###################################
409 groups of orthologs
646 in-paralogs from C.reinhardtii
452 in-paralogs from P.aerophilum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 763 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:763

A8I9Z6              	100.00%		Q8ZYQ9              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 77%.
Bootstrap support for Q8ZYQ9 as seed ortholog is 100%.

Group of orthologs #2. Best score 744 bits
Score difference with first non-orthologous sequence - C.reinhardtii:744 P.aerophilum:624

A8IC95              	100.00%		Q8ZT84              	100.00%
A8IW49              	26.10%		
Bootstrap support for A8IC95 as seed ortholog is 100%.
Bootstrap support for Q8ZT84 as seed ortholog is 100%.

Group of orthologs #3. Best score 639 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.aerophilum:639

A8HW56              	100.00%		Q8ZTN5              	100.00%
                    	       		Q8ZYN4              	34.08%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for Q8ZTN5 as seed ortholog is 100%.

Group of orthologs #4. Best score 547 bits
Score difference with first non-orthologous sequence - C.reinhardtii:448 P.aerophilum:249

A8JCQ8              	100.00%		O93730              	100.00%
A8JCV8              	36.91%		
A8JFR9              	31.65%		
Bootstrap support for A8JCQ8 as seed ortholog is 100%.
Bootstrap support for O93730 as seed ortholog is 100%.

Group of orthologs #5. Best score 482 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.aerophilum:482

A8JHX9              	100.00%		Q8ZZC1              	100.00%
A8JCA8              	6.59%		
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for Q8ZZC1 as seed ortholog is 100%.

Group of orthologs #6. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 P.aerophilum:394

A8J9F3              	100.00%		Q8ZWU4              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 99%.
Bootstrap support for Q8ZWU4 as seed ortholog is 100%.

Group of orthologs #7. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:456 P.aerophilum:456

A8JIR0              	100.00%		Q8ZY48              	100.00%
Bootstrap support for A8JIR0 as seed ortholog is 100%.
Bootstrap support for Q8ZY48 as seed ortholog is 100%.

Group of orthologs #8. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 P.aerophilum:453

A8IA45              	100.00%		Q8ZXR2              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for Q8ZXR2 as seed ortholog is 100%.

Group of orthologs #9. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.aerophilum:452

A8I164              	100.00%		Q8ZYR1              	100.00%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for Q8ZYR1 as seed ortholog is 100%.

Group of orthologs #10. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:452 P.aerophilum:452

A8IX80              	100.00%		Q8ZYU6              	100.00%
Bootstrap support for A8IX80 as seed ortholog is 100%.
Bootstrap support for Q8ZYU6 as seed ortholog is 100%.

Group of orthologs #11. Best score 444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 P.aerophilum:444

A8J0B0              	100.00%		Q8ZWI8              	100.00%
Bootstrap support for A8J0B0 as seed ortholog is 100%.
Bootstrap support for Q8ZWI8 as seed ortholog is 100%.

Group of orthologs #12. Best score 439 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 P.aerophilum:439

A8JC00              	100.00%		Q8ZY09              	100.00%
Bootstrap support for A8JC00 as seed ortholog is 100%.
Bootstrap support for Q8ZY09 as seed ortholog is 100%.

Group of orthologs #13. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.aerophilum:414

A8J568              	100.00%		Q8ZYQ8              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ8 as seed ortholog is 100%.

Group of orthologs #14. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.aerophilum:398

A8JCF0              	100.00%		Q8ZY88              	100.00%
Bootstrap support for A8JCF0 as seed ortholog is 56%.
Alternative seed ortholog is A8HPZ4 (10 bits away from this cluster)
Bootstrap support for Q8ZY88 as seed ortholog is 100%.

Group of orthologs #15. Best score 397 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.aerophilum:397

A8J829              	100.00%		Q8ZUJ0              	100.00%
A8JBB5              	7.24%		
Bootstrap support for A8J829 as seed ortholog is 100%.
Bootstrap support for Q8ZUJ0 as seed ortholog is 100%.

Group of orthologs #16. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.aerophilum:396

A8HP06              	100.00%		Q8ZYM0              	100.00%
Bootstrap support for A8HP06 as seed ortholog is 99%.
Bootstrap support for Q8ZYM0 as seed ortholog is 100%.

