###################################
2219 groups of orthologs
2629 in-paralogs from C.reinhardtii
3172 in-paralogs from P.ramorum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4522 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2576 P.ramorum:2497

A8JHU7              	100.00%		H3G8E7              	100.00%
Bootstrap support for A8JHU7 as seed ortholog is 100%.
Bootstrap support for H3G8E7 as seed ortholog is 100%.

Group of orthologs #2. Best score 4104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2006 P.ramorum:1759

A8IUF0              	100.00%		H3G6N0              	100.00%
Bootstrap support for A8IUF0 as seed ortholog is 100%.
Bootstrap support for H3G6N0 as seed ortholog is 100%.

Group of orthologs #3. Best score 3987 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3987 P.ramorum:3987

A8HPL0              	100.00%		H3G8I9              	100.00%
Bootstrap support for A8HPL0 as seed ortholog is 100%.
Bootstrap support for H3G8I9 as seed ortholog is 100%.

Group of orthologs #4. Best score 3786 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1133 P.ramorum:653

A8J063              	100.00%		H3GXS3              	100.00%
                    	       		H3G6G1              	12.30%
Bootstrap support for A8J063 as seed ortholog is 100%.
Bootstrap support for H3GXS3 as seed ortholog is 100%.

Group of orthologs #5. Best score 3396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:402 P.ramorum:201

A8I5C3              	100.00%		H3G9Y8              	100.00%
Bootstrap support for A8I5C3 as seed ortholog is 99%.
Bootstrap support for H3G9Y8 as seed ortholog is 95%.

Group of orthologs #6. Best score 3339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1854 P.ramorum:1523

A8J1M5              	100.00%		H3HCG5              	100.00%
                    	       		H3GR96              	8.01%
Bootstrap support for A8J1M5 as seed ortholog is 100%.
Bootstrap support for H3HCG5 as seed ortholog is 100%.

Group of orthologs #7. Best score 2959 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1520 P.ramorum:860

A8J336              	100.00%		H3HBP5              	100.00%
Bootstrap support for A8J336 as seed ortholog is 100%.
Bootstrap support for H3HBP5 as seed ortholog is 100%.

Group of orthologs #8. Best score 2515 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.ramorum:261

A8IV22              	100.00%		H3G7F9              	100.00%
Bootstrap support for A8IV22 as seed ortholog is 99%.
Bootstrap support for H3G7F9 as seed ortholog is 98%.

Group of orthologs #9. Best score 2301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1517 P.ramorum:747

Q9SMH5              	100.00%		H3HBY2              	100.00%
Bootstrap support for Q9SMH5 as seed ortholog is 100%.
Bootstrap support for H3HBY2 as seed ortholog is 100%.

Group of orthologs #10. Best score 2153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:613 P.ramorum:690

A8JFP1              	100.00%		H3GEN5              	100.00%
                    	       		H3GWH2              	10.28%
Bootstrap support for A8JFP1 as seed ortholog is 100%.
Bootstrap support for H3GEN5 as seed ortholog is 100%.

Group of orthologs #11. Best score 1877 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1877 P.ramorum:979

A8JI25              	100.00%		H3G6V1              	100.00%
Bootstrap support for A8JI25 as seed ortholog is 100%.
Bootstrap support for H3G6V1 as seed ortholog is 100%.

Group of orthologs #12. Best score 1730 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1336 P.ramorum:1004

A8IRZ2              	100.00%		H3GA78              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for H3GA78 as seed ortholog is 100%.

Group of orthologs #13. Best score 1565 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1565 P.ramorum:1565

Q5DM57              	100.00%		H3GS66              	100.00%
Bootstrap support for Q5DM57 as seed ortholog is 100%.
Bootstrap support for H3GS66 as seed ortholog is 100%.

Group of orthologs #14. Best score 1516 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1516 P.ramorum:994

A8I4S9              	100.00%		H3G958              	100.00%
Bootstrap support for A8I4S9 as seed ortholog is 100%.
Bootstrap support for H3G958 as seed ortholog is 100%.

Group of orthologs #15. Best score 1476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 P.ramorum:1476

A8IWA6              	100.00%		H3GNE8              	100.00%
Bootstrap support for A8IWA6 as seed ortholog is 100%.
Bootstrap support for H3GNE8 as seed ortholog is 100%.

Group of orthologs #16. Best score 1336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1336 P.ramorum:1336

A8HYR2              	100.00%		H3G8D7              	100.00%
Bootstrap support for A8HYR2 as seed ortholog is 100%.
Bootstrap support for H3G8D7 as seed ortholog is 100%.

Group of orthologs #17. Best score 1293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1293 P.ramorum:1293

A8IY03              	100.00%		H3G9F7              	100.00%
Bootstrap support for A8IY03 as seed ortholog is 100%.
Bootstrap support for H3G9F7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1289 P.ramorum:1289

A8I9Z6              	100.00%		H3GA07              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 100%.
Bootstrap support for H3GA07 as seed ortholog is 100%.

Group of orthologs #19. Best score 1287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1287 P.ramorum:1287

A8J3Y6              	100.00%		H3G9D6              	100.00%
Bootstrap support for A8J3Y6 as seed ortholog is 100%.
Bootstrap support for H3G9D6 as seed ortholog is 100%.

Group of orthologs #20. Best score 1237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1237 P.ramorum:1237

A8JFR3              	100.00%		H3G7I2              	100.00%
Bootstrap support for A8JFR3 as seed ortholog is 100%.
Bootstrap support for H3G7I2 as seed ortholog is 100%.

Group of orthologs #21. Best score 1235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1126 P.ramorum:290

A8JD08              	100.00%		H3G7M6              	100.00%
Bootstrap support for A8JD08 as seed ortholog is 100%.
Bootstrap support for H3G7M6 as seed ortholog is 99%.

Group of orthologs #22. Best score 1228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1228 P.ramorum:1228

A8HRR9              	100.00%		H3G9M7              	100.00%
Bootstrap support for A8HRR9 as seed ortholog is 100%.
Bootstrap support for H3G9M7 as seed ortholog is 100%.

Group of orthologs #23. Best score 1222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:812 P.ramorum:717

A8HW56              	100.00%		H3G7S3              	100.00%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for H3G7S3 as seed ortholog is 100%.

Group of orthologs #24. Best score 1214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1214 P.ramorum:1214

A8IFY3              	100.00%		H3GJC4              	100.00%
Bootstrap support for A8IFY3 as seed ortholog is 100%.
Bootstrap support for H3GJC4 as seed ortholog is 100%.

Group of orthologs #25. Best score 1192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1192 P.ramorum:1192

A8JH01              	100.00%		H3GAQ5              	100.00%
Bootstrap support for A8JH01 as seed ortholog is 100%.
Bootstrap support for H3GAQ5 as seed ortholog is 100%.

Group of orthologs #26. Best score 1169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.ramorum:1169

A8IC95              	100.00%		H3G8Q3              	100.00%
Bootstrap support for A8IC95 as seed ortholog is 99%.
Bootstrap support for H3G8Q3 as seed ortholog is 100%.

Group of orthologs #27. Best score 1163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1163 P.ramorum:1163

A8HQ52              	100.00%		H3HD69              	100.00%
Bootstrap support for A8HQ52 as seed ortholog is 100%.
Bootstrap support for H3HD69 as seed ortholog is 100%.

Group of orthologs #28. Best score 1148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:939 P.ramorum:722

A8I542              	100.00%		H3G9P7              	100.00%
Bootstrap support for A8I542 as seed ortholog is 100%.
Bootstrap support for H3G9P7 as seed ortholog is 100%.

Group of orthologs #29. Best score 1096 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1096 P.ramorum:775

A8JCA8              	100.00%		H3G917              	100.00%
Bootstrap support for A8JCA8 as seed ortholog is 100%.
Bootstrap support for H3G917 as seed ortholog is 100%.

Group of orthologs #30. Best score 1082 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1082 P.ramorum:1082

A8JCU1              	100.00%		H3GWQ1              	100.00%
Bootstrap support for A8JCU1 as seed ortholog is 100%.
Bootstrap support for H3GWQ1 as seed ortholog is 100%.

Group of orthologs #31. Best score 1069 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1069 P.ramorum:1069

A8JDR3              	100.00%		H3GA16              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for H3GA16 as seed ortholog is 100%.

Group of orthologs #32. Best score 1042 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1042 P.ramorum:1042

A8IVM9              	100.00%		H3G8G6              	100.00%
Bootstrap support for A8IVM9 as seed ortholog is 100%.
Bootstrap support for H3G8G6 as seed ortholog is 100%.

Group of orthologs #33. Best score 1035 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1035 P.ramorum:1035

A8IWF9              	100.00%		H3G9W7              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for H3G9W7 as seed ortholog is 100%.

Group of orthologs #34. Best score 1032 bits
Score difference with first non-orthologous sequence - C.reinhardtii:892 P.ramorum:640

A8JHX9              	100.00%		H3G8I7              	100.00%
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for H3G8I7 as seed ortholog is 100%.

Group of orthologs #35. Best score 1025 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1025 P.ramorum:1025

A8HMQ1              	100.00%		H3G9W6              	100.00%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for H3G9W6 as seed ortholog is 100%.

Group of orthologs #36. Best score 1023 bits
Score difference with first non-orthologous sequence - C.reinhardtii:771 P.ramorum:1023

A8HPJ0              	100.00%		H3GAM4              	100.00%
Bootstrap support for A8HPJ0 as seed ortholog is 100%.
Bootstrap support for H3GAM4 as seed ortholog is 100%.

Group of orthologs #37. Best score 1019 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 P.ramorum:655

A8J1U1              	100.00%		H3G966              	100.00%
Bootstrap support for A8J1U1 as seed ortholog is 100%.
Bootstrap support for H3G966 as seed ortholog is 100%.

Group of orthologs #38. Best score 1006 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1006 P.ramorum:1006

A8J2W2              	100.00%		H3GA87              	100.00%
Bootstrap support for A8J2W2 as seed ortholog is 100%.
Bootstrap support for H3GA87 as seed ortholog is 100%.

Group of orthologs #39. Best score 993 bits
Score difference with first non-orthologous sequence - C.reinhardtii:993 P.ramorum:993

A8IY70              	100.00%		H3GTK1              	100.00%
Bootstrap support for A8IY70 as seed ortholog is 100%.
Bootstrap support for H3GTK1 as seed ortholog is 100%.

Group of orthologs #40. Best score 972 bits
Score difference with first non-orthologous sequence - C.reinhardtii:972 P.ramorum:272

A8IVG0              	100.00%		H3GAB7              	100.00%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for H3GAB7 as seed ortholog is 99%.

Group of orthologs #41. Best score 970 bits
Score difference with first non-orthologous sequence - C.reinhardtii:393 P.ramorum:297

A8JEU4              	100.00%		H3GB49              	100.00%
                    	       		H3GB15              	80.79%
                    	       		H3G9G6              	27.74%
Bootstrap support for A8JEU4 as seed ortholog is 100%.
Bootstrap support for H3GB49 as seed ortholog is 100%.

Group of orthologs #42. Best score 957 bits
Score difference with first non-orthologous sequence - C.reinhardtii:634 P.ramorum:484

A8J568              	100.00%		H3H1S7              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for H3H1S7 as seed ortholog is 100%.

Group of orthologs #43. Best score 950 bits
Score difference with first non-orthologous sequence - C.reinhardtii:950 P.ramorum:302

A8ISZ1              	100.00%		H3GH83              	100.00%
Bootstrap support for A8ISZ1 as seed ortholog is 100%.
Bootstrap support for H3GH83 as seed ortholog is 100%.

Group of orthologs #44. Best score 949 bits
Score difference with first non-orthologous sequence - C.reinhardtii:600 P.ramorum:669

A8HXT4              	100.00%		H3G968              	100.00%
Bootstrap support for A8HXT4 as seed ortholog is 100%.
Bootstrap support for H3G968 as seed ortholog is 100%.

Group of orthologs #45. Best score 941 bits
Score difference with first non-orthologous sequence - C.reinhardtii:780 P.ramorum:941

A8I9D7              	100.00%		H3G5R3              	100.00%
Bootstrap support for A8I9D7 as seed ortholog is 100%.
Bootstrap support for H3G5R3 as seed ortholog is 100%.

Group of orthologs #46. Best score 935 bits
Score difference with first non-orthologous sequence - C.reinhardtii:935 P.ramorum:856

A8JGS8              	100.00%		H3G6X8              	100.00%
Bootstrap support for A8JGS8 as seed ortholog is 100%.
Bootstrap support for H3G6X8 as seed ortholog is 100%.

Group of orthologs #47. Best score 915 bits
Score difference with first non-orthologous sequence - C.reinhardtii:915 P.ramorum:915

A8JEV6              	100.00%		H3G9Y5              	100.00%
Bootstrap support for A8JEV6 as seed ortholog is 100%.
Bootstrap support for H3G9Y5 as seed ortholog is 100%.

Group of orthologs #48. Best score 907 bits
Score difference with first non-orthologous sequence - C.reinhardtii:907 P.ramorum:907

A8HP06              	100.00%		H3GIQ9              	100.00%
Bootstrap support for A8HP06 as seed ortholog is 100%.
Bootstrap support for H3GIQ9 as seed ortholog is 100%.

Group of orthologs #49. Best score 903 bits
Score difference with first non-orthologous sequence - C.reinhardtii:539 P.ramorum:3

A8IK98              	100.00%		H3GSL8              	100.00%
Bootstrap support for A8IK98 as seed ortholog is 100%.
Bootstrap support for H3GSL8 as seed ortholog is 48%.
Alternative seed ortholog is H3GTJ9 (3 bits away from this cluster)

Group of orthologs #50. Best score 902 bits
Score difference with first non-orthologous sequence - C.reinhardtii:902 P.ramorum:783

A8IB70              	100.00%		H3G8E6              	100.00%
Bootstrap support for A8IB70 as seed ortholog is 100%.
Bootstrap support for H3G8E6 as seed ortholog is 100%.

Group of orthologs #51. Best score 899 bits
Score difference with first non-orthologous sequence - C.reinhardtii:357 P.ramorum:258

A8I7T8              	100.00%		H3G860              	100.00%
A8I7S9              	66.16%		
Bootstrap support for A8I7T8 as seed ortholog is 100%.
Bootstrap support for H3G860 as seed ortholog is 100%.

Group of orthologs #52. Best score 898 bits
Score difference with first non-orthologous sequence - C.reinhardtii:898 P.ramorum:898

A8HZ23              	100.00%		H3GTR2              	100.00%
Bootstrap support for A8HZ23 as seed ortholog is 100%.
Bootstrap support for H3GTR2 as seed ortholog is 100%.

Group of orthologs #53. Best score 892 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 P.ramorum:332

A8JGT9              	100.00%		H3GEP5              	100.00%
                    	       		H3H7Q1              	100.00%
                    	       		H3G6A8              	35.08%
Bootstrap support for A8JGT9 as seed ortholog is 99%.
Bootstrap support for H3GEP5 as seed ortholog is 100%.
Bootstrap support for H3H7Q1 as seed ortholog is 100%.

Group of orthologs #54. Best score 890 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:890

A8JA18              	100.00%		H3G875              	100.00%
Bootstrap support for A8JA18 as seed ortholog is 97%.
Bootstrap support for H3G875 as seed ortholog is 100%.

Group of orthologs #55. Best score 887 bits
Score difference with first non-orthologous sequence - C.reinhardtii:887 P.ramorum:887

A8J7V3              	100.00%		H3GUV1              	100.00%
                    	       		H3G802              	12.94%
Bootstrap support for A8J7V3 as seed ortholog is 100%.
Bootstrap support for H3GUV1 as seed ortholog is 100%.

Group of orthologs #56. Best score 886 bits
Score difference with first non-orthologous sequence - C.reinhardtii:886 P.ramorum:265

A8HUA7              	100.00%		H3G5Z3              	100.00%
A8HUA1              	56.17%		
Bootstrap support for A8HUA7 as seed ortholog is 100%.
Bootstrap support for H3G5Z3 as seed ortholog is 100%.

Group of orthologs #57. Best score 873 bits
Score difference with first non-orthologous sequence - C.reinhardtii:665 P.ramorum:71

A8J6M4              	100.00%		H3G8G1              	100.00%
A8J6M5              	75.91%		
Bootstrap support for A8J6M4 as seed ortholog is 100%.
Bootstrap support for H3G8G1 as seed ortholog is 85%.

Group of orthologs #58. Best score 869 bits
Score difference with first non-orthologous sequence - C.reinhardtii:869 P.ramorum:869

A8IDG4              	100.00%		H3G7C4              	100.00%
Bootstrap support for A8IDG4 as seed ortholog is 100%.
Bootstrap support for H3G7C4 as seed ortholog is 100%.

Group of orthologs #59. Best score 864 bits
Score difference with first non-orthologous sequence - C.reinhardtii:630 P.ramorum:40

Q540H1              	100.00%		H3G9Y4              	100.00%
                    	       		H3G7E9              	73.58%
Bootstrap support for Q540H1 as seed ortholog is 100%.
Bootstrap support for H3G9Y4 as seed ortholog is 97%.

Group of orthologs #60. Best score 854 bits
Score difference with first non-orthologous sequence - C.reinhardtii:854 P.ramorum:854

A8J6S7              	100.00%		H3G5U5              	100.00%
Bootstrap support for A8J6S7 as seed ortholog is 100%.
Bootstrap support for H3G5U5 as seed ortholog is 100%.

Group of orthologs #61. Best score 852 bits
Score difference with first non-orthologous sequence - C.reinhardtii:574 P.ramorum:466

A8IXZ0              	100.00%		H3GAD7              	100.00%
Bootstrap support for A8IXZ0 as seed ortholog is 100%.
Bootstrap support for H3GAD7 as seed ortholog is 100%.

Group of orthologs #62. Best score 847 bits
Score difference with first non-orthologous sequence - C.reinhardtii:847 P.ramorum:847

A8IUL6              	100.00%		H3GKT1              	100.00%
Bootstrap support for A8IUL6 as seed ortholog is 100%.
Bootstrap support for H3GKT1 as seed ortholog is 100%.

Group of orthologs #63. Best score 844 bits
Score difference with first non-orthologous sequence - C.reinhardtii:844 P.ramorum:844

A8J3A4              	100.00%		H3G9B0              	100.00%
Bootstrap support for A8J3A4 as seed ortholog is 100%.
Bootstrap support for H3G9B0 as seed ortholog is 100%.

Group of orthologs #64. Best score 843 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:148

A8IE86              	100.00%		H3GKM1              	100.00%
Bootstrap support for A8IE86 as seed ortholog is 85%.
Bootstrap support for H3GKM1 as seed ortholog is 98%.

Group of orthologs #65. Best score 842 bits
Score difference with first non-orthologous sequence - C.reinhardtii:842 P.ramorum:842

A8HWB9              	100.00%		H3HCY3              	100.00%
Bootstrap support for A8HWB9 as seed ortholog is 100%.
Bootstrap support for H3HCY3 as seed ortholog is 100%.

Group of orthologs #66. Best score 831 bits
Score difference with first non-orthologous sequence - C.reinhardtii:699 P.ramorum:668

A8IFK0              	100.00%		H3G4Y7              	100.00%
A8IFH0              	30.42%		
Bootstrap support for A8IFK0 as seed ortholog is 100%.
Bootstrap support for H3G4Y7 as seed ortholog is 100%.

Group of orthologs #67. Best score 827 bits
Score difference with first non-orthologous sequence - C.reinhardtii:827 P.ramorum:827

A8JEP9              	100.00%		H3GTJ1              	100.00%
Bootstrap support for A8JEP9 as seed ortholog is 100%.
Bootstrap support for H3GTJ1 as seed ortholog is 100%.

Group of orthologs #68. Best score 819 bits
Score difference with first non-orthologous sequence - C.reinhardtii:819 P.ramorum:819

A8J4D9              	100.00%		H3GJ85              	100.00%
Bootstrap support for A8J4D9 as seed ortholog is 100%.
Bootstrap support for H3GJ85 as seed ortholog is 100%.

Group of orthologs #69. Best score 818 bits
Score difference with first non-orthologous sequence - C.reinhardtii:818 P.ramorum:235

A8J1C1              	100.00%		H3G877              	100.00%
Bootstrap support for A8J1C1 as seed ortholog is 100%.
Bootstrap support for H3G877 as seed ortholog is 99%.

Group of orthologs #70. Best score 816 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:353

A8IZU0              	100.00%		H3G8C0              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 99%.
Bootstrap support for H3G8C0 as seed ortholog is 100%.

Group of orthologs #71. Best score 812 bits
Score difference with first non-orthologous sequence - C.reinhardtii:812 P.ramorum:812

A8I8N8              	100.00%		H3G6H1              	100.00%
Bootstrap support for A8I8N8 as seed ortholog is 100%.
Bootstrap support for H3G6H1 as seed ortholog is 100%.

Group of orthologs #72. Best score 792 bits
Score difference with first non-orthologous sequence - C.reinhardtii:792 P.ramorum:792

A8JDQ4              	100.00%		H3GHV9              	100.00%
Bootstrap support for A8JDQ4 as seed ortholog is 100%.
Bootstrap support for H3GHV9 as seed ortholog is 100%.

Group of orthologs #73. Best score 791 bits
Score difference with first non-orthologous sequence - C.reinhardtii:791 P.ramorum:791

A8IUN1              	100.00%		H3GUY1              	100.00%
Bootstrap support for A8IUN1 as seed ortholog is 100%.
Bootstrap support for H3GUY1 as seed ortholog is 100%.

Group of orthologs #74. Best score 785 bits
Score difference with first non-orthologous sequence - C.reinhardtii:785 P.ramorum:785

A8IX80              	100.00%		H3G777              	100.00%
                    	       		H3GB83              	64.08%
                    	       		H3H908              	35.63%
Bootstrap support for A8IX80 as seed ortholog is 100%.
Bootstrap support for H3G777 as seed ortholog is 100%.

Group of orthologs #75. Best score 783 bits
Score difference with first non-orthologous sequence - C.reinhardtii:630 P.ramorum:575

Q93Z22              	100.00%		H3G5C6              	100.00%
                    	       		H3GHU6              	34.91%
Bootstrap support for Q93Z22 as seed ortholog is 100%.
Bootstrap support for H3G5C6 as seed ortholog is 100%.

Group of orthologs #76. Best score 783 bits
Score difference with first non-orthologous sequence - C.reinhardtii:783 P.ramorum:783

A8HSQ2              	100.00%		H3HC99              	100.00%
Bootstrap support for A8HSQ2 as seed ortholog is 100%.
Bootstrap support for H3HC99 as seed ortholog is 100%.

Group of orthologs #77. Best score 763 bits
Score difference with first non-orthologous sequence - C.reinhardtii:644 P.ramorum:763

A8I164              	100.00%		H3GB02              	100.00%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for H3GB02 as seed ortholog is 100%.

Group of orthologs #78. Best score 761 bits
Score difference with first non-orthologous sequence - C.reinhardtii:761 P.ramorum:654

A8HYC0              	100.00%		H3GD86              	100.00%
Bootstrap support for A8HYC0 as seed ortholog is 100%.
Bootstrap support for H3GD86 as seed ortholog is 100%.

Group of orthologs #79. Best score 757 bits
Score difference with first non-orthologous sequence - C.reinhardtii:757 P.ramorum:757

A8IM71              	100.00%		H3G9Z1              	100.00%
Bootstrap support for A8IM71 as seed ortholog is 100%.
Bootstrap support for H3G9Z1 as seed ortholog is 100%.

Group of orthologs #80. Best score 757 bits
Score difference with first non-orthologous sequence - C.reinhardtii:757 P.ramorum:323

A8J0B0              	100.00%		H3G885              	100.00%
Bootstrap support for A8J0B0 as seed ortholog is 100%.
Bootstrap support for H3G885 as seed ortholog is 100%.

Group of orthologs #81. Best score 754 bits
Score difference with first non-orthologous sequence - C.reinhardtii:754 P.ramorum:754

A8ITN7              	100.00%		H3G9Q2              	100.00%
Bootstrap support for A8ITN7 as seed ortholog is 100%.
Bootstrap support for H3G9Q2 as seed ortholog is 100%.

Group of orthologs #82. Best score 749 bits
Score difference with first non-orthologous sequence - C.reinhardtii:749 P.ramorum:749

A8J0R6              	100.00%		H3G795              	100.00%
Bootstrap support for A8J0R6 as seed ortholog is 100%.
Bootstrap support for H3G795 as seed ortholog is 100%.

Group of orthologs #83. Best score 743 bits
Score difference with first non-orthologous sequence - C.reinhardtii:743 P.ramorum:743

A8J4P9              	100.00%		H3G914              	100.00%
Bootstrap support for A8J4P9 as seed ortholog is 100%.
Bootstrap support for H3G914 as seed ortholog is 100%.

Group of orthologs #84. Best score 740 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 P.ramorum:155

A8J8F1              	100.00%		H3GK62              	100.00%
A8IT38              	100.00%		H3GK63              	100.00%
A8IT35              	54.84%		H3GK60              	52.06%
A8J6J3              	23.76%		H3H8K6              	36.26%
A8IZY4              	20.45%		H3H5U7              	34.39%
                    	       		H3GS99              	33.64%
                    	       		H3H6M5              	33.22%
                    	       		H3GSA1              	32.75%
                    	       		H3GNG1              	32.43%
                    	       		H3GLW5              	32.15%
                    	       		H3GL25              	32.06%
                    	       		H3GNF8              	31.87%
                    	       		H3GNG6              	31.45%
                    	       		H3GLZ4              	31.36%
                    	       		H3GNG4              	31.31%
                    	       		H3H6S7              	31.21%
                    	       		H3GNG3              	31.12%
                    	       		H3GNG2              	30.98%
                    	       		H3GD45              	30.65%
                    	       		H3H1R1              	30.29%
                    	       		H3GDX6              	29.92%
                    	       		H3H672              	29.91%
                    	       		H3GR90              	29.91%
                    	       		H3H0T2              	29.44%
                    	       		H3H0T1              	28.93%
                    	       		H3GD44              	28.88%
                    	       		H3GU09              	28.88%
                    	       		H3H2W8              	27.76%
                    	       		H3H1B8              	27.60%
                    	       		H3GQ62              	27.29%
                    	       		H3GXR5              	26.82%
                    	       		H3GLT8              	26.31%
                    	       		H3GXR3              	25.33%
                    	       		H3H2P6              	25.23%
                    	       		H3GFN6              	24.44%
                    	       		H3GSR4              	22.76%
                    	       		H3H0T0              	18.46%
                    	       		H3GXY8              	16.40%
                    	       		H3GXU4              	15.07%
                    	       		H3H1B4              	11.40%
                    	       		H3GP04              	11.12%
Bootstrap support for A8J8F1 as seed ortholog is 100%.
Bootstrap support for A8IT38 as seed ortholog is 100%.
Bootstrap support for H3GK62 as seed ortholog is 99%.
Bootstrap support for H3GK63 as seed ortholog is 95%.

Group of orthologs #85. Best score 737 bits
Score difference with first non-orthologous sequence - C.reinhardtii:661 P.ramorum:737

A8J7J2              	100.00%		H3G9K3              	100.00%
Bootstrap support for A8J7J2 as seed ortholog is 100%.
Bootstrap support for H3G9K3 as seed ortholog is 100%.

Group of orthologs #86. Best score 737 bits
Score difference with first non-orthologous sequence - C.reinhardtii:737 P.ramorum:612

A8J9F3              	100.00%		H3H0Y2              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for H3H0Y2 as seed ortholog is 100%.

Group of orthologs #87. Best score 723 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.ramorum:31

A8IVJ6              	100.00%		H3GQ80              	100.00%
A8IVJ3              	38.30%		H3G823              	26.86%
Bootstrap support for A8IVJ6 as seed ortholog is 96%.
Bootstrap support for H3GQ80 as seed ortholog is 60%.
Alternative seed ortholog is H3GNA3 (31 bits away from this cluster)

Group of orthologs #88. Best score 723 bits
Score difference with first non-orthologous sequence - C.reinhardtii:723 P.ramorum:723

A8JH39              	100.00%		H3G930              	100.00%
Bootstrap support for A8JH39 as seed ortholog is 100%.
Bootstrap support for H3G930 as seed ortholog is 100%.

Group of orthologs #89. Best score 721 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 P.ramorum:164

A8IH85              	100.00%		H3GBZ6              	100.00%
Bootstrap support for A8IH85 as seed ortholog is 100%.
Bootstrap support for H3GBZ6 as seed ortholog is 99%.

Group of orthologs #90. Best score 720 bits
Score difference with first non-orthologous sequence - C.reinhardtii:609 P.ramorum:720

A8IA45              	100.00%		H3GAT6              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for H3GAT6 as seed ortholog is 100%.

Group of orthologs #91. Best score 720 bits
Score difference with first non-orthologous sequence - C.reinhardtii:720 P.ramorum:465

A8JCF0              	100.00%		H3GAJ9              	100.00%
Bootstrap support for A8JCF0 as seed ortholog is 100%.
Bootstrap support for H3GAJ9 as seed ortholog is 100%.

Group of orthologs #92. Best score 717 bits
Score difference with first non-orthologous sequence - C.reinhardtii:717 P.ramorum:717

A8HP46              	100.00%		H3G9F8              	100.00%
Bootstrap support for A8HP46 as seed ortholog is 100%.
Bootstrap support for H3G9F8 as seed ortholog is 100%.

Group of orthologs #93. Best score 714 bits
Score difference with first non-orthologous sequence - C.reinhardtii:714 P.ramorum:714

A8JHA4              	100.00%		H3G9H3              	100.00%
Bootstrap support for A8JHA4 as seed ortholog is 100%.
Bootstrap support for H3G9H3 as seed ortholog is 100%.

Group of orthologs #94. Best score 712 bits
Score difference with first non-orthologous sequence - C.reinhardtii:712 P.ramorum:493

A8IRW5              	100.00%		H3GCT4              	100.00%
Bootstrap support for A8IRW5 as seed ortholog is 100%.
Bootstrap support for H3GCT4 as seed ortholog is 100%.

Group of orthologs #95. Best score 711 bits
Score difference with first non-orthologous sequence - C.reinhardtii:625 P.ramorum:711

A8HQ74              	100.00%		H3G7T2              	100.00%
Bootstrap support for A8HQ74 as seed ortholog is 100%.
Bootstrap support for H3G7T2 as seed ortholog is 100%.

Group of orthologs #96. Best score 709 bits
Score difference with first non-orthologous sequence - C.reinhardtii:709 P.ramorum:709

A8J189              	100.00%		H3GRC1              	100.00%
Bootstrap support for A8J189 as seed ortholog is 100%.
Bootstrap support for H3GRC1 as seed ortholog is 100%.

Group of orthologs #97. Best score 705 bits
Score difference with first non-orthologous sequence - C.reinhardtii:395 P.ramorum:33

A8IJV9              	100.00%		H3G5Z1              	100.00%
A8IZL7              	39.10%		
A8IS11              	32.35%		
A8J0V2              	26.42%		
Bootstrap support for A8IJV9 as seed ortholog is 100%.
Bootstrap support for H3G5Z1 as seed ortholog is 68%.
Alternative seed ortholog is H3GQ90 (33 bits away from this cluster)

Group of orthologs #98. Best score 705 bits
Score difference with first non-orthologous sequence - C.reinhardtii:619 P.ramorum:705

A8II42              	100.00%		H3GB16              	100.00%
Bootstrap support for A8II42 as seed ortholog is 100%.
Bootstrap support for H3GB16 as seed ortholog is 100%.

Group of orthologs #99. Best score 704 bits
Score difference with first non-orthologous sequence - C.reinhardtii:704 P.ramorum:704

A8JHY5              	100.00%		H3G975              	100.00%
Bootstrap support for A8JHY5 as seed ortholog is 100%.
Bootstrap support for H3G975 as seed ortholog is 100%.

Group of orthologs #100. Best score 703 bits
Score difference with first non-orthologous sequence - C.reinhardtii:537 P.ramorum:374

A8HX15              	100.00%		H3G603              	100.00%
Bootstrap support for A8HX15 as seed ortholog is 100%.
Bootstrap support for H3G603 as seed ortholog is 100%.

Group of orthologs #101. Best score 701 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:701

A8IQU3              	100.00%		H3G9K5              	100.00%
Bootstrap support for A8IQU3 as seed ortholog is 99%.
Bootstrap support for H3G9K5 as seed ortholog is 100%.

Group of orthologs #102. Best score 699 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.ramorum:132

A8IIL1              	100.00%		H3G8X6              	100.00%
Bootstrap support for A8IIL1 as seed ortholog is 100%.
Bootstrap support for H3G8X6 as seed ortholog is 99%.

Group of orthologs #103. Best score 696 bits
Score difference with first non-orthologous sequence - C.reinhardtii:696 P.ramorum:696

A8IE23              	100.00%		H3G8D0              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for H3G8D0 as seed ortholog is 100%.

Group of orthologs #104. Best score 696 bits
Score difference with first non-orthologous sequence - C.reinhardtii:626 P.ramorum:696

A8IIP9              	100.00%		H3G982              	100.00%
Bootstrap support for A8IIP9 as seed ortholog is 100%.
Bootstrap support for H3G982 as seed ortholog is 100%.

Group of orthologs #105. Best score 695 bits
Score difference with first non-orthologous sequence - C.reinhardtii:695 P.ramorum:695

A8IAN1              	100.00%		H3G8E5              	100.00%
Bootstrap support for A8IAN1 as seed ortholog is 100%.
Bootstrap support for H3G8E5 as seed ortholog is 100%.

Group of orthologs #106. Best score 695 bits
Score difference with first non-orthologous sequence - C.reinhardtii:695 P.ramorum:4

A8JI26              	100.00%		H3GQ49              	100.00%
Bootstrap support for A8JI26 as seed ortholog is 100%.
Bootstrap support for H3GQ49 as seed ortholog is 49%.
Alternative seed ortholog is H3G6R8 (4 bits away from this cluster)

Group of orthologs #107. Best score 694 bits
Score difference with first non-orthologous sequence - C.reinhardtii:694 P.ramorum:694

A8IXE2              	100.00%		H3GA28              	100.00%
Bootstrap support for A8IXE2 as seed ortholog is 100%.
Bootstrap support for H3GA28 as seed ortholog is 100%.

Group of orthologs #108. Best score 692 bits
Score difference with first non-orthologous sequence - C.reinhardtii:502 P.ramorum:315

A8IHB3              	100.00%		H3G8K6              	100.00%
Bootstrap support for A8IHB3 as seed ortholog is 100%.
Bootstrap support for H3G8K6 as seed ortholog is 100%.

Group of orthologs #109. Best score 692 bits
Score difference with first non-orthologous sequence - C.reinhardtii:692 P.ramorum:692

A8II71              	100.00%		H3G952              	100.00%
Bootstrap support for A8II71 as seed ortholog is 100%.
Bootstrap support for H3G952 as seed ortholog is 100%.

Group of orthologs #110. Best score 691 bits
Score difference with first non-orthologous sequence - C.reinhardtii:499 P.ramorum:403

A8J4Z2              	100.00%		H3H452              	100.00%
                    	       		H3GME3              	61.19%
Bootstrap support for A8J4Z2 as seed ortholog is 100%.
Bootstrap support for H3H452 as seed ortholog is 100%.

Group of orthologs #111. Best score 688 bits
Score difference with first non-orthologous sequence - C.reinhardtii:592 P.ramorum:336

A8JCV8              	100.00%		H3GB63              	100.00%
A8JCQ8              	28.36%		H3GAK4              	91.43%
A8JFR9              	11.00%		H3GAK3              	78.29%
                    	       		H3H1K9              	77.55%
Bootstrap support for A8JCV8 as seed ortholog is 100%.
Bootstrap support for H3GB63 as seed ortholog is 100%.

Group of orthologs #112. Best score 688 bits
Score difference with first non-orthologous sequence - C.reinhardtii:688 P.ramorum:688

A8IEL6              	100.00%		H3G9A5              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for H3G9A5 as seed ortholog is 100%.

Group of orthologs #113. Best score 684 bits
Score difference with first non-orthologous sequence - C.reinhardtii:684 P.ramorum:684

A8IXE0              	100.00%		H3G8U2              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for H3G8U2 as seed ortholog is 100%.

Group of orthologs #114. Best score 684 bits
Score difference with first non-orthologous sequence - C.reinhardtii:684 P.ramorum:684

A8J4W8              	100.00%		H3G8X0              	100.00%
Bootstrap support for A8J4W8 as seed ortholog is 100%.
Bootstrap support for H3G8X0 as seed ortholog is 100%.

Group of orthologs #115. Best score 682 bits
Score difference with first non-orthologous sequence - C.reinhardtii:596 P.ramorum:682

A8J524              	100.00%		H3G897              	100.00%
Bootstrap support for A8J524 as seed ortholog is 100%.
Bootstrap support for H3G897 as seed ortholog is 100%.

Group of orthologs #116. Best score 678 bits
Score difference with first non-orthologous sequence - C.reinhardtii:678 P.ramorum:678

A8IGM5              	100.00%		H3G891              	100.00%
Bootstrap support for A8IGM5 as seed ortholog is 100%.
Bootstrap support for H3G891 as seed ortholog is 100%.

Group of orthologs #117. Best score 677 bits
Score difference with first non-orthologous sequence - C.reinhardtii:585 P.ramorum:557

A8JAG5              	100.00%		H3GV59              	100.00%
Bootstrap support for A8JAG5 as seed ortholog is 100%.
Bootstrap support for H3GV59 as seed ortholog is 100%.

Group of orthologs #118. Best score 676 bits
Score difference with first non-orthologous sequence - C.reinhardtii:605 P.ramorum:676

A8J014              	100.00%		H3G985              	100.00%
Bootstrap support for A8J014 as seed ortholog is 100%.
Bootstrap support for H3G985 as seed ortholog is 100%.

Group of orthologs #119. Best score 676 bits
Score difference with first non-orthologous sequence - C.reinhardtii:527 P.ramorum:375

A8IV67              	100.00%		H3GLH3              	100.00%
Bootstrap support for A8IV67 as seed ortholog is 100%.
Bootstrap support for H3GLH3 as seed ortholog is 100%.

Group of orthologs #120. Best score 675 bits
Score difference with first non-orthologous sequence - C.reinhardtii:675 P.ramorum:414

A8J3N8              	100.00%		H3G6T5              	100.00%
Bootstrap support for A8J3N8 as seed ortholog is 100%.
Bootstrap support for H3G6T5 as seed ortholog is 100%.

Group of orthologs #121. Best score 674 bits
Score difference with first non-orthologous sequence - C.reinhardtii:603 P.ramorum:603

A8J5Z8              	100.00%		H3GAU4              	100.00%
Bootstrap support for A8J5Z8 as seed ortholog is 100%.
Bootstrap support for H3GAU4 as seed ortholog is 100%.

Group of orthologs #122. Best score 674 bits
Score difference with first non-orthologous sequence - C.reinhardtii:674 P.ramorum:441

A8JH46              	100.00%		H3G9Y1              	100.00%
Bootstrap support for A8JH46 as seed ortholog is 100%.
Bootstrap support for H3G9Y1 as seed ortholog is 100%.

Group of orthologs #123. Best score 672 bits
Score difference with first non-orthologous sequence - C.reinhardtii:672 P.ramorum:672

A8IDE6              	100.00%		H3G8E9              	100.00%
Bootstrap support for A8IDE6 as seed ortholog is 100%.
Bootstrap support for H3G8E9 as seed ortholog is 100%.

Group of orthologs #124. Best score 671 bits
Score difference with first non-orthologous sequence - C.reinhardtii:376 P.ramorum:138

A8J7C8              	100.00%		H3G8G8              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 100%.
Bootstrap support for H3G8G8 as seed ortholog is 99%.

Group of orthologs #125. Best score 670 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:249

A8JAV1              	100.00%		H3G9B9              	100.00%
                    	       		H3G9B8              	28.26%
Bootstrap support for A8JAV1 as seed ortholog is 100%.
Bootstrap support for H3G9B9 as seed ortholog is 100%.

Group of orthologs #126. Best score 664 bits
Score difference with first non-orthologous sequence - C.reinhardtii:664 P.ramorum:664

A8IXY4              	100.00%		H3G8P1              	100.00%
A8IYW8              	69.98%		
Bootstrap support for A8IXY4 as seed ortholog is 100%.
Bootstrap support for H3G8P1 as seed ortholog is 100%.

Group of orthologs #127. Best score 661 bits
Score difference with first non-orthologous sequence - C.reinhardtii:661 P.ramorum:661

A8JH35              	100.00%		H3G747              	100.00%
Bootstrap support for A8JH35 as seed ortholog is 100%.
Bootstrap support for H3G747 as seed ortholog is 100%.

Group of orthologs #128. Best score 658 bits
Score difference with first non-orthologous sequence - C.reinhardtii:658 P.ramorum:658

A8JG07              	100.00%		H3GA05              	100.00%
Bootstrap support for A8JG07 as seed ortholog is 100%.
Bootstrap support for H3GA05 as seed ortholog is 100%.

Group of orthologs #129. Best score 656 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:559

A8IU68              	100.00%		H3GAQ3              	100.00%
                    	       		H3G7H0              	9.25%
                    	       		H3H8A2              	6.41%
Bootstrap support for A8IU68 as seed ortholog is 84%.
Bootstrap support for H3GAQ3 as seed ortholog is 100%.

Group of orthologs #130. Best score 653 bits
Score difference with first non-orthologous sequence - C.reinhardtii:564 P.ramorum:653

A8I232              	100.00%		H3G8J5              	100.00%
Bootstrap support for A8I232 as seed ortholog is 100%.
Bootstrap support for H3G8J5 as seed ortholog is 100%.

Group of orthologs #131. Best score 653 bits
Score difference with first non-orthologous sequence - C.reinhardtii:536 P.ramorum:475

A8IIS1              	100.00%		H3H2A5              	100.00%
Bootstrap support for A8IIS1 as seed ortholog is 100%.
Bootstrap support for H3H2A5 as seed ortholog is 100%.

Group of orthologs #132. Best score 652 bits
Score difference with first non-orthologous sequence - C.reinhardtii:652 P.ramorum:652

A8ICJ1              	100.00%		H3GAA1              	100.00%
Bootstrap support for A8ICJ1 as seed ortholog is 100%.
Bootstrap support for H3GAA1 as seed ortholog is 100%.

Group of orthologs #133. Best score 650 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.ramorum:230

A8J040              	100.00%		H3GCX9              	100.00%
Bootstrap support for A8J040 as seed ortholog is 100%.
Bootstrap support for H3GCX9 as seed ortholog is 99%.

Group of orthologs #134. Best score 649 bits
Score difference with first non-orthologous sequence - C.reinhardtii:649 P.ramorum:649

A8IVW3              	100.00%		H3H6L0              	100.00%
                    	       		H3G744              	34.79%
Bootstrap support for A8IVW3 as seed ortholog is 100%.
Bootstrap support for H3H6L0 as seed ortholog is 100%.

Group of orthologs #135. Best score 647 bits
Score difference with first non-orthologous sequence - C.reinhardtii:647 P.ramorum:647

A8JH37              	100.00%		H3GA72              	100.00%
Bootstrap support for A8JH37 as seed ortholog is 100%.
Bootstrap support for H3GA72 as seed ortholog is 100%.

Group of orthologs #136. Best score 646 bits
Score difference with first non-orthologous sequence - C.reinhardtii:462 P.ramorum:96

A7LGV1              	100.00%		H3GZK5              	100.00%
                    	       		H3G5B5              	7.91%
Bootstrap support for A7LGV1 as seed ortholog is 100%.
Bootstrap support for H3GZK5 as seed ortholog is 96%.

Group of orthologs #137. Best score 646 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:285

A8I7T1              	100.00%		H3GCK5              	100.00%
Bootstrap support for A8I7T1 as seed ortholog is 79%.
Bootstrap support for H3GCK5 as seed ortholog is 99%.

Group of orthologs #138. Best score 643 bits
Score difference with first non-orthologous sequence - C.reinhardtii:591 P.ramorum:539

A8IVI0              	100.00%		H3H1T8              	100.00%
Bootstrap support for A8IVI0 as seed ortholog is 100%.
Bootstrap support for H3H1T8 as seed ortholog is 100%.

Group of orthologs #139. Best score 642 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.ramorum:553

A8HPT4              	100.00%		H3GLF9              	100.00%
Bootstrap support for A8HPT4 as seed ortholog is 100%.
Bootstrap support for H3GLF9 as seed ortholog is 100%.

Group of orthologs #140. Best score 640 bits
Score difference with first non-orthologous sequence - C.reinhardtii:640 P.ramorum:640

A8IPW8              	100.00%		H3H3R6              	100.00%
Bootstrap support for A8IPW8 as seed ortholog is 100%.
Bootstrap support for H3H3R6 as seed ortholog is 100%.

Group of orthologs #141. Best score 639 bits
Score difference with first non-orthologous sequence - C.reinhardtii:639 P.ramorum:639

A8IDL8              	100.00%		H3G6I6              	100.00%
Bootstrap support for A8IDL8 as seed ortholog is 100%.
Bootstrap support for H3G6I6 as seed ortholog is 100%.

Group of orthologs #142. Best score 639 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:639

A8JGB2              	100.00%		H3G7A2              	100.00%
Bootstrap support for A8JGB2 as seed ortholog is 99%.
Bootstrap support for H3G7A2 as seed ortholog is 100%.

Group of orthologs #143. Best score 636 bits
Score difference with first non-orthologous sequence - C.reinhardtii:636 P.ramorum:50

A8J9S7              	100.00%		H3G9I7              	100.00%
Bootstrap support for A8J9S7 as seed ortholog is 100%.
Bootstrap support for H3G9I7 as seed ortholog is 94%.

Group of orthologs #144. Best score 636 bits
Score difference with first non-orthologous sequence - C.reinhardtii:636 P.ramorum:53

A8IRK2              	100.00%		H3GVL3              	100.00%
Bootstrap support for A8IRK2 as seed ortholog is 100%.
Bootstrap support for H3GVL3 as seed ortholog is 77%.

Group of orthologs #145. Best score 635 bits
Score difference with first non-orthologous sequence - C.reinhardtii:635 P.ramorum:465

A8JG58              	100.00%		H3G8E4              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for H3G8E4 as seed ortholog is 100%.

Group of orthologs #146. Best score 634 bits
Score difference with first non-orthologous sequence - C.reinhardtii:407 P.ramorum:458

A8JBN7              	100.00%		H3GA17              	100.00%
Bootstrap support for A8JBN7 as seed ortholog is 100%.
Bootstrap support for H3GA17 as seed ortholog is 100%.

Group of orthologs #147. Best score 633 bits
Score difference with first non-orthologous sequence - C.reinhardtii:633 P.ramorum:633

A8J3L1              	100.00%		H3GQP2              	100.00%
Bootstrap support for A8J3L1 as seed ortholog is 100%.
Bootstrap support for H3GQP2 as seed ortholog is 100%.

Group of orthologs #148. Best score 633 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:633

Q8W4V3              	100.00%		H3G967              	100.00%
Bootstrap support for Q8W4V3 as seed ortholog is 99%.
Bootstrap support for H3G967 as seed ortholog is 100%.

Group of orthologs #149. Best score 632 bits
Score difference with first non-orthologous sequence - C.reinhardtii:632 P.ramorum:632

A8ISQ5              	100.00%		H3GSY0              	100.00%
Bootstrap support for A8ISQ5 as seed ortholog is 100%.
Bootstrap support for H3GSY0 as seed ortholog is 100%.

Group of orthologs #150. Best score 629 bits
Score difference with first non-orthologous sequence - C.reinhardtii:431 P.ramorum:442

A8IT25              	100.00%		H3G996              	100.00%
Bootstrap support for A8IT25 as seed ortholog is 100%.
Bootstrap support for H3G996 as seed ortholog is 100%.

Group of orthologs #151. Best score 629 bits
Score difference with first non-orthologous sequence - C.reinhardtii:474 P.ramorum:545

A8J0A5              	100.00%		H3G9L6              	100.00%
Bootstrap support for A8J0A5 as seed ortholog is 100%.
Bootstrap support for H3G9L6 as seed ortholog is 100%.

Group of orthologs #152. Best score 629 bits
Score difference with first non-orthologous sequence - C.reinhardtii:560 P.ramorum:629

A8JE04              	100.00%		H3GA85              	100.00%
Bootstrap support for A8JE04 as seed ortholog is 100%.
Bootstrap support for H3GA85 as seed ortholog is 100%.

Group of orthologs #153. Best score 628 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 P.ramorum:272

A8J3N3              	100.00%		H3G7N9              	100.00%
Bootstrap support for A8J3N3 as seed ortholog is 100%.
Bootstrap support for H3G7N9 as seed ortholog is 100%.

Group of orthologs #154. Best score 628 bits
Score difference with first non-orthologous sequence - C.reinhardtii:628 P.ramorum:628

A8INS0              	100.00%		H3GP75              	100.00%
Bootstrap support for A8INS0 as seed ortholog is 100%.
Bootstrap support for H3GP75 as seed ortholog is 100%.

Group of orthologs #155. Best score 625 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:625

A8IMK1              	100.00%		H3G9C4              	100.00%
Bootstrap support for A8IMK1 as seed ortholog is 99%.
Bootstrap support for H3G9C4 as seed ortholog is 100%.

Group of orthologs #156. Best score 625 bits
Score difference with first non-orthologous sequence - C.reinhardtii:625 P.ramorum:540

A8J3M3              	100.00%		H3GQF9              	100.00%
Bootstrap support for A8J3M3 as seed ortholog is 100%.
Bootstrap support for H3GQF9 as seed ortholog is 100%.

Group of orthologs #157. Best score 624 bits
Score difference with first non-orthologous sequence - C.reinhardtii:624 P.ramorum:624

A8I793              	100.00%		H3G5P5              	100.00%
Bootstrap support for A8I793 as seed ortholog is 100%.
Bootstrap support for H3G5P5 as seed ortholog is 100%.

Group of orthologs #158. Best score 619 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.ramorum:619

A8HVM3              	100.00%		H3GR76              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 100%.
Bootstrap support for H3GR76 as seed ortholog is 100%.

Group of orthologs #159. Best score 612 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:249

A8HQA8              	100.00%		H3G9I9              	100.00%
Bootstrap support for A8HQA8 as seed ortholog is 100%.
Bootstrap support for H3G9I9 as seed ortholog is 100%.

Group of orthologs #160. Best score 611 bits
Score difference with first non-orthologous sequence - C.reinhardtii:611 P.ramorum:552

A8J5F7              	100.00%		H3G9Q8              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for H3G9Q8 as seed ortholog is 100%.

Group of orthologs #161. Best score 610 bits
Score difference with first non-orthologous sequence - C.reinhardtii:610 P.ramorum:610

A8JF63              	100.00%		H3G905              	100.00%
Bootstrap support for A8JF63 as seed ortholog is 100%.
Bootstrap support for H3G905 as seed ortholog is 100%.

Group of orthologs #162. Best score 609 bits
Score difference with first non-orthologous sequence - C.reinhardtii:609 P.ramorum:163

A8IAY6              	100.00%		H3GAC2              	100.00%
Bootstrap support for A8IAY6 as seed ortholog is 100%.
Bootstrap support for H3GAC2 as seed ortholog is 99%.

Group of orthologs #163. Best score 608 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:40

A8IHD9              	100.00%		H3G987              	100.00%
                    	       		H3G922              	7.59%
Bootstrap support for A8IHD9 as seed ortholog is 96%.
Bootstrap support for H3G987 as seed ortholog is 80%.

Group of orthologs #164. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 P.ramorum:218

A8JA42              	100.00%		H3G8C9              	100.00%
Bootstrap support for A8JA42 as seed ortholog is 100%.
Bootstrap support for H3G8C9 as seed ortholog is 99%.

Group of orthologs #165. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 P.ramorum:607

Q8VZZ5              	100.00%		H3G9F4              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for H3G9F4 as seed ortholog is 100%.

Group of orthologs #166. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 P.ramorum:302

A8IR41              	100.00%		H3HAM1              	100.00%
Bootstrap support for A8IR41 as seed ortholog is 100%.
Bootstrap support for H3HAM1 as seed ortholog is 100%.

Group of orthologs #167. Best score 606 bits
Score difference with first non-orthologous sequence - C.reinhardtii:606 P.ramorum:606

A8JHE3              	100.00%		H3GEH1              	100.00%
Bootstrap support for A8JHE3 as seed ortholog is 100%.
Bootstrap support for H3GEH1 as seed ortholog is 100%.

Group of orthologs #168. Best score 605 bits
Score difference with first non-orthologous sequence - C.reinhardtii:605 P.ramorum:287

Q6X898              	100.00%		H3G8X1              	100.00%
Bootstrap support for Q6X898 as seed ortholog is 100%.
Bootstrap support for H3G8X1 as seed ortholog is 100%.

Group of orthologs #169. Best score 604 bits
Score difference with first non-orthologous sequence - C.reinhardtii:604 P.ramorum:604

A8IAT4              	100.00%		H3HA86              	100.00%
Bootstrap support for A8IAT4 as seed ortholog is 100%.
Bootstrap support for H3HA86 as seed ortholog is 100%.

Group of orthologs #170. Best score 603 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.ramorum:603

A8HS40              	100.00%		H3GXS1              	100.00%
Bootstrap support for A8HS40 as seed ortholog is 100%.
Bootstrap support for H3GXS1 as seed ortholog is 100%.

Group of orthologs #171. Best score 600 bits
Score difference with first non-orthologous sequence - C.reinhardtii:458 P.ramorum:70

A8J9Q1              	100.00%		H3HDI7              	100.00%
Bootstrap support for A8J9Q1 as seed ortholog is 100%.
Bootstrap support for H3HDI7 as seed ortholog is 96%.

Group of orthologs #172. Best score 599 bits
Score difference with first non-orthologous sequence - C.reinhardtii:599 P.ramorum:508

A8HXM5              	100.00%		H3G6X3              	100.00%
                    	       		H3GAH5              	97.14%
Bootstrap support for A8HXM5 as seed ortholog is 100%.
Bootstrap support for H3G6X3 as seed ortholog is 100%.

Group of orthologs #173. Best score 594 bits
Score difference with first non-orthologous sequence - C.reinhardtii:594 P.ramorum:594

A8I0Z4              	100.00%		H3G9G8              	100.00%
Bootstrap support for A8I0Z4 as seed ortholog is 100%.
Bootstrap support for H3G9G8 as seed ortholog is 100%.

Group of orthologs #174. Best score 592 bits
Score difference with first non-orthologous sequence - C.reinhardtii:438 P.ramorum:238

A8J3L9              	100.00%		H3G873              	100.00%
Bootstrap support for A8J3L9 as seed ortholog is 100%.
Bootstrap support for H3G873 as seed ortholog is 100%.

Group of orthologs #175. Best score 586 bits
Score difference with first non-orthologous sequence - C.reinhardtii:586 P.ramorum:586

A8IST3              	100.00%		H3GUI9              	100.00%
A8J1K0              	36.98%		
A8J9X3              	23.86%		
Bootstrap support for A8IST3 as seed ortholog is 100%.
Bootstrap support for H3GUI9 as seed ortholog is 100%.

Group of orthologs #176. Best score 586 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:186

A8J6S4              	100.00%		H3GAS7              	100.00%
Bootstrap support for A8J6S4 as seed ortholog is 99%.
Bootstrap support for H3GAS7 as seed ortholog is 99%.

Group of orthologs #177. Best score 585 bits
Score difference with first non-orthologous sequence - C.reinhardtii:585 P.ramorum:338

A8IRU2              	100.00%		H3GLB1              	100.00%
Bootstrap support for A8IRU2 as seed ortholog is 100%.
Bootstrap support for H3GLB1 as seed ortholog is 99%.

Group of orthologs #178. Best score 584 bits
Score difference with first non-orthologous sequence - C.reinhardtii:584 P.ramorum:584

A8I9M8              	100.00%		H3G8B1              	100.00%
Bootstrap support for A8I9M8 as seed ortholog is 100%.
Bootstrap support for H3G8B1 as seed ortholog is 100%.

Group of orthologs #179. Best score 584 bits
Score difference with first non-orthologous sequence - C.reinhardtii:584 P.ramorum:584

A8IED9              	100.00%		H3G970              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for H3G970 as seed ortholog is 100%.

Group of orthologs #180. Best score 583 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:267

A8JAK4              	100.00%		H3G842              	100.00%
Bootstrap support for A8JAK4 as seed ortholog is 99%.
Bootstrap support for H3G842 as seed ortholog is 100%.

Group of orthologs #181. Best score 582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:68

A8J8K0              	100.00%		H3GWW2              	100.00%
                    	       		H3GED2              	32.52%
                    	       		H3GLV4              	9.43%
                    	       		H3H2D8              	9.00%
                    	       		H3HBR1              	8.74%
                    	       		H3H128              	6.36%
                    	       		H3GVD7              	5.99%
                    	       		H3GJS3              	5.35%
Bootstrap support for A8J8K0 as seed ortholog is 98%.
Bootstrap support for H3GWW2 as seed ortholog is 89%.

Group of orthologs #182. Best score 581 bits
Score difference with first non-orthologous sequence - C.reinhardtii:581 P.ramorum:581

A8JIR0              	100.00%		H3G6H0              	100.00%
                    	       		H3GA51              	43.06%
Bootstrap support for A8JIR0 as seed ortholog is 100%.
Bootstrap support for H3G6H0 as seed ortholog is 100%.

Group of orthologs #183. Best score 581 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:172

A8I985              	100.00%		H3GG43              	100.00%
Bootstrap support for A8I985 as seed ortholog is 99%.
Bootstrap support for H3GG43 as seed ortholog is 99%.

Group of orthologs #184. Best score 581 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:581

A8JFK4              	100.00%		H3GN18              	100.00%
Bootstrap support for A8JFK4 as seed ortholog is 97%.
Bootstrap support for H3GN18 as seed ortholog is 100%.

Group of orthologs #185. Best score 578 bits
Score difference with first non-orthologous sequence - C.reinhardtii:578 P.ramorum:578

A8I0G3              	100.00%		H3G6K6              	100.00%
Bootstrap support for A8I0G3 as seed ortholog is 100%.
Bootstrap support for H3G6K6 as seed ortholog is 100%.

Group of orthologs #186. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 P.ramorum:577

A8HN12              	100.00%		H3GL28              	100.00%
                    	       		H3GCG7              	76.99%
Bootstrap support for A8HN12 as seed ortholog is 100%.
Bootstrap support for H3GL28 as seed ortholog is 100%.

Group of orthologs #187. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 P.ramorum:400

Q8S4W6              	100.00%		H3G9R9              	100.00%
Bootstrap support for Q8S4W6 as seed ortholog is 100%.
Bootstrap support for H3G9R9 as seed ortholog is 100%.

Group of orthologs #188. Best score 575 bits
Score difference with first non-orthologous sequence - C.reinhardtii:575 P.ramorum:575

A8J8Z1              	100.00%		H3HD79              	100.00%
Bootstrap support for A8J8Z1 as seed ortholog is 100%.
Bootstrap support for H3HD79 as seed ortholog is 100%.

Group of orthologs #189. Best score 574 bits
Score difference with first non-orthologous sequence - C.reinhardtii:445 P.ramorum:266

A8IIP7              	100.00%		H3G8D8              	100.00%
Bootstrap support for A8IIP7 as seed ortholog is 100%.
Bootstrap support for H3G8D8 as seed ortholog is 100%.

Group of orthologs #190. Best score 574 bits
Score difference with first non-orthologous sequence - C.reinhardtii:574 P.ramorum:574

A8J5K4              	100.00%		H3G5Z0              	100.00%
Bootstrap support for A8J5K4 as seed ortholog is 100%.
Bootstrap support for H3G5Z0 as seed ortholog is 100%.

Group of orthologs #191. Best score 574 bits
Score difference with first non-orthologous sequence - C.reinhardtii:574 P.ramorum:574

A8JF35              	100.00%		H3G6S6              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for H3G6S6 as seed ortholog is 100%.

Group of orthologs #192. Best score 573 bits
Score difference with first non-orthologous sequence - C.reinhardtii:573 P.ramorum:573

A8ID84              	100.00%		H3G9A1              	100.00%
Bootstrap support for A8ID84 as seed ortholog is 100%.
Bootstrap support for H3G9A1 as seed ortholog is 100%.

Group of orthologs #193. Best score 571 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 P.ramorum:344

A8IBD5              	100.00%		H3G4Y9              	100.00%
Bootstrap support for A8IBD5 as seed ortholog is 100%.
Bootstrap support for H3G4Y9 as seed ortholog is 100%.

Group of orthologs #194. Best score 570 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.ramorum:375

A8J1T4              	100.00%		H3GAL9              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 100%.
Bootstrap support for H3GAL9 as seed ortholog is 100%.

Group of orthologs #195. Best score 569 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.ramorum:309

A8JCM3              	100.00%		H3GH04              	100.00%
Bootstrap support for A8JCM3 as seed ortholog is 100%.
Bootstrap support for H3GH04 as seed ortholog is 100%.

Group of orthologs #196. Best score 568 bits
Score difference with first non-orthologous sequence - C.reinhardtii:568 P.ramorum:568

A8IF08              	100.00%		H3G986              	100.00%
Bootstrap support for A8IF08 as seed ortholog is 100%.
Bootstrap support for H3G986 as seed ortholog is 100%.

Group of orthologs #197. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:567 P.ramorum:352

A8HSS0              	100.00%		H3G9J0              	100.00%
Bootstrap support for A8HSS0 as seed ortholog is 100%.
Bootstrap support for H3G9J0 as seed ortholog is 100%.

Group of orthologs #198. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:567 P.ramorum:23

A8JH98              	100.00%		H3GAG9              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for H3GAG9 as seed ortholog is 70%.
Alternative seed ortholog is H3GAT5 (23 bits away from this cluster)

Group of orthologs #199. Best score 562 bits
Score difference with first non-orthologous sequence - C.reinhardtii:562 P.ramorum:562

A8ID74              	100.00%		H3G5N2              	100.00%
Bootstrap support for A8ID74 as seed ortholog is 100%.
Bootstrap support for H3G5N2 as seed ortholog is 100%.

Group of orthologs #200. Best score 561 bits
Score difference with first non-orthologous sequence - C.reinhardtii:561 P.ramorum:273

A8IID0              	100.00%		H3G8P9              	100.00%
Bootstrap support for A8IID0 as seed ortholog is 100%.
Bootstrap support for H3G8P9 as seed ortholog is 100%.

Group of orthologs #201. Best score 561 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 P.ramorum:373

A8IP17              	100.00%		H3G926              	100.00%
Bootstrap support for A8IP17 as seed ortholog is 100%.
Bootstrap support for H3G926 as seed ortholog is 100%.

Group of orthologs #202. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 P.ramorum:336

A8J0X7              	100.00%		H3G6I7              	100.00%
Bootstrap support for A8J0X7 as seed ortholog is 100%.
Bootstrap support for H3G6I7 as seed ortholog is 100%.

Group of orthologs #203. Best score 559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:338 P.ramorum:190

A8IJ19              	100.00%		H3G5S9              	100.00%
                    	       		H3G8I3              	100.00%
                    	       		H3G8I2              	87.94%
                    	       		H3G8I6              	67.75%
                    	       		H3H3Z3              	46.08%
Bootstrap support for A8IJ19 as seed ortholog is 100%.
Bootstrap support for H3G5S9 as seed ortholog is 100%.
Bootstrap support for H3G8I3 as seed ortholog is 100%.

Group of orthologs #204. Best score 557 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.ramorum:557

A8J914              	100.00%		H3G8W2              	100.00%
A2PZC3              	89.85%		
A8IVU2              	6.93%		
Bootstrap support for A8J914 as seed ortholog is 100%.
Bootstrap support for H3G8W2 as seed ortholog is 100%.

Group of orthologs #205. Best score 557 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.ramorum:490

A8IBN3              	100.00%		H3GKZ2              	100.00%
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for H3GKZ2 as seed ortholog is 100%.

Group of orthologs #206. Best score 557 bits
Score difference with first non-orthologous sequence - C.reinhardtii:557 P.ramorum:378

A8I175              	100.00%		H3H0Z5              	100.00%
Bootstrap support for A8I175 as seed ortholog is 100%.
Bootstrap support for H3H0Z5 as seed ortholog is 100%.

Group of orthologs #207. Best score 556 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.ramorum:142

A8J979              	100.00%		H3G5D6              	100.00%
Bootstrap support for A8J979 as seed ortholog is 100%.
Bootstrap support for H3G5D6 as seed ortholog is 99%.

Group of orthologs #208. Best score 555 bits
Score difference with first non-orthologous sequence - C.reinhardtii:481 P.ramorum:492

A8J5R1              	100.00%		H3G6T4              	100.00%
                    	       		H3GQ77              	26.84%
Bootstrap support for A8J5R1 as seed ortholog is 100%.
Bootstrap support for H3G6T4 as seed ortholog is 100%.

Group of orthologs #209. Best score 555 bits
Score difference with first non-orthologous sequence - C.reinhardtii:555 P.ramorum:555

A8HYU5              	100.00%		H3GA19              	100.00%
Bootstrap support for A8HYU5 as seed ortholog is 100%.
Bootstrap support for H3GA19 as seed ortholog is 100%.

Group of orthologs #210. Best score 553 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.ramorum:434

A8I675              	100.00%		H3G649              	100.00%
                    	       		H3HAD9              	6.32%
Bootstrap support for A8I675 as seed ortholog is 100%.
Bootstrap support for H3G649 as seed ortholog is 100%.

Group of orthologs #211. Best score 551 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 P.ramorum:433

A8JEQ4              	100.00%		H3GFR1              	100.00%
                    	       		H3GPP5              	11.16%
Bootstrap support for A8JEQ4 as seed ortholog is 100%.
Bootstrap support for H3GFR1 as seed ortholog is 100%.

Group of orthologs #212. Best score 551 bits
Score difference with first non-orthologous sequence - C.reinhardtii:551 P.ramorum:551

A8I7H0              	100.00%		H3G8W1              	100.00%
Bootstrap support for A8I7H0 as seed ortholog is 100%.
Bootstrap support for H3G8W1 as seed ortholog is 100%.

Group of orthologs #213. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:550 P.ramorum:550

A8I8X8              	100.00%		H3GA27              	100.00%
Bootstrap support for A8I8X8 as seed ortholog is 100%.
Bootstrap support for H3GA27 as seed ortholog is 100%.

Group of orthologs #214. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:550 P.ramorum:99

A8IWJ5              	100.00%		H3G8N3              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 100%.
Bootstrap support for H3G8N3 as seed ortholog is 99%.

Group of orthologs #215. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:474 P.ramorum:116

A8J709              	100.00%		H3GAR9              	100.00%
Bootstrap support for A8J709 as seed ortholog is 100%.
Bootstrap support for H3GAR9 as seed ortholog is 99%.

Group of orthologs #216. Best score 547 bits
Score difference with first non-orthologous sequence - C.reinhardtii:547 P.ramorum:547

A8HZ26              	100.00%		H3HC97              	100.00%
Bootstrap support for A8HZ26 as seed ortholog is 100%.
Bootstrap support for H3HC97 as seed ortholog is 100%.

Group of orthologs #217. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:545 P.ramorum:545

A8HPZ4              	100.00%		H3G7X1              	100.00%
Bootstrap support for A8HPZ4 as seed ortholog is 100%.
Bootstrap support for H3G7X1 as seed ortholog is 100%.

Group of orthologs #218. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:460

A8JAY4              	100.00%		H3G8Y0              	100.00%
Bootstrap support for A8JAY4 as seed ortholog is 86%.
Bootstrap support for H3G8Y0 as seed ortholog is 100%.

Group of orthologs #219. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:341

A8IJV1              	100.00%		H3GTT0              	100.00%
Bootstrap support for A8IJV1 as seed ortholog is 100%.
Bootstrap support for H3GTT0 as seed ortholog is 100%.

Group of orthologs #220. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.ramorum:362

A8JCJ9              	100.00%		H3GIT5              	100.00%
Bootstrap support for A8JCJ9 as seed ortholog is 100%.
Bootstrap support for H3GIT5 as seed ortholog is 100%.

Group of orthologs #221. Best score 544 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:398

A8IE89              	100.00%		H3G5E1              	100.00%
Bootstrap support for A8IE89 as seed ortholog is 100%.
Bootstrap support for H3G5E1 as seed ortholog is 100%.

Group of orthologs #222. Best score 544 bits
Score difference with first non-orthologous sequence - C.reinhardtii:316 P.ramorum:118

Q9XGU3              	100.00%		H3GAS5              	100.00%
Bootstrap support for Q9XGU3 as seed ortholog is 100%.
Bootstrap support for H3GAS5 as seed ortholog is 100%.

Group of orthologs #223. Best score 543 bits
Score difference with first non-orthologous sequence - C.reinhardtii:543 P.ramorum:543

A8IQE0              	100.00%		H3H5S2              	100.00%
                    	       		H3H4F0              	61.81%
Bootstrap support for A8IQE0 as seed ortholog is 100%.
Bootstrap support for H3H5S2 as seed ortholog is 100%.

Group of orthologs #224. Best score 543 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 P.ramorum:139

A8JC09              	100.00%		H3GA43              	100.00%
Bootstrap support for A8JC09 as seed ortholog is 100%.
Bootstrap support for H3GA43 as seed ortholog is 99%.

Group of orthologs #225. Best score 542 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:109

A8J829              	100.00%		H3G910              	100.00%
                    	       		H3GCI6              	60.37%
Bootstrap support for A8J829 as seed ortholog is 75%.
Bootstrap support for H3G910 as seed ortholog is 95%.

Group of orthologs #226. Best score 542 bits
Score difference with first non-orthologous sequence - C.reinhardtii:542 P.ramorum:542

A8JD96              	100.00%		H3GWN7              	100.00%
Bootstrap support for A8JD96 as seed ortholog is 100%.
Bootstrap support for H3GWN7 as seed ortholog is 100%.

Group of orthologs #227. Best score 541 bits
Score difference with first non-orthologous sequence - C.reinhardtii:541 P.ramorum:541

A8HT27              	100.00%		H3GJ71              	100.00%
A8IWZ7              	13.37%		H3GIY5              	6.15%
                    	       		H3GIY6              	5.59%
Bootstrap support for A8HT27 as seed ortholog is 100%.
Bootstrap support for H3GJ71 as seed ortholog is 100%.

Group of orthologs #228. Best score 541 bits
Score difference with first non-orthologous sequence - C.reinhardtii:541 P.ramorum:541

A8IPH5              	100.00%		H3GAS2              	100.00%
Bootstrap support for A8IPH5 as seed ortholog is 100%.
Bootstrap support for H3GAS2 as seed ortholog is 100%.

Group of orthologs #229. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:403 P.ramorum:540

A8JFR4              	100.00%		H3G9P9              	100.00%
                    	       		H3GB14              	100.00%
Bootstrap support for A8JFR4 as seed ortholog is 100%.
Bootstrap support for H3G9P9 as seed ortholog is 100%.
Bootstrap support for H3GB14 as seed ortholog is 100%.

Group of orthologs #230. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:540 P.ramorum:540

A8I6G3              	100.00%		H3GGH5              	100.00%
Bootstrap support for A8I6G3 as seed ortholog is 100%.
Bootstrap support for H3GGH5 as seed ortholog is 100%.

Group of orthologs #231. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:540 P.ramorum:483

A8IYF1              	100.00%		H3G787              	100.00%
Bootstrap support for A8IYF1 as seed ortholog is 100%.
Bootstrap support for H3G787 as seed ortholog is 100%.

Group of orthologs #232. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:539 P.ramorum:539

A8I093              	100.00%		H3G5V5              	100.00%
Bootstrap support for A8I093 as seed ortholog is 100%.
Bootstrap support for H3G5V5 as seed ortholog is 100%.

Group of orthologs #233. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:472

A8HXR2              	100.00%		H3G8R2              	100.00%
Bootstrap support for A8HXR2 as seed ortholog is 72%.
Alternative seed ortholog is P17746 (19 bits away from this cluster)
Bootstrap support for H3G8R2 as seed ortholog is 100%.

Group of orthologs #234. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.ramorum:391

A8JIJ1              	100.00%		H3G9Z6              	100.00%
Bootstrap support for A8JIJ1 as seed ortholog is 100%.
Bootstrap support for H3G9Z6 as seed ortholog is 100%.

Group of orthologs #235. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.ramorum:288

A8IWA5              	100.00%		H3GWG5              	100.00%
Bootstrap support for A8IWA5 as seed ortholog is 100%.
Bootstrap support for H3GWG5 as seed ortholog is 100%.

Group of orthologs #236. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:539 P.ramorum:539

A8J5T5              	100.00%		H3GVL6              	100.00%
Bootstrap support for A8J5T5 as seed ortholog is 100%.
Bootstrap support for H3GVL6 as seed ortholog is 100%.

Group of orthologs #237. Best score 538 bits
Score difference with first non-orthologous sequence - C.reinhardtii:538 P.ramorum:39

A8J940              	100.00%		H3G870              	100.00%
Bootstrap support for A8J940 as seed ortholog is 100%.
Bootstrap support for H3G870 as seed ortholog is 84%.

Group of orthologs #238. Best score 536 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.ramorum:177

A8JC04              	100.00%		H3G9R1              	100.00%
Bootstrap support for A8JC04 as seed ortholog is 100%.
Bootstrap support for H3G9R1 as seed ortholog is 100%.

Group of orthologs #239. Best score 535 bits
Score difference with first non-orthologous sequence - C.reinhardtii:535 P.ramorum:535

A8IWV0              	100.00%		H3G7L1              	100.00%
Bootstrap support for A8IWV0 as seed ortholog is 100%.
Bootstrap support for H3G7L1 as seed ortholog is 100%.

Group of orthologs #240. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 P.ramorum:39

A8IA39              	100.00%		H3G9L2              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for H3G9L2 as seed ortholog is 77%.

Group of orthologs #241. Best score 533 bits
Score difference with first non-orthologous sequence - C.reinhardtii:533 P.ramorum:533

Q70ZL8              	100.00%		H3G6L3              	100.00%
A8J0K1              	54.93%		H3G8A0              	91.56%
Bootstrap support for Q70ZL8 as seed ortholog is 100%.
Bootstrap support for H3G6L3 as seed ortholog is 100%.

Group of orthologs #242. Best score 533 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 P.ramorum:533

A8I7S0              	100.00%		H3GM71              	100.00%
Bootstrap support for A8I7S0 as seed ortholog is 100%.
Bootstrap support for H3GM71 as seed ortholog is 100%.

Group of orthologs #243. Best score 533 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.ramorum:436

A8JGK6              	100.00%		H3G835              	100.00%
Bootstrap support for A8JGK6 as seed ortholog is 100%.
Bootstrap support for H3G835 as seed ortholog is 100%.

Group of orthologs #244. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:532 P.ramorum:279

A8HXA2              	100.00%		H3G9G0              	100.00%
Bootstrap support for A8HXA2 as seed ortholog is 100%.
Bootstrap support for H3G9G0 as seed ortholog is 100%.

