:52

A8J9H2              	100.00%		A3GGN2              	100.00%
Bootstrap support for A8J9H2 as seed ortholog is 59%.
Alternative seed ortholog is A8IRU4 (2 bits away from this cluster)
Bootstrap support for A3GGN2 as seed ortholog is 100%.

Group of orthologs #1543. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:52

A8IWT4              	100.00%		A3LZ75              	100.00%
Bootstrap support for A8IWT4 as seed ortholog is 100%.
Bootstrap support for A3LZ75 as seed ortholog is 100%.

Group of orthologs #1544. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 S.stipitis:52

A8JFI0              	100.00%		A3LR73              	100.00%
Bootstrap support for A8JFI0 as seed ortholog is 100%.
Bootstrap support for A3LR73 as seed ortholog is 100%.

Group of orthologs #1545. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 S.stipitis:51

A8HW20              	100.00%		A3GHP7              	100.00%
Bootstrap support for A8HW20 as seed ortholog is 100%.
Bootstrap support for A3GHP7 as seed ortholog is 100%.

Group of orthologs #1546. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 S.stipitis:50

A8IGU4              	100.00%		A3LS33              	100.00%
Bootstrap support for A8IGU4 as seed ortholog is 100%.
Bootstrap support for A3LS33 as seed ortholog is 100%.

Group of orthologs #1547. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 S.stipitis:50

A8J8W4              	100.00%		A3LUS2              	100.00%
Bootstrap support for A8J8W4 as seed ortholog is 100%.
Bootstrap support for A3LUS2 as seed ortholog is 100%.

Group of orthologs #1548. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 S.stipitis:50

Q6UP32              	100.00%		A3LPM5              	100.00%
Bootstrap support for Q6UP32 as seed ortholog is 100%.
Bootstrap support for A3LPM5 as seed ortholog is 100%.

Group of orthologs #1549. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:49

A8HT82              	100.00%		A3GI76              	100.00%
Bootstrap support for A8HT82 as seed ortholog is 100%.
Bootstrap support for A3GI76 as seed ortholog is 100%.

Group of orthologs #1550. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:49

A8I459              	100.00%		A3GEW4              	100.00%
Bootstrap support for A8I459 as seed ortholog is 100%.
Bootstrap support for A3GEW4 as seed ortholog is 100%.

Group of orthologs #1551. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:49

A8HZZ1              	100.00%		A3LVC4              	100.00%
Bootstrap support for A8HZZ1 as seed ortholog is 100%.
Bootstrap support for A3LVC4 as seed ortholog is 100%.

Group of orthologs #1552. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:49

A8ISS8              	100.00%		A3LV06              	100.00%
Bootstrap support for A8ISS8 as seed ortholog is 100%.
Bootstrap support for A3LV06 as seed ortholog is 100%.

Group of orthologs #1553. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 S.stipitis:49

A8J4K7              	100.00%		A3LPL7              	100.00%
Bootstrap support for A8J4K7 as seed ortholog is 100%.
Bootstrap support for A3LPL7 as seed ortholog is 100%.

Group of orthologs #1554. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:48

A8HQA9              	100.00%		A3LRT0              	100.00%
A8HMD4              	31.02%		
Bootstrap support for A8HQA9 as seed ortholog is 100%.
Bootstrap support for A3LRT0 as seed ortholog is 100%.

Group of orthologs #1555. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:48

A8J977              	100.00%		A3LQ20              	100.00%
                    	       		A3LN10              	44.23%
Bootstrap support for A8J977 as seed ortholog is 100%.
Bootstrap support for A3LQ20 as seed ortholog is 100%.

Group of orthologs #1556. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:48

A8I5E8              	100.00%		A3LV09              	100.00%
Bootstrap support for A8I5E8 as seed ortholog is 100%.
Bootstrap support for A3LV09 as seed ortholog is 100%.

Group of orthologs #1557. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:48

A8J1W1              	100.00%		A3GGL5              	100.00%
Bootstrap support for A8J1W1 as seed ortholog is 100%.
Bootstrap support for A3GGL5 as seed ortholog is 100%.

Group of orthologs #1558. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 S.stipitis:48

A8JDN8              	100.00%		A3LWG1              	100.00%
Bootstrap support for A8JDN8 as seed ortholog is 100%.
Bootstrap support for A3LWG1 as seed ortholog is 100%.

Group of orthologs #1559. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:47

A8J6S1              	100.00%		A3LNC8              	100.00%
A8I108              	13.57%		
A8JCA4              	9.14%		
A8J0G3              	5.31%		
Bootstrap support for A8J6S1 as seed ortholog is 100%.
Bootstrap support for A3LNC8 as seed ortholog is 100%.

Group of orthologs #1560. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:47

A8HMB6              	100.00%		A3LPY6              	100.00%
Bootstrap support for A8HMB6 as seed ortholog is 100%.
Bootstrap support for A3LPY6 as seed ortholog is 100%.

Group of orthologs #1561. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:47

A8IFE6              	100.00%		A3GF13              	100.00%
Bootstrap support for A8IFE6 as seed ortholog is 100%.
Bootstrap support for A3GF13 as seed ortholog is 100%.

Group of orthologs #1562. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:47

A8I2C0              	100.00%		A3LR55              	100.00%
Bootstrap support for A8I2C0 as seed ortholog is 100%.
Bootstrap support for A3LR55 as seed ortholog is 100%.