Group of orthologs #17. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 P.aerophilum:389

A8II42              	100.00%		Q8ZTF8              	100.00%
                    	       		Q8ZVU7              	30.03%
Bootstrap support for A8II42 as seed ortholog is 64%.
Alternative seed ortholog is A8J7J2 (17 bits away from this cluster)
Bootstrap support for Q8ZTF8 as seed ortholog is 100%.

Group of orthologs #18. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 P.aerophilum:387

Q84UB2              	100.00%		Q8ZT92              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for Q8ZT92 as seed ortholog is 100%.

Group of orthologs #19. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 P.aerophilum:374

A8JH52              	100.00%		Q8ZXM0              	100.00%
Bootstrap support for A8JH52 as seed ortholog is 99%.
Bootstrap support for Q8ZXM0 as seed ortholog is 100%.

Group of orthologs #20. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.aerophilum:372

A8II71              	100.00%		Q8ZWP0              	100.00%
Bootstrap support for A8II71 as seed ortholog is 45%.
Alternative seed ortholog is A8J4W8 (5 bits away from this cluster)
Bootstrap support for Q8ZWP0 as seed ortholog is 100%.

Group of orthologs #21. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.aerophilum:351

A8JG58              	100.00%		Q8ZVI3              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for Q8ZVI3 as seed ortholog is 100%.

Group of orthologs #22. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 P.aerophilum:342

A8J506              	100.00%		Q8ZU97              	100.00%
Bootstrap support for A8J506 as seed ortholog is 100%.
Bootstrap support for Q8ZU97 as seed ortholog is 100%.

Group of orthologs #23. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.aerophilum:342

A8JH25              	100.00%		O93723              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 100%.
Bootstrap support for O93723 as seed ortholog is 100%.

Group of orthologs #24. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 P.aerophilum:337

A8IZE7              	100.00%		Q8ZTZ0              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for Q8ZTZ0 as seed ortholog is 100%.

Group of orthologs #25. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.aerophilum:334

A8I8V5              	100.00%		Q8ZU56              	100.00%
Bootstrap support for A8I8V5 as seed ortholog is 99%.
Bootstrap support for Q8ZU56 as seed ortholog is 100%.

Group of orthologs #26. Best score 328 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.aerophilum:328

A8J7H3              	100.00%		Q8ZYW1              	100.00%
Bootstrap support for A8J7H3 as seed ortholog is 100%.
Bootstrap support for Q8ZYW1 as seed ortholog is 100%.

Group of orthologs #27. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 P.aerophilum:322

A8IFC8              	100.00%		Q8ZUL2              	100.00%
Bootstrap support for A8IFC8 as seed ortholog is 100%.
Bootstrap support for Q8ZUL2 as seed ortholog is 100%.

Group of orthologs #28. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.aerophilum:319

A8JGD1              	100.00%		Q8ZT48              	100.00%
Q7XXT3              	16.41%		Q8ZW33              	68.61%
Bootstrap support for A8JGD1 as seed ortholog is 100%.
Bootstrap support for Q8ZT48 as seed ortholog is 100%.

Group of orthologs #29. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:305 P.aerophilum:305

A8IXE0              	100.00%		Q8ZTQ7              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for Q8ZTQ7 as seed ortholog is 100%.

Group of orthologs #30. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.aerophilum:305

A8J280              	100.00%		O93729              	100.00%
Bootstrap support for A8J280 as seed ortholog is 53%.
Alternative seed ortholog is A8HX38 (3 bits away from this cluster)
Bootstrap support for O93729 as seed ortholog is 100%.

Group of orthologs #31. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:303

A8J7C8              	100.00%		Q8ZWD4              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 88%.
Bootstrap support for Q8ZWD4 as seed ortholog is 100%.

Group of orthologs #32. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 P.aerophilum:302

A8I232              	100.00%		Q8ZZV4              	100.00%
Bootstrap support for A8I232 as seed ortholog is 100%.
Bootstrap support for Q8ZZV4 as seed ortholog is 100%.

Group of orthologs #33. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.aerophilum:168

A8IU68              	100.00%		Q8ZVG2              	100.00%
A8IVG7              	7.77%		
Bootstrap support for A8IU68 as seed ortholog is 99%.
Bootstrap support for Q8ZVG2 as seed ortholog is 99%.

Group of orthologs #34. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.aerophilum:295

A8I980              	100.00%		Q8ZYW5              	100.00%
Bootstrap support for A8I980 as seed ortholog is 100%.
Bootstrap support for Q8ZYW5 as seed ortholog is 100%.