Group of orthologs #245. Best score 531 bits
Score difference with first non-orthologous sequence - C.reinhardtii:531 P.ramorum:143

A8JAP7              	100.00%		H3G9N6              	100.00%
Bootstrap support for A8JAP7 as seed ortholog is 100%.
Bootstrap support for H3G9N6 as seed ortholog is 99%.

Group of orthologs #246. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:449

A8HZZ4              	100.00%		H3G9Z7              	100.00%
                    	       		H3G9Z8              	95.27%
Bootstrap support for A8HZZ4 as seed ortholog is 100%.
Bootstrap support for H3G9Z7 as seed ortholog is 100%.

Group of orthologs #247. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:530 P.ramorum:132

A8JDN1              	100.00%		H3HDB5              	100.00%
Bootstrap support for A8JDN1 as seed ortholog is 100%.
Bootstrap support for H3HDB5 as seed ortholog is 100%.

Group of orthologs #248. Best score 529 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 P.ramorum:529

A8JHC9              	100.00%		H3G951              	100.00%
Bootstrap support for A8JHC9 as seed ortholog is 100%.
Bootstrap support for H3G951 as seed ortholog is 100%.

Group of orthologs #249. Best score 529 bits
Score difference with first non-orthologous sequence - C.reinhardtii:529 P.ramorum:254

A8J387              	100.00%		H3H5G2              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for H3H5G2 as seed ortholog is 100%.

Group of orthologs #250. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 P.ramorum:408

A8HME6              	100.00%		H3GAU6              	100.00%
Bootstrap support for A8HME6 as seed ortholog is 100%.
Bootstrap support for H3GAU6 as seed ortholog is 100%.

Group of orthologs #251. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:527 P.ramorum:527

A8HPT8              	100.00%		H3G9K7              	100.00%
Bootstrap support for A8HPT8 as seed ortholog is 100%.
Bootstrap support for H3G9K7 as seed ortholog is 100%.

Group of orthologs #252. Best score 524 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:263

A8IBY2              	100.00%		H3G780              	100.00%
Bootstrap support for A8IBY2 as seed ortholog is 100%.
Bootstrap support for H3G780 as seed ortholog is 100%.

Group of orthologs #253. Best score 522 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 P.ramorum:435

A8J4L1              	100.00%		H3G7J9              	100.00%
Bootstrap support for A8J4L1 as seed ortholog is 100%.
Bootstrap support for H3G7J9 as seed ortholog is 100%.

Group of orthologs #254. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:520

A8HWC2              	100.00%		H3GFN8              	100.00%
Bootstrap support for A8HWC2 as seed ortholog is 99%.
Bootstrap support for H3GFN8 as seed ortholog is 100%.

Group of orthologs #255. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:520 P.ramorum:520

A8J168              	100.00%		H3GA76              	100.00%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for H3GA76 as seed ortholog is 100%.

Group of orthologs #256. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:243

A8IV98              	100.00%		H3G5S8              	100.00%
Bootstrap support for A8IV98 as seed ortholog is 100%.
Bootstrap support for H3G5S8 as seed ortholog is 100%.

Group of orthologs #257. Best score 513 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:372

A8JF80              	100.00%		H3GAE2              	100.00%
Bootstrap support for A8JF80 as seed ortholog is 99%.
Bootstrap support for H3GAE2 as seed ortholog is 100%.

Group of orthologs #258. Best score 511 bits
Score difference with first non-orthologous sequence - C.reinhardtii:511 P.ramorum:511

A8IZZ9              	100.00%		H3GP50              	100.00%
A8IQQ1              	29.08%		H3GP49              	75.86%
Bootstrap support for A8IZZ9 as seed ortholog is 100%.
Bootstrap support for H3GP50 as seed ortholog is 100%.

Group of orthologs #259. Best score 511 bits
Score difference with first non-orthologous sequence - C.reinhardtii:511 P.ramorum:511

A8HQU3              	100.00%		H3GCM9              	100.00%
Bootstrap support for A8HQU3 as seed ortholog is 100%.
Bootstrap support for H3GCM9 as seed ortholog is 100%.

Group of orthologs #260. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 P.ramorum:173

A8JAX9              	100.00%		H3GAS0              	100.00%
                    	       		H3G8Q4              	96.03%
Bootstrap support for A8JAX9 as seed ortholog is 100%.
Bootstrap support for H3GAS0 as seed ortholog is 99%.

Group of orthologs #261. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:510 P.ramorum:510

A8JES3              	100.00%		H3G764              	100.00%
                    	       		H3G9R8              	79.24%
Bootstrap support for A8JES3 as seed ortholog is 100%.
Bootstrap support for H3G764 as seed ortholog is 100%.

Group of orthologs #262. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:510 P.ramorum:39

A8J7G2              	100.00%		H3GJ31              	100.00%
Bootstrap support for A8J7G2 as seed ortholog is 100%.
Bootstrap support for H3GJ31 as seed ortholog is 56%.
Alternative seed ortholog is H3GEV6 (39 bits away from this cluster)

Group of orthologs #263. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 P.ramorum:507

A8HYH7              	100.00%		H3GAY8              	100.00%
Bootstrap support for A8HYH7 as seed ortholog is 100%.
Bootstrap support for H3GAY8 as seed ortholog is 100%.

Group of orthologs #264. Best score 504 bits
Score difference with first non-orthologous sequence - C.reinhardtii:504 P.ramorum:292

A8IHM8              	100.00%		H3GA00              	100.00%
Bootstrap support for A8IHM8 as seed ortholog is 100%.
Bootstrap support for H3GA00 as seed ortholog is 100%.

Group of orthologs #265. Best score 504 bits
Score difference with first non-orthologous sequence - C.reinhardtii:504 P.ramorum:504

A8IUI9              	100.00%		H3G5B1              	100.00%
Bootstrap support for A8IUI9 as seed ortholog is 100%.
Bootstrap support for H3G5B1 as seed ortholog is 100%.

Group of orthologs #266. Best score 503 bits
Score difference with first non-orthologous sequence - C.reinhardtii:421 P.ramorum:372

A8IYG8              	100.00%		H3HDS0              	100.00%
Bootstrap support for A8IYG8 as seed ortholog is 100%.
Bootstrap support for H3HDS0 as seed ortholog is 100%.

Group of orthologs #267. Best score 502 bits
Score difference with first non-orthologous sequence - C.reinhardtii:502 P.ramorum:502

A8IJJ8              	100.00%		H3G5G0              	100.00%
Bootstrap support for A8IJJ8 as seed ortholog is 100%.
Bootstrap support for H3G5G0 as seed ortholog is 100%.

Group of orthologs #268. Best score 500 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 P.ramorum:500

A8JH25              	100.00%		H3G5C8              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 100%.
Bootstrap support for H3G5C8 as seed ortholog is 100%.

Group of orthologs #269. Best score 499 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:31

A8JBP0              	100.00%		H3G8L9              	100.00%
Bootstrap support for A8JBP0 as seed ortholog is 99%.
Bootstrap support for H3G8L9 as seed ortholog is 86%.

Group of orthologs #270. Best score 499 bits
Score difference with first non-orthologous sequence - C.reinhardtii:328 P.ramorum:275

A8ICS4              	100.00%		H3GVG1              	100.00%
Bootstrap support for A8ICS4 as seed ortholog is 100%.
Bootstrap support for H3GVG1 as seed ortholog is 100%.

Group of orthologs #271. Best score 498 bits
Score difference with first non-orthologous sequence - C.reinhardtii:498 P.ramorum:498

A8J462              	100.00%		H3G5C1              	100.00%
Bootstrap support for A8J462 as seed ortholog is 100%.
Bootstrap support for H3G5C1 as seed ortholog is 100%.

Group of orthologs #272. Best score 497 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.ramorum:297

A8J3G7              	100.00%		H3G8C8              	100.00%
                    	       		H3GAP9              	55.48%
Bootstrap support for A8J3G7 as seed ortholog is 100%.
Bootstrap support for H3G8C8 as seed ortholog is 100%.

Group of orthologs #273. Best score 496 bits
Score difference with first non-orthologous sequence - C.reinhardtii:496 P.ramorum:496

A8HRS5              	100.00%		H3G862              	100.00%
Bootstrap support for A8HRS5 as seed ortholog is 100%.
Bootstrap support for H3G862 as seed ortholog is 100%.

Group of orthologs #274. Best score 496 bits
Score difference with first non-orthologous sequence - C.reinhardtii:496 P.ramorum:496

A8IT31              	100.00%		H3GA10              	100.00%
Bootstrap support for A8IT31 as seed ortholog is 100%.
Bootstrap support for H3GA10 as seed ortholog is 100%.

Group of orthologs #275. Best score 492 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:167

A8HM74              	100.00%		H3G828              	100.00%
Bootstrap support for A8HM74 as seed ortholog is 100%.
Bootstrap support for H3G828 as seed ortholog is 100%.

Group of orthologs #276. Best score 491 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.ramorum:246

A8JB11              	100.00%		H3G9R4              	100.00%
Bootstrap support for A8JB11 as seed ortholog is 100%.
Bootstrap support for H3G9R4 as seed ortholog is 100%.

Group of orthologs #277. Best score 490 bits
Score difference with first non-orthologous sequence - C.reinhardtii:490 P.ramorum:490

A8IFZ9              	100.00%		H3G8V9              	100.00%
Bootstrap support for A8IFZ9 as seed ortholog is 100%.
Bootstrap support for H3G8V9 as seed ortholog is 100%.

Group of orthologs #278. Best score 489 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.ramorum:99

A8HQY2              	100.00%		H3G566              	100.00%
Bootstrap support for A8HQY2 as seed ortholog is 100%.
Bootstrap support for H3G566 as seed ortholog is 98%.

Group of orthologs #279. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:488 P.ramorum:488

A8J9E6              	100.00%		H3G8V7              	100.00%
                    	       		H3G5G8              	45.56%
Bootstrap support for A8J9E6 as seed ortholog is 100%.
Bootstrap support for H3G8V7 as seed ortholog is 100%.

Group of orthologs #280. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.ramorum:225

A8HPC8              	100.00%		H3G9Y6              	100.00%
Bootstrap support for A8HPC8 as seed ortholog is 100%.
Bootstrap support for H3G9Y6 as seed ortholog is 100%.

Group of orthologs #281. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 P.ramorum:488

A8J280              	100.00%		H3G5C7              	100.00%
Bootstrap support for A8J280 as seed ortholog is 100%.
Bootstrap support for H3G5C7 as seed ortholog is 100%.

Group of orthologs #282. Best score 487 bits
Score difference with first non-orthologous sequence - C.reinhardtii:487 P.ramorum:49

A8HS05              	100.00%		H3G9K6              	100.00%
Bootstrap support for A8HS05 as seed ortholog is 100%.
Bootstrap support for H3G9K6 as seed ortholog is 89%.

Group of orthologs #283. Best score 486 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 P.ramorum:486

A8IJZ3              	100.00%		H3GAA7              	100.00%
Bootstrap support for A8IJZ3 as seed ortholog is 100%.
Bootstrap support for H3GAA7 as seed ortholog is 100%.

Group of orthologs #284. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.ramorum:349

A8J448              	100.00%		H3G7D3              	100.00%
Bootstrap support for A8J448 as seed ortholog is 100%.
Bootstrap support for H3G7D3 as seed ortholog is 100%.

Group of orthologs #285. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 P.ramorum:391

A8J8Y1              	100.00%		H3G5G7              	100.00%
Bootstrap support for A8J8Y1 as seed ortholog is 100%.
Bootstrap support for H3G5G7 as seed ortholog is 100%.

Group of orthologs #286. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 P.ramorum:89

A8J1D2              	100.00%		H3GU12              	100.00%
                    	       		H3H4C0              	18.84%
Bootstrap support for A8J1D2 as seed ortholog is 100%.
Bootstrap support for H3GU12 as seed ortholog is 90%.

Group of orthologs #287. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 P.ramorum:480

A8IRK7              	100.00%		H3GM44              	100.00%
Bootstrap support for A8IRK7 as seed ortholog is 100%.
Bootstrap support for H3GM44 as seed ortholog is 100%.

Group of orthologs #288. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.ramorum:248

A8J3P5              	100.00%		H3GY14              	100.00%
Bootstrap support for A8J3P5 as seed ortholog is 99%.
Bootstrap support for H3GY14 as seed ortholog is 100%.

Group of orthologs #289. Best score 475 bits
Score difference with first non-orthologous sequence - C.reinhardtii:405 P.ramorum:369

A8J1X8              	100.00%		H3G8K3              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 100%.
Bootstrap support for H3G8K3 as seed ortholog is 100%.

Group of orthologs #290. Best score 474 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.ramorum:271

A8J122              	100.00%		H3G8M9              	100.00%
Bootstrap support for A8J122 as seed ortholog is 100%.
Bootstrap support for H3G8M9 as seed ortholog is 100%.

Group of orthologs #291. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:472 P.ramorum:472

A8IW34              	100.00%		H3GV61              	100.00%
                    	       		H3G7E1              	53.58%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for H3GV61 as seed ortholog is 100%.

Group of orthologs #292. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.ramorum:472

A8HS79              	100.00%		H3G9L9              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 100%.
Bootstrap support for H3G9L9 as seed ortholog is 100%.

Group of orthologs #293. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:472 P.ramorum:2

A8JJ39              	100.00%		H3G8Z8              	100.00%
Bootstrap support for A8JJ39 as seed ortholog is 100%.
Bootstrap support for H3G8Z8 as seed ortholog is 48%.
Alternative seed ortholog is H3GA36 (2 bits away from this cluster)

Group of orthologs #294. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:472 P.ramorum:472

Q84UB2              	100.00%		H3GA45              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for H3GA45 as seed ortholog is 100%.

Group of orthologs #295. Best score 471 bits
Score difference with first non-orthologous sequence - C.reinhardtii:471 P.ramorum:367

A8J146              	100.00%		H3GAL0              	100.00%
Bootstrap support for A8J146 as seed ortholog is 100%.
Bootstrap support for H3GAL0 as seed ortholog is 100%.

Group of orthologs #296. Best score 471 bits
Score difference with first non-orthologous sequence - C.reinhardtii:471 P.ramorum:471

A8J5P7              	100.00%		H3G847              	100.00%
Bootstrap support for A8J5P7 as seed ortholog is 100%.
Bootstrap support for H3G847 as seed ortholog is 100%.

Group of orthologs #297. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:470

A8J6K6              	100.00%		H3GAE1              	100.00%
Bootstrap support for A8J6K6 as seed ortholog is 99%.
Bootstrap support for H3GAE1 as seed ortholog is 100%.

Group of orthologs #298. Best score 468 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:104

A8IVR6              	100.00%		H3GAP1              	100.00%
                    	       		H3GAQ6              	84.49%
                    	       		H3H2B2              	71.63%
                    	       		H3GAQ9              	71.22%
                    	       		H3H2B4              	71.22%
Bootstrap support for A8IVR6 as seed ortholog is 99%.
Bootstrap support for H3GAP1 as seed ortholog is 98%.

Group of orthologs #299. Best score 468 bits
Score difference with first non-orthologous sequence - C.reinhardtii:468 P.ramorum:468

A8J9T2              	100.00%		H3GEL6              	100.00%
Bootstrap support for A8J9T2 as seed ortholog is 100%.
Bootstrap support for H3GEL6 as seed ortholog is 100%.

Group of orthologs #300. Best score 468 bits
Score difference with first non-orthologous sequence - C.reinhardtii:468 P.ramorum:288

A8ILK1              	100.00%		H3GYF7              	100.00%
Bootstrap support for A8ILK1 as seed ortholog is 100%.
Bootstrap support for H3GYF7 as seed ortholog is 100%.

Group of orthologs #301. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 P.ramorum:467

A8J5U1              	100.00%		H3GKE7              	100.00%
                    	       		H3HAI9              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for H3GKE7 as seed ortholog is 100%.
Bootstrap support for H3HAI9 as seed ortholog is 100%.

Group of orthologs #302. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 P.ramorum:408

A8HPU4              	100.00%		H3GC09              	100.00%
Bootstrap support for A8HPU4 as seed ortholog is 100%.
Bootstrap support for H3GC09 as seed ortholog is 100%.

Group of orthologs #303. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 P.ramorum:467

A8IDM1              	100.00%		H3G762              	100.00%
Bootstrap support for A8IDM1 as seed ortholog is 100%.
Bootstrap support for H3G762 as seed ortholog is 100%.

Group of orthologs #304. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 P.ramorum:467

A8IJG8              	100.00%		H3GQY6              	100.00%
Bootstrap support for A8IJG8 as seed ortholog is 100%.
Bootstrap support for H3GQY6 as seed ortholog is 100%.

Group of orthologs #305. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:465 P.ramorum:465

A8HPR5              	100.00%		H3G4Y5              	100.00%
A8J484              	26.40%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for H3G4Y5 as seed ortholog is 100%.

Group of orthologs #306. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:465 P.ramorum:465

A8IA86              	100.00%		H3G947              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for H3G947 as seed ortholog is 100%.

Group of orthologs #307. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.ramorum:272

A8ITK3              	100.00%		H3G7L4              	100.00%
Bootstrap support for A8ITK3 as seed ortholog is 100%.
Bootstrap support for H3G7L4 as seed ortholog is 100%.

Group of orthologs #308. Best score 464 bits
Score difference with first non-orthologous sequence - C.reinhardtii:464 P.ramorum:464

A8IZ74              	100.00%		H3GPA7              	100.00%
Bootstrap support for A8IZ74 as seed ortholog is 100%.
Bootstrap support for H3GPA7 as seed ortholog is 100%.

Group of orthologs #309. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.ramorum:99

A8IMP0              	100.00%		H3G9N8              	100.00%
Bootstrap support for A8IMP0 as seed ortholog is 100%.
Bootstrap support for H3G9N8 as seed ortholog is 99%.

Group of orthologs #310. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:463 P.ramorum:463

A8IW43              	100.00%		H3HCN3              	100.00%
Bootstrap support for A8IW43 as seed ortholog is 100%.
Bootstrap support for H3HCN3 as seed ortholog is 100%.

Group of orthologs #311. Best score 462 bits
Score difference with first non-orthologous sequence - C.reinhardtii:462 P.ramorum:462

A8J0I0              	100.00%		H3G6Y2              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for H3G6Y2 as seed ortholog is 100%.

Group of orthologs #312. Best score 461 bits
Score difference with first non-orthologous sequence - C.reinhardtii:395 P.ramorum:395

A8IY20              	100.00%		H3GAC1              	100.00%
Bootstrap support for A8IY20 as seed ortholog is 100%.
Bootstrap support for H3GAC1 as seed ortholog is 100%.

Group of orthologs #313. Best score 460 bits
Score difference with first non-orthologous sequence - C.reinhardtii:460 P.ramorum:121

A8HUI3              	100.00%		H3G7C3              	100.00%
                    	       		H3GUW2              	52.19%
Bootstrap support for A8HUI3 as seed ortholog is 100%.
Bootstrap support for H3G7C3 as seed ortholog is 98%.

Group of orthologs #314. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:458 P.ramorum:458

A8IBR6              	100.00%		H3GAI9              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for H3GAI9 as seed ortholog is 100%.

Group of orthologs #315. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:392 P.ramorum:267

A8J3F9              	100.00%		H3GA81              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 100%.
Bootstrap support for H3GA81 as seed ortholog is 100%.

Group of orthologs #316. Best score 457 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.ramorum:277

A8JBC7              	100.00%		H3G928              	100.00%
Bootstrap support for A8JBC7 as seed ortholog is 100%.
Bootstrap support for H3G928 as seed ortholog is 100%.

Group of orthologs #317. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:456 P.ramorum:456

A8HYQ1              	100.00%		H3GA60              	100.00%
                    	       		H3GXA3              	26.81%
Bootstrap support for A8HYQ1 as seed ortholog is 100%.
Bootstrap support for H3GA60 as seed ortholog is 100%.

Group of orthologs #318. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:456 P.ramorum:456

A8IWJ8              	100.00%		H3G957              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for H3G957 as seed ortholog is 100%.

Group of orthologs #319. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:456 P.ramorum:387

A8J5Y9              	100.00%		H3GAM6              	100.00%
Bootstrap support for A8J5Y9 as seed ortholog is 100%.
Bootstrap support for H3GAM6 as seed ortholog is 100%.

Group of orthologs #320. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:456 P.ramorum:270

A8JHA8              	100.00%		H3GSH8              	100.00%
Bootstrap support for A8JHA8 as seed ortholog is 100%.
Bootstrap support for H3GSH8 as seed ortholog is 100%.

Group of orthologs #321. Best score 455 bits
Score difference with first non-orthologous sequence - C.reinhardtii:455 P.ramorum:455

A8J0N7              	100.00%		H3G8U5              	100.00%
                    	       		H3G9G9              	47.45%
                    	       		H3G9H0              	47.29%
Bootstrap support for A8J0N7 as seed ortholog is 100%.
Bootstrap support for H3G8U5 as seed ortholog is 100%.

Group of orthologs #322. Best score 454 bits
Score difference with first non-orthologous sequence - C.reinhardtii:454 P.ramorum:376

A8HVL4              	100.00%		H3GR02              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 100%.
Bootstrap support for H3GR02 as seed ortholog is 100%.

Group of orthologs #323. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:453 P.ramorum:453

A8HPA0              	100.00%		H3G9L0              	100.00%
Bootstrap support for A8HPA0 as seed ortholog is 100%.
Bootstrap support for H3G9L0 as seed ortholog is 100%.

Group of orthologs #324. Best score 451 bits
Score difference with first non-orthologous sequence - C.reinhardtii:451 P.ramorum:135

A8IWM1              	100.00%		H3GKG8              	100.00%
                    	       		H3GKG6              	78.42%
Bootstrap support for A8IWM1 as seed ortholog is 100%.
Bootstrap support for H3GKG8 as seed ortholog is 98%.

Group of orthologs #325. Best score 450 bits
Score difference with first non-orthologous sequence - C.reinhardtii:450 P.ramorum:264

A8ILF4              	100.00%		H3GFB0              	100.00%
Bootstrap support for A8ILF4 as seed ortholog is 100%.
Bootstrap support for H3GFB0 as seed ortholog is 99%.

Group of orthologs #326. Best score 450 bits
Score difference with first non-orthologous sequence - C.reinhardtii:450 P.ramorum:450

A8JHM2              	100.00%		H3GBM0              	100.00%
Bootstrap support for A8JHM2 as seed ortholog is 100%.
Bootstrap support for H3GBM0 as seed ortholog is 100%.

Group of orthologs #327. Best score 449 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.ramorum:449

A8I3R2              	100.00%		H3GTQ7              	100.00%
Bootstrap support for A8I3R2 as seed ortholog is 99%.
Bootstrap support for H3GTQ7 as seed ortholog is 100%.

Group of orthologs #328. Best score 449 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 P.ramorum:251

Q6IV67              	100.00%		H3G7T0              	100.00%
Bootstrap support for Q6IV67 as seed ortholog is 100%.
Bootstrap support for H3G7T0 as seed ortholog is 100%.

Group of orthologs #329. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.ramorum:447

A8ILR9              	100.00%		H3G5F5              	100.00%
                    	       		H3G8X8              	100.00%
                    	       		H3G7K6              	77.31%
Bootstrap support for A8ILR9 as seed ortholog is 92%.
Bootstrap support for H3G5F5 as seed ortholog is 100%.
Bootstrap support for H3G8X8 as seed ortholog is 100%.

Group of orthologs #330. Best score 446 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.ramorum:114

A8J8P5              	100.00%		H3G6M6              	100.00%
Bootstrap support for A8J8P5 as seed ortholog is 100%.
Bootstrap support for H3G6M6 as seed ortholog is 99%.

Group of orthologs #331. Best score 446 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.ramorum:118

A8JGT1              	100.00%		H3GAA2              	100.00%
Bootstrap support for A8JGT1 as seed ortholog is 99%.
Bootstrap support for H3GAA2 as seed ortholog is 90%.

Group of orthologs #332. Best score 445 bits
Score difference with first non-orthologous sequence - C.reinhardtii:445 P.ramorum:445

A8JH50              	100.00%		H3GQQ7              	100.00%
Bootstrap support for A8JH50 as seed ortholog is 100%.
Bootstrap support for H3GQQ7 as seed ortholog is 100%.

Group of orthologs #333. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 P.ramorum:341

A8JGX1              	100.00%		H3G6K0              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for H3G6K0 as seed ortholog is 100%.

Group of orthologs #334. Best score 442 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.ramorum:153

A8IEF3              	100.00%		H3G9M8              	100.00%
Bootstrap support for A8IEF3 as seed ortholog is 100%.
Bootstrap support for H3G9M8 as seed ortholog is 99%.

Group of orthologs #335. Best score 442 bits
Score difference with first non-orthologous sequence - C.reinhardtii:368 P.ramorum:442

A8IBJ5              	100.00%		H3GJS1              	100.00%
Bootstrap support for A8IBJ5 as seed ortholog is 100%.
Bootstrap support for H3GJS1 as seed ortholog is 100%.

Group of orthologs #336. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:100

A8IKR1              	100.00%		H3G9R7              	100.00%
Bootstrap support for A8IKR1 as seed ortholog is 100%.
Bootstrap support for H3G9R7 as seed ortholog is 98%.

Group of orthologs #337. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 P.ramorum:441

A8JBB2              	100.00%		H3G5V8              	100.00%
Bootstrap support for A8JBB2 as seed ortholog is 100%.
Bootstrap support for H3G5V8 as seed ortholog is 100%.

Group of orthologs #338. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.ramorum:345

A8HZA9              	100.00%		H3HBV5              	100.00%
Bootstrap support for A8HZA9 as seed ortholog is 100%.
Bootstrap support for H3HBV5 as seed ortholog is 100%.

Group of orthologs #339. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.ramorum:440

A8J8W0              	100.00%		H3GE72              	100.00%
                    	       		H3G5Y2              	44.04%
                    	       		H3G5Y1              	7.73%
                    	       		H3GXA7              	7.60%
Bootstrap support for A8J8W0 as seed ortholog is 100%.
Bootstrap support for H3GE72 as seed ortholog is 100%.

Group of orthologs #340. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:440 P.ramorum:440

A8IGM2              	100.00%		H3G8A9              	100.00%
Bootstrap support for A8IGM2 as seed ortholog is 100%.
Bootstrap support for H3G8A9 as seed ortholog is 100%.

Group of orthologs #341. Best score 439 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 P.ramorum:439

A8JF74              	100.00%		H3G6Z8              	100.00%
Bootstrap support for A8JF74 as seed ortholog is 100%.
Bootstrap support for H3G6Z8 as seed ortholog is 100%.

Group of orthologs #342. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:438 P.ramorum:327

A8IRV0              	100.00%		H3GZB3              	100.00%
Bootstrap support for A8IRV0 as seed ortholog is 100%.
Bootstrap support for H3GZB3 as seed ortholog is 100%.

Group of orthologs #343. Best score 435 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.ramorum:272

A8IAJ1              	100.00%		H3GA44              	100.00%
Bootstrap support for A8IAJ1 as seed ortholog is 100%.
Bootstrap support for H3GA44 as seed ortholog is 100%.

Group of orthologs #344. Best score 434 bits
Score difference with first non-orthologous sequence - C.reinhardtii:434 P.ramorum:434

A8JCR1              	100.00%		H3G7L0              	100.00%
Bootstrap support for A8JCR1 as seed ortholog is 100%.
Bootstrap support for H3G7L0 as seed ortholog is 100%.

Group of orthologs #345. Best score 433 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:433

A8I305              	100.00%		H3GAH2              	100.00%
                    	       		H3GAH1              	92.31%
Bootstrap support for A8I305 as seed ortholog is 97%.
Bootstrap support for H3GAH2 as seed ortholog is 100%.

Group of orthologs #346. Best score 433 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:144

A8I9T2              	100.00%		H3GEF1              	100.00%
Bootstrap support for A8I9T2 as seed ortholog is 95%.
Bootstrap support for H3GEF1 as seed ortholog is 99%.

Group of orthologs #347. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:430 P.ramorum:430

A8JHC1              	100.00%		H3GQR2              	100.00%
Bootstrap support for A8JHC1 as seed ortholog is 100%.
Bootstrap support for H3GQR2 as seed ortholog is 100%.

Group of orthologs #348. Best score 429 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.ramorum:28

A8J4M4              	100.00%		H3H5V6              	100.00%
A8J4M6              	68.89%		H3HAC5              	57.55%
                    	       		H3GY41              	42.50%
                    	       		H3G6X0              	39.04%
Bootstrap support for A8J4M4 as seed ortholog is 99%.
Bootstrap support for H3H5V6 as seed ortholog is 66%.
Alternative seed ortholog is H3GAX1 (28 bits away from this cluster)

Group of orthologs #349. Best score 429 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:269

A8JHR9              	100.00%		H3G964              	100.00%
                    	       		H3G695              	95.06%
                    	       		H3G963              	93.92%
Bootstrap support for A8JHR9 as seed ortholog is 99%.
Bootstrap support for H3G964 as seed ortholog is 100%.

Group of orthologs #350. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:428 P.ramorum:257

A8ITF6              	100.00%		H3G8F6              	100.00%
                    	       		H3GED8              	61.23%
Bootstrap support for A8ITF6 as seed ortholog is 100%.
Bootstrap support for H3G8F6 as seed ortholog is 100%.

Group of orthologs #351. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 P.ramorum:235

A8JF90              	100.00%		H3GCA4              	100.00%
A8JF89              	39.06%		
A8J6D9              	22.89%		
A8JF52              	18.53%		
A8IQ59              	11.92%		
A8JIU8              	5.46%		
A8IVU6              	5.15%		
Bootstrap support for A8JF90 as seed ortholog is 100%.
Bootstrap support for H3GCA4 as seed ortholog is 99%.

Group of orthologs #352. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:69

A8JH58              	100.00%		H3GRK5              	100.00%
                    	       		H3G6L5              	46.91%
                    	       		H3G8A1              	37.92%
                    	       		H3GRK8              	26.00%
                    	       		H3GRN4              	25.89%
                    	       		H3GRL0              	14.73%
Bootstrap support for A8JH58 as seed ortholog is 83%.
Bootstrap support for H3GRK5 as seed ortholog is 94%.

Group of orthologs #353. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 P.ramorum:426

A8J3F6              	100.00%		H3G9P3              	100.00%
Bootstrap support for A8J3F6 as seed ortholog is 100%.
Bootstrap support for H3G9P3 as seed ortholog is 100%.

Group of orthologs #354. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:426 P.ramorum:426

A8JIP9              	100.00%		H3GLS3              	100.00%
Bootstrap support for A8JIP9 as seed ortholog is 100%.
Bootstrap support for H3GLS3 as seed ortholog is 100%.

Group of orthologs #355. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:425 P.ramorum:425

A8HPD2              	100.00%		H3G9E8              	100.00%
Bootstrap support for A8HPD2 as seed ortholog is 100%.
Bootstrap support for H3G9E8 as seed ortholog is 100%.

Group of orthologs #356. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 P.ramorum:425

A8IWT5              	100.00%		H3GA67              	100.00%
Bootstrap support for A8IWT5 as seed ortholog is 100%.
Bootstrap support for H3GA67 as seed ortholog is 100%.

Group of orthologs #357. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.ramorum:121

A8IXK0              	100.00%		H3HE00              	100.00%
Bootstrap support for A8IXK0 as seed ortholog is 99%.
Bootstrap support for H3HE00 as seed ortholog is 98%.

Group of orthologs #358. Best score 423 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:58

Q9FXT7              	100.00%		H3GG23              	100.00%
A8IKD6              	12.02%		
A8IKE3              	7.92%		
Bootstrap support for Q9FXT7 as seed ortholog is 99%.
Bootstrap support for H3GG23 as seed ortholog is 96%.

Group of orthologs #359. Best score 423 bits
Score difference with first non-orthologous sequence - C.reinhardtii:423 P.ramorum:423

A8J1Z0              	100.00%		H3G8L0              	100.00%
                    	       		H3G8K8              	76.29%
Bootstrap support for A8J1Z0 as seed ortholog is 100%.
Bootstrap support for H3G8L0 as seed ortholog is 100%.

Group of orthologs #360. Best score 422 bits
Score difference with first non-orthologous sequence - C.reinhardtii:422 P.ramorum:171

A8HQI5              	100.00%		H3GHW8              	100.00%
Bootstrap support for A8HQI5 as seed ortholog is 100%.
Bootstrap support for H3GHW8 as seed ortholog is 100%.

Group of orthologs #361. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:17

A8IQM3              	100.00%		H3G633              	100.00%
                    	       		H3G675              	50.42%
Bootstrap support for A8IQM3 as seed ortholog is 99%.
Bootstrap support for H3G633 as seed ortholog is 65%.
Alternative seed ortholog is H3G6V8 (17 bits away from this cluster)

Group of orthologs #362. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:421 P.ramorum:288

A8II74              	100.00%		H3H038              	100.00%
Bootstrap support for A8II74 as seed ortholog is 100%.
Bootstrap support for H3H038 as seed ortholog is 100%.

Group of orthologs #363. Best score 420 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:231

A8J3M6              	100.00%		H3GAT7              	100.00%
Bootstrap support for A8J3M6 as seed ortholog is 99%.
Bootstrap support for H3GAT7 as seed ortholog is 100%.

Group of orthologs #364. Best score 420 bits
Score difference with first non-orthologous sequence - C.reinhardtii:420 P.ramorum:183

A8J6J6              	100.00%		H3G9X7              	100.00%
Bootstrap support for A8J6J6 as seed ortholog is 100%.
Bootstrap support for H3G9X7 as seed ortholog is 99%.

Group of orthologs #365. Best score 419 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:155

A8ISF0              	100.00%		H3G9P8              	100.00%
Bootstrap support for A8ISF0 as seed ortholog is 99%.
Bootstrap support for H3G9P8 as seed ortholog is 99%.

Group of orthologs #366. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:418 P.ramorum:418

A8HXS9              	100.00%		H3GH98              	100.00%
Bootstrap support for A8HXS9 as seed ortholog is 100%.
Bootstrap support for H3GH98 as seed ortholog is 100%.

Group of orthologs #367. Best score 417 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:355

A8I495              	100.00%		H3G8X2              	100.00%
Bootstrap support for A8I495 as seed ortholog is 92%.
Bootstrap support for H3G8X2 as seed ortholog is 100%.

Group of orthologs #368. Best score 416 bits
Score difference with first non-orthologous sequence - C.reinhardtii:416 P.ramorum:204

A8IRT6              	100.00%		H3G8W8              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for H3G8W8 as seed ortholog is 100%.

Group of orthologs #369. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.ramorum:213

A8IIK8              	100.00%		H3GDL5              	100.00%
Bootstrap support for A8IIK8 as seed ortholog is 99%.
Bootstrap support for H3GDL5 as seed ortholog is 100%.

Group of orthologs #370. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.ramorum:414

A8JCG5              	100.00%		H3G8B8              	100.00%
Bootstrap support for A8JCG5 as seed ortholog is 100%.
Bootstrap support for H3G8B8 as seed ortholog is 100%.

Group of orthologs #371. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.ramorum:414

Q946G4              	100.00%		H3GGX9              	100.00%
Bootstrap support for Q946G4 as seed ortholog is 100%.
Bootstrap support for H3GGX9 as seed ortholog is 100%.

Group of orthologs #372. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.ramorum:181

A8JAG8              	100.00%		H3HCL6              	100.00%
Bootstrap support for A8JAG8 as seed ortholog is 99%.
Bootstrap support for H3HCL6 as seed ortholog is 99%.

Group of orthologs #373. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.ramorum:413

A8J129              	100.00%		H3G9S1              	100.00%
A8I263              	5.64%		
Bootstrap support for A8J129 as seed ortholog is 70%.
Alternative seed ortholog is A8HXW8 (37 bits away from this cluster)
Bootstrap support for H3G9S1 as seed ortholog is 100%.

Group of orthologs #374. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 P.ramorum:411

A8IAS5              	100.00%		H3GCH7              	100.00%
                    	       		H3G888              	65.75%
                    	       		H3GCH8              	24.18%
Bootstrap support for A8IAS5 as seed ortholog is 100%.
Bootstrap support for H3GCH7 as seed ortholog is 100%.

Group of orthologs #375. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 P.ramorum:188

A8ISA9              	100.00%		H3G8J7              	100.00%
A8IEE5              	18.77%		H3G8J8              	60.18%
Bootstrap support for A8ISA9 as seed ortholog is 100%.
Bootstrap support for H3G8J7 as seed ortholog is 100%.

Group of orthologs #376. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 P.ramorum:411

A8I459              	100.00%		H3GWJ6              	100.00%
                    	       		H3GWJ5              	57.29%
Bootstrap support for A8I459 as seed ortholog is 100%.
Bootstrap support for H3GWJ6 as seed ortholog is 100%.

Group of orthologs #377. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 P.ramorum:411

A8HNF4              	100.00%		H3G7Z2              	100.00%
Bootstrap support for A8HNF4 as seed ortholog is 100%.
Bootstrap support for H3G7Z2 as seed ortholog is 100%.

Group of orthologs #378. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.ramorum:232

A8J240              	100.00%		H3G5E4              	100.00%
                    	       		H3G6J2              	100.00%
Bootstrap support for A8J240 as seed ortholog is 99%.
Bootstrap support for H3G5E4 as seed ortholog is 100%.
Bootstrap support for H3G6J2 as seed ortholog is 99%.

Group of orthologs #379. Best score 409 bits
Score difference with first non-orthologous sequence - C.reinhardtii:409 P.ramorum:409

A8I988              	100.00%		H3G8D2              	100.00%
Bootstrap support for A8I988 as seed ortholog is 100%.
Bootstrap support for H3G8D2 as seed ortholog is 100%.

Group of orthologs #380. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:157

A8IZ49              	100.00%		H3GA49              	100.00%
                    	       		H3G616              	19.69%
Bootstrap support for A8IZ49 as seed ortholog is 99%.
Bootstrap support for H3GA49 as seed ortholog is 99%.

Group of orthologs #381. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 P.ramorum:408

A8I4E9              	100.00%		H3GEG8              	100.00%
Bootstrap support for A8I4E9 as seed ortholog is 100%.
Bootstrap support for H3GEG8 as seed ortholog is 100%.

Group of orthologs #382. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 P.ramorum:408

A8J5D8              	100.00%		H3GHD3              	100.00%
Bootstrap support for A8J5D8 as seed ortholog is 100%.
Bootstrap support for H3GHD3 as seed ortholog is 100%.

Group of orthologs #383. Best score 407 bits
Score difference with first non-orthologous sequence - C.reinhardtii:407 P.ramorum:407

A8J2W0              	100.00%		H3G8K5              	100.00%
Bootstrap support for A8J2W0 as seed ortholog is 100%.
Bootstrap support for H3G8K5 as seed ortholog is 100%.

Group of orthologs #384. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.ramorum:265

A8HU20              	100.00%		H3HDT2              	100.00%
Bootstrap support for A8HU20 as seed ortholog is 100%.
Bootstrap support for H3HDT2 as seed ortholog is 100%.

Group of orthologs #385. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.ramorum:34

A8JB97              	100.00%		H3GA52              	100.00%
                    	       		H3GA53              	64.19%
                    	       		H3GWZ3              	57.43%
                    	       		H3GWZ5              	54.10%
                    	       		H3GAW6              	41.57%
                    	       		H3GAL7              	33.04%
                    	       		H3G5D4              	16.08%
Bootstrap support for A8JB97 as seed ortholog is 99%.
Bootstrap support for H3GA52 as seed ortholog is 71%.
Alternative seed ortholog is H3GPX7 (34 bits away from this cluster)

Group of orthologs #386. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:195

A8HQF5              	100.00%		H3H7S1              	100.00%
                    	       		H3H546              	31.51%
Bootstrap support for A8HQF5 as seed ortholog is 99%.
Bootstrap support for H3H7S1 as seed ortholog is 100%.

Group of orthologs #387. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:404 P.ramorum:404

A8IYU6              	100.00%		H3G6P3              	100.00%
A8IYU5              	9.84%		
Bootstrap support for A8IYU6 as seed ortholog is 100%.
Bootstrap support for H3G6P3 as seed ortholog is 100%.

Group of orthologs #388. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.ramorum:404

A8IES3              	100.00%		H3GG62              	100.00%
A8IES0              	22.54%		
Bootstrap support for A8IES3 as seed ortholog is 100%.
Bootstrap support for H3GG62 as seed ortholog is 100%.

Group of orthologs #389. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 P.ramorum:359

A8J1F4              	100.00%		H3GL68              	100.00%
Bootstrap support for A8J1F4 as seed ortholog is 100%.
Bootstrap support for H3GL68 as seed ortholog is 100%.

Group of orthologs #390. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.ramorum:137

A8I2E4              	100.00%		H3GKW7              	100.00%
                    	       		H3GKW5              	98.90%
                    	       		H3GHI6              	48.66%
                    	       		H3GHI3              	48.04%
                    	       		H3GHI4              	47.19%
                    	       		H3GHI5              	45.84%
                    	       		H3GKW6              	44.74%
                    	       		H3HBZ8              	35.09%
                    	       		H3GVY1              	23.11%
                    	       		H3GVY4              	22.49%
Bootstrap support for A8I2E4 as seed ortholog is 99%.
Bootstrap support for H3GKW7 as seed ortholog is 99%.

Group of orthologs #391. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.ramorum:51

A8I9J2              	100.00%		H3HBW2              	100.00%
                    	       		H3GK38              	93.07%
                    	       		H3GK36              	19.41%
                    	       		H3HBW6              	12.25%
Bootstrap support for A8I9J2 as seed ortholog is 100%.
Bootstrap support for H3HBW2 as seed ortholog is 75%.

Group of orthologs #392. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:403 P.ramorum:403

A8IAK4              	100.00%		H3G565              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 100%.
Bootstrap support for H3G565 as seed ortholog is 100%.

Group of orthologs #393. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:104

A8JB47              	100.00%		H3G7H2              	100.00%
Bootstrap support for A8JB47 as seed ortholog is 100%.
Bootstrap support for H3G7H2 as seed ortholog is 99%.

Group of orthologs #394. Best score 402 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.ramorum:402

A8HME7              	100.00%		H3G950              	100.00%
Bootstrap support for A8HME7 as seed ortholog is 99%.
Bootstrap support for H3G950 as seed ortholog is 100%.

Group of orthologs #395. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 P.ramorum:400

A8HTR3              	100.00%		H3H2G5              	100.00%
Bootstrap support for A8HTR3 as seed ortholog is 100%.
Bootstrap support for H3H2G5 as seed ortholog is 100%.

Group of orthologs #396. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.ramorum:64

A8IJE8              	100.00%		H3G6G9              	100.00%
Bootstrap support for A8IJE8 as seed ortholog is 100%.
Bootstrap support for H3G6G9 as seed ortholog is 92%.

Group of orthologs #397. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 P.ramorum:398

A8IYD3              	100.00%		H3G7L5              	100.00%
Bootstrap support for A8IYD3 as seed ortholog is 100%.
Bootstrap support for H3G7L5 as seed ortholog is 100%.

Group of orthologs #398. Best score 397 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:168

A8HMC0              	100.00%		H3GAL8              	100.00%
                    	       		H3G6U6              	53.73%
Bootstrap support for A8HMC0 as seed ortholog is 100%.
Bootstrap support for H3GAL8 as seed ortholog is 99%.

Group of orthologs #399. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 P.ramorum:396

A8IK52              	100.00%		H3G9L7              	100.00%
Bootstrap support for A8IK52 as seed ortholog is 100%.
Bootstrap support for H3G9L7 as seed ortholog is 100%.

Group of orthologs #400. Best score 395 bits
Score difference with first non-orthologous sequence - C.reinhardtii:395 P.ramorum:395

A8JB14              	100.00%		H3G972              	100.00%
Bootstrap support for A8JB14 as seed ortholog is 100%.
Bootstrap support for H3G972 as seed ortholog is 100%.

Group of orthologs #401. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 P.ramorum:394

A8IS72              	100.00%		H3G7F3              	100.00%
Bootstrap support for A8IS72 as seed ortholog is 100%.
Bootstrap support for H3G7F3 as seed ortholog is 100%.

Group of orthologs #402. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:394 P.ramorum:394

A8J506              	100.00%		H3GAC0              	100.00%
Bootstrap support for A8J506 as seed ortholog is 100%.
Bootstrap support for H3GAC0 as seed ortholog is 100%.

Group of orthologs #403. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:394 P.ramorum:394

A8JCS4              	100.00%		H3G882              	100.00%
Bootstrap support for A8JCS4 as seed ortholog is 100%.
Bootstrap support for H3G882 as seed ortholog is 100%.

Group of orthologs #404. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:280

Q6Q242              	100.00%		H3GER8              	100.00%
Bootstrap support for Q6Q242 as seed ortholog is 99%.
Bootstrap support for H3GER8 as seed ortholog is 100%.

Group of orthologs #405. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.ramorum:211

A8I9R1              	100.00%		H3G7Z0              	100.00%
                    	       		H3GVF8              	5.55%
Bootstrap support for A8I9R1 as seed ortholog is 100%.
Bootstrap support for H3G7Z0 as seed ortholog is 100%.

Group of orthologs #406. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:393 P.ramorum:393

A8JFC4              	100.00%		H3GAU7              	100.00%
Bootstrap support for A8JFC4 as seed ortholog is 100%.
Bootstrap support for H3GAU7 as seed ortholog is 100%.

Group of orthologs #407. Best score 392 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.ramorum:392

A8I2K8              	100.00%		H3H326              	100.00%
                    	       		H3G7R2              	69.90%
Bootstrap support for A8I2K8 as seed ortholog is 100%.
Bootstrap support for H3H326 as seed ortholog is 100%.

Group of orthologs #408. Best score 392 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.ramorum:220

A8J8V7              	100.00%		H3G4X2              	100.00%
Bootstrap support for A8J8V7 as seed ortholog is 100%.
Bootstrap support for H3G4X2 as seed ortholog is 100%.

Group of orthologs #409. Best score 392 bits
Score difference with first non-orthologous sequence - C.reinhardtii:392 P.ramorum:120

A8J027              	100.00%		H3GCU1              	100.00%
Bootstrap support for A8J027 as seed ortholog is 100%.
Bootstrap support for H3GCU1 as seed ortholog is 99%.

Group of orthologs #410. Best score 391 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 P.ramorum:391

A8ILT1              	100.00%		H3GHW1              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 100%.
Bootstrap support for H3GHW1 as seed ortholog is 100%.

Group of orthologs #411. Best score 390 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 P.ramorum:182

A8J9W4              	100.00%		H3G9B3              	100.00%
Bootstrap support for A8J9W4 as seed ortholog is 100%.
Bootstrap support for H3G9B3 as seed ortholog is 100%.

Group of orthologs #412. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 P.ramorum:388

A8J537              	100.00%		H3G9J5              	100.00%
                    	       		H3G9E1              	67.22%
                    	       		H3G6P1              	50.30%
Bootstrap support for A8J537 as seed ortholog is 100%.
Bootstrap support for H3G9J5 as seed ortholog is 100%.

Group of orthologs #413. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 P.ramorum:388

A8HQJ4              	100.00%		H3GCB7              	100.00%
Bootstrap support for A8HQJ4 as seed ortholog is 100%.
Bootstrap support for H3GCB7 as seed ortholog is 100%.

Group of orthologs #414. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 P.ramorum:388

A8JBE4              	100.00%		H3HCS0              	100.00%
Bootstrap support for A8JBE4 as seed ortholog is 100%.
Bootstrap support for H3HCS0 as seed ortholog is 100%.

Group of orthologs #415. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 P.ramorum:387

A8HRF8              	100.00%		H3GEW8              	100.00%
Bootstrap support for A8HRF8 as seed ortholog is 100%.
Bootstrap support for H3GEW8 as seed ortholog is 100%.

Group of orthologs #416. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 P.ramorum:386

A8INT0              	100.00%		H3GEI9              	100.00%
                    	       		H3GUG7              	5.25%
Bootstrap support for A8INT0 as seed ortholog is 100%.
Bootstrap support for H3GEI9 as seed ortholog is 100%.

Group of orthologs #417. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 P.ramorum:169

A8J0X4              	100.00%		H3G8E1              	100.00%
Bootstrap support for A8J0X4 as seed ortholog is 100%.
Bootstrap support for H3G8E1 as seed ortholog is 99%.

Group of orthologs #418. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 P.ramorum:386

A8IFG0              	100.00%		H3GPE9              	100.00%
Bootstrap support for A8IFG0 as seed ortholog is 100%.
Bootstrap support for H3GPE9 as seed ortholog is 100%.

Group of orthologs #419. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.ramorum:265

A8ITM4              	100.00%		H3GVB8              	100.00%
                    	       		H3G9X8              	63.66%
Bootstrap support for A8ITM4 as seed ortholog is 100%.
Bootstrap support for H3GVB8 as seed ortholog is 100%.

Group of orthologs #420. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 P.ramorum:181

A8JDY3              	100.00%		H3GSM2              	100.00%
Bootstrap support for A8JDY3 as seed ortholog is 100%.
Bootstrap support for H3GSM2 as seed ortholog is 99%.

Group of orthologs #421. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 P.ramorum:384

A8HU09              	100.00%		H3G8E0              	100.00%
Bootstrap support for A8HU09 as seed ortholog is 100%.
Bootstrap support for H3G8E0 as seed ortholog is 100%.

Group of orthologs #422. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 P.ramorum:384

A8JFT1              	100.00%		H3G5J3              	100.00%
Bootstrap support for A8JFT1 as seed ortholog is 100%.
Bootstrap support for H3G5J3 as seed ortholog is 100%.

Group of orthologs #423. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 P.ramorum:382

A8HUE0              	100.00%		H3G8Q6              	100.00%
Bootstrap support for A8HUE0 as seed ortholog is 100%.
Bootstrap support for H3G8Q6 as seed ortholog is 100%.

Group of orthologs #424. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 P.ramorum:382

A8J1V4              	100.00%		H3GUA9              	100.00%
Bootstrap support for A8J1V4 as seed ortholog is 100%.
Bootstrap support for H3GUA9 as seed ortholog is 100%.

Group of orthologs #425. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 P.ramorum:381

A8HWI3              	100.00%		H3GA39              	100.00%
Bootstrap support for A8HWI3 as seed ortholog is 100%.
Bootstrap support for H3GA39 as seed ortholog is 100%.

Group of orthologs #426. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 P.ramorum:381

A8J7U7              	100.00%		H3G894              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for H3G894 as seed ortholog is 100%.

Group of orthologs #427. Best score 380 bits
Score difference with first non-orthologous sequence - C.reinhardtii:380 P.ramorum:231

A8JB22              	100.00%		H3HBS2              	100.00%
Bootstrap support for A8JB22 as seed ortholog is 100%.
Bootstrap support for H3HBS2 as seed ortholog is 100%.

Group of orthologs #428. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 P.ramorum:174

A8I520              	100.00%		H3G853              	100.00%
A8J1W3              	6.35%		
Bootstrap support for A8I520 as seed ortholog is 99%.
Bootstrap support for H3G853 as seed ortholog is 99%.

Group of orthologs #429. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:378 P.ramorum:312

A8I274              	100.00%		H3G7P3              	100.00%
Bootstrap support for A8I274 as seed ortholog is 100%.
Bootstrap support for H3G7P3 as seed ortholog is 100%.

Group of orthologs #430. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:378 P.ramorum:378

A8J4I7              	100.00%		H3G8K7              	100.00%
Bootstrap support for A8J4I7 as seed ortholog is 100%.
Bootstrap support for H3G8K7 as seed ortholog is 100%.

Group of orthologs #431. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:378 P.ramorum:378

A8IKA1              	100.00%		H3GMC4              	100.00%
Bootstrap support for A8IKA1 as seed ortholog is 100%.
Bootstrap support for H3GMC4 as seed ortholog is 100%.

Group of orthologs #432. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 P.ramorum:378

A8JBN5              	100.00%		H3GAQ0              	100.00%
Bootstrap support for A8JBN5 as seed ortholog is 100%.
Bootstrap support for H3GAQ0 as seed ortholog is 100%.

Group of orthologs #433. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:376

A8IG50              	100.00%		H3G851              	100.00%
                    	       		H3GBH1              	47.21%
Bootstrap support for A8IG50 as seed ortholog is 97%.
Bootstrap support for H3G851 as seed ortholog is 100%.

Group of orthologs #434. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:291 P.ramorum:324

A8J760              	100.00%		H3G7W7              	100.00%
Bootstrap support for A8J760 as seed ortholog is 100%.
Bootstrap support for H3G7W7 as seed ortholog is 100%.

Group of orthologs #435. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:375 P.ramorum:375

A8I161              	100.00%		H3GTV1              	100.00%
Bootstrap support for A8I161 as seed ortholog is 100%.
Bootstrap support for H3GTV1 as seed ortholog is 100%.

Group of orthologs #436. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.ramorum:149

A8IQC5              	100.00%		H3GA03              	100.00%
Bootstrap support for A8IQC5 as seed ortholog is 99%.
Bootstrap support for H3GA03 as seed ortholog is 99%.

Group of orthologs #437. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.ramorum:242

A8J1A0              	100.00%		H3GIT1              	100.00%
Bootstrap support for A8J1A0 as seed ortholog is 100%.
Bootstrap support for H3GIT1 as seed ortholog is 100%.

Group of orthologs #438. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:372

A8I5I0              	100.00%		H3H170              	100.00%
Bootstrap support for A8I5I0 as seed ortholog is 96%.
Bootstrap support for H3H170 as seed ortholog is 100%.

Group of orthologs #439. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:372 P.ramorum:372

A8J7D8              	100.00%		H3GLA6              	100.00%
Bootstrap support for A8J7D8 as seed ortholog is 100%.
Bootstrap support for H3GLA6 as seed ortholog is 100%.

Group of orthologs #440. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:372 P.ramorum:112

A8IDH5              	100.00%		H3HAP2              	100.00%
Bootstrap support for A8IDH5 as seed ortholog is 100%.
Bootstrap support for H3HAP2 as seed ortholog is 99%.

Group of orthologs #441. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.ramorum:184

A8J4W1              	100.00%		H3GBZ2              	100.00%
                    	       		H3G4Y2              	91.54%
Bootstrap support for A8J4W1 as seed ortholog is 99%.
Bootstrap support for H3GBZ2 as seed ortholog is 99%.

Group of orthologs #442. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 P.ramorum:371

A8JCY9              	100.00%		H3GPE0              	100.00%
Bootstrap support for A8JCY9 as seed ortholog is 100%.
Bootstrap support for H3GPE0 as seed ortholog is 100%.

Group of orthologs #443. Best score 369 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.ramorum:53

A8I1P3              	100.00%		H3G8Q7              	100.00%
Bootstrap support for A8I1P3 as seed ortholog is 93%.
Bootstrap support for H3G8Q7 as seed ortholog is 95%.

Group of orthologs #444. Best score 369 bits
Score difference with first non-orthologous sequence - C.reinhardtii:369 P.ramorum:369

A8IL16              	100.00%		H3GVC2              	100.00%
Bootstrap support for A8IL16 as seed ortholog is 100%.
Bootstrap support for H3GVC2 as seed ortholog is 100%.

Group of orthologs #445. Best score 368 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:368

A8J386              	100.00%		H3HBV1              	100.00%
Bootstrap support for A8J386 as seed ortholog is 99%.
Bootstrap support for H3HBV1 as seed ortholog is 100%.

Group of orthologs #446. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 P.ramorum:367

A8IC90              	100.00%		H3G8Y1              	100.00%
Bootstrap support for A8IC90 as seed ortholog is 100%.
Bootstrap support for H3G8Y1 as seed ortholog is 100%.

Group of orthologs #447. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.ramorum:367

A8IVK1              	100.00%		H3G973              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 100%.
Bootstrap support for H3G973 as seed ortholog is 100%.

Group of orthologs #448. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 P.ramorum:367

A8J426              	100.00%		H3GS73              	100.00%
Bootstrap support for A8J426 as seed ortholog is 100%.
Bootstrap support for H3GS73 as seed ortholog is 100%.

Group of orthologs #449. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 P.ramorum:366

A8HME4              	100.00%		H3G949              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for H3G949 as seed ortholog is 100%.

Group of orthologs #450. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.ramorum:219

A8ITS8              	100.00%		H3G6Y6              	100.00%
Bootstrap support for A8ITS8 as seed ortholog is 100%.
Bootstrap support for H3G6Y6 as seed ortholog is 100%.

Group of orthologs #451. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 P.ramorum:366

A8J6Z3              	100.00%		H3G9P2              	100.00%
Bootstrap support for A8J6Z3 as seed ortholog is 100%.
Bootstrap support for H3G9P2 as seed ortholog is 100%.

Group of orthologs #452. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 P.ramorum:131

A8JA80              	100.00%		H3G8V8              	100.00%
Bootstrap support for A8JA80 as seed ortholog is 100%.
Bootstrap support for H3G8V8 as seed ortholog is 99%.

Group of orthologs #453. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 P.ramorum:366

A8JBQ5              	100.00%		H3GIF4              	100.00%
Bootstrap support for A8JBQ5 as seed ortholog is 100%.
Bootstrap support for H3GIF4 as seed ortholog is 100%.

Group of orthologs #454. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 P.ramorum:136

A8HSJ3              	100.00%		H3G804              	100.00%
Bootstrap support for A8HSJ3 as seed ortholog is 67%.
Alternative seed ortholog is A8I2U7 (17 bits away from this cluster)
Bootstrap support for H3G804 as seed ortholog is 99%.

Group of orthologs #455. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:364 P.ramorum:364

A8IWK3              	100.00%		H3G9I3              	100.00%
Bootstrap support for A8IWK3 as seed ortholog is 100%.
Bootstrap support for H3G9I3 as seed ortholog is 100%.

Group of orthologs #456. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.ramorum:364

A8J6M3              	100.00%		H3G7Y5              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 100%.
Bootstrap support for H3G7Y5 as seed ortholog is 100%.

Group of orthologs #457. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.ramorum:307

A8HQY5              	100.00%		H3GJC5              	100.00%
Bootstrap support for A8HQY5 as seed ortholog is 100%.
Bootstrap support for H3GJC5 as seed ortholog is 100%.

Group of orthologs #458. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 P.ramorum:363

A8I901              	100.00%		H3GQ96              	100.00%
Bootstrap support for A8I901 as seed ortholog is 100%.
Bootstrap support for H3GQ96 as seed ortholog is 100%.

Group of orthologs #459. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 P.ramorum:363

A8IX41              	100.00%		H3HB70              	100.00%
Bootstrap support for A8IX41 as seed ortholog is 100%.
Bootstrap support for H3HB70 as seed ortholog is 100%.

Group of orthologs #460. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.ramorum:97

A8JGU0              	100.00%		H3GWC2              	100.00%
Bootstrap support for A8JGU0 as seed ortholog is 100%.
Bootstrap support for H3GWC2 as seed ortholog is 98%.

Group of orthologs #461. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:181

A8J8R3              	100.00%		H3GJ91              	100.00%
A8J8R1              	37.40%		H3G5M5              	26.43%
Bootstrap support for A8J8R3 as seed ortholog is 99%.
Bootstrap support for H3GJ91 as seed ortholog is 99%.

Group of orthologs #462. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 P.ramorum:228

A8J933              	100.00%		H3H5P9              	100.00%
                    	       		H3H820              	25.64%
Bootstrap support for A8J933 as seed ortholog is 100%.
Bootstrap support for H3H5P9 as seed ortholog is 100%.

Group of orthologs #463. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 P.ramorum:361

A8JHY6              	100.00%		H3G6M0              	100.00%
Bootstrap support for A8JHY6 as seed ortholog is 100%.
Bootstrap support for H3G6M0 as seed ortholog is 100%.

Group of orthologs #464. Best score 360 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.ramorum:300

A8IWL4              	100.00%		H3GAG1              	100.00%
Bootstrap support for A8IWL4 as seed ortholog is 100%.
Bootstrap support for H3GAG1 as seed ortholog is 100%.

Group of orthologs #465. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:47

A8IVC7              	100.00%		H3G5Z4              	100.00%
Bootstrap support for A8IVC7 as seed ortholog is 99%.
Bootstrap support for H3G5Z4 as seed ortholog is 94%.

Group of orthologs #466. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 P.ramorum:359

A8J5E0              	100.00%		H3G8T3              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 100%.
Bootstrap support for H3G8T3 as seed ortholog is 100%.

Group of orthologs #467. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 P.ramorum:359

Q5G8B9              	100.00%		H3GWU2              	100.00%
Bootstrap support for Q5G8B9 as seed ortholog is 100%.
Bootstrap support for H3GWU2 as seed ortholog is 100%.

Group of orthologs #468. Best score 357 bits
Score difference with first non-orthologous sequence - C.reinhardtii:357 P.ramorum:357

A8HVA6              	100.00%		H3G9X4              	100.00%
Bootstrap support for A8HVA6 as seed ortholog is 100%.
Bootstrap support for H3G9X4 as seed ortholog is 100%.

Group of orthologs #469. Best score 357 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:357

A8IET6              	100.00%		H3H2X5              	100.00%
Bootstrap support for A8IET6 as seed ortholog is 99%.
Bootstrap support for H3H2X5 as seed ortholog is 100%.

Group of orthologs #470. Best score 356 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:237

A8JD37              	100.00%		H3G5D1              	100.00%
Bootstrap support for A8JD37 as seed ortholog is 100%.
Bootstrap support for H3G5D1 as seed ortholog is 100%.

Group of orthologs #471. Best score 356 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.ramorum:193

A8HZ73              	100.00%		H3H2U2              	100.00%
Bootstrap support for A8HZ73 as seed ortholog is 100%.
Bootstrap support for H3H2U2 as seed ortholog is 100%.

Group of orthologs #472. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:355 P.ramorum:355

A8HR70              	100.00%		H3GA48              	100.00%
Bootstrap support for A8HR70 as seed ortholog is 100%.
Bootstrap support for H3GA48 as seed ortholog is 100%.

Group of orthologs #473. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 P.ramorum:354

A8J2Z6              	100.00%		H3G8E2              	100.00%
Bootstrap support for A8J2Z6 as seed ortholog is 100%.
Bootstrap support for H3G8E2 as seed ortholog is 100%.

Group of orthologs #474. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 P.ramorum:354

A8IP78              	100.00%		H3GTC8              	100.00%
Bootstrap support for A8IP78 as seed ortholog is 100%.
Bootstrap support for H3GTC8 as seed ortholog is 100%.

Group of orthologs #475. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 P.ramorum:354

A8J5W8              	100.00%		H3GWA8              	100.00%
Bootstrap support for A8J5W8 as seed ortholog is 100%.
Bootstrap support for H3GWA8 as seed ortholog is 100%.

Group of orthologs #476. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:120

A8IVD4              	100.00%		H3G892              	100.00%
A8J7L6              	19.46%		H3G9C1              	39.58%
Bootstrap support for A8IVD4 as seed ortholog is 100%.
Bootstrap support for H3G892 as seed ortholog is 99%.

Group of orthologs #477. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:211

A8IU92              	100.00%		H3G8U4              	100.00%
Bootstrap support for A8IU92 as seed ortholog is 100%.
Bootstrap support for H3G8U4 as seed ortholog is 100%.

Group of orthologs #478. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:263

A8J2Z9              	100.00%		H3GAS1              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 100%.
Bootstrap support for H3GAS1 as seed ortholog is 100%.

Group of orthologs #479. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:353

A8J3U8              	100.00%		H3GAJ2              	100.00%
Bootstrap support for A8J3U8 as seed ortholog is 100%.
Bootstrap support for H3GAJ2 as seed ortholog is 100%.

Group of orthologs #480. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:353

A8JAA6              	100.00%		H3G5C0              	100.00%
Bootstrap support for A8JAA6 as seed ortholog is 100%.
Bootstrap support for H3G5C0 as seed ortholog is 100%.

Group of orthologs #481. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:353

A8J6Q7              	100.00%		H3G9K2              	100.00%
Bootstrap support for A8J6Q7 as seed ortholog is 100%.
Bootstrap support for H3G9K2 as seed ortholog is 100%.

Group of orthologs #482. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.ramorum:353

A8JGW6              	100.00%		H3H0F3              	100.00%
Bootstrap support for A8JGW6 as seed ortholog is 100%.
Bootstrap support for H3H0F3 as seed ortholog is 100%.

Group of orthologs #483. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:179

A8J1V5              	100.00%		H3G9C6              	100.00%
A8HYH4              	12.91%		
Bootstrap support for A8J1V5 as seed ortholog is 100%.
Bootstrap support for H3G9C6 as seed ortholog is 99%.

Group of orthologs #484. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 P.ramorum:352

A8HQF0              	100.00%		H3H0X1              	100.00%
Bootstrap support for A8HQF0 as seed ortholog is 100%.
Bootstrap support for H3H0X1 as seed ortholog is 100%.

Group of orthologs #485. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 P.ramorum:352

A8J5W3              	100.00%		H3GSD7              	100.00%
Bootstrap support for A8J5W3 as seed ortholog is 100%.
Bootstrap support for H3GSD7 as seed ortholog is 100%.

Group of orthologs #486. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.ramorum:351

A8JDN9              	100.00%		H3GAM5              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 100%.
Bootstrap support for H3GAM5 as seed ortholog is 100%.

Group of orthologs #487. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.ramorum:351

A8IUG5              	100.00%		H3GU39              	100.00%
Bootstrap support for A8IUG5 as seed ortholog is 100%.
Bootstrap support for H3GU39 as seed ortholog is 100%.

Group of orthologs #488. Best score 350 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.ramorum:350

A8JGF7              	100.00%		H3G9W9              	100.00%
Bootstrap support for A8JGF7 as seed ortholog is 57%.
Alternative seed ortholog is A8I2V9 (8 bits away from this cluster)
Bootstrap support for H3G9W9 as seed ortholog is 100%.

Group of orthologs #489. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 P.ramorum:349

A8J7Z3              	100.00%		H3G9A7              	100.00%
A8JD38              	9.00%		H3GAY7              	94.12%
                    	       		H3G8Q5              	64.80%
Bootstrap support for A8J7Z3 as seed ortholog is 100%.
Bootstrap support for H3G9A7 as seed ortholog is 100%.

Group of orthologs #490. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.ramorum:349

A8HX38              	100.00%		H3G8L8              	100.00%
                    	       		H3G8M4              	100.00%
Bootstrap support for A8HX38 as seed ortholog is 99%.
Bootstrap support for H3G8L8 as seed ortholog is 100%.
Bootstrap support for H3G8M4 as seed ortholog is 100%.

Group of orthologs #491. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:184

A8HMC7              	100.00%		H3GRU7              	100.00%
                    	       		H3G534              	19.19%
Bootstrap support for A8HMC7 as seed ortholog is 83%.
Bootstrap support for H3GRU7 as seed ortholog is 99%.

Group of orthologs #492. Best score 348 bits
Score difference with first non-orthologous sequence - C.reinhardtii:348 P.ramorum:348

A8J000              	100.00%		H3G8B6              	100.00%
A8IR49              	44.23%		
Bootstrap support for A8J000 as seed ortholog is 100%.
Bootstrap support for H3G8B6 as seed ortholog is 100%.

Group of orthologs #493. Best score 348 bits
Score difference with first non-orthologous sequence - C.reinhardtii:348 P.ramorum:348

A8HS48              	100.00%		H3G898              	100.00%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for H3G898 as seed ortholog is 100%.

Group of orthologs #494. Best score 348 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 P.ramorum:348

A8IIN4              	100.00%		H3G7N7              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 100%.
Bootstrap support for H3G7N7 as seed ortholog is 100%.

Group of orthologs #495. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.ramorum:347

A8I0A0              	100.00%		H3G884              	100.00%
Bootstrap support for A8I0A0 as seed ortholog is 100%.
Bootstrap support for H3G884 as seed ortholog is 100%.

Group of orthologs #496. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:347

A8IR24              	100.00%		H3G9L1              	100.00%
Bootstrap support for A8IR24 as seed ortholog is 99%.
Bootstrap support for H3G9L1 as seed ortholog is 100%.

Group of orthologs #497. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.ramorum:347

A8JGK5              	100.00%		H3G7Y3              	100.00%
Bootstrap support for A8JGK5 as seed ortholog is 100%.
Bootstrap support for H3G7Y3 as seed ortholog is 100%.

Group of orthologs #498. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 P.ramorum:346

A8IWP9              	100.00%		H3GYV5              	100.00%
                    	       		H3GYW6              	20.29%
Bootstrap support for A8IWP9 as seed ortholog is 100%.
Bootstrap support for H3GYV5 as seed ortholog is 100%.

Group of orthologs #499. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 P.ramorum:290

A8HR57              	100.00%		H3GLQ1              	100.00%
Bootstrap support for A8HR57 as seed ortholog is 100%.
Bootstrap support for H3GLQ1 as seed ortholog is 100%.

Group of orthologs #500. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 P.ramorum:346

A8IGR4              	100.00%		H3GEK8              	100.00%
Bootstrap support for A8IGR4 as seed ortholog is 100%.
Bootstrap support for H3GEK8 as seed ortholog is 100%.

Group of orthologs #501. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 P.ramorum:346

A8IWJ3              	100.00%		H3G9E0              	100.00%
Bootstrap support for A8IWJ3 as seed ortholog is 100%.
Bootstrap support for H3G9E0 as seed ortholog is 100%.

Group of orthologs #502. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.ramorum:27

A8J326              	100.00%		H3GX82              	100.00%
Bootstrap support for A8J326 as seed ortholog is 100%.
Bootstrap support for H3GX82 as seed ortholog is 72%.
Alternative seed ortholog is H3GGA5 (27 bits away from this cluster)

Group of orthologs #503. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:344 P.ramorum:344

A8HX70              	100.00%		H3HDB8              	100.00%
A8IYM0              	35.12%		
Bootstrap support for A8HX70 as seed ortholog is 100%.
Bootstrap support for H3HDB8 as seed ortholog is 100%.

Group of orthologs #504. Best score 343 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.ramorum:284

A8IEW6              	100.00%		H3G8I5              	100.00%
Bootstrap support for A8IEW6 as seed ortholog is 100%.
Bootstrap support for H3G8I5 as seed ortholog is 100%.

Group of orthologs #505. Best score 343 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.ramorum:95

A8J338              	100.00%		H3G7E4              	100.00%
Bootstrap support for A8J338 as seed ortholog is 94%.
Bootstrap support for H3G7E4 as seed ortholog is 99%.

Group of orthologs #506. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.ramorum:81

A8JDQ7              	100.00%		H3H125              	100.00%
A8J8T7              	45.55%		
Bootstrap support for A8JDQ7 as seed ortholog is 71%.
Alternative seed ortholog is Q695H0 (34 bits away from this cluster)
Bootstrap support for H3H125 as seed ortholog is 89%.

Group of orthologs #507. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 P.ramorum:173

A8HMQ7              	100.00%		H3G9Y7              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for H3G9Y7 as seed ortholog is 99%.

Group of orthologs #508. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:209

A8I2S8              	100.00%		H3GNZ8              	100.00%
Bootstrap support for A8I2S8 as seed ortholog is 100%.
Bootstrap support for H3GNZ8 as seed ortholog is 100%.

Group of orthologs #509. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 P.ramorum:53

A8HNP6              	100.00%		H3G9E3              	100.00%
                    	       		H3G9R2              	95.72%
                    	       		H3G9W5              	70.80%
                    	       		H3GB17              	52.75%
                    	       		H3GB55              	42.20%
                    	       		H3GAU1              	41.74%
                    	       		H3H552              	32.72%
                    	       		H3GB69              	27.06%
                    	       		H3H839              	11.77%
                    	       		H3H1B3              	5.96%
                    	       		H3G8B3              	5.81%
Bootstrap support for A8HNP6 as seed ortholog is 100%.
Bootstrap support for H3G9E3 as seed ortholog is 83%.

Group of orthologs #510. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:61

A8IEX1              	100.00%		H3GF97              	100.00%
                    	       		H3GF95              	64.63%
                    	       		H3GF55              	36.29%
                    	       		H3GIT9              	25.00%
Bootstrap support for A8IEX1 as seed ortholog is 53%.
Alternative seed ortholog is A8IVZ2 (19 bits away from this cluster)
Bootstrap support for H3GF97 as seed ortholog is 88%.

Group of orthologs #511. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.ramorum:341

A8J1U3              	100.00%		H3G9J1              	100.00%
Bootstrap support for A8J1U3 as seed ortholog is 100%.
Bootstrap support for H3G9J1 as seed ortholog is 100%.

Group of orthologs #512. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.ramorum:49

A8ISU1              	100.00%		H3GAB6              	100.00%
Bootstrap support for A8ISU1 as seed ortholog is 100%.
Bootstrap support for H3GAB6 as seed ortholog is 94%.

Group of orthologs #513. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 P.ramorum:340

A8HXN9              	100.00%		H3GT71              	100.00%
Bootstrap support for A8HXN9 as seed ortholog is 100%.
Bootstrap support for H3GT71 as seed ortholog is 100%.

Group of orthologs #514. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.ramorum:339

A8ILL5              	100.00%		H3GA62              	100.00%
Bootstrap support for A8ILL5 as seed ortholog is 100%.
Bootstrap support for H3GA62 as seed ortholog is 100%.

Group of orthologs #515. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 P.ramorum:339

A8J7S6              	100.00%		H3G782              	100.00%
Bootstrap support for A8J7S6 as seed ortholog is 100%.
Bootstrap support for H3G782 as seed ortholog is 100%.

Group of orthologs #516. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.ramorum:254

Q84X74              	100.00%		H3G9X5              	100.00%
                    	       		H3GV89              	72.78%
Bootstrap support for Q84X74 as seed ortholog is 100%.
Bootstrap support for H3G9X5 as seed ortholog is 100%.

Group of orthologs #517. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:338 P.ramorum:338

P93106              	100.00%		H3GAF9              	100.00%
A8JHU0              	7.20%		
Bootstrap support for P93106 as seed ortholog is 100%.
Bootstrap support for H3GAF9 as seed ortholog is 100%.

Group of orthologs #518. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.ramorum:338

A8HM38              	100.00%		H3H3A8              	100.00%
Bootstrap support for A8HM38 as seed ortholog is 100%.
Bootstrap support for H3H3A8 as seed ortholog is 100%.

Group of orthologs #519. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 P.ramorum:337

A8J149              	100.00%		H3G8R9              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for H3G8R9 as seed ortholog is 100%.

Group of orthologs #520. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.ramorum:337

A8JI52              	100.00%		H3G9S5              	100.00%
Bootstrap support for A8JI52 as seed ortholog is 100%.
Bootstrap support for H3G9S5 as seed ortholog is 100%.

Group of orthologs #521. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:336

Q9S7V1              	100.00%		H3GIT6              	100.00%
                    	       		H3GIT7              	48.44%
Bootstrap support for Q9S7V1 as seed ortholog is 99%.
Bootstrap support for H3GIT6 as seed ortholog is 100%.

Group of orthologs #522. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.ramorum:336

A8IYJ4              	100.00%		H3G7L2              	100.00%
Bootstrap support for A8IYJ4 as seed ortholog is 99%.
Bootstrap support for H3G7L2 as seed ortholog is 100%.

Group of orthologs #523. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.ramorum:262

A8JDD2              	100.00%		H3GAF7              	100.00%
Bootstrap support for A8JDD2 as seed ortholog is 100%.
Bootstrap support for H3GAF7 as seed ortholog is 100%.