Group of orthologs #1563. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 S.stipitis:47

A8IJM8              	100.00%		A3LQL7              	100.00%
Bootstrap support for A8IJM8 as seed ortholog is 100%.
Bootstrap support for A3LQL7 as seed ortholog is 100%.

Group of orthologs #1564. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 S.stipitis:46

A8JHY4              	100.00%		A3LU32              	100.00%
Q6S7R7              	25.24%		
A8JFK6              	13.59%		
Bootstrap support for A8JHY4 as seed ortholog is 100%.
Bootstrap support for A3LU32 as seed ortholog is 100%.

Group of orthologs #1565. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 S.stipitis:46

A8IWI1              	100.00%		A3LZB7              	100.00%
Bootstrap support for A8IWI1 as seed ortholog is 100%.
Bootstrap support for A3LZB7 as seed ortholog is 100%.

Group of orthologs #1566. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 S.stipitis:46

Q6QIV8              	100.00%		A3LYR8              	100.00%
Bootstrap support for Q6QIV8 as seed ortholog is 100%.
Bootstrap support for A3LYR8 as seed ortholog is 100%.

Group of orthologs #1567. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:45

A8IU01              	100.00%		A3LUL2              	100.00%
A8J5M5              	5.47%		
Bootstrap support for A8IU01 as seed ortholog is 100%.
Bootstrap support for A3LUL2 as seed ortholog is 100%.

Group of orthologs #1568. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:45

A8IHY1              	100.00%		A3LP94              	100.00%
Bootstrap support for A8IHY1 as seed ortholog is 100%.
Bootstrap support for A3LP94 as seed ortholog is 100%.

Group of orthologs #1569. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:45

A8HZF6              	100.00%		A3LXD3              	100.00%
Bootstrap support for A8HZF6 as seed ortholog is 100%.
Bootstrap support for A3LXD3 as seed ortholog is 100%.

Group of orthologs #1570. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:45

A8IW04              	100.00%		A3LV38              	100.00%
Bootstrap support for A8IW04 as seed ortholog is 100%.
Bootstrap support for A3LV38 as seed ortholog is 100%.

Group of orthologs #1571. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:45

A8IWL1              	100.00%		A3M002              	100.00%
Bootstrap support for A8IWL1 as seed ortholog is 100%.
Bootstrap support for A3M002 as seed ortholog is 100%.

Group of orthologs #1572. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 S.stipitis:45

A8J5N7              	100.00%		A3LSW1              	100.00%
Bootstrap support for A8J5N7 as seed ortholog is 100%.
Bootstrap support for A3LSW1 as seed ortholog is 100%.

Group of orthologs #1573. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:44

A8IZ28              	100.00%		A3GF43              	100.00%
Bootstrap support for A8IZ28 as seed ortholog is 100%.
Bootstrap support for A3GF43 as seed ortholog is 100%.

Group of orthologs #1574. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:44

A8I6P9              	100.00%		A3M0I0              	100.00%
Bootstrap support for A8I6P9 as seed ortholog is 100%.
Bootstrap support for A3M0I0 as seed ortholog is 100%.

Group of orthologs #1575. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:44

A8J419              	100.00%		A3GI23              	100.00%
Bootstrap support for A8J419 as seed ortholog is 100%.
Bootstrap support for A3GI23 as seed ortholog is 100%.

Group of orthologs #1576. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:44

A8JAF5              	100.00%		A3LSH9              	100.00%
Bootstrap support for A8JAF5 as seed ortholog is 100%.
Bootstrap support for A3LSH9 as seed ortholog is 100%.

Group of orthologs #1577. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 S.stipitis:44

A8JH63              	100.00%		A3LVV4              	100.00%
Bootstrap support for A8JH63 as seed ortholog is 100%.
Bootstrap support for A3LVV4 as seed ortholog is 100%.

Group of orthologs #1578. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 S.stipitis:43

A8IJZ3              	100.00%		A3GIB0              	100.00%
A8IVI0              	6.29%		
Bootstrap support for A8IJZ3 as seed ortholog is 100%.
Bootstrap support for A3GIB0 as seed ortholog is 100%.

Group of orthologs #1579. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 S.stipitis:43

A8IZW8              	100.00%		A3GH20              	100.00%
Bootstrap support for A8IZW8 as seed ortholog is 100%.
Bootstrap support for A3GH20 as seed ortholog is 100%.

Group of orthologs #1580. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 S.stipitis:42

A8IZ04              	100.00%		A3LRU8              	100.00%
A8IYZ9              	63.82%		A3LNC5              	17.57%
A8HXN0              	16.91%		
Bootstrap support for A8IZ04 as seed ortholog is 100%.
Bootstrap support for A3LRU8 as seed ortholog is 100%.

Group of orthologs #1581. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 S.stipitis:41

A8JAG2              	100.00%		A3LSV7              	100.00%
Bootstrap support for A8JAG2 as seed ortholog is 100%.
Bootstrap support for A3LSV7 as seed ortholog is 100%.

Group of orthologs #1582. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 S.stipitis:40

A8I3F2              	100.00%		A3LT04              	100.00%
Bootstrap support for A8I3F2 as seed ortholog is 100%.
Bootstrap support for A3LT04 as seed ortholog is 100%.