Group of orthologs #35. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 P.aerophilum:234

A8J4L1              	100.00%		Q8ZVC5              	100.00%
Bootstrap support for A8J4L1 as seed ortholog is 100%.
Bootstrap support for Q8ZVC5 as seed ortholog is 100%.

Group of orthologs #36. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.aerophilum:291

A8IJ19              	100.00%		Q8ZV31              	100.00%
A8JAX9              	11.48%		
Bootstrap support for A8IJ19 as seed ortholog is 63%.
Alternative seed ortholog is A8IZ49 (8 bits away from this cluster)
Bootstrap support for Q8ZV31 as seed ortholog is 100%.

Group of orthologs #37. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.aerophilum:291

A8J6M3              	100.00%		Q8ZU12              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 99%.
Bootstrap support for Q8ZU12 as seed ortholog is 100%.

Group of orthologs #38. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.aerophilum:112

A8J1T4              	100.00%		Q8ZUR5              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 93%.
Bootstrap support for Q8ZUR5 as seed ortholog is 98%.

Group of orthologs #39. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.aerophilum:287

A8J7E4              	100.00%		Q8ZWJ4              	100.00%
Bootstrap support for A8J7E4 as seed ortholog is 98%.
Bootstrap support for Q8ZWJ4 as seed ortholog is 100%.

Group of orthologs #40. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 P.aerophilum:284

A8J841              	100.00%		Q8ZZC0              	100.00%
Bootstrap support for A8J841 as seed ortholog is 100%.
Bootstrap support for Q8ZZC0 as seed ortholog is 100%.

Group of orthologs #41. Best score 281 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.aerophilum:281

A8IWJ8              	100.00%		Q8ZVF2              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for Q8ZVF2 as seed ortholog is 100%.

Group of orthologs #42. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 P.aerophilum:277

A8IRT6              	100.00%		Q8ZTP4              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for Q8ZTP4 as seed ortholog is 100%.

Group of orthologs #43. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.aerophilum:275

A8JCV0              	100.00%		Q8ZYD8              	100.00%
Bootstrap support for A8JCV0 as seed ortholog is 81%.
Bootstrap support for Q8ZYD8 as seed ortholog is 100%.

Group of orthologs #44. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.aerophilum:118

A8HS79              	100.00%		Q8ZT95              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 91%.
Bootstrap support for Q8ZT95 as seed ortholog is 99%.

Group of orthologs #45. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.aerophilum:189

A8J0X4              	100.00%		Q8ZXL3              	100.00%
Bootstrap support for A8J0X4 as seed ortholog is 100%.
Bootstrap support for Q8ZXL3 as seed ortholog is 99%.

Group of orthologs #46. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.aerophilum:261

A8J1U3              	100.00%		Q8ZTD9              	100.00%
Bootstrap support for A8J1U3 as seed ortholog is 99%.
Bootstrap support for Q8ZTD9 as seed ortholog is 100%.

Group of orthologs #47. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:260

A8ISC5              	100.00%		Q8ZXI3              	100.00%
Bootstrap support for A8ISC5 as seed ortholog is 87%.
Bootstrap support for Q8ZXI3 as seed ortholog is 100%.

Group of orthologs #48. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.aerophilum:257

A8HPT2              	100.00%		Q8ZVM0              	100.00%
Bootstrap support for A8HPT2 as seed ortholog is 100%.
Bootstrap support for Q8ZVM0 as seed ortholog is 100%.

Group of orthologs #49. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.aerophilum:196

A8HPT8              	100.00%		Q8ZUK1              	100.00%
Bootstrap support for A8HPT8 as seed ortholog is 100%.
Bootstrap support for Q8ZUK1 as seed ortholog is 100%.

Group of orthologs #50. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.aerophilum:256

A8J5U1              	100.00%		Q8ZTU5              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for Q8ZTU5 as seed ortholog is 100%.

Group of orthologs #51. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.aerophilum:253

A8IBN3              	100.00%		Q8ZVQ9              	100.00%
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ9 as seed ortholog is 100%.

Group of orthologs #52. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.aerophilum:144

Q6Q242              	100.00%		Q8ZYR9              	100.00%
A8JDI7              	24.64%		
Bootstrap support for Q6Q242 as seed ortholog is 100%.
Bootstrap support for Q8ZYR9 as seed ortholog is 99%.