Group of orthologs #524. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 P.ramorum:226

A8HNP3              	100.00%		H3HCD9              	100.00%
Bootstrap support for A8HNP3 as seed ortholog is 100%.
Bootstrap support for H3HCD9 as seed ortholog is 100%.

Group of orthologs #525. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 P.ramorum:336

A8JAY5              	100.00%		H3H2J7              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for H3H2J7 as seed ortholog is 100%.

Group of orthologs #526. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 P.ramorum:336

Q68RJ5              	100.00%		H3H301              	100.00%
Bootstrap support for Q68RJ5 as seed ortholog is 100%.
Bootstrap support for H3H301 as seed ortholog is 100%.

Group of orthologs #527. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:76

A8J1Y2              	100.00%		H3G907              	100.00%
                    	       		H3GL33              	5.99%
Bootstrap support for A8J1Y2 as seed ortholog is 99%.
Bootstrap support for H3G907 as seed ortholog is 95%.

Group of orthologs #528. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 P.ramorum:334

A8HZX4              	100.00%		H3GPE8              	100.00%
Bootstrap support for A8HZX4 as seed ortholog is 100%.
Bootstrap support for H3GPE8 as seed ortholog is 100%.

Group of orthologs #529. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.ramorum:334

A8J8V5              	100.00%		H3G7T3              	100.00%
Bootstrap support for A8J8V5 as seed ortholog is 100%.
Bootstrap support for H3G7T3 as seed ortholog is 100%.

Group of orthologs #530. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 P.ramorum:334

A8JEW4              	100.00%		H3G8G2              	100.00%
Bootstrap support for A8JEW4 as seed ortholog is 100%.
Bootstrap support for H3G8G2 as seed ortholog is 100%.

Group of orthologs #531. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.ramorum:161

A8JGX5              	100.00%		H3G9W1              	100.00%
Bootstrap support for A8JGX5 as seed ortholog is 100%.
Bootstrap support for H3G9W1 as seed ortholog is 100%.

Group of orthologs #532. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 P.ramorum:334

A8JHS9              	100.00%		H3GAK1              	100.00%
Bootstrap support for A8JHS9 as seed ortholog is 100%.
Bootstrap support for H3GAK1 as seed ortholog is 100%.

Group of orthologs #533. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 P.ramorum:334

A8HY57              	100.00%		H3HC64              	100.00%
Bootstrap support for A8HY57 as seed ortholog is 100%.
Bootstrap support for H3HC64 as seed ortholog is 100%.

Group of orthologs #534. Best score 333 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 P.ramorum:3

A8HSR5              	100.00%		H3G5Y8              	100.00%
Bootstrap support for A8HSR5 as seed ortholog is 100%.
Bootstrap support for H3G5Y8 as seed ortholog is 52%.
Alternative seed ortholog is H3HCE7 (3 bits away from this cluster)

Group of orthologs #535. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:237

A8HY75              	100.00%		H3G945              	100.00%
Bootstrap support for A8HY75 as seed ortholog is 100%.
Bootstrap support for H3G945 as seed ortholog is 100%.

Group of orthologs #536. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.ramorum:30

A8IL68              	100.00%		H3H1A3              	100.00%
Bootstrap support for A8IL68 as seed ortholog is 96%.
Bootstrap support for H3H1A3 as seed ortholog is 73%.
Alternative seed ortholog is H3GD15 (30 bits away from this cluster)

Group of orthologs #537. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 P.ramorum:331

A8IBR0              	100.00%		H3GCA3              	100.00%
Bootstrap support for A8IBR0 as seed ortholog is 100%.
Bootstrap support for H3GCA3 as seed ortholog is 100%.

Group of orthologs #538. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.ramorum:95

A8JD99              	100.00%		H3GAW1              	100.00%
Bootstrap support for A8JD99 as seed ortholog is 100%.
Bootstrap support for H3GAW1 as seed ortholog is 98%.

Group of orthologs #539. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:330 P.ramorum:330

A8JHX0              	100.00%		H3G9U4              	100.00%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for H3G9U4 as seed ortholog is 100%.

Group of orthologs #540. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:330 P.ramorum:330

A8JCM8              	100.00%		H3H4C8              	100.00%
Bootstrap support for A8JCM8 as seed ortholog is 100%.
Bootstrap support for H3H4C8 as seed ortholog is 100%.

Group of orthologs #541. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.ramorum:330

Q6UPR0              	100.00%		H3HAN9              	100.00%
Bootstrap support for Q6UPR0 as seed ortholog is 100%.
Bootstrap support for H3HAN9 as seed ortholog is 100%.

Group of orthologs #542. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 P.ramorum:329

A8I4P5              	100.00%		H3G9T2              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for H3G9T2 as seed ortholog is 100%.

Group of orthologs #543. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 P.ramorum:329

A8JGV6              	100.00%		H3GAR2              	100.00%
Bootstrap support for A8JGV6 as seed ortholog is 100%.
Bootstrap support for H3GAR2 as seed ortholog is 100%.

Group of orthologs #544. Best score 328 bits
Score difference with first non-orthologous sequence - C.reinhardtii:328 P.ramorum:328

A8J7E8              	100.00%		H3G760              	100.00%
A8JA94              	45.54%		
Bootstrap support for A8J7E8 as seed ortholog is 100%.
Bootstrap support for H3G760 as seed ortholog is 100%.

Group of orthologs #545. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:327

A8JEQ2              	100.00%		H3G8Q2              	100.00%
                    	       		H3G8Q1              	72.25%
                    	       		H3GBA6              	26.96%
                    	       		H3G6L6              	25.92%
                    	       		H3GCX4              	25.65%
                    	       		H3G8A2              	25.39%
                    	       		H3G9N4              	22.77%
                    	       		H3G6L8              	22.51%
                    	       		H3G6S3              	21.99%
                    	       		H3G6L9              	21.20%
                    	       		H3G9S3              	19.90%
                    	       		H3G6U7              	19.63%
                    	       		H3GA92              	19.11%
                    	       		H3GA91              	18.32%
                    	       		H3GCW9              	18.32%
                    	       		H3GCX6              	18.06%
                    	       		H3GCW8              	16.75%
                    	       		H3GA93              	14.92%
                    	       		H3G864              	12.83%
                    	       		H3GYJ8              	12.57%
                    	       		H3GCX7              	11.26%
Bootstrap support for A8JEQ2 as seed ortholog is 100%.
Bootstrap support for H3G8Q2 as seed ortholog is 100%.

Group of orthologs #546. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.ramorum:327

A8HQP0              	100.00%		H3G883              	100.00%
Bootstrap support for A8HQP0 as seed ortholog is 100%.
Bootstrap support for H3G883 as seed ortholog is 100%.

Group of orthologs #547. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.ramorum:118

A8J195              	100.00%		H3G6T1              	100.00%
Bootstrap support for A8J195 as seed ortholog is 100%.
Bootstrap support for H3G6T1 as seed ortholog is 100%.

Group of orthologs #548. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 P.ramorum:215

A8IYT7              	100.00%		H3G9H1              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for H3G9H1 as seed ortholog is 100%.

Group of orthologs #549. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 P.ramorum:327

A8JG39              	100.00%		H3GW62              	100.00%
Bootstrap support for A8JG39 as seed ortholog is 100%.
Bootstrap support for H3GW62 as seed ortholog is 100%.

Group of orthologs #550. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:326

A8IS63              	100.00%		H3HCW1              	100.00%
Bootstrap support for A8IS63 as seed ortholog is 99%.
Bootstrap support for H3HCW1 as seed ortholog is 100%.

Group of orthologs #551. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.ramorum:325

A8IXB8              	100.00%		H3G8W6              	100.00%
Bootstrap support for A8IXB8 as seed ortholog is 100%.
Bootstrap support for H3G8W6 as seed ortholog is 100%.

Group of orthologs #552. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 P.ramorum:324

A8HX04              	100.00%		H3G7S9              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for H3G7S9 as seed ortholog is 100%.

Group of orthologs #553. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.ramorum:228

A8IRX5              	100.00%		H3G7J3              	100.00%
Bootstrap support for A8IRX5 as seed ortholog is 100%.
Bootstrap support for H3G7J3 as seed ortholog is 100%.

Group of orthologs #554. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:72

A8J8H3              	100.00%		H3G710              	100.00%
Bootstrap support for A8J8H3 as seed ortholog is 72%.
Alternative seed ortholog is A8IXP8 (19 bits away from this cluster)
Bootstrap support for H3G710 as seed ortholog is 99%.

Group of orthologs #555. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:71

A8JHQ7              	100.00%		H3G8X5              	100.00%
Bootstrap support for A8JHQ7 as seed ortholog is 100%.
Bootstrap support for H3G8X5 as seed ortholog is 99%.

Group of orthologs #556. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:322

A8HRR1              	100.00%		H3G570              	100.00%
Bootstrap support for A8HRR1 as seed ortholog is 99%.
Bootstrap support for H3G570 as seed ortholog is 100%.

Group of orthologs #557. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 P.ramorum:94

A8J018              	100.00%		H3GHW5              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for H3GHW5 as seed ortholog is 99%.

Group of orthologs #558. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 P.ramorum:322

A8HVZ2              	100.00%		H3HDD5              	100.00%
Bootstrap support for A8HVZ2 as seed ortholog is 100%.
Bootstrap support for H3HDD5 as seed ortholog is 100%.

Group of orthologs #559. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:83

A8JBW0              	100.00%		H3G9P4              	100.00%
A8JBV2              	41.35%		H3GAJ5              	36.11%
                    	       		H3GB81              	32.87%
                    	       		H3G9B6              	31.48%
                    	       		H3G9B4              	30.56%
                    	       		H3H1C9              	24.54%
                    	       		H3GB00              	22.92%
                    	       		H3GAI6              	21.99%
                    	       		H3G7J7              	21.53%
                    	       		H3G8H3              	15.97%
Bootstrap support for A8JBW0 as seed ortholog is 99%.
Bootstrap support for H3G9P4 as seed ortholog is 97%.

Group of orthologs #560. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 P.ramorum:320

A8J2J9              	100.00%		H3G9S6              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for H3G9S6 as seed ortholog is 100%.

Group of orthologs #561. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 P.ramorum:320

A8J7D9              	100.00%		H3HED0              	100.00%
Bootstrap support for A8J7D9 as seed ortholog is 100%.
Bootstrap support for H3HED0 as seed ortholog is 100%.

Group of orthologs #562. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:113

A8IL29              	100.00%		H3G8L2              	100.00%
                    	       		H3G8L3              	100.00%
Bootstrap support for A8IL29 as seed ortholog is 99%.
Bootstrap support for H3G8L2 as seed ortholog is 100%.
Bootstrap support for H3G8L3 as seed ortholog is 100%.

Group of orthologs #563. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.ramorum:319

A8J7U9              	100.00%		H3G5H1              	100.00%
Bootstrap support for A8J7U9 as seed ortholog is 100%.
Bootstrap support for H3G5H1 as seed ortholog is 100%.

Group of orthologs #564. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.ramorum:319

A8IXQ0              	100.00%		H3GG46              	100.00%
Bootstrap support for A8IXQ0 as seed ortholog is 99%.
Bootstrap support for H3GG46 as seed ortholog is 100%.

Group of orthologs #565. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.ramorum:319

A8IR74              	100.00%		H3H115              	100.00%
Bootstrap support for A8IR74 as seed ortholog is 100%.
Bootstrap support for H3H115 as seed ortholog is 100%.

Group of orthologs #566. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.ramorum:319

A8J9B2              	100.00%		H3GTM3              	100.00%
Bootstrap support for A8J9B2 as seed ortholog is 100%.
Bootstrap support for H3GTM3 as seed ortholog is 100%.

Group of orthologs #567. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:87

A8J0Y2              	100.00%		H3HBD0              	100.00%
Bootstrap support for A8J0Y2 as seed ortholog is 100%.
Bootstrap support for H3HBD0 as seed ortholog is 98%.

Group of orthologs #568. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:12

Q8LKK4              	100.00%		H3HBB4              	100.00%
Bootstrap support for Q8LKK4 as seed ortholog is 99%.
Bootstrap support for H3HBB4 as seed ortholog is 36%.
Alternative seed ortholog is H3GXD9 (12 bits away from this cluster)

Group of orthologs #569. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 P.ramorum:318

A8J7F8              	100.00%		H3G9N0              	100.00%
Bootstrap support for A8J7F8 as seed ortholog is 100%.
Bootstrap support for H3G9N0 as seed ortholog is 100%.

Group of orthologs #570. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 P.ramorum:318

Q84JV7              	100.00%		H3GME6              	100.00%
Bootstrap support for Q84JV7 as seed ortholog is 100%.
Bootstrap support for H3GME6 as seed ortholog is 100%.

Group of orthologs #571. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 P.ramorum:317

A8HXG8              	100.00%		H3GN45              	100.00%
Bootstrap support for A8HXG8 as seed ortholog is 100%.
Bootstrap support for H3GN45 as seed ortholog is 100%.

Group of orthologs #572. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 P.ramorum:317

A8JG49              	100.00%		H3GBK0              	100.00%
Bootstrap support for A8JG49 as seed ortholog is 100%.
Bootstrap support for H3GBK0 as seed ortholog is 100%.

Group of orthologs #573. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:151

Q9SNV7              	100.00%		H3G801              	100.00%
Bootstrap support for Q9SNV7 as seed ortholog is 99%.
Bootstrap support for H3G801 as seed ortholog is 99%.

Group of orthologs #574. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:316 P.ramorum:316

A8JDY6              	100.00%		H3GCP8              	100.00%
                    	       		H3GCP5              	99.87%
                    	       		H3GCP7              	35.43%
                    	       		H3GCN7              	17.84%
                    	       		H3GCN8              	17.46%
Bootstrap support for A8JDY6 as seed ortholog is 100%.
Bootstrap support for H3GCP8 as seed ortholog is 100%.

Group of orthologs #575. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 P.ramorum:315

A8JGS6              	100.00%		H3HBQ2              	100.00%
A8JDK4              	9.90%		
Bootstrap support for A8JGS6 as seed ortholog is 100%.
Bootstrap support for H3HBQ2 as seed ortholog is 100%.

Group of orthologs #576. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:315 P.ramorum:315

A8JIP6              	100.00%		H3GAV2              	100.00%
Bootstrap support for A8JIP6 as seed ortholog is 100%.
Bootstrap support for H3GAV2 as seed ortholog is 100%.

Group of orthologs #577. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.ramorum:314

A8HQI6              	100.00%		H3GBZ7              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 100%.
Bootstrap support for H3GBZ7 as seed ortholog is 100%.

Group of orthologs #578. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 P.ramorum:314

A8J8T5              	100.00%		H3G7V7              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for H3G7V7 as seed ortholog is 100%.

Group of orthologs #579. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.ramorum:313

A8HVE6              	100.00%		H3G609              	100.00%
                    	       		H3G607              	45.13%
Bootstrap support for A8HVE6 as seed ortholog is 100%.
Bootstrap support for H3G609 as seed ortholog is 100%.

Group of orthologs #580. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.ramorum:313

A8J8C7              	100.00%		H3GIL6              	100.00%
                    	       		H3G8H2              	75.64%
Bootstrap support for A8J8C7 as seed ortholog is 100%.
Bootstrap support for H3GIL6 as seed ortholog is 100%.

Group of orthologs #581. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:313

A8IKQ0              	100.00%		H3HC28              	100.00%
                    	       		H3GLI1              	64.85%
Bootstrap support for A8IKQ0 as seed ortholog is 100%.
Bootstrap support for H3HC28 as seed ortholog is 100%.

Group of orthologs #582. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:313

A8HQB8              	100.00%		H3G784              	100.00%
Bootstrap support for A8HQB8 as seed ortholog is 99%.
Bootstrap support for H3G784 as seed ortholog is 100%.

Group of orthologs #583. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.ramorum:313

A8IDI5              	100.00%		H3G601              	100.00%
Bootstrap support for A8IDI5 as seed ortholog is 100%.
Bootstrap support for H3G601 as seed ortholog is 100%.

Group of orthologs #584. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:143

A8IZ65              	100.00%		H3G737              	100.00%
Bootstrap support for A8IZ65 as seed ortholog is 100%.
Bootstrap support for H3G737 as seed ortholog is 99%.

Group of orthologs #585. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.ramorum:313

A8IM30              	100.00%		H3GG34              	100.00%
Bootstrap support for A8IM30 as seed ortholog is 100%.
Bootstrap support for H3GG34 as seed ortholog is 100%.

Group of orthologs #586. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.ramorum:33

A8IN76              	100.00%		H3H1K4              	100.00%
Bootstrap support for A8IN76 as seed ortholog is 100%.
Bootstrap support for H3H1K4 as seed ortholog is 77%.

Group of orthologs #587. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 P.ramorum:312

A8HMT4              	100.00%		H3GA73              	100.00%
Bootstrap support for A8HMT4 as seed ortholog is 100%.
Bootstrap support for H3GA73 as seed ortholog is 100%.

Group of orthologs #588. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 P.ramorum:312

A8J244              	100.00%		H3G9N7              	100.00%
Bootstrap support for A8J244 as seed ortholog is 100%.
Bootstrap support for H3G9N7 as seed ortholog is 100%.

Group of orthologs #589. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 P.ramorum:312

A8J795              	100.00%		H3G868              	100.00%
Bootstrap support for A8J795 as seed ortholog is 100%.
Bootstrap support for H3G868 as seed ortholog is 100%.

Group of orthologs #590. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.ramorum:311

A8I670              	100.00%		H3G8Y8              	100.00%
Bootstrap support for A8I670 as seed ortholog is 100%.
Bootstrap support for H3G8Y8 as seed ortholog is 100%.

Group of orthologs #591. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:76

A8JFV3              	100.00%		H3G866              	100.00%
Bootstrap support for A8JFV3 as seed ortholog is 99%.
Bootstrap support for H3G866 as seed ortholog is 97%.

Group of orthologs #592. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.ramorum:311

A8JDM6              	100.00%		H3GGT2              	100.00%
Bootstrap support for A8JDM6 as seed ortholog is 100%.
Bootstrap support for H3GGT2 as seed ortholog is 100%.

Group of orthologs #593. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.ramorum:310

A8J1A7              	100.00%		H3GHI8              	100.00%
Bootstrap support for A8J1A7 as seed ortholog is 100%.
Bootstrap support for H3GHI8 as seed ortholog is 100%.

Group of orthologs #594. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 P.ramorum:310

A8JAL7              	100.00%		H3HAT3              	100.00%
Bootstrap support for A8JAL7 as seed ortholog is 100%.
Bootstrap support for H3HAT3 as seed ortholog is 100%.

Group of orthologs #595. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:309

A8IS24              	100.00%		H3GR83              	100.00%
Bootstrap support for A8IS24 as seed ortholog is 97%.
Bootstrap support for H3GR83 as seed ortholog is 100%.

Group of orthologs #596. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 P.ramorum:141

A8HWK6              	100.00%		H3G7E6              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 100%.
Bootstrap support for H3G7E6 as seed ortholog is 100%.

Group of orthologs #597. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 P.ramorum:308

A8I5X1              	100.00%		H3GLH5              	100.00%
Bootstrap support for A8I5X1 as seed ortholog is 100%.
Bootstrap support for H3GLH5 as seed ortholog is 100%.

Group of orthologs #598. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.ramorum:307

A8IX13              	100.00%		H3GUH6              	100.00%
                    	       		H3GZ71              	16.28%
Bootstrap support for A8IX13 as seed ortholog is 100%.
Bootstrap support for H3GUH6 as seed ortholog is 100%.

Group of orthologs #599. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.ramorum:307

A8HUK6              	100.00%		H3GBW1              	100.00%
Bootstrap support for A8HUK6 as seed ortholog is 100%.
Bootstrap support for H3GBW1 as seed ortholog is 100%.

Group of orthologs #600. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.ramorum:307

A8J5A6              	100.00%		H3G6U8              	100.00%
Bootstrap support for A8J5A6 as seed ortholog is 100%.
Bootstrap support for H3G6U8 as seed ortholog is 100%.

Group of orthologs #601. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.ramorum:306

A8J980              	100.00%		H3G7H3              	100.00%
Bootstrap support for A8J980 as seed ortholog is 100%.
Bootstrap support for H3G7H3 as seed ortholog is 100%.

Group of orthologs #602. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.ramorum:134

A8JBB8              	100.00%		H3GV09              	100.00%
Bootstrap support for A8JBB8 as seed ortholog is 100%.
Bootstrap support for H3GV09 as seed ortholog is 99%.

Group of orthologs #603. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.ramorum:136

A8IRT2              	100.00%		H3G8U7              	100.00%
Bootstrap support for A8IRT2 as seed ortholog is 100%.
Bootstrap support for H3G8U7 as seed ortholog is 100%.

Group of orthologs #604. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 P.ramorum:304

A8J633              	100.00%		H3G994              	100.00%
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for H3G994 as seed ortholog is 100%.

Group of orthologs #605. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 P.ramorum:304

A8J6L8              	100.00%		H3HCZ8              	100.00%
Bootstrap support for A8J6L8 as seed ortholog is 100%.
Bootstrap support for H3HCZ8 as seed ortholog is 100%.

Group of orthologs #606. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:303 P.ramorum:303

A8JDN3              	100.00%		H3G9V8              	100.00%
Bootstrap support for A8JDN3 as seed ortholog is 100%.
Bootstrap support for H3G9V8 as seed ortholog is 100%.

Group of orthologs #607. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.ramorum:302

A8ICN2              	100.00%		H3GAJ0              	100.00%
A8HNN4              	50.00%		
A8HNN6              	48.27%		
Bootstrap support for A8ICN2 as seed ortholog is 100%.
Bootstrap support for H3GAJ0 as seed ortholog is 100%.

Group of orthologs #608. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.ramorum:103

A8JDZ5              	100.00%		H3H4U4              	100.00%
A8IUU0              	27.25%		
Bootstrap support for A8JDZ5 as seed ortholog is 83%.
Bootstrap support for H3H4U4 as seed ortholog is 98%.

Group of orthologs #609. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:302

A8HR39              	100.00%		H3G8M2              	100.00%
Bootstrap support for A8HR39 as seed ortholog is 95%.
Bootstrap support for H3G8M2 as seed ortholog is 100%.

Group of orthologs #610. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.ramorum:302

A8IWF2              	100.00%		H3GXW6              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 100%.
Bootstrap support for H3GXW6 as seed ortholog is 100%.

Group of orthologs #611. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.ramorum:220

A8J2M2              	100.00%		H3GW08              	100.00%
Bootstrap support for A8J2M2 as seed ortholog is 100%.
Bootstrap support for H3GW08 as seed ortholog is 100%.

Group of orthologs #612. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.ramorum:302

A8J0V5              	100.00%		H3HCF7              	100.00%
Bootstrap support for A8J0V5 as seed ortholog is 100%.
Bootstrap support for H3HCF7 as seed ortholog is 100%.

Group of orthologs #613. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:190

A8J7X9              	100.00%		H3G4X6              	100.00%
Bootstrap support for A8J7X9 as seed ortholog is 99%.
Bootstrap support for H3G4X6 as seed ortholog is 100%.

Group of orthologs #614. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.ramorum:113

A8JHB7              	100.00%		H3G582              	100.00%
                    	       		H3H2J9              	63.36%
                    	       		H3G579              	54.03%
                    	       		H3H2L1              	46.54%
Bootstrap support for A8JHB7 as seed ortholog is 100%.
Bootstrap support for H3G582 as seed ortholog is 99%.

Group of orthologs #615. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.ramorum:300

A8IEL8              	100.00%		H3GAJ1              	100.00%
Bootstrap support for A8IEL8 as seed ortholog is 100%.
Bootstrap support for H3GAJ1 as seed ortholog is 100%.

Group of orthologs #616. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:215

A8HYK4              	100.00%		H3GU25              	100.00%
Bootstrap support for A8HYK4 as seed ortholog is 100%.
Bootstrap support for H3GU25 as seed ortholog is 100%.

Group of orthologs #617. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.ramorum:300

A8ISE0              	100.00%		H3GY08              	100.00%
Bootstrap support for A8ISE0 as seed ortholog is 100%.
Bootstrap support for H3GY08 as seed ortholog is 100%.

Group of orthologs #618. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.ramorum:202

O48949              	100.00%		H3G8N1              	100.00%
Bootstrap support for O48949 as seed ortholog is 100%.
Bootstrap support for H3G8N1 as seed ortholog is 100%.

Group of orthologs #619. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:36

A8JBH0              	100.00%		H3G6Z5              	100.00%
                    	       		H3GYY6              	13.26%
Bootstrap support for A8JBH0 as seed ortholog is 93%.
Bootstrap support for H3G6Z5 as seed ortholog is 79%.

Group of orthologs #620. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 P.ramorum:299

A8IAM0              	100.00%		H3GH86              	100.00%
Bootstrap support for A8IAM0 as seed ortholog is 100%.
Bootstrap support for H3GH86 as seed ortholog is 100%.

Group of orthologs #621. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:101

A8IZJ9              	100.00%		H3G9Y3              	100.00%
Bootstrap support for A8IZJ9 as seed ortholog is 98%.
Bootstrap support for H3G9Y3 as seed ortholog is 99%.

Group of orthologs #622. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:154

A8IRR7              	100.00%		H3GMA5              	100.00%
Bootstrap support for A8IRR7 as seed ortholog is 98%.
Bootstrap support for H3GMA5 as seed ortholog is 99%.

Group of orthologs #623. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 P.ramorum:258

A8J4X1              	100.00%		H3H1I2              	100.00%
Bootstrap support for A8J4X1 as seed ortholog is 100%.
Bootstrap support for H3H1I2 as seed ortholog is 100%.

Group of orthologs #624. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 P.ramorum:298

A8IRE2              	100.00%		H3G9M2              	100.00%
Bootstrap support for A8IRE2 as seed ortholog is 100%.
Bootstrap support for H3G9M2 as seed ortholog is 100%.

Group of orthologs #625. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 P.ramorum:298

A8IF44              	100.00%		H3GIQ0              	100.00%
Bootstrap support for A8IF44 as seed ortholog is 100%.
Bootstrap support for H3GIQ0 as seed ortholog is 100%.

Group of orthologs #626. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.ramorum:121

A8HPT5              	100.00%		H3GA13              	100.00%
                    	       		H3HAB9              	68.08%
Bootstrap support for A8HPT5 as seed ortholog is 79%.
Bootstrap support for H3GA13 as seed ortholog is 99%.

Group of orthologs #627. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 P.ramorum:297

A8HP55              	100.00%		H3G8C3              	100.00%
Bootstrap support for A8HP55 as seed ortholog is 100%.
Bootstrap support for H3G8C3 as seed ortholog is 100%.

Group of orthologs #628. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 P.ramorum:297

A8J2I5              	100.00%		H3GAN3              	100.00%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for H3GAN3 as seed ortholog is 100%.

Group of orthologs #629. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 P.ramorum:297

A8JAW4              	100.00%		H3G913              	100.00%
Bootstrap support for A8JAW4 as seed ortholog is 100%.
Bootstrap support for H3G913 as seed ortholog is 100%.

Group of orthologs #630. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:45

A8JD64              	100.00%		H3G8M8              	100.00%
Bootstrap support for A8JD64 as seed ortholog is 99%.
Bootstrap support for H3G8M8 as seed ortholog is 98%.

Group of orthologs #631. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:296

A8JBH9              	100.00%		H3G9U3              	100.00%
                    	       		H3G9U6              	43.41%
                    	       		H3GAS3              	17.44%
                    	       		H3GME0              	16.67%
                    	       		H3G908              	15.12%
Bootstrap support for A8JBH9 as seed ortholog is 99%.
Bootstrap support for H3G9U3 as seed ortholog is 100%.

Group of orthologs #632. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.ramorum:296

A8ID63              	100.00%		H3GAD9              	100.00%
Bootstrap support for A8ID63 as seed ortholog is 100%.
Bootstrap support for H3GAD9 as seed ortholog is 100%.

Group of orthologs #633. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:296

A8IK69              	100.00%		H3G890              	100.00%
Bootstrap support for A8IK69 as seed ortholog is 99%.
Bootstrap support for H3G890 as seed ortholog is 100%.

Group of orthologs #634. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:296 P.ramorum:296

A8JCT4              	100.00%		H3G854              	100.00%
Bootstrap support for A8JCT4 as seed ortholog is 100%.
Bootstrap support for H3G854 as seed ortholog is 100%.

Group of orthologs #635. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:296 P.ramorum:230

A8IVX2              	100.00%		H3GU81              	100.00%
Bootstrap support for A8IVX2 as seed ortholog is 100%.
Bootstrap support for H3GU81 as seed ortholog is 100%.

Group of orthologs #636. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 P.ramorum:296

A8J7E9              	100.00%		H3GNT4              	100.00%
Bootstrap support for A8J7E9 as seed ortholog is 100%.
Bootstrap support for H3GNT4 as seed ortholog is 100%.

Group of orthologs #637. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.ramorum:295

A8HQB6              	100.00%		H3G5E3              	100.00%
Bootstrap support for A8HQB6 as seed ortholog is 100%.
Bootstrap support for H3G5E3 as seed ortholog is 100%.

Group of orthologs #638. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.ramorum:167

A8IMW9              	100.00%		H3G791              	100.00%
Bootstrap support for A8IMW9 as seed ortholog is 99%.
Bootstrap support for H3G791 as seed ortholog is 99%.

Group of orthologs #639. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.ramorum:295

A8J6K9              	100.00%		H3G8K1              	100.00%
Bootstrap support for A8J6K9 as seed ortholog is 100%.
Bootstrap support for H3G8K1 as seed ortholog is 100%.

Group of orthologs #640. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.ramorum:133

A8IHI1              	100.00%		H3GAT4              	100.00%
Bootstrap support for A8IHI1 as seed ortholog is 99%.
Bootstrap support for H3GAT4 as seed ortholog is 99%.

Group of orthologs #641. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 P.ramorum:294

A8IQ05              	100.00%		H3GTW5              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for H3GTW5 as seed ortholog is 100%.

Group of orthologs #642. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 P.ramorum:293

A8IKB7              	100.00%		H3G552              	100.00%
Bootstrap support for A8IKB7 as seed ortholog is 100%.
Bootstrap support for H3G552 as seed ortholog is 100%.

Group of orthologs #643. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 P.ramorum:293

A8J825              	100.00%		H3G978              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for H3G978 as seed ortholog is 100%.

Group of orthologs #644. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 P.ramorum:38

A8J955              	100.00%		H3GC21              	100.00%
Bootstrap support for A8J955 as seed ortholog is 100%.
Bootstrap support for H3GC21 as seed ortholog is 82%.

Group of orthologs #645. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 P.ramorum:161

A8JHW6              	100.00%		H3H368              	100.00%
Bootstrap support for A8JHW6 as seed ortholog is 100%.
Bootstrap support for H3H368 as seed ortholog is 99%.

Group of orthologs #646. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.ramorum:292

A8IRY0              	100.00%		H3GYZ5              	100.00%
                    	       		H3GWY5              	66.48%
                    	       		H3GK29              	50.40%
                    	       		H3GSM3              	48.42%
                    	       		H3GH74              	19.30%
                    	       		H3GIJ8              	18.51%
                    	       		H3GMJ3              	6.35%
Bootstrap support for A8IRY0 as seed ortholog is 100%.
Bootstrap support for H3GYZ5 as seed ortholog is 100%.

Group of orthologs #647. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.ramorum:231

A8JEP8              	100.00%		H3GIV4              	100.00%
Bootstrap support for A8JEP8 as seed ortholog is 100%.
Bootstrap support for H3GIV4 as seed ortholog is 100%.

Group of orthologs #648. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:291 P.ramorum:291

A8IBN0              	100.00%		H3H9R8              	100.00%
                    	       		H3GZA4              	99.75%
Bootstrap support for A8IBN0 as seed ortholog is 100%.
Bootstrap support for H3H9R8 as seed ortholog is 100%.

Group of orthologs #649. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:291

A8JGX0              	100.00%		H3GAD3              	100.00%
Bootstrap support for A8JGX0 as seed ortholog is 99%.
Bootstrap support for H3GAD3 as seed ortholog is 100%.

Group of orthologs #650. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:143

A8HPX2              	100.00%		H3G503              	100.00%
Bootstrap support for A8HPX2 as seed ortholog is 99%.
Bootstrap support for H3G503 as seed ortholog is 99%.

Group of orthologs #651. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.ramorum:290

A8HYL2              	100.00%		H3G5M2              	100.00%
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for H3G5M2 as seed ortholog is 100%.

Group of orthologs #652. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.ramorum:290

A8I982              	100.00%		H3G980              	100.00%
Bootstrap support for A8I982 as seed ortholog is 100%.
Bootstrap support for H3G980 as seed ortholog is 100%.

Group of orthologs #653. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.ramorum:290

A8I7W6              	100.00%		H3GAP0              	100.00%
Bootstrap support for A8I7W6 as seed ortholog is 100%.
Bootstrap support for H3GAP0 as seed ortholog is 100%.

Group of orthologs #654. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.ramorum:290

A8I320              	100.00%		H3GGX4              	100.00%
Bootstrap support for A8I320 as seed ortholog is 100%.
Bootstrap support for H3GGX4 as seed ortholog is 100%.

Group of orthologs #655. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 P.ramorum:85

A8I2H7              	100.00%		H3GQH1              	100.00%
Bootstrap support for A8I2H7 as seed ortholog is 96%.
Bootstrap support for H3GQH1 as seed ortholog is 74%.
Alternative seed ortholog is H3H1Y7 (85 bits away from this cluster)

Group of orthologs #656. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.ramorum:290

A8J0Z8              	100.00%		H3GGZ4              	100.00%
Bootstrap support for A8J0Z8 as seed ortholog is 100%.
Bootstrap support for H3GGZ4 as seed ortholog is 100%.

Group of orthologs #657. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.ramorum:240

A8IWB0              	100.00%		H3GYM5              	100.00%
Bootstrap support for A8IWB0 as seed ortholog is 100%.
Bootstrap support for H3GYM5 as seed ortholog is 100%.

Group of orthologs #658. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:289

A8JGD2              	100.00%		H3GV30              	100.00%
A8JAF1              	100.00%		H3GV33              	100.00%
Bootstrap support for A8JGD2 as seed ortholog is 87%.
Bootstrap support for A8JAF1 as seed ortholog is 59%.
Alternative seed ortholog is A8JI60 (54 bits away from this cluster)
Bootstrap support for H3GV30 as seed ortholog is 100%.
Bootstrap support for H3GV33 as seed ortholog is 100%.

Group of orthologs #659. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.ramorum:289

A8I8V6              	100.00%		H3G5G9              	100.00%
Bootstrap support for A8I8V6 as seed ortholog is 100%.
Bootstrap support for H3G5G9 as seed ortholog is 100%.

Group of orthologs #660. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:129

A8I9B0              	100.00%		H3G981              	100.00%
Bootstrap support for A8I9B0 as seed ortholog is 100%.
Bootstrap support for H3G981 as seed ortholog is 100%.

Group of orthologs #661. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.ramorum:289

A8ITQ5              	100.00%		H3G8I1              	100.00%
Bootstrap support for A8ITQ5 as seed ortholog is 100%.
Bootstrap support for H3G8I1 as seed ortholog is 100%.

Group of orthologs #662. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.ramorum:289

A8J9V0              	100.00%		H3G6M9              	100.00%
Bootstrap support for A8J9V0 as seed ortholog is 100%.
Bootstrap support for H3G6M9 as seed ortholog is 100%.

Group of orthologs #663. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.ramorum:110

A8ISC5              	100.00%		H3GW52              	100.00%
                    	       		H3H562              	7.87%
Bootstrap support for A8ISC5 as seed ortholog is 42%.
Alternative seed ortholog is A8J8Y2 (7 bits away from this cluster)
Bootstrap support for H3GW52 as seed ortholog is 98%.

Group of orthologs #664. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 P.ramorum:288

A8HYD8              	100.00%		H3G8Q0              	100.00%
Bootstrap support for A8HYD8 as seed ortholog is 100%.
Bootstrap support for H3G8Q0 as seed ortholog is 100%.

Group of orthologs #665. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 P.ramorum:244

A8I8J2              	100.00%		H3G955              	100.00%
Bootstrap support for A8I8J2 as seed ortholog is 100%.
Bootstrap support for H3G955 as seed ortholog is 100%.

Group of orthologs #666. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 P.ramorum:288

A8ICL5              	100.00%		H3GLH2              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 100%.
Bootstrap support for H3GLH2 as seed ortholog is 100%.

Group of orthologs #667. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 P.ramorum:288

A8J7N7              	100.00%		H3G7F6              	100.00%
Bootstrap support for A8J7N7 as seed ortholog is 100%.
Bootstrap support for H3G7F6 as seed ortholog is 100%.

Group of orthologs #668. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 P.ramorum:287

A8HYL9              	100.00%		H3GS72              	100.00%
Bootstrap support for A8HYL9 as seed ortholog is 100%.
Bootstrap support for H3GS72 as seed ortholog is 100%.

Group of orthologs #669. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 P.ramorum:287

A8JBD9              	100.00%		H3G546              	100.00%
Bootstrap support for A8JBD9 as seed ortholog is 100%.
Bootstrap support for H3G546 as seed ortholog is 100%.

Group of orthologs #670. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:134

A8JHL1              	100.00%		H3G4Y1              	100.00%
Bootstrap support for A8JHL1 as seed ortholog is 99%.
Bootstrap support for H3G4Y1 as seed ortholog is 99%.

Group of orthologs #671. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 P.ramorum:287

A8JGS3              	100.00%		H3G8C1              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for H3G8C1 as seed ortholog is 100%.

Group of orthologs #672. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 P.ramorum:286

A8IN95              	100.00%		H3G8I4              	100.00%
Bootstrap support for A8IN95 as seed ortholog is 100%.
Bootstrap support for H3G8I4 as seed ortholog is 100%.

Group of orthologs #673. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 P.ramorum:187

A8I9R7              	100.00%		H3HCI0              	100.00%
Bootstrap support for A8I9R7 as seed ortholog is 100%.
Bootstrap support for H3HCI0 as seed ortholog is 99%.

Group of orthologs #674. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:196

A8HXA6              	100.00%		H3GA84              	100.00%
                    	       		H3GA09              	28.23%
Bootstrap support for A8HXA6 as seed ortholog is 99%.
Bootstrap support for H3GA84 as seed ortholog is 100%.

Group of orthologs #675. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:285

A8I7N8              	100.00%		H3G9I6              	100.00%
Bootstrap support for A8I7N8 as seed ortholog is 99%.
Bootstrap support for H3G9I6 as seed ortholog is 100%.

Group of orthologs #676. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:20

A8J1B4              	100.00%		H3G588              	100.00%
Bootstrap support for A8J1B4 as seed ortholog is 99%.
Bootstrap support for H3G588 as seed ortholog is 70%.
Alternative seed ortholog is H3G6I5 (20 bits away from this cluster)

Group of orthologs #677. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.ramorum:285

A8JCM5              	100.00%		H3GPL3              	100.00%
Bootstrap support for A8JCM5 as seed ortholog is 100%.
Bootstrap support for H3GPL3 as seed ortholog is 100%.

Group of orthologs #678. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.ramorum:285

A8IIJ6              	100.00%		H3HCN8              	100.00%
Bootstrap support for A8IIJ6 as seed ortholog is 100%.
Bootstrap support for H3HCN8 as seed ortholog is 100%.

Group of orthologs #679. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 P.ramorum:284

A8J7I3              	100.00%		H3GB12              	100.00%
                    	       		H3G596              	84.38%
Bootstrap support for A8J7I3 as seed ortholog is 100%.
Bootstrap support for H3GB12 as seed ortholog is 100%.

Group of orthologs #680. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 P.ramorum:33

A8I465              	100.00%		H3G9E5              	100.00%
Bootstrap support for A8I465 as seed ortholog is 100%.
Bootstrap support for H3G9E5 as seed ortholog is 83%.

Group of orthologs #681. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 P.ramorum:284

A8ISG1              	100.00%		H3HBC2              	100.00%
Bootstrap support for A8ISG1 as seed ortholog is 100%.
Bootstrap support for H3HBC2 as seed ortholog is 100%.

Group of orthologs #682. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.ramorum:221

A8HXQ8              	100.00%		H3G7B8              	100.00%
Bootstrap support for A8HXQ8 as seed ortholog is 99%.
Bootstrap support for H3G7B8 as seed ortholog is 99%.

Group of orthologs #683. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:117

A8HYZ5              	100.00%		H3H8J2              	100.00%
Bootstrap support for A8HYZ5 as seed ortholog is 99%.
Bootstrap support for H3H8J2 as seed ortholog is 99%.

Group of orthologs #684. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 P.ramorum:283

A8IDY0              	100.00%		H3H4A6              	100.00%
Bootstrap support for A8IDY0 as seed ortholog is 100%.
Bootstrap support for H3H4A6 as seed ortholog is 100%.

Group of orthologs #685. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 P.ramorum:282

A8ICF1              	100.00%		H3GFB2              	100.00%
                    	       		H3G779              	53.94%
Bootstrap support for A8ICF1 as seed ortholog is 100%.
Bootstrap support for H3GFB2 as seed ortholog is 100%.

Group of orthologs #686. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:23

A8IYY0              	100.00%		H3G4Z5              	100.00%
Bootstrap support for A8IYY0 as seed ortholog is 97%.
Bootstrap support for H3G4Z5 as seed ortholog is 70%.
Alternative seed ortholog is H3GMC7 (23 bits away from this cluster)

Group of orthologs #687. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.ramorum:282

A8J0W9              	100.00%		H3G9V6              	100.00%
Bootstrap support for A8J0W9 as seed ortholog is 83%.
Bootstrap support for H3G9V6 as seed ortholog is 100%.

Group of orthologs #688. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 P.ramorum:282

A8IQV5              	100.00%		H3GMF5              	100.00%
Bootstrap support for A8IQV5 as seed ortholog is 100%.
Bootstrap support for H3GMF5 as seed ortholog is 100%.

Group of orthologs #689. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 P.ramorum:282

A8IYL4              	100.00%		H3GHV2              	100.00%
Bootstrap support for A8IYL4 as seed ortholog is 100%.
Bootstrap support for H3GHV2 as seed ortholog is 100%.

Group of orthologs #690. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:55

A8J7E4              	100.00%		H3HBW3              	100.00%
Bootstrap support for A8J7E4 as seed ortholog is 96%.
Bootstrap support for H3HBW3 as seed ortholog is 88%.

Group of orthologs #691. Best score 281 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.ramorum:281

A8J5Z0              	100.00%		H3G993              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 100%.
Bootstrap support for H3G993 as seed ortholog is 100%.

Group of orthologs #692. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.ramorum:152

A8JGQ3              	100.00%		H3GBL8              	100.00%
                    	       		H3GPE7              	31.32%
Bootstrap support for A8JGQ3 as seed ortholog is 100%.
Bootstrap support for H3GBL8 as seed ortholog is 99%.

Group of orthologs #693. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.ramorum:226

A8I9S6              	100.00%		H3GAE9              	100.00%
Bootstrap support for A8I9S6 as seed ortholog is 99%.
Bootstrap support for H3GAE9 as seed ortholog is 100%.

Group of orthologs #694. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.ramorum:152

A8J1B6              	100.00%		H3G8S2              	100.00%
Bootstrap support for A8J1B6 as seed ortholog is 99%.
Bootstrap support for H3G8S2 as seed ortholog is 99%.

Group of orthologs #695. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.ramorum:231

A8J8C1              	100.00%		H3G7C8              	100.00%
Bootstrap support for A8J8C1 as seed ortholog is 100%.
Bootstrap support for H3G7C8 as seed ortholog is 100%.

Group of orthologs #696. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:4

A8JH65              	100.00%		H3GAT2              	100.00%
Bootstrap support for A8JH65 as seed ortholog is 91%.
Bootstrap support for H3GAT2 as seed ortholog is 55%.
Alternative seed ortholog is H3G8R8 (4 bits away from this cluster)

Group of orthologs #697. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.ramorum:191

A8JFH6              	100.00%		H3HBK4              	100.00%
Bootstrap support for A8JFH6 as seed ortholog is 100%.
Bootstrap support for H3HBK4 as seed ortholog is 100%.

Group of orthologs #698. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.ramorum:11

A8HXK7              	100.00%		H3G8N2              	100.00%
Bootstrap support for A8HXK7 as seed ortholog is 100%.
Bootstrap support for H3G8N2 as seed ortholog is 61%.
Alternative seed ortholog is H3GI43 (11 bits away from this cluster)

Group of orthologs #699. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 P.ramorum:132

A8I4C2              	100.00%		H3GYB6              	100.00%
Bootstrap support for A8I4C2 as seed ortholog is 100%.
Bootstrap support for H3GYB6 as seed ortholog is 99%.

Group of orthologs #700. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.ramorum:170

A8JF17              	100.00%		H3G8I0              	100.00%
                    	       		H3G9R0              	98.85%
Bootstrap support for A8JF17 as seed ortholog is 99%.
Bootstrap support for H3G8I0 as seed ortholog is 100%.

Group of orthologs #701. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.ramorum:44

A8J282              	100.00%		H3GAB0              	100.00%
Bootstrap support for A8J282 as seed ortholog is 99%.
Bootstrap support for H3GAB0 as seed ortholog is 97%.

Group of orthologs #702. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 P.ramorum:129

A8JF70              	100.00%		H3H449              	100.00%
Bootstrap support for A8JF70 as seed ortholog is 100%.
Bootstrap support for H3H449 as seed ortholog is 99%.

Group of orthologs #703. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:126

A8J200              	100.00%		H3G6B9              	100.00%
                    	       		H3G766              	99.42%
Bootstrap support for A8J200 as seed ortholog is 99%.
Bootstrap support for H3G6B9 as seed ortholog is 99%.

Group of orthologs #704. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 P.ramorum:277

A8IZE7              	100.00%		H3GD17              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for H3GD17 as seed ortholog is 100%.

Group of orthologs #705. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 P.ramorum:277

A8JAT8              	100.00%		H3G5Q1              	100.00%
Bootstrap support for A8JAT8 as seed ortholog is 100%.
Bootstrap support for H3G5Q1 as seed ortholog is 100%.

Group of orthologs #706. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 P.ramorum:153

A8I6U1              	100.00%		H3HBG1              	100.00%
Bootstrap support for A8I6U1 as seed ortholog is 100%.
Bootstrap support for H3HBG1 as seed ortholog is 99%.

Group of orthologs #707. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.ramorum:276

A8HYG6              	100.00%		H3G7S5              	100.00%
                    	       		H3G6L1              	95.05%
Bootstrap support for A8HYG6 as seed ortholog is 100%.
Bootstrap support for H3G7S5 as seed ortholog is 100%.

Group of orthologs #708. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.ramorum:276

A8IWM5              	100.00%		H3GV05              	100.00%
Bootstrap support for A8IWM5 as seed ortholog is 100%.
Bootstrap support for H3GV05 as seed ortholog is 100%.

Group of orthologs #709. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.ramorum:275

A8JAP1              	100.00%		H3H5H8              	100.00%
                    	       		H3GYZ4              	93.38%
                    	       		H3GYZ7              	86.81%
                    	       		H3GZ00              	77.81%
Bootstrap support for A8JAP1 as seed ortholog is 100%.
Bootstrap support for H3H5H8 as seed ortholog is 100%.

Group of orthologs #710. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.ramorum:218

A8IL60              	100.00%		H3H0M5              	100.00%
Bootstrap support for A8IL60 as seed ortholog is 100%.
Bootstrap support for H3H0M5 as seed ortholog is 100%.

Group of orthologs #711. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:42

A8I2V3              	100.00%		H3G9V0              	100.00%
                    	       		H3G9V4              	16.56%
                    	       		H3GB90              	15.23%
                    	       		H3G9V3              	14.57%
                    	       		H3G661              	7.28%
Bootstrap support for A8I2V3 as seed ortholog is 96%.
Bootstrap support for H3G9V0 as seed ortholog is 95%.

Group of orthologs #712. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.ramorum:150

A8JGJ0              	100.00%		H3H453              	100.00%
A8J8M1              	14.42%		H3GME1              	96.52%
Bootstrap support for A8JGJ0 as seed ortholog is 100%.
Bootstrap support for H3H453 as seed ortholog is 99%.

Group of orthologs #713. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.ramorum:49

A8JAE8              	100.00%		H3GKU6              	100.00%
A8J9E5              	37.84%		
Bootstrap support for A8JAE8 as seed ortholog is 100%.
Bootstrap support for H3GKU6 as seed ortholog is 85%.

Group of orthologs #714. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.ramorum:109

A8I1T0              	100.00%		H3G513              	100.00%
Bootstrap support for A8I1T0 as seed ortholog is 100%.
Bootstrap support for H3G513 as seed ortholog is 99%.

Group of orthologs #715. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.ramorum:274

A8IZK3              	100.00%		H3G927              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for H3G927 as seed ortholog is 100%.

Group of orthologs #716. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.ramorum:172

A8JC30              	100.00%		H3G8B2              	100.00%
Bootstrap support for A8JC30 as seed ortholog is 100%.
Bootstrap support for H3G8B2 as seed ortholog is 100%.

Group of orthologs #717. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.ramorum:71

A8HPM0              	100.00%		H3HEG2              	100.00%
Bootstrap support for A8HPM0 as seed ortholog is 100%.
Bootstrap support for H3HEG2 as seed ortholog is 98%.

Group of orthologs #718. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:54

A8J2Y5              	100.00%		H3GT84              	100.00%
Bootstrap support for A8J2Y5 as seed ortholog is 99%.
Bootstrap support for H3GT84 as seed ortholog is 95%.

Group of orthologs #719. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.ramorum:274

A8J6H8              	100.00%		H3GSS3              	100.00%
Bootstrap support for A8J6H8 as seed ortholog is 100%.
Bootstrap support for H3GSS3 as seed ortholog is 100%.

Group of orthologs #720. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 P.ramorum:273

A8IVE2              	100.00%		H3GL87              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for H3GL87 as seed ortholog is 100%.

Group of orthologs #721. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.ramorum:76

A8J7T7              	100.00%		H3GMW6              	100.00%
A8I5R9              	8.07%		
Bootstrap support for A8J7T7 as seed ortholog is 100%.
Bootstrap support for H3GMW6 as seed ortholog is 96%.

Group of orthologs #722. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.ramorum:272

A8HYQ9              	100.00%		H3G5Y3              	100.00%
Bootstrap support for A8HYQ9 as seed ortholog is 100%.
Bootstrap support for H3G5Y3 as seed ortholog is 100%.

Group of orthologs #723. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:272

A8J9Q3              	100.00%		H3G642              	100.00%
Bootstrap support for A8J9Q3 as seed ortholog is 100%.
Bootstrap support for H3G642 as seed ortholog is 100%.

Group of orthologs #724. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.ramorum:197

A8J6P3              	100.00%		H3GBF8              	100.00%
Bootstrap support for A8J6P3 as seed ortholog is 100%.
Bootstrap support for H3GBF8 as seed ortholog is 99%.

Group of orthologs #725. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:271 P.ramorum:271

Q8RUE9              	100.00%		H3G9J8              	100.00%
Q94CJ2              	57.52%		
Bootstrap support for Q8RUE9 as seed ortholog is 100%.
Bootstrap support for H3G9J8 as seed ortholog is 100%.

Group of orthologs #726. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:175

A8JGT0              	100.00%		H3GF02              	100.00%
                    	       		H3GF01              	30.87%
Bootstrap support for A8JGT0 as seed ortholog is 92%.
Bootstrap support for H3GF02 as seed ortholog is 98%.

Group of orthologs #727. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.ramorum:271

A8IEH6              	100.00%		H3G508              	100.00%
Bootstrap support for A8IEH6 as seed ortholog is 78%.
Bootstrap support for H3G508 as seed ortholog is 100%.

Group of orthologs #728. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:271 P.ramorum:271

A8I2G3              	100.00%		H3GSJ6              	100.00%
Bootstrap support for A8I2G3 as seed ortholog is 100%.
Bootstrap support for H3GSJ6 as seed ortholog is 100%.

Group of orthologs #729. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.ramorum:271

A8J6N3              	100.00%		H3G751              	100.00%
Bootstrap support for A8J6N3 as seed ortholog is 99%.
Bootstrap support for H3G751 as seed ortholog is 100%.

Group of orthologs #730. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:271 P.ramorum:271

A8JAP4              	100.00%		H3GJT5              	100.00%
Bootstrap support for A8JAP4 as seed ortholog is 100%.
Bootstrap support for H3GJT5 as seed ortholog is 100%.

Group of orthologs #731. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.ramorum:146

A8JCH8              	100.00%		H3G775              	100.00%
                    	       		H3G697              	22.84%
                    	       		H3G698              	22.53%
Bootstrap support for A8JCH8 as seed ortholog is 100%.
Bootstrap support for H3G775 as seed ortholog is 82%.

Group of orthologs #732. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.ramorum:270

A8J629              	100.00%		H3GA20              	100.00%
A8J4L6              	33.97%		
Bootstrap support for A8J629 as seed ortholog is 100%.
Bootstrap support for H3GA20 as seed ortholog is 100%.

Group of orthologs #733. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.ramorum:214

A8J3T9              	100.00%		H3G5E0              	100.00%
Bootstrap support for A8J3T9 as seed ortholog is 100%.
Bootstrap support for H3G5E0 as seed ortholog is 100%.

Group of orthologs #734. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:270

A8JAX1              	100.00%		H3G7G0              	100.00%
Bootstrap support for A8JAX1 as seed ortholog is 100%.
Bootstrap support for H3G7G0 as seed ortholog is 100%.

Group of orthologs #735. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.ramorum:270

A8JC18              	100.00%		H3G8C5              	100.00%
Bootstrap support for A8JC18 as seed ortholog is 100%.
Bootstrap support for H3G8C5 as seed ortholog is 100%.

Group of orthologs #736. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.ramorum:122

A8J2W1              	100.00%		H3GT37              	100.00%
Bootstrap support for A8J2W1 as seed ortholog is 100%.
Bootstrap support for H3GT37 as seed ortholog is 99%.

Group of orthologs #737. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:158

A8HPX8              	100.00%		H3GG09              	100.00%
Bootstrap support for A8HPX8 as seed ortholog is 95%.
Bootstrap support for H3GG09 as seed ortholog is 99%.

Group of orthologs #738. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.ramorum:144

A8JFD5              	100.00%		H3G745              	100.00%
Bootstrap support for A8JFD5 as seed ortholog is 100%.
Bootstrap support for H3G745 as seed ortholog is 99%.

Group of orthologs #739. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.ramorum:269

A8JGF8              	100.00%		H3G8V6              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 100%.
Bootstrap support for H3G8V6 as seed ortholog is 100%.

Group of orthologs #740. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.ramorum:227

A8IT87              	100.00%		H3GUK7              	100.00%
Bootstrap support for A8IT87 as seed ortholog is 100%.
Bootstrap support for H3GUK7 as seed ortholog is 100%.

Group of orthologs #741. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.ramorum:160

A8J8S6              	100.00%		H3GS79              	100.00%
Bootstrap support for A8J8S6 as seed ortholog is 99%.
Bootstrap support for H3GS79 as seed ortholog is 100%.

Group of orthologs #742. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 P.ramorum:268

A8JH28              	100.00%		A1XDC2              	100.00%
Bootstrap support for A8JH28 as seed ortholog is 100%.
Bootstrap support for A1XDC2 as seed ortholog is 100%.

Group of orthologs #743. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 P.ramorum:268

A8J7H0              	100.00%		H3GPP2              	100.00%
Bootstrap support for A8J7H0 as seed ortholog is 100%.
Bootstrap support for H3GPP2 as seed ortholog is 100%.

Group of orthologs #744. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:267

A8J2R7              	100.00%		H3GYM7              	100.00%
                    	       		H3H0I8              	52.31%
Bootstrap support for A8J2R7 as seed ortholog is 99%.
Bootstrap support for H3GYM7 as seed ortholog is 100%.

Group of orthologs #745. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8HTN0              	100.00%		H3G9W4              	100.00%
Bootstrap support for A8HTN0 as seed ortholog is 90%.
Bootstrap support for H3G9W4 as seed ortholog is 92%.

Group of orthologs #746. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.ramorum:267

A8I2D8              	100.00%		H3GBV9              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for H3GBV9 as seed ortholog is 100%.

Group of orthologs #747. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:131

A8IDP6              	100.00%		H3G9K1              	100.00%
Bootstrap support for A8IDP6 as seed ortholog is 100%.
Bootstrap support for H3G9K1 as seed ortholog is 100%.

Group of orthologs #748. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.ramorum:3

A8IPE0              	100.00%		H3G757              	100.00%
Bootstrap support for A8IPE0 as seed ortholog is 100%.
Bootstrap support for H3G757 as seed ortholog is 55%.
Alternative seed ortholog is H3G9H8 (3 bits away from this cluster)

Group of orthologs #749. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.ramorum:267

A8IAX2              	100.00%		H3GHC6              	100.00%
Bootstrap support for A8IAX2 as seed ortholog is 100%.
Bootstrap support for H3GHC6 as seed ortholog is 100%.

Group of orthologs #750. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:267

A8ICB3              	100.00%		H3GNU1              	100.00%
Bootstrap support for A8ICB3 as seed ortholog is 100%.
Bootstrap support for H3GNU1 as seed ortholog is 100%.

Group of orthologs #751. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.ramorum:267

A8J2Q6              	100.00%		H3HD56              	100.00%
Bootstrap support for A8J2Q6 as seed ortholog is 100%.
Bootstrap support for H3HD56 as seed ortholog is 100%.

Group of orthologs #752. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.ramorum:266

A8JIV0              	100.00%		H3G597              	100.00%
                    	       		H3HE95              	82.84%
Bootstrap support for A8JIV0 as seed ortholog is 100%.
Bootstrap support for H3G597 as seed ortholog is 100%.

Group of orthologs #753. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.ramorum:266

A8IMY5              	100.00%		H3G8E8              	100.00%
Bootstrap support for A8IMY5 as seed ortholog is 100%.
Bootstrap support for H3G8E8 as seed ortholog is 100%.

Group of orthologs #754. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.ramorum:68

A8JFA4              	100.00%		H3G6B6              	100.00%
Bootstrap support for A8JFA4 as seed ortholog is 100%.
Bootstrap support for H3G6B6 as seed ortholog is 95%.

Group of orthologs #755. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:190

A8IL73              	100.00%		H3GXG4              	100.00%
Bootstrap support for A8IL73 as seed ortholog is 99%.
Bootstrap support for H3GXG4 as seed ortholog is 99%.

Group of orthologs #756. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.ramorum:266

A8J6I6              	100.00%		H3GIY8              	100.00%
Bootstrap support for A8J6I6 as seed ortholog is 100%.
Bootstrap support for H3GIY8 as seed ortholog is 100%.

Group of orthologs #757. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 P.ramorum:77

A8JIJ6              	100.00%		H3H1K1              	100.00%
A8IEJ9              	25.21%		H3H1K3              	42.39%
A8HSS9              	13.12%		
A8J0V3              	6.81%		
Bootstrap support for A8JIJ6 as seed ortholog is 96%.
Bootstrap support for H3H1K1 as seed ortholog is 95%.

Group of orthologs #758. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.ramorum:264

A8ICL2              	100.00%		H3GC77              	100.00%
                    	       		H3GT98              	11.62%
Bootstrap support for A8ICL2 as seed ortholog is 100%.
Bootstrap support for H3GC77 as seed ortholog is 100%.

Group of orthologs #759. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.ramorum:264

A8HVQ1              	100.00%		H3G699              	100.00%
Bootstrap support for A8HVQ1 as seed ortholog is 100%.
Bootstrap support for H3G699 as seed ortholog is 100%.

Group of orthologs #760. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.ramorum:264

A8HZC5              	100.00%		H3GC14              	100.00%
Bootstrap support for A8HZC5 as seed ortholog is 100%.
Bootstrap support for H3GC14 as seed ortholog is 100%.

Group of orthologs #761. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.ramorum:115

A8HN42              	100.00%		H3HDG0              	100.00%
Bootstrap support for A8HN42 as seed ortholog is 100%.
Bootstrap support for H3HDG0 as seed ortholog is 100%.

Group of orthologs #762. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:211

A8HM29              	100.00%		H3HBB8              	100.00%
A8IVK4              	30.42%		
Bootstrap support for A8HM29 as seed ortholog is 100%.
Bootstrap support for H3HBB8 as seed ortholog is 100%.

Group of orthologs #763. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.ramorum:263

A8HUT2              	100.00%		H3GJE3              	100.00%
Bootstrap support for A8HUT2 as seed ortholog is 100%.
Bootstrap support for H3GJE3 as seed ortholog is 100%.

Group of orthologs #764. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.ramorum:263

A8J1G8              	100.00%		H3G4X4              	100.00%
Bootstrap support for A8J1G8 as seed ortholog is 100%.
Bootstrap support for H3G4X4 as seed ortholog is 100%.

Group of orthologs #765. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.ramorum:263

A8JEL2              	100.00%		H3G9Z9              	100.00%
Bootstrap support for A8JEL2 as seed ortholog is 99%.
Bootstrap support for H3G9Z9 as seed ortholog is 100%.

Group of orthologs #766. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.ramorum:126

A8ILX2              	100.00%		H3G9D1              	100.00%
Bootstrap support for A8ILX2 as seed ortholog is 100%.
Bootstrap support for H3G9D1 as seed ortholog is 99%.

Group of orthologs #767. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.ramorum:262

A8IBC1              	100.00%		H3GKA6              	100.00%
Bootstrap support for A8IBC1 as seed ortholog is 100%.
Bootstrap support for H3GKA6 as seed ortholog is 100%.

Group of orthologs #768. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.ramorum:91

A8I2Z6              	100.00%		H3GPD4              	100.00%
Bootstrap support for A8I2Z6 as seed ortholog is 100%.
Bootstrap support for H3GPD4 as seed ortholog is 99%.

Group of orthologs #769. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:262

A8JII8              	100.00%		H3GCB9              	100.00%
Bootstrap support for A8JII8 as seed ortholog is 94%.
Bootstrap support for H3GCB9 as seed ortholog is 100%.

Group of orthologs #770. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.ramorum:262

A8HT69              	100.00%		H3HDH6              	100.00%
Bootstrap support for A8HT69 as seed ortholog is 100%.
Bootstrap support for H3HDH6 as seed ortholog is 100%.

Group of orthologs #771. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.ramorum:262

A8J8U1              	100.00%		H3GZU7              	100.00%
Bootstrap support for A8J8U1 as seed ortholog is 100%.
Bootstrap support for H3GZU7 as seed ortholog is 100%.

Group of orthologs #772. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.ramorum:261

A8I4E1              	100.00%		H3GEM8              	100.00%
Bootstrap support for A8I4E1 as seed ortholog is 100%.
Bootstrap support for H3GEM8 as seed ortholog is 100%.

Group of orthologs #773. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.ramorum:261

A8IRL9              	100.00%		H3HCZ5              	100.00%
Bootstrap support for A8IRL9 as seed ortholog is 100%.
Bootstrap support for H3HCZ5 as seed ortholog is 100%.

Group of orthologs #774. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:261

A8J0U5              	100.00%		H3HDJ2              	100.00%
Bootstrap support for A8J0U5 as seed ortholog is 99%.
Bootstrap support for H3HDJ2 as seed ortholog is 100%.

Group of orthologs #775. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.ramorum:260

Q5S7Y5              	100.00%		H3G9A8              	100.00%
                    	       		H3G8F9              	51.72%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for H3G9A8 as seed ortholog is 100%.

Group of orthologs #776. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:21

A8I6J1              	100.00%		H3G5J1              	100.00%
Bootstrap support for A8I6J1 as seed ortholog is 99%.
Bootstrap support for H3G5J1 as seed ortholog is 75%.

Group of orthologs #777. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.ramorum:59

A8IZ93              	100.00%		H3GAR4              	100.00%
Bootstrap support for A8IZ93 as seed ortholog is 100%.
Bootstrap support for H3GAR4 as seed ortholog is 95%.

Group of orthologs #778. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.ramorum:141

A8JFE5              	100.00%		H3G8N8              	100.00%
Bootstrap support for A8JFE5 as seed ortholog is 99%.
Bootstrap support for H3G8N8 as seed ortholog is 100%.

Group of orthologs #779. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.ramorum:260

A8HP64              	100.00%		H3H834              	100.00%
Bootstrap support for A8HP64 as seed ortholog is 100%.
Bootstrap support for H3H834 as seed ortholog is 100%.

Group of orthologs #780. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.ramorum:260

A8IT69              	100.00%		H3H144              	100.00%
Bootstrap support for A8IT69 as seed ortholog is 100%.
Bootstrap support for H3H144 as seed ortholog is 100%.

Group of orthologs #781. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:1

A8JB50              	100.00%		H3G5D8              	100.00%
                    	       		H3GAD6              	32.13%
                    	       		H3HC38              	31.86%
                    	       		H3HDS7              	28.81%
Bootstrap support for A8JB50 as seed ortholog is 84%.
Bootstrap support for H3G5D8 as seed ortholog is 51%.
Alternative seed ortholog is H3G992 (1 bits away from this cluster)

Group of orthologs #782. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:80

A8IUL5              	100.00%		H3GNL8              	100.00%
                    	       		H3GN52              	8.52%
Bootstrap support for A8IUL5 as seed ortholog is 96%.
Bootstrap support for H3GNL8 as seed ortholog is 91%.

Group of orthologs #783. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.ramorum:259

A8J2N5              	100.00%		H3G934              	100.00%
Bootstrap support for A8J2N5 as seed ortholog is 100%.
Bootstrap support for H3G934 as seed ortholog is 100%.

Group of orthologs #784. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:127

A8J876              	100.00%		H3G669              	100.00%
Bootstrap support for A8J876 as seed ortholog is 85%.
Bootstrap support for H3G669 as seed ortholog is 99%.

Group of orthologs #785. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 P.ramorum:259

A8J1S7              	100.00%		H3GKJ7              	100.00%
Bootstrap support for A8J1S7 as seed ortholog is 100%.
Bootstrap support for H3GKJ7 as seed ortholog is 100%.

Group of orthologs #786. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:63

A8JI66              	100.00%		H3G5R6              	100.00%
Bootstrap support for A8JI66 as seed ortholog is 85%.
Bootstrap support for H3G5R6 as seed ortholog is 90%.

Group of orthologs #787. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:172

A8JFI8              	100.00%		H3G8P2              	100.00%
Bootstrap support for A8JFI8 as seed ortholog is 99%.
Bootstrap support for H3G8P2 as seed ortholog is 100%.

Group of orthologs #788. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 P.ramorum:259

A8JA68              	100.00%		H3GUH8              	100.00%
Bootstrap support for A8JA68 as seed ortholog is 100%.
Bootstrap support for H3GUH8 as seed ortholog is 100%.

Group of orthologs #789. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.ramorum:46

A8JIT5              	100.00%		H3HC76              	100.00%
Bootstrap support for A8JIT5 as seed ortholog is 88%.
Bootstrap support for H3HC76 as seed ortholog is 98%.

Group of orthologs #790. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.ramorum:258

A8ISQ2              	100.00%		H3G8K0              	100.00%
Bootstrap support for A8ISQ2 as seed ortholog is 100%.
Bootstrap support for H3G8K0 as seed ortholog is 100%.

Group of orthologs #791. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.ramorum:258

A8J409              	100.00%		H3G763              	100.00%
Bootstrap support for A8J409 as seed ortholog is 100%.
Bootstrap support for H3G763 as seed ortholog is 100%.

Group of orthologs #792. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:191

A8J3R3              	100.00%		H3G876              	100.00%
                    	       		H3GZ94              	16.08%
                    	       		H3GAB3              	15.38%
                    	       		H3GZ74              	12.35%
                    	       		H3G8T2              	11.89%
                    	       		H3GZ96              	5.59%
Bootstrap support for A8J3R3 as seed ortholog is 99%.
Bootstrap support for H3G876 as seed ortholog is 100%.

Group of orthologs #793. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.ramorum:257

A8I780              	100.00%		H3G794              	100.00%
Q8LKG7              	100.00%		H3GQQ0              	100.00%
                    	       		H3G7I7              	56.15%
Bootstrap support for A8I780 as seed ortholog is 100%.
Bootstrap support for Q8LKG7 as seed ortholog is 100%.
Bootstrap support for H3G794 as seed ortholog is 100%.
Bootstrap support for H3GQQ0 as seed ortholog is 100%.

Group of orthologs #794. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:171

A8HNG4              	100.00%		H3G9W3              	100.00%
Bootstrap support for A8HNG4 as seed ortholog is 100%.
Bootstrap support for H3G9W3 as seed ortholog is 100%.

Group of orthologs #795. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.ramorum:257

A8IA18              	100.00%		H3G5G6              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for H3G5G6 as seed ortholog is 100%.

Group of orthologs #796. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:257

A8IXD1              	100.00%		H3GAI3              	100.00%
Bootstrap support for A8IXD1 as seed ortholog is 99%.
Bootstrap support for H3GAI3 as seed ortholog is 100%.

Group of orthologs #797. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.ramorum:183

A8ITB4              	100.00%		H3GFF2              	100.00%
Bootstrap support for A8ITB4 as seed ortholog is 99%.
Bootstrap support for H3GFF2 as seed ortholog is 100%.

Group of orthologs #798. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:257

A8IZE1              	100.00%		H3GLR2              	100.00%
Bootstrap support for A8IZE1 as seed ortholog is 99%.
Bootstrap support for H3GLR2 as seed ortholog is 100%.

Group of orthologs #799. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:257

A8JCS3              	100.00%		H3GC81              	100.00%
Bootstrap support for A8JCS3 as seed ortholog is 100%.
Bootstrap support for H3GC81 as seed ortholog is 100%.

Group of orthologs #800. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.ramorum:257

A8IL38              	100.00%		H3HCX5              	100.00%
Bootstrap support for A8IL38 as seed ortholog is 100%.
Bootstrap support for H3HCX5 as seed ortholog is 100%.

Group of orthologs #801. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.ramorum:257

A8JBN4              	100.00%		H3GYB8              	100.00%
Bootstrap support for A8JBN4 as seed ortholog is 100%.
Bootstrap support for H3GYB8 as seed ortholog is 100%.

Group of orthologs #802. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:120

A8IX35              	100.00%		H3G998              	100.00%
A8IX47              	100.00%		H3H7K9              	100.00%
                    	       		H3G9A0              	98.90%
                    	       		H3GAZ4              	65.02%
                    	       		H3H7L0              	65.02%
                    	       		H3GCY4              	61.45%
                    	       		H3GAV7              	60.35%
                    	       		H3GAJ7              	55.95%
                    	       		H3GAR5              	53.74%
                    	       		H3GAR6              	53.52%
                    	       		H3GA14              	51.76%
                    	       		H3GMM7              	32.38%
                    	       		H3GMM9              	30.62%
                    	       		H3G6J3              	11.37%
Bootstrap support for A8IX35 as seed ortholog is 91%.
Bootstrap support for A8IX47 as seed ortholog is 79%.
Bootstrap support for H3G998 as seed ortholog is 99%.
Bootstrap support for H3H7K9 as seed ortholog is 99%.

Group of orthologs #803. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.ramorum:256

A8J768              	100.00%		H3G7S0              	100.00%
Bootstrap support for A8J768 as seed ortholog is 100%.
Bootstrap support for H3G7S0 as seed ortholog is 100%.

Group of orthologs #804. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.ramorum:164

A8IR43              	100.00%		H3GU14              	100.00%
Bootstrap support for A8IR43 as seed ortholog is 99%.
Bootstrap support for H3GU14 as seed ortholog is 100%.

Group of orthologs #805. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.ramorum:255

A8I665              	100.00%		H3G8D5              	100.00%
Bootstrap support for A8I665 as seed ortholog is 100%.
Bootstrap support for H3G8D5 as seed ortholog is 100%.

Group of orthologs #806. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.ramorum:180

A8HMZ4              	100.00%		H3GJR7              	100.00%
Bootstrap support for A8HMZ4 as seed ortholog is 100%.
Bootstrap support for H3GJR7 as seed ortholog is 100%.

Group of orthologs #807. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.ramorum:111

A8IR47              	100.00%		H3G895              	100.00%
Bootstrap support for A8IR47 as seed ortholog is 100%.
Bootstrap support for H3G895 as seed ortholog is 99%.

Group of orthologs #808. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.ramorum:255

A8J2F9              	100.00%		H3G8B5              	100.00%
Bootstrap support for A8J2F9 as seed ortholog is 56%.
Alternative seed ortholog is A8J3C4 (3 bits away from this cluster)
Bootstrap support for H3G8B5 as seed ortholog is 100%.

Group of orthologs #809. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.ramorum:255

A8IVX5              	100.00%		H3GSU4              	100.00%
Bootstrap support for A8IVX5 as seed ortholog is 100%.
Bootstrap support for H3GSU4 as seed ortholog is 100%.

Group of orthologs #810. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:179

A8JHL6              	100.00%		H3GA86              	100.00%
Bootstrap support for A8JHL6 as seed ortholog is 83%.
Bootstrap support for H3GA86 as seed ortholog is 99%.

Group of orthologs #811. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.ramorum:255

Q6V9B1              	100.00%		H3G8P0              	100.00%
Bootstrap support for Q6V9B1 as seed ortholog is 100%.
Bootstrap support for H3G8P0 as seed ortholog is 100%.

Group of orthologs #812. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.ramorum:255

A8J1S4              	100.00%		H3GZB7              	100.00%
Bootstrap support for A8J1S4 as seed ortholog is 100%.
Bootstrap support for H3GZB7 as seed ortholog is 100%.

Group of orthologs #813. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.ramorum:176

A8HPW6              	100.00%		H3GJB7              	100.00%
                    	       		H3H5C2              	18.25%
                    	       		H3GTW8              	12.88%
Bootstrap support for A8HPW6 as seed ortholog is 100%.
Bootstrap support for H3GJB7 as seed ortholog is 99%.

Group of orthologs #814. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.ramorum:254

A8HM76              	100.00%		H3G771              	100.00%
Bootstrap support for A8HM76 as seed ortholog is 100%.
Bootstrap support for H3G771 as seed ortholog is 100%.

Group of orthologs #815. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.ramorum:254

A8HP17              	100.00%		H3G9D2              	100.00%
Bootstrap support for A8HP17 as seed ortholog is 100%.
Bootstrap support for H3G9D2 as seed ortholog is 100%.

Group of orthologs #816. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.ramorum:254

A8I4T2              	100.00%		H3GAM0              	100.00%
Bootstrap support for A8I4T2 as seed ortholog is 100%.
Bootstrap support for H3GAM0 as seed ortholog is 100%.

Group of orthologs #817. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:254

A8IBU9              	100.00%		H3GY76              	100.00%
Bootstrap support for A8IBU9 as seed ortholog is 99%.
Bootstrap support for H3GY76 as seed ortholog is 100%.

Group of orthologs #818. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:254

A8JGY3              	100.00%		H3G9X0              	100.00%
Bootstrap support for A8JGY3 as seed ortholog is 100%.
Bootstrap support for H3G9X0 as seed ortholog is 100%.

Group of orthologs #819. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.ramorum:15

A8J1E8              	100.00%		H3GTD5              	100.00%
Bootstrap support for A8J1E8 as seed ortholog is 100%.
Bootstrap support for H3GTD5 as seed ortholog is 64%.
Alternative seed ortholog is H3GMG6 (15 bits away from this cluster)

Group of orthologs #820. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:126

A8JFP4              	100.00%		H3HB56              	100.00%
Bootstrap support for A8JFP4 as seed ortholog is 99%.
Bootstrap support for H3HB56 as seed ortholog is 99%.

Group of orthologs #821. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.ramorum:253

A8J5Q8              	100.00%		H3HC98              	100.00%
                    	       		H3H721              	68.48%
Bootstrap support for A8J5Q8 as seed ortholog is 100%.
Bootstrap support for H3HC98 as seed ortholog is 100%.

Group of orthologs #822. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.ramorum:253

A8HSZ0              	100.00%		H3G562              	100.00%
Bootstrap support for A8HSZ0 as seed ortholog is 100%.
Bootstrap support for H3G562 as seed ortholog is 100%.

Group of orthologs #823. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.ramorum:253

A8JBL6              	100.00%		H3GAE7              	100.00%
Bootstrap support for A8JBL6 as seed ortholog is 100%.
Bootstrap support for H3GAE7 as seed ortholog is 100%.

Group of orthologs #824. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:63

A8HSB7              	100.00%		H3H549              	100.00%
Bootstrap support for A8HSB7 as seed ortholog is 99%.
Bootstrap support for H3H549 as seed ortholog is 96%.

Group of orthologs #825. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.ramorum:253

A8JHH1              	100.00%		H3GAL6              	100.00%
Bootstrap support for A8JHH1 as seed ortholog is 100%.
Bootstrap support for H3GAL6 as seed ortholog is 100%.

Group of orthologs #826. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:252

A8HSA7              	100.00%		H3G880              	100.00%
A8J9M0              	91.67%		H3G9N3              	7.69%
A8IK09              	83.33%		
A8HWY2              	66.67%		
Bootstrap support for A8HSA7 as seed ortholog is 99%.
Bootstrap support for H3G880 as seed ortholog is 100%.

Group of orthologs #827. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:118

A8JCG2              	100.00%		H3G838              	100.00%
A8JD18              	9.82%		
Bootstrap support for A8JCG2 as seed ortholog is 99%.
Bootstrap support for H3G838 as seed ortholog is 99%.

Group of orthologs #828. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.ramorum:252

A8I2E0              	100.00%		H3G948              	100.00%
Bootstrap support for A8I2E0 as seed ortholog is 99%.
Bootstrap support for H3G948 as seed ortholog is 100%.

Group of orthologs #829. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.ramorum:252

A8HW07              	100.00%		H3GDU3              	100.00%
Bootstrap support for A8HW07 as seed ortholog is 100%.
Bootstrap support for H3GDU3 as seed ortholog is 100%.

Group of orthologs #830. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:252

A8ICA8              	100.00%		H3GXK1              	100.00%
Bootstrap support for A8ICA8 as seed ortholog is 100%.
Bootstrap support for H3GXK1 as seed ortholog is 100%.

Group of orthologs #831. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.ramorum:252

Q6V9B0              	100.00%		H3G793              	100.00%
Bootstrap support for Q6V9B0 as seed ortholog is 100%.
Bootstrap support for H3G793 as seed ortholog is 100%.

Group of orthologs #832. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.ramorum:252

A8IJL8              	100.00%		H3HDR9              	100.00%
Bootstrap support for A8IJL8 as seed ortholog is 100%.
Bootstrap support for H3HDR9 as seed ortholog is 100%.

Group of orthologs #833. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.ramorum:251

A8IAK9              	100.00%		H3G723              	100.00%
Bootstrap support for A8IAK9 as seed ortholog is 100%.
Bootstrap support for H3G723 as seed ortholog is 100%.

Group of orthologs #834. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.ramorum:251

A8I4N9              	100.00%		H3GPC6              	100.00%
Bootstrap support for A8I4N9 as seed ortholog is 100%.
Bootstrap support for H3GPC6 as seed ortholog is 100%.

Group of orthologs #835. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.ramorum:55

A8J6U8              	100.00%		H3G7R8              	100.00%
Bootstrap support for A8J6U8 as seed ortholog is 67%.
Alternative seed ortholog is A8I1H8 (15 bits away from this cluster)
Bootstrap support for H3G7R8 as seed ortholog is 95%.

Group of orthologs #836. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.ramorum:251

A8J9S8              	100.00%		H3G590              	100.00%
Bootstrap support for A8J9S8 as seed ortholog is 100%.
Bootstrap support for H3G590 as seed ortholog is 100%.

Group of orthologs #837. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.ramorum:251

A8JGE8              	100.00%		H3GHG9              	100.00%
Bootstrap support for A8JGE8 as seed ortholog is 100%.
Bootstrap support for H3GHG9 as seed ortholog is 100%.

Group of orthologs #838. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.ramorum:250

O65000              	100.00%		H3G635              	100.00%
Q9FE26              	28.12%		H3G636              	71.92%
                    	       		H3GKW0              	69.23%
                    	       		H3G638              	45.77%
Bootstrap support for O65000 as seed ortholog is 100%.
Bootstrap support for H3G635 as seed ortholog is 100%.

Group of orthologs #839. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:89

A8J487              	100.00%		H3G6P5              	100.00%
                    	       		H3G6P4              	55.53%
                    	       		H3G6B7              	7.28%
Bootstrap support for A8J487 as seed ortholog is 99%.
Bootstrap support for H3G6P5 as seed ortholog is 99%.

Group of orthologs #840. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.ramorum:250

A8IYG7              	100.00%		H3G8F2              	100.00%
Bootstrap support for A8IYG7 as seed ortholog is 100%.
Bootstrap support for H3G8F2 as seed ortholog is 100%.

Group of orthologs #841. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.ramorum:155

A8J3B0              	100.00%		H3G7W6              	100.00%
Bootstrap support for A8J3B0 as seed ortholog is 99%.
Bootstrap support for H3G7W6 as seed ortholog is 99%.

Group of orthologs #842. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:52

A8JC40              	100.00%		H3G5V3              	100.00%
Bootstrap support for A8JC40 as seed ortholog is 100%.
Bootstrap support for H3G5V3 as seed ortholog is 99%.

Group of orthologs #843. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:250

A8JIG3              	100.00%		H3GA29              	100.00%
Bootstrap support for A8JIG3 as seed ortholog is 100%.
Bootstrap support for H3GA29 as seed ortholog is 100%.

Group of orthologs #844. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:89

Q66YD3              	100.00%		H3G867              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 99%.
Bootstrap support for H3G867 as seed ortholog is 94%.

Group of orthologs #845. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.ramorum:250

A8J3M4              	100.00%		H3GT51              	100.00%
Bootstrap support for A8J3M4 as seed ortholog is 100%.
Bootstrap support for H3GT51 as seed ortholog is 100%.

Group of orthologs #846. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.ramorum:249

A8J567              	100.00%		H3G5N0              	100.00%
Bootstrap support for A8J567 as seed ortholog is 100%.
Bootstrap support for H3G5N0 as seed ortholog is 100%.

Group of orthologs #847. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:86

A8JGB3              	100.00%		H3H2V0              	100.00%
Bootstrap support for A8JGB3 as seed ortholog is 99%.
Bootstrap support for H3H2V0 as seed ortholog is 98%.

Group of orthologs #848. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:59

A8J4Y5              	100.00%		H3GG99              	100.00%
                    	       		H3GG98              	27.04%
Bootstrap support for A8J4Y5 as seed ortholog is 99%.
Bootstrap support for H3GG99 as seed ortholog is 89%.

Group of orthologs #849. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:248

A8I5H6              	100.00%		H3G7J2              	100.00%
Bootstrap support for A8I5H6 as seed ortholog is 99%.
Bootstrap support for H3G7J2 as seed ortholog is 100%.

Group of orthologs #850. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.ramorum:248

A8IYH8              	100.00%		H3GTZ8              	100.00%
Bootstrap support for A8IYH8 as seed ortholog is 100%.
Bootstrap support for H3GTZ8 as seed ortholog is 100%.

Group of orthologs #851. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.ramorum:247

A8I843              	100.00%		H3GC34              	100.00%
Bootstrap support for A8I843 as seed ortholog is 100%.
Bootstrap support for H3GC34 as seed ortholog is 100%.

Group of orthologs #852. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.ramorum:151

A8JCR0              	100.00%		H3G9C0              	100.00%
Bootstrap support for A8JCR0 as seed ortholog is 100%.
Bootstrap support for H3G9C0 as seed ortholog is 100%.

Group of orthologs #853. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:100

A8J6U6              	100.00%		H3GHQ3              	100.00%
Bootstrap support for A8J6U6 as seed ortholog is 99%.
Bootstrap support for H3GHQ3 as seed ortholog is 94%.

Group of orthologs #854. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 P.ramorum:246

A2T2X4              	100.00%		H3GY38              	100.00%
Bootstrap support for A2T2X4 as seed ortholog is 100%.
Bootstrap support for H3GY38 as seed ortholog is 100%.

Group of orthologs #855. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.ramorum:178

A8IZY8              	100.00%		H3GKC9              	100.00%
A8J4P3              	100.00%		H3G5V9              	100.00%
A8J4P5              	81.63%		H3GKC8              	54.31%
                    	       		H3GKC5              	53.67%
                    	       		H3G5W0              	51.60%
Bootstrap support for A8IZY8 as seed ortholog is 100%.
Bootstrap support for A8J4P3 as seed ortholog is 100%.
Bootstrap support for H3GKC9 as seed ortholog is 100%.
Bootstrap support for H3G5V9 as seed ortholog is 100%.

Group of orthologs #856. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 P.ramorum:183

A8J6J0              	100.00%		H3GR58              	100.00%
                    	       		H3GR59              	22.06%
                    	       		H3GP17              	21.74%
                    	       		H3GQF2              	21.41%
                    	       		H3H1Q0              	21.35%
                    	       		H3GR68              	19.21%
Bootstrap support for A8J6J0 as seed ortholog is 100%.
Bootstrap support for H3GR58 as seed ortholog is 100%.

Group of orthologs #857. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:110

A8ISN6              	100.00%		H3G9T0              	100.00%
Bootstrap support for A8ISN6 as seed ortholog is 99%.
Bootstrap support for H3G9T0 as seed ortholog is 99%.

Group of orthologs #858. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.ramorum:61

A8I3T3              	100.00%		H3G969              	100.00%
Bootstrap support for A8I3T3 as seed ortholog is 100%.
Bootstrap support for H3G969 as seed ortholog is 99%.

Group of orthologs #859. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.ramorum:244

A8I7C5              	100.00%		H3GR01              	100.00%
Bootstrap support for A8I7C5 as seed ortholog is 76%.
Bootstrap support for H3GR01 as seed ortholog is 100%.

Group of orthologs #860. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.ramorum:244

A8HVV2              	100.00%		H3GZX2              	100.00%
Bootstrap support for A8HVV2 as seed ortholog is 100%.
Bootstrap support for H3GZX2 as seed ortholog is 100%.

Group of orthologs #861. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.ramorum:244

A8J5P4              	100.00%		H3GDA2              	100.00%
Bootstrap support for A8J5P4 as seed ortholog is 100%.
Bootstrap support for H3GDA2 as seed ortholog is 100%.

Group of orthologs #862. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.ramorum:244

A8ITI8              	100.00%		H3GTK3              	100.00%
Bootstrap support for A8ITI8 as seed ortholog is 100%.
Bootstrap support for H3GTK3 as seed ortholog is 100%.

Group of orthologs #863. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.ramorum:48

Q19VH5              	100.00%		H3GA25              	100.00%
Q19VH4              	100.00%		H3GA24              	100.00%
A8I0H0              	35.98%		H3HDF4              	100.00%
                    	       		H3G7I8              	57.05%
                    	       		H3GW69              	51.92%
                    	       		H3GA56              	25.00%
                    	       		H3GA54              	14.10%
                    	       		H3GB09              	11.88%
Bootstrap support for Q19VH5 as seed ortholog is 100%.
Bootstrap support for Q19VH4 as seed ortholog is 100%.
Bootstrap support for H3GA25 as seed ortholog is 97%.
Bootstrap support for H3GA24 as seed ortholog is 97%.
Bootstrap support for H3HDF4 as seed ortholog is 97%.

Group of orthologs #864. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:137

A8HQ77              	100.00%		H3G9K8              	100.00%
Bootstrap support for A8HQ77 as seed ortholog is 99%.
Bootstrap support for H3G9K8 as seed ortholog is 100%.

Group of orthologs #865. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.ramorum:243

A8HPZ9              	100.00%		H3GLP4              	100.00%
Bootstrap support for A8HPZ9 as seed ortholog is 100%.
Bootstrap support for H3GLP4 as seed ortholog is 100%.

Group of orthologs #866. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.ramorum:243

A8IHT2              	100.00%		H3GP21              	100.00%
Bootstrap support for A8IHT2 as seed ortholog is 100%.
Bootstrap support for H3GP21 as seed ortholog is 100%.

Group of orthologs #867. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:101

A8JFY4              	100.00%		H3GA42              	100.00%
Bootstrap support for A8JFY4 as seed ortholog is 99%.
Bootstrap support for H3GA42 as seed ortholog is 99%.

Group of orthologs #868. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.ramorum:69

A8J8L4              	100.00%		H3GHT5              	100.00%
Bootstrap support for A8J8L4 as seed ortholog is 100%.
Bootstrap support for H3GHT5 as seed ortholog is 92%.

Group of orthologs #869. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.ramorum:243

A8J805              	100.00%		H3HDK0              	100.00%
Bootstrap support for A8J805 as seed ortholog is 100%.
Bootstrap support for H3HDK0 as seed ortholog is 100%.

Group of orthologs #870. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.ramorum:243

A8JH99              	100.00%		H3HD70              	100.00%
Bootstrap support for A8JH99 as seed ortholog is 100%.
Bootstrap support for H3HD70 as seed ortholog is 100%.

Group of orthologs #871. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.ramorum:48

A8JF16              	100.00%		H3GXW8              	100.00%
                    	       		H3G7D1              	10.87%
Bootstrap support for A8JF16 as seed ortholog is 98%.
Bootstrap support for H3GXW8 as seed ortholog is 89%.

Group of orthologs #872. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:242

A8HQ81              	100.00%		H3G8C7              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 100%.
Bootstrap support for H3G8C7 as seed ortholog is 100%.

Group of orthologs #873. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:242

A8I2N1              	100.00%		H3G7N8              	100.00%
Bootstrap support for A8I2N1 as seed ortholog is 99%.
Bootstrap support for H3G7N8 as seed ortholog is 100%.

Group of orthologs #874. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.ramorum:115

A8J2J7              	100.00%		H3GCN9              	100.00%
Bootstrap support for A8J2J7 as seed ortholog is 100%.
Bootstrap support for H3GCN9 as seed ortholog is 99%.

Group of orthologs #875. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.ramorum:242

Q6UPR1              	100.00%		H3GGZ3              	100.00%
Bootstrap support for Q6UPR1 as seed ortholog is 100%.
Bootstrap support for H3GGZ3 as seed ortholog is 100%.

Group of orthologs #876. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 P.ramorum:241

A8JBC8              	100.00%		H3H5C8              	100.00%
                    	       		H3HDM6              	90.43%
Bootstrap support for A8JBC8 as seed ortholog is 100%.
Bootstrap support for H3H5C8 as seed ortholog is 100%.

Group of orthologs #877. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:172

A8HM32              	100.00%		H3GN59              	100.00%
Bootstrap support for A8HM32 as seed ortholog is 99%.
Bootstrap support for H3GN59 as seed ortholog is 100%.

Group of orthologs #878. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:66

A8IVK0              	100.00%		H3G9M4              	100.00%
Bootstrap support for A8IVK0 as seed ortholog is 96%.
Bootstrap support for H3G9M4 as seed ortholog is 99%.

Group of orthologs #879. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 P.ramorum:241

A8J173              	100.00%		H3G781              	100.00%
Bootstrap support for A8J173 as seed ortholog is 100%.
Bootstrap support for H3G781 as seed ortholog is 100%.

Group of orthologs #880. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:59

A8JD57              	100.00%		H3G721              	100.00%
Bootstrap support for A8JD57 as seed ortholog is 96%.
Bootstrap support for H3G721 as seed ortholog is 96%.

Group of orthologs #881. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:40

A8JHI5              	100.00%		H3G925              	100.00%
Bootstrap support for A8JHI5 as seed ortholog is 100%.
Bootstrap support for H3G925 as seed ortholog is 93%.

Group of orthologs #882. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.ramorum:2

A8IEZ3              	100.00%		H3G7K4              	100.00%
Bootstrap support for A8IEZ3 as seed ortholog is 69%.
Alternative seed ortholog is A8J3D2 (22 bits away from this cluster)
Bootstrap support for H3G7K4 as seed ortholog is 53%.
Alternative seed ortholog is H3G6W2 (2 bits away from this cluster)

Group of orthologs #883. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.ramorum:40

A8JFS8              	100.00%		H3GG27              	100.00%
Bootstrap support for A8JFS8 as seed ortholog is 100%.
Bootstrap support for H3GG27 as seed ortholog is 91%.

Group of orthologs #884. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:69

A8J5Y5              	100.00%		H3GA68              	100.00%
Bootstrap support for A8J5Y5 as seed ortholog is 99%.
Bootstrap support for H3GA68 as seed ortholog is 96%.

Group of orthologs #885. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:63

A8J9T9              	100.00%		H3G7M1              	100.00%
Bootstrap support for A8J9T9 as seed ortholog is 86%.
Bootstrap support for H3G7M1 as seed ortholog is 93%.

Group of orthologs #886. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.ramorum:239

A8IE97              	100.00%		H3GSP4              	100.00%
Bootstrap support for A8IE97 as seed ortholog is 100%.
Bootstrap support for H3GSP4 as seed ortholog is 100%.

Group of orthologs #887. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:239

A8HYT0              	100.00%		H3HD26              	100.00%
Bootstrap support for A8HYT0 as seed ortholog is 99%.
Bootstrap support for H3HD26 as seed ortholog is 100%.

Group of orthologs #888. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.ramorum:239

A8ILJ9              	100.00%		H3HCG4              	100.00%
Bootstrap support for A8ILJ9 as seed ortholog is 100%.
Bootstrap support for H3HCG4 as seed ortholog is 100%.

Group of orthologs #889. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:23

Q6V8K6              	100.00%		H3GW41              	100.00%
                    	       		H3HB65              	17.70%
                    	       		H3GIW2              	17.41%
Bootstrap support for Q6V8K6 as seed ortholog is 91%.
Bootstrap support for H3GW41 as seed ortholog is 72%.
Alternative seed ortholog is H3GVV5 (23 bits away from this cluster)

Group of orthologs #890. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.ramorum:238

A8IGY1              	100.00%		H3G9F0              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for H3G9F0 as seed ortholog is 100%.

Group of orthologs #891. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.ramorum:238

A8I9G5              	100.00%		H3GLU5              	100.00%
Bootstrap support for A8I9G5 as seed ortholog is 100%.
Bootstrap support for H3GLU5 as seed ortholog is 100%.

Group of orthologs #892. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.ramorum:238

A8J593              	100.00%		H3G8T4              	100.00%
Bootstrap support for A8J593 as seed ortholog is 100%.
Bootstrap support for H3G8T4 as seed ortholog is 100%.

Group of orthologs #893. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.ramorum:238

A8I893              	100.00%		H3H1Q7              	100.00%
Bootstrap support for A8I893 as seed ortholog is 100%.
Bootstrap support for H3H1Q7 as seed ortholog is 100%.

Group of orthologs #894. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.ramorum:164

A8IF80              	100.00%		H3GAD0              	100.00%
                    	       		H3GA23              	45.51%
Bootstrap support for A8IF80 as seed ortholog is 100%.
Bootstrap support for H3GAD0 as seed ortholog is 100%.

Group of orthologs #895. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.ramorum:237

A8I728              	100.00%		H3G7C2              	100.00%
Bootstrap support for A8I728 as seed ortholog is 100%.
Bootstrap support for H3G7C2 as seed ortholog is 100%.

Group of orthologs #896. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.ramorum:74

A8IJX8              	100.00%		H3G670              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for H3G670 as seed ortholog is 99%.

Group of orthologs #897. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.ramorum:237

A8J7Y2              	100.00%		H3G855              	100.00%
Bootstrap support for A8J7Y2 as seed ortholog is 100%.
Bootstrap support for H3G855 as seed ortholog is 100%.

Group of orthologs #898. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.ramorum:237

A8JDV8              	100.00%		H3GIM1              	100.00%
Bootstrap support for A8JDV8 as seed ortholog is 100%.
Bootstrap support for H3GIM1 as seed ortholog is 100%.

Group of orthologs #899. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.ramorum:75

A8HNJ4              	100.00%		H3GAA9              	100.00%
Bootstrap support for A8HNJ4 as seed ortholog is 84%.
Bootstrap support for H3GAA9 as seed ortholog is 96%.

Group of orthologs #900. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 P.ramorum:158

A8J0I7              	100.00%		H3G9Y2              	100.00%
Bootstrap support for A8J0I7 as seed ortholog is 100%.
Bootstrap support for H3G9Y2 as seed ortholog is 99%.

Group of orthologs #901. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.ramorum:235

A8I2T0              	100.00%		H3G7U4              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for H3G7U4 as seed ortholog is 100%.

Group of orthologs #902. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.ramorum:235

A8IEP3              	100.00%		H3G971              	100.00%
Bootstrap support for A8IEP3 as seed ortholog is 100%.
Bootstrap support for H3G971 as seed ortholog is 100%.

Group of orthologs #903. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.ramorum:235

A8HYM2              	100.00%		H3GJM3              	100.00%
Bootstrap support for A8HYM2 as seed ortholog is 100%.
Bootstrap support for H3GJM3 as seed ortholog is 100%.

Group of orthologs #904. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.ramorum:235

A8JIU5              	100.00%		H3G7D8              	100.00%
Bootstrap support for A8JIU5 as seed ortholog is 100%.
Bootstrap support for H3G7D8 as seed ortholog is 100%.

Group of orthologs #905. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.ramorum:182

A8IZE5              	100.00%		H3GSB6              	100.00%
Bootstrap support for A8IZE5 as seed ortholog is 100%.
Bootstrap support for H3GSB6 as seed ortholog is 100%.

Group of orthologs #906. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:176

A8IHQ7              	100.00%		H3HD53              	100.00%
Bootstrap support for A8IHQ7 as seed ortholog is 99%.
Bootstrap support for H3HD53 as seed ortholog is 100%.

Group of orthologs #907. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:234

A8JGJ2              	100.00%		H3GJP0              	100.00%
                    	       		H3GJN4              	52.13%
                    	       		H3GJN5              	51.66%
                    	       		H3GJN3              	50.55%
                    	       		H3G906              	45.34%
                    	       		H3GMN4              	12.16%
Bootstrap support for A8JGJ2 as seed ortholog is 99%.
Bootstrap support for H3GJP0 as seed ortholog is 100%.

Group of orthologs #908. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 P.ramorum:234

A8J046              	100.00%		H3GK58              	100.00%
Bootstrap support for A8J046 as seed ortholog is 100%.
Bootstrap support for H3GK58 as seed ortholog is 100%.

Group of orthologs #909. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:150

A8IJH7              	100.00%		H3GXP2              	100.00%
Bootstrap support for A8IJH7 as seed ortholog is 99%.
Bootstrap support for H3GXP2 as seed ortholog is 99%.

Group of orthologs #910. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.ramorum:233

A8ITF3              	100.00%		H3G756              	100.00%
Bootstrap support for A8ITF3 as seed ortholog is 100%.
Bootstrap support for H3G756 as seed ortholog is 100%.

Group of orthologs #911. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.ramorum:233

A8IKZ2              	100.00%		H3GFQ7              	100.00%
Bootstrap support for A8IKZ2 as seed ortholog is 100%.
Bootstrap support for H3GFQ7 as seed ortholog is 100%.

Group of orthologs #912. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.ramorum:233

A8J073              	100.00%		H3HCT8              	100.00%
Bootstrap support for A8J073 as seed ortholog is 100%.
Bootstrap support for H3HCT8 as seed ortholog is 100%.

Group of orthologs #913. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.ramorum:130

A8IRR3              	100.00%		H3GF52              	100.00%
A8IRR2              	57.88%		H3GF53              	100.00%
                    	       		H3GF50              	41.38%
                    	       		H3GF98              	37.00%
                    	       		H3GF48              	36.33%
                    	       		H3GF49              	29.00%
Bootstrap support for A8IRR3 as seed ortholog is 100%.
Bootstrap support for H3GF52 as seed ortholog is 99%.
Bootstrap support for H3GF53 as seed ortholog is 99%.

Group of orthologs #914. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:190

A8J944              	100.00%		H3GA66              	100.00%
                    	       		H3GB57              	98.11%
Bootstrap support for A8J944 as seed ortholog is 99%.
Bootstrap support for H3GA66 as seed ortholog is 100%.

Group of orthologs #915. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.ramorum:232

A8I0B0              	100.00%		H3GNL2              	100.00%
Bootstrap support for A8I0B0 as seed ortholog is 100%.
Bootstrap support for H3GNL2 as seed ortholog is 100%.

Group of orthologs #916. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.ramorum:232

A8I815              	100.00%		H3GVG8              	100.00%
Bootstrap support for A8I815 as seed ortholog is 100%.
Bootstrap support for H3GVG8 as seed ortholog is 100%.

Group of orthologs #917. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 P.ramorum:91

A8JB86              	100.00%		H3HC35              	100.00%
Bootstrap support for A8JB86 as seed ortholog is 100%.
Bootstrap support for H3HC35 as seed ortholog is 99%.

Group of orthologs #918. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.ramorum:39

A8J7C6              	100.00%		H3H2T7              	100.00%
A8J7C5              	58.35%		H3GZX0              	5.05%
A8J7C7              	25.11%		
Bootstrap support for A8J7C6 as seed ortholog is 100%.
Bootstrap support for H3H2T7 as seed ortholog is 91%.

Group of orthologs #919. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.ramorum:230

A8I4A8              	100.00%		H3GRT1              	100.00%
                    	       		H3H884              	97.61%
Bootstrap support for A8I4A8 as seed ortholog is 100%.
Bootstrap support for H3GRT1 as seed ortholog is 100%.

Group of orthologs #920. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.ramorum:230

A8IV05              	100.00%		H3G6W3              	100.00%
Bootstrap support for A8IV05 as seed ortholog is 100%.
Bootstrap support for H3G6W3 as seed ortholog is 100%.

Group of orthologs #921. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.ramorum:230

A8J3C7              	100.00%		H3GAP3              	100.00%
Bootstrap support for A8J3C7 as seed ortholog is 100%.
Bootstrap support for H3GAP3 as seed ortholog is 100%.

Group of orthologs #922. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.ramorum:230

A8JAN2              	100.00%		H3G6D8              	100.00%
Bootstrap support for A8JAN2 as seed ortholog is 100%.
Bootstrap support for H3G6D8 as seed ortholog is 100%.

Group of orthologs #923. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.ramorum:230

A8IIC7              	100.00%		H3GYD8              	100.00%
Bootstrap support for A8IIC7 as seed ortholog is 100%.
Bootstrap support for H3GYD8 as seed ortholog is 100%.

Group of orthologs #924. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.ramorum:229

A8I1A7              	100.00%		H3G5S7              	100.00%
Bootstrap support for A8I1A7 as seed ortholog is 100%.
Bootstrap support for H3G5S7 as seed ortholog is 100%.

Group of orthologs #925. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:229

A8J9W0              	100.00%		H3G962              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 100%.
Bootstrap support for H3G962 as seed ortholog is 100%.

Group of orthologs #926. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 P.ramorum:152

A8JE11              	100.00%		H3G6A0              	100.00%
Bootstrap support for A8JE11 as seed ortholog is 100%.
Bootstrap support for H3G6A0 as seed ortholog is 100%.

Group of orthologs #927. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 P.ramorum:229

A8JGI9              	100.00%		H3G9W8              	100.00%
Bootstrap support for A8JGI9 as seed ortholog is 100%.
Bootstrap support for H3G9W8 as seed ortholog is 100%.

Group of orthologs #928. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:137

A8J0Z1              	100.00%		H3GS42              	100.00%
                    	       		H3GS41              	68.89%
                    	       		H3GS32              	40.13%
                    	       		H3GS37              	40.13%
                    	       		H3GS38              	33.08%
Bootstrap support for A8J0Z1 as seed ortholog is 99%.
Bootstrap support for H3GS42 as seed ortholog is 99%.

Group of orthologs #929. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.ramorum:228

A8J212              	100.00%		H3GAQ2              	100.00%
Bootstrap support for A8J212 as seed ortholog is 100%.
Bootstrap support for H3GAQ2 as seed ortholog is 100%.

Group of orthologs #930. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.ramorum:228

A8J1P1              	100.00%		H3GBT0              	100.00%
Bootstrap support for A8J1P1 as seed ortholog is 100%.
Bootstrap support for H3GBT0 as seed ortholog is 100%.

Group of orthologs #931. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.ramorum:228

A8IZV5              	100.00%		H3GIE5              	100.00%
Bootstrap support for A8IZV5 as seed ortholog is 100%.
Bootstrap support for H3GIE5 as seed ortholog is 100%.

Group of orthologs #932. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.ramorum:150

A8IHY4              	100.00%		H3GY19              	100.00%
Bootstrap support for A8IHY4 as seed ortholog is 100%.
Bootstrap support for H3GY19 as seed ortholog is 99%.

Group of orthologs #933. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.ramorum:228

A8JG68              	100.00%		H3GB03              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for H3GB03 as seed ortholog is 100%.

Group of orthologs #934. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.ramorum:228

A8JB59              	100.00%		H3GG58              	100.00%
Bootstrap support for A8JB59 as seed ortholog is 100%.
Bootstrap support for H3GG58 as seed ortholog is 100%.

Group of orthologs #935. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:227

A8HWI6              	100.00%		H3G9F9              	100.00%
Bootstrap support for A8HWI6 as seed ortholog is 100%.
Bootstrap support for H3G9F9 as seed ortholog is 100%.

Group of orthologs #936. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:227

A8IHG8              	100.00%		H3GBZ0              	100.00%
Bootstrap support for A8IHG8 as seed ortholog is 100%.
Bootstrap support for H3GBZ0 as seed ortholog is 100%.

Group of orthologs #937. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:71

A8IZV6              	100.00%		H3G9B5              	100.00%
Bootstrap support for A8IZV6 as seed ortholog is 96%.
Bootstrap support for H3G9B5 as seed ortholog is 99%.

Group of orthologs #938. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:32

A8IQP6              	100.00%		H3GKT2              	100.00%
Bootstrap support for A8IQP6 as seed ortholog is 100%.
Bootstrap support for H3GKT2 as seed ortholog is 73%.
Alternative seed ortholog is H3GR10 (32 bits away from this cluster)

Group of orthologs #939. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:227

A8J7L4              	100.00%		H3GBK8              	100.00%
Bootstrap support for A8J7L4 as seed ortholog is 100%.
Bootstrap support for H3GBK8 as seed ortholog is 100%.

Group of orthologs #940. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:227

A8JE85              	100.00%		H3G5K1              	100.00%
Bootstrap support for A8JE85 as seed ortholog is 100%.
Bootstrap support for H3G5K1 as seed ortholog is 100%.

Group of orthologs #941. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:227

A8JDZ8              	100.00%		H3GAQ7              	100.00%
Bootstrap support for A8JDZ8 as seed ortholog is 100%.
Bootstrap support for H3GAQ7 as seed ortholog is 100%.

Group of orthologs #942. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:227

A8J5B7              	100.00%		H3GLX9              	100.00%
Bootstrap support for A8J5B7 as seed ortholog is 100%.
Bootstrap support for H3GLX9 as seed ortholog is 100%.

Group of orthologs #943. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.ramorum:70

A8HTR9              	100.00%		H3HEH4              	100.00%
Bootstrap support for A8HTR9 as seed ortholog is 100%.
Bootstrap support for H3HEH4 as seed ortholog is 97%.

Group of orthologs #944. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.ramorum:227

A8J5V8              	100.00%		H3HBD8              	100.00%
Bootstrap support for A8J5V8 as seed ortholog is 91%.
Bootstrap support for H3HBD8 as seed ortholog is 100%.

Group of orthologs #945. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 P.ramorum:226

A8J0Q5              	100.00%		H3GAA0              	100.00%
Bootstrap support for A8J0Q5 as seed ortholog is 100%.
Bootstrap support for H3GAA0 as seed ortholog is 100%.

Group of orthologs #946. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.ramorum:65

A8IRY5              	100.00%		H3GPS7              	100.00%
Bootstrap support for A8IRY5 as seed ortholog is 56%.
Alternative seed ortholog is A8J4L8 (12 bits away from this cluster)
Bootstrap support for H3GPS7 as seed ortholog is 89%.

Group of orthologs #947. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:226

A8J6S1              	100.00%		H3GE06              	100.00%
Bootstrap support for A8J6S1 as seed ortholog is 100%.
Bootstrap support for H3GE06 as seed ortholog is 100%.

Group of orthologs #948. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 P.ramorum:226

A8JE06              	100.00%		H3G9Y9              	100.00%
Bootstrap support for A8JE06 as seed ortholog is 100%.
Bootstrap support for H3G9Y9 as seed ortholog is 100%.

Group of orthologs #949. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 P.ramorum:226

A8JHY2              	100.00%		H3GG45              	100.00%
Bootstrap support for A8JHY2 as seed ortholog is 100%.
Bootstrap support for H3GG45 as seed ortholog is 100%.

Group of orthologs #950. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:180

Q8LP69              	71.37%		H3GKC1              	100.00%
Q8LP71              	100.00%		H3GKC2              	100.00%
A8ISD6              	71.15%		H3GKB7              	71.09%
A8ISD7              	71.15%		H3GKC0              	70.95%
                    	       		H3G9R3              	7.23%
Bootstrap support for Q8LP71 as seed ortholog is 100%.
Bootstrap support for H3GKC1 as seed ortholog is 99%.
Bootstrap support for H3GKC2 as seed ortholog is 99%.

Group of orthologs #951. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.ramorum:225

A8IS69              	100.00%		H3G7D0              	100.00%
A8IS67              	48.91%		H3GUX7              	88.91%
A8IQK6              	20.52%		
A8JH87              	8.52%		
Bootstrap support for A8IS69 as seed ortholog is 99%.
Bootstrap support for H3G7D0 as seed ortholog is 100%.

Group of orthologs #952. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:225

A8IKS4              	100.00%		H3G8S5              	100.00%
                    	       		H3GB07              	99.77%
Bootstrap support for A8IKS4 as seed ortholog is 100%.
Bootstrap support for H3G8S5 as seed ortholog is 100%.

Group of orthologs #953. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:225

A8IQY2              	100.00%		H3G6T6              	100.00%
Bootstrap support for A8IQY2 as seed ortholog is 100%.
Bootstrap support for H3G6T6 as seed ortholog is 100%.

Group of orthologs #954. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:225

A8I029              	100.00%		H3GH31              	100.00%
Bootstrap support for A8I029 as seed ortholog is 100%.
Bootstrap support for H3GH31 as seed ortholog is 100%.

Group of orthologs #955. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:225

A8JDZ9              	100.00%		H3GA41              	100.00%
Bootstrap support for A8JDZ9 as seed ortholog is 100%.
Bootstrap support for H3GA41 as seed ortholog is 100%.

Group of orthologs #956. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:225

A8JAF2              	100.00%		H3GR18              	100.00%
Bootstrap support for A8JAF2 as seed ortholog is 100%.
Bootstrap support for H3GR18 as seed ortholog is 100%.

Group of orthologs #957. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.ramorum:225

A8J218              	100.00%		H3HBC6              	100.00%
Bootstrap support for A8J218 as seed ortholog is 100%.
Bootstrap support for H3HBC6 as seed ortholog is 100%.

Group of orthologs #958. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:142

A8IZG4              	100.00%		H3G614              	100.00%
Bootstrap support for A8IZG4 as seed ortholog is 99%.
Bootstrap support for H3G614 as seed ortholog is 99%.

Group of orthologs #959. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 P.ramorum:224

A8IHF2              	100.00%		H3H0I5              	100.00%
Bootstrap support for A8IHF2 as seed ortholog is 100%.
Bootstrap support for H3H0I5 as seed ortholog is 100%.

Group of orthologs #960. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.ramorum:223

A8J6T0              	100.00%		H3GSH6              	100.00%
A8JHP2              	16.11%		
Bootstrap support for A8J6T0 as seed ortholog is 100%.
Bootstrap support for H3GSH6 as seed ortholog is 100%.

Group of orthologs #961. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.ramorum:11

A8IVQ7              	100.00%		H3G8K4              	100.00%
Bootstrap support for A8IVQ7 as seed ortholog is 97%.
Bootstrap support for H3G8K4 as seed ortholog is 63%.
Alternative seed ortholog is H3G525 (11 bits away from this cluster)

Group of orthologs #962. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.ramorum:223

A8ITE5              	100.00%		H3GMF6              	100.00%
Bootstrap support for A8ITE5 as seed ortholog is 100%.
Bootstrap support for H3GMF6 as seed ortholog is 100%.

Group of orthologs #963. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:137

A8IC82              	100.00%		H3GXB4              	100.00%
Bootstrap support for A8IC82 as seed ortholog is 83%.
Bootstrap support for H3GXB4 as seed ortholog is 99%.

Group of orthologs #964. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.ramorum:223

A8JC02              	100.00%		H3GXU5              	100.00%
Bootstrap support for A8JC02 as seed ortholog is 100%.
Bootstrap support for H3GXU5 as seed ortholog is 100%.

Group of orthologs #965. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.ramorum:133

A8HMJ8              	100.00%		H3GDW2              	100.00%
A8IHE7              	8.36%		H3GFL3              	19.30%
                    	       		H3GXW0              	18.14%
                    	       		H3GXV6              	14.21%
                    	       		H3GXV8              	13.94%
                    	       		H3GQA0              	12.60%
Bootstrap support for A8HMJ8 as seed ortholog is 100%.
Bootstrap support for H3GDW2 as seed ortholog is 99%.

Group of orthologs #966. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.ramorum:222

A8IQU9              	100.00%		H3G515              	100.00%
Bootstrap support for A8IQU9 as seed ortholog is 100%.
Bootstrap support for H3G515 as seed ortholog is 100%.

Group of orthologs #967. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.ramorum:222

A8J1X5              	100.00%		H3G8A4              	100.00%
Bootstrap support for A8J1X5 as seed ortholog is 71%.
Alternative seed ortholog is A8IVY4 (14 bits away from this cluster)
Bootstrap support for H3G8A4 as seed ortholog is 100%.

Group of orthologs #968. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.ramorum:54

A8IXI7              	100.00%		H3GDW0              	100.00%
Bootstrap support for A8IXI7 as seed ortholog is 75%.
Bootstrap support for H3GDW0 as seed ortholog is 95%.

Group of orthologs #969. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:36

A8J6A0              	100.00%		H3G9M6              	100.00%
Bootstrap support for A8J6A0 as seed ortholog is 100%.
Bootstrap support for H3G9M6 as seed ortholog is 92%.

Group of orthologs #970. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:221

A8IAZ1              	100.00%		H3GIL5              	100.00%
Bootstrap support for A8IAZ1 as seed ortholog is 99%.
Bootstrap support for H3GIL5 as seed ortholog is 100%.

Group of orthologs #971. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.ramorum:221

Q8HEB4              	100.00%		H3GII1              	100.00%
Bootstrap support for Q8HEB4 as seed ortholog is 66%.
Alternative seed ortholog is A8JJ26 (11 bits away from this cluster)
Bootstrap support for H3GII1 as seed ortholog is 100%.

Group of orthologs #972. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:136

A8HQ87              	100.00%		H3G861              	100.00%
Bootstrap support for A8HQ87 as seed ortholog is 100%.
Bootstrap support for H3G861 as seed ortholog is 100%.

Group of orthologs #973. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:220

A8J9U3              	100.00%		H3G9P1              	100.00%
Bootstrap support for A8J9U3 as seed ortholog is 99%.
Bootstrap support for H3G9P1 as seed ortholog is 100%.

Group of orthologs #974. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:126

A8J6H1              	100.00%		H3GJM6              	100.00%
Bootstrap support for A8J6H1 as seed ortholog is 100%.
Bootstrap support for H3GJM6 as seed ortholog is 100%.

Group of orthologs #975. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.ramorum:81

A8JAQ0              	100.00%		H3GRS2              	100.00%
Bootstrap support for A8JAQ0 as seed ortholog is 56%.
Alternative seed ortholog is A8I0G0 (27 bits away from this cluster)
Bootstrap support for H3GRS2 as seed ortholog is 97%.

Group of orthologs #976. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:220

A8JBY6              	100.00%		H3HB77              	100.00%
Bootstrap support for A8JBY6 as seed ortholog is 91%.
Bootstrap support for H3HB77 as seed ortholog is 100%.

Group of orthologs #977. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.ramorum:137

A8JCX9              	100.00%		H3G8V5              	100.00%
Bootstrap support for A8JCX9 as seed ortholog is 100%.
Bootstrap support for H3G8V5 as seed ortholog is 100%.

Group of orthologs #978. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.ramorum:73

A8JC41              	100.00%		H3GCK3              	100.00%
                    	       		H3GMG0              	32.58%
Bootstrap support for A8JC41 as seed ortholog is 77%.
Bootstrap support for H3GCK3 as seed ortholog is 92%.

Group of orthologs #979. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.ramorum:218

A8HQD7              	100.00%		H3G9R5              	100.00%
Bootstrap support for A8HQD7 as seed ortholog is 100%.
Bootstrap support for H3G9R5 as seed ortholog is 100%.

Group of orthologs #980. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.ramorum:218

A8IC04              	100.00%		H3GPB1              	100.00%
Bootstrap support for A8IC04 as seed ortholog is 100%.
Bootstrap support for H3GPB1 as seed ortholog is 100%.

Group of orthologs #981. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:102

A8J7V0              	100.00%		H3GYT1              	100.00%
Bootstrap support for A8J7V0 as seed ortholog is 98%.
Bootstrap support for H3GYT1 as seed ortholog is 98%.

Group of orthologs #982. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.ramorum:217

A8I7Y8              	100.00%		H3GAS9              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for H3GAS9 as seed ortholog is 100%.

Group of orthologs #983. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.ramorum:217

A8IZH0              	100.00%		H3GV69              	100.00%
Bootstrap support for A8IZH0 as seed ortholog is 100%.
Bootstrap support for H3GV69 as seed ortholog is 100%.

Group of orthologs #984. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:217

A8JEM3              	100.00%		H3GZZ4              	100.00%
Bootstrap support for A8JEM3 as seed ortholog is 100%.
Bootstrap support for H3GZZ4 as seed ortholog is 100%.

Group of orthologs #985. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.ramorum:127

A8JAS5              	100.00%		H3H7V9              	100.00%
A8IM62              	11.00%		H3H1K5              	58.27%
                    	       		H3GAM2              	15.09%
Bootstrap support for A8JAS5 as seed ortholog is 100%.
Bootstrap support for H3H7V9 as seed ortholog is 99%.

Group of orthologs #986. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.ramorum:216

A8JBA8              	100.00%		H3G8M5              	100.00%
Bootstrap support for A8JBA8 as seed ortholog is 100%.
Bootstrap support for H3G8M5 as seed ortholog is 100%.

Group of orthologs #987. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:216

A8IJQ4              	100.00%		H3GU44              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for H3GU44 as seed ortholog is 100%.

Group of orthologs #988. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.ramorum:50

A8I9E8              	100.00%		H3H586              	100.00%
Bootstrap support for A8I9E8 as seed ortholog is 100%.
Bootstrap support for H3H586 as seed ortholog is 98%.

Group of orthologs #989. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.ramorum:216

A8JBV1              	100.00%		H3GIG8              	100.00%
Bootstrap support for A8JBV1 as seed ortholog is 100%.
Bootstrap support for H3GIG8 as seed ortholog is 100%.

Group of orthologs #990. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:215

A8HXZ5              	100.00%		H3G953              	100.00%
                    	       		H3G954              	100.00%
Bootstrap support for A8HXZ5 as seed ortholog is 100%.
Bootstrap support for H3G953 as seed ortholog is 100%.
Bootstrap support for H3G954 as seed ortholog is 100%.

Group of orthologs #991. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:215

A8HP79              	100.00%		H3G6E8              	100.00%
Bootstrap support for A8HP79 as seed ortholog is 100%.
Bootstrap support for H3G6E8 as seed ortholog is 100%.

Group of orthologs #992. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.ramorum:168

A8ILY4              	100.00%		H3GD59              	100.00%
Bootstrap support for A8ILY4 as seed ortholog is 99%.
Bootstrap support for H3GD59 as seed ortholog is 99%.

Group of orthologs #993. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:215

A8J5W6              	100.00%		H3G7Q8              	100.00%
Bootstrap support for A8J5W6 as seed ortholog is 100%.
Bootstrap support for H3G7Q8 as seed ortholog is 100%.

Group of orthologs #994. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:215

A8JDW7              	100.00%		H3GH02              	100.00%
Bootstrap support for A8JDW7 as seed ortholog is 100%.
Bootstrap support for H3GH02 as seed ortholog is 100%.

Group of orthologs #995. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:215

A8J3B4              	100.00%		H3GVB3              	100.00%
Bootstrap support for A8J3B4 as seed ortholog is 100%.
Bootstrap support for H3GVB3 as seed ortholog is 100%.

Group of orthologs #996. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.ramorum:215

A8JH66              	100.00%		H3GRN5              	100.00%
Bootstrap support for A8JH66 as seed ortholog is 100%.
Bootstrap support for H3GRN5 as seed ortholog is 100%.

Group of orthologs #997. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:214

A8HSU7              	100.00%		H3G8T5              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for H3G8T5 as seed ortholog is 100%.

Group of orthologs #998. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:62

A8IWV3              	100.00%		H3HDC8              	100.00%
Bootstrap support for A8IWV3 as seed ortholog is 100%.
Bootstrap support for H3HDC8 as seed ortholog is 89%.

Group of orthologs #999. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:214

A8JIP7              	100.00%		H3GVQ2              	100.00%
Bootstrap support for A8JIP7 as seed ortholog is 100%.
Bootstrap support for H3GVQ2 as seed ortholog is 100%.

Group of orthologs #1000. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:132

A8JB06              	100.00%		H3HBJ2              	100.00%
Bootstrap support for A8JB06 as seed ortholog is 100%.
Bootstrap support for H3HBJ2 as seed ortholog is 99%.

Group of orthologs #1001. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.ramorum:214

Q6V9B3              	100.00%		H3H3M7              	100.00%
Bootstrap support for Q6V9B3 as seed ortholog is 100%.
Bootstrap support for H3H3M7 as seed ortholog is 100%.

Group of orthologs #1002. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.ramorum:213

A8IDZ9              	100.00%		H3G819              	100.00%
                    	       		H3G820              	78.84%
Bootstrap support for A8IDZ9 as seed ortholog is 100%.
Bootstrap support for H3G819 as seed ortholog is 100%.

Group of orthologs #1003. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.ramorum:213

A8IV36              	100.00%		H3G9I2              	100.00%
Bootstrap support for A8IV36 as seed ortholog is 100%.
Bootstrap support for H3G9I2 as seed ortholog is 100%.

Group of orthologs #1004. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.ramorum:213

A8IZA4              	100.00%		H3G7U0              	100.00%
Bootstrap support for A8IZA4 as seed ortholog is 100%.
Bootstrap support for H3G7U0 as seed ortholog is 100%.

Group of orthologs #1005. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:127

A8J435              	100.00%		H3GD85              	100.00%
Bootstrap support for A8J435 as seed ortholog is 94%.
Bootstrap support for H3GD85 as seed ortholog is 99%.

Group of orthologs #1006. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.ramorum:213

A6YCJ2              	100.00%		H3H4D1              	100.00%
Bootstrap support for A6YCJ2 as seed ortholog is 100%.
Bootstrap support for H3H4D1 as seed ortholog is 100%.

Group of orthologs #1007. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:213

A8INA8              	100.00%		H3GRP7              	100.00%
Bootstrap support for A8INA8 as seed ortholog is 99%.
Bootstrap support for H3GRP7 as seed ortholog is 100%.

Group of orthologs #1008. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:79

A8IF06              	100.00%		H3H0U6              	100.00%
Bootstrap support for A8IF06 as seed ortholog is 99%.
Bootstrap support for H3H0U6 as seed ortholog is 98%.

Group of orthologs #1009. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:212

A8J6E9              	100.00%		H3G4Y8              	100.00%
A8HNY7              	100.00%		H3GBC3              	100.00%
                    	       		H3G6T0              	12.06%
Bootstrap support for A8J6E9 as seed ortholog is 99%.
Bootstrap support for A8HNY7 as seed ortholog is 99%.
Bootstrap support for H3G4Y8 as seed ortholog is 100%.
Bootstrap support for H3GBC3 as seed ortholog is 100%.

Group of orthologs #1010. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.ramorum:212

A8HP30              	100.00%		H3G8T6              	100.00%
                    	       		H3G8T7              	71.37%
Bootstrap support for A8HP30 as seed ortholog is 100%.
Bootstrap support for H3G8T6 as seed ortholog is 100%.

Group of orthologs #1011. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.ramorum:212

A8JHC3              	100.00%		H3GAY1              	100.00%
                    	       		H3GAD4              	80.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for H3GAY1 as seed ortholog is 100%.

Group of orthologs #1012. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.ramorum:212

A8HPN6              	100.00%		H3GBM4              	100.00%
Bootstrap support for A8HPN6 as seed ortholog is 100%.
Bootstrap support for H3GBM4 as seed ortholog is 100%.

Group of orthologs #1013. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:164

A8INH7              	100.00%		H3G6Y5              	100.00%
Bootstrap support for A8INH7 as seed ortholog is 99%.
Bootstrap support for H3G6Y5 as seed ortholog is 99%.

Group of orthologs #1014. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.ramorum:212

A8J0V4              	100.00%		H3G7K9              	100.00%
Bootstrap support for A8J0V4 as seed ortholog is 100%.
Bootstrap support for H3G7K9 as seed ortholog is 100%.

Group of orthologs #1015. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.ramorum:212

A8ICC8              	100.00%		H3GPI8              	100.00%
Bootstrap support for A8ICC8 as seed ortholog is 99%.
Bootstrap support for H3GPI8 as seed ortholog is 100%.

Group of orthologs #1016. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:212

A8J513              	100.00%		H3GGK3              	100.00%
Bootstrap support for A8J513 as seed ortholog is 76%.
Bootstrap support for H3GGK3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:22

A8I0J1              	100.00%		H3H242              	100.00%
Bootstrap support for A8I0J1 as seed ortholog is 90%.
Bootstrap support for H3H242 as seed ortholog is 67%.
Alternative seed ortholog is H3G7G7 (22 bits away from this cluster)

Group of orthologs #1018. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:35

A8IHW0              	100.00%		H3GN11              	100.00%
A8HPG3              	12.64%		H3H5V1              	20.05%
A8HNF6              	8.01%		H3GN94              	19.63%
A8IIZ1              	7.13%		H3H410              	15.96%
                    	       		H3GRJ5              	14.20%
Bootstrap support for A8IHW0 as seed ortholog is 90%.
Bootstrap support for H3GN11 as seed ortholog is 80%.

Group of orthologs #1019. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.ramorum:211

A8JGR8              	100.00%		H3GHH2              	100.00%
A8JGR9              	40.62%		
Bootstrap support for A8JGR8 as seed ortholog is 100%.
Bootstrap support for H3GHH2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:211

A8I768              	100.00%		H3G929              	100.00%
Bootstrap support for A8I768 as seed ortholog is 94%.
Bootstrap support for H3G929 as seed ortholog is 100%.

Group of orthologs #1021. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:107

A8J3F7              	100.00%		H3G8W4              	100.00%
Bootstrap support for A8J3F7 as seed ortholog is 98%.
Bootstrap support for H3G8W4 as seed ortholog is 99%.

Group of orthologs #1022. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.ramorum:211

A8ISN1              	100.00%		H3GVC9              	100.00%
Bootstrap support for A8ISN1 as seed ortholog is 100%.
Bootstrap support for H3GVC9 as seed ortholog is 100%.

Group of orthologs #1023. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.ramorum:211

A8J8J1              	100.00%		H3GMB5              	100.00%
Bootstrap support for A8J8J1 as seed ortholog is 100%.
Bootstrap support for H3GMB5 as seed ortholog is 100%.

Group of orthologs #1024. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:23

A8IWK6              	100.00%		H3GVG5              	100.00%
A8J822              	8.85%		H3H6B0              	100.00%
                    	       		H3GHI1              	47.79%
Bootstrap support for A8IWK6 as seed ortholog is 97%.
Bootstrap support for H3GVG5 as seed ortholog is 78%.
Bootstrap support for H3H6B0 as seed ortholog is 77%.

Group of orthologs #1025. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.ramorum:210

A8IA42              	100.00%		H3G4X8              	100.00%
A8JC21              	33.04%		
A8I9S9              	19.55%		
Bootstrap support for A8IA42 as seed ortholog is 100%.
Bootstrap support for H3G4X8 as seed ortholog is 100%.

Group of orthologs #1026. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:76

A8I427              	100.00%		H3G7R5              	100.00%
Bootstrap support for A8I427 as seed ortholog is 99%.
Bootstrap support for H3G7R5 as seed ortholog is 99%.

Group of orthologs #1027. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.ramorum:210

A8HZM0              	100.00%		H3GGS9              	100.00%
Bootstrap support for A8HZM0 as seed ortholog is 100%.
Bootstrap support for H3GGS9 as seed ortholog is 100%.

Group of orthologs #1028. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.ramorum:210

A8J786              	100.00%		H3G8H1              	100.00%
Bootstrap support for A8J786 as seed ortholog is 100%.
Bootstrap support for H3G8H1 as seed ortholog is 100%.

Group of orthologs #1029. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 P.ramorum:97

A8J1X0              	100.00%		H3GJ16              	100.00%
Bootstrap support for A8J1X0 as seed ortholog is 77%.
Bootstrap support for H3GJ16 as seed ortholog is 99%.

Group of orthologs #1030. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.ramorum:210

A8IRS5              	100.00%		H3GRS6              	100.00%
Bootstrap support for A8IRS5 as seed ortholog is 100%.
Bootstrap support for H3GRS6 as seed ortholog is 100%.

Group of orthologs #1031. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.ramorum:210

A8JCE7              	100.00%		H3GHZ5              	100.00%
Bootstrap support for A8JCE7 as seed ortholog is 100%.
Bootstrap support for H3GHZ5 as seed ortholog is 100%.

Group of orthologs #1032. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.ramorum:210

A8J3D7              	100.00%		H3HD85              	100.00%
Bootstrap support for A8J3D7 as seed ortholog is 100%.
Bootstrap support for H3HD85 as seed ortholog is 100%.

Group of orthologs #1033. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:96

A8HTI5              	100.00%		H3GBF7              	100.00%
Bootstrap support for A8HTI5 as seed ortholog is 87%.
Bootstrap support for H3GBF7 as seed ortholog is 96%.

Group of orthologs #1034. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 P.ramorum:209

A8J3X9              	100.00%		H3G7A8              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 100%.
Bootstrap support for H3G7A8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 P.ramorum:209

A8IY13              	100.00%		H3GKX8              	100.00%
Bootstrap support for A8IY13 as seed ortholog is 100%.
Bootstrap support for H3GKX8 as seed ortholog is 100%.

Group of orthologs #1036. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.ramorum:208

A8HSA2              	100.00%		H3GCZ6              	100.00%
A8J1H0              	100.00%		H3GCZ7              	100.00%
A8IUV9              	43.39%		H3GCZ5              	77.63%
A8JFV7              	39.43%		H3GCY7              	68.78%
Q8RUT6              	29.91%		H3G6M1              	65.67%
Q6QBS6              	9.52%		
Q6QBS7              	7.42%		
Bootstrap support for A8HSA2 as seed ortholog is 99%.
Bootstrap support for A8J1H0 as seed ortholog is 99%.
Bootstrap support for H3GCZ6 as seed ortholog is 100%.
Bootstrap support for H3GCZ7 as seed ortholog is 100%.

Group of orthologs #1037. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:208

A8HPS0              	100.00%		H3GBZ8              	100.00%
Bootstrap support for A8HPS0 as seed ortholog is 99%.
Bootstrap support for H3GBZ8 as seed ortholog is 100%.

Group of orthologs #1038. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.ramorum:208

A8IVU0              	100.00%		H3G8D4              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for H3G8D4 as seed ortholog is 100%.

Group of orthologs #1039. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.ramorum:208

A8IEJ0              	100.00%		H3GQJ8              	100.00%
Bootstrap support for A8IEJ0 as seed ortholog is 100%.
Bootstrap support for H3GQJ8 as seed ortholog is 100%.

Group of orthologs #1040. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.ramorum:39

A8JCW5              	100.00%		H3G8S0              	100.00%
Bootstrap support for A8JCW5 as seed ortholog is 100%.
Bootstrap support for H3G8S0 as seed ortholog is 86%.

Group of orthologs #1041. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.ramorum:208

Q944M9              	100.00%		H3G6D6              	100.00%
Bootstrap support for Q944M9 as seed ortholog is 100%.
Bootstrap support for H3G6D6 as seed ortholog is 100%.

Group of orthologs #1042. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.ramorum:207

A8JCU2              	100.00%		H3H3B5              	100.00%
                    	       		H3GYE7              	81.19%
                    	       		H3GYF0              	81.19%
                    	       		H3H1J7              	78.44%
                    	       		H3H3B4              	63.99%
                    	       		H3GQJ6              	16.51%
                    	       		H3GQJ5              	13.53%
                    	       		H3GUH5              	13.53%
                    	       		H3GQJ7              	12.61%
Bootstrap support for A8JCU2 as seed ortholog is 99%.
Bootstrap support for H3H3B5 as seed ortholog is 100%.

Group of orthologs #1043. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:207

A8IAG6              	100.00%		H3GE34              	100.00%
                    	       		H3GSQ0              	5.55%
Bootstrap support for A8IAG6 as seed ortholog is 100%.
Bootstrap support for H3GE34 as seed ortholog is 100%.

Group of orthologs #1044. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.ramorum:207

A8JEC6              	100.00%		H3GA94              	100.00%
                    	       		H3G7R9              	69.44%
Bootstrap support for A8JEC6 as seed ortholog is 71%.
Alternative seed ortholog is A8IIQ5 (31 bits away from this cluster)
Bootstrap support for H3GA94 as seed ortholog is 100%.

Group of orthologs #1045. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:207

Q948T5              	100.00%		H3GNT3              	100.00%
A8IG47              	19.42%		
Bootstrap support for Q948T5 as seed ortholog is 100%.
Bootstrap support for H3GNT3 as seed ortholog is 100%.

Group of orthologs #1046. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:18

A8JHJ0              	100.00%		H3H6P7              	100.00%
                    	       		H3H171              	99.30%
Bootstrap support for A8JHJ0 as seed ortholog is 90%.
Bootstrap support for H3H6P7 as seed ortholog is 68%.
Alternative seed ortholog is H3GUG3 (18 bits away from this cluster)

Group of orthologs #1047. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:207

A8HPX6              	100.00%		H3G899              	100.00%
Bootstrap support for A8HPX6 as seed ortholog is 99%.
Bootstrap support for H3G899 as seed ortholog is 100%.

Group of orthologs #1048. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:207

A8I5B9              	100.00%		H3G7A1              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for H3G7A1 as seed ortholog is 100%.

Group of orthologs #1049. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:207

A8IB12              	100.00%		H3G5M6              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 99%.
Bootstrap support for H3G5M6 as seed ortholog is 100%.

Group of orthologs #1050. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:207

A8IJK3              	100.00%		H3G9C3              	100.00%
Bootstrap support for A8IJK3 as seed ortholog is 100%.
Bootstrap support for H3G9C3 as seed ortholog is 100%.

Group of orthologs #1051. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:207

A8IZM6              	100.00%		H3GBS5              	100.00%
Bootstrap support for A8IZM6 as seed ortholog is 100%.
Bootstrap support for H3GBS5 as seed ortholog is 100%.

Group of orthologs #1052. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:88

A8J274              	100.00%		H3GQ39              	100.00%
Bootstrap support for A8J274 as seed ortholog is 99%.
Bootstrap support for H3GQ39 as seed ortholog is 99%.

Group of orthologs #1053. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.ramorum:207

A8IA89              	100.00%		H3HCE9              	100.00%
Bootstrap support for A8IA89 as seed ortholog is 100%.
Bootstrap support for H3HCE9 as seed ortholog is 100%.

Group of orthologs #1054. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.ramorum:90

A8J275              	100.00%		H3H0P3              	100.00%
Bootstrap support for A8J275 as seed ortholog is 100%.
Bootstrap support for H3H0P3 as seed ortholog is 99%.

Group of orthologs #1055. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:206

A8HVP2              	100.00%		H3G6N3              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 100%.
Bootstrap support for H3G6N3 as seed ortholog is 100%.

Group of orthologs #1056. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.ramorum:206

A8IGJ8              	100.00%		H3GH76              	100.00%
Bootstrap support for A8IGJ8 as seed ortholog is 100%.
Bootstrap support for H3GH76 as seed ortholog is 100%.

Group of orthologs #1057. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.ramorum:104

A8J4N7              	100.00%		H3GFH2              	100.00%
Bootstrap support for A8J4N7 as seed ortholog is 77%.
Bootstrap support for H3GFH2 as seed ortholog is 99%.

Group of orthologs #1058. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:113

A8ISJ9              	100.00%		H3GAV4              	100.00%
                    	       		H3GAG2              	15.50%
Bootstrap support for A8ISJ9 as seed ortholog is 100%.
Bootstrap support for H3GAV4 as seed ortholog is 99%.

Group of orthologs #1059. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.ramorum:205

A8JEV0              	100.00%		H3GEL4              	100.00%
                    	       		H3GEL5              	20.95%
Bootstrap support for A8JEV0 as seed ortholog is 100%.
Bootstrap support for H3GEL4 as seed ortholog is 100%.

Group of orthologs #1060. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.ramorum:205

Q8H6H9              	100.00%		H3GKX9              	100.00%
                    	       		H3GKY2              	100.00%
Bootstrap support for Q8H6H9 as seed ortholog is 100%.
Bootstrap support for H3GKX9 as seed ortholog is 100%.
Bootstrap support for H3GKY2 as seed ortholog is 100%.

Group of orthologs #1061. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.ramorum:205

A8HYU2              	100.00%		H3GFZ5              	100.00%
Bootstrap support for A8HYU2 as seed ortholog is 100%.
Bootstrap support for H3GFZ5 as seed ortholog is 100%.

Group of orthologs #1062. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.ramorum:65

A8I0Q7              	100.00%		H3GM26              	100.00%
Bootstrap support for A8I0Q7 as seed ortholog is 100%.
Bootstrap support for H3GM26 as seed ortholog is 96%.

Group of orthologs #1063. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.ramorum:205

A8J8S7              	100.00%		H3G7M3              	100.00%
Bootstrap support for A8J8S7 as seed ortholog is 100%.
Bootstrap support for H3G7M3 as seed ortholog is 100%.

Group of orthologs #1064. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:91

A8JF99              	100.00%		H3G5F9              	100.00%
Bootstrap support for A8JF99 as seed ortholog is 99%.
Bootstrap support for H3G5F9 as seed ortholog is 99%.

Group of orthologs #1065. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.ramorum:205

A8J591              	100.00%		H3GJ86              	100.00%
Bootstrap support for A8J591 as seed ortholog is 100%.
Bootstrap support for H3GJ86 as seed ortholog is 100%.

Group of orthologs #1066. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.ramorum:205

A8IR87              	100.00%		H3GXF2              	100.00%
Bootstrap support for A8IR87 as seed ortholog is 100%.
Bootstrap support for H3GXF2 as seed ortholog is 100%.

Group of orthologs #1067. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.ramorum:35

A8IX73              	100.00%		H3GAV1              	100.00%
                    	       		H3G9G5              	53.65%
                    	       		H3G8G9              	8.81%
                    	       		H3G9A9              	7.75%
                    	       		H3GKD0              	7.60%
                    	       		H3GKD1              	7.60%
                    	       		H3GRI0              	7.60%
                    	       		H3G9U0              	7.45%
                    	       		H3H352              	7.14%
                    	       		H3H353              	7.14%
                    	       		H3H358              	7.14%
                    	       		H3GJI8              	6.99%
                    	       		H3GHN4              	6.53%
                    	       		H3GZ98              	6.38%
                    	       		H3H348              	6.23%
                    	       		H3GI21              	5.93%
                    	       		H3GYG3              	5.78%
                    	       		H3H1G2              	5.47%
                    	       		H3GDC9              	5.17%
Bootstrap support for A8IX73 as seed ortholog is 99%.
Bootstrap support for H3GAV1 as seed ortholog is 50%.
Alternative seed ortholog is H3G7Y1 (35 bits away from this cluster)

Group of orthologs #1068. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:139

A8IYA3              	100.00%		H3GA22              	100.00%
Bootstrap support for A8IYA3 as seed ortholog is 99%.
Bootstrap support for H3GA22 as seed ortholog is 100%.

Group of orthologs #1069. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.ramorum:204

Q5K1Y0              	100.00%		H3GXV0              	100.00%
Bootstrap support for Q5K1Y0 as seed ortholog is 100%.
Bootstrap support for H3GXV0 as seed ortholog is 100%.

Group of orthologs #1070. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.ramorum:203

A8HN69              	100.00%		H3GMC8              	100.00%
Bootstrap support for A8HN69 as seed ortholog is 100%.
Bootstrap support for H3GMC8 as seed ortholog is 100%.

Group of orthologs #1071. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.ramorum:203

A8J3I4              	100.00%		H3GCD0              	100.00%
Bootstrap support for A8J3I4 as seed ortholog is 100%.
Bootstrap support for H3GCD0 as seed ortholog is 100%.

Group of orthologs #1072. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.ramorum:117

A8J5F4              	100.00%		H3GC60              	100.00%
Bootstrap support for A8J5F4 as seed ortholog is 100%.
Bootstrap support for H3GC60 as seed ortholog is 99%.

Group of orthologs #1073. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.ramorum:203

A8JE07              	100.00%		H3GA40              	100.00%
Bootstrap support for A8JE07 as seed ortholog is 100%.
Bootstrap support for H3GA40 as seed ortholog is 100%.

Group of orthologs #1074. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:202

A8IGR6              	100.00%		H3GLF2              	100.00%
                    	       		H3GK22              	5.60%
Bootstrap support for A8IGR6 as seed ortholog is 100%.
Bootstrap support for H3GLF2 as seed ortholog is 100%.

Group of orthologs #1075. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:202

A8JGN6              	100.00%		H3G9T8              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for H3G9T8 as seed ortholog is 100%.

Group of orthologs #1076. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.ramorum:202

A8HRV5              	100.00%		H3HB24              	100.00%
Bootstrap support for A8HRV5 as seed ortholog is 100%.
Bootstrap support for H3HB24 as seed ortholog is 100%.

Group of orthologs #1077. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:202

A8JFF7              	100.00%		H3GXU2              	100.00%
Bootstrap support for A8JFF7 as seed ortholog is 98%.
Bootstrap support for H3GXU2 as seed ortholog is 100%.

Group of orthologs #1078. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:109

A8IRP8              	100.00%		H3HCK4              	100.00%
                    	       		H3GQA2              	58.72%
                    	       		H3HA71              	58.72%
Bootstrap support for A8IRP8 as seed ortholog is 99%.
Bootstrap support for H3HCK4 as seed ortholog is 99%.

Group of orthologs #1079. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.ramorum:201

A8HVA3              	100.00%		H3G9Z5              	100.00%
A8HSB0              	80.00%		
Bootstrap support for A8HVA3 as seed ortholog is 100%.
Bootstrap support for H3G9Z5 as seed ortholog is 100%.

Group of orthologs #1080. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.ramorum:30

A8J9H8              	100.00%		H3G8V0              	100.00%
A8JH12              	14.02%		
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for H3G8V0 as seed ortholog is 91%.

Group of orthologs #1081. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.ramorum:14

A8HQ72              	100.00%		H3G6G4              	100.00%
Bootstrap support for A8HQ72 as seed ortholog is 100%.
Bootstrap support for H3G6G4 as seed ortholog is 98%.

Group of orthologs #1082. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:54

A8HYY7              	100.00%		H3GTD1              	100.00%
Bootstrap support for A8HYY7 as seed ortholog is 99%.
Bootstrap support for H3GTD1 as seed ortholog is 95%.

Group of orthologs #1083. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.ramorum:200

A8J493              	100.00%		H3G940              	100.00%
Bootstrap support for A8J493 as seed ortholog is 100%.
Bootstrap support for H3G940 as seed ortholog is 100%.

Group of orthologs #1084. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.ramorum:200

A8J5J2              	100.00%		H3GBQ0              	100.00%
Bootstrap support for A8J5J2 as seed ortholog is 100%.
Bootstrap support for H3GBQ0 as seed ortholog is 100%.

Group of orthologs #1085. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.ramorum:15

A8IJF1              	100.00%		H3GYJ3              	100.00%
Bootstrap support for A8IJF1 as seed ortholog is 100%.
Bootstrap support for H3GYJ3 as seed ortholog is 66%.
Alternative seed ortholog is H3H3Y5 (15 bits away from this cluster)

Group of orthologs #1086. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.ramorum:200

Q9ATG8              	100.00%		H3G9X1              	100.00%
Bootstrap support for Q9ATG8 as seed ortholog is 100%.
Bootstrap support for H3G9X1 as seed ortholog is 100%.

Group of orthologs #1087. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.ramorum:96

A8JAR5              	100.00%		H3GSB4              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for H3GSB4 as seed ortholog is 98%.

Group of orthologs #1088. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.ramorum:199

A8HPG2              	100.00%		H3G4Z2              	100.00%
Bootstrap support for A8HPG2 as seed ortholog is 100%.
Bootstrap support for H3G4Z2 as seed ortholog is 100%.

Group of orthologs #1089. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:96

A8I7J8              	100.00%		H3GDE6              	100.00%
Bootstrap support for A8I7J8 as seed ortholog is 99%.
Bootstrap support for H3GDE6 as seed ortholog is 99%.

Group of orthologs #1090. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.ramorum:143

A8J6T1              	100.00%		H3GAY3              	100.00%
Bootstrap support for A8J6T1 as seed ortholog is 100%.
Bootstrap support for H3GAY3 as seed ortholog is 100%.

Group of orthologs #1091. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.ramorum:199

A8IDN7              	100.00%		H3H0K3              	100.00%
Bootstrap support for A8IDN7 as seed ortholog is 100%.
Bootstrap support for H3H0K3 as seed ortholog is 100%.

Group of orthologs #1092. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.ramorum:199

A8IXF4              	100.00%		H3GZE6              	100.00%
Bootstrap support for A8IXF4 as seed ortholog is 100%.
Bootstrap support for H3GZE6 as seed ortholog is 100%.

Group of orthologs #1093. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.ramorum:198

A8IAE8              	100.00%		H3GS40              	100.00%
Bootstrap support for A8IAE8 as seed ortholog is 100%.
Bootstrap support for H3GS40 as seed ortholog is 100%.

Group of orthologs #1094. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.ramorum:198

A8JAA8              	100.00%		H3G805              	100.00%
Bootstrap support for A8JAA8 as seed ortholog is 100%.
Bootstrap support for H3G805 as seed ortholog is 100%.

Group of orthologs #1095. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.ramorum:198

A8JB85              	100.00%		H3G8X4              	100.00%
Bootstrap support for A8JB85 as seed ortholog is 100%.
Bootstrap support for H3G8X4 as seed ortholog is 100%.

Group of orthologs #1096. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:198

A8JA17              	100.00%		H3GIZ2              	100.00%
Bootstrap support for A8JA17 as seed ortholog is 99%.
Bootstrap support for H3GIZ2 as seed ortholog is 100%.

Group of orthologs #1097. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.ramorum:198

A8IZ68              	100.00%		H3HB82              	100.00%
Bootstrap support for A8IZ68 as seed ortholog is 100%.
Bootstrap support for H3HB82 as seed ortholog is 100%.

Group of orthologs #1098. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.ramorum:197

A8IQZ8              	100.00%		H3GAE5              	100.00%
                    	       		H3GAY2              	99.42%
                    	       		H3G7Z4              	44.38%
Bootstrap support for A8IQZ8 as seed ortholog is 100%.
Bootstrap support for H3GAE5 as seed ortholog is 100%.

Group of orthologs #1099. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:197

A8J9Q6              	100.00%		H3HE72              	100.00%
A8J9Q4              	99.58%		
A8J9Q0              	22.09%		
Bootstrap support for A8J9Q6 as seed ortholog is 93%.
Bootstrap support for H3HE72 as seed ortholog is 100%.

Group of orthologs #1100. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.ramorum:78

A8J1E2              	100.00%		H3H1L5              	100.00%
                    	       		H3HE43              	30.19%
Bootstrap support for A8J1E2 as seed ortholog is 100%.
Bootstrap support for H3H1L5 as seed ortholog is 94%.

Group of orthologs #1101. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:197

A8J0D7              	100.00%		H3GWJ4              	100.00%
Bootstrap support for A8J0D7 as seed ortholog is 84%.
Bootstrap support for H3GWJ4 as seed ortholog is 100%.

Group of orthologs #1102. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.ramorum:197

A8I517              	100.00%		H3HD82              	100.00%
Bootstrap support for A8I517 as seed ortholog is 100%.
Bootstrap support for H3HD82 as seed ortholog is 100%.

Group of orthologs #1103. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.ramorum:196

A8HTE5              	100.00%		H3GG74              	100.00%
Bootstrap support for A8HTE5 as seed ortholog is 100%.
Bootstrap support for H3GG74 as seed ortholog is 100%.

Group of orthologs #1104. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.ramorum:196

A8ITT6              	100.00%		H3G7J8              	100.00%
Bootstrap support for A8ITT6 as seed ortholog is 100%.
Bootstrap support for H3G7J8 as seed ortholog is 100%.

Group of orthologs #1105. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 P.ramorum:28

A8JII0              	100.00%		H3G625              	100.00%
Bootstrap support for A8JII0 as seed ortholog is 48%.
Alternative seed ortholog is A8I5U8 (2 bits away from this cluster)
Bootstrap support for H3G625 as seed ortholog is 79%.

Group of orthologs #1106. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.ramorum:196

A8I678              	100.00%		H3HB20              	100.00%
Bootstrap support for A8I678 as seed ortholog is 100%.
Bootstrap support for H3HB20 as seed ortholog is 100%.

Group of orthologs #1107. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:195

A8J6L9              	100.00%		H3GL32              	100.00%
A8IRN5              	22.49%		
A8IEX3              	21.09%		
Bootstrap support for A8J6L9 as seed ortholog is 100%.
Bootstrap support for H3GL32 as seed ortholog is 100%.