Group of orthologs #53. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.aerophilum:249

A8JGF7              	100.00%		Q8ZUR9              	100.00%
A8I2V9              	25.19%		
Bootstrap support for A8JGF7 as seed ortholog is 100%.
Bootstrap support for Q8ZUR9 as seed ortholog is 100%.

Group of orthologs #54. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.aerophilum:248

A8IED9              	100.00%		Q8ZYB3              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for Q8ZYB3 as seed ortholog is 100%.

Group of orthologs #55. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.aerophilum:247

A8HVY8              	100.00%		Q8ZVB1              	100.00%
Bootstrap support for A8HVY8 as seed ortholog is 99%.
Bootstrap support for Q8ZVB1 as seed ortholog is 100%.

Group of orthologs #56. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.aerophilum:82

A8J2S0              	100.00%		Q8ZWP2              	100.00%
Bootstrap support for A8J2S0 as seed ortholog is 99%.
Bootstrap support for Q8ZWP2 as seed ortholog is 98%.

Group of orthologs #57. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.aerophilum:133

A8HPJ0              	100.00%		Q8ZVV2              	100.00%
Bootstrap support for A8HPJ0 as seed ortholog is 100%.
Bootstrap support for Q8ZVV2 as seed ortholog is 96%.

Group of orthologs #58. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.aerophilum:244

A8IAK9              	100.00%		Q8ZYH7              	100.00%
Bootstrap support for A8IAK9 as seed ortholog is 100%.
Bootstrap support for Q8ZYH7 as seed ortholog is 100%.

Group of orthologs #59. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.aerophilum:243

A8IWF9              	100.00%		Q8ZXA8              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for Q8ZXA8 as seed ortholog is 100%.

Group of orthologs #60. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.aerophilum:194

A8J6J6              	100.00%		Q8ZSN8              	100.00%
Bootstrap support for A8J6J6 as seed ortholog is 100%.
Bootstrap support for Q8ZSN8 as seed ortholog is 100%.

Group of orthologs #61. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.aerophilum:168

A8JBC7              	100.00%		Q8ZUR7              	100.00%
Bootstrap support for A8JBC7 as seed ortholog is 86%.
Bootstrap support for Q8ZUR7 as seed ortholog is 99%.

Group of orthologs #62. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.aerophilum:240

A8J825              	100.00%		Q8ZSY7              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for Q8ZSY7 as seed ortholog is 100%.

Group of orthologs #63. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.aerophilum:239

A8IWJ5              	100.00%		Q8ZU29              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 99%.
Bootstrap support for Q8ZU29 as seed ortholog is 100%.

Group of orthologs #64. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.aerophilum:238

A8IQ05              	100.00%		Q8ZVF3              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for Q8ZVF3 as seed ortholog is 100%.

Group of orthologs #65. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.aerophilum:238

A8J4W1              	100.00%		Q8ZWG5              	100.00%
Bootstrap support for A8J4W1 as seed ortholog is 89%.
Bootstrap support for Q8ZWG5 as seed ortholog is 100%.

Group of orthologs #66. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.aerophilum:238

A8J933              	100.00%		Q8ZV07              	100.00%
Bootstrap support for A8J933 as seed ortholog is 95%.
Bootstrap support for Q8ZV07 as seed ortholog is 100%.

Group of orthologs #67. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.aerophilum:237

A8J355              	100.00%		Q8ZV75              	100.00%
Bootstrap support for A8J355 as seed ortholog is 82%.
Bootstrap support for Q8ZV75 as seed ortholog is 100%.

Group of orthologs #68. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 P.aerophilum:236

A8HMQ1              	100.00%		Q8ZX30              	100.00%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for Q8ZX30 as seed ortholog is 100%.

Group of orthologs #69. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.aerophilum:235

A8J2Z6              	100.00%		Q8ZW90              	100.00%
Bootstrap support for A8J2Z6 as seed ortholog is 100%.
Bootstrap support for Q8ZW90 as seed ortholog is 100%.

Group of orthologs #70. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.aerophilum:164

A8J5E0              	100.00%		Q8ZYK4              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 45%.
Alternative seed ortholog is A8HYL2 (3 bits away from this cluster)
Bootstrap support for Q8ZYK4 as seed ortholog is 100%.