Group of orthologs #1108. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:195

A8HP11              	100.00%		H3G701              	100.00%
                    	       		H3GSV1              	79.22%
Bootstrap support for A8HP11 as seed ortholog is 100%.
Bootstrap support for H3G701 as seed ortholog is 100%.

Group of orthologs #1109. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:9

A8J308              	100.00%		H3G8L1              	100.00%
                    	       		H3GAR1              	48.61%
Bootstrap support for A8J308 as seed ortholog is 100%.
Bootstrap support for H3G8L1 as seed ortholog is 60%.
Alternative seed ortholog is H3G7G2 (9 bits away from this cluster)

Group of orthologs #1110. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:195

A8IRU1              	100.00%		H3GJ62              	100.00%
                    	       		H3GJ63              	100.00%
Bootstrap support for A8IRU1 as seed ortholog is 100%.
Bootstrap support for H3GJ62 as seed ortholog is 100%.
Bootstrap support for H3GJ63 as seed ortholog is 100%.

Group of orthologs #1111. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:195

A8JB37              	100.00%		H3HBU7              	100.00%
                    	       		H3GWF5              	6.34%
Bootstrap support for A8JB37 as seed ortholog is 100%.
Bootstrap support for H3HBU7 as seed ortholog is 100%.

Group of orthologs #1112. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:84

A8I6W1              	100.00%		H3GNQ4              	100.00%
Bootstrap support for A8I6W1 as seed ortholog is 97%.
Bootstrap support for H3GNQ4 as seed ortholog is 99%.

Group of orthologs #1113. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:77

A8J216              	100.00%		H3GU33              	100.00%
Bootstrap support for A8J216 as seed ortholog is 99%.
Bootstrap support for H3GU33 as seed ortholog is 98%.

Group of orthologs #1114. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:129

A8JDZ2              	100.00%		H3GKK6              	100.00%
Bootstrap support for A8JDZ2 as seed ortholog is 99%.
Bootstrap support for H3GKK6 as seed ortholog is 100%.

Group of orthologs #1115. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.ramorum:195

Q2XQY7              	100.00%		H3HAT8              	100.00%
Bootstrap support for Q2XQY7 as seed ortholog is 100%.
Bootstrap support for H3HAT8 as seed ortholog is 100%.

Group of orthologs #1116. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.ramorum:194

A8HRZ9              	100.00%		H3G6D5              	100.00%
Bootstrap support for A8HRZ9 as seed ortholog is 100%.
Bootstrap support for H3G6D5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8I4H4              	100.00%		H3G8A3              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for H3G8A3 as seed ortholog is 100%.

Group of orthologs #1118. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8HY98              	100.00%		H3GHT1              	100.00%
Bootstrap support for A8HY98 as seed ortholog is 100%.
Bootstrap support for H3GHT1 as seed ortholog is 100%.

Group of orthologs #1119. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8IWB5              	100.00%		H3GAC4              	100.00%
Bootstrap support for A8IWB5 as seed ortholog is 100%.
Bootstrap support for H3GAC4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8IYQ8              	100.00%		H3GAV6              	100.00%
Bootstrap support for A8IYQ8 as seed ortholog is 100%.
Bootstrap support for H3GAV6 as seed ortholog is 100%.

Group of orthologs #1121. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8J3R6              	100.00%		H3G8M6              	100.00%
Bootstrap support for A8J3R6 as seed ortholog is 100%.
Bootstrap support for H3G8M6 as seed ortholog is 100%.

Group of orthologs #1122. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8HWS3              	100.00%		H3GV42              	100.00%
Bootstrap support for A8HWS3 as seed ortholog is 100%.
Bootstrap support for H3GV42 as seed ortholog is 100%.

Group of orthologs #1123. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.ramorum:194

A8J1W0              	100.00%		H3HDF6              	100.00%
Bootstrap support for A8J1W0 as seed ortholog is 100%.
Bootstrap support for H3HDF6 as seed ortholog is 100%.

Group of orthologs #1124. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8ITV6              	100.00%		H3G6G3              	100.00%
                    	       		H3G7P1              	33.22%
Bootstrap support for A8ITV6 as seed ortholog is 100%.
Bootstrap support for H3G6G3 as seed ortholog is 100%.

Group of orthologs #1125. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8J588              	100.00%		H3G7K5              	100.00%
Bootstrap support for A8J588 as seed ortholog is 100%.
Bootstrap support for H3G7K5 as seed ortholog is 100%.

Group of orthologs #1126. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8HSJ9              	100.00%		H3GWS0              	100.00%
Bootstrap support for A8HSJ9 as seed ortholog is 100%.
Bootstrap support for H3GWS0 as seed ortholog is 100%.

Group of orthologs #1127. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8HQ97              	100.00%		H3GYG9              	100.00%
Bootstrap support for A8HQ97 as seed ortholog is 100%.
Bootstrap support for H3GYG9 as seed ortholog is 100%.

Group of orthologs #1128. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8I335              	100.00%		H3GWS9              	100.00%
Bootstrap support for A8I335 as seed ortholog is 100%.
Bootstrap support for H3GWS9 as seed ortholog is 100%.

Group of orthologs #1129. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:193

A8JDV9              	100.00%		H3G8T8              	100.00%
Bootstrap support for A8JDV9 as seed ortholog is 97%.
Bootstrap support for H3G8T8 as seed ortholog is 100%.

Group of orthologs #1130. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8ISB8              	100.00%		H3GVH6              	100.00%
Bootstrap support for A8ISB8 as seed ortholog is 100%.
Bootstrap support for H3GVH6 as seed ortholog is 100%.

Group of orthologs #1131. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.ramorum:193

A8JH26              	100.00%		H3GCM0              	100.00%
Bootstrap support for A8JH26 as seed ortholog is 100%.
Bootstrap support for H3GCM0 as seed ortholog is 100%.

Group of orthologs #1132. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:192

A8HSB5              	100.00%		H3GAL2              	100.00%
A8IR81              	100.00%		H3GAL3              	100.00%
Q42680              	100.00%		
A8HWF6              	100.00%		
A8HWM8              	100.00%		
A8JJE0              	70.00%		
Bootstrap support for A8HSB5 as seed ortholog is 100%.
Bootstrap support for A8IR81 as seed ortholog is 100%.
Bootstrap support for Q42680 as seed ortholog is 100%.
Bootstrap support for A8HWF6 as seed ortholog is 100%.
Bootstrap support for A8HWM8 as seed ortholog is 100%.
Bootstrap support for H3GAL2 as seed ortholog is 100%.
Bootstrap support for H3GAL3 as seed ortholog is 100%.

Group of orthologs #1133. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.ramorum:192

A8J577              	100.00%		H3GEK1              	100.00%
                    	       		H3GEK3              	95.95%
Bootstrap support for A8J577 as seed ortholog is 100%.
Bootstrap support for H3GEK1 as seed ortholog is 100%.

Group of orthologs #1134. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.ramorum:192

A8IUV7              	100.00%		H3G8S1              	100.00%
Bootstrap support for A8IUV7 as seed ortholog is 100%.
Bootstrap support for H3G8S1 as seed ortholog is 100%.

Group of orthologs #1135. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.ramorum:192

A8J7M2              	100.00%		H3G6N6              	100.00%
Bootstrap support for A8J7M2 as seed ortholog is 100%.
Bootstrap support for H3G6N6 as seed ortholog is 100%.

Group of orthologs #1136. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:191

A8HP28              	100.00%		H3GAR3              	100.00%
Bootstrap support for A8HP28 as seed ortholog is 100%.
Bootstrap support for H3GAR3 as seed ortholog is 100%.

Group of orthologs #1137. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:191

A8IA67              	100.00%		H3G5V4              	100.00%
Bootstrap support for A8IA67 as seed ortholog is 100%.
Bootstrap support for H3G5V4 as seed ortholog is 100%.

Group of orthologs #1138. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:191

A8IF73              	100.00%		H3G8A6              	100.00%
Bootstrap support for A8IF73 as seed ortholog is 100%.
Bootstrap support for H3G8A6 as seed ortholog is 100%.

Group of orthologs #1139. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:137

A8I303              	100.00%		H3GFI2              	100.00%
Bootstrap support for A8I303 as seed ortholog is 99%.
Bootstrap support for H3GFI2 as seed ortholog is 100%.

Group of orthologs #1140. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:191

A8IRR6              	100.00%		H3G8P7              	100.00%
Bootstrap support for A8IRR6 as seed ortholog is 100%.
Bootstrap support for H3G8P7 as seed ortholog is 100%.

Group of orthologs #1141. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:191

A8IV15              	100.00%		H3G702              	100.00%
Bootstrap support for A8IV15 as seed ortholog is 100%.
Bootstrap support for H3G702 as seed ortholog is 100%.

Group of orthologs #1142. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:191

A8HQN4              	100.00%		H3GNC9              	100.00%
Bootstrap support for A8HQN4 as seed ortholog is 100%.
Bootstrap support for H3GNC9 as seed ortholog is 100%.

Group of orthologs #1143. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:127

A8J0P9              	100.00%		H3G5G1              	100.00%
Bootstrap support for A8J0P9 as seed ortholog is 96%.
Bootstrap support for H3G5G1 as seed ortholog is 100%.

Group of orthologs #1144. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.ramorum:119

A8IX31              	100.00%		H3GVN3              	100.00%
Bootstrap support for A8IX31 as seed ortholog is 100%.
Bootstrap support for H3GVN3 as seed ortholog is 99%.

Group of orthologs #1145. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:191

A8J5A3              	100.00%		H3H5A8              	100.00%
Bootstrap support for A8J5A3 as seed ortholog is 98%.
Bootstrap support for H3H5A8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:190

A8J7D5              	100.00%		H3H080              	100.00%
                    	       		H3H829              	99.40%
Bootstrap support for A8J7D5 as seed ortholog is 99%.
Bootstrap support for H3H080 as seed ortholog is 100%.

Group of orthologs #1147. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.ramorum:190

A8IYC7              	100.00%		H3G9A6              	100.00%
Bootstrap support for A8IYC7 as seed ortholog is 100%.
Bootstrap support for H3G9A6 as seed ortholog is 100%.

Group of orthologs #1148. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:120

A8JC37              	100.00%		H3GBG8              	100.00%
Bootstrap support for A8JC37 as seed ortholog is 98%.
Bootstrap support for H3GBG8 as seed ortholog is 99%.

Group of orthologs #1149. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.ramorum:190

A8IH47              	100.00%		H3GWV6              	100.00%
Bootstrap support for A8IH47 as seed ortholog is 100%.
Bootstrap support for H3GWV6 as seed ortholog is 100%.

Group of orthologs #1150. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:41

A8J7A7              	100.00%		H3G613              	100.00%
A8J947              	22.37%		
Bootstrap support for A8J7A7 as seed ortholog is 96%.
Bootstrap support for H3G613 as seed ortholog is 93%.

Group of orthologs #1151. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:189

A8HV47              	100.00%		H3G7Z9              	100.00%
Bootstrap support for A8HV47 as seed ortholog is 100%.
Bootstrap support for H3G7Z9 as seed ortholog is 100%.

Group of orthologs #1152. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:81

A8HX77              	100.00%		H3GLF1              	100.00%
Bootstrap support for A8HX77 as seed ortholog is 100%.
Bootstrap support for H3GLF1 as seed ortholog is 99%.

Group of orthologs #1153. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:189

A8IQT2              	100.00%		H3GBY4              	100.00%
Bootstrap support for A8IQT2 as seed ortholog is 100%.
Bootstrap support for H3GBY4 as seed ortholog is 100%.

Group of orthologs #1154. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:189

A8J597              	100.00%		H3G9L4              	100.00%
Bootstrap support for A8J597 as seed ortholog is 100%.
Bootstrap support for H3G9L4 as seed ortholog is 100%.

Group of orthologs #1155. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:189

A8JAQ9              	100.00%		H3G8H6              	100.00%
Bootstrap support for A8JAQ9 as seed ortholog is 99%.
Bootstrap support for H3G8H6 as seed ortholog is 100%.

Group of orthologs #1156. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.ramorum:189

A8JDP4              	100.00%		H3HCD6              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for H3HCD6 as seed ortholog is 100%.

Group of orthologs #1157. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.ramorum:188

A8IWL0              	100.00%		H3H379              	100.00%
                    	       		H3G567              	45.25%
Bootstrap support for A8IWL0 as seed ortholog is 100%.
Bootstrap support for H3H379 as seed ortholog is 100%.

Group of orthologs #1158. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.ramorum:188

A8HP81              	100.00%		H3GA21              	100.00%
Bootstrap support for A8HP81 as seed ortholog is 79%.
Bootstrap support for H3GA21 as seed ortholog is 100%.

Group of orthologs #1159. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:188

A8I1Y7              	100.00%		H3GNV8              	100.00%
Bootstrap support for A8I1Y7 as seed ortholog is 99%.
Bootstrap support for H3GNV8 as seed ortholog is 100%.

Group of orthologs #1160. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.ramorum:188

A8HW92              	100.00%		H3GS44              	100.00%
Bootstrap support for A8HW92 as seed ortholog is 100%.
Bootstrap support for H3GS44 as seed ortholog is 100%.

Group of orthologs #1161. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.ramorum:128

A8J8Y6              	100.00%		H3GD20              	100.00%
Bootstrap support for A8J8Y6 as seed ortholog is 100%.
Bootstrap support for H3GD20 as seed ortholog is 99%.

Group of orthologs #1162. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.ramorum:48

A8J8V0              	100.00%		H3GN73              	100.00%
                    	       		H3GN83              	54.21%
                    	       		H3GN80              	39.37%
Bootstrap support for A8J8V0 as seed ortholog is 89%.
Bootstrap support for H3GN73 as seed ortholog is 91%.

Group of orthologs #1163. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:187

A8IZ70              	100.00%		H3G8G5              	100.00%
                    	       		H3G8G4              	29.31%
Bootstrap support for A8IZ70 as seed ortholog is 96%.
Bootstrap support for H3G8G5 as seed ortholog is 100%.

Group of orthologs #1164. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:187

A8HWK8              	100.00%		H3GV35              	100.00%
Bootstrap support for A8HWK8 as seed ortholog is 100%.
Bootstrap support for H3GV35 as seed ortholog is 100%.

Group of orthologs #1165. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:11

A8I4X2              	100.00%		H3GW67              	100.00%
Bootstrap support for A8I4X2 as seed ortholog is 100%.
Bootstrap support for H3GW67 as seed ortholog is 57%.
Alternative seed ortholog is H3GBF4 (11 bits away from this cluster)

Group of orthologs #1166. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:187

A8HN50              	100.00%		H3H534              	100.00%
Bootstrap support for A8HN50 as seed ortholog is 100%.
Bootstrap support for H3H534 as seed ortholog is 100%.

Group of orthologs #1167. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:187

A8J507              	100.00%		H3GM33              	100.00%
Bootstrap support for A8J507 as seed ortholog is 100%.
Bootstrap support for H3GM33 as seed ortholog is 100%.

Group of orthologs #1168. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.ramorum:187

A8JER8              	100.00%		H3GFD8              	100.00%
Bootstrap support for A8JER8 as seed ortholog is 100%.
Bootstrap support for H3GFD8 as seed ortholog is 100%.

Group of orthologs #1169. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.ramorum:186

A8HVE0              	100.00%		H3GLE7              	100.00%
A8I683              	5.88%		
Bootstrap support for A8HVE0 as seed ortholog is 100%.
Bootstrap support for H3GLE7 as seed ortholog is 100%.

Group of orthologs #1170. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.ramorum:186

A8JEC1              	100.00%		H3GJV8              	100.00%
                    	       		H3GJV7              	84.03%
Bootstrap support for A8JEC1 as seed ortholog is 100%.
Bootstrap support for H3GJV8 as seed ortholog is 100%.

Group of orthologs #1171. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.ramorum:186

A8J7L7              	100.00%		H3GA08              	100.00%
Bootstrap support for A8J7L7 as seed ortholog is 100%.
Bootstrap support for H3GA08 as seed ortholog is 100%.

Group of orthologs #1172. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 P.ramorum:57

A8J587              	100.00%		H3GRW8              	100.00%
Bootstrap support for A8J587 as seed ortholog is 73%.
Alternative seed ortholog is A8JBW4 (21 bits away from this cluster)
Bootstrap support for H3GRW8 as seed ortholog is 94%.

Group of orthologs #1173. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 P.ramorum:185

A8IYI0              	100.00%		H3H542              	100.00%
                    	       		H3H433              	46.27%
                    	       		H3GZW0              	33.51%
                    	       		H3HA38              	14.18%
Bootstrap support for A8IYI0 as seed ortholog is 61%.
Alternative seed ortholog is A8I9H8 (23 bits away from this cluster)
Bootstrap support for H3H542 as seed ortholog is 100%.

Group of orthologs #1174. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:185

A8J3Y7              	100.00%		H3GV26              	100.00%
A8J989              	8.79%		
Bootstrap support for A8J3Y7 as seed ortholog is 95%.
Bootstrap support for H3GV26 as seed ortholog is 100%.

Group of orthologs #1175. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.ramorum:185

A8I3E7              	100.00%		H3H3F7              	100.00%
Bootstrap support for A8I3E7 as seed ortholog is 100%.
Bootstrap support for H3H3F7 as seed ortholog is 100%.

Group of orthologs #1176. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.ramorum:138

A8IYP2              	100.00%		H3GVF5              	100.00%
Bootstrap support for A8IYP2 as seed ortholog is 100%.
Bootstrap support for H3GVF5 as seed ortholog is 100%.

Group of orthologs #1177. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.ramorum:185

A8J6B1              	100.00%		H3GWG2              	100.00%
Bootstrap support for A8J6B1 as seed ortholog is 100%.
Bootstrap support for H3GWG2 as seed ortholog is 100%.

Group of orthologs #1178. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.ramorum:46

A8IFI0              	100.00%		H3HC15              	100.00%
Bootstrap support for A8IFI0 as seed ortholog is 93%.
Bootstrap support for H3HC15 as seed ortholog is 89%.

Group of orthologs #1179. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.ramorum:185

Q6S7R7              	100.00%		H3GWK8              	100.00%
Bootstrap support for Q6S7R7 as seed ortholog is 93%.
Bootstrap support for H3GWK8 as seed ortholog is 100%.

Group of orthologs #1180. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.ramorum:184

A8I243              	100.00%		H3GCH0              	100.00%
Bootstrap support for A8I243 as seed ortholog is 100%.
Bootstrap support for H3GCH0 as seed ortholog is 100%.

Group of orthologs #1181. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:183

A8JH33              	100.00%		H3H1Q6              	100.00%
A8IDD2              	100.00%		H3H0N0              	100.00%
A8IDC5              	85.88%		H3GUF2              	13.79%
A8JH34              	76.94%		
Bootstrap support for A8JH33 as seed ortholog is 100%.
Bootstrap support for A8IDD2 as seed ortholog is 100%.
Bootstrap support for H3H1Q6 as seed ortholog is 100%.
Bootstrap support for H3H0N0 as seed ortholog is 100%.

Group of orthologs #1182. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:183

A8HP90              	100.00%		H3G8Y2              	100.00%
                    	       		H3H2X8              	45.34%
Bootstrap support for A8HP90 as seed ortholog is 100%.
Bootstrap support for H3G8Y2 as seed ortholog is 100%.

Group of orthologs #1183. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:183

A8IWU0              	100.00%		H3GAD8              	100.00%
Bootstrap support for A8IWU0 as seed ortholog is 100%.
Bootstrap support for H3GAD8 as seed ortholog is 100%.

Group of orthologs #1184. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:183

A8IC07              	100.00%		H3GZX4              	100.00%
Bootstrap support for A8IC07 as seed ortholog is 100%.
Bootstrap support for H3GZX4 as seed ortholog is 100%.

Group of orthologs #1185. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:183

A8IZT2              	100.00%		H3GZX3              	100.00%
Bootstrap support for A8IZT2 as seed ortholog is 98%.
Bootstrap support for H3GZX3 as seed ortholog is 100%.

Group of orthologs #1186. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.ramorum:183

A8JFW5              	100.00%		H3GRU2              	100.00%
Bootstrap support for A8JFW5 as seed ortholog is 100%.
Bootstrap support for H3GRU2 as seed ortholog is 100%.

Group of orthologs #1187. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:45

A8JBP5              	100.00%		H3GXC9              	100.00%
Bootstrap support for A8JBP5 as seed ortholog is 98%.
Bootstrap support for H3GXC9 as seed ortholog is 87%.

Group of orthologs #1188. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:88

A8I762              	100.00%		H3GHS0              	100.00%
Bootstrap support for A8I762 as seed ortholog is 99%.
Bootstrap support for H3GHS0 as seed ortholog is 99%.

Group of orthologs #1189. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.ramorum:182

Q84TR5              	100.00%		H3GGV9              	100.00%
Bootstrap support for Q84TR5 as seed ortholog is 100%.
Bootstrap support for H3GGV9 as seed ortholog is 100%.

Group of orthologs #1190. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:84

A8JGJ7              	100.00%		H3GSC6              	100.00%
Bootstrap support for A8JGJ7 as seed ortholog is 98%.
Bootstrap support for H3GSC6 as seed ortholog is 98%.

Group of orthologs #1191. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:132

A8JFG1              	100.00%		H3GEM1              	100.00%
A8HTT9              	25.91%		
Bootstrap support for A8JFG1 as seed ortholog is 99%.
Bootstrap support for H3GEM1 as seed ortholog is 99%.

Group of orthologs #1192. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:181

A8J2G4              	100.00%		H3GAD2              	100.00%
Bootstrap support for A8J2G4 as seed ortholog is 100%.
Bootstrap support for H3GAD2 as seed ortholog is 100%.

Group of orthologs #1193. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:181

A8HQE3              	100.00%		H3GY61              	100.00%
Bootstrap support for A8HQE3 as seed ortholog is 100%.
Bootstrap support for H3GY61 as seed ortholog is 100%.

Group of orthologs #1194. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:181

A8J8M9              	100.00%		H3GAS8              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 100%.
Bootstrap support for H3GAS8 as seed ortholog is 100%.

Group of orthologs #1195. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:78

A8JBG7              	100.00%		H3G8V4              	100.00%
Bootstrap support for A8JBG7 as seed ortholog is 100%.
Bootstrap support for H3G8V4 as seed ortholog is 99%.

Group of orthologs #1196. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:82

A8HQU6              	100.00%		H3HED1              	100.00%
Bootstrap support for A8HQU6 as seed ortholog is 100%.
Bootstrap support for H3HED1 as seed ortholog is 98%.

Group of orthologs #1197. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.ramorum:119

A8IW99              	100.00%		H3H1D5              	100.00%
Bootstrap support for A8IW99 as seed ortholog is 100%.
Bootstrap support for H3H1D5 as seed ortholog is 100%.

Group of orthologs #1198. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:180

A8IN33              	100.00%		H3G792              	100.00%
                    	       		H3G5F4              	92.22%
Bootstrap support for A8IN33 as seed ortholog is 99%.
Bootstrap support for H3G792 as seed ortholog is 100%.

Group of orthologs #1199. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:180

A8HQ78              	100.00%		H3GLK4              	100.00%
                    	       		H3GLK2              	36.89%
Bootstrap support for A8HQ78 as seed ortholog is 100%.
Bootstrap support for H3GLK4 as seed ortholog is 100%.

Group of orthologs #1200. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:180

A8HS59              	100.00%		H3G8X7              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for H3G8X7 as seed ortholog is 100%.

Group of orthologs #1201. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:180

A8J3Q6              	100.00%		H3G5L7              	100.00%
Bootstrap support for A8J3Q6 as seed ortholog is 100%.
Bootstrap support for H3G5L7 as seed ortholog is 100%.

Group of orthologs #1202. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:104

A8J856              	100.00%		H3G719              	100.00%
Bootstrap support for A8J856 as seed ortholog is 99%.
Bootstrap support for H3G719 as seed ortholog is 100%.

Group of orthologs #1203. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:86

A8J7C2              	100.00%		H3GVM4              	100.00%
Bootstrap support for A8J7C2 as seed ortholog is 100%.
Bootstrap support for H3GVM4 as seed ortholog is 97%.

Group of orthologs #1204. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.ramorum:50

A8JGE3              	100.00%		H3GPL9              	100.00%
Bootstrap support for A8JGE3 as seed ortholog is 84%.
Bootstrap support for H3GPL9 as seed ortholog is 68%.
Alternative seed ortholog is H3HAS8 (50 bits away from this cluster)

Group of orthologs #1205. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.ramorum:180

A8JCZ5              	100.00%		H3GTE2              	100.00%
Bootstrap support for A8JCZ5 as seed ortholog is 100%.
Bootstrap support for H3GTE2 as seed ortholog is 100%.

Group of orthologs #1206. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:179

A8J4I9              	100.00%		H3GG51              	100.00%
                    	       		H3HAX0              	74.71%
                    	       		H3GCF2              	45.40%
                    	       		H3GY04              	42.53%
                    	       		H3GCF3              	22.03%
                    	       		H3GCF8              	21.07%
Bootstrap support for A8J4I9 as seed ortholog is 100%.
Bootstrap support for H3GG51 as seed ortholog is 100%.

Group of orthologs #1207. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.ramorum:179

A8IF69              	100.00%		H3GCK9              	100.00%
                    	       		H3HAZ0              	59.97%
Bootstrap support for A8IF69 as seed ortholog is 93%.
Bootstrap support for H3GCK9 as seed ortholog is 100%.

Group of orthologs #1208. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:179

A8I297              	100.00%		H3G9M1              	100.00%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for H3G9M1 as seed ortholog is 100%.

Group of orthologs #1209. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:179

A8J304              	100.00%		H3G610              	100.00%
Bootstrap support for A8J304 as seed ortholog is 100%.
Bootstrap support for H3G610 as seed ortholog is 100%.

Group of orthologs #1210. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:81

A8J0T6              	100.00%		H3G915              	100.00%
Bootstrap support for A8J0T6 as seed ortholog is 99%.
Bootstrap support for H3G915 as seed ortholog is 99%.

Group of orthologs #1211. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:123

A8IK60              	100.00%		H3GK11              	100.00%
Bootstrap support for A8IK60 as seed ortholog is 99%.
Bootstrap support for H3GK11 as seed ortholog is 100%.

Group of orthologs #1212. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:179

A8J888              	100.00%		H3G561              	100.00%
Bootstrap support for A8J888 as seed ortholog is 100%.
Bootstrap support for H3G561 as seed ortholog is 100%.

Group of orthologs #1213. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:179

A8IZD4              	100.00%		H3GS88              	100.00%
Bootstrap support for A8IZD4 as seed ortholog is 100%.
Bootstrap support for H3GS88 as seed ortholog is 100%.

Group of orthologs #1214. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.ramorum:179

A8J1L5              	100.00%		H3GUR6              	100.00%
Bootstrap support for A8J1L5 as seed ortholog is 100%.
Bootstrap support for H3GUR6 as seed ortholog is 100%.

Group of orthologs #1215. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:178

A8HNP9              	100.00%		H3GI14              	100.00%
Bootstrap support for A8HNP9 as seed ortholog is 100%.
Bootstrap support for H3GI14 as seed ortholog is 100%.

Group of orthologs #1216. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:178

A8IRC0              	100.00%		H3GD54              	100.00%
Bootstrap support for A8IRC0 as seed ortholog is 100%.
Bootstrap support for H3GD54 as seed ortholog is 100%.

Group of orthologs #1217. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:178

A8JCS0              	100.00%		H3G7X6              	100.00%
Bootstrap support for A8JCS0 as seed ortholog is 100%.
Bootstrap support for H3G7X6 as seed ortholog is 100%.

Group of orthologs #1218. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:178

A8JH29              	100.00%		H3G7K0              	100.00%
Bootstrap support for A8JH29 as seed ortholog is 100%.
Bootstrap support for H3G7K0 as seed ortholog is 100%.

Group of orthologs #1219. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:178

A8J239              	100.00%		H3GQX2              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for H3GQX2 as seed ortholog is 100%.

Group of orthologs #1220. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.ramorum:178

A8ITA7              	100.00%		H3H0Y8              	100.00%
Bootstrap support for A8ITA7 as seed ortholog is 100%.
Bootstrap support for H3H0Y8 as seed ortholog is 100%.

Group of orthologs #1221. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 P.ramorum:177

A8J203              	100.00%		H3GEZ1              	100.00%
                    	       		H3GEY2              	30.60%
Bootstrap support for A8J203 as seed ortholog is 66%.
Alternative seed ortholog is A8IVQ5 (13 bits away from this cluster)
Bootstrap support for H3GEZ1 as seed ortholog is 100%.

Group of orthologs #1222. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:47

A8J2A5              	100.00%		H3GCD2              	100.00%
Bootstrap support for A8J2A5 as seed ortholog is 97%.
Bootstrap support for H3GCD2 as seed ortholog is 90%.

Group of orthologs #1223. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:177

A8JA29              	100.00%		H3G704              	100.00%
Bootstrap support for A8JA29 as seed ortholog is 88%.
Bootstrap support for H3G704 as seed ortholog is 100%.

Group of orthologs #1224. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:177

A8JBR3              	100.00%		H3G6V4              	100.00%
Bootstrap support for A8JBR3 as seed ortholog is 100%.
Bootstrap support for H3G6V4 as seed ortholog is 100%.

Group of orthologs #1225. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.ramorum:177

A8JG06              	100.00%		H3GZZ0              	100.00%
Bootstrap support for A8JG06 as seed ortholog is 100%.
Bootstrap support for H3GZZ0 as seed ortholog is 100%.

Group of orthologs #1226. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.ramorum:176

A8IMT5              	100.00%		H3GGH2              	100.00%
Bootstrap support for A8IMT5 as seed ortholog is 100%.
Bootstrap support for H3GGH2 as seed ortholog is 100%.

Group of orthologs #1227. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:176

A8JDN2              	100.00%		H3GIP3              	100.00%
Bootstrap support for A8JDN2 as seed ortholog is 99%.
Bootstrap support for H3GIP3 as seed ortholog is 100%.

Group of orthologs #1228. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:70

A8I960              	100.00%		H3HDI5              	100.00%
Bootstrap support for A8I960 as seed ortholog is 92%.
Bootstrap support for H3HDI5 as seed ortholog is 97%.

Group of orthologs #1229. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.ramorum:176

A8JBX2              	100.00%		H3GSE5              	100.00%
Bootstrap support for A8JBX2 as seed ortholog is 85%.
Bootstrap support for H3GSE5 as seed ortholog is 100%.

Group of orthologs #1230. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.ramorum:176

A8JGW5              	100.00%		H3GNB4              	100.00%
Bootstrap support for A8JGW5 as seed ortholog is 100%.
Bootstrap support for H3GNB4 as seed ortholog is 100%.

Group of orthologs #1231. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:175

A8I0A3              	100.00%		H3G7K1              	100.00%
                    	       		H3GWM2              	51.71%
Bootstrap support for A8I0A3 as seed ortholog is 100%.
Bootstrap support for H3G7K1 as seed ortholog is 100%.

Group of orthologs #1232. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:33

A8HNC9              	100.00%		H3H030              	100.00%
A8J0Y4              	5.78%		
Bootstrap support for A8HNC9 as seed ortholog is 78%.
Bootstrap support for H3H030 as seed ortholog is 90%.

Group of orthologs #1233. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8HVK4              	100.00%		H3G8T9              	100.00%
Bootstrap support for A8HVK4 as seed ortholog is 100%.
Bootstrap support for H3G8T9 as seed ortholog is 100%.

Group of orthologs #1234. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8J801              	100.00%		H3G5A2              	100.00%
Bootstrap support for A8J801 as seed ortholog is 100%.
Bootstrap support for H3G5A2 as seed ortholog is 100%.

Group of orthologs #1235. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8ISK2              	100.00%		H3GI13              	100.00%
Bootstrap support for A8ISK2 as seed ortholog is 100%.
Bootstrap support for H3GI13 as seed ortholog is 100%.

Group of orthologs #1236. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8JBE3              	100.00%		H3G7B0              	100.00%
Bootstrap support for A8JBE3 as seed ortholog is 100%.
Bootstrap support for H3G7B0 as seed ortholog is 100%.

Group of orthologs #1237. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8J6G4              	100.00%		H3GED3              	100.00%
Bootstrap support for A8J6G4 as seed ortholog is 100%.
Bootstrap support for H3GED3 as seed ortholog is 100%.

Group of orthologs #1238. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8JDV2              	100.00%		H3G7X3              	100.00%
Bootstrap support for A8JDV2 as seed ortholog is 100%.
Bootstrap support for H3G7X3 as seed ortholog is 100%.

Group of orthologs #1239. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:91

A8HT40              	100.00%		H3HB87              	100.00%
Bootstrap support for A8HT40 as seed ortholog is 100%.
Bootstrap support for H3HB87 as seed ortholog is 92%.

Group of orthologs #1240. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:4

A8J7X5              	100.00%		H3GR73              	100.00%
Bootstrap support for A8J7X5 as seed ortholog is 99%.
Bootstrap support for H3GR73 as seed ortholog is 54%.
Alternative seed ortholog is H3G8R0 (4 bits away from this cluster)

Group of orthologs #1241. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.ramorum:175

A8JAI8              	100.00%		H3GVF3              	100.00%
Bootstrap support for A8JAI8 as seed ortholog is 100%.
Bootstrap support for H3GVF3 as seed ortholog is 100%.

Group of orthologs #1242. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.ramorum:174

A8JGY2              	100.00%		H3GE88              	100.00%
                    	       		H3G9T4              	7.87%
Bootstrap support for A8JGY2 as seed ortholog is 100%.
Bootstrap support for H3GE88 as seed ortholog is 100%.

Group of orthologs #1243. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.ramorum:174

A8JED2              	100.00%		H3H3X5              	100.00%
                    	       		H3GC76              	24.59%
Bootstrap support for A8JED2 as seed ortholog is 100%.
Bootstrap support for H3H3X5 as seed ortholog is 100%.

Group of orthologs #1244. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.ramorum:174

A8HPS1              	100.00%		H3GJI2              	100.00%
Bootstrap support for A8HPS1 as seed ortholog is 100%.
Bootstrap support for H3GJI2 as seed ortholog is 100%.

Group of orthologs #1245. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.ramorum:174

A8JFX7              	100.00%		H3GA80              	100.00%
Bootstrap support for A8JFX7 as seed ortholog is 100%.
Bootstrap support for H3GA80 as seed ortholog is 100%.

Group of orthologs #1246. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:173

A7UCH9              	100.00%		H3GC28              	100.00%
A8JB12              	39.00%		
Bootstrap support for A7UCH9 as seed ortholog is 99%.
Bootstrap support for H3GC28 as seed ortholog is 100%.

Group of orthologs #1247. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.ramorum:36

A8HQM1              	100.00%		H3GWN5              	100.00%
Bootstrap support for A8HQM1 as seed ortholog is 53%.
Alternative seed ortholog is A8HXL0 (5 bits away from this cluster)
Bootstrap support for H3GWN5 as seed ortholog is 86%.

Group of orthologs #1248. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.ramorum:173

A8ITU7              	100.00%		H3GK34              	100.00%
Bootstrap support for A8ITU7 as seed ortholog is 100%.
Bootstrap support for H3GK34 as seed ortholog is 100%.

Group of orthologs #1249. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.ramorum:173

A8HUC0              	100.00%		H3H369              	100.00%
Bootstrap support for A8HUC0 as seed ortholog is 100%.
Bootstrap support for H3H369 as seed ortholog is 100%.

Group of orthologs #1250. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.ramorum:173

A8JG85              	100.00%		H3G8U9              	100.00%
Bootstrap support for A8JG85 as seed ortholog is 100%.
Bootstrap support for H3G8U9 as seed ortholog is 100%.

Group of orthologs #1251. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.ramorum:173

A8IZN9              	100.00%		H3H0I0              	100.00%
Bootstrap support for A8IZN9 as seed ortholog is 100%.
Bootstrap support for H3H0I0 as seed ortholog is 100%.

Group of orthologs #1252. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:93

A8IQ65              	100.00%		H3GMA7              	100.00%
                    	       		H3GGY9              	48.07%
                    	       		H3GM42              	7.94%
Bootstrap support for A8IQ65 as seed ortholog is 99%.
Bootstrap support for H3GMA7 as seed ortholog is 99%.

Group of orthologs #1253. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:172

A8JAR0              	100.00%		H3G714              	100.00%
A8JAQ8              	48.85%		
Bootstrap support for A8JAR0 as seed ortholog is 98%.
Bootstrap support for H3G714 as seed ortholog is 100%.

Group of orthologs #1254. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:37

A8J5R4              	100.00%		H3GIF5              	100.00%
A8JGA6              	38.13%		
Bootstrap support for A8J5R4 as seed ortholog is 97%.
Bootstrap support for H3GIF5 as seed ortholog is 90%.

Group of orthologs #1255. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.ramorum:172

A8HSS5              	100.00%		H3G9P5              	100.00%
Bootstrap support for A8HSS5 as seed ortholog is 100%.
Bootstrap support for H3G9P5 as seed ortholog is 100%.

Group of orthologs #1256. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.ramorum:172

A8IF01              	100.00%		H3G9D9              	100.00%
Bootstrap support for A8IF01 as seed ortholog is 100%.
Bootstrap support for H3G9D9 as seed ortholog is 100%.

Group of orthologs #1257. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.ramorum:78

A8HNQ6              	100.00%		H3GLC1              	100.00%
Bootstrap support for A8HNQ6 as seed ortholog is 98%.
Bootstrap support for H3GLC1 as seed ortholog is 92%.

Group of orthologs #1258. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.ramorum:172

A8J1Q1              	100.00%		H3G6Z2              	100.00%
Bootstrap support for A8J1Q1 as seed ortholog is 100%.
Bootstrap support for H3G6Z2 as seed ortholog is 100%.

Group of orthologs #1259. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:29

A8IRE4              	100.00%		H3GBR4              	100.00%
A8IL34              	15.64%		
Bootstrap support for A8IRE4 as seed ortholog is 93%.
Bootstrap support for H3GBR4 as seed ortholog is 73%.
Alternative seed ortholog is H3GZ43 (29 bits away from this cluster)

Group of orthologs #1260. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:171

A8JH17              	100.00%		H3HB59              	100.00%
A8HQL6              	8.99%		
Bootstrap support for A8JH17 as seed ortholog is 89%.
Bootstrap support for H3HB59 as seed ortholog is 100%.

Group of orthologs #1261. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.ramorum:171

A8HQW1              	100.00%		H3G840              	100.00%
Bootstrap support for A8HQW1 as seed ortholog is 100%.
Bootstrap support for H3G840 as seed ortholog is 100%.

Group of orthologs #1262. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.ramorum:171

A8I7E4              	100.00%		H3G5K6              	100.00%
Bootstrap support for A8I7E4 as seed ortholog is 100%.
Bootstrap support for H3G5K6 as seed ortholog is 100%.

Group of orthologs #1263. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:69

A8IH35              	100.00%		H3G941              	100.00%
Bootstrap support for A8IH35 as seed ortholog is 99%.
Bootstrap support for H3G941 as seed ortholog is 99%.

Group of orthologs #1264. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.ramorum:171

A8I0V1              	100.00%		H3GVS8              	100.00%
Bootstrap support for A8I0V1 as seed ortholog is 100%.
Bootstrap support for H3GVS8 as seed ortholog is 100%.

Group of orthologs #1265. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.ramorum:171

A8JBX6              	100.00%		H3G8V2              	100.00%
Bootstrap support for A8JBX6 as seed ortholog is 100%.
Bootstrap support for H3G8V2 as seed ortholog is 100%.

Group of orthologs #1266. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.ramorum:171

A8HWY9              	100.00%		H3HB09              	100.00%
Bootstrap support for A8HWY9 as seed ortholog is 100%.
Bootstrap support for H3HB09 as seed ortholog is 100%.

Group of orthologs #1267. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:19

Q84X75              	100.00%		H3GA34              	100.00%
Bootstrap support for Q84X75 as seed ortholog is 97%.
Bootstrap support for H3GA34 as seed ortholog is 63%.
Alternative seed ortholog is H3G7G8 (19 bits away from this cluster)

Group of orthologs #1268. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:170

A8IJR6              	100.00%		H3GA01              	100.00%
A8JJQ6              	98.40%		H3G9Z2              	80.70%
A8IJS4              	96.00%		
A8JDE1              	95.20%		
A8JDH1              	93.60%		
A8HV98              	93.60%		
A8JDC9              	93.60%		
A8IR79              	92.80%		
A8HWX1              	92.00%		
A8JDC0              	92.00%		
A8HWE3              	92.00%		
A8HWX5              	92.00%		
A8JIN6              	92.00%		
A8IR69              	91.20%		
A8HSB2              	81.60%		
A8JJS0              	75.20%		
A8IW75              	57.60%		
A8IW84              	57.60%		
A8JJV5              	26.40%		
A8JJN6              	20.80%		
A8JCT1              	5.60%		
Bootstrap support for A8IJR6 as seed ortholog is 99%.
Bootstrap support for H3GA01 as seed ortholog is 100%.

Group of orthologs #1269. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.ramorum:71

A8IPI7              	100.00%		H3GAI7              	100.00%
                    	       		H3GAI8              	76.35%
                    	       		H3G4Z8              	75.15%
Bootstrap support for A8IPI7 as seed ortholog is 85%.
Bootstrap support for H3GAI7 as seed ortholog is 97%.

Group of orthologs #1270. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.ramorum:170

A8HPD4              	100.00%		H3GZ07              	100.00%
                    	       		H3GZ06              	33.05%
                    	       		H3H1W6              	30.23%
Bootstrap support for A8HPD4 as seed ortholog is 100%.
Bootstrap support for H3GZ07 as seed ortholog is 100%.

Group of orthologs #1271. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.ramorum:170

A8HM72              	100.00%		H3G8C2              	100.00%
Bootstrap support for A8HM72 as seed ortholog is 100%.
Bootstrap support for H3G8C2 as seed ortholog is 100%.

Group of orthologs #1272. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.ramorum:170

A8I0I1              	100.00%		H3GAN1              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for H3GAN1 as seed ortholog is 100%.

Group of orthologs #1273. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:170

A8J3B5              	100.00%		H3G8P3              	100.00%
Bootstrap support for A8J3B5 as seed ortholog is 99%.
Bootstrap support for H3G8P3 as seed ortholog is 100%.

Group of orthologs #1274. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.ramorum:170

A8INB8              	100.00%		H3GL66              	100.00%
Bootstrap support for A8INB8 as seed ortholog is 100%.
Bootstrap support for H3GL66 as seed ortholog is 100%.

Group of orthologs #1275. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:56

A8JBR9              	100.00%		H3G5H0              	100.00%
Bootstrap support for A8JBR9 as seed ortholog is 99%.
Bootstrap support for H3G5H0 as seed ortholog is 99%.

Group of orthologs #1276. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.ramorum:170

A8IXQ9              	100.00%		H3H037              	100.00%
Bootstrap support for A8IXQ9 as seed ortholog is 100%.
Bootstrap support for H3H037 as seed ortholog is 100%.

Group of orthologs #1277. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:39

A8JCP2              	100.00%		H3HDP2              	100.00%
Bootstrap support for A8JCP2 as seed ortholog is 94%.
Bootstrap support for H3HDP2 as seed ortholog is 95%.

Group of orthologs #1278. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.ramorum:169

A8I554              	100.00%		H3GLW4              	100.00%
A8I550              	28.13%		
Bootstrap support for A8I554 as seed ortholog is 100%.
Bootstrap support for H3GLW4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.ramorum:169

A8HXD0              	100.00%		H3GA64              	100.00%
Bootstrap support for A8HXD0 as seed ortholog is 100%.
Bootstrap support for H3GA64 as seed ortholog is 100%.

Group of orthologs #1280. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.ramorum:169

A8J675              	100.00%		H3GJT9              	100.00%
Bootstrap support for A8J675 as seed ortholog is 100%.
Bootstrap support for H3GJT9 as seed ortholog is 100%.

Group of orthologs #1281. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:168

A8IIE6              	100.00%		H3GG19              	100.00%
Bootstrap support for A8IIE6 as seed ortholog is 100%.
Bootstrap support for H3GG19 as seed ortholog is 100%.

Group of orthologs #1282. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:168

A8IJG2              	100.00%		H3GKZ9              	100.00%
Bootstrap support for A8IJG2 as seed ortholog is 100%.
Bootstrap support for H3GKZ9 as seed ortholog is 100%.

Group of orthologs #1283. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:168

A8IVW9              	100.00%		H3GGU4              	100.00%
Bootstrap support for A8IVW9 as seed ortholog is 100%.
Bootstrap support for H3GGU4 as seed ortholog is 100%.

Group of orthologs #1284. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:168

A8J7S5              	100.00%		H3G8S7              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for H3G8S7 as seed ortholog is 100%.

Group of orthologs #1285. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:6

A8HQG8              	100.00%		H3H5Y2              	100.00%
Bootstrap support for A8HQG8 as seed ortholog is 100%.
Bootstrap support for H3H5Y2 as seed ortholog is 46%.
Alternative seed ortholog is H3GCQ6 (6 bits away from this cluster)

Group of orthologs #1286. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:87

A8JH45              	100.00%		H3GAG4              	100.00%
Bootstrap support for A8JH45 as seed ortholog is 100%.
Bootstrap support for H3GAG4 as seed ortholog is 100%.

Group of orthologs #1287. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:168

A8JDW9              	100.00%		H3GDY8              	100.00%
Bootstrap support for A8JDW9 as seed ortholog is 100%.
Bootstrap support for H3GDY8 as seed ortholog is 100%.

Group of orthologs #1288. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.ramorum:168

A8J3H9              	100.00%		H3GNQ3              	100.00%
Bootstrap support for A8J3H9 as seed ortholog is 100%.
Bootstrap support for H3GNQ3 as seed ortholog is 100%.

Group of orthologs #1289. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.ramorum:168

Q8VZX3              	100.00%		H3G8Z6              	100.00%
Bootstrap support for Q8VZX3 as seed ortholog is 100%.
Bootstrap support for H3G8Z6 as seed ortholog is 100%.

Group of orthologs #1290. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.ramorum:167

A8J3B2              	100.00%		H3G9U5              	100.00%
                    	       		H3G9U8              	61.88%
Bootstrap support for A8J3B2 as seed ortholog is 100%.
Bootstrap support for H3G9U5 as seed ortholog is 100%.

Group of orthologs #1291. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.ramorum:167

A8HYN9              	100.00%		H3G5G4              	100.00%
Bootstrap support for A8HYN9 as seed ortholog is 100%.
Bootstrap support for H3G5G4 as seed ortholog is 100%.

Group of orthologs #1292. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.ramorum:167

A8IC72              	100.00%		H3GC89              	100.00%
Bootstrap support for A8IC72 as seed ortholog is 100%.
Bootstrap support for H3GC89 as seed ortholog is 100%.

Group of orthologs #1293. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.ramorum:106

A8IVP3              	100.00%		H3G9F5              	100.00%
Bootstrap support for A8IVP3 as seed ortholog is 100%.
Bootstrap support for H3G9F5 as seed ortholog is 99%.

Group of orthologs #1294. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:167

A8IAV6              	100.00%		H3H394              	100.00%
Bootstrap support for A8IAV6 as seed ortholog is 99%.
Bootstrap support for H3H394 as seed ortholog is 100%.

Group of orthologs #1295. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.ramorum:167

A8JCU7              	100.00%		H3GQ98              	100.00%
Bootstrap support for A8JCU7 as seed ortholog is 100%.
Bootstrap support for H3GQ98 as seed ortholog is 100%.

Group of orthologs #1296. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:167

A8JFB1              	100.00%		H3GU37              	100.00%
Bootstrap support for A8JFB1 as seed ortholog is 91%.
Bootstrap support for H3GU37 as seed ortholog is 100%.

Group of orthologs #1297. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.ramorum:119

A8I8S8              	100.00%		H3GGB9              	100.00%
A8J0C2              	77.13%		H3HD46              	16.90%
A8HV32              	18.97%		
Bootstrap support for A8I8S8 as seed ortholog is 100%.
Bootstrap support for H3GGB9 as seed ortholog is 99%.

Group of orthologs #1298. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:166

A8JCC5              	100.00%		H3GUB2              	100.00%
                    	       		H3HD49              	40.08%
Bootstrap support for A8JCC5 as seed ortholog is 94%.
Bootstrap support for H3GUB2 as seed ortholog is 100%.

Group of orthologs #1299. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.ramorum:166

A8I074              	100.00%		H3G7Q5              	100.00%
Bootstrap support for A8I074 as seed ortholog is 100%.
Bootstrap support for H3G7Q5 as seed ortholog is 100%.

Group of orthologs #1300. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.ramorum:166

A8IRJ7              	100.00%		H3GEQ8              	100.00%
Bootstrap support for A8IRJ7 as seed ortholog is 100%.
Bootstrap support for H3GEQ8 as seed ortholog is 100%.

Group of orthologs #1301. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.ramorum:166

A8J9G0              	100.00%		H3GBJ2              	100.00%
Bootstrap support for A8J9G0 as seed ortholog is 100%.
Bootstrap support for H3GBJ2 as seed ortholog is 100%.

Group of orthologs #1302. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:105

A8JFK6              	100.00%		H3G961              	100.00%
Bootstrap support for A8JFK6 as seed ortholog is 95%.
Bootstrap support for H3G961 as seed ortholog is 100%.

Group of orthologs #1303. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.ramorum:166

A8J901              	100.00%		H3GIG5              	100.00%
Bootstrap support for A8J901 as seed ortholog is 78%.
Bootstrap support for H3GIG5 as seed ortholog is 100%.

Group of orthologs #1304. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.ramorum:166

A8J963              	100.00%		H3GZZ8              	100.00%
Bootstrap support for A8J963 as seed ortholog is 100%.
Bootstrap support for H3GZZ8 as seed ortholog is 100%.

Group of orthologs #1305. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:165

A8HTY7              	100.00%		H3GX08              	100.00%
A8J9R1              	12.09%		
A8J7G3              	12.00%		
A8I453              	7.28%		
Bootstrap support for A8HTY7 as seed ortholog is 63%.
Alternative seed ortholog is A8IMV6 (54 bits away from this cluster)
Bootstrap support for H3GX08 as seed ortholog is 100%.

Group of orthologs #1306. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:165

A8J9H6              	100.00%		H3G7Z8              	100.00%
                    	       		H3H6P9              	56.42%
                    	       		H3H2D9              	15.21%
Bootstrap support for A8J9H6 as seed ortholog is 100%.
Bootstrap support for H3G7Z8 as seed ortholog is 100%.

Group of orthologs #1307. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:82

A8JC99              	100.00%		H3GED4              	100.00%
                    	       		H3GEC0              	98.66%
Bootstrap support for A8JC99 as seed ortholog is 100%.
Bootstrap support for H3GED4 as seed ortholog is 95%.

Group of orthologs #1308. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:74

A8I108              	100.00%		H3HDG5              	100.00%
A8JCA4              	26.27%		
Bootstrap support for A8I108 as seed ortholog is 98%.
Bootstrap support for H3HDG5 as seed ortholog is 96%.

Group of orthologs #1309. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.ramorum:77

A8JHJ5              	100.00%		H3GVU4              	100.00%
                    	       		H3GVU5              	66.73%
Bootstrap support for A8JHJ5 as seed ortholog is 75%.
Bootstrap support for H3GVU4 as seed ortholog is 98%.

Group of orthologs #1310. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:165

A8J9T0              	100.00%		H3GAE0              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for H3GAE0 as seed ortholog is 100%.

Group of orthologs #1311. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:117

A8JD65              	100.00%		H3GA55              	100.00%
Bootstrap support for A8JD65 as seed ortholog is 100%.
Bootstrap support for H3GA55 as seed ortholog is 99%.

Group of orthologs #1312. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:165

A8J191              	100.00%		H3GUX3              	100.00%
Bootstrap support for A8J191 as seed ortholog is 100%.
Bootstrap support for H3GUX3 as seed ortholog is 100%.

Group of orthologs #1313. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:165

A8J5A8              	100.00%		H3GSX0              	100.00%
Bootstrap support for A8J5A8 as seed ortholog is 100%.
Bootstrap support for H3GSX0 as seed ortholog is 100%.

Group of orthologs #1314. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:165

A8J3X5              	100.00%		H3GX22              	100.00%
Bootstrap support for A8J3X5 as seed ortholog is 100%.
Bootstrap support for H3GX22 as seed ortholog is 100%.

Group of orthologs #1315. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.ramorum:165

A8J6X7              	100.00%		H3GWL3              	100.00%
Bootstrap support for A8J6X7 as seed ortholog is 100%.
Bootstrap support for H3GWL3 as seed ortholog is 100%.

Group of orthologs #1316. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.ramorum:164

A8HPM9              	100.00%		H3GQ87              	100.00%
Bootstrap support for A8HPM9 as seed ortholog is 100%.
Bootstrap support for H3GQ87 as seed ortholog is 100%.

Group of orthologs #1317. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.ramorum:164

A8J7N2              	100.00%		H3GSJ5              	100.00%
Bootstrap support for A8J7N2 as seed ortholog is 100%.
Bootstrap support for H3GSJ5 as seed ortholog is 100%.

Group of orthologs #1318. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:103

A8J0I9              	100.00%		H3GBA3              	100.00%
                    	       		H3GHJ3              	68.08%
                    	       		H3G8M0              	26.92%
                    	       		H3G9G3              	13.85%
                    	       		H3G8Z3              	13.46%
                    	       		H3G9M9              	13.46%
                    	       		H3GB66              	10.19%
                    	       		H3GJP2              	5.19%
Bootstrap support for A8J0I9 as seed ortholog is 93%.
Bootstrap support for H3GBA3 as seed ortholog is 99%.

Group of orthologs #1319. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:163

A8HVN9              	100.00%		H3G7L6              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 100%.
Bootstrap support for H3G7L6 as seed ortholog is 100%.

Group of orthologs #1320. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:44

A8HUK0              	100.00%		H3G8A5              	100.00%
Bootstrap support for A8HUK0 as seed ortholog is 99%.
Bootstrap support for H3G8A5 as seed ortholog is 99%.

Group of orthologs #1321. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:163

A8IJ00              	100.00%		H3GA82              	100.00%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for H3GA82 as seed ortholog is 100%.

Group of orthologs #1322. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:40

A8ICX5              	100.00%		H3GMV0              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for H3GMV0 as seed ortholog is 86%.

Group of orthologs #1323. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:163

A8J951              	100.00%		H3G997              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for H3G997 as seed ortholog is 100%.

Group of orthologs #1324. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:105

A8J3U2              	100.00%		H3GQZ6              	100.00%
Bootstrap support for A8J3U2 as seed ortholog is 99%.
Bootstrap support for H3GQZ6 as seed ortholog is 99%.

Group of orthologs #1325. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:163

A8JGT2              	100.00%		H3GM35              	100.00%
Bootstrap support for A8JGT2 as seed ortholog is 100%.
Bootstrap support for H3GM35 as seed ortholog is 100%.

Group of orthologs #1326. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.ramorum:163

A8J450              	100.00%		H3HCW5              	100.00%
Bootstrap support for A8J450 as seed ortholog is 100%.
Bootstrap support for H3HCW5 as seed ortholog is 100%.

Group of orthologs #1327. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.ramorum:162

A8I403              	100.00%		H3G8P8              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for H3G8P8 as seed ortholog is 100%.

Group of orthologs #1328. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.ramorum:49

A8IS64              	100.00%		H3H344              	100.00%
Bootstrap support for A8IS64 as seed ortholog is 60%.
Alternative seed ortholog is A8IF21 (9 bits away from this cluster)
Bootstrap support for H3H344 as seed ortholog is 91%.

Group of orthologs #1329. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.ramorum:58

A8J942              	100.00%		H3G8H9              	100.00%
A8JA41              	21.38%		
Bootstrap support for A8J942 as seed ortholog is 99%.
Bootstrap support for H3G8H9 as seed ortholog is 97%.

Group of orthologs #1330. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.ramorum:161

A8HUC3              	100.00%		H3G5S1              	100.00%
Bootstrap support for A8HUC3 as seed ortholog is 100%.
Bootstrap support for H3G5S1 as seed ortholog is 100%.

Group of orthologs #1331. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 P.ramorum:79

A8HXY9              	100.00%		H3G7P2              	100.00%
Bootstrap support for A8HXY9 as seed ortholog is 40%.
Alternative seed ortholog is A8ISP5 (13 bits away from this cluster)
Bootstrap support for H3G7P2 as seed ortholog is 97%.

Group of orthologs #1332. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.ramorum:21

A8IPJ0              	100.00%		H3GBF0              	100.00%
Bootstrap support for A8IPJ0 as seed ortholog is 66%.
Alternative seed ortholog is A8JI17 (4 bits away from this cluster)
Bootstrap support for H3GBF0 as seed ortholog is 69%.
Alternative seed ortholog is H3H2I0 (21 bits away from this cluster)

Group of orthologs #1333. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:87

A8JES7              	100.00%		H3G6E1              	100.00%
Bootstrap support for A8JES7 as seed ortholog is 99%.
Bootstrap support for H3G6E1 as seed ortholog is 99%.

Group of orthologs #1334. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.ramorum:161

A8IV25              	100.00%		H3GQR9              	100.00%
Bootstrap support for A8IV25 as seed ortholog is 100%.
Bootstrap support for H3GQR9 as seed ortholog is 100%.

Group of orthologs #1335. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:89

A8IBI1              	100.00%		H3GYX6              	100.00%
Bootstrap support for A8IBI1 as seed ortholog is 99%.
Bootstrap support for H3GYX6 as seed ortholog is 99%.

Group of orthologs #1336. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.ramorum:161

A8J3K9              	100.00%		H3HD98              	100.00%
Bootstrap support for A8J3K9 as seed ortholog is 85%.
Bootstrap support for H3HD98 as seed ortholog is 100%.

Group of orthologs #1337. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:160

A8IAI7              	100.00%		H3G7X5              	100.00%
Bootstrap support for A8IAI7 as seed ortholog is 100%.
Bootstrap support for H3G7X5 as seed ortholog is 100%.

Group of orthologs #1338. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:160

A8HQD2              	100.00%		H3GS83              	100.00%
Bootstrap support for A8HQD2 as seed ortholog is 99%.
Bootstrap support for H3GS83 as seed ortholog is 100%.

Group of orthologs #1339. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.ramorum:160

A8IRF7              	100.00%		H3GKL5              	100.00%
Bootstrap support for A8IRF7 as seed ortholog is 100%.
Bootstrap support for H3GKL5 as seed ortholog is 100%.

Group of orthologs #1340. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.ramorum:160

A8IQD4              	100.00%		H3GW85              	100.00%
Bootstrap support for A8IQD4 as seed ortholog is 100%.
Bootstrap support for H3GW85 as seed ortholog is 100%.

Group of orthologs #1341. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.ramorum:78

A8J4E1              	100.00%		H3GR50              	100.00%
Bootstrap support for A8J4E1 as seed ortholog is 95%.
Bootstrap support for H3GR50 as seed ortholog is 99%.

Group of orthologs #1342. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.ramorum:66

A8IXR5              	100.00%		H3GXG5              	100.00%
Bootstrap support for A8IXR5 as seed ortholog is 100%.
Bootstrap support for H3GXG5 as seed ortholog is 99%.

Group of orthologs #1343. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.ramorum:160

A8JFC3              	100.00%		H3GH48              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for H3GH48 as seed ortholog is 100%.

Group of orthologs #1344. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.ramorum:159

A8JGN8              	100.00%		H3GZV5              	100.00%
Bootstrap support for A8JGN8 as seed ortholog is 70%.
Alternative seed ortholog is A8I9H8 (32 bits away from this cluster)
Bootstrap support for H3GZV5 as seed ortholog is 100%.

Group of orthologs #1345. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:158

A8IS13              	100.00%		H3G6M2              	100.00%
A8HSX7              	61.51%		
Bootstrap support for A8IS13 as seed ortholog is 99%.
Bootstrap support for H3G6M2 as seed ortholog is 100%.

Group of orthologs #1346. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.ramorum:15

A8IWW7              	100.00%		H3G551              	100.00%
O22448              	5.69%		
Bootstrap support for A8IWW7 as seed ortholog is 76%.
Bootstrap support for H3G551 as seed ortholog is 70%.
Alternative seed ortholog is H3GIS8 (15 bits away from this cluster)

Group of orthologs #1347. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.ramorum:158

A8IRW9              	100.00%		H3G9R6              	100.00%
A8IRW7              	10.57%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for H3G9R6 as seed ortholog is 100%.

Group of orthologs #1348. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.ramorum:158

A8JG03              	100.00%		H3H3D6              	100.00%
                    	       		H3GUI6              	43.36%
Bootstrap support for A8JG03 as seed ortholog is 100%.
Bootstrap support for H3H3D6 as seed ortholog is 100%.

Group of orthologs #1349. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.ramorum:158

A8IJZ6              	100.00%		H3GFY5              	100.00%
Bootstrap support for A8IJZ6 as seed ortholog is 100%.
Bootstrap support for H3GFY5 as seed ortholog is 100%.

Group of orthologs #1350. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.ramorum:158

A8IR25              	100.00%		H3GKI1              	100.00%
Bootstrap support for A8IR25 as seed ortholog is 100%.
Bootstrap support for H3GKI1 as seed ortholog is 100%.

Group of orthologs #1351. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.ramorum:158

A8J1B8              	100.00%		H3GKR4              	100.00%
Bootstrap support for A8J1B8 as seed ortholog is 100%.
Bootstrap support for H3GKR4 as seed ortholog is 100%.

Group of orthologs #1352. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:158

A8J6E2              	100.00%		H3GSD1              	100.00%
Bootstrap support for A8J6E2 as seed ortholog is 93%.
Bootstrap support for H3GSD1 as seed ortholog is 100%.

Group of orthologs #1353. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

A8J2X5              	100.00%		H3GM07              	100.00%
                    	       		H3H9T9              	25.17%
Bootstrap support for A8J2X5 as seed ortholog is 100%.
Bootstrap support for H3GM07 as seed ortholog is 100%.

Group of orthologs #1354. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

A8J599              	100.00%		H3GBC6              	100.00%
Bootstrap support for A8J599 as seed ortholog is 100%.
Bootstrap support for H3GBC6 as seed ortholog is 100%.

Group of orthologs #1355. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

A8JGK1              	100.00%		H3G808              	100.00%
Bootstrap support for A8JGK1 as seed ortholog is 100%.
Bootstrap support for H3G808 as seed ortholog is 100%.

Group of orthologs #1356. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

A8JA23              	100.00%		H3GG52              	100.00%
Bootstrap support for A8JA23 as seed ortholog is 100%.
Bootstrap support for H3GG52 as seed ortholog is 100%.

Group of orthologs #1357. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

A8IU94              	100.00%		H3GY54              	100.00%
Bootstrap support for A8IU94 as seed ortholog is 100%.
Bootstrap support for H3GY54 as seed ortholog is 100%.

Group of orthologs #1358. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:31

A8JFN9              	100.00%		H3GGW7              	100.00%
Bootstrap support for A8JFN9 as seed ortholog is 100%.
Bootstrap support for H3GGW7 as seed ortholog is 79%.

Group of orthologs #1359. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

A8IIM0              	100.00%		H3HAQ8              	100.00%
Bootstrap support for A8IIM0 as seed ortholog is 100%.
Bootstrap support for H3HAQ8 as seed ortholog is 100%.

Group of orthologs #1360. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.ramorum:157

P26526              	100.00%		H3GQP5              	100.00%
Bootstrap support for P26526 as seed ortholog is 100%.
Bootstrap support for H3GQP5 as seed ortholog is 100%.

Group of orthologs #1361. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8JGH3              	100.00%		H3GWK6              	100.00%
A8JGH0              	24.45%		H3GEV2              	14.74%
A8J1F3              	19.59%		
A8JGH2              	15.84%		
A8JGH4              	13.02%		
Bootstrap support for A8JGH3 as seed ortholog is 100%.
Bootstrap support for H3GWK6 as seed ortholog is 100%.

Group of orthologs #1362. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8I5J8              	100.00%		H3G9V7              	100.00%
A8I7X6              	27.95%		
Bootstrap support for A8I5J8 as seed ortholog is 100%.
Bootstrap support for H3G9V7 as seed ortholog is 100%.

Group of orthologs #1363. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:80

A8IEU2              	100.00%		H3G9I0              	100.00%
Bootstrap support for A8IEU2 as seed ortholog is 100%.
Bootstrap support for H3G9I0 as seed ortholog is 98%.

Group of orthologs #1364. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8IUH9              	100.00%		H3GNK7              	100.00%
Bootstrap support for A8IUH9 as seed ortholog is 100%.
Bootstrap support for H3GNK7 as seed ortholog is 100%.

Group of orthologs #1365. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8JHU5              	100.00%		H3GKK2              	100.00%
Bootstrap support for A8JHU5 as seed ortholog is 100%.
Bootstrap support for H3GKK2 as seed ortholog is 100%.

Group of orthologs #1366. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8J4X2              	100.00%		H3H8V7              	100.00%
Bootstrap support for A8J4X2 as seed ortholog is 100%.
Bootstrap support for H3H8V7 as seed ortholog is 100%.

Group of orthologs #1367. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8J0K7              	100.00%		H3HDB3              	100.00%
Bootstrap support for A8J0K7 as seed ortholog is 100%.
Bootstrap support for H3HDB3 as seed ortholog is 100%.

Group of orthologs #1368. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.ramorum:156

A8J2V3              	100.00%		H3HDZ9              	100.00%
Bootstrap support for A8J2V3 as seed ortholog is 100%.
Bootstrap support for H3HDZ9 as seed ortholog is 100%.

Group of orthologs #1369. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.ramorum:155

A8J0T9              	100.00%		H3GC96              	100.00%
A8ISJ2              	100.00%		H3GL72              	100.00%
                    	       		H3GBJ0              	6.18%
Bootstrap support for A8J0T9 as seed ortholog is 81%.
Bootstrap support for A8ISJ2 as seed ortholog is 56%.
Alternative seed ortholog is A8J5G2 (29 bits away from this cluster)
Bootstrap support for H3GC96 as seed ortholog is 100%.
Bootstrap support for H3GL72 as seed ortholog is 100%.

Group of orthologs #1370. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.ramorum:155

A8I9M1              	100.00%		H3GA70              	100.00%
                    	       		H3GM06              	19.47%
Bootstrap support for A8I9M1 as seed ortholog is 90%.
Bootstrap support for H3GA70 as seed ortholog is 100%.

Group of orthologs #1371. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.ramorum:155

A8IJ79              	100.00%		H3G8Z1              	100.00%
                    	       		H3G9E6              	31.82%
Bootstrap support for A8IJ79 as seed ortholog is 100%.
Bootstrap support for H3G8Z1 as seed ortholog is 100%.

Group of orthologs #1372. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.ramorum:155

A8HPE7              	100.00%		H3HC72              	100.00%
                    	       		H3GAT1              	11.40%
Bootstrap support for A8HPE7 as seed ortholog is 100%.
Bootstrap support for H3HC72 as seed ortholog is 100%.

Group of orthologs #1373. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.ramorum:155

A8JB53              	100.00%		H3G545              	100.00%
Bootstrap support for A8JB53 as seed ortholog is 100%.
Bootstrap support for H3G545 as seed ortholog is 100%.

Group of orthologs #1374. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.ramorum:76

A8JB67              	100.00%		H3GAA6              	100.00%
Bootstrap support for A8JB67 as seed ortholog is 100%.
Bootstrap support for H3GAA6 as seed ortholog is 99%.

Group of orthologs #1375. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.ramorum:155

A8J128              	100.00%		H3H2T6              	100.00%
Bootstrap support for A8J128 as seed ortholog is 100%.
Bootstrap support for H3H2T6 as seed ortholog is 100%.

Group of orthologs #1376. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.ramorum:154

A8J8T4              	100.00%		H3GV37              	100.00%
                    	       		H3GES9              	13.57%
                    	       		H3GKT3              	10.77%
Bootstrap support for A8J8T4 as seed ortholog is 100%.
Bootstrap support for H3GV37 as seed ortholog is 100%.

Group of orthologs #1377. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.ramorum:154

A8I311              	100.00%		H3GVD1              	100.00%
Bootstrap support for A8I311 as seed ortholog is 100%.
Bootstrap support for H3GVD1 as seed ortholog is 100%.

Group of orthologs #1378. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.ramorum:154

A8J9X6              	100.00%		H3GEU2              	100.00%
Bootstrap support for A8J9X6 as seed ortholog is 100%.
Bootstrap support for H3GEU2 as seed ortholog is 100%.

Group of orthologs #1379. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.ramorum:106

A8JH63              	100.00%		H3G7V8              	100.00%
Bootstrap support for A8JH63 as seed ortholog is 100%.
Bootstrap support for H3G7V8 as seed ortholog is 99%.

Group of orthologs #1380. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.ramorum:153

A8IKI9              	100.00%		H3GHN9              	100.00%
Bootstrap support for A8IKI9 as seed ortholog is 100%.
Bootstrap support for H3GHN9 as seed ortholog is 100%.

Group of orthologs #1381. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.ramorum:153

A8IYF7              	100.00%		H3GDY4              	100.00%
Bootstrap support for A8IYF7 as seed ortholog is 72%.
Alternative seed ortholog is A8JBL9 (30 bits away from this cluster)
Bootstrap support for H3GDY4 as seed ortholog is 100%.

Group of orthologs #1382. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.ramorum:153

A8ICX2              	100.00%		H3H1C0              	100.00%
Bootstrap support for A8ICX2 as seed ortholog is 100%.
Bootstrap support for H3H1C0 as seed ortholog is 100%.

Group of orthologs #1383. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.ramorum:75

A8HST2              	100.00%		H3HDU7              	100.00%
Bootstrap support for A8HST2 as seed ortholog is 100%.
Bootstrap support for H3HDU7 as seed ortholog is 95%.

Group of orthologs #1384. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:152

A8ICT1              	100.00%		H3GA71              	100.00%
                    	       		H3G9U1              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for H3GA71 as seed ortholog is 100%.
Bootstrap support for H3G9U1 as seed ortholog is 100%.

Group of orthologs #1385. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:152

A8ITX1              	100.00%		H3G786              	100.00%
Bootstrap support for A8ITX1 as seed ortholog is 100%.
Bootstrap support for H3G786 as seed ortholog is 100%.

Group of orthologs #1386. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:29

A8I7D3              	100.00%		H3GI38              	100.00%
Bootstrap support for A8I7D3 as seed ortholog is 89%.
Bootstrap support for H3GI38 as seed ortholog is 50%.
Alternative seed ortholog is H3H4A2 (29 bits away from this cluster)

Group of orthologs #1387. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:152

A8HVS7              	100.00%		H3GVC1              	100.00%
Bootstrap support for A8HVS7 as seed ortholog is 100%.
Bootstrap support for H3GVC1 as seed ortholog is 100%.

Group of orthologs #1388. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:63

A8IIF8              	100.00%		H3GX87              	100.00%
Bootstrap support for A8IIF8 as seed ortholog is 91%.
Bootstrap support for H3GX87 as seed ortholog is 96%.

Group of orthologs #1389. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:152

Q6V506              	100.00%		H3GFL7              	100.00%
Bootstrap support for Q6V506 as seed ortholog is 100%.
Bootstrap support for H3GFL7 as seed ortholog is 100%.

Group of orthologs #1390. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:152

A8IDZ1              	100.00%		H3HB92              	100.00%
Bootstrap support for A8IDZ1 as seed ortholog is 100%.
Bootstrap support for H3HB92 as seed ortholog is 100%.

Group of orthologs #1391. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.ramorum:152

A8JF38              	100.00%		H3GV87              	100.00%
Bootstrap support for A8JF38 as seed ortholog is 100%.
Bootstrap support for H3GV87 as seed ortholog is 100%.

Group of orthologs #1392. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.ramorum:152

A8JGJ4              	100.00%		H3HD13              	100.00%
Bootstrap support for A8JGJ4 as seed ortholog is 79%.
Bootstrap support for H3HD13 as seed ortholog is 100%.

Group of orthologs #1393. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.ramorum:6

A8HRE7              	100.00%		H3GC05              	100.00%
                    	       		H3GIU1              	19.67%
                    	       		H3GC07              	17.96%
                    	       		H3GIU6              	16.64%
                    	       		H3GM04              	6.78%
Bootstrap support for A8HRE7 as seed ortholog is 69%.
Alternative seed ortholog is A8HTA5 (15 bits away from this cluster)
Bootstrap support for H3GC05 as seed ortholog is 80%.

Group of orthologs #1394. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.ramorum:151

A8IRA8              	100.00%		H3GZR2              	100.00%
                    	       		H3GNN9              	31.63%
Bootstrap support for A8IRA8 as seed ortholog is 100%.
Bootstrap support for H3GZR2 as seed ortholog is 100%.

Group of orthologs #1395. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.ramorum:75

A8IW01              	100.00%		H3H1P5              	100.00%
                    	       		H3H1N9              	18.97%
Bootstrap support for A8IW01 as seed ortholog is 100%.
Bootstrap support for H3H1P5 as seed ortholog is 98%.

Group of orthologs #1396. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.ramorum:151

A8J7X6              	100.00%		H3GUM6              	100.00%
                    	       		H3GUM5              	17.99%
Bootstrap support for A8J7X6 as seed ortholog is 100%.
Bootstrap support for H3GUM6 as seed ortholog is 100%.

Group of orthologs #1397. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.ramorum:151

A8IAD0              	100.00%		H3GMW9              	100.00%
Bootstrap support for A8IAD0 as seed ortholog is 100%.
Bootstrap support for H3GMW9 as seed ortholog is 100%.

Group of orthologs #1398. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:151

A8J7F5              	100.00%		H3GAL5              	100.00%
Bootstrap support for A8J7F5 as seed ortholog is 100%.
Bootstrap support for H3GAL5 as seed ortholog is 100%.

Group of orthologs #1399. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:94

A8JHR3              	100.00%		H3GCK6              	100.00%
Bootstrap support for A8JHR3 as seed ortholog is 94%.
Bootstrap support for H3GCK6 as seed ortholog is 99%.

Group of orthologs #1400. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.ramorum:105

A8J950              	100.00%		H3H388              	100.00%
Bootstrap support for A8J950 as seed ortholog is 100%.
Bootstrap support for H3H388 as seed ortholog is 98%.

Group of orthologs #1401. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:1

A8IDJ5              	100.00%		H3GMX6              	100.00%
                    	       		H3GMX7              	50.83%
                    	       		H3GRK4              	36.64%
                    	       		H3GRK3              	33.06%
                    	       		H3GCA0              	25.48%
                    	       		H3GX65              	24.52%
                    	       		H3HAU3              	16.39%
Bootstrap support for A8IDJ5 as seed ortholog is 100%.
Bootstrap support for H3GMX6 as seed ortholog is 76%.

Group of orthologs #1402. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8HSY2              	100.00%		H3GUN3              	100.00%
A8JFU7              	100.00%		H3GG30              	100.00%
A8JFU8              	51.54%		H3G8K9              	87.69%
A8JD29              	5.69%		
Bootstrap support for A8HSY2 as seed ortholog is 100%.
Bootstrap support for A8JFU7 as seed ortholog is 100%.
Bootstrap support for H3GUN3 as seed ortholog is 100%.
Bootstrap support for H3GG30 as seed ortholog is 100%.

Group of orthologs #1403. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8HQP1              	100.00%		H3H6N4              	100.00%
                    	       		H3GAT0              	83.84%
                    	       		H3GVY9              	74.08%
                    	       		H3H6N3              	50.24%
Bootstrap support for A8HQP1 as seed ortholog is 100%.
Bootstrap support for H3H6N4 as seed ortholog is 100%.

Group of orthologs #1404. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8IB34              	100.00%		H3GBG6              	100.00%
Bootstrap support for A8IB34 as seed ortholog is 100%.
Bootstrap support for H3GBG6 as seed ortholog is 100%.

Group of orthologs #1405. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8J097              	100.00%		H3G797              	100.00%
Bootstrap support for A8J097 as seed ortholog is 100%.
Bootstrap support for H3G797 as seed ortholog is 100%.

Group of orthologs #1406. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8J5T0              	100.00%		H3G581              	100.00%
Bootstrap support for A8J5T0 as seed ortholog is 100%.
Bootstrap support for H3G581 as seed ortholog is 100%.

Group of orthologs #1407. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8J6L2              	100.00%		H3GAK9              	100.00%
Bootstrap support for A8J6L2 as seed ortholog is 100%.
Bootstrap support for H3GAK9 as seed ortholog is 100%.

Group of orthologs #1408. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:9

A8JFY9              	100.00%		H3GDW1              	100.00%
Bootstrap support for A8JFY9 as seed ortholog is 100%.
Bootstrap support for H3GDW1 as seed ortholog is 56%.
Alternative seed ortholog is H3GLX3 (9 bits away from this cluster)

Group of orthologs #1409. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.ramorum:150

A8J2U2              	100.00%		H3GYH3              	100.00%
Bootstrap support for A8J2U2 as seed ortholog is 100%.
Bootstrap support for H3GYH3 as seed ortholog is 100%.

Group of orthologs #1410. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.ramorum:149

A8HQC1              	100.00%		H3GFQ4              	100.00%
Bootstrap support for A8HQC1 as seed ortholog is 100%.
Bootstrap support for H3GFQ4 as seed ortholog is 100%.

Group of orthologs #1411. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.ramorum:149

A8IUN8              	100.00%		H3H2P4              	100.00%
Bootstrap support for A8IUN8 as seed ortholog is 100%.
Bootstrap support for H3H2P4 as seed ortholog is 100%.

Group of orthologs #1412. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.ramorum:37

A8I333              	100.00%		H3G5P1              	100.00%
A8J5E7              	26.26%		H3G6W9              	77.55%
                    	       		H3H2W7              	58.42%
                    	       		H3H7J5              	37.84%
                    	       		H3G5J2              	24.32%
Bootstrap support for A8I333 as seed ortholog is 99%.
Bootstrap support for H3G5P1 as seed ortholog is 88%.

Group of orthologs #1413. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:41

Q9LLJ1              	100.00%		H3GQR4              	100.00%
                    	       		H3GQE4              	14.17%
                    	       		H3GJU6              	13.58%
                    	       		H3GN81              	12.69%
                    	       		H3GUL7              	9.80%
                    	       		H3GVR6              	7.32%
Bootstrap support for Q9LLJ1 as seed ortholog is 100%.
Bootstrap support for H3GQR4 as seed ortholog is 71%.
Alternative seed ortholog is H3H5E8 (41 bits away from this cluster)

Group of orthologs #1414. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8J5L0              	100.00%		H3H6K8              	100.00%
A8J5K8              	8.14%		
Bootstrap support for A8J5L0 as seed ortholog is 100%.
Bootstrap support for H3H6K8 as seed ortholog is 100%.

Group of orthologs #1415. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8I032              	100.00%		H3G8U8              	100.00%
Bootstrap support for A8I032 as seed ortholog is 100%.
Bootstrap support for H3G8U8 as seed ortholog is 100%.

Group of orthologs #1416. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8ITI4              	100.00%		H3GF34              	100.00%
Bootstrap support for A8ITI4 as seed ortholog is 100%.
Bootstrap support for H3GF34 as seed ortholog is 100%.

Group of orthologs #1417. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8J804              	100.00%		H3GCM4              	100.00%
Bootstrap support for A8J804 as seed ortholog is 100%.
Bootstrap support for H3GCM4 as seed ortholog is 100%.

Group of orthologs #1418. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:6

A8JGI0              	100.00%		H3G7X8              	100.00%
Bootstrap support for A8JGI0 as seed ortholog is 98%.
Bootstrap support for H3G7X8 as seed ortholog is 42%.
Alternative seed ortholog is H3G525 (6 bits away from this cluster)

Group of orthologs #1419. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:4

A8IJP9              	100.00%		H3H179              	100.00%
Bootstrap support for A8IJP9 as seed ortholog is 100%.
Bootstrap support for H3H179 as seed ortholog is 53%.
Alternative seed ortholog is H3GSF8 (4 bits away from this cluster)

Group of orthologs #1420. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8IZS9              	100.00%		H3GUX5              	100.00%
Bootstrap support for A8IZS9 as seed ortholog is 100%.
Bootstrap support for H3GUX5 as seed ortholog is 100%.

Group of orthologs #1421. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8IIA0              	100.00%		H3H3X6              	100.00%
Bootstrap support for A8IIA0 as seed ortholog is 100%.
Bootstrap support for H3H3X6 as seed ortholog is 100%.

Group of orthologs #1422. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.ramorum:148

A8I6L8              	100.00%		H3HBU3              	100.00%
Bootstrap support for A8I6L8 as seed ortholog is 100%.
Bootstrap support for H3HBU3 as seed ortholog is 100%.

Group of orthologs #1423. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:148

A8J1C2              	100.00%		H3GYW5              	100.00%
Bootstrap support for A8J1C2 as seed ortholog is 99%.
Bootstrap support for H3GYW5 as seed ortholog is 100%.

Group of orthologs #1424. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.ramorum:147

A8HQK6              	100.00%		H3GSM9              	100.00%
                    	       		H3GSN1              	100.00%
                    	       		H3GSN0              	64.56%
                    	       		H3GSN3              	59.60%
                    	       		H3GSN9              	59.50%
                    	       		H3GSN2              	43.00%
Bootstrap support for A8HQK6 as seed ortholog is 66%.
Alternative seed ortholog is A8I240 (48 bits away from this cluster)
Bootstrap support for H3GSM9 as seed ortholog is 100%.
Bootstrap support for H3GSN1 as seed ortholog is 100%.

Group of orthologs #1425. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:13

A8IRB5              	100.00%		H3GG66              	100.00%
                    	       		H3H3Q4              	60.71%
                    	       		H3H4Y2              	52.49%
Bootstrap support for A8IRB5 as seed ortholog is 100%.
Bootstrap support for H3GG66 as seed ortholog is 62%.
Alternative seed ortholog is H3GHG5 (13 bits away from this cluster)

Group of orthologs #1426. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.ramorum:147

A8IR59              	100.00%		H3GMQ0              	100.00%
                    	       		H3GQ20              	14.22%
                    	       		H3G7C5              	8.02%
Bootstrap support for A8IR59 as seed ortholog is 74%.
Alternative seed ortholog is A8IAF5 (27 bits away from this cluster)
Bootstrap support for H3GMQ0 as seed ortholog is 100%.

Group of orthologs #1427. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:147

A8HQB3              	100.00%		H3HDB7              	100.00%
A8I8X2              	13.69%		
Bootstrap support for A8HQB3 as seed ortholog is 100%.
Bootstrap support for H3HDB7 as seed ortholog is 100%.

Group of orthologs #1428. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.ramorum:147

A8IZB7              	100.00%		H3GA88              	100.00%
Bootstrap support for A8IZB7 as seed ortholog is 56%.
Alternative seed ortholog is A8IIS4 (4 bits away from this cluster)
Bootstrap support for H3GA88 as seed ortholog is 100%.

Group of orthologs #1429. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:147

A8ICD8              	100.00%		H3GTA2              	100.00%
Bootstrap support for A8ICD8 as seed ortholog is 100%.
Bootstrap support for H3GTA2 as seed ortholog is 100%.

Group of orthologs #1430. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.ramorum:147

A8J5C3              	100.00%		H3GED9              	100.00%
Bootstrap support for A8J5C3 as seed ortholog is 100%.
Bootstrap support for H3GED9 as seed ortholog is 100%.

Group of orthologs #1431. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:85

Q39568              	100.00%		H3GHR3              	100.00%
Bootstrap support for Q39568 as seed ortholog is 99%.
Bootstrap support for H3GHR3 as seed ortholog is 99%.

Group of orthologs #1432. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:146

A5YU14              	100.00%		H3GKG5              	100.00%
A8JAD2              	36.20%		H3GKL9              	31.98%
                    	       		H3GKM0              	31.54%
                    	       		H3GKM2              	25.27%
                    	       		H3GQH3              	22.42%
                    	       		H3GQH4              	21.98%
                    	       		H3GWE6              	21.87%
                    	       		H3GES5              	20.88%
                    	       		H3GES4              	20.77%
                    	       		H3GQJ1              	19.56%
                    	       		H3GRJ9              	19.23%
                    	       		H3GMY9              	19.01%
                    	       		H3GAC8              	18.46%
                    	       		H3GGY6              	17.91%
                    	       		H3GRJ4              	16.70%
                    	       		H3GRK0              	16.26%
                    	       		H3H7A8              	15.38%
                    	       		H3GGY5              	15.27%
                    	       		H3GKY4              	15.16%
                    	       		H3GBW0              	14.40%
                    	       		H3H0D6              	7.25%
Bootstrap support for A5YU14 as seed ortholog is 89%.
Bootstrap support for H3GKG5 as seed ortholog is 100%.

Group of orthologs #1433. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.ramorum:146

A8HW82              	100.00%		H3GBW5              	100.00%
Bootstrap support for A8HW82 as seed ortholog is 100%.
Bootstrap support for H3GBW5 as seed ortholog is 100%.

Group of orthologs #1434. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:81

A8I9Z4              	100.00%		H3GD84              	100.00%
Bootstrap support for A8I9Z4 as seed ortholog is 99%.
Bootstrap support for H3GD84 as seed ortholog is 99%.

Group of orthologs #1435. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.ramorum:55

A8J746              	100.00%		H3G9S2              	100.00%
Bootstrap support for A8J746 as seed ortholog is 95%.
Bootstrap support for H3G9S2 as seed ortholog is 99%.

Group of orthologs #1436. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.ramorum:146

A8IW47              	100.00%		H3HBK6              	100.00%
Bootstrap support for A8IW47 as seed ortholog is 100%.
Bootstrap support for H3HBK6 as seed ortholog is 100%.

Group of orthologs #1437. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.ramorum:146

A8JI94              	100.00%		H3GXW9              	100.00%
Bootstrap support for A8JI94 as seed ortholog is 100%.
Bootstrap support for H3GXW9 as seed ortholog is 100%.

Group of orthologs #1438. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.ramorum:37

A8HNI9              	100.00%		H3HC54              	100.00%
A8HQ73              	19.22%		H3GM21              	7.02%
Bootstrap support for A8HNI9 as seed ortholog is 100%.
Bootstrap support for H3HC54 as seed ortholog is 79%.

Group of orthologs #1439. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.ramorum:91

A8J3D3              	100.00%		H3G5B2              	100.00%
Bootstrap support for A8J3D3 as seed ortholog is 100%.
Bootstrap support for H3G5B2 as seed ortholog is 97%.

Group of orthologs #1440. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.ramorum:145

A8J344              	100.00%		H3HCK3              	100.00%
Bootstrap support for A8J344 as seed ortholog is 100%.
Bootstrap support for H3HCK3 as seed ortholog is 100%.

Group of orthologs #1441. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8J6B0              	100.00%		H3H2F6              	100.00%
A8JJE3              	42.70%		H3H2F4              	67.81%
A8J6B4              	26.85%		H3H2F7              	56.95%
A8ITJ7              	5.10%		H3H2F9              	41.45%
                    	       		H3H2F3              	35.46%
                    	       		H3H2F5              	35.38%
                    	       		H3H2F2              	20.61%
                    	       		H3GQ40              	18.37%
                    	       		H3GIS4              	16.21%
                    	       		H3H2G0              	15.02%
                    	       		H3GLS9              	11.74%
                    	       		H3H2F0              	10.54%
Bootstrap support for A8J6B0 as seed ortholog is 100%.
Bootstrap support for H3H2F6 as seed ortholog is 100%.

Group of orthologs #1442. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8HMA7              	100.00%		H3G8U6              	100.00%
Bootstrap support for A8HMA7 as seed ortholog is 100%.
Bootstrap support for H3G8U6 as seed ortholog is 100%.

Group of orthologs #1443. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8HYD2              	100.00%		H3G671              	100.00%
Bootstrap support for A8HYD2 as seed ortholog is 100%.
Bootstrap support for H3G671 as seed ortholog is 100%.

Group of orthologs #1444. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:95

A8IG64              	100.00%		H3G6M7              	100.00%
Bootstrap support for A8IG64 as seed ortholog is 100%.
Bootstrap support for H3G6M7 as seed ortholog is 100%.

Group of orthologs #1445. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8IUP0              	100.00%		H3G990              	100.00%
Bootstrap support for A8IUP0 as seed ortholog is 100%.
Bootstrap support for H3G990 as seed ortholog is 100%.

Group of orthologs #1446. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:144

A8IZC1              	100.00%		H3G6G8              	100.00%
Bootstrap support for A8IZC1 as seed ortholog is 97%.
Bootstrap support for H3G6G8 as seed ortholog is 100%.

Group of orthologs #1447. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8HQH6              	100.00%		H3GS46              	100.00%
Bootstrap support for A8HQH6 as seed ortholog is 100%.
Bootstrap support for H3GS46 as seed ortholog is 100%.

Group of orthologs #1448. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:144

A8IWQ2              	100.00%		H3GEI1              	100.00%
Bootstrap support for A8IWQ2 as seed ortholog is 96%.
Bootstrap support for H3GEI1 as seed ortholog is 100%.

Group of orthologs #1449. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8J2W3              	100.00%		H3G9X2              	100.00%
Bootstrap support for A8J2W3 as seed ortholog is 100%.
Bootstrap support for H3G9X2 as seed ortholog is 100%.

Group of orthologs #1450. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8JDZ0              	100.00%		H3GAE3              	100.00%
Bootstrap support for A8JDZ0 as seed ortholog is 100%.
Bootstrap support for H3GAE3 as seed ortholog is 100%.

Group of orthologs #1451. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.ramorum:53

A8JDX6              	100.00%		H3GLU7              	100.00%
Bootstrap support for A8JDX6 as seed ortholog is 82%.
Bootstrap support for H3GLU7 as seed ortholog is 82%.

Group of orthologs #1452. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:61

A8I9C1              	100.00%		H3HCG9              	100.00%
Bootstrap support for A8I9C1 as seed ortholog is 93%.
Bootstrap support for H3HCG9 as seed ortholog is 96%.

Group of orthologs #1453. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8J7E2              	100.00%		H3H2Y2              	100.00%
Bootstrap support for A8J7E2 as seed ortholog is 100%.
Bootstrap support for H3H2Y2 as seed ortholog is 100%.

Group of orthologs #1454. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.ramorum:144

A8IZY5              	100.00%		H3HCC9              	100.00%
Bootstrap support for A8IZY5 as seed ortholog is 100%.
Bootstrap support for H3HCC9 as seed ortholog is 100%.

Group of orthologs #1455. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8IEM7              	100.00%		H3GDL0              	100.00%
A8I718              	17.95%		H3G8B9              	63.53%
                    	       		H3G8B7              	56.88%
                    	       		H3GJX0              	20.41%
                    	       		H3GJZ1              	19.72%
                    	       		H3GJX1              	19.04%
                    	       		H3GJW6              	17.78%
                    	       		H3HBV6              	17.09%
                    	       		H3GJW7              	17.09%
                    	       		H3H065              	16.40%
                    	       		H3H066              	16.40%
                    	       		H3G7Q2              	15.94%
                    	       		H3GJW8              	13.65%
                    	       		H3GQH0              	12.84%
                    	       		H3GXK4              	11.81%
Bootstrap support for A8IEM7 as seed ortholog is 100%.
Bootstrap support for H3GDL0 as seed ortholog is 100%.

Group of orthologs #1456. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8JHH4              	100.00%		H3GHL5              	100.00%
A8JHH3              	33.51%		H3GR24              	74.80%
                    	       		H3GHL6              	56.85%
                    	       		H3GHL4              	48.50%
                    	       		H3H3A1              	20.63%
Bootstrap support for A8JHH4 as seed ortholog is 100%.
Bootstrap support for H3GHL5 as seed ortholog is 100%.

Group of orthologs #1457. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:44

Q7XJ66              	100.00%		H3GW64              	100.00%
Q84XW3              	35.21%		
A8HN02              	12.21%		
A8JFB4              	10.80%		
Bootstrap support for Q7XJ66 as seed ortholog is 100%.
Bootstrap support for H3GW64 as seed ortholog is 92%.

Group of orthologs #1458. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:82

A8JID7              	100.00%		H3GBY0              	100.00%
A8IGP7              	16.87%		
Bootstrap support for A8JID7 as seed ortholog is 100%.
Bootstrap support for H3GBY0 as seed ortholog is 92%.

Group of orthologs #1459. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8I795              	100.00%		H3G6T3              	100.00%
Bootstrap support for A8I795 as seed ortholog is 100%.
Bootstrap support for H3G6T3 as seed ortholog is 100%.

Group of orthologs #1460. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8HNA4              	100.00%		H3GGZ9              	100.00%
Bootstrap support for A8HNA4 as seed ortholog is 100%.
Bootstrap support for H3GGZ9 as seed ortholog is 100%.

Group of orthologs #1461. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.ramorum:143

A8I0K2              	100.00%		H3GHA1              	100.00%
Bootstrap support for A8I0K2 as seed ortholog is 55%.
Alternative seed ortholog is A8IVQ5 (9 bits away from this cluster)
Bootstrap support for H3GHA1 as seed ortholog is 100%.

Group of orthologs #1462. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:75

A8IRX0              	100.00%		H3G9S4              	100.00%
Bootstrap support for A8IRX0 as seed ortholog is 99%.
Bootstrap support for H3G9S4 as seed ortholog is 99%.

Group of orthologs #1463. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8IVF0              	100.00%		H3G863              	100.00%
Bootstrap support for A8IVF0 as seed ortholog is 100%.
Bootstrap support for H3G863 as seed ortholog is 100%.

Group of orthologs #1464. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:40

A8IE07              	100.00%		H3GHH8              	100.00%
Bootstrap support for A8IE07 as seed ortholog is 100%.
Bootstrap support for H3GHH8 as seed ortholog is 79%.

Group of orthologs #1465. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8IGC6              	100.00%		H3GH52              	100.00%
Bootstrap support for A8IGC6 as seed ortholog is 100%.
Bootstrap support for H3GH52 as seed ortholog is 100%.

Group of orthologs #1466. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8J6M2              	100.00%		H3G881              	100.00%
Bootstrap support for A8J6M2 as seed ortholog is 100%.
Bootstrap support for H3G881 as seed ortholog is 100%.

Group of orthologs #1467. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:143

A8I3B3              	100.00%		H3GUI5              	100.00%
Bootstrap support for A8I3B3 as seed ortholog is 100%.
Bootstrap support for H3GUI5 as seed ortholog is 100%.

Group of orthologs #1468. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.ramorum:40

A8J7Q4              	100.00%		H3GMB8              	100.00%
Bootstrap support for A8J7Q4 as seed ortholog is 100%.
Bootstrap support for H3GMB8 as seed ortholog is 77%.

Group of orthologs #1469. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:29

A8J1W4              	100.00%		H3GVK9              	100.00%
Bootstrap support for A8J1W4 as seed ortholog is 98%.
Bootstrap support for H3GVK9 as seed ortholog is 77%.

Group of orthologs #1470. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:143

A8IGG2              	100.00%		H3HEE6              	100.00%
Bootstrap support for A8IGG2 as seed ortholog is 99%.
Bootstrap support for H3HEE6 as seed ortholog is 100%.

Group of orthologs #1471. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:142

A8I4L7              	100.00%		H3GWP8              	100.00%
A8J1V6              	100.00%		H3GDJ3              	100.00%
                    	       		H3GK53              	100.00%
                    	       		H3GDH9              	49.47%
                    	       		H3HB30              	48.41%
                    	       		H3GDI0              	47.48%
                    	       		H3GDI6              	46.02%
                    	       		H3GDI1              	45.09%
                    	       		H3GDJ2              	44.56%
                    	       		H3GDJ0              	38.73%
                    	       		H3GDJ5              	29.31%
                    	       		H3GDJ4              	27.59%
                    	       		H3GDJ1              	27.06%
                    	       		H3GNE1              	23.61%
                    	       		H3GDH7              	23.31%
                    	       		H3GNE0              	22.94%
                    	       		H3HCC4              	19.89%
                    	       		H3HD30              	18.63%
Bootstrap support for A8I4L7 as seed ortholog is 100%.
Bootstrap support for A8J1V6 as seed ortholog is 100%.
Bootstrap support for H3GWP8 as seed ortholog is 100%.
Bootstrap support for H3GDJ3 as seed ortholog is 100%.
Bootstrap support for H3GK53 as seed ortholog is 100%.

Group of orthologs #1472. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:142

A8J015              	100.00%		H3G8U0              	100.00%
A8JEN2              	28.49%		H3GA58              	57.68%
                    	       		H3HCG3              	25.59%
Bootstrap support for A8J015 as seed ortholog is 100%.
Bootstrap support for H3G8U0 as seed ortholog is 100%.

Group of orthologs #1473. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:142

A8IW20              	100.00%		H3GUW0              	100.00%
                    	       		H3GY66              	9.27%
                    	       		H3HC25              	7.65%
Bootstrap support for A8IW20 as seed ortholog is 100%.
Bootstrap support for H3GUW0 as seed ortholog is 100%.

Group of orthologs #1474. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:142

A8IRT1              	100.00%		H3GEE8              	100.00%
Bootstrap support for A8IRT1 as seed ortholog is 100%.
Bootstrap support for H3GEE8 as seed ortholog is 100%.

Group of orthologs #1475. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:142

A8J7P0              	100.00%		H3GD74              	100.00%
Bootstrap support for A8J7P0 as seed ortholog is 100%.
Bootstrap support for H3GD74 as seed ortholog is 100%.

Group of orthologs #1476. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.ramorum:142

A8IRX8              	100.00%		H3H367              	100.00%
Bootstrap support for A8IRX8 as seed ortholog is 100%.
Bootstrap support for H3H367 as seed ortholog is 100%.

Group of orthologs #1477. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8HPP9              	100.00%		H3GPT4              	100.00%
                    	       		H3H5Z3              	100.00%
Bootstrap support for A8HPP9 as seed ortholog is 100%.
Bootstrap support for H3GPT4 as seed ortholog is 100%.
Bootstrap support for H3H5Z3 as seed ortholog is 100%.

Group of orthologs #1478. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8HZZ8              	100.00%		H3G8X9              	100.00%
Bootstrap support for A8HZZ8 as seed ortholog is 100%.
Bootstrap support for H3G8X9 as seed ortholog is 100%.

Group of orthologs #1479. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8I980              	100.00%		H3G916              	100.00%
Bootstrap support for A8I980 as seed ortholog is 100%.
Bootstrap support for H3G916 as seed ortholog is 100%.

Group of orthologs #1480. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:81

A8IH75              	100.00%		H3G7Q1              	100.00%
Bootstrap support for A8IH75 as seed ortholog is 99%.
Bootstrap support for H3G7Q1 as seed ortholog is 99%.

Group of orthologs #1481. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8IF48              	100.00%		H3GIH1              	100.00%
Bootstrap support for A8IF48 as seed ortholog is 100%.
Bootstrap support for H3GIH1 as seed ortholog is 100%.

Group of orthologs #1482. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8IZ24              	100.00%		H3G9X3              	100.00%
Bootstrap support for A8IZ24 as seed ortholog is 100%.
Bootstrap support for H3G9X3 as seed ortholog is 100%.

Group of orthologs #1483. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8J4Q3              	100.00%		H3G850              	100.00%
Bootstrap support for A8J4Q3 as seed ortholog is 100%.
Bootstrap support for H3G850 as seed ortholog is 100%.

Group of orthologs #1484. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:29

A8IR89              	100.00%		H3GRN0              	100.00%
Bootstrap support for A8IR89 as seed ortholog is 78%.
Bootstrap support for H3GRN0 as seed ortholog is 92%.

Group of orthologs #1485. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.ramorum:141

A8I6W9              	100.00%		H3HBE3              	100.00%
Bootstrap support for A8I6W9 as seed ortholog is 100%.
Bootstrap support for H3HBE3 as seed ortholog is 100%.

Group of orthologs #1486. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:140

A8IWN9              	100.00%		H3GDV6              	100.00%
                    	       		H3G5H6              	29.66%
                    	       		H3G5H5              	18.35%
Bootstrap support for A8IWN9 as seed ortholog is 86%.
Bootstrap support for H3GDV6 as seed ortholog is 100%.

Group of orthologs #1487. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:140

A8I4N7              	100.00%		H3G9I1              	100.00%
Bootstrap support for A8I4N7 as seed ortholog is 99%.
Bootstrap support for H3G9I1 as seed ortholog is 100%.

Group of orthologs #1488. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8HW43              	100.00%		H3GI57              	100.00%
Bootstrap support for A8HW43 as seed ortholog is 100%.
Bootstrap support for H3GI57 as seed ortholog is 100%.

Group of orthologs #1489. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8I5V9              	100.00%		H3GVF6              	100.00%
Bootstrap support for A8I5V9 as seed ortholog is 100%.
Bootstrap support for H3GVF6 as seed ortholog is 100%.

Group of orthologs #1490. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8HYR6              	100.00%		H3H020              	100.00%
Bootstrap support for A8HYR6 as seed ortholog is 100%.
Bootstrap support for H3H020 as seed ortholog is 100%.

Group of orthologs #1491. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8JAY8              	100.00%		H3GDN6              	100.00%
Bootstrap support for A8JAY8 as seed ortholog is 100%.
Bootstrap support for H3GDN6 as seed ortholog is 100%.

Group of orthologs #1492. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8IAA5              	100.00%		H3H2Z1              	100.00%
Bootstrap support for A8IAA5 as seed ortholog is 100%.
Bootstrap support for H3H2Z1 as seed ortholog is 100%.

Group of orthologs #1493. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8IRL1              	100.00%		H3GYY1              	100.00%
Bootstrap support for A8IRL1 as seed ortholog is 100%.
Bootstrap support for H3GYY1 as seed ortholog is 100%.

Group of orthologs #1494. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8JDQ2              	100.00%		H3GHZ9              	100.00%
Bootstrap support for A8JDQ2 as seed ortholog is 100%.
Bootstrap support for H3GHZ9 as seed ortholog is 100%.

Group of orthologs #1495. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.ramorum:140

A8J9F7              	100.00%		H3GNV0              	100.00%
Bootstrap support for A8J9F7 as seed ortholog is 100%.
Bootstrap support for H3GNV0 as seed ortholog is 100%.

Group of orthologs #1496. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:88

A8J9M8              	100.00%		H3GNT1              	100.00%
Bootstrap support for A8J9M8 as seed ortholog is 99%.
Bootstrap support for H3GNT1 as seed ortholog is 99%.

Group of orthologs #1497. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.ramorum:139

A8HQI1              	100.00%		H3H2F1              	100.00%
A8HQG4              	6.73%		H3HE84              	30.54%
                    	       		H3HCX1              	27.16%
Bootstrap support for A8HQI1 as seed ortholog is 70%.
Alternative seed ortholog is A8JF93 (24 bits away from this cluster)
Bootstrap support for H3H2F1 as seed ortholog is 100%.

Group of orthologs #1498. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:47

A8IT75              	100.00%		H3HE01              	100.00%
A8IT48              	42.76%		
A8IT73              	27.63%		
A8IT49              	24.67%		
Bootstrap support for A8IT75 as seed ortholog is 100%.
Bootstrap support for H3HE01 as seed ortholog is 95%.

Group of orthologs #1499. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.ramorum:139

A8JCF5              	100.00%		H3G6S4              	100.00%
                    	       		H3GPY6              	66.38%
Bootstrap support for A8JCF5 as seed ortholog is 74%.
Alternative seed ortholog is A8HN72 (31 bits away from this cluster)
Bootstrap support for H3G6S4 as seed ortholog is 100%.

Group of orthologs #1500. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8I0Y2              	100.00%		H3G9D5              	100.00%
Bootstrap support for A8I0Y2 as seed ortholog is 100%.
Bootstrap support for H3G9D5 as seed ortholog is 100%.

Group of orthologs #1501. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.ramorum:38

A8I6B9              	100.00%		H3G8W7              	100.00%
Bootstrap support for A8I6B9 as seed ortholog is 78%.
Bootstrap support for H3G8W7 as seed ortholog is 94%.

Group of orthologs #1502. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8IM74              	100.00%		H3GAG5              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for H3GAG5 as seed ortholog is 100%.

Group of orthologs #1503. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8HPU0              	100.00%		H3GTH1              	100.00%
Bootstrap support for A8HPU0 as seed ortholog is 100%.
Bootstrap support for H3GTH1 as seed ortholog is 100%.

Group of orthologs #1504. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8I0M3              	100.00%		H3H305              	100.00%
Bootstrap support for A8I0M3 as seed ortholog is 100%.
Bootstrap support for H3H305 as seed ortholog is 100%.

Group of orthologs #1505. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 P.ramorum:32

A8J9I5              	100.00%		H3GI19              	100.00%
Bootstrap support for A8J9I5 as seed ortholog is 52%.
Alternative seed ortholog is A8JEQ5 (2 bits away from this cluster)
Bootstrap support for H3GI19 as seed ortholog is 77%.

Group of orthologs #1506. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8IYY6              	100.00%		H3GWA2              	100.00%
Bootstrap support for A8IYY6 as seed ortholog is 100%.
Bootstrap support for H3GWA2 as seed ortholog is 100%.

Group of orthologs #1507. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8JHF2              	100.00%		H3GE59              	100.00%
Bootstrap support for A8JHF2 as seed ortholog is 100%.
Bootstrap support for H3GE59 as seed ortholog is 100%.

Group of orthologs #1508. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.ramorum:139

A8J0X8              	100.00%		H3HAC3              	100.00%
Bootstrap support for A8J0X8 as seed ortholog is 100%.
Bootstrap support for H3HAC3 as seed ortholog is 100%.

Group of orthologs #1509. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.ramorum:36

A8HMZ3              	100.00%		H3G6E9              	100.00%
A8J3Y2              	7.69%		
Bootstrap support for A8HMZ3 as seed ortholog is 100%.
Bootstrap support for H3G6E9 as seed ortholog is 91%.

Group of orthologs #1510. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.ramorum:138

A8II85              	100.00%		H3GH72              	100.00%
Bootstrap support for A8II85 as seed ortholog is 100%.
Bootstrap support for H3GH72 as seed ortholog is 100%.

Group of orthologs #1511. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.ramorum:138

A8IS54              	100.00%		H3GZ44              	100.00%
Bootstrap support for A8IS54 as seed ortholog is 100%.
Bootstrap support for H3GZ44 as seed ortholog is 100%.

Group of orthologs #1512. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:25

A8J315              	100.00%		H3GRX0              	100.00%
Bootstrap support for A8J315 as seed ortholog is 90%.
Bootstrap support for H3GRX0 as seed ortholog is 77%.

Group of orthologs #1513. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.ramorum:138

A8JFA0              	100.00%		H3GLL0              	100.00%
Bootstrap support for A8JFA0 as seed ortholog is 100%.
Bootstrap support for H3GLL0 as seed ortholog is 100%.

Group of orthologs #1514. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:1

A8I0J4              	100.00%		H3GCB1              	100.00%
                    	       		H3GVD9              	12.13%
                    	       		H3GUB5              	11.91%
                    	       		H3GDG0              	11.49%
                    	       		H3HBB2              	10.96%
                    	       		H3GHW6              	9.89%
Bootstrap support for A8I0J4 as seed ortholog is 100%.
Bootstrap support for H3GCB1 as seed ortholog is 53%.
Alternative seed ortholog is H3GSU1 (1 bits away from this cluster)

Group of orthologs #1515. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:137

A8ILL7              	100.00%		H3GKF9              	100.00%
A8I318              	27.74%		
A8ILM1              	23.98%		
Bootstrap support for A8ILL7 as seed ortholog is 100%.
Bootstrap support for H3GKF9 as seed ortholog is 100%.

Group of orthologs #1516. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:76

A8J0W7              	100.00%		H3H0J3              	100.00%
A8J0W8              	72.83%		
Bootstrap support for A8J0W7 as seed ortholog is 89%.
Bootstrap support for H3H0J3 as seed ortholog is 94%.

Group of orthologs #1517. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:137

A8HNC0              	100.00%		H3G909              	100.00%
Bootstrap support for A8HNC0 as seed ortholog is 100%.
Bootstrap support for H3G909 as seed ortholog is 100%.

Group of orthologs #1518. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.ramorum:137

A8I9M5              	100.00%		H3GK99              	100.00%
Bootstrap support for A8I9M5 as seed ortholog is 92%.
Bootstrap support for H3GK99 as seed ortholog is 100%.

Group of orthologs #1519. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:137

A8HSJ6              	100.00%		H3GSI1              	100.00%
Bootstrap support for A8HSJ6 as seed ortholog is 100%.
Bootstrap support for H3GSI1 as seed ortholog is 100%.

Group of orthologs #1520. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:137

A8IIC5              	100.00%		H3H1C1              	100.00%
Bootstrap support for A8IIC5 as seed ortholog is 99%.
Bootstrap support for H3H1C1 as seed ortholog is 100%.

Group of orthologs #1521. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:137

A8IWT0              	100.00%		H3GW51              	100.00%
Bootstrap support for A8IWT0 as seed ortholog is 100%.
Bootstrap support for H3GW51 as seed ortholog is 100%.

Group of orthologs #1522. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:137

A8J2F6              	100.00%		H3H3N4              	100.00%
Bootstrap support for A8J2F6 as seed ortholog is 100%.
Bootstrap support for H3H3N4 as seed ortholog is 100%.

Group of orthologs #1523. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.ramorum:137

A8J8E1              	100.00%		H3GZT9              	100.00%
Bootstrap support for A8J8E1 as seed ortholog is 100%.
Bootstrap support for H3GZT9 as seed ortholog is 100%.

Group of orthologs #1524. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:136

A8JFT6              	100.00%		H3GI78              	100.00%
A8JFT7              	80.83%		
A8HNR0              	33.43%		
A8ITR3              	33.33%		
A8J0I1              	11.85%		
A8J0G9              	10.09%		
A8J9M6              	8.70%		
Bootstrap support for A8JFT6 as seed ortholog is 86%.
Bootstrap support for H3GI78 as seed ortholog is 100%.

Group of orthologs #1525. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.ramorum:42

A8ITU6              	100.00%		H3GB43              	100.00%
A8ITU2              	91.80%		
Bootstrap support for A8ITU6 as seed ortholog is 61%.
Alternative seed ortholog is A8HPR9 (11 bits away from this cluster)
Bootstrap support for H3GB43 as seed ortholog is 88%.

Group of orthologs #1526. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:136

A8IBG1              	100.00%		H3G703              	100.00%
Bootstrap support for A8IBG1 as seed ortholog is 100%.
Bootstrap support for H3G703 as seed ortholog is 100%.

Group of orthologs #1527. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:136

A8IPS8              	100.00%		H3GBB8              	100.00%
Bootstrap support for A8IPS8 as seed ortholog is 100%.
Bootstrap support for H3GBB8 as seed ortholog is 100%.

Group of orthologs #1528. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:136

A8IXY0              	100.00%		H3G8Z5              	100.00%
Bootstrap support for A8IXY0 as seed ortholog is 100%.
Bootstrap support for H3G8Z5 as seed ortholog is 100%.

Group of orthologs #1529. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:22

A8J0E9              	100.00%		H3G7H8              	100.00%
Bootstrap support for A8J0E9 as seed ortholog is 100%.
Bootstrap support for H3G7H8 as seed ortholog is 76%.

Group of orthologs #1530. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.ramorum:136

A8ITV9              	100.00%		H3HD72              	100.00%
Bootstrap support for A8ITV9 as seed ortholog is 100%.
Bootstrap support for H3HD72 as seed ortholog is 100%.

Group of orthologs #1531. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:136

A8JIG9              	100.00%		H3HBY4              	100.00%
Bootstrap support for A8JIG9 as seed ortholog is 94%.
Bootstrap support for H3HBY4 as seed ortholog is 100%.

Group of orthologs #1532. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.ramorum:135

A8J4K2              	100.00%		H3GQS8              	100.00%
A8HVF8              	16.61%		
Bootstrap support for A8J4K2 as seed ortholog is 100%.
Bootstrap support for H3GQS8 as seed ortholog is 100%.

Group of orthologs #1533. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.ramorum:135

A8HY08              	100.00%		H3HD62              	100.00%
                    	       		H3G5A3              	91.80%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for H3HD62 as seed ortholog is 100%.

Group of orthologs #1534. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.ramorum:9

A8JBM6              	100.00%		H3GPZ2              	100.00%
Bootstrap support for A8JBM6 as seed ortholog is 87%.
Bootstrap support for H3GPZ2 as seed ortholog is 49%.
Alternative seed ortholog is H3GRD8 (9 bits away from this cluster)

Group of orthologs #1535. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.ramorum:135

Q9ZTA7              	100.00%		H3GWV5              	100.00%
Bootstrap support for Q9ZTA7 as seed ortholog is 100%.
Bootstrap support for H3GWV5 as seed ortholog is 100%.

Group of orthologs #1536. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.ramorum:135

A8JIF2              	100.00%		H3H3S9              	100.00%
Bootstrap support for A8JIF2 as seed ortholog is 100%.
Bootstrap support for H3H3S9 as seed ortholog is 100%.

Group of orthologs #1537. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.ramorum:134

A8IYC2              	100.00%		H3H2F8              	100.00%
                    	       		H3H0L7              	11.20%
                    	       		H3GTX8              	6.24%
Bootstrap support for A8IYC2 as seed ortholog is 100%.
Bootstrap support for H3H2F8 as seed ortholog is 100%.

Group of orthologs #1538. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.ramorum:134

A8ISL4              	100.00%		H3G7E0              	100.00%
Bootstrap support for A8ISL4 as seed ortholog is 100%.
Bootstrap support for H3G7E0 as seed ortholog is 100%.

Group of orthologs #1539. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.ramorum:134

A8IRQ1              	100.00%		H3GAS4              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for H3GAS4 as seed ortholog is 100%.

Group of orthologs #1540. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.ramorum:51

A8J470              	100.00%		H3H1G0              	100.00%
A8II51              	20.24%		H3H8P9              	76.79%
A8J7D3              	19.55%		H3GDE0              	45.99%
A8IV51              	17.32%		
A8I8D0              	10.98%		
A8JEP2              	10.81%		
A8IBT2              	10.29%		
A8I8D2              	10.12%		
A8I7Z1              	9.26%		
A8I5E0              	7.72%		
A8HPH4              	6.35%		
Bootstrap support for A8J470 as seed ortholog is 82%.
Bootstrap support for H3H1G0 as seed ortholog is 97%.

Group of orthologs #1541. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:44

A8HQA9              	100.00%		H3GP82              	100.00%
A8HMD4              	100.00%		H3GUW1              	100.00%
                    	       		H3GP77              	55.08%
                    	       		H3GP84              	34.92%
                    	       		H3H9L0              	34.15%
                    	       		H3GP83              	27.21%
                    	       		H3H7C0              	14.59%
Bootstrap support for A8HQA9 as seed ortholog is 100%.
Bootstrap support for A8HMD4 as seed ortholog is 100%.
Bootstrap support for H3GP82 as seed ortholog is 87%.
Bootstrap support for H3GUW1 as seed ortholog is 77%.

Group of orthologs #1542. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:133

A8I1B6              	100.00%		H3H1L0              	100.00%
                    	       		H3H867              	68.52%
Bootstrap support for A8I1B6 as seed ortholog is 90%.
Bootstrap support for H3H1L0 as seed ortholog is 100%.

Group of orthologs #1543. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:64

A8JDA0              	100.00%		H3GEJ4              	100.00%
                    	       		H3GSR0              	12.21%
Bootstrap support for A8JDA0 as seed ortholog is 100%.
Bootstrap support for H3GEJ4 as seed ortholog is 92%.

Group of orthologs #1544. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:133

A8HXA9              	100.00%		H3G8R6              	100.00%
Bootstrap support for A8HXA9 as seed ortholog is 100%.
Bootstrap support for H3G8R6 as seed ortholog is 100%.

Group of orthologs #1545. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:133

A8IXU1              	100.00%		H3GM24              	100.00%
Bootstrap support for A8IXU1 as seed ortholog is 100%.
Bootstrap support for H3GM24 as seed ortholog is 100%.

Group of orthologs #1546. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:133

A8J5Q5              	100.00%		H3GMU8              	100.00%
Bootstrap support for A8J5Q5 as seed ortholog is 100%.
Bootstrap support for H3GMU8 as seed ortholog is 100%.

Group of orthologs #1547. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:133

A8J5A5              	100.00%		H3H0L3              	100.00%
Bootstrap support for A8J5A5 as seed ortholog is 100%.
Bootstrap support for H3H0L3 as seed ortholog is 100%.

Group of orthologs #1548. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.ramorum:133

A8J1X2              	100.00%		H3HEE5              	100.00%
Bootstrap support for A8J1X2 as seed ortholog is 100%.
Bootstrap support for H3HEE5 as seed ortholog is 100%.

Group of orthologs #1549. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.ramorum:132

A8HQM6              	100.00%		H3GCL0              	100.00%
Bootstrap support for A8HQM6 as seed ortholog is 100%.
Bootstrap support for H3GCL0 as seed ortholog is 100%.

Group of orthologs #1550. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.ramorum:132

A8IBA2              	100.00%		H3GBM2              	100.00%
Bootstrap support for A8IBA2 as seed ortholog is 100%.
Bootstrap support for H3GBM2 as seed ortholog is 100%.

Group of orthologs #1551. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.ramorum:132

A8I4Y6              	100.00%		H3GRD9              	100.00%
Bootstrap support for A8I4Y6 as seed ortholog is 100%.
Bootstrap support for H3GRD9 as seed ortholog is 100%.

Group of orthologs #1552. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.ramorum:132

A8J755              	100.00%		H3GVU0              	100.00%
Bootstrap support for A8J755 as seed ortholog is 100%.
Bootstrap support for H3GVU0 as seed ortholog is 100%.

Group of orthologs #1553. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:24

A8I372              	100.00%		H3HCA8              	100.00%
A8J1N0              	17.69%		
A8HMT9              	12.60%		
A8HQ35              	9.65%		
A8IQX3              	9.38%		
A8IQX0              	8.71%		
A8HQ26              	8.04%		
A8I3B9              	7.64%		
Bootstrap support for A8I372 as seed ortholog is 90%.
Bootstrap support for H3HCA8 as seed ortholog is 73%.
Alternative seed ortholog is H3GJ01 (24 bits away from this cluster)

Group of orthologs #1554. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8HZE6              	100.00%		H3GHR9              	100.00%
                    	       		H3GS49              	47.27%
                    	       		H3GS50              	45.16%
Bootstrap support for A8HZE6 as seed ortholog is 100%.
Bootstrap support for H3GHR9 as seed ortholog is 100%.

Group of orthologs #1555. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8J0V7              	100.00%		H3GDF7              	100.00%
                    	       		H3GZW6              	20.43%
Bootstrap support for A8J0V7 as seed ortholog is 100%.
Bootstrap support for H3GDF7 as seed ortholog is 100%.

Group of orthologs #1556. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

Q6U9W9              	100.00%		H3GFE6              	100.00%
                    	       		H3GTS8              	24.31%
Bootstrap support for Q6U9W9 as seed ortholog is 100%.
Bootstrap support for H3GFE6 as seed ortholog is 100%.

Group of orthologs #1557. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8IS22              	100.00%		H3G5I3              	100.00%
Bootstrap support for A8IS22 as seed ortholog is 100%.
Bootstrap support for H3G5I3 as seed ortholog is 100%.

Group of orthologs #1558. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8IQE3              	100.00%		H3GDP2              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for H3GDP2 as seed ortholog is 100%.

Group of orthologs #1559. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8J1L3              	100.00%		H3GZN0              	100.00%
Bootstrap support for A8J1L3 as seed ortholog is 100%.
Bootstrap support for H3GZN0 as seed ortholog is 100%.

Group of orthologs #1560. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8JFB7              	100.00%		H3GMN0              	100.00%
Bootstrap support for A8JFB7 as seed ortholog is 100%.
Bootstrap support for H3GMN0 as seed ortholog is 100%.

Group of orthologs #1561. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.ramorum:131

A8J2J5              	100.00%		H3H2R3              	100.00%
Bootstrap support for A8J2J5 as seed ortholog is 100%.
Bootstrap support for H3H2R3 as seed ortholog is 100%.

Group of orthologs #1562. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:131

Q944M8              	100.00%		H3HBE5              	100.00%
Bootstrap support for Q944M8 as seed ortholog is 98%.
Bootstrap support for H3HBE5 as seed ortholog is 100%.

Group of orthologs #1563. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:130

A8J3Q5              	100.00%		H3GN35              	100.00%
                    	       		H3H5V4              	100.00%
                    	       		H3GG96              	76.07%
                    	       		H3GU87              	53.31%
                    	       		H3H9X2              	49.03%
Bootstrap support for A8J3Q5 as seed ortholog is 100%.
Bootstrap support for H3GN35 as seed ortholog is 100%.
Bootstrap support for H3H5V4 as seed ortholog is 100%.

Group of orthologs #1564. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:68

A8IZM7              	100.00%		H3G785              	100.00%
Bootstrap support for A8IZM7 as seed ortholog is 99%.
Bootstrap support for H3G785 as seed ortholog is 99%.

Group of orthologs #1565. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:130

A8J3I2              	100.00%		H3GD40              	100.00%
Bootstrap support for A8J3I2 as seed ortholog is 100%.
Bootstrap support for H3GD40 as seed ortholog is 100%.

Group of orthologs #1566. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:41

A8IZN2              	100.00%		H3GZW9              	100.00%
Bootstrap support for A8IZN2 as seed ortholog is 100%.
Bootstrap support for H3GZW9 as seed ortholog is 98%.

Group of orthologs #1567. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.ramorum:130

A8ITZ0              	100.00%		H3HEG5              	100.00%
Bootstrap support for A8ITZ0 as seed ortholog is 100%.
Bootstrap support for H3HEG5 as seed ortholog is 100%.

Group of orthologs #1568. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8J3E5              	100.00%		H3GPK3              	100.00%
                    	       		H3GPK5              	30.68%
Bootstrap support for A8J3E5 as seed ortholog is 100%.
Bootstrap support for H3GPK3 as seed ortholog is 100%.

Group of orthologs #1569. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:40

A8HMG5              	100.00%		H3GKN7              	100.00%
Bootstrap support for A8HMG5 as seed ortholog is 100%.
Bootstrap support for H3GKN7 as seed ortholog is 74%.
Alternative seed ortholog is H3GWC9 (40 bits away from this cluster)

Group of orthologs #1570. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8IQT7              	100.00%		H3G7M5              	100.00%
Bootstrap support for A8IQT7 as seed ortholog is 100%.
Bootstrap support for H3G7M5 as seed ortholog is 100%.

Group of orthologs #1571. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8J1G4              	100.00%		H3G6F4              	100.00%
Bootstrap support for A8J1G4 as seed ortholog is 100%.
Bootstrap support for H3G6F4 as seed ortholog is 100%.

Group of orthologs #1572. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8J8R7              	100.00%		H3G937              	100.00%
Bootstrap support for A8J8R7 as seed ortholog is 100%.
Bootstrap support for H3G937 as seed ortholog is 100%.

Group of orthologs #1573. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8IYS8              	100.00%		H3GMK3              	100.00%
Bootstrap support for A8IYS8 as seed ortholog is 100%.
Bootstrap support for H3GMK3 as seed ortholog is 100%.

Group of orthologs #1574. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:129

A8JES1              	100.00%		H3G9H6              	100.00%
Bootstrap support for A8JES1 as seed ortholog is 99%.
Bootstrap support for H3G9H6 as seed ortholog is 100%.

Group of orthologs #1575. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8IWP5              	100.00%		H3GVC5              	100.00%
Bootstrap support for A8IWP5 as seed ortholog is 100%.
Bootstrap support for H3GVC5 as seed ortholog is 100%.

Group of orthologs #1576. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:129

A8JDK0              	100.00%		H3GX10              	100.00%
Bootstrap support for A8JDK0 as seed ortholog is 100%.
Bootstrap support for H3GX10 as seed ortholog is 100%.

Group of orthologs #1577. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.ramorum:18

A8JFV0              	100.00%		H3HCY7              	100.00%
Bootstrap support for A8JFV0 as seed ortholog is 100%.
Bootstrap support for H3HCY7 as seed ortholog is 67%.
Alternative seed ortholog is H3GIL4 (18 bits away from this cluster)

Group of orthologs #1578. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.ramorum:23

A8HNZ2              	100.00%		H3H7E8              	100.00%
                    	       		H3H2W5              	63.48%
                    	       		H3H4C1              	52.70%
Bootstrap support for A8HNZ2 as seed ortholog is 100%.
Bootstrap support for H3H7E8 as seed ortholog is 89%.

Group of orthologs #1579. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:128

A8IR06              	100.00%		H3GAU5              	100.00%
A8HMR3              	13.69%		
Bootstrap support for A8IR06 as seed ortholog is 99%.
Bootstrap support for H3GAU5 as seed ortholog is 100%.

Group of orthologs #1580. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:34

A8INM9              	100.00%		H3GED6              	100.00%
                    	       		H3GJY4              	30.65%
Bootstrap support for A8INM9 as seed ortholog is 90%.
Bootstrap support for H3GED6 as seed ortholog is 81%.

Group of orthologs #1581. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.ramorum:128

A8J576              	100.00%		H3G5Z9              	100.00%
A8J0V6              	11.54%		
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for H3G5Z9 as seed ortholog is 100%.

Group of orthologs #1582. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:128

A8HVG5              	100.00%		H3G6Y3              	100.00%
Bootstrap support for A8HVG5 as seed ortholog is 100%.
Bootstrap support for H3G6Y3 as seed ortholog is 100%.

Group of orthologs #1583. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.ramorum:128

A8HTH0              	100.00%		H3GWU4              	100.00%
Bootstrap support for A8HTH0 as seed ortholog is 100%.
Bootstrap support for H3GWU4 as seed ortholog is 100%.

Group of orthologs #1584. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.ramorum:128

A8IN53              	100.00%		H3GMC3              	100.00%
Bootstrap support for A8IN53 as seed ortholog is 100%.
Bootstrap support for H3GMC3 as seed ortholog is 100%.

Group of orthologs #1585. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.ramorum:128

A8JHR1              	100.00%		H3G7P4              	100.00%
Bootstrap support for A8JHR1 as seed ortholog is 100%.
Bootstrap support for H3G7P4 as seed ortholog is 100%.

Group of orthologs #1586. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.ramorum:19

A8J5V5              	100.00%		H3HAW8              	100.00%
Bootstrap support for A8J5V5 as seed ortholog is 73%.
Alternative seed ortholog is A8JBA5 (20 bits away from this cluster)
Bootstrap support for H3HAW8 as seed ortholog is 70%.
Alternative seed ortholog is H3GJ74 (19 bits away from this cluster)

Group of orthologs #1587. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.ramorum:35

A8HSC2              	100.00%		H3G6G5              	100.00%
Bootstrap support for A8HSC2 as seed ortholog is 70%.
Alternative seed ortholog is A8JBJ3 (11 bits away from this cluster)
Bootstrap support for H3G6G5 as seed ortholog is 94%.

Group of orthologs #1588. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.ramorum:127

A8J875              	100.00%		H3G5F3              	100.00%
Bootstrap support for A8J875 as seed ortholog is 100%.
Bootstrap support for H3G5F3 as seed ortholog is 100%.

Group of orthologs #1589. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.ramorum:127

A8JHG1              	100.00%		H3GD43              	100.00%
Bootstrap support for A8JHG1 as seed ortholog is 100%.
Bootstrap support for H3GD43 as seed ortholog is 100%.

Group of orthologs #1590. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.ramorum:67

A8JCE6              	100.00%		H3GTS5              	100.00%
Bootstrap support for A8JCE6 as seed ortholog is 100%.
Bootstrap support for H3GTS5 as seed ortholog is 99%.

Group of orthologs #1591. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8IAZ4              	100.00%		H3H4G7              	100.00%
                    	       		H3GB35              	58.45%
                    	       		H3GAW2              	57.04%
                    	       		H3GFV7              	45.07%
Bootstrap support for A8IAZ4 as seed ortholog is 100%.
Bootstrap support for H3H4G7 as seed ortholog is 100%.

Group of orthologs #1592. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8HSI6              	100.00%		H3G6S7              	100.00%
Bootstrap support for A8HSI6 as seed ortholog is 100%.
Bootstrap support for H3G6S7 as seed ortholog is 100%.

Group of orthologs #1593. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8IFM6              	100.00%		H3G8P4              	100.00%
Bootstrap support for A8IFM6 as seed ortholog is 100%.
Bootstrap support for H3G8P4 as seed ortholog is 100%.

Group of orthologs #1594. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8I7C2              	100.00%		H3GG87              	100.00%
Bootstrap support for A8I7C2 as seed ortholog is 100%.
Bootstrap support for H3GG87 as seed ortholog is 100%.

Group of orthologs #1595. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8HMM6              	100.00%		H3GXG3              	100.00%
Bootstrap support for A8HMM6 as seed ortholog is 100%.
Bootstrap support for H3GXG3 as seed ortholog is 100%.

Group of orthologs #1596. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8ITT0              	100.00%		H3GGV5              	100.00%
Bootstrap support for A8ITT0 as seed ortholog is 100%.
Bootstrap support for H3GGV5 as seed ortholog is 100%.

Group of orthologs #1597. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:126

A8J5G1              	100.00%		H3G9L3              	100.00%
Bootstrap support for A8J5G1 as seed ortholog is 99%.
Bootstrap support for H3G9L3 as seed ortholog is 100%.

Group of orthologs #1598. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8J7X4              	100.00%		H3G8J4              	100.00%
Bootstrap support for A8J7X4 as seed ortholog is 100%.
Bootstrap support for H3G8J4 as seed ortholog is 100%.

Group of orthologs #1599. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8J2P8              	100.00%		H3GEK5              	100.00%
Bootstrap support for A8J2P8 as seed ortholog is 100%.
Bootstrap support for H3GEK5 as seed ortholog is 100%.

Group of orthologs #1600. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8HYD5              	100.00%		H3GZT3              	100.00%
Bootstrap support for A8HYD5 as seed ortholog is 100%.
Bootstrap support for H3GZT3 as seed ortholog is 100%.

Group of orthologs #1601. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8I3W3              	100.00%		H3HDW9              	100.00%
Bootstrap support for A8I3W3 as seed ortholog is 100%.
Bootstrap support for H3HDW9 as seed ortholog is 100%.

Group of orthologs #1602. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.ramorum:126

A8J1K4              	100.00%		H3HD68              	100.00%
Bootstrap support for A8J1K4 as seed ortholog is 100%.
Bootstrap support for H3HD68 as seed ortholog is 100%.

Group of orthologs #1603. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:29

A8IJL5              	100.00%		H3GRI1              	100.00%
                    	       		H3H9P6              	42.18%
Bootstrap support for A8IJL5 as seed ortholog is 99%.
Bootstrap support for H3GRI1 as seed ortholog is 82%.

Group of orthologs #1604. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:125

A8HQN5              	100.00%		H3GJE0              	100.00%
Bootstrap support for A8HQN5 as seed ortholog is 100%.
Bootstrap support for H3GJE0 as seed ortholog is 100%.

Group of orthologs #1605. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:55

A8IKY9              	100.00%		H3G991              	100.00%
Bootstrap support for A8IKY9 as seed ortholog is 100%.
Bootstrap support for H3G991 as seed ortholog is 98%.

Group of orthologs #1606. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.ramorum:41

A8J2A1              	100.00%		H3GG07              	100.00%
Bootstrap support for A8J2A1 as seed ortholog is 81%.
Bootstrap support for H3GG07 as seed ortholog is 87%.

Group of orthologs #1607. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:125

A8IZW5              	100.00%		H3GXT3              	100.00%
Bootstrap support for A8IZW5 as seed ortholog is 100%.
Bootstrap support for H3GXT3 as seed ortholog is 100%.

Group of orthologs #1608. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:125

A8I4L4              	100.00%		H3HBL2              	100.00%
Bootstrap support for A8I4L4 as seed ortholog is 100%.
Bootstrap support for H3HBL2 as seed ortholog is 100%.

Group of orthologs #1609. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.ramorum:125

A8IYZ2              	100.00%		H3HAV5              	100.00%
Bootstrap support for A8IYZ2 as seed ortholog is 100%.
Bootstrap support for H3HAV5 as seed ortholog is 100%.

Group of orthologs #1610. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:124

A8HRZ0              	100.00%		H3GZI5              	5.88%
Q39576              	100.00%		H3G9S0              	100.00%
                    	       		H3H5I1              	5.88%
Bootstrap support for A8HRZ0 as seed ortholog is 100%.
Bootstrap support for Q39576 as seed ortholog is 100%.
Bootstrap support for H3G9S0 as seed ortholog is 100%.

Group of orthologs #1611. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:42

A8IJ64              	100.00%		H3H0X8              	100.00%
A8JE46              	64.94%		
A8IHU0              	48.66%		
Bootstrap support for A8IJ64 as seed ortholog is 100%.
Bootstrap support for H3H0X8 as seed ortholog is 86%.

Group of orthologs #1612. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:124

A8J6I7              	100.00%		H3GI59              	100.00%
                    	       		H3GBM8              	14.56%
Bootstrap support for A8J6I7 as seed ortholog is 100%.
Bootstrap support for H3GI59 as seed ortholog is 100%.

Group of orthologs #1613. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:124

A8HNX3              	100.00%		H3G946              	100.00%
Bootstrap support for A8HNX3 as seed ortholog is 100%.
Bootstrap support for H3G946 as seed ortholog is 100%.

Group of orthologs #1614. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:30

A8HZK8              	100.00%		H3GS02              	100.00%
Bootstrap support for A8HZK8 as seed ortholog is 100%.
Bootstrap support for H3GS02 as seed ortholog is 62%.
Alternative seed ortholog is H3G7S8 (30 bits away from this cluster)

Group of orthologs #1615. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:124

Q9M6B0              	100.00%		H3GCZ9              	100.00%
Bootstrap support for Q9M6B0 as seed ortholog is 100%.
Bootstrap support for H3GCZ9 as seed ortholog is 100%.

Group of orthologs #1616. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.ramorum:124

A8JDP2              	100.00%		H3HCV7              	100.00%
Bootstrap support for A8JDP2 as seed ortholog is 100%.
Bootstrap support for H3HCV7 as seed ortholog is 100%.

Group of orthologs #1617. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8HQY9              	100.00%		H3G4X3              	100.00%
Bootstrap support for A8HQY9 as seed ortholog is 100%.
Bootstrap support for H3G4X3 as seed ortholog is 100%.

Group of orthologs #1618. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8IV17              	100.00%		H3G531              	100.00%
Bootstrap support for A8IV17 as seed ortholog is 100%.
Bootstrap support for H3G531 as seed ortholog is 100%.

Group of orthologs #1619. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8IA96              	100.00%		H3GHR7              	100.00%
Bootstrap support for A8IA96 as seed ortholog is 100%.
Bootstrap support for H3GHR7 as seed ortholog is 100%.

Group of orthologs #1620. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8IQC1              	100.00%		H3GNV2              	100.00%
Bootstrap support for A8IQC1 as seed ortholog is 100%.
Bootstrap support for H3GNV2 as seed ortholog is 100%.

Group of orthologs #1621. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8INS5              	100.00%		H3GQZ9              	100.00%
Bootstrap support for A8INS5 as seed ortholog is 100%.
Bootstrap support for H3GQZ9 as seed ortholog is 100%.

Group of orthologs #1622. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8J756              	100.00%		H3GDA4              	100.00%
Bootstrap support for A8J756 as seed ortholog is 100%.
Bootstrap support for H3GDA4 as seed ortholog is 100%.

Group of orthologs #1623. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8JB15              	100.00%		H3GFX6              	100.00%
Bootstrap support for A8JB15 as seed ortholog is 100%.
Bootstrap support for H3GFX6 as seed ortholog is 100%.

Group of orthologs #1624. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8J7V2              	100.00%		H3GJ58              	100.00%
Bootstrap support for A8J7V2 as seed ortholog is 100%.
Bootstrap support for H3GJ58 as seed ortholog is 100%.

Group of orthologs #1625. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:123

A8J6F4              	100.00%		H3GR42              	100.00%
Bootstrap support for A8J6F4 as seed ortholog is 100%.
Bootstrap support for H3GR42 as seed ortholog is 100%.

Group of orthologs #1626. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:51

Q9SWH3              	100.00%		H3GKI4              	100.00%
Bootstrap support for Q9SWH3 as seed ortholog is 100%.
Bootstrap support for H3GKI4 as seed ortholog is 76%.

Group of orthologs #1627. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.ramorum:6

A8J793              	100.00%		H3HEA2              	100.00%
Bootstrap support for A8J793 as seed ortholog is 100%.
Bootstrap support for H3HEA2 as seed ortholog is 47%.
Alternative seed ortholog is H3GUA3 (6 bits away from this cluster)

Group of orthologs #1628. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.ramorum:122

A8J9A2              	100.00%		H3GYQ0              	100.00%
A8J7F3              	15.93%		H3GD16              	16.65%
A8HRL3              	14.24%		H3GV91              	16.02%
A8I6T9              	13.83%		H3GID8              	15.86%
A8JAU8              	13.69%		H3GIC1              	15.62%
A8I1C2              	13.42%		H3GM05              	13.48%
A8JHV6              	12.47%		H3GC01              	13.08%
A8IJQ8              	11.32%		H3GW28              	12.85%
A8HRY1              	10.85%		H3GLZ9              	11.34%
A8JEW5              	7.46%		H3GVQ7              	10.47%
A8J7B1              	6.78%		H3GTX6              	9.36%
                    	       		H3HBL8              	6.11%
                    	       		H3GU94              	5.63%
Bootstrap support for A8J9A2 as seed ortholog is 69%.
Alternative seed ortholog is A8HVC1 (37 bits away from this cluster)
Bootstrap support for H3GYQ0 as seed ortholog is 100%.

Group of orthologs #1629. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:122

A8IY22              	100.00%		H3GA47              	100.00%
Bootstrap support for A8IY22 as seed ortholog is 100%.
Bootstrap support for H3GA47 as seed ortholog is 100%.

Group of orthologs #1630. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:122

A8JBS2              	100.00%		H3GXE1              	100.00%
Bootstrap support for A8JBS2 as seed ortholog is 100%.
Bootstrap support for H3GXE1 as seed ortholog is 100%.

Group of orthologs #1631. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.ramorum:122

A8JHX7              	100.00%		H3GS75              	100.00%
Bootstrap support for A8JHX7 as seed ortholog is 100%.
Bootstrap support for H3GS75 as seed ortholog is 100%.

Group of orthologs #1632. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.ramorum:10

A8HQ33              	100.00%		H3GXX7              	48.78%
A8I222              	100.00%		H3GMR2              	100.00%
A8IXG0              	100.00%		H3GMQ9              	100.00%
A8ITX8              	6.75%		H3GMR1              	100.00%
A8JBK6              	6.46%		H3GMR4              	45.93%
A8JF67              	5.37%		H3GXX9              	37.07%
                    	       		H3GUT7              	34.52%
                    	       		H3GU05              	34.11%
                    	       		H3GRZ4              	34.00%
                    	       		H3GMF1              	32.79%
                    	       		H3GU04              	31.89%
                    	       		H3H5C0              	30.75%
                    	       		H3GTZ9              	29.94%
                    	       		H3GYV8              	29.84%
                    	       		H3GMF0              	27.87%
                    	       		H3GRX5              	27.70%
                    	       		H3GZ86              	25.05%
                    	       		H3GTX9              	24.64%
                    	       		H3H0I9              	24.44%
                    	       		H3GZA9              	24.34%
                    	       		H3HAZ5              	21.69%
                    	       		H3GXX4              	21.65%
                    	       		H3GCN5              	21.28%
                    	       		H3HD37              	20.80%
                    	       		H3HD36              	20.61%
                    	       		H3GJF2              	20.16%
                    	       		H3HAH9              	19.53%
                    	       		H3GLT0              	12.46%
                    	       		H3GI50              	11.71%
                    	       		H3GC06              	11.61%
                    	       		H3GIC4              	11.58%
                    	       		H3GVC6              	10.70%
                    	       		H3GVC7              	10.01%
                    	       		H3GGD5              	9.06%
                    	       		H3H924              	9.06%
                    	       		H3GJL4              	7.16%
                    	       		H3GFJ0              	6.80%
Bootstrap support for A8HQ33 as seed ortholog is 65%.
Alternative seed ortholog is A8JHZ0 (14 bits away from this cluster)
Bootstrap support for A8I222 as seed ortholog is 60%.
Alternative seed ortholog is A8JHZ0 (14 bits away from this cluster)
Bootstrap support for A8IXG0 as seed ortholog is 56%.
Alternative seed ortholog is A8JHZ0 (14 bits away from this cluster)
Bootstrap support for H3GMR2 as seed ortholog is 57%.
Alternative seed ortholog is H3GGD1 (10 bits away from this cluster)
Bootstrap support for H3GMQ9 as seed ortholog is 51%.
Alternative seed ortholog is H3GGD1 (10 bits away from this cluster)
Bootstrap support for H3GMR1 as seed ortholog is 56%.
Alternative seed ortholog is H3GGD1 (10 bits away from this cluster)

Group of orthologs #1633. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8HP31              	100.00%		H3HA69              	100.00%
                    	       		H3H9T6              	86.07%
Bootstrap support for A8HP31 as seed ortholog is 100%.
Bootstrap support for H3HA69 as seed ortholog is 100%.

Group of orthologs #1634. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8HTU4              	100.00%		H3G6N2              	100.00%
Bootstrap support for A8HTU4 as seed ortholog is 100%.
Bootstrap support for H3G6N2 as seed ortholog is 100%.

Group of orthologs #1635. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8HPN5              	100.00%		H3GCG0              	100.00%
Bootstrap support for A8HPN5 as seed ortholog is 100%.
Bootstrap support for H3GCG0 as seed ortholog is 100%.

Group of orthologs #1636. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8I797              	100.00%		H3G7G4              	100.00%
Bootstrap support for A8I797 as seed ortholog is 100%.
Bootstrap support for H3G7G4 as seed ortholog is 100%.

Group of orthologs #1637. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8ICE4              	100.00%		H3G9B7              	100.00%
Bootstrap support for A8ICE4 as seed ortholog is 100%.
Bootstrap support for H3G9B7 as seed ortholog is 100%.

Group of orthologs #1638. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8J0N3              	100.00%		H3G8T1              	100.00%
Bootstrap support for A8J0N3 as seed ortholog is 100%.
Bootstrap support for H3G8T1 as seed ortholog is 100%.

Group of orthologs #1639. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8ICE1              	100.00%		H3GS81              	100.00%
Bootstrap support for A8ICE1 as seed ortholog is 100%.
Bootstrap support for H3GS81 as seed ortholog is 100%.

Group of orthologs #1640. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8J0A9              	100.00%		H3GH43              	100.00%
Bootstrap support for A8J0A9 as seed ortholog is 100%.
Bootstrap support for H3GH43 as seed ortholog is 100%.

Group of orthologs #1641. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8IU80              	100.00%		H3GRU5              	100.00%
Bootstrap support for A8IU80 as seed ortholog is 100%.
Bootstrap support for H3GRU5 as seed ortholog is 100%.

Group of orthologs #1642. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8JBA4              	100.00%		H3GIE9              	100.00%
Bootstrap support for A8JBA4 as seed ortholog is 100%.
Bootstrap support for H3GIE9 as seed ortholog is 100%.

Group of orthologs #1643. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.ramorum:121

A8I6C7              	100.00%		H3HAR5              	100.00%
Bootstrap support for A8I6C7 as seed ortholog is 100%.
Bootstrap support for H3HAR5 as seed ortholog is 100%.

Group of orthologs #1644. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:120

A8J3L2              	100.00%		H3GY59              	100.00%
                    	       		H3GAP6              	68.56%
                    	       		H3GJX2              	53.89%
                    	       		H3G9N5              	45.21%
                    	       		H3GAP4              	35.63%
                    	       		H3H2C8              	29.64%
                    	       		H3HB03              	28.14%
                    	       		H3GD29              	27.84%
                    	       		H3GSI6              	26.35%
                    	       		H3H2D1              	24.25%
                    	       		H3H0I3              	24.25%
                    	       		H3H2D3              	24.25%
                    	       		H3H590              	23.95%
                    	       		H3GM66              	20.36%
Bootstrap support for A8J3L2 as seed ortholog is 96%.
Bootstrap support for H3GY59 as seed ortholog is 100%.

Group of orthologs #1645. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.ramorum:38

A8JB84              	100.00%		H3GC88              	100.00%
                    	       		H3HAT4              	43.22%
                    	       		H3GC86              	41.95%
                    	       		H3GC97              	41.15%
Bootstrap support for A8JB84 as seed ortholog is 61%.
Alternative seed ortholog is A8I8R5 (10 bits away from this cluster)
Bootstrap support for H3GC88 as seed ortholog is 87%.

Group of orthologs #1646. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.ramorum:33

A8HPP3              	100.00%		H3H5A3              	100.00%
A8HPN7              	83.12%		H3H811              	97.33%
Bootstrap support for A8HPP3 as seed ortholog is 60%.
Alternative seed ortholog is A8HN41 (34 bits away from this cluster)
Bootstrap support for H3H5A3 as seed ortholog is 82%.

Group of orthologs #1647. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:4

A8HY41              	100.00%		H3GFM4              	100.00%
A8HXX4              	7.67%		
Bootstrap support for A8HY41 as seed ortholog is 100%.
Bootstrap support for H3GFM4 as seed ortholog is 65%.
Alternative seed ortholog is H3GWA4 (4 bits away from this cluster)

Group of orthologs #1648. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:120

A8IIA2              	100.00%		H3G5B7              	100.00%
Bootstrap support for A8IIA2 as seed ortholog is 100%.
Bootstrap support for H3G5B7 as seed ortholog is 100%.

Group of orthologs #1649. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:120

A8IDN1              	100.00%		H3G7A3              	100.00%
Bootstrap support for A8IDN1 as seed ortholog is 99%.
Bootstrap support for H3G7A3 as seed ortholog is 100%.

Group of orthologs #1650. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:120

A8HT86              	100.00%		H3GHV0              	100.00%
Bootstrap support for A8HT86 as seed ortholog is 100%.
Bootstrap support for H3GHV0 as seed ortholog is 100%.

Group of orthologs #1651. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:120

A8IML4              	100.00%		H3GJ66              	100.00%
Bootstrap support for A8IML4 as seed ortholog is 100%.
Bootstrap support for H3GJ66 as seed ortholog is 100%.

Group of orthologs #1652. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:120

A8IP02              	100.00%		H3H0V5              	100.00%
Bootstrap support for A8IP02 as seed ortholog is 100%.
Bootstrap support for H3H0V5 as seed ortholog is 100%.

Group of orthologs #1653. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.ramorum:120

A8J9J7              	100.00%		H3GSL7              	100.00%
Bootstrap support for A8J9J7 as seed ortholog is 100%.
Bootstrap support for H3GSL7 as seed ortholog is 100%.

Group of orthologs #1654. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8HUN7              	100.00%		H3GHQ5              	100.00%
Bootstrap support for A8HUN7 as seed ortholog is 100%.
Bootstrap support for H3GHQ5 as seed ortholog is 100%.

Group of orthologs #1655. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8INQ8              	100.00%		H3GC55              	100.00%
Bootstrap support for A8INQ8 as seed ortholog is 100%.
Bootstrap support for H3GC55 as seed ortholog is 100%.

Group of orthologs #1656. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8IPC9              	100.00%		H3GC59              	100.00%
Bootstrap support for A8IPC9 as seed ortholog is 100%.
Bootstrap support for H3GC59 as seed ortholog is 100%.

Group of orthologs #1657. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8J834              	100.00%		H3G535              	100.00%
Bootstrap support for A8J834 as seed ortholog is 100%.
Bootstrap support for H3G535 as seed ortholog is 100%.

Group of orthologs #1658. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8ISS8              	100.00%		H3GJ28              	100.00%
Bootstrap support for A8ISS8 as seed ortholog is 100%.
Bootstrap support for H3GJ28 as seed ortholog is 100%.

Group of orthologs #1659. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8IXM8              	100.00%		H3GHH4              	100.00%
Bootstrap support for A8IXM8 as seed ortholog is 100%.
Bootstrap support for H3GHH4 as seed ortholog is 100%.

Group of orthologs #1660. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8J6H4              	100.00%		H3GIE0              	100.00%
Bootstrap support for A8J6H4 as seed ortholog is 100%.
Bootstrap support for H3GIE0 as seed ortholog is 100%.

Group of orthologs #1661. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.ramorum:39

A8JGV4              	100.00%		H3G9N9              	100.00%
Bootstrap support for A8JGV4 as seed ortholog is 90%.
Bootstrap support for H3G9N9 as seed ortholog is 94%.

Group of orthologs #1662. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8I446              	100.00%		H3H6X7              	100.00%
Bootstrap support for A8I446 as seed ortholog is 100%.
Bootstrap support for H3H6X7 as seed ortholog is 100%.

Group of orthologs #1663. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8J2R2              	100.00%		H3H248              	100.00%
Bootstrap support for A8J2R2 as seed ortholog is 100%.
Bootstrap support for H3H248 as seed ortholog is 100%.

Group of orthologs #1664. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 P.ramorum:48

Q27YU4              	100.00%		H3GKM5              	100.00%
Bootstrap support for Q27YU4 as seed ortholog is 90%.
Bootstrap support for H3GKM5 as seed ortholog is 95%.

Group of orthologs #1665. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8JFJ5              	100.00%		H3GV47              	100.00%
Bootstrap support for A8JFJ5 as seed ortholog is 100%.
Bootstrap support for H3GV47 as seed ortholog is 100%.

Group of orthologs #1666. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8J1A3              	100.00%		H3HCV1              	100.00%
Bootstrap support for A8J1A3 as seed ortholog is 100%.
Bootstrap support for H3HCV1 as seed ortholog is 100%.

Group of orthologs #1667. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.ramorum:119

A8J8B9              	100.00%		H3HAR2              	100.00%
Bootstrap support for A8J8B9 as seed ortholog is 100%.
Bootstrap support for H3HAR2 as seed ortholog is 100%.

Group of orthologs #1668. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.ramorum:2

A8INX4              	100.00%		H3GWV7              	100.00%
                    	       		H3GY93              	9.32%
Bootstrap support for A8INX4 as seed ortholog is 81%.
Bootstrap support for H3GWV7 as seed ortholog is 56%.
Alternative seed ortholog is H3GVY5 (2 bits away from this cluster)

Group of orthologs #1669. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:118

A8IN71              	100.00%		H3G6B5              	100.00%
Bootstrap support for A8IN71 as seed ortholog is 100%.
Bootstrap support for H3G6B5 as seed ortholog is 100%.

Group of orthologs #1670. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:118

A8ILG8              	100.00%		H3GA04              	100.00%
Bootstrap support for A8ILG8 as seed ortholog is 100%.
Bootstrap support for H3GA04 as seed ortholog is 100%.

Group of orthologs #1671. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:118

A8HVC3              	100.00%		H3GYL9              	100.00%
Bootstrap support for A8HVC3 as seed ortholog is 100%.
Bootstrap support for H3GYL9 as seed ortholog is 100%.

Group of orthologs #1672. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.ramorum:118

Q7XA07              	100.00%		H3GVF4              	100.00%
Bootstrap support for Q7XA07 as seed ortholog is 100%.
Bootstrap support for H3GVF4 as seed ortholog is 100%.

Group of orthologs #1673. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8IYV4              	100.00%		H3G748              	100.00%
                    	       		H3G749              	100.00%
                    	       		H3G5V0              	52.97%
Bootstrap support for A8IYV4 as seed ortholog is 100%.
Bootstrap support for H3G748 as seed ortholog is 100%.
Bootstrap support for H3G749 as seed ortholog is 100%.

Group of orthologs #1674. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8I3Q0              	100.00%		H3G550              	100.00%
Bootstrap support for A8I3Q0 as seed ortholog is 100%.
Bootstrap support for H3G550 as seed ortholog is 100%.

Group of orthologs #1675. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8HUP9              	100.00%		H3GEA6              	100.00%
Bootstrap support for A8HUP9 as seed ortholog is 100%.
Bootstrap support for H3GEA6 as seed ortholog is 100%.

Group of orthologs #1676. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:39

A8I2N3              	100.00%		H3GLN5              	100.00%
Bootstrap support for A8I2N3 as seed ortholog is 100%.
Bootstrap support for H3GLN5 as seed ortholog is 63%.
Alternative seed ortholog is H3GCH5 (39 bits away from this cluster)

Group of orthologs #1677. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8HT82              	100.00%		H3GUP5              	100.00%
Bootstrap support for A8HT82 as seed ortholog is 100%.
Bootstrap support for H3GUP5 as seed ortholog is 100%.

Group of orthologs #1678. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8J6S0              	100.00%		H3GGH3              	100.00%
Bootstrap support for A8J6S0 as seed ortholog is 100%.
Bootstrap support for H3GGH3 as seed ortholog is 100%.

Group of orthologs #1679. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8JGC0              	100.00%		H3GKM6              	100.00%
Bootstrap support for A8JGC0 as seed ortholog is 100%.
Bootstrap support for H3GKM6 as seed ortholog is 100%.

Group of orthologs #1680. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:68

A8JAD3              	100.00%		H3GSK1              	100.00%
Bootstrap support for A8JAD3 as seed ortholog is 100%.
Bootstrap support for H3GSK1 as seed ortholog is 97%.

Group of orthologs #1681. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.ramorum:117

A8JCE5              	100.00%		H3GY63              	100.00%
Bootstrap support for A8JCE5 as seed ortholog is 100%.
Bootstrap support for H3GY63 as seed ortholog is 100%.

Group of orthologs #1682. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:116

A8IXU5              	100.00%		H3HCM2              	100.00%
                    	       		H3GIQ4              	13.77%
                    	       		H3GG60              	6.89%
Bootstrap support for A8IXU5 as seed ortholog is 100%.
Bootstrap support for H3HCM2 as seed ortholog is 100%.

Group of orthologs #1683. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:116

A8HYW3              	100.00%		H3H479              	100.00%
Bootstrap support for A8HYW3 as seed ortholog is 100%.
Bootstrap support for H3H479 as seed ortholog is 100%.

Group of orthologs #1684. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:116

A8IMS6              	100.00%		H3GWU0              	100.00%
Bootstrap support for A8IMS6 as seed ortholog is 93%.
Bootstrap support for H3GWU0 as seed ortholog is 100%.

Group of orthologs #1685. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:22

A8JBU3              	100.00%		H3GKU1              	100.00%
Bootstrap support for A8JBU3 as seed ortholog is 100%.
Bootstrap support for H3GKU1 as seed ortholog is 69%.
Alternative seed ortholog is H3GX90 (22 bits away from this cluster)

Group of orthologs #1686. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.ramorum:116

A8JGT7              	100.00%		H3GM29              	100.00%
Bootstrap support for A8JGT7 as seed ortholog is 100%.
Bootstrap support for H3GM29 as seed ortholog is 100%.

Group of orthologs #1687. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8ICB0              	100.00%		H3GAY5              	100.00%
                    	       		H3H4T8              	100.00%
Bootstrap support for A8ICB0 as seed ortholog is 100%.
Bootstrap support for H3GAY5 as seed ortholog is 100%.
Bootstrap support for H3H4T8 as seed ortholog is 100%.

Group of orthologs #1688. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8JHR4              	100.00%		H3GBX0              	100.00%
                    	       		H3GBW9              	44.19%
Bootstrap support for A8JHR4 as seed ortholog is 100%.
Bootstrap support for H3GBX0 as seed ortholog is 100%.

Group of orthologs #1689. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

Q7XXT3              	100.00%		H3GA31              	100.00%
A8JGD1              	38.17%		
Bootstrap support for Q7XXT3 as seed ortholog is 100%.
Bootstrap support for H3GA31 as seed ortholog is 100%.

Group of orthologs #1690. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.ramorum:115

A8IWP6              	100.00%		H3H3B2              	100.00%
A8IVY8              	10.99%		
Bootstrap support for A8IWP6 as seed ortholog is 97%.
Bootstrap support for H3H3B2 as seed ortholog is 100%.

Group of orthologs #1691. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8IZB3              	100.00%		H3H419              	100.00%
A8JFV4              	8.20%		
Bootstrap support for A8IZB3 as seed ortholog is 100%.
Bootstrap support for H3H419 as seed ortholog is 100%.

Group of orthologs #1692. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8IHQ2              	100.00%		H3G6F0              	100.00%
Bootstrap support for A8IHQ2 as seed ortholog is 100%.
Bootstrap support for H3G6F0 as seed ortholog is 100%.

Group of orthologs #1693. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8IW77              	100.00%		H3G666              	100.00%
Bootstrap support for A8IW77 as seed ortholog is 100%.
Bootstrap support for H3G666 as seed ortholog is 100%.

Group of orthologs #1694. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8IU79              	100.00%		H3GID2              	100.00%
Bootstrap support for A8IU79 as seed ortholog is 100%.
Bootstrap support for H3GID2 as seed ortholog is 100%.

Group of orthologs #1695. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

Q546J6              	100.00%		H3GWS4              	100.00%
Bootstrap support for Q546J6 as seed ortholog is 100%.
Bootstrap support for H3GWS4 as seed ortholog is 100%.

Group of orthologs #1696. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.ramorum:115

A8JHV0              	100.00%		H3H7R5              	100.00%
Bootstrap support for A8JHV0 as seed ortholog is 100%.
Bootstrap support for H3H7R5 as seed ortholog is 100%.

Group of orthologs #1697. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:53

A8I424              	100.00%		H3GXB8              	100.00%
A8IFX8              	50.73%		
A8J502              	46.72%		
A8IZ39              	32.85%		
A8IUJ9              	9.67%		
A8I041              	6.20%		
Bootstrap support for A8I424 as seed ortholog is 100%.
Bootstrap support for H3GXB8 as seed ortholog is 95%.

Group of orthologs #1698. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8HQ85              	100.00%		H3GFK0              	100.00%
Bootstrap support for A8HQ85 as seed ortholog is 100%.
Bootstrap support for H3GFK0 as seed ortholog is 100%.

Group of orthologs #1699. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8IP53              	100.00%		H3G6D7              	100.00%
Bootstrap support for A8IP53 as seed ortholog is 100%.
Bootstrap support for H3G6D7 as seed ortholog is 100%.

Group of orthologs #1700. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8I3E4              	100.00%		H3GLD6              	100.00%
Bootstrap support for A8I3E4 as seed ortholog is 100%.
Bootstrap support for H3GLD6 as seed ortholog is 100%.

Group of orthologs #1701. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8IZM3              	100.00%		H3G8V1              	100.00%
Bootstrap support for A8IZM3 as seed ortholog is 100%.
Bootstrap support for H3G8V1 as seed ortholog is 100%.

Group of orthologs #1702. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8IWF5              	100.00%		H3GE58              	100.00%
Bootstrap support for A8IWF5 as seed ortholog is 100%.
Bootstrap support for H3GE58 as seed ortholog is 100%.

Group of orthologs #1703. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8J213              	100.00%		H3GHD2              	100.00%
Bootstrap support for A8J213 as seed ortholog is 100%.
Bootstrap support for H3GHD2 as seed ortholog is 100%.

Group of orthologs #1704. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:114

A8IJ31              	100.00%		H3GTA4              	100.00%
Bootstrap support for A8IJ31 as seed ortholog is 68%.
Alternative seed ortholog is A8IJP0 (53 bits away from this cluster)
Bootstrap support for H3GTA4 as seed ortholog is 100%.

Group of orthologs #1705. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.ramorum:114

A8J807              	100.00%		H3HB68              	100.00%
Bootstrap support for A8J807 as seed ortholog is 100%.
Bootstrap support for H3HB68 as seed ortholog is 100%.

Group of orthologs #1706. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.ramorum:113

A8J5T9              	100.00%		H3G911              	100.00%
                    	       		H3GU00              	11.43%
Bootstrap support for A8J5T9 as seed ortholog is 62%.
Alternative seed ortholog is A8JBC5 (9 bits away from this cluster)
Bootstrap support for H3G911 as seed ortholog is 100%.

Group of orthologs #1707. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.ramorum:113

A8HNL1              	100.00%		H3G8J2              	100.00%
Bootstrap support for A8HNL1 as seed ortholog is 80%.
Bootstrap support for H3G8J2 as seed ortholog is 100%.

Group of orthologs #1708. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.ramorum:113

A8IDD8              	100.00%		H3GGQ0              	100.00%
Bootstrap support for A8IDD8 as seed ortholog is 100%.
Bootstrap support for H3GGQ0 as seed ortholog is 100%.

Group of orthologs #1709. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.ramorum:113

A8J2L7              	100.00%		H3G919              	100.00%
Bootstrap support for A8J2L7 as seed ortholog is 100%.
Bootstrap support for H3G919 as seed ortholog is 100%.

Group of orthologs #1710. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.ramorum:113

A8JD59              	100.00%		H3G548              	100.00%
Bootstrap support for A8JD59 as seed ortholog is 100%.
Bootstrap support for H3G548 as seed ortholog is 100%.

Group of orthologs #1711. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.ramorum:113

A8IXP6              	100.00%		H3GW53              	100.00%
Bootstrap support for A8IXP6 as seed ortholog is 100%.
Bootstrap support for H3GW53 as seed ortholog is 100%.

Group of orthologs #1712. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8JBB4              	100.00%		H3GNU6              	100.00%
A8JBE2              	46.01%		H3GNU7              	59.12%
A8JBA7              	43.25%		H3GCG6              	11.88%
Bootstrap support for A8JBB4 as seed ortholog is 100%.
Bootstrap support for H3GNU6 as seed ortholog is 100%.

Group of orthologs #1713. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8ISE1              	100.00%		H3GGG7              	100.00%
                    	       		H3GG89              	54.00%
                    	       		H3H6U6              	33.27%
Bootstrap support for A8ISE1 as seed ortholog is 100%.
Bootstrap support for H3GGG7 as seed ortholog is 100%.

Group of orthologs #1714. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8IQF3              	100.00%		H3GM89              	100.00%
                    	       		H3H2E5              	8.16%
Bootstrap support for A8IQF3 as seed ortholog is 100%.
Bootstrap support for H3GM89 as seed ortholog is 100%.

Group of orthologs #1715. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8HSJ0              	100.00%		H3G809              	100.00%
Bootstrap support for A8HSJ0 as seed ortholog is 100%.
Bootstrap support for H3G809 as seed ortholog is 100%.

Group of orthologs #1716. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8I949              	100.00%		H3GAM8              	100.00%
Bootstrap support for A8I949 as seed ortholog is 100%.
Bootstrap support for H3GAM8 as seed ortholog is 100%.

Group of orthologs #1717. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8I4U4              	100.00%		H3GEQ7              	100.00%
Bootstrap support for A8I4U4 as seed ortholog is 100%.
Bootstrap support for H3GEQ7 as seed ortholog is 100%.

Group of orthologs #1718. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8IE04              	100.00%		H3GDR6              	100.00%
Bootstrap support for A8IE04 as seed ortholog is 100%.
Bootstrap support for H3GDR6 as seed ortholog is 100%.

Group of orthologs #1719. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.ramorum:112

A8J2V4              	100.00%		H3G705              	100.00%
Bootstrap support for A8J2V4 as seed ortholog is 100%.
Bootstrap support for H3G705 as seed ortholog is 100%.

Group of orthologs #1720. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8J2G0              	100.00%		H3GZZ5              	100.00%
A8J0R9              	72.96%		
A8HNV8              	67.38%		
A8HNW2              	66.95%		
A8HNV6              	64.16%		
A8HPI9              	63.52%		
A8I3L6              	63.09%		
A8I2W8              	61.16%		
A8JBS1              	59.44%		
A8HRY6              	59.23%		
A8JGI3              	58.15%		
A8JGQ5              	52.79%		
A8JDI4              	51.72%		
A8J9Z4              	51.50%		
A8JGV2              	48.93%		
A8J0S4              	46.57%		
A8HRJ2              	44.42%		
A8IKH9              	35.19%		
A8ITN3              	34.98%		
A8JAU0              	12.02%		
Bootstrap support for A8J2G0 as seed ortholog is 100%.
Bootstrap support for H3GZZ5 as seed ortholog is 100%.

Group of orthologs #1721. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.ramorum:10

A8JGY1              	100.00%		H3GHZ1              	100.00%
                    	       		H3GCV3              	58.43%
                    	       		H3GMZ5              	6.93%
Bootstrap support for A8JGY1 as seed ortholog is 96%.
Bootstrap support for H3GHZ1 as seed ortholog is 61%.
Alternative seed ortholog is H3GZL2 (10 bits away from this cluster)

Group of orthologs #1722. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8HQG5              	100.00%		H3GEJ9              	100.00%
Bootstrap support for A8HQG5 as seed ortholog is 100%.
Bootstrap support for H3GEJ9 as seed ortholog is 100%.

Group of orthologs #1723. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8HQL2              	100.00%		H3GMR0              	100.00%
Bootstrap support for A8HQL2 as seed ortholog is 100%.
Bootstrap support for H3GMR0 as seed ortholog is 100%.

Group of orthologs #1724. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8IZ36              	100.00%		H3G844              	100.00%
Bootstrap support for A8IZ36 as seed ortholog is 100%.
Bootstrap support for H3G844 as seed ortholog is 100%.

Group of orthologs #1725. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8HYF1              	100.00%		H3GNS2              	100.00%
Bootstrap support for A8HYF1 as seed ortholog is 100%.
Bootstrap support for H3GNS2 as seed ortholog is 100%.

Group of orthologs #1726. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8I3I3              	100.00%		H3GS67              	100.00%
Bootstrap support for A8I3I3 as seed ortholog is 100%.
Bootstrap support for H3GS67 as seed ortholog is 100%.

Group of orthologs #1727. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8JAW5              	100.00%		H3G5W2              	100.00%
Bootstrap support for A8JAW5 as seed ortholog is 100%.
Bootstrap support for H3G5W2 as seed ortholog is 100%.

Group of orthologs #1728. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:53

A8J2F0              	100.00%		H3GJ64              	100.00%
Bootstrap support for A8J2F0 as seed ortholog is 99%.
Bootstrap support for H3GJ64 as seed ortholog is 99%.

Group of orthologs #1729. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.ramorum:111

A8J6Z1              	100.00%		H3GGY8              	100.00%
Bootstrap support for A8J6Z1 as seed ortholog is 73%.
Alternative seed ortholog is A8JAL6 (20 bits away from this cluster)
Bootstrap support for H3GGY8 as seed ortholog is 100%.

Group of orthologs #1730. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.ramorum:111

A8J8V1              	100.00%		H3H1G3              	100.00%
Bootstrap support for A8J8V1 as seed ortholog is 100%.
Bootstrap support for H3H1G3 as seed ortholog is 100%.

Group of orthologs #1731. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.ramorum:110

A8I3Q3              	100.00%		H3G8N4              	100.00%
Bootstrap support for A8I3Q3 as seed ortholog is 100%.
Bootstrap support for H3G8N4 as seed ortholog is 100%.

Group of orthologs #1732. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.ramorum:110

A8HQJ0              	100.00%		H3GE49              	100.00%
Bootstrap support for A8HQJ0 as seed ortholog is 100%.
Bootstrap support for H3GE49 as seed ortholog is 100%.

Group of orthologs #1733. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.ramorum:110

A8J0E8              	100.00%		H3H0P5              	100.00%
Bootstrap support for A8J0E8 as seed ortholog is 100%.
Bootstrap support for H3H0P5 as seed ortholog is 100%.

Group of orthologs #1734. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:40

A8HVE3              	100.00%		H3GDC8              	100.00%
A8HVV8              	21.75%		H3GDC6              	80.25%
A8ITL9              	5.37%		H3GDC4              	31.60%
                    	       		H3GDC5              	14.35%
                    	       		H3GDC2              	13.72%
                    	       		H3GDC1              	13.31%
                    	       		H3GDC3              	13.10%
                    	       		H3GF14              	9.56%
                    	       		H3GD98              	9.36%
                    	       		H3H2S5              	8.73%
                    	       		H3GD97              	8.32%
                    	       		H3GD91              	7.69%
                    	       		H3GG92              	7.28%
                    	       		H3H8B5              	7.28%
                    	       		H3GDA0              	6.65%
                    	       		H3H2S3              	6.44%
                    	       		H3H2S6              	6.44%
                    	       		H3GGQ5              	6.03%
                    	       		H3H2S4              	6.03%
                    	       		H3GF15              	5.41%
Bootstrap support for A8HVE3 as seed ortholog is 100%.
Bootstrap support for H3GDC8 as seed ortholog is 88%.

Group of orthologs #1735. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:57

A8IT96              	100.00%		H3GDD7              	100.00%
                    	       		H3GDD8              	98.53%
                    	       		H3GDB9              	8.26%
Bootstrap support for A8IT96 as seed ortholog is 100%.
Bootstrap support for H3GDD7 as seed ortholog is 92%.

Group of orthologs #1736. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.ramorum:109

A8J1H6              	100.00%		H3GCE3              	100.00%
A8J9S9              	18.71%		H3GCE4              	70.16%
Bootstrap support for A8J1H6 as seed ortholog is 79%.
Bootstrap support for H3GCE3 as seed ortholog is 100%.

Group of orthologs #1737. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:109

A8HYW8              	100.00%		H3GQU0              	100.00%
                    	       		H3H4K5              	100.00%
Bootstrap support for A8HYW8 as seed ortholog is 100%.
Bootstrap support for H3GQU0 as seed ortholog is 100%.
Bootstrap support for H3H4K5 as seed ortholog is 100%.

Group of orthologs #1738. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:109

A8HZ87              	100.00%		H3G8L4              	100.00%
Bootstrap support for A8HZ87 as seed ortholog is 100%.
Bootstrap support for H3G8L4 as seed ortholog is 100%.

Group of orthologs #1739. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.ramorum:109

A8JH49              	100.00%		H3G5H3              	100.00%
Bootstrap support for A8JH49 as seed ortholog is 86%.
Bootstrap support for H3G5H3 as seed ortholog is 100%.

Group of orthologs #1740. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:19

A8I3J7              	100.00%		H3H0W4              	100.00%
Bootstrap support for A8I3J7 as seed ortholog is 100%.
Bootstrap support for H3H0W4 as seed ortholog is 71%.
Alternative seed ortholog is H3GCZ2 (19 bits away from this cluster)

Group of orthologs #1741. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:109

A8IT97              	100.00%		H3GYK3              	100.00%
Bootstrap support for A8IT97 as seed ortholog is 100%.
Bootstrap support for H3GYK3 as seed ortholog is 100%.

Group of orthologs #1742. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.ramorum:23

A8JGU6              	100.00%		H3GHE5              	100.00%
Bootstrap support for A8JGU6 as seed ortholog is 80%.
Bootstrap support for H3GHE5 as seed ortholog is 79%.

Group of orthologs #1743. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.ramorum:109

A8J6H6              	100.00%		H3GVJ5              	100.00%
Bootstrap support for A8J6H6 as seed ortholog is 100%.
Bootstrap support for H3GVJ5 as seed ortholog is 100%.

Group of orthologs #1744. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8J1F9              	100.00%		H3G9H4              	100.00%
                    	       		H3G8R1              	48.37%
Bootstrap support for A8J1F9 as seed ortholog is 100%.
Bootstrap support for H3G9H4 as seed ortholog is 100%.

Group of orthologs #1745. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8HM95              	100.00%		H3GBR8              	100.00%
Bootstrap support for A8HM95 as seed ortholog is 100%.
Bootstrap support for H3GBR8 as seed ortholog is 100%.

Group of orthologs #1746. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8IV01              	100.00%		H3G7V4              	100.00%
Bootstrap support for A8IV01 as seed ortholog is 100%.
Bootstrap support for H3G7V4 as seed ortholog is 100%.

Group of orthologs #1747. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8IGB6              	100.00%		H3GFD9              	100.00%
Bootstrap support for A8IGB6 as seed ortholog is 100%.
Bootstrap support for H3GFD9 as seed ortholog is 100%.

Group of orthologs #1748. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8IUW8              	100.00%		H3GFM2              	100.00%
Bootstrap support for A8IUW8 as seed ortholog is 100%.
Bootstrap support for H3GFM2 as seed ortholog is 100%.

Group of orthologs #1749. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8IUS6              	100.00%		H3GGE1              	100.00%
Bootstrap support for A8IUS6 as seed ortholog is 100%.
Bootstrap support for H3GGE1 as seed ortholog is 100%.

Group of orthologs #1750. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8IYA5              	100.00%		H3GEY7              	100.00%
Bootstrap support for A8IYA5 as seed ortholog is 100%.
Bootstrap support for H3GEY7 as seed ortholog is 100%.

Group of orthologs #1751. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8IWL1              	100.00%		H3GT45              	100.00%
Bootstrap support for A8IWL1 as seed ortholog is 100%.
Bootstrap support for H3GT45 as seed ortholog is 100%.

Group of orthologs #1752. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8JCS9              	100.00%		H3GGY1              	100.00%
Bootstrap support for A8JCS9 as seed ortholog is 100%.
Bootstrap support for H3GGY1 as seed ortholog is 100%.

Group of orthologs #1753. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.ramorum:108

A8J028              	100.00%		H3GZL1              	100.00%
Bootstrap support for A8J028 as seed ortholog is 100%.
Bootstrap support for H3GZL1 as seed ortholog is 100%.

Group of orthologs #1754. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:61

A8JFS6              	100.00%		H3HBB0              	100.00%
                    	       		H3GE17              	36.66%
Bootstrap support for A8JFS6 as seed ortholog is 100%.
Bootstrap support for H3HBB0 as seed ortholog is 95%.

Group of orthologs #1755. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:107

A8HR64              	100.00%		H3GAJ6              	100.00%
Bootstrap support for A8HR64 as seed ortholog is 100%.
Bootstrap support for H3GAJ6 as seed ortholog is 100%.

Group of orthologs #1756. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:40

A8HMH1              	100.00%		H3GDE8              	100.00%
Bootstrap support for A8HMH1 as seed ortholog is 100%.
Bootstrap support for H3GDE8 as seed ortholog is 61%.
Alternative seed ortholog is H3H5E8 (40 bits away from this cluster)

Group of orthologs #1757. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.ramorum:56

A8J564              	100.00%		H3GES3              	100.00%
Bootstrap support for A8J564 as seed ortholog is 39%.
Alternative seed ortholog is A8INI0 (4 bits away from this cluster)
Bootstrap support for H3GES3 as seed ortholog is 89%.

Group of orthologs #1758. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:107

A8JA11              	100.00%		H3GGZ6              	100.00%
Bootstrap support for A8JA11 as seed ortholog is 100%.
Bootstrap support for H3GGZ6 as seed ortholog is 100%.

Group of orthologs #1759. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.ramorum:107

A8J5N9              	100.00%		H3H058              	100.00%
Bootstrap support for A8J5N9 as seed ortholog is 100%.
Bootstrap support for H3H058 as seed ortholog is 100%.

Group of orthologs #1760. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8HQ58              	100.00%		H3GB48              	100.00%
                    	       		H3H7S5              	45.35%
Bootstrap support for A8HQ58 as seed ortholog is 100%.
Bootstrap support for H3GB48 as seed ortholog is 100%.

Group of orthologs #1761. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:54

Q2HWK7              	100.00%		H3G8F3              	100.00%
                    	       		H3H6R0              	93.13%
Bootstrap support for Q2HWK7 as seed ortholog is 100%.
Bootstrap support for H3G8F3 as seed ortholog is 83%.

Group of orthologs #1762. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:22

A8I0E2              	100.00%		H3G542              	100.00%
Bootstrap support for A8I0E2 as seed ortholog is 99%.
Bootstrap support for H3G542 as seed ortholog is 95%.

Group of orthologs #1763. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8HRP7              	100.00%		H3GA26              	100.00%
Bootstrap support for A8HRP7 as seed ortholog is 100%.
Bootstrap support for H3GA26 as seed ortholog is 100%.

Group of orthologs #1764. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8IL88              	100.00%		H3G7M2              	100.00%
Bootstrap support for A8IL88 as seed ortholog is 100%.
Bootstrap support for H3G7M2 as seed ortholog is 100%.

Group of orthologs #1765. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:14

A8HZ94              	100.00%		H3GI84              	100.00%
Bootstrap support for A8HZ94 as seed ortholog is 100%.
Bootstrap support for H3GI84 as seed ortholog is 67%.
Alternative seed ortholog is H3H0U7 (14 bits away from this cluster)

Group of orthologs #1766. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:12

A8HWH9              	100.00%		H3GUD3              	100.00%
Bootstrap support for A8HWH9 as seed ortholog is 100%.
Bootstrap support for H3GUD3 as seed ortholog is 57%.
Alternative seed ortholog is H3GI52 (12 bits away from this cluster)

Group of orthologs #1767. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8J8P4              	100.00%		H3G9V9              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for H3G9V9 as seed ortholog is 100%.

Group of orthologs #1768. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.ramorum:34

A8J121              	100.00%		H3GP66              	100.00%
Bootstrap support for A8J121 as seed ortholog is 68%.
Alternative seed ortholog is A8J281 (25 bits away from this cluster)
Bootstrap support for H3GP66 as seed ortholog is 84%.

Group of orthologs #1769. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8J9L3              	100.00%		H3GHS4              	100.00%
Bootstrap support for A8J9L3 as seed ortholog is 100%.
Bootstrap support for H3GHS4 as seed ortholog is 100%.

Group of orthologs #1770. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8J2X6              	100.00%		H3GNK8              	100.00%
Bootstrap support for A8J2X6 as seed ortholog is 100%.
Bootstrap support for H3GNK8 as seed ortholog is 100%.

Group of orthologs #1771. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.ramorum:106

A8JFH5              	100.00%		H3GGR7              	100.00%
Bootstrap support for A8JFH5 as seed ortholog is 100%.
Bootstrap support for H3GGR7 as seed ortholog is 100%.

Group of orthologs #1772. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:106

A8J6G6              	100.00%		H3GY17              	100.00%
Bootstrap support for A8J6G6 as seed ortholog is 94%.
Bootstrap support for H3GY17 as seed ortholog is 100%.

Group of orthologs #1773. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.ramorum:105

A8IP68              	100.00%		H3GE97              	100.00%
A8IYA8              	9.82%		H3GE96              	23.42%
A8J3J2              	6.55%		H3HB55              	22.15%
                    	       		H3GE95              	20.25%
Bootstrap support for A8IP68 as seed ortholog is 61%.
Alternative seed ortholog is A8IYH3 (9 bits away from this cluster)
Bootstrap support for H3GE97 as seed ortholog is 100%.

Group of orthologs #1774. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:105

A8IR93              	100.00%		H3GHL0              	100.00%
A8JGE5              	13.11%		
Bootstrap support for A8IR93 as seed ortholog is 100%.
Bootstrap support for H3GHL0 as seed ortholog is 100%.

Group of orthologs #1775. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:105

A8HVZ9              	100.00%		H3GY73              	100.00%
Bootstrap support for A8HVZ9 as seed ortholog is 100%.
Bootstrap support for H3GY73 as seed ortholog is 100%.

Group of orthologs #1776. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:105

A8IPU0              	100.00%		H3GNM2              	100.00%
Bootstrap support for A8IPU0 as seed ortholog is 100%.
Bootstrap support for H3GNM2 as seed ortholog is 100%.

Group of orthologs #1777. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 P.ramorum:16

O64980              	100.00%		H3G5G2              	100.00%
Bootstrap support for O64980 as seed ortholog is 93%.
Bootstrap support for H3G5G2 as seed ortholog is 79%.

Group of orthologs #1778. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.ramorum:105

A8J3E3              	100.00%		H3GQ99              	100.00%
Bootstrap support for A8J3E3 as seed ortholog is 100%.
Bootstrap support for H3GQ99 as seed ortholog is 100%.

Group of orthologs #1779. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8IDS5              	100.00%		H3GKJ3              	100.00%
                    	       		H3GEL0              	19.18%
Bootstrap support for A8IDS5 as seed ortholog is 100%.
Bootstrap support for H3GKJ3 as seed ortholog is 100%.

Group of orthologs #1780. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.ramorum:104

A8JFB0              	100.00%		H3G6G2              	100.00%
                    	       		H3GB26              	100.00%
Bootstrap support for A8JFB0 as seed ortholog is 82%.
Bootstrap support for H3G6G2 as seed ortholog is 100%.
Bootstrap support for H3GB26 as seed ortholog is 100%.

Group of orthologs #1781. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.ramorum:37

A8HWG8              	100.00%		H3HAS1              	100.00%
                    	       		H3HDE3              	17.50%
Bootstrap support for A8HWG8 as seed ortholog is 62%.
Alternative seed ortholog is A8JHG0 (10 bits away from this cluster)
Bootstrap support for H3HAS1 as seed ortholog is 84%.

Group of orthologs #1782. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8HWZ6              	100.00%		H3G8X3              	100.00%
Bootstrap support for A8HWZ6 as seed ortholog is 100%.
Bootstrap support for H3G8X3 as seed ortholog is 100%.

Group of orthologs #1783. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.ramorum:57

A8JFI7              	100.00%		H3G692              	100.00%
Bootstrap support for A8JFI7 as seed ortholog is 85%.
Bootstrap support for H3G692 as seed ortholog is 96%.

Group of orthologs #1784. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.ramorum:104

A8JH05              	100.00%		H3G770              	100.00%
Bootstrap support for A8JH05 as seed ortholog is 56%.
Alternative seed ortholog is A8I7Q4 (3 bits away from this cluster)
Bootstrap support for H3G770 as seed ortholog is 100%.

Group of orthologs #1785. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8JGF9              	100.00%		H3GBM5              	100.00%
Bootstrap support for A8JGF9 as seed ortholog is 100%.
Bootstrap support for H3GBM5 as seed ortholog is 100%.

Group of orthologs #1786. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:104

A8JBV9              	100.00%		H3GLQ5              	100.00%
Bootstrap support for A8JBV9 as seed ortholog is 87%.
Bootstrap support for H3GLQ5 as seed ortholog is 100%.

Group of orthologs #1787. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8IDY8              	100.00%		H3HBV4              	100.00%
Bootstrap support for A8IDY8 as seed ortholog is 100%.
Bootstrap support for H3HBV4 as seed ortholog is 100%.

Group of orthologs #1788. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8JF73              	100.00%		H3GV06              	100.00%
Bootstrap support for A8JF73 as seed ortholog is 100%.
Bootstrap support for H3GV06 as seed ortholog is 100%.

Group of orthologs #1789. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8JAF5              	100.00%		H3H1H4              	100.00%
Bootstrap support for A8JAF5 as seed ortholog is 100%.
Bootstrap support for H3H1H4 as seed ortholog is 100%.

Group of orthologs #1790. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.ramorum:104

A8JC58              	100.00%		H3HE08              	100.00%
Bootstrap support for A8JC58 as seed ortholog is 100%.
Bootstrap support for H3HE08 as seed ortholog is 100%.

Group of orthologs #1791. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

A8J2M3              	100.00%		H3GL29              	100.00%
A8JDZ4              	67.34%		H3H6H7              	71.84%
                    	       		H3GL27              	36.05%
Bootstrap support for A8J2M3 as seed ortholog is 100%.
Bootstrap support for H3GL29 as seed ortholog is 100%.

Group of orthologs #1792. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

A8HM49              	100.00%		H3GC74              	100.00%
                    	       		H3GJH8              	24.02%
Bootstrap support for A8HM49 as seed ortholog is 100%.
Bootstrap support for H3GC74 as seed ortholog is 100%.

Group of orthologs #1793. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.ramorum:37

Q6IET4              	100.00%		H3GKD8              	100.00%
                    	       		H3GW91              	56.41%
Bootstrap support for Q6IET4 as seed ortholog is 94%.
Bootstrap support for H3GKD8 as seed ortholog is 98%.

Group of orthologs #1794. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.ramorum:17

A8JH55              	100.00%		H3GYB0              	100.00%
                    	       		H3H6X3              	39.32%
Bootstrap support for A8JH55 as seed ortholog is 50%.
Alternative seed ortholog is A8IFL6 (12 bits away from this cluster)
Bootstrap support for H3GYB0 as seed ortholog is 51%.
Alternative seed ortholog is H3GQG0 (17 bits away from this cluster)

Group of orthologs #1795. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

A8J9U2              	100.00%		H3HD50              	100.00%
A8IS93              	7.66%		
Bootstrap support for A8J9U2 as seed ortholog is 100%.
Bootstrap support for H3HD50 as seed ortholog is 100%.

Group of orthologs #1796. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

A8HMG8              	100.00%		H3GXC2              	100.00%
Bootstrap support for A8HMG8 as seed ortholog is 100%.
Bootstrap support for H3GXC2 as seed ortholog is 100%.

Group of orthologs #1797. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.ramorum:103

A8HQ36              	100.00%		H3GVL8              	100.00%
Bootstrap support for A8HQ36 as seed ortholog is 70%.
Alternative seed ortholog is A8IUB5 (29 bits away from this cluster)
Bootstrap support for H3GVL8 as seed ortholog is 100%.

Group of orthologs #1798. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

Q8GUQ9              	100.00%		H3G589              	100.00%
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.
Bootstrap support for H3G589 as seed ortholog is 100%.

Group of orthologs #1799. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

A8IIH0              	100.00%		H3H5V2              	100.00%
Bootstrap support for A8IIH0 as seed ortholog is 100%.
Bootstrap support for H3H5V2 as seed ortholog is 100%.

Group of orthologs #1800. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.ramorum:103

A8JGX7              	100.00%		H3GTA3              	100.00%
Bootstrap support for A8JGX7 as seed ortholog is 100%.
Bootstrap support for H3GTA3 as seed ortholog is 100%.

Group of orthologs #1801. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:103

Q6UKY4              	100.00%		H3HBE8              	100.00%
Bootstrap support for Q6UKY4 as seed ortholog is 99%.
Bootstrap support for H3HBE8 as seed ortholog is 100%.

Group of orthologs #1802. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:49

A8IA94              	100.00%		H3GEP4              	100.00%
                    	       		H3H7Q2              	100.00%
                    	       		H3GEP7              	95.66%
                    	       		H3GEQ0              	31.08%
                    	       		H3GEP3              	28.65%
                    	       		H3H7Q3              	26.04%
                    	       		H3GEQ4              	25.69%
                    	       		H3GEQ1              	21.35%
Bootstrap support for A8IA94 as seed ortholog is 100%.
Bootstrap support for H3GEP4 as seed ortholog is 92%.
Bootstrap support for H3H7Q2 as seed ortholog is 92%.

Group of orthologs #1803. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8J652              	100.00%		H3GTM6              	100.00%
                    	       		H3GTM5              	53.45%
                    	       		H3GMT1              	8.91%
                    	       		H3GMT0              	7.35%
                    	       		H3GMS8              	6.90%
Bootstrap support for A8J652 as seed ortholog is 100%.
Bootstrap support for H3GTM6 as seed ortholog is 100%.

Group of orthologs #1804. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8HU61              	100.00%		H3GZ79              	100.00%
                    	       		H3H6Q0              	57.04%
                    	       		H3H4H7              	52.93%
Bootstrap support for A8HU61 as seed ortholog is 100%.
Bootstrap support for H3GZ79 as seed ortholog is 100%.

Group of orthologs #1805. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8IAG8              	100.00%		H3GKQ0              	100.00%
                    	       		H3HA78              	100.00%
Bootstrap support for A8IAG8 as seed ortholog is 100%.
Bootstrap support for H3GKQ0 as seed ortholog is 100%.
Bootstrap support for H3HA78 as seed ortholog is 100%.

Group of orthologs #1806. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.ramorum:102

A8J778              	100.00%		H3GCA8              	100.00%
A8HXE1              	6.70%		
Bootstrap support for A8J778 as seed ortholog is 81%.
Bootstrap support for H3GCA8 as seed ortholog is 100%.

Group of orthologs #1807. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8JFE1              	100.00%		H3GFP5              	100.00%
                    	       		H3G4Y0              	15.15%
Bootstrap support for A8JFE1 as seed ortholog is 100%.
Bootstrap support for H3GFP5 as seed ortholog is 100%.

Group of orthologs #1808. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:45

A8IQ95              	100.00%		H3G7N5              	100.00%
Bootstrap support for A8IQ95 as seed ortholog is 100%.
Bootstrap support for H3G7N5 as seed ortholog is 94%.

Group of orthologs #1809. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8I6D1              	100.00%		H3GGX7              	100.00%
Bootstrap support for A8I6D1 as seed ortholog is 100%.
Bootstrap support for H3GGX7 as seed ortholog is 100%.

Group of orthologs #1810. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8HZK6              	100.00%		H3GPZ1              	100.00%
Bootstrap support for A8HZK6 as seed ortholog is 100%.
Bootstrap support for H3GPZ1 as seed ortholog is 100%.

Group of orthologs #1811. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8J499              	100.00%		H3G7B1              	100.00%
Bootstrap support for A8J499 as seed ortholog is 100%.
Bootstrap support for H3G7B1 as seed ortholog is 100%.

Group of orthologs #1812. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8JB74              	100.00%		H3G7Y4              	100.00%
Bootstrap support for A8JB74 as seed ortholog is 100%.
Bootstrap support for H3G7Y4 as seed ortholog is 100%.

Group of orthologs #1813. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8IM89              	100.00%		H3HBD3              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for H3HBD3 as seed ortholog is 100%.

Group of orthologs #1814. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.ramorum:102

A8JCP0              	100.00%		H3H1K0              	100.00%
Bootstrap support for A8JCP0 as seed ortholog is 100%.
Bootstrap support for H3H1K0 as seed ortholog is 100%.

Group of orthologs #1815. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:39

A8I1R3              	100.00%		H3GM16              	100.00%
Bootstrap support for A8I1R3 as seed ortholog is 100%.
Bootstrap support for H3GM16 as seed ortholog is 84%.

Group of orthologs #1816. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:4

A8IKG9              	100.00%		H3GPK6              	100.00%
Bootstrap support for A8IKG9 as seed ortholog is 100%.
Bootstrap support for H3GPK6 as seed ortholog is 49%.
Alternative seed ortholog is H3GQ64 (4 bits away from this cluster)

Group of orthologs #1817. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:101

A8IWS2              	100.00%		H3GTE9              	100.00%
Bootstrap support for A8IWS2 as seed ortholog is 100%.
Bootstrap support for H3GTE9 as seed ortholog is 100%.

Group of orthologs #1818. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:101

A8IL75              	100.00%		H3H2Z2              	100.00%
Bootstrap support for A8IL75 as seed ortholog is 100%.
Bootstrap support for H3H2Z2 as seed ortholog is 100%.

Group of orthologs #1819. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:101

A8J237              	100.00%		H3H4G3              	100.00%
Bootstrap support for A8J237 as seed ortholog is 100%.
Bootstrap support for H3H4G3 as seed ortholog is 100%.

Group of orthologs #1820. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.ramorum:101

A8IUM9              	100.00%		H3HAY4              	100.00%
Bootstrap support for A8IUM9 as seed ortholog is 100%.
Bootstrap support for H3HAY4 as seed ortholog is 100%.

Group of orthologs #1821. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:101

A8JBF2              	100.00%		H3HBR2              	100.00%
Bootstrap support for A8JBF2 as seed ortholog is 95%.
Bootstrap support for H3HBR2 as seed ortholog is 100%.

Group of orthologs #1822. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:100

A8IGB8              	100.00%		H3GLP9              	100.00%
Bootstrap support for A8IGB8 as seed ortholog is 100%.
Bootstrap support for H3GLP9 as seed ortholog is 100%.

Group of orthologs #1823. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:100

A8IY09              	100.00%		H3GGU8              	100.00%
Bootstrap support for A8IY09 as seed ortholog is 100%.
Bootstrap support for H3GGU8 as seed ortholog is 100%.

Group of orthologs #1824. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:100

A8JG36              	100.00%		H3G6N9              	100.00%
Bootstrap support for A8JG36 as seed ortholog is 100%.
Bootstrap support for H3G6N9 as seed ortholog is 100%.

Group of orthologs #1825. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:100

A8I8Z1              	100.00%		H3H5S3              	100.00%
Bootstrap support for A8I8Z1 as seed ortholog is 100%.
Bootstrap support for H3H5S3 as seed ortholog is 100%.

Group of orthologs #1826. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:100

A8J903              	100.00%		H3GKR1              	100.00%
Bootstrap support for A8J903 as seed ortholog is 100%.
Bootstrap support for H3GKR1 as seed ortholog is 100%.

Group of orthologs #1827. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.ramorum:100

A8J266              	100.00%		H3HCS3              	100.00%
Bootstrap support for A8J266 as seed ortholog is 100%.
Bootstrap support for H3HCS3 as seed ortholog is 100%.

Group of orthologs #1828. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:99

A8J2C6              	100.00%		H3GMS4              	100.00%
A8J2C7              	35.52%		H3GR06              	16.42%
A8IS80              	11.14%		H3GHB2              	12.28%
A8HNM7              	10.53%		H3GQE9              	12.00%
A8IX93              	6.70%		H3H377              	11.49%
                    	       		H3GDN9              	7.96%
                    	       		H3GY13              	6.73%
Bootstrap support for A8J2C6 as seed ortholog is 65%.
Alternative seed ortholog is A8J2S6 (44 bits away from this cluster)
Bootstrap support for H3GMS4 as seed ortholog is 100%.

Group of orthologs #1829. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:99

A8IFE6              	100.00%		H3G5D0              	100.00%
Bootstrap support for A8IFE6 as seed ortholog is 100%.
Bootstrap support for H3G5D0 as seed ortholog is 100%.

Group of orthologs #1830. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:99

A8ICQ5              	100.00%		H3GY71              	100.00%
Bootstrap support for A8ICQ5 as seed ortholog is 100%.
Bootstrap support for H3GY71 as seed ortholog is 100%.

Group of orthologs #1831. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:99

A8JHU2              	100.00%		H3G707              	100.00%
Bootstrap support for A8JHU2 as seed ortholog is 100%.
Bootstrap support for H3G707 as seed ortholog is 100%.

Group of orthologs #1832. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:22

A8IU01              	100.00%		H3GVE4              	100.00%
Bootstrap support for A8IU01 as seed ortholog is 100%.
Bootstrap support for H3GVE4 as seed ortholog is 74%.
Alternative seed ortholog is H3H395 (22 bits away from this cluster)

Group of orthologs #1833. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:99

A8J731              	100.00%		H3GKZ8              	100.00%
Bootstrap support for A8J731 as seed ortholog is 100%.
Bootstrap support for H3GKZ8 as seed ortholog is 100%.

Group of orthologs #1834. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.ramorum:37

Q9SWQ6              	100.00%		H3G807              	100.00%
Bootstrap support for Q9SWQ6 as seed ortholog is 57%.
Alternative seed ortholog is A8IY95 (5 bits away from this cluster)
Bootstrap support for H3G807 as seed ortholog is 97%.

Group of orthologs #1835. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.ramorum:99

A8HQM9              	100.00%		H3HDA8              	100.00%
Bootstrap support for A8HQM9 as seed ortholog is 100%.
Bootstrap support for H3HDA8 as seed ortholog is 100%.

Group of orthologs #1836. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.ramorum:98

A8J139              	100.00%		H3GL40              	100.00%
A8J5J7              	14.47%		
Bootstrap support for A8J139 as seed ortholog is 100%.
Bootstrap support for H3GL40 as seed ortholog is 100%.

Group of orthologs #1837. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.ramorum:98

A8I2Y4              	100.00%		H3G5M1              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for H3G5M1 as seed ortholog is 100%.

Group of orthologs #1838. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.ramorum:98

A8I3K3              	100.00%		H3GT92              	100.00%
Bootstrap support for A8I3K3 as seed ortholog is 100%.
Bootstrap support for H3GT92 as seed ortholog is 100%.

Group of orthologs #1839. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.ramorum:7

A8IW91              	100.00%		H3GHX8              	100.00%
Bootstrap support for A8IW91 as seed ortholog is 100%.
Bootstrap support for H3GHX8 as seed ortholog is 89%.

Group of orthologs #1840. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.ramorum:98

A8ITP7              	100.00%		H3GMH5              	100.00%
Bootstrap support for A8ITP7 as seed ortholog is 100%.
Bootstrap support for H3GMH5 as seed ortholog is 100%.

Group of orthologs #1841. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:98

A8JDH3              	100.00%		H3HD16              	100.00%
Bootstrap support for A8JDH3 as seed ortholog is 96%.
Bootstrap support for H3HD16 as seed ortholog is 100%.

Group of orthologs #1842. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.ramorum:98

Q94EY1              	100.00%		H3HBI3              	100.00%
Bootstrap support for Q94EY1 as seed ortholog is 100%.
Bootstrap support for H3HBI3 as seed ortholog is 100%.

Group of orthologs #1843. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:97

A8J625              	100.00%		H3HCE6              	100.00%
A8J5L3              	34.40%		
Bootstrap support for A8J625 as seed ortholog is 100%.
Bootstrap support for H3HCE6 as seed ortholog is 100%.

Group of orthologs #1844. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:97

A8HQ54              	100.00%		H3HE29              	100.00%
Bootstrap support for A8HQ54 as seed ortholog is 100%.
Bootstrap support for H3HE29 as seed ortholog is 100%.

Group of orthologs #1845. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:97

A8IZX7              	100.00%		H3H079              	100.00%
Bootstrap support for A8IZX7 as seed ortholog is 100%.
Bootstrap support for H3H079 as seed ortholog is 100%.

Group of orthologs #1846. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.ramorum:97

A8I4U2              	100.00%		H3HE78              	100.00%
Bootstrap support for A8I4U2 as seed ortholog is 93%.
Bootstrap support for H3HE78 as seed ortholog is 100%.

Group of orthologs #1847. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:46

Q7Y0H2              	100.00%		H3GH11              	100.00%
Bootstrap support for Q7Y0H2 as seed ortholog is 100%.
Bootstrap support for H3GH11 as seed ortholog is 98%.

Group of orthologs #1848. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.ramorum:97

Q84X76              	100.00%		H3GUD1              	100.00%
Bootstrap support for Q84X76 as seed ortholog is 100%.
Bootstrap support for H3GUD1 as seed ortholog is 100%.

Group of orthologs #1849. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:47

A8JII1              	100.00%		H3H6J4              	100.00%
Bootstrap support for A8JII1 as seed ortholog is 97%.
Bootstrap support for H3H6J4 as seed ortholog is 93%.

Group of orthologs #1850. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:21

A8J4Z8              	100.00%		H3GIV5              	100.00%
                    	       		H3GIV6              	97.03%
                    	       		H3GIU2              	68.65%
                    	       		H3GIU4              	53.09%
                    	       		H3GIU5              	52.86%
                    	       		H3GIU0              	39.82%
                    	       		H3GIU3              	36.38%
                    	       		H3GUL6              	18.08%
Bootstrap support for A8J4Z8 as seed ortholog is 100%.
Bootstrap support for H3GIV5 as seed ortholog is 72%.
Alternative seed ortholog is H3GZN2 (21 bits away from this cluster)

Group of orthologs #1851. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:9

A8IN79              	100.00%		H3GMU4              	100.00%
                    	       		H3GMU3              	42.51%
Bootstrap support for A8IN79 as seed ortholog is 100%.
Bootstrap support for H3GMU4 as seed ortholog is 38%.
Alternative seed ortholog is H3G718 (9 bits away from this cluster)

Group of orthologs #1852. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:96

A8IXG3              	100.00%		H3G538              	100.00%
Bootstrap support for A8IXG3 as seed ortholog is 100%.
Bootstrap support for H3G538 as seed ortholog is 100%.

Group of orthologs #1853. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:96

A8J8A6              	100.00%		H3G7J4              	100.00%
Bootstrap support for A8J8A6 as seed ortholog is 100%.
Bootstrap support for H3G7J4 as seed ortholog is 100%.

Group of orthologs #1854. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:96

A8IZD7              	100.00%		H3GMD4              	100.00%
Bootstrap support for A8IZD7 as seed ortholog is 100%.
Bootstrap support for H3GMD4 as seed ortholog is 100%.

Group of orthologs #1855. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:96

A8JFA1              	100.00%		H3GDE5              	100.00%
Bootstrap support for A8JFA1 as seed ortholog is 100%.
Bootstrap support for H3GDE5 as seed ortholog is 100%.

Group of orthologs #1856. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:40

A8J032              	100.00%		H3GUR5              	100.00%
Bootstrap support for A8J032 as seed ortholog is 100%.
Bootstrap support for H3GUR5 as seed ortholog is 88%.

Group of orthologs #1857. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.ramorum:96

A8JE76              	100.00%		H3HBQ8              	100.00%
Bootstrap support for A8JE76 as seed ortholog is 100%.
Bootstrap support for H3HBQ8 as seed ortholog is 100%.

Group of orthologs #1858. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:95

A8IU47              	100.00%		H3GIW5              	100.00%
Bootstrap support for A8IU47 as seed ortholog is 82%.
Bootstrap support for H3GIW5 as seed ortholog is 100%.

Group of orthologs #1859. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.ramorum:95

A8J1I2              	100.00%		H3GZT7              	100.00%
Bootstrap support for A8J1I2 as seed ortholog is 100%.
Bootstrap support for H3GZT7 as seed ortholog is 100%.

Group of orthologs #1860. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:49

A8I8I9              	100.00%		H3GEI5              	100.00%
                    	       		H3GQU4              	8.79%
                    	       		H3GQU8              	8.57%
                    	       		H3GQU7              	6.59%
Bootstrap support for A8I8I9 as seed ortholog is 100%.
Bootstrap support for H3GEI5 as seed ortholog is 88%.

Group of orthologs #1861. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8J0Y5              	100.00%		H3G8I8              	100.00%
                    	       		H3H5F1              	13.30%
Bootstrap support for A8J0Y5 as seed ortholog is 100%.
Bootstrap support for H3G8I8 as seed ortholog is 100%.

Group of orthologs #1862. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8I5K4              	100.00%		H3GY36              	100.00%
                    	       		H3GY56              	14.22%
Bootstrap support for A8I5K4 as seed ortholog is 100%.
Bootstrap support for H3GY36 as seed ortholog is 100%.

Group of orthologs #1863. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.ramorum:94

A8J3A8              	100.00%		H3GID5              	100.00%
A8J3A7              	48.00%		
Bootstrap support for A8J3A8 as seed ortholog is 85%.
Bootstrap support for H3GID5 as seed ortholog is 100%.

Group of orthologs #1864. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8HPP5              	100.00%		H3GG85              	100.00%
Bootstrap support for A8HPP5 as seed ortholog is 100%.
Bootstrap support for H3GG85 as seed ortholog is 100%.

Group of orthologs #1865. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8I422              	100.00%		H3GMU1              	100.00%
Bootstrap support for A8I422 as seed ortholog is 100%.
Bootstrap support for H3GMU1 as seed ortholog is 100%.

Group of orthologs #1866. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.ramorum:94

A8ING7              	100.00%		H3GHD8              	100.00%
Bootstrap support for A8ING7 as seed ortholog is 83%.
Bootstrap support for H3GHD8 as seed ortholog is 100%.

Group of orthologs #1867. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8IUT6              	100.00%		H3GF06              	100.00%
Bootstrap support for A8IUT6 as seed ortholog is 100%.
Bootstrap support for H3GF06 as seed ortholog is 100%.

Group of orthologs #1868. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8HV34              	100.00%		H3H3Y4              	100.00%
Bootstrap support for A8HV34 as seed ortholog is 100%.
Bootstrap support for H3H3Y4 as seed ortholog is 100%.

Group of orthologs #1869. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.ramorum:94

A8J2C4              	100.00%		H3GVL9              	100.00%
Bootstrap support for A8J2C4 as seed ortholog is 100%.
Bootstrap support for H3GVL9 as seed ortholog is 100%.

Group of orthologs #1870. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.ramorum:4

A8HTE8              	100.00%		H3GCF5              	100.00%
Bootstrap support for A8HTE8 as seed ortholog is 100%.
Bootstrap support for H3GCF5 as seed ortholog is 41%.
Alternative seed ortholog is H3HAR8 (4 bits away from this cluster)

Group of orthologs #1871. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.ramorum:93

A8J798              	100.00%		H3GGR6              	100.00%
Bootstrap support for A8J798 as seed ortholog is 100%.
Bootstrap support for H3GGR6 as seed ortholog is 100%.

Group of orthologs #1872. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.ramorum:93

A8JEF4              	100.00%		H3GQH7              	100.00%
Bootstrap support for A8JEF4 as seed ortholog is 100%.
Bootstrap support for H3GQH7 as seed ortholog is 100%.

Group of orthologs #1873. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.ramorum:93

A8JJH8              	100.00%		H3H0U9              	100.00%
Bootstrap support for A8JJH8 as seed ortholog is 100%.
Bootstrap support for H3H0U9 as seed ortholog is 100%.

Group of orthologs #1874. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:11

A8IYH0              	100.00%		H3GSP3              	100.00%
                    	       		H3GSP1              	7.18%
                    	       		H3H035              	6.91%
Bootstrap support for A8IYH0 as seed ortholog is 100%.
Bootstrap support for H3GSP3 as seed ortholog is 71%.
Alternative seed ortholog is H3GDK2 (11 bits away from this cluster)

Group of orthologs #1875. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.ramorum:92

A8J7X1              	100.00%		H3G9H2              	100.00%
A8IM09              	16.25%		
Bootstrap support for A8J7X1 as seed ortholog is 55%.
Alternative seed ortholog is A8J8D4 (5 bits away from this cluster)
Bootstrap support for H3G9H2 as seed ortholog is 100%.

Group of orthologs #1876. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:92

A8J1Q3              	100.00%		H3G5I2              	100.00%
Bootstrap support for A8J1Q3 as seed ortholog is 100%.
Bootstrap support for H3G5I2 as seed ortholog is 100%.

Group of orthologs #1877. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:92

A8I8P0              	100.00%		H3GR80              	100.00%
Bootstrap support for A8I8P0 as seed ortholog is 100%.
Bootstrap support for H3GR80 as seed ortholog is 100%.

Group of orthologs #1878. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:92

A8I826              	100.00%		H3GTF9              	100.00%
Bootstrap support for A8I826 as seed ortholog is 100%.
Bootstrap support for H3GTF9 as seed ortholog is 100%.

Group of orthologs #1879. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:92

A8HQD3              	100.00%		H3H255              	100.00%
Bootstrap support for A8HQD3 as seed ortholog is 100%.
Bootstrap support for H3H255 as seed ortholog is 100%.

Group of orthologs #1880. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:92

A8J479              	100.00%		H3H2W6              	100.00%
Bootstrap support for A8J479 as seed ortholog is 100%.
Bootstrap support for H3H2W6 as seed ortholog is 100%.

Group of orthologs #1881. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:92

A8JHW7              	100.00%		H3GXI5              	100.00%
Bootstrap support for A8JHW7 as seed ortholog is 100%.
Bootstrap support for H3GXI5 as seed ortholog is 100%.

Group of orthologs #1882. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.ramorum:22

A8J7H1              	100.00%		H3HDN5              	100.00%
Bootstrap support for A8J7H1 as seed ortholog is 100%.
Bootstrap support for H3HDN5 as seed ortholog is 82%.

Group of orthologs #1883. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

Q5VLJ9              	100.00%		H3H298              	100.00%
A8IR22              	7.96%		H3H297              	66.17%
                    	       		H3H296              	63.91%
                    	       		H3GAN5              	49.25%
                    	       		H3GAN8              	43.05%
                    	       		H3GAN7              	42.48%
                    	       		H3GAN6              	41.92%
                    	       		H3GAN4              	41.35%
                    	       		H3G8F8              	35.90%
                    	       		H3G9Q5              	35.53%
                    	       		H3H9X5              	33.08%
                    	       		H3GSY9              	32.52%
                    	       		H3GB18              	31.95%
                    	       		H3G9Q4              	31.95%
                    	       		H3GAJ4              	31.95%
                    	       		H3GAJ3              	31.58%
                    	       		H3GB24              	31.20%
                    	       		H3G742              	29.51%
                    	       		H3HCB8              	28.20%
                    	       		H3GSY3              	28.01%
                    	       		H3G9Q6              	27.82%
                    	       		H3G9Q3              	22.74%
                    	       		H3GSY4              	21.05%
                    	       		H3GSY8              	20.86%
                    	       		H3H741              	20.49%
                    	       		H3H8L5              	18.61%
Bootstrap support for Q5VLJ9 as seed ortholog is 100%.
Bootstrap support for H3H298 as seed ortholog is 100%.

Group of orthologs #1884. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8HRI6              	100.00%		H3GDL7              	100.00%
                    	       		H3GJE9              	63.60%
                    	       		H3GJL0              	50.54%
                    	       		H3GJL5              	49.46%
                    	       		H3GC13              	19.58%
Bootstrap support for A8HRI6 as seed ortholog is 100%.
Bootstrap support for H3GDL7 as seed ortholog is 100%.

Group of orthologs #1885. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8JJP0              	100.00%		H3G7Y8              	100.00%
A8I2Q4              	85.16%		
A8I2Q6              	82.00%		
A8JKB0              	45.99%		
A8JJN9              	39.66%		
Bootstrap support for A8JJP0 as seed ortholog is 100%.
Bootstrap support for H3G7Y8 as seed ortholog is 100%.

Group of orthologs #1886. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:7

A8IKF8              	100.00%		H3GJG4              	100.00%
                    	       		H3GJH3              	55.18%
                    	       		H3GES0              	27.98%
Bootstrap support for A8IKF8 as seed ortholog is 100%.
Bootstrap support for H3GJG4 as seed ortholog is 59%.
Alternative seed ortholog is H3H9Y0 (7 bits away from this cluster)

Group of orthologs #1887. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:19

A8JHA9              	100.00%		H3G8S4              	100.00%
A8IYH1              	38.61%		H3G9V5              	74.56%
Bootstrap support for A8JHA9 as seed ortholog is 100%.
Bootstrap support for H3G8S4 as seed ortholog is 83%.

Group of orthologs #1888. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8HMG1              	100.00%		H3GDW5              	100.00%
A8HMF6              	55.36%		
Bootstrap support for A8HMG1 as seed ortholog is 100%.
Bootstrap support for H3GDW5 as seed ortholog is 100%.

Group of orthologs #1889. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.ramorum:22

A8JIK1              	100.00%		H3GMP9              	100.00%
                    	       		H3HC90              	37.54%
Bootstrap support for A8JIK1 as seed ortholog is 73%.
Alternative seed ortholog is A8JBQ1 (35 bits away from this cluster)
Bootstrap support for H3GMP9 as seed ortholog is 73%.
Alternative seed ortholog is H3GGX6 (22 bits away from this cluster)

Group of orthologs #1890. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8IYG3              	100.00%		H3GA46              	100.00%
Bootstrap support for A8IYG3 as seed ortholog is 100%.
Bootstrap support for H3GA46 as seed ortholog is 100%.

Group of orthologs #1891. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8I282              	100.00%		H3H4Q6              	100.00%
Bootstrap support for A8I282 as seed ortholog is 100%.
Bootstrap support for H3H4Q6 as seed ortholog is 100%.

Group of orthologs #1892. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8JCN8              	100.00%		H3GEB1              	100.00%
Bootstrap support for A8JCN8 as seed ortholog is 100%.
Bootstrap support for H3GEB1 as seed ortholog is 100%.

Group of orthologs #1893. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8IZV7              	100.00%		H3GTM4              	100.00%
Bootstrap support for A8IZV7 as seed ortholog is 100%.
Bootstrap support for H3GTM4 as seed ortholog is 100%.

Group of orthologs #1894. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:47

A8J509              	100.00%		H3H003              	100.00%
Bootstrap support for A8J509 as seed ortholog is 100%.
Bootstrap support for H3H003 as seed ortholog is 90%.

Group of orthologs #1895. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.ramorum:91

A8JFR8              	100.00%		H3HBI0              	100.00%
Bootstrap support for A8JFR8 as seed ortholog is 100%.
Bootstrap support for H3HBI0 as seed ortholog is 100%.

Group of orthologs #1896. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:90

A8IZ67              	100.00%		H3H1J2              	100.00%
A8J3I7              	7.38%		H3GUE5              	49.72%
                    	       		H3GII6              	47.24%
Bootstrap support for A8IZ67 as seed ortholog is 100%.
Bootstrap support for H3H1J2 as seed ortholog is 100%.

Group of orthologs #1897. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:90

A8I0C2              	100.00%		H3GH35              	100.00%
                    	       		H3H5H0              	100.00%
Bootstrap support for A8I0C2 as seed ortholog is 100%.
Bootstrap support for H3GH35 as seed ortholog is 100%.
Bootstrap support for H3H5H0 as seed ortholog is 100%.

Group of orthologs #1898. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:90

A8J2W4              	100.00%		H3GM83              	100.00%
                    	       		H3GM81              	34.13%
Bootstrap support for A8J2W4 as seed ortholog is 88%.
Bootstrap support for H3GM83 as seed ortholog is 100%.

Group of orthologs #1899. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:90

A8I5Y2              	100.00%		H3GH20              	100.00%
Bootstrap support for A8I5Y2 as seed ortholog is 100%.
Bootstrap support for H3GH20 as seed ortholog is 100%.

Group of orthologs #1900. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:90

A8IVB1              	100.00%		H3GH42              	100.00%
Bootstrap support for A8IVB1 as seed ortholog is 100%.
Bootstrap support for H3GH42 as seed ortholog is 100%.

Group of orthologs #1901. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:90

A8J1D5              	100.00%		H3GTJ4              	100.00%
Bootstrap support for A8J1D5 as seed ortholog is 100%.
Bootstrap support for H3GTJ4 as seed ortholog is 100%.

Group of orthologs #1902. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:22

A8JGI1              	100.00%		H3GLG2              	100.00%
Bootstrap support for A8JGI1 as seed ortholog is 100%.
Bootstrap support for H3GLG2 as seed ortholog is 77%.

Group of orthologs #1903. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.ramorum:90

Q6UBQ3              	100.00%		H3GSD3              	100.00%
Bootstrap support for Q6UBQ3 as seed ortholog is 100%.
Bootstrap support for H3GSD3 as seed ortholog is 100%.

Group of orthologs #1904. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 P.ramorum:2

A8HM62              	100.00%		H3GTD3              	100.00%
A8J0A2              	10.69%		
Bootstrap support for A8HM62 as seed ortholog is 69%.
Alternative seed ortholog is A8JDL8 (13 bits away from this cluster)
Bootstrap support for H3GTD3 as seed ortholog is 49%.
Alternative seed ortholog is H3H6J3 (2 bits away from this cluster)

Group of orthologs #1905. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8IKB4              	100.00%		H3GPZ0              	100.00%
                    	       		H3GTS6              	62.65%
Bootstrap support for A8IKB4 as seed ortholog is 100%.
Bootstrap support for H3GPZ0 as seed ortholog is 100%.

Group of orthologs #1906. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8HRS8              	100.00%		H3G549              	100.00%
Bootstrap support for A8HRS8 as seed ortholog is 100%.
Bootstrap support for H3G549 as seed ortholog is 100%.

Group of orthologs #1907. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8HP50              	100.00%		H3GMV3              	100.00%
Bootstrap support for A8HP50 as seed ortholog is 100%.
Bootstrap support for H3GMV3 as seed ortholog is 100%.

Group of orthologs #1908. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8HYL5              	100.00%		H3GMW3              	100.00%
Bootstrap support for A8HYL5 as seed ortholog is 100%.
Bootstrap support for H3GMW3 as seed ortholog is 100%.

Group of orthologs #1909. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8IIY3              	100.00%		H3GM03              	100.00%
Bootstrap support for A8IIY3 as seed ortholog is 100%.
Bootstrap support for H3GM03 as seed ortholog is 100%.

Group of orthologs #1910. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8J0Q1              	100.00%		H3GKK3              	100.00%
Bootstrap support for A8J0Q1 as seed ortholog is 100%.
Bootstrap support for H3GKK3 as seed ortholog is 100%.

Group of orthologs #1911. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8JBL3              	100.00%		H3GHM1              	100.00%
Bootstrap support for A8JBL3 as seed ortholog is 100%.
Bootstrap support for H3GHM1 as seed ortholog is 100%.

Group of orthologs #1912. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8J2B6              	100.00%		H3GRU1              	100.00%
Bootstrap support for A8J2B6 as seed ortholog is 100%.
Bootstrap support for H3GRU1 as seed ortholog is 100%.

Group of orthologs #1913. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

A8IF19              	100.00%		H3HBI6              	100.00%
Bootstrap support for A8IF19 as seed ortholog is 100%.
Bootstrap support for H3HBI6 as seed ortholog is 100%.

Group of orthologs #1914. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.ramorum:89

Q8LLV9              	100.00%		H3GSG3              	100.00%
Bootstrap support for Q8LLV9 as seed ortholog is 100%.
Bootstrap support for H3GSG3 as seed ortholog is 100%.

Group of orthologs #1915. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.ramorum:88

A8HQ39              	100.00%		H3H0W5              	100.00%
                    	       		H3GUU3              	26.03%
Bootstrap support for A8HQ39 as seed ortholog is 100%.
Bootstrap support for H3H0W5 as seed ortholog is 100%.

Group of orthologs #1916. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.ramorum:88

A8J4G2              	100.00%		H3GV43              	100.00%
Bootstrap support for A8J4G2 as seed ortholog is 100%.
Bootstrap support for H3GV43 as seed ortholog is 100%.

Group of orthologs #1917. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:87

A8J8J2              	100.00%		H3GHW9              	100.00%
                    	       		H3G8S9              	49.55%
Bootstrap support for A8J8J2 as seed ortholog is 100%.
Bootstrap support for H3GHW9 as seed ortholog is 100%.

Group of orthologs #1918. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.ramorum:87

A8IG67              	100.00%		H3GBU4              	100.00%
Bootstrap support for A8IG67 as seed ortholog is 45%.
Alternative seed ortholog is A8J8P9 (1 bits away from this cluster)
Bootstrap support for H3GBU4 as seed ortholog is 100%.

Group of orthologs #1919. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:87

A8JF64              	100.00%		H3GCL4              	100.00%
Bootstrap support for A8JF64 as seed ortholog is 100%.
Bootstrap support for H3GCL4 as seed ortholog is 100%.

Group of orthologs #1920. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.ramorum:87

A8JGZ8              	100.00%		H3GX85              	100.00%
Bootstrap support for A8JGZ8 as seed ortholog is 100%.
Bootstrap support for H3GX85 as seed ortholog is 100%.

Group of orthologs #1921. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 P.ramorum:1

A8HUN2              	100.00%		H3GMU6              	100.00%
A8JDG6              	5.00%		
Bootstrap support for A8HUN2 as seed ortholog is 71%.
Alternative seed ortholog is A8JAT7 (2 bits away from this cluster)
Bootstrap support for H3GMU6 as seed ortholog is 50%.
Alternative seed ortholog is H3GY55 (1 bits away from this cluster)

Group of orthologs #1922. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8I5E8              	100.00%		H3G8W9              	100.00%
Bootstrap support for A8I5E8 as seed ortholog is 100%.
Bootstrap support for H3G8W9 as seed ortholog is 100%.

Group of orthologs #1923. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8IKP1              	100.00%		H3G5A1              	100.00%
Bootstrap support for A8IKP1 as seed ortholog is 100%.
Bootstrap support for H3G5A1 as seed ortholog is 100%.

Group of orthologs #1924. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8I7F7              	100.00%		H3GI69              	100.00%
Bootstrap support for A8I7F7 as seed ortholog is 100%.
Bootstrap support for H3GI69 as seed ortholog is 100%.

Group of orthologs #1925. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8J5R2              	100.00%		H3G733              	100.00%
Bootstrap support for A8J5R2 as seed ortholog is 100%.
Bootstrap support for H3G733 as seed ortholog is 100%.

Group of orthologs #1926. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.ramorum:86

A8IQE6              	100.00%		H3GNP2              	100.00%
Bootstrap support for A8IQE6 as seed ortholog is 62%.
Alternative seed ortholog is A8HN08 (34 bits away from this cluster)
Bootstrap support for H3GNP2 as seed ortholog is 100%.

Group of orthologs #1927. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8IJG5              	100.00%		H3GRS3              	100.00%
Bootstrap support for A8IJG5 as seed ortholog is 100%.
Bootstrap support for H3GRS3 as seed ortholog is 100%.

Group of orthologs #1928. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8JBD0              	100.00%		H3H2G6              	100.00%
Bootstrap support for A8JBD0 as seed ortholog is 100%.
Bootstrap support for H3H2G6 as seed ortholog is 100%.

Group of orthologs #1929. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.ramorum:86

A8JHQ5              	100.00%		H3HDW2              	100.00%
Bootstrap support for A8JHQ5 as seed ortholog is 100%.
Bootstrap support for H3HDW2 as seed ortholog is 100%.

Group of orthologs #1930. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8IXI5              	100.00%		H3GDK5              	100.00%
                    	       		H3HAU8              	6.44%
Bootstrap support for A8IXI5 as seed ortholog is 100%.
Bootstrap support for H3GDK5 as seed ortholog is 100%.

Group of orthologs #1931. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8IVF4              	100.00%		H3HAU2              	100.00%
                    	       		H3HCH5              	21.50%
Bootstrap support for A8IVF4 as seed ortholog is 100%.
Bootstrap support for H3HAU2 as seed ortholog is 100%.

Group of orthologs #1932. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8HT66              	100.00%		H3GEF9              	100.00%
Bootstrap support for A8HT66 as seed ortholog is 100%.
Bootstrap support for H3GEF9 as seed ortholog is 100%.

Group of orthologs #1933. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8HND3              	100.00%		H3GMF9              	100.00%
Bootstrap support for A8HND3 as seed ortholog is 100%.
Bootstrap support for H3GMF9 as seed ortholog is 100%.

Group of orthologs #1934. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8I406              	100.00%		H3GIM4              	100.00%
Bootstrap support for A8I406 as seed ortholog is 100%.
Bootstrap support for H3GIM4 as seed ortholog is 100%.

Group of orthologs #1935. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8IT26              	100.00%		H3GFJ9              	100.00%
Bootstrap support for A8IT26 as seed ortholog is 100%.
Bootstrap support for H3GFJ9 as seed ortholog is 100%.

Group of orthologs #1936. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.ramorum:85

A8J3U9              	100.00%		H3GA96              	100.00%
Bootstrap support for A8J3U9 as seed ortholog is 89%.
Bootstrap support for H3GA96 as seed ortholog is 100%.

Group of orthologs #1937. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.ramorum:85

A8ICI6              	100.00%		H3GSZ6              	100.00%
Bootstrap support for A8ICI6 as seed ortholog is 100%.
Bootstrap support for H3GSZ6 as seed ortholog is 100%.

Group of orthologs #1938. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8J5J3              	100.00%		H3H6P1              	100.00%
                    	       		H3H416              	58.51%
                    	       		H3GKW2              	57.62%
                    	       		H3H415              	55.62%
                    	       		H3H5B3              	55.00%
                    	       		H3H5W5              	40.66%
Bootstrap support for A8J5J3 as seed ortholog is 100%.
Bootstrap support for H3H6P1 as seed ortholog is 100%.

Group of orthologs #1939. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8J3U6              	100.00%		H3G8Q8              	100.00%
A8J3U5              	82.15%		H3GHH0              	56.02%
A8J3T2              	12.13%		H3G5Z7              	49.77%
Bootstrap support for A8J3U6 as seed ortholog is 100%.
Bootstrap support for H3G8Q8 as seed ortholog is 100%.

Group of orthologs #1940. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:1

A8JCH3              	100.00%		H3GZ85              	100.00%
A8JDR4              	49.38%		H3GZ87              	89.43%
A8J8K1              	13.99%		H3H1F7              	18.56%
Bootstrap support for A8JCH3 as seed ortholog is 100%.
Bootstrap support for H3GZ85 as seed ortholog is 50%.
Alternative seed ortholog is H3G6D3 (1 bits away from this cluster)

Group of orthologs #1941. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8JFN6              	100.00%		H3HCC3              	100.00%
                    	       		H3GNG8              	52.17%
                    	       		H3GS51              	26.38%
                    	       		H3GS52              	26.14%
                    	       		H3HDP6              	11.49%
Bootstrap support for A8JFN6 as seed ortholog is 100%.
Bootstrap support for H3HCC3 as seed ortholog is 100%.

Group of orthologs #1942. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8I9K7              	100.00%		H3GVM8              	100.00%
A8J055              	22.56%		H3H2M2              	86.26%
Bootstrap support for A8I9K7 as seed ortholog is 100%.
Bootstrap support for H3GVM8 as seed ortholog is 100%.

Group of orthologs #1943. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8J8J3              	100.00%		H3GRW0              	100.00%
                    	       		H3H6B9              	100.00%
Bootstrap support for A8J8J3 as seed ortholog is 100%.
Bootstrap support for H3GRW0 as seed ortholog is 100%.
Bootstrap support for H3H6B9 as seed ortholog is 100%.

Group of orthologs #1944. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8ITI5              	100.00%		H3GF16              	100.00%
Bootstrap support for A8ITI5 as seed ortholog is 100%.
Bootstrap support for H3GF16 as seed ortholog is 100%.

Group of orthologs #1945. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8IX94              	100.00%		H3GHR0              	100.00%
Bootstrap support for A8IX94 as seed ortholog is 100%.
Bootstrap support for H3GHR0 as seed ortholog is 100%.

Group of orthologs #1946. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8J9C0              	100.00%		H3G7Y0              	100.00%
Bootstrap support for A8J9C0 as seed ortholog is 100%.
Bootstrap support for H3G7Y0 as seed ortholog is 100%.

Group of orthologs #1947. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8J116              	100.00%		H3GFN7              	100.00%
Bootstrap support for A8J116 as seed ortholog is 100%.
Bootstrap support for H3GFN7 as seed ortholog is 100%.

Group of orthologs #1948. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8J7J8              	100.00%		H3GIY3              	100.00%
Bootstrap support for A8J7J8 as seed ortholog is 100%.
Bootstrap support for H3GIY3 as seed ortholog is 100%.

Group of orthologs #1949. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8JC23              	100.00%		H3GG75              	100.00%
Bootstrap support for A8JC23 as seed ortholog is 100%.
Bootstrap support for H3GG75 as seed ortholog is 100%.

Group of orthologs #1950. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8ICM2              	100.00%		H3H3B6              	100.00%
Bootstrap support for A8ICM2 as seed ortholog is 100%.
Bootstrap support for H3H3B6 as seed ortholog is 100%.

Group of orthologs #1951. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8JEE2              	100.00%		H3GFP9              	100.00%
Bootstrap support for A8JEE2 as seed ortholog is 100%.
Bootstrap support for H3GFP9 as seed ortholog is 100%.

Group of orthologs #1952. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.ramorum:84

A8J5M7              	100.00%		H3GUM8              	100.00%
Bootstrap support for A8J5M7 as seed ortholog is 38%.
Alternative seed ortholog is A8J8P9 (3 bits away from this cluster)
Bootstrap support for H3GUM8 as seed ortholog is 100%.

Group of orthologs #1953. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8IYR7              	100.00%		H3H7V5              	100.00%
Bootstrap support for A8IYR7 as seed ortholog is 100%.
Bootstrap support for H3H7V5 as seed ortholog is 100%.

Group of orthologs #1954. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.ramorum:84

A8JAG2              	100.00%		H3HC29              	100.00%
Bootstrap support for A8JAG2 as seed ortholog is 100%.
Bootstrap support for H3HC29 as seed ortholog is 100%.

Group of orthologs #1955. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.ramorum:27

A8IZX5              	100.00%		H3G511              	100.00%
Bootstrap support for A8IZX5 as seed ortholog is 59%.
Alternative seed ortholog is A8JIF9 (3 bits away from this cluster)
Bootstrap support for H3G511 as seed ortholog is 85%.

Group of orthologs #1956. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.ramorum:83

A8JGS2              	100.00%		H3G536              	100.00%
Bootstrap support for A8JGS2 as seed ortholog is 100%.
Bootstrap support for H3G536 as seed ortholog is 100%.

Group of orthologs #1957. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.ramorum:83

A8I3H2              	100.00%		H3HBC8              	100.00%
Bootstrap support for A8I3H2 as seed ortholog is 100%.
Bootstrap support for H3HBC8 as seed ortholog is 100%.

Group of orthologs #1958. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.ramorum:83

Q84U22              	100.00%		H3GHB9              	100.00%
Bootstrap support for Q84U22 as seed ortholog is 100%.
Bootstrap support for H3GHB9 as seed ortholog is 100%.

Group of orthologs #1959. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:82

A8JAP8              	100.00%		H3H3M0              	100.00%
A8IYF2              	7.34%		
Bootstrap support for A8JAP8 as seed ortholog is 100%.
Bootstrap support for H3H3M0 as seed ortholog is 100%.

Group of orthologs #1960. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:82

A8IIP4              	100.00%		H3GLB8              	100.00%
Bootstrap support for A8IIP4 as seed ortholog is 100%.
Bootstrap support for H3GLB8 as seed ortholog is 100%.

Group of orthologs #1961. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:82

A8I388              	100.00%		H3GS08              	100.00%
Bootstrap support for A8I388 as seed ortholog is 100%.
Bootstrap support for H3GS08 as seed ortholog is 100%.

Group of orthologs #1962. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:82

A8HSP6              	100.00%		H3HAQ9              	100.00%
Bootstrap support for A8HSP6 as seed ortholog is 100%.
Bootstrap support for H3HAQ9 as seed ortholog is 100%.

Group of orthologs #1963. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:82

A8JD76              	100.00%		H3GFL5              	100.00%
Bootstrap support for A8JD76 as seed ortholog is 100%.
Bootstrap support for H3GFL5 as seed ortholog is 100%.

Group of orthologs #1964. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.ramorum:82

A8J8L3              	100.00%		H3GPH7              	100.00%
Bootstrap support for A8J8L3 as seed ortholog is 66%.
Alternative seed ortholog is A8J8L2 (7 bits away from this cluster)
Bootstrap support for H3GPH7 as seed ortholog is 100%.

Group of orthologs #1965. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.ramorum:82

A8J2G7              	100.00%		H3GVL0              	100.00%
Bootstrap support for A8J2G7 as seed ortholog is 100%.
Bootstrap support for H3GVL0 as seed ortholog is 100%.

Group of orthologs #1966. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8ISD1              	100.00%		H3GX89              	100.00%
                    	       		H3GF33              	23.27%
                    	       		H3GME2              	14.11%
Bootstrap support for A8ISD1 as seed ortholog is 100%.
Bootstrap support for H3GX89 as seed ortholog is 100%.

Group of orthologs #1967. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8I777              	100.00%		H3GRS9              	100.00%
                    	       		H3GNP1              	5.99%
Bootstrap support for A8I777 as seed ortholog is 100%.
Bootstrap support for H3GRS9 as seed ortholog is 100%.

Group of orthologs #1968. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8HSH5              	100.00%		H3H103              	100.00%
A8HMQ5              	15.00%		
Bootstrap support for A8HSH5 as seed ortholog is 100%.
Bootstrap support for H3H103 as seed ortholog is 100%.

Group of orthologs #1969. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:6

A8HPV7              	100.00%		H3H2B6              	100.00%
                    	       		H3GGN2              	93.35%
Bootstrap support for A8HPV7 as seed ortholog is 100%.
Bootstrap support for H3H2B6 as seed ortholog is 59%.
Alternative seed ortholog is H3H1S5 (6 bits away from this cluster)

Group of orthologs #1970. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.ramorum:81

A8I7N1              	100.00%		H3G5A8              	100.00%
Bootstrap support for A8I7N1 as seed ortholog is 73%.
Alternative seed ortholog is A8HUZ1 (11 bits away from this cluster)
Bootstrap support for H3G5A8 as seed ortholog is 100%.

Group of orthologs #1971. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8I462              	100.00%		H3GIS0              	100.00%
Bootstrap support for A8I462 as seed ortholog is 100%.
Bootstrap support for H3GIS0 as seed ortholog is 100%.

Group of orthologs #1972. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8IPT6              	100.00%		H3GCB0              	100.00%
Bootstrap support for A8IPT6 as seed ortholog is 100%.
Bootstrap support for H3GCB0 as seed ortholog is 100%.

Group of orthologs #1973. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8IZA8              	100.00%		H3G7W8              	100.00%
Bootstrap support for A8IZA8 as seed ortholog is 100%.
Bootstrap support for H3G7W8 as seed ortholog is 100%.

Group of orthologs #1974. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8I3N0              	100.00%		H3GNF1              	100.00%
Bootstrap support for A8I3N0 as seed ortholog is 100%.
Bootstrap support for H3GNF1 as seed ortholog is 100%.

Group of orthologs #1975. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8IJT8              	100.00%		H3GV00              	100.00%
Bootstrap support for A8IJT8 as seed ortholog is 100%.
Bootstrap support for H3GV00 as seed ortholog is 100%.

Group of orthologs #1976. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8J6E6              	100.00%		H3GH71              	100.00%
Bootstrap support for A8J6E6 as seed ortholog is 100%.
Bootstrap support for H3GH71 as seed ortholog is 100%.

Group of orthologs #1977. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8ISI4              	100.00%		H3GV62              	100.00%
Bootstrap support for A8ISI4 as seed ortholog is 100%.
Bootstrap support for H3GV62 as seed ortholog is 100%.

Group of orthologs #1978. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8IUC6              	100.00%		H3HBW8              	100.00%
Bootstrap support for A8IUC6 as seed ortholog is 100%.
Bootstrap support for H3HBW8 as seed ortholog is 100%.

Group of orthologs #1979. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.ramorum:81

A8JGS4              	100.00%		H3HAQ1              	100.00%
Bootstrap support for A8JGS4 as seed ortholog is 100%.
Bootstrap support for H3HAQ1 as seed ortholog is 100%.

Group of orthologs #1980. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

A8IES6              	100.00%		H3GE41              	100.00%
Bootstrap support for A8IES6 as seed ortholog is 100%.
Bootstrap support for H3GE41 as seed ortholog is 100%.

Group of orthologs #1981. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

A8I2N9              	100.00%		H3GKS2              	100.00%
Bootstrap support for A8I2N9 as seed ortholog is 100%.
Bootstrap support for H3GKS2 as seed ortholog is 100%.

Group of orthologs #1982. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

A8HNP5              	100.00%		H3H027              	100.00%
Bootstrap support for A8HNP5 as seed ortholog is 100%.
Bootstrap support for H3H027 as seed ortholog is 100%.

Group of orthologs #1983. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

A8IRB6              	100.00%		H3H2V2              	100.00%
Bootstrap support for A8IRB6 as seed ortholog is 100%.
Bootstrap support for H3H2V2 as seed ortholog is 100%.

Group of orthologs #1984. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

A8HXW6              	100.00%		H3HEC3              	100.00%
Bootstrap support for A8HXW6 as seed ortholog is 100%.
Bootstrap support for H3HEC3 as seed ortholog is 100%.

Group of orthologs #1985. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

A8J2P4              	100.00%		H3HDX2              	100.00%
Bootstrap support for A8J2P4 as seed ortholog is 100%.
Bootstrap support for H3HDX2 as seed ortholog is 100%.

Group of orthologs #1986. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.ramorum:80

Q27YU6              	100.00%		H3HC20              	100.00%
Bootstrap support for Q27YU6 as seed ortholog is 100%.
Bootstrap support for H3HC20 as seed ortholog is 100%.

Group of orthologs #1987. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 P.ramorum:79

A8I2F3              	100.00%		H3GS96              	100.00%
A8I2D5              	27.09%		
A8I879              	11.96%		
Bootstrap support for A8I2F3 as seed ortholog is 68%.
Alternative seed ortholog is A8IVY1 (16 bits away from this cluster)
Bootstrap support for H3GS96 as seed ortholog is 100%.

Group of orthologs #1988. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:79

A8I8N0              	100.00%		H3GG53              	100.00%
A8IL71              	12.24%		
Bootstrap support for A8I8N0 as seed ortholog is 100%.
Bootstrap support for H3GG53 as seed ortholog is 100%.

Group of orthologs #1989. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:79

A8JCC6              	100.00%		H3GGS5              	100.00%
                    	       		H3GIY1              	18.52%
Bootstrap support for A8JCC6 as seed ortholog is 100%.
Bootstrap support for H3GGS5 as seed ortholog is 100%.

Group of orthologs #1990. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:79

A8I439              	100.00%		H3G7M4              	100.00%
Bootstrap support for A8I439 as seed ortholog is 100%.
Bootstrap support for H3G7M4 as seed ortholog is 100%.

Group of orthologs #1991. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:79

A8IE61              	100.00%		H3GCK2              	100.00%
Bootstrap support for A8IE61 as seed ortholog is 100%.
Bootstrap support for H3GCK2 as seed ortholog is 100%.

Group of orthologs #1992. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:79

A8J7G5              	100.00%		H3GG70              	100.00%
Bootstrap support for A8J7G5 as seed ortholog is 100%.
Bootstrap support for H3GG70 as seed ortholog is 100%.

Group of orthologs #1993. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.ramorum:79

Q27YU5              	100.00%		H3GKT4              	100.00%
Bootstrap support for Q27YU5 as seed ortholog is 100%.
Bootstrap support for H3GKT4 as seed ortholog is 100%.

Group of orthologs #1994. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:78

A8IVG3              	100.00%		H3GWL9              	100.00%
A8J1P6              	48.27%		H3GQ05              	10.12%
Bootstrap support for A8IVG3 as seed ortholog is 100%.
Bootstrap support for H3GWL9 as seed ortholog is 100%.

Group of orthologs #1995. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:78

A8J1N7              	100.00%		H3GH17              	100.00%
Bootstrap support for A8J1N7 as seed ortholog is 100%.
Bootstrap support for H3GH17 as seed ortholog is 100%.

Group of orthologs #1996. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:78

A8IYJ5              	100.00%		H3GXE3              	100.00%
Bootstrap support for A8IYJ5 as seed ortholog is 100%.
Bootstrap support for H3GXE3 as seed ortholog is 100%.

Group of orthologs #1997. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.ramorum:78

A8JA86              	100.00%		H3GWJ2              	100.00%
Bootstrap support for A8JA86 as seed ortholog is 100%.
Bootstrap support for H3GWJ2 as seed ortholog is 100%.

Group of orthologs #1998. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8J2Z2              	100.00%		H3GF04              	100.00%
A8IZG1              	10.66%		H3GF03              	61.40%
A8I084              	6.74%		H3GF26              	40.77%
A8JC36              	5.97%		H3GF11              	39.97%
A8HQS7              	5.72%		H3GF17              	18.86%
A8J9X4              	5.39%		H3GUP4              	11.40%
                    	       		H3H154              	7.95%
Bootstrap support for A8J2Z2 as seed ortholog is 100%.
Bootstrap support for H3GF04 as seed ortholog is 100%.

Group of orthologs #1999. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

Q8S4W5              	100.00%		H3G6U1              	100.00%
A8JFM0              	10.00%		H3G571              	64.45%
Bootstrap support for Q8S4W5 as seed ortholog is 100%.
Bootstrap support for H3G6U1 as seed ortholog is 100%.

Group of orthologs #2000. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8I8E6              	100.00%		H3GQC1              	100.00%
                    	       		H3GGE8              	31.48%
Bootstrap support for A8I8E6 as seed ortholog is 100%.
Bootstrap support for H3GQC1 as seed ortholog is 100%.

Group of orthologs #2001. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8ILC7              	100.00%		H3G9A2              	100.00%
Bootstrap support for A8ILC7 as seed ortholog is 100%.
Bootstrap support for H3G9A2 as seed ortholog is 100%.

Group of orthologs #2002. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:77

A8J0E3              	100.00%		H3G7T1              	100.00%
Bootstrap support for A8J0E3 as seed ortholog is 95%.
Bootstrap support for H3G7T1 as seed ortholog is 100%.

Group of orthologs #2003. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8J0Q9              	100.00%		H3G7V9              	100.00%
Bootstrap support for A8J0Q9 as seed ortholog is 100%.
Bootstrap support for H3G7V9 as seed ortholog is 100%.

Group of orthologs #2004. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8IA11              	100.00%		H3GSH4              	100.00%
Bootstrap support for A8IA11 as seed ortholog is 100%.
Bootstrap support for H3GSH4 as seed ortholog is 100%.

Group of orthologs #2005. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8HQ71              	100.00%		H3H4D0              	100.00%
Bootstrap support for A8HQ71 as seed ortholog is 100%.
Bootstrap support for H3H4D0 as seed ortholog is 100%.

Group of orthologs #2006. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8JIE5              	100.00%		H3G4Y3              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for H3G4Y3 as seed ortholog is 100%.

Group of orthologs #2007. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8HXW0              	100.00%		H3H5Y6              	100.00%
Bootstrap support for A8HXW0 as seed ortholog is 100%.
Bootstrap support for H3H5Y6 as seed ortholog is 100%.

Group of orthologs #2008. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.ramorum:77

A8J7E3              	100.00%		H3GKM9              	100.00%
Bootstrap support for A8J7E3 as seed ortholog is 100%.
Bootstrap support for H3GKM9 as seed ortholog is 100%.

Group of orthologs #2009. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.ramorum:77

A8IJ98              	100.00%		H3H5A6              	100.00%
Bootstrap support for A8IJ98 as seed ortholog is 82%.
Bootstrap support for H3H5A6 as seed ortholog is 100%.

Group of orthologs #2010. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:76

A8J486              	100.00%		H3G5A5              	100.00%
A8ITD0              	21.05%		H3G5A4              	64.91%
                    	       		H3G6T7              	26.32%
Bootstrap support for A8J486 as seed ortholog is 100%.
Bootstrap support for H3G5A5 as seed ortholog is 100%.

Group of orthologs #2011. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.ramorum:76

A8IUC0              	100.00%		H3GFC9              	100.00%
A8HQP6              	13.75%		
A8JHG3              	7.81%		
Bootstrap support for A8IUC0 as seed ortholog is 62%.
Alternative seed ortholog is A8IF03 (10 bits away from this cluster)
Bootstrap support for H3GFC9 as seed ortholog is 100%.

Group of orthologs #2012. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:76

A8J8G3              	100.00%		H3GPG1              	100.00%
A8IP82              	14.70%		H3HA65              	100.00%
Bootstrap support for A8J8G3 as seed ortholog is 100%.
Bootstrap support for H3GPG1 as seed ortholog is 100%.
Bootstrap support for H3HA65 as seed ortholog is 100%.

Group of orthologs #2013. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:76

A8J1M4              	100.00%		H3GIW8              	100.00%
Bootstrap support for A8J1M4 as seed ortholog is 100%.
Bootstrap support for H3GIW8 as seed ortholog is 100%.

Group of orthologs #2014. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:76

A8IP92              	100.00%		H3HAG4              	100.00%
Bootstrap support for A8IP92 as seed ortholog is 100%.
Bootstrap support for H3HAG4 as seed ortholog is 100%.

Group of orthologs #2015. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.ramorum:76

Q6UP32              	100.00%		H3GV84              	100.00%
Bootstrap support for Q6UP32 as seed ortholog is 100%.
Bootstrap support for H3GV84 as seed ortholog is 100%.

Group of orthologs #2016. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.ramorum:75

A8JFF4              	100.00%		H3G6V3              	100.00%
                    	       		H3GFY8              	20.37%
                    	       		H3GFY9              	17.75%
                    	       		H3GYK2              	15.14%
Bootstrap support for A8JFF4 as seed ortholog is 100%.
Bootstrap support for H3G6V3 as seed ortholog is 100%.

Group of orthologs #2017. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.ramorum:8

A8IKP6              	100.00%		H3GJ96              	100.00%
A8J946              	6.56%		
A8J5G4              	5.80%		
Bootstrap support for A8IKP6 as seed ortholog is 47%.
Alternative seed ortholog is A8JGG1 (1 bits away from this cluster)
Bootstrap support for H3GJ96 as seed ortholog is 59%.
Alternative seed ortholog is H3GJU4 (8 bits away from this cluster)

Group of orthologs #2018. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.ramorum:75

A8IE68              	100.00%		H3GR11              	100.00%
A8IFN7              	19.49%		
Bootstrap support for A8IE68 as seed ortholog is 100%.
Bootstrap support for H3GR11 as seed ortholog is 100%.

Group of orthologs #2019. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.ramorum:75

A8I8A8              	100.00%		H3GCK4              	100.00%
Bootstrap support for A8I8A8 as seed ortholog is 100%.
Bootstrap support for H3GCK4 as seed ortholog is 100%.

Group of orthologs #2020. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.ramorum:10

A8JAC2              	100.00%		H3GG86              	100.00%
Bootstrap support for A8JAC2 as seed ortholog is 100%.
Bootstrap support for H3GG86 as seed ortholog is 71%.
Alternative seed ortholog is H3GM53 (10 bits away from this cluster)

Group of orthologs #2021. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8IUW3              	100.00%		H3GQL9              	100.00%
                    	       		H3GQL8              	26.65%
                    	       		H3GF30              	24.24%
Bootstrap support for A8IUW3 as seed ortholog is 100%.
Bootstrap support for H3GQL9 as seed ortholog is 100%.

Group of orthologs #2022. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8JGY8              	100.00%		H3H2V9              	100.00%
                    	       		H3H1T7              	19.79%
                    	       		H3G7R1              	5.91%
Bootstrap support for A8JGY8 as seed ortholog is 100%.
Bootstrap support for H3H2V9 as seed ortholog is 100%.

Group of orthologs #2023. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8IEX6              	100.00%		H3GM60              	100.00%
                    	       		H3H010              	28.09%
Bootstrap support for A8IEX6 as seed ortholog is 100%.
Bootstrap support for H3GM60 as seed ortholog is 100%.

Group of orthologs #2024. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8I8E9              	100.00%		H3GE50              	100.00%
Bootstrap support for A8I8E9 as seed ortholog is 100%.
Bootstrap support for H3GE50 as seed ortholog is 100%.

Group of orthologs #2025. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8J1X7              	100.00%		H3G5G3              	100.00%
Bootstrap support for A8J1X7 as seed ortholog is 100%.
Bootstrap support for H3G5G3 as seed ortholog is 100%.

Group of orthologs #2026. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8J0C9              	100.00%		H3GIA3              	100.00%
Bootstrap support for A8J0C9 as seed ortholog is 100%.
Bootstrap support for H3GIA3 as seed ortholog is 100%.

Group of orthologs #2027. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8IQJ2              	100.00%		H3H1F8              	100.00%
Bootstrap support for A8IQJ2 as seed ortholog is 100%.
Bootstrap support for H3H1F8 as seed ortholog is 100%.

Group of orthologs #2028. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8J3E1              	100.00%		H3GYH4              	100.00%
Bootstrap support for A8J3E1 as seed ortholog is 100%.
Bootstrap support for H3GYH4 as seed ortholog is 100%.

Group of orthologs #2029. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:74

A8JH22              	100.00%		H3GQR7              	100.00%
Bootstrap support for A8JH22 as seed ortholog is 100%.
Bootstrap support for H3GQR7 as seed ortholog is 100%.

Group of orthologs #2030. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.ramorum:17

A8JI14              	100.00%		H3GS64              	100.00%
Bootstrap support for A8JI14 as seed ortholog is 100%.
Bootstrap support for H3GS64 as seed ortholog is 68%.
Alternative seed ortholog is H3GHF4 (17 bits away from this cluster)

Group of orthologs #2031. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.ramorum:15

A8IZX6              	100.00%		H3HEC7              	100.00%
Bootstrap support for A8IZX6 as seed ortholog is 86%.
Bootstrap support for H3HEC7 as seed ortholog is 71%.
Alternative seed ortholog is H3H273 (15 bits away from this cluster)

Group of orthologs #2032. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.ramorum:73

A8I5Q9              	100.00%		H3H341              	100.00%
                    	       		H3HEB8              	100.00%
                    	       		H3GXC3              	74.03%
                    	       		H3H342              	60.26%
                    	       		H3GU46              	14.29%
Bootstrap support for A8I5Q9 as seed ortholog is 83%.
Bootstrap support for H3H341 as seed ortholog is 100%.
Bootstrap support for H3HEB8 as seed ortholog is 100%.

Group of orthologs #2033. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 P.ramorum:73

A8JKC1              	100.00%		H3H1M6              	100.00%
                    	       		H3H746              	77.09%
                    	       		H3H1M5              	38.83%
                    	       		H3H5U6              	6.15%
Bootstrap support for A8JKC1 as seed ortholog is 59%.
Alternative seed ortholog is A8JEG1 (6 bits away from this cluster)
Bootstrap support for H3H1M6 as seed ortholog is 100%.

Group of orthologs #2034. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:73

A8HRQ4              	100.00%		H3G912              	100.00%
A8IKV5              	22.03%		
A8JHU6              	5.80%		
Bootstrap support for A8HRQ4 as seed ortholog is 100%.
Bootstrap support for H3G912 as seed ortholog is 100%.

Group of orthologs #2035. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:2

A8HN46              	100.00%		H3GM65              	100.00%
Bootstrap support for A8HN46 as seed ortholog is 100%.
Bootstrap support for H3GM65 as seed ortholog is 54%.
Alternative seed ortholog is H3GKQ4 (2 bits away from this cluster)

Group of orthologs #2036. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:73

A8HW20              	100.00%		H3GM96              	100.00%
Bootstrap support for A8HW20 as seed ortholog is 100%.
Bootstrap support for H3GM96 as seed ortholog is 100%.

Group of orthologs #2037. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.ramorum:73

A8JHF3              	100.00%		H3GFF4              	100.00%
Bootstrap support for A8JHF3 as seed ortholog is 87%.
Bootstrap support for H3GFF4 as seed ortholog is 100%.

Group of orthologs #2038. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:73

A8IDK8              	100.00%		H3HAU5              	100.00%
Bootstrap support for A8IDK8 as seed ortholog is 100%.
Bootstrap support for H3HAU5 as seed ortholog is 100%.

Group of orthologs #2039. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.ramorum:73

A8IYX5              	100.00%		H3HEE2              	100.00%
Bootstrap support for A8IYX5 as seed ortholog is 100%.
Bootstrap support for H3HEE2 as seed ortholog is 100%.

Group of orthologs #2040. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:72

A8HMU6              	100.00%		H3GM74              	100.00%
Bootstrap support for A8HMU6 as seed ortholog is 100%.
Bootstrap support for H3GM74 as seed ortholog is 100%.

Group of orthologs #2041. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:72

A8J673              	100.00%		H3GBD4              	100.00%
Bootstrap support for A8J673 as seed ortholog is 100%.
Bootstrap support for H3GBD4 as seed ortholog is 100%.

Group of orthologs #2042. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:72

A8JEI5              	100.00%		H3GHV3              	100.00%
Bootstrap support for A8JEI5 as seed ortholog is 100%.
Bootstrap support for H3GHV3 as seed ortholog is 100%.

Group of orthologs #2043. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:72

A8J538              	100.00%		H3GZL3              	100.00%
Bootstrap support for A8J538 as seed ortholog is 100%.
Bootstrap support for H3GZL3 as seed ortholog is 100%.

Group of orthologs #2044. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.ramorum:72

A8ISD8              	100.00%		H3HAY7              	100.00%
Bootstrap support for A8ISD8 as seed ortholog is 100%.
Bootstrap support for H3HAY7 as seed ortholog is 100%.

Group of orthologs #2045. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.ramorum:71

A8HMR2              	100.00%		H3GER3              	100.00%
                    	       		H3GER2              	21.11%
Bootstrap support for A8HMR2 as seed ortholog is 100%.
Bootstrap support for H3GER3 as seed ortholog is 100%.

Group of orthologs #2046. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.ramorum:71

A8I730              	100.00%		H3GBQ6              	100.00%
A8JHF0              	6.08%		
Bootstrap support for A8I730 as seed ortholog is 100%.
Bootstrap support for H3GBQ6 as seed ortholog is 100%.

Group of orthologs #2047. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.ramorum:1

A8JBH7              	100.00%		H3G8D9              	100.00%
Bootstrap support for A8JBH7 as seed ortholog is 100%.
Bootstrap support for H3G8D9 as seed ortholog is 54%.
Alternative seed ortholog is H3GXL7 (1 bits away from this cluster)

Group of orthologs #2048. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A8I1I7              	100.00%		H3GRK2              	100.00%
                    	       		H3H8K1              	36.56%
                    	       		H3GRH9              	36.56%
                    	       		H3H4B6              	36.20%
                    	       		H3GRJ0              	35.48%
                    	       		H3GUG9              	35.30%
                    	       		H3GRI9              	25.63%
                    	       		H3G6V7              	22.22%
                    	       		H3GQX9              	14.70%
                    	       		H3GWH4              	11.65%
                    	       		H3H0D1              	7.71%
                    	       		H3H6S1              	6.09%
Bootstrap support for A8I1I7 as seed ortholog is 100%.
Bootstrap support for H3GRK2 as seed ortholog is 100%.

Group of orthologs #2049. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A8JF68              	100.00%		H3GRW3              	100.00%
A8IQ34              	5.14%		
Bootstrap support for A8JF68 as seed ortholog is 100%.
Bootstrap support for H3GRW3 as seed ortholog is 100%.

Group of orthologs #2050. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A8JFI0              	100.00%		H3GT62              	100.00%
                    	       		H3GT63              	55.15%
Bootstrap support for A8JFI0 as seed ortholog is 100%.
Bootstrap support for H3GT62 as seed ortholog is 100%.

Group of orthologs #2051. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A4PET3              	100.00%		H3GK54              	100.00%
Bootstrap support for A4PET3 as seed ortholog is 100%.
Bootstrap support for H3GK54 as seed ortholog is 100%.

Group of orthologs #2052. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:19

A8J5C4              	100.00%		H3G5A0              	100.00%
Bootstrap support for A8J5C4 as seed ortholog is 100%.
Bootstrap support for H3G5A0 as seed ortholog is 83%.

Group of orthologs #2053. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A8J6A7              	100.00%		H3GGE0              	100.00%
Bootstrap support for A8J6A7 as seed ortholog is 100%.
Bootstrap support for H3GGE0 as seed ortholog is 100%.

Group of orthologs #2054. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:21

A8IL11              	100.00%		H3GWV0              	100.00%
Bootstrap support for A8IL11 as seed ortholog is 100%.
Bootstrap support for H3GWV0 as seed ortholog is 78%.

Group of orthologs #2055. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A8IT32              	100.00%		H3GWF8              	100.00%
Bootstrap support for A8IT32 as seed ortholog is 100%.
Bootstrap support for H3GWF8 as seed ortholog is 100%.

Group of orthologs #2056. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.ramorum:70

A8J329              	100.00%		H3HDB6              	100.00%
Bootstrap support for A8J329 as seed ortholog is 100%.
Bootstrap support for H3HDB6 as seed ortholog is 100%.

Group of orthologs #2057. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:69

A8HX11              	100.00%		H3GC61              	100.00%
                    	       		H3GTW4              	35.19%
Bootstrap support for A8HX11 as seed ortholog is 100%.
Bootstrap support for H3GC61 as seed ortholog is 100%.

Group of orthologs #2058. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:4

A8JCX6              	100.00%		H3H1W4              	100.00%
                    	       		H3H6V6              	100.00%
Bootstrap support for A8JCX6 as seed ortholog is 100%.
Bootstrap support for H3H1W4 as seed ortholog is 56%.
Alternative seed ortholog is H3H110 (4 bits away from this cluster)
Bootstrap support for H3H6V6 as seed ortholog is 53%.
Alternative seed ortholog is H3H110 (4 bits away from this cluster)

Group of orthologs #2059. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:69

A8JDN8              	100.00%		H3G6J0              	100.00%
Bootstrap support for A8JDN8 as seed ortholog is 100%.
Bootstrap support for H3G6J0 as seed ortholog is 100%.

Group of orthologs #2060. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:69

A8J0L6              	100.00%		H3GPA4              	100.00%
Bootstrap support for A8J0L6 as seed ortholog is 100%.
Bootstrap support for H3GPA4 as seed ortholog is 100%.

Group of orthologs #2061. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:69

A8JCM2              	100.00%		H3GNT0              	100.00%
Bootstrap support for A8JCM2 as seed ortholog is 100%.
Bootstrap support for H3GNT0 as seed ortholog is 100%.

Group of orthologs #2062. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:69

A8JBQ8              	100.00%		H3GSK6              	100.00%
Bootstrap support for A8JBQ8 as seed ortholog is 100%.
Bootstrap support for H3GSK6 as seed ortholog is 100%.

Group of orthologs #2063. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.ramorum:69

A8IVT5              	100.00%		H3HAX1              	100.00%
Bootstrap support for A8IVT5 as seed ortholog is 100%.
Bootstrap support for H3HAX1 as seed ortholog is 100%.

Group of orthologs #2064. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:68

A8HQH0              	100.00%		H3GRN7              	100.00%
                    	       		H3GBS9              	5.76%
Bootstrap support for A8HQH0 as seed ortholog is 100%.
Bootstrap support for H3GRN7 as seed ortholog is 100%.

Group of orthologs #2065. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:68

A8J273              	100.00%		H3GDW8              	100.00%
Bootstrap support for A8J273 as seed ortholog is 100%.
Bootstrap support for H3GDW8 as seed ortholog is 100%.

Group of orthologs #2066. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:68

A8I0B6              	100.00%		H3H2J2              	100.00%
Bootstrap support for A8I0B6 as seed ortholog is 100%.
Bootstrap support for H3H2J2 as seed ortholog is 100%.

Group of orthologs #2067. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:68

A8IKT9              	100.00%		H3GW70              	100.00%
Bootstrap support for A8IKT9 as seed ortholog is 100%.
Bootstrap support for H3GW70 as seed ortholog is 100%.

Group of orthologs #2068. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.ramorum:68

A8HZJ6              	100.00%		H3HE38              	100.00%
Bootstrap support for A8HZJ6 as seed ortholog is 100%.
Bootstrap support for H3HE38 as seed ortholog is 100%.

Group of orthologs #2069. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8IBT7              	100.00%		H3GIJ2              	100.00%
                    	       		H3H7X0              	71.06%
                    	       		H3GII7              	66.38%
Bootstrap support for A8IBT7 as seed ortholog is 100%.
Bootstrap support for H3GIJ2 as seed ortholog is 100%.

Group of orthologs #2070. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.ramorum:67

A8HSY0              	100.00%		H3GQU1              	100.00%
                    	       		H3H607              	100.00%
Bootstrap support for A8HSY0 as seed ortholog is 56%.
Alternative seed ortholog is A8JCW9 (7 bits away from this cluster)
Bootstrap support for H3GQU1 as seed ortholog is 100%.
Bootstrap support for H3H607 as seed ortholog is 100%.

Group of orthologs #2071. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8IIT6              	100.00%		H3GUD7              	100.00%
A8IIT0              	90.88%		
Bootstrap support for A8IIT6 as seed ortholog is 100%.
Bootstrap support for H3GUD7 as seed ortholog is 100%.

Group of orthologs #2072. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8JAK9              	100.00%		H3GCD6              	100.00%
A8J1Y4              	10.76%		
Bootstrap support for A8JAK9 as seed ortholog is 100%.
Bootstrap support for H3GCD6 as seed ortholog is 100%.

Group of orthologs #2073. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8J265              	100.00%		H3GUQ9              	100.00%
                    	       		H3H6J8              	100.00%
Bootstrap support for A8J265 as seed ortholog is 100%.
Bootstrap support for H3GUQ9 as seed ortholog is 100%.
Bootstrap support for H3H6J8 as seed ortholog is 100%.

Group of orthologs #2074. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8HPQ4              	100.00%		H3GGJ0              	100.00%
Bootstrap support for A8HPQ4 as seed ortholog is 100%.
Bootstrap support for H3GGJ0 as seed ortholog is 100%.

Group of orthologs #2075. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8I7G7              	100.00%		H3GLV7              	100.00%
Bootstrap support for A8I7G7 as seed ortholog is 100%.
Bootstrap support for H3GLV7 as seed ortholog is 100%.

Group of orthologs #2076. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8J2K2              	100.00%		H3GGW6              	100.00%
Bootstrap support for A8J2K2 as seed ortholog is 100%.
Bootstrap support for H3GGW6 as seed ortholog is 100%.

Group of orthologs #2077. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8J696              	100.00%		H3GG13              	100.00%
Bootstrap support for A8J696 as seed ortholog is 100%.
Bootstrap support for H3GG13 as seed ortholog is 100%.

Group of orthologs #2078. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8JF91              	100.00%		H3GHF6              	100.00%
Bootstrap support for A8JF91 as seed ortholog is 100%.
Bootstrap support for H3GHF6 as seed ortholog is 100%.

Group of orthologs #2079. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8IC32              	100.00%		H3HBM7              	100.00%
Bootstrap support for A8IC32 as seed ortholog is 100%.
Bootstrap support for H3HBM7 as seed ortholog is 100%.

Group of orthologs #2080. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8J725              	100.00%		H3H1F2              	100.00%
Bootstrap support for A8J725 as seed ortholog is 100%.
Bootstrap support for H3H1F2 as seed ortholog is 100%.

Group of orthologs #2081. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.ramorum:67

A8JGN0              	100.00%		H3HD07              	100.00%
Bootstrap support for A8JGN0 as seed ortholog is 100%.
Bootstrap support for H3HD07 as seed ortholog is 100%.

Group of orthologs #2082. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:66

A8HXB8              	100.00%		H3H517              	100.00%
A8IEJ6              	100.00%		
A8J6A9              	5.47%		
Bootstrap support for A8HXB8 as seed ortholog is 100%.
Bootstrap support for A8IEJ6 as seed ortholog is 100%.
Bootstrap support for H3H517 as seed ortholog is 100%.

Group of orthologs #2083. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:66

A8I408              	100.00%		H3GYJ7              	100.00%
Bootstrap support for A8I408 as seed ortholog is 100%.
Bootstrap support for H3GYJ7 as seed ortholog is 100%.

Group of orthologs #2084. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:66

A8JH11              	100.00%		H3G7D7              	100.00%
Bootstrap support for A8JH11 as seed ortholog is 100%.
Bootstrap support for H3G7D7 as seed ortholog is 100%.

Group of orthologs #2085. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:66

A8J143              	100.00%		H3GPH0              	100.00%
Bootstrap support for A8J143 as seed ortholog is 100%.
Bootstrap support for H3GPH0 as seed ortholog is 100%.

Group of orthologs #2086. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:66

A8JCE2              	100.00%		H3GL78              	100.00%
Bootstrap support for A8JCE2 as seed ortholog is 100%.
Bootstrap support for H3GL78 as seed ortholog is 100%.

Group of orthologs #2087. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.ramorum:66

A8JHU3              	100.00%		H3GWJ9              	100.00%
Bootstrap support for A8JHU3 as seed ortholog is 100%.
Bootstrap support for H3GWJ9 as seed ortholog is 100%.

Group of orthologs #2088. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:65

A8JFV5              	100.00%		H3H5E3              	100.00%
A8J2A4              	100.00%		H3H5E4              	100.00%
A8IAK6              	13.77%		H3GF51              	50.26%
                    	       		H3H5E2              	13.44%
Bootstrap support for A8JFV5 as seed ortholog is 100%.
Bootstrap support for A8J2A4 as seed ortholog is 100%.
Bootstrap support for H3H5E3 as seed ortholog is 100%.
Bootstrap support for H3H5E4 as seed ortholog is 100%.

Group of orthologs #2089. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:0 P.ramorum:3

A8I9W2              	100.00%		H3G7T7              	100.00%
A8ID20              	61.76%		
A8HQK1              	6.47%		
Bootstrap support for A8I9W2 as seed ortholog is 49%.
Alternative seed ortholog is A8IR60 (0 bits away from this cluster)
Bootstrap support for H3G7T7 as seed ortholog is 54%.
Alternative seed ortholog is H3H0P8 (3 bits away from this cluster)

Group of orthologs #2090. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:65

A8HPF4              	100.00%		H3GH12              	100.00%
A8I528              	59.14%		H3GH13              	67.84%
Bootstrap support for A8HPF4 as seed ortholog is 100%.
Bootstrap support for H3GH12 as seed ortholog is 100%.

Group of orthologs #2091. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:11

A8HVM9              	100.00%		H3G4X1              	100.00%
                    	       		H3G9E4              	85.58%
Bootstrap support for A8HVM9 as seed ortholog is 100%.
Bootstrap support for H3G4X1 as seed ortholog is 62%.
Alternative seed ortholog is H3H7B4 (11 bits away from this cluster)

Group of orthologs #2092. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.ramorum:1

A8HSU4              	100.00%		H3G9V1              	100.00%
Bootstrap support for A8HSU4 as seed ortholog is 100%.
Bootstrap support for H3G9V1 as seed ortholog is 47%.
Alternative seed ortholog is H3G754 (1 bits away from this cluster)

Group of orthologs #2093. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.ramorum:65

A8JFF8              	100.00%		H3HBC0              	100.00%
Bootstrap support for A8JFF8 as seed ortholog is 54%.
Alternative seed ortholog is A8HWZ8 (3 bits away from this cluster)
Bootstrap support for H3HBC0 as seed ortholog is 100%.

Group of orthologs #2094. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8HZS9              	100.00%		H3GQ53              	100.00%
A8J5L1              	9.63%		H3GQ50              	38.33%
A8I2T4              	8.08%		H3HBW0              	12.94%
A8HPJ1              	6.32%		H3GHV8              	12.78%
A8HTF7              	6.32%		
A8I6C4              	6.17%		
A8I7H3              	5.95%		
A8IP46              	5.14%		
Bootstrap support for A8HZS9 as seed ortholog is 100%.
Bootstrap support for H3GQ53 as seed ortholog is 100%.

Group of orthologs #2095. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.ramorum:64

A8IZR5              	100.00%		H3H1L1              	100.00%
A8IYP5              	15.34%		
Q84XS0              	13.50%		
Q84XR8              	8.59%		
Bootstrap support for A8IZR5 as seed ortholog is 80%.
Bootstrap support for H3H1L1 as seed ortholog is 100%.

Group of orthologs #2096. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8ITL8              	100.00%		H3GH39              	100.00%
                    	       		H3H988              	77.48%
Bootstrap support for A8ITL8 as seed ortholog is 100%.
Bootstrap support for H3GH39 as seed ortholog is 100%.

Group of orthologs #2097. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8J3A5              	100.00%		H3GBR3              	100.00%
A8IRF2              	12.83%		
Bootstrap support for A8J3A5 as seed ortholog is 100%.
Bootstrap support for H3GBR3 as seed ortholog is 100%.

Group of orthologs #2098. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8IYX9              	100.00%		H3G587              	100.00%
Bootstrap support for A8IYX9 as seed ortholog is 100%.
Bootstrap support for H3G587 as seed ortholog is 100%.

Group of orthologs #2099. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8IAF7              	100.00%		H3GRV2              	100.00%
Bootstrap support for A8IAF7 as seed ortholog is 100%.
Bootstrap support for H3GRV2 as seed ortholog is 100%.

Group of orthologs #2100. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8JIA4              	100.00%		H3GHM5              	100.00%
Bootstrap support for A8JIA4 as seed ortholog is 100%.
Bootstrap support for H3GHM5 as seed ortholog is 100%.

Group of orthologs #2101. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.ramorum:64

A8J9C3              	100.00%		H3HEF9              	100.00%
Bootstrap support for A8J9C3 as seed ortholog is 100%.
Bootstrap support for H3HEF9 as seed ortholog is 100%.

Group of orthologs #2102. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8JD31              	100.00%		H3GER7              	100.00%
A8HXB2              	6.73%		H3GE05              	7.52%
                    	       		H3H040              	7.31%
Bootstrap support for A8JD31 as seed ortholog is 100%.
Bootstrap support for H3GER7 as seed ortholog is 100%.

Group of orthologs #2103. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8IMX2              	100.00%		H3HA61              	100.00%
                    	       		H3GJN2              	99.20%
Bootstrap support for A8IMX2 as seed ortholog is 100%.
Bootstrap support for H3HA61 as seed ortholog is 100%.

Group of orthologs #2104. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8HQ64              	100.00%		H3GH19              	100.00%
Bootstrap support for A8HQ64 as seed ortholog is 100%.
Bootstrap support for H3GH19 as seed ortholog is 100%.

Group of orthologs #2105. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8IA65              	100.00%		H3GMC6              	100.00%
Bootstrap support for A8IA65 as seed ortholog is 100%.
Bootstrap support for H3GMC6 as seed ortholog is 100%.

Group of orthologs #2106. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8HMJ6              	100.00%		H3HCR7              	100.00%
Bootstrap support for A8HMJ6 as seed ortholog is 100%.
Bootstrap support for H3HCR7 as seed ortholog is 100%.

Group of orthologs #2107. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8J6W0              	100.00%		H3GPE6              	100.00%
Bootstrap support for A8J6W0 as seed ortholog is 100%.
Bootstrap support for H3GPE6 as seed ortholog is 100%.

Group of orthologs #2108. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:0 P.ramorum:63

A8IZD8              	100.00%		H3HA50              	100.00%
Bootstrap support for A8IZD8 as seed ortholog is 52%.
Alternative seed ortholog is A8I8K4 (0 bits away from this cluster)
Bootstrap support for H3HA50 as seed ortholog is 100%.

Group of orthologs #2109. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.ramorum:63

A8JC42              	100.00%		H3H1H2              	100.00%
Bootstrap support for A8JC42 as seed ortholog is 100%.
Bootstrap support for H3H1H2 as seed ortholog is 100%.

Group of orthologs #2110. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8JE78              	100.00%		H3GB37              	100.00%
                    	       		H3H1Y5              	97.08%
                    	       		H3GAM1              	95.00%
                    	       		H3H0D0              	71.67%
                    	       		H3H0D4              	43.33%
                    	       		H3GAF6              	28.75%
                    	       		H3GAF5              	28.33%
                    	       		H3H0C9              	24.17%
                    	       		H3GB54              	21.25%
                    	       		H3GLZ1              	18.33%
                    	       		H3HC53              	10.42%
Bootstrap support for A8JE78 as seed ortholog is 100%.
Bootstrap support for H3GB37 as seed ortholog is 100%.

Group of orthologs #2111. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8IEC1              	100.00%		H3HB04              	100.00%
A8J3J0              	10.48%		
A8IQA5              	9.66%		
Bootstrap support for A8IEC1 as seed ortholog is 100%.
Bootstrap support for H3HB04 as seed ortholog is 100%.

Group of orthologs #2112. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8I3U7              	100.00%		H3GAX8              	100.00%
A8I501              	100.00%		
Bootstrap support for A8I3U7 as seed ortholog is 100%.
Bootstrap support for A8I501 as seed ortholog is 100%.
Bootstrap support for H3GAX8 as seed ortholog is 100%.

Group of orthologs #2113. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8ISE8              	100.00%		H3GD60              	100.00%
A8IST1              	22.07%		
Bootstrap support for A8ISE8 as seed ortholog is 100%.
Bootstrap support for H3GD60 as seed ortholog is 100%.

Group of orthologs #2114. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8HMQ9              	100.00%		H3GZB6              	100.00%
A8J7F0              	8.02%		
Bootstrap support for A8HMQ9 as seed ortholog is 100%.
Bootstrap support for H3GZB6 as seed ortholog is 100%.

Group of orthologs #2115. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8IDE9              	100.00%		H3GDV9              	100.00%
Bootstrap support for A8IDE9 as seed ortholog is 100%.
Bootstrap support for H3GDV9 as seed ortholog is 100%.

Group of orthologs #2116. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.ramorum:62

A8JC13              	100.00%		H3G7Y6              	100.00%
Bootstrap support for A8JC13 as seed ortholog is 100%.
Bootstrap support for H3G7Y6 as seed ortholog is 100%.

Group of orthologs #2117. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:4

A8HPC9              	100.00%		H3GJ69              	100.00%
Bootstrap support for A8HPC9 as seed ortholog is 100%.
Bootstrap support for H3GJ69 as seed ortholog is 53%.
Alternative seed ortholog is H3GJN6 (4 bits away from this cluster)

Group of orthologs #2118. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8HN56              	100.00%		H3GQ84              	100.00%
Bootstrap support for A8HN56 as seed ortholog is 100%.
Bootstrap support for H3GQ84 as seed ortholog is 100%.

Group of orthologs #2119. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8IWI1              	100.00%		H3GIR9              	100.00%
Bootstrap support for A8IWI1 as seed ortholog is 100%.
Bootstrap support for H3GIR9 as seed ortholog is 100%.

Group of orthologs #2120. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8IMY7              	100.00%		H3GNX7              	100.00%
Bootstrap support for A8IMY7 as seed ortholog is 100%.
Bootstrap support for H3GNX7 as seed ortholog is 100%.

Group of orthologs #2121. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8J403              	100.00%		H3GGS2              	100.00%
Bootstrap support for A8J403 as seed ortholog is 100%.
Bootstrap support for H3GGS2 as seed ortholog is 100%.

Group of orthologs #2122. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8J211              	100.00%		H3GMP5              	100.00%
Bootstrap support for A8J211 as seed ortholog is 100%.
Bootstrap support for H3GMP5 as seed ortholog is 100%.

Group of orthologs #2123. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8IY84              	100.00%		H3GRS5              	100.00%
Bootstrap support for A8IY84 as seed ortholog is 100%.
Bootstrap support for H3GRS5 as seed ortholog is 100%.

Group of orthologs #2124. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.ramorum:61

A8I127              	100.00%		H3H8S4              	100.00%
Bootstrap support for A8I127 as seed ortholog is 55%.
Alternative seed ortholog is A8ICT7 (4 bits away from this cluster)
Bootstrap support for H3H8S4 as seed ortholog is 100%.

Group of orthologs #2125. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8HSR3              	100.00%		H3HED4              	100.00%
Bootstrap support for A8HSR3 as seed ortholog is 100%.
Bootstrap support for H3HED4 as seed ortholog is 100%.

Group of orthologs #2126. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.ramorum:61

A8J8Q3              	100.00%		H3HDF1              	100.00%
Bootstrap support for A8J8Q3 as seed ortholog is 100%.
Bootstrap support for H3HDF1 as seed ortholog is 100%.

Group of orthologs #2127. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.ramorum:60

A8JHP9              	100.00%		H3GPN9              	100.00%
A8J074              	20.65%		
Bootstrap support for A8JHP9 as seed ortholog is 100%.
Bootstrap support for H3GPN9 as seed ortholog is 100%.

Group of orthologs #2128. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.ramorum:60

A8JA99              	100.00%		H3H715              	100.00%
A8JFC1              	31.27%		
Bootstrap support for A8JA99 as seed ortholog is 100%.
Bootstrap support for H3H715 as seed ortholog is 100%.

Group of orthologs #2129. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.ramorum:60

A8IWT7              	100.00%		H3GM18              	100.00%
Bootstrap support for A8IWT7 as seed ortholog is 100%.
Bootstrap support for H3GM18 as seed ortholog is 100%.

Group of orthologs #2130. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.ramorum:60

A8JGI7              	100.00%		H3HCQ9              	100.00%
Bootstrap support for A8JGI7 as seed ortholog is 100%.
Bootstrap support for H3HCQ9 as seed ortholog is 100%.

Group of orthologs #2131. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:59

A8ITN4              	100.00%		H3G5L6              	100.00%
Bootstrap support for A8ITN4 as seed ortholog is 100%.
Bootstrap support for H3G5L6 as seed ortholog is 100%.

Group of orthologs #2132. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:59

A8IC41              	100.00%		H3GTA1              	100.00%
Bootstrap support for A8IC41 as seed ortholog is 100%.
Bootstrap support for H3GTA1 as seed ortholog is 100%.

Group of orthologs #2133. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:59

A8IQW4              	100.00%		H3H111              	100.00%
Bootstrap support for A8IQW4 as seed ortholog is 100%.
Bootstrap support for H3H111 as seed ortholog is 100%.

Group of orthologs #2134. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:59

A8J2B7              	100.00%		H3GTR5              	100.00%
Bootstrap support for A8J2B7 as seed ortholog is 100%.
Bootstrap support for H3GTR5 as seed ortholog is 100%.

Group of orthologs #2135. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:59

A8IR08              	100.00%		H3H8F6              	100.00%
Bootstrap support for A8IR08 as seed ortholog is 100%.
Bootstrap support for H3H8F6 as seed ortholog is 100%.

Group of orthologs #2136. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.ramorum:59

A8JI30              	100.00%		H3GSW8              	100.00%
Bootstrap support for A8JI30 as seed ortholog is 43%.
Alternative seed ortholog is Q84X80 (11 bits away from this cluster)
Bootstrap support for H3GSW8 as seed ortholog is 100%.

Group of orthologs #2137. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.ramorum:59

Q6UKY7              	100.00%		H3HEC2              	100.00%
Bootstrap support for Q6UKY7 as seed ortholog is 100%.
Bootstrap support for H3HEC2 as seed ortholog is 100%.

Group of orthologs #2138. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.ramorum:58

A8I205              	100.00%		H3GZT8              	100.00%
A8I202              	84.08%		
Bootstrap support for A8I205 as seed ortholog is 100%.
Bootstrap support for H3GZT8 as seed ortholog is 100%.

Group of orthologs #2139. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.ramorum:58

A8J9E7              	100.00%		H3H1R0              	100.00%
Bootstrap support for A8J9E7 as seed ortholog is 100%.
Bootstrap support for H3H1R0 as seed ortholog is 100%.

Group of orthologs #2140. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:57

A8JDU6              	100.00%		H3GZG8              	100.00%
A8IN84              	34.80%		
Bootstrap support for A8JDU6 as seed ortholog is 100%.
Bootstrap support for H3GZG8 as seed ortholog is 100%.

Group of orthologs #2141. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:57

Q6UP28              	100.00%		H3GZU3              	100.00%
                    	       		H3GZV0              	23.21%
Bootstrap support for Q6UP28 as seed ortholog is 100%.
Bootstrap support for H3GZU3 as seed ortholog is 100%.

Group of orthologs #2142. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:57

A8IWT4              	100.00%		H3G8Q9              	100.00%
Bootstrap support for A8IWT4 as seed ortholog is 100%.
Bootstrap support for H3G8Q9 as seed ortholog is 100%.

Group of orthologs #2143. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:57

A8IRU4              	100.00%		H3GGJ3              	100.00%
Bootstrap support for A8IRU4 as seed ortholog is 100%.
Bootstrap support for H3GGJ3 as seed ortholog is 100%.

Group of orthologs #2144. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.ramorum:57

A8JH64              	100.00%		H3GTM2              	100.00%
Bootstrap support for A8JH64 as seed ortholog is 100%.
Bootstrap support for H3GTM2 as seed ortholog is 100%.

Group of orthologs #2145. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.ramorum:56

A8JD04              	100.00%		H3G5W1              	100.00%
                    	       		H3G6H9              	8.96%
Bootstrap support for A8JD04 as seed ortholog is 100%.
Bootstrap support for H3G5W1 as seed ortholog is 100%.

Group of orthologs #2146. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.ramorum:56

A8HPE2              	100.00%		H3GKR8              	100.00%
Bootstrap support for A8HPE2 as seed ortholog is 100%.
Bootstrap support for H3GKR8 as seed ortholog is 100%.

Group of orthologs #2147. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.ramorum:56

A8J8N9              	100.00%		H3G5I4              	100.00%
Bootstrap support for A8J8N9 as seed ortholog is 100%.
Bootstrap support for H3G5I4 as seed ortholog is 100%.

Group of orthologs #2148. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.ramorum:56

A8IVK8              	100.00%		H3HBK9              	100.00%
Bootstrap support for A8IVK8 as seed ortholog is 100%.
Bootstrap support for H3HBK9 as seed ortholog is 100%.

Group of orthologs #2149. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.ramorum:55

A8JA62              	100.00%		H3GTI7              	100.00%
A8JA57              	95.30%		H3GTI6              	41.90%
A8JA58              	62.13%		H3GM45              	25.71%
A8JA61              	61.63%		H3H6P8              	23.81%
A8JHS1              	32.43%		H3H173              	11.90%
A8HPJ5              	31.19%		H3H5N0              	8.10%
Bootstrap support for A8JA62 as seed ortholog is 49%.
Alternative seed ortholog is A8IN25 (1 bits away from this cluster)
Bootstrap support for H3GTI7 as seed ortholog is 100%.

Group of orthologs #2150. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:55

A8J9U4              	100.00%		H3G4Y6              	100.00%
                    	       		H3GQG2              	40.00%
                    	       		H3H1Q8              	21.94%
Bootstrap support for A8J9U4 as seed ortholog is 100%.
Bootstrap support for H3G4Y6 as seed ortholog is 100%.

Group of orthologs #2151. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:13

A8I9Q3              	100.00%		H3GI31              	100.00%
Bootstrap support for A8I9Q3 as seed ortholog is 100%.
Bootstrap support for H3GI31 as seed ortholog is 64%.
Alternative seed ortholog is H3H3Y3 (13 bits away from this cluster)

Group of orthologs #2152. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:55

A8HQA7              	100.00%		H3GY39              	100.00%
Bootstrap support for A8HQA7 as seed ortholog is 100%.
Bootstrap support for H3GY39 as seed ortholog is 100%.

Group of orthologs #2153. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:55

A8JH84              	100.00%		H3GYM3              	100.00%
Bootstrap support for A8JH84 as seed ortholog is 100%.
Bootstrap support for H3GYM3 as seed ortholog is 100%.

Group of orthologs #2154. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.ramorum:55

Q6UKY3              	100.00%		H3HBE7              	100.00%
Bootstrap support for Q6UKY3 as seed ortholog is 100%.
Bootstrap support for H3HBE7 as seed ortholog is 100%.

Group of orthologs #2155. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.ramorum:54

A8IYR3              	100.00%		H3GQE7              	100.00%
A8JBS0              	9.19%		
A8J846              	5.06%		
Bootstrap support for A8IYR3 as seed ortholog is 71%.
Alternative seed ortholog is A8ITY1 (7 bits away from this cluster)
Bootstrap support for H3GQE7 as seed ortholog is 100%.

Group of orthologs #2156. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:54

A8HUW1              	100.00%		H3G6K5              	100.00%
Bootstrap support for A8HUW1 as seed ortholog is 100%.
Bootstrap support for H3G6K5 as seed ortholog is 100%.

Group of orthologs #2157. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:54

A8HTL0              	100.00%		H3GW60              	100.00%
Bootstrap support for A8HTL0 as seed ortholog is 100%.
Bootstrap support for H3GW60 as seed ortholog is 100%.

Group of orthologs #2158. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:54

A8I9A1              	100.00%		H3H102              	100.00%
Bootstrap support for A8I9A1 as seed ortholog is 100%.
Bootstrap support for H3H102 as seed ortholog is 100%.

Group of orthologs #2159. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:54

A8JHJ4              	100.00%		H3GE35              	100.00%
Bootstrap support for A8JHJ4 as seed ortholog is 100%.
Bootstrap support for H3GE35 as seed ortholog is 100%.

Group of orthologs #2160. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.ramorum:54

A8J936              	100.00%		H3GSH0              	100.00%
Bootstrap support for A8J936 as seed ortholog is 100%.
Bootstrap support for H3GSH0 as seed ortholog is 100%.

Group of orthologs #2161. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:53

A8IMX5              	100.00%		H3GD52              	100.00%
                    	       		H3HCV0              	6.81%
Bootstrap support for A8IMX5 as seed ortholog is 100%.
Bootstrap support for H3GD52 as seed ortholog is 100%.

Group of orthologs #2162. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:53

A8ITB1              	100.00%		H3HDH7              	100.00%
A8JA20              	9.63%		
Bootstrap support for A8ITB1 as seed ortholog is 100%.
Bootstrap support for H3HDH7 as seed ortholog is 100%.

Group of orthologs #2163. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:53

A8JCH7              	100.00%		H3G9L8              	100.00%
Bootstrap support for A8JCH7 as seed ortholog is 100%.
Bootstrap support for H3G9L8 as seed ortholog is 100%.

Group of orthologs #2164. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:53

A8J228              	100.00%		H3GLQ8              	100.00%
Bootstrap support for A8J228 as seed ortholog is 100%.
Bootstrap support for H3GLQ8 as seed ortholog is 100%.

Group of orthologs #2165. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:53

A8IYP3              	100.00%		H3GUU8              	100.00%
Bootstrap support for A8IYP3 as seed ortholog is 100%.
Bootstrap support for H3GUU8 as seed ortholog is 100%.

Group of orthologs #2166. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.ramorum:53

A8J8W7              	100.00%		H3HB38              	100.00%
Bootstrap support for A8J8W7 as seed ortholog is 100%.
Bootstrap support for H3HB38 as seed ortholog is 100%.

Group of orthologs #2167. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8IB85              	100.00%		H3H5P6              	100.00%
A8IBH3              	31.12%		H3H0H5              	98.76%
A8IB37              	26.76%		H3GXF0              	7.82%
A8IHH1              	26.68%		H3GYW8              	5.77%
A8IT92              	24.73%		H3GSX3              	5.28%
A8JFK7              	23.71%		
A8HPB6              	21.53%		
Q9ATG5              	21.53%		
A8ISJ6              	21.37%		
A8HPB7              	17.78%		
A8I963              	16.46%		
Bootstrap support for A8IB85 as seed ortholog is 100%.
Bootstrap support for H3H5P6 as seed ortholog is 100%.

Group of orthologs #2168. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8J9L1              	100.00%		H3GIU9              	100.00%
A8J7R9              	24.64%		H3GYP3              	39.96%
A8J2K9              	20.34%		
Bootstrap support for A8J9L1 as seed ortholog is 100%.
Bootstrap support for H3GIU9 as seed ortholog is 100%.

Group of orthologs #2169. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8HUC9              	100.00%		H3H328              	100.00%
A8JDX3              	27.61%		H3H329              	49.18%
Bootstrap support for A8HUC9 as seed ortholog is 100%.
Bootstrap support for H3H328 as seed ortholog is 100%.

Group of orthologs #2170. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8JFZ6              	100.00%		H3H8H6              	100.00%
A8J1C7              	28.65%		
A8JJZ9              	13.53%		
Bootstrap support for A8JFZ6 as seed ortholog is 100%.
Bootstrap support for H3H8H6 as seed ortholog is 100%.

Group of orthologs #2171. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8IZI4              	100.00%		H3GFQ8              	100.00%
A8J6P1              	6.34%		
Bootstrap support for A8IZI4 as seed ortholog is 100%.
Bootstrap support for H3GFQ8 as seed ortholog is 100%.

Group of orthologs #2172. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.ramorum:52

A8I1P7              	100.00%		H3GNZ1              	100.00%
Bootstrap support for A8I1P7 as seed ortholog is 100%.
Bootstrap support for H3GNZ1 as seed ortholog is 100%.

Group of orthologs #2173. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:51

A8JGR1              	100.00%		H3GLX7              	100.00%
                    	       		H3GLX8              	10.00%
Bootstrap support for A8JGR1 as seed ortholog is 100%.
Bootstrap support for H3GLX7 as seed ortholog is 100%.

Group of orthologs #2174. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:51

A8HQ12              	100.00%		H3GME5              	100.00%
Bootstrap support for A8HQ12 as seed ortholog is 100%.
Bootstrap support for H3GME5 as seed ortholog is 100%.

Group of orthologs #2175. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:51

A8J4K7              	100.00%		H3G6V0              	100.00%
Bootstrap support for A8J4K7 as seed ortholog is 100%.
Bootstrap support for H3G6V0 as seed ortholog is 100%.

Group of orthologs #2176. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.ramorum:51

A8HTT6              	100.00%		H3HD77              	100.00%
Bootstrap support for A8HTT6 as seed ortholog is 100%.
Bootstrap support for H3HD77 as seed ortholog is 100%.

Group of orthologs #2177. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8J863              	100.00%		H3GP18              	100.00%
A8J861              	46.75%		
A8I8K6              	41.12%		
A8IT77              	29.29%		
A8I8K3              	27.61%		
A8IT91              	26.15%		
Bootstrap support for A8J863 as seed ortholog is 100%.
Bootstrap support for H3GP18 as seed ortholog is 100%.

Group of orthologs #2178. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8IUG8              	100.00%		H3GIA1              	100.00%
                    	       		H3HBL1              	70.21%
Bootstrap support for A8IUG8 as seed ortholog is 100%.
Bootstrap support for H3GIA1 as seed ortholog is 100%.

Group of orthologs #2179. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8J9Y0              	100.00%		H3GAB9              	100.00%
                    	       		H3GZH9              	50.12%
Bootstrap support for A8J9Y0 as seed ortholog is 100%.
Bootstrap support for H3GAB9 as seed ortholog is 100%.

Group of orthologs #2180. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8HP00              	100.00%		H3G7S2              	100.00%
Bootstrap support for A8HP00 as seed ortholog is 100%.
Bootstrap support for H3G7S2 as seed ortholog is 100%.

Group of orthologs #2181. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8IWY7              	100.00%		H3GFH3              	100.00%
Bootstrap support for A8IWY7 as seed ortholog is 100%.
Bootstrap support for H3GFH3 as seed ortholog is 100%.

Group of orthologs #2182. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.ramorum:50

A8J7Q7              	100.00%		H3GBL7              	100.00%
Bootstrap support for A8J7Q7 as seed ortholog is 60%.
Alternative seed ortholog is A8IWN6 (8 bits away from this cluster)
Bootstrap support for H3GBL7 as seed ortholog is 100%.

Group of orthologs #2183. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8IW44              	100.00%		H3GRN6              	100.00%
Bootstrap support for A8IW44 as seed ortholog is 100%.
Bootstrap support for H3GRN6 as seed ortholog is 100%.

Group of orthologs #2184. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8IT23              	100.00%		H3GWK0              	100.00%
Bootstrap support for A8IT23 as seed ortholog is 100%.
Bootstrap support for H3GWK0 as seed ortholog is 100%.

Group of orthologs #2185. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8HPU2              	100.00%		H3HBU1              	100.00%
Bootstrap support for A8HPU2 as seed ortholog is 100%.
Bootstrap support for H3HBU1 as seed ortholog is 100%.

Group of orthologs #2186. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8JHD2              	100.00%		H3GD79              	100.00%
Bootstrap support for A8JHD2 as seed ortholog is 100%.
Bootstrap support for H3GD79 as seed ortholog is 100%.

Group of orthologs #2187. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8JEE6              	100.00%		H3GXR6              	100.00%
Bootstrap support for A8JEE6 as seed ortholog is 100%.
Bootstrap support for H3GXR6 as seed ortholog is 100%.

Group of orthologs #2188. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8JF05              	100.00%		H3GXK3              	100.00%
Bootstrap support for A8JF05 as seed ortholog is 100%.
Bootstrap support for H3GXK3 as seed ortholog is 100%.

Group of orthologs #2189. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.ramorum:50

A8IYS2              	100.00%		H3HCV3              	100.00%
Bootstrap support for A8IYS2 as seed ortholog is 100%.
Bootstrap support for H3HCV3 as seed ortholog is 100%.

Group of orthologs #2190. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:49

A8JJL7              	100.00%		H3H4F7              	100.00%
A8IEA7              	41.24%		H3GTD9              	15.35%
A8J4K1              	26.46%		H3H6Z5              	10.96%
A8IZW7              	24.22%		H3GPX6              	9.61%
A8IZ11              	23.35%		H3HCI6              	9.44%
A8IVQ3              	19.01%		H3GRU0              	9.27%
A8JED9              	18.14%		H3GSZ5              	8.43%
A8JEE8              	17.76%		H3GZD6              	7.42%
A8JED6              	17.14%		H3HD86              	7.25%
A8JDW8              	16.89%		H3GU64              	6.91%
A8J8F9              	15.16%		H3H533              	6.91%
A8J3Q1              	15.03%		H3GXX0              	6.07%
A8J0H3              	14.53%		H3GUJ4              	5.56%
A8IEN2              	14.16%		H3GU66              	5.40%
A8JAV2              	13.54%		
A8ICJ3              	13.17%		
A8JFH4              	13.04%		
A8JDU4              	11.30%		
A8JDW0              	11.18%		
A8ISN4              	10.31%		
A8JEV4              	8.82%		
A8HP24              	8.20%		
A8JDU3              	7.95%		
A8JEV5              	7.45%		
A8JFV2              	5.71%		
A8JGN9              	5.34%		
Bootstrap support for A8JJL7 as seed ortholog is 100%.
Bootstrap support for H3H4F7 as seed ortholog is 100%.

Group of orthologs #2191. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:49

A8IXV3              	100.00%		H3GCT5              	100.00%
                    	       		H3H2D7              	100.00%
                    	       		H3GBT4              	19.72%
                    	       		H3H2E1              	15.02%
                    	       		H3H2E6              	14.79%
                    	       		H3H2E3              	14.55%
                    	       		H3GUJ1              	9.39%
                    	       		H3H4J3              	7.75%
                    	       		H3GCT6              	7.04%
Bootstrap support for A8IXV3 as seed ortholog is 100%.
Bootstrap support for H3GCT5 as seed ortholog is 100%.
Bootstrap support for H3H2D7 as seed ortholog is 100%.

Group of orthologs #2192. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:49

A8ITF4              	100.00%		H3GKT5              	100.00%
                    	       		H3HBU5              	75.25%
Bootstrap support for A8ITF4 as seed ortholog is 100%.
Bootstrap support for H3GKT5 as seed ortholog is 100%.

Group of orthologs #2193. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:49

A8HM66              	100.00%		H3GUZ8              	100.00%
Bootstrap support for A8HM66 as seed ortholog is 100%.
Bootstrap support for H3GUZ8 as seed ortholog is 100%.

Group of orthologs #2194. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.ramorum:49

A8IQR6              	100.00%		H3HAV3              	100.00%
Bootstrap support for A8IQR6 as seed ortholog is 100%.
Bootstrap support for H3HAV3 as seed ortholog is 100%.

Group of orthologs #2195. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.ramorum:48

A8IGB2              	100.00%		H3HAM0              	100.00%
A8J9J2              	21.01%		
Bootstrap support for A8IGB2 as seed ortholog is 100%.
Bootstrap support for H3HAM0 as seed ortholog is 100%.

Group of orthologs #2196. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.ramorum:48

A8JFQ2              	100.00%		H3GTW7              	100.00%
Bootstrap support for A8JFQ2 as seed ortholog is 100%.
Bootstrap support for H3GTW7 as seed ortholog is 100%.

Group of orthologs #2197. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:47

A8HQ84              	100.00%		H3HEE7              	100.00%
Bootstrap support for A8HQ84 as seed ortholog is 100%.
Bootstrap support for H3HEE7 as seed ortholog is 100%.

Group of orthologs #2198. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:47

A8IT98              	100.00%		H3HC10              	100.00%
Bootstrap support for A8IT98 as seed ortholog is 100%.
Bootstrap support for H3HC10 as seed ortholog is 100%.

Group of orthologs #2199. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:47

A8JDU1              	100.00%		H3H2B3              	100.00%
Bootstrap support for A8JDU1 as seed ortholog is 100%.
Bootstrap support for H3H2B3 as seed ortholog is 100%.

Group of orthologs #2200. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:47

A8JCG8              	100.00%		H3H420              	100.00%
Bootstrap support for A8JCG8 as seed ortholog is 100%.
Bootstrap support for H3H420 as seed ortholog is 100%.

Group of orthologs #2201. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:47

A8JIV5              	100.00%		H3H7K0              	100.00%
Bootstrap support for A8JIV5 as seed ortholog is 100%.
Bootstrap support for H3H7K0 as seed ortholog is 100%.

Group of orthologs #2202. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.ramorum:47

Q9FYV4              	100.00%		H3HCB0              	100.00%
Bootstrap support for Q9FYV4 as seed ortholog is 100%.
Bootstrap support for H3HCB0 as seed ortholog is 100%.

Group of orthologs #2203. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.ramorum:46

A8IT68              	100.00%		H3GC31              	100.00%
Bootstrap support for A8IT68 as seed ortholog is 100%.
Bootstrap support for H3GC31 as seed ortholog is 100%.

Group of orthologs #2204. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.ramorum:46

A8JEG3              	100.00%		H3GJV4              	100.00%
Bootstrap support for A8JEG3 as seed ortholog is 100%.
Bootstrap support for H3GJV4 as seed ortholog is 100%.

Group of orthologs #2205. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:45

A8HSK5              	100.00%		H3GU97              	100.00%
                    	       		H3GU98              	55.45%
                    	       		H3GU99              	49.29%
                    	       		H3GUH3              	13.98%
Bootstrap support for A8HSK5 as seed ortholog is 100%.
Bootstrap support for H3GU97 as seed ortholog is 100%.

Group of orthologs #2206. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:45

A8II92              	100.00%		H3GL90              	100.00%
A8J664              	5.94%		
Bootstrap support for A8II92 as seed ortholog is 100%.
Bootstrap support for H3GL90 as seed ortholog is 100%.

Group of orthologs #2207. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:45

A8IRQ3              	100.00%		H3GU63              	100.00%
Bootstrap support for A8IRQ3 as seed ortholog is 100%.
Bootstrap support for H3GU63 as seed ortholog is 100%.

Group of orthologs #2208. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.ramorum:45

Q6UKY8              	100.00%		H3GH69              	100.00%
Bootstrap support for Q6UKY8 as seed ortholog is 100%.
Bootstrap support for H3GH69 as seed ortholog is 100%.

Group of orthologs #2209. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:44

A8J2I0              	100.00%		H3HBL5              	100.00%
A8IDT8              	8.68%		
Bootstrap support for A8J2I0 as seed ortholog is 100%.
Bootstrap support for H3HBL5 as seed ortholog is 100%.

Group of orthologs #2210. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:44

A8HQK8              	100.00%		H3GIB4              	100.00%
Bootstrap support for A8HQK8 as seed ortholog is 100%.
Bootstrap support for H3GIB4 as seed ortholog is 100%.

Group of orthologs #2211. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:44

A8IJC4              	100.00%		H3GWW4              	100.00%
Bootstrap support for A8IJC4 as seed ortholog is 100%.
Bootstrap support for H3GWW4 as seed ortholog is 100%.

Group of orthologs #2212. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:44

A8JHY3              	100.00%		H3GE26              	100.00%
Bootstrap support for A8JHY3 as seed ortholog is 100%.
Bootstrap support for H3GE26 as seed ortholog is 100%.

Group of orthologs #2213. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.ramorum:44

A8J2L9              	100.00%		H3HDA5              	100.00%
Bootstrap support for A8J2L9 as seed ortholog is 100%.
Bootstrap support for H3HDA5 as seed ortholog is 100%.

Group of orthologs #2214. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.ramorum:1

Q9M5D4              	100.00%		H3HCC8              	100.00%
A8I225              	14.06%		H3GNE7              	89.04%
A8J0X1              	6.47%		H3H7S0              	13.19%
A8JCC0              	5.80%		H3H545              	12.30%
                    	       		H3H544              	8.30%
Bootstrap support for Q9M5D4 as seed ortholog is 100%.
Bootstrap support for H3HCC8 as seed ortholog is 51%.
Alternative seed ortholog is H3H551 (1 bits away from this cluster)

Group of orthologs #2215. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.ramorum:42

A8JDK2              	100.00%		H3H5Y8              	100.00%
                    	       		H3H5Y9              	77.31%
                    	       		H3GPS1              	59.16%
                    	       		H3GPS3              	58.83%
                    	       		H3GPS2              	58.35%
                    	       		H3GPS0              	57.54%
Bootstrap support for A8JDK2 as seed ortholog is 100%.
Bootstrap support for H3H5Y8 as seed ortholog is 100%.

Group of orthologs #2216. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.ramorum:41

A8ICY6              	100.00%		H3GTW0              	100.00%
A8ICY4              	36.60%		H3GM08              	62.08%
Bootstrap support for A8ICY6 as seed ortholog is 100%.
Bootstrap support for H3GTW0 as seed ortholog is 100%.

Group of orthologs #2217. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:40

A8HMH0              	100.00%		H3GQZ4              	100.00%
Bootstrap support for A8HMH0 as seed ortholog is 100%.
Bootstrap support for H3GQZ4 as seed ortholog is 100%.

Group of orthologs #2218. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:40

A8IGW2              	100.00%		H3GET2              	100.00%
Bootstrap support for A8IGW2 as seed ortholog is 100%.
Bootstrap support for H3GET2 as seed ortholog is 100%.

Group of orthologs #2219. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.ramorum:40

A8IB52              	100.00%		H3H3L2              	100.00%
Bootstrap support for A8IB52 as seed ortholog is 100%.
Bootstrap support for H3H3L2 as seed ortholog is 100%.