Group of orthologs #71. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.aerophilum:232

A8IWM1              	100.00%		Q8ZW54              	100.00%
Bootstrap support for A8IWM1 as seed ortholog is 56%.
Alternative seed ortholog is A8IRW5 (5 bits away from this cluster)
Bootstrap support for Q8ZW54 as seed ortholog is 100%.

Group of orthologs #72. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.aerophilum:232

A8JDZ0              	100.00%		Q8ZU26              	100.00%
Bootstrap support for A8JDZ0 as seed ortholog is 100%.
Bootstrap support for Q8ZU26 as seed ortholog is 100%.

Group of orthologs #73. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.aerophilum:151

A8JCG5              	100.00%		Q8ZWS2              	100.00%
Bootstrap support for A8JCG5 as seed ortholog is 63%.
Alternative seed ortholog is A8HYL2 (10 bits away from this cluster)
Bootstrap support for Q8ZWS2 as seed ortholog is 100%.

Group of orthologs #74. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.aerophilum:231

A8J2Z9              	100.00%		Q8ZYN2              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 99%.
Bootstrap support for Q8ZYN2 as seed ortholog is 100%.

Group of orthologs #75. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 P.aerophilum:229

A8J462              	100.00%		Q8ZSV6              	100.00%
A8J0R6              	13.38%		
Bootstrap support for A8J462 as seed ortholog is 100%.
Bootstrap support for Q8ZSV6 as seed ortholog is 100%.

Group of orthologs #76. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.aerophilum:223

A8I9R1              	100.00%		Q8ZVF0              	100.00%
Bootstrap support for A8I9R1 as seed ortholog is 83%.
Bootstrap support for Q8ZVF0 as seed ortholog is 100%.

Group of orthologs #77. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.aerophilum:222

A8IKB7              	100.00%		Q8ZT69              	100.00%
Bootstrap support for A8IKB7 as seed ortholog is 100%.
Bootstrap support for Q8ZT69 as seed ortholog is 100%.

Group of orthologs #78. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.aerophilum:222

A8ILJ9              	100.00%		Q8ZW40              	100.00%
Bootstrap support for A8ILJ9 as seed ortholog is 100%.
Bootstrap support for Q8ZW40 as seed ortholog is 100%.

Group of orthologs #79. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.aerophilum:222

A8JE40              	100.00%		Q8ZWF4              	100.00%
Bootstrap support for A8JE40 as seed ortholog is 99%.
Bootstrap support for Q8ZWF4 as seed ortholog is 100%.

Group of orthologs #80. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.aerophilum:219

A8JG03              	100.00%		Q8ZW41              	100.00%
Bootstrap support for A8JG03 as seed ortholog is 100%.
Bootstrap support for Q8ZW41 as seed ortholog is 100%.

Group of orthologs #81. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.aerophilum:215

A8IMN5              	100.00%		Q8ZY49              	100.00%
Bootstrap support for A8IMN5 as seed ortholog is 100%.
Bootstrap support for Q8ZY49 as seed ortholog is 100%.

Group of orthologs #82. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.aerophilum:100

A8IPE0              	100.00%		Q8ZV35              	100.00%
                    	       		Q8ZV22              	36.40%
Bootstrap support for A8IPE0 as seed ortholog is 99%.
Bootstrap support for Q8ZV35 as seed ortholog is 99%.

Group of orthologs #83. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.aerophilum:212

A8J5D8              	100.00%		Q8ZVE4              	100.00%
Bootstrap support for A8J5D8 as seed ortholog is 100%.
Bootstrap support for Q8ZVE4 as seed ortholog is 100%.

Group of orthologs #84. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.aerophilum:116

A8J1X8              	100.00%		Q8ZYM8              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 99%.
Bootstrap support for Q8ZYM8 as seed ortholog is 99%.

Group of orthologs #85. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.aerophilum:210

A8IBN0              	100.00%		Q8ZV45              	100.00%
Bootstrap support for A8IBN0 as seed ortholog is 100%.
Bootstrap support for Q8ZV45 as seed ortholog is 100%.

Group of orthologs #86. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.aerophilum:207

A8J2X6              	100.00%		Q8ZUA0              	100.00%
Bootstrap support for A8J2X6 as seed ortholog is 100%.
Bootstrap support for Q8ZUA0 as seed ortholog is 100%.

Group of orthologs #87. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.aerophilum:207

A8JH98              	100.00%		Q8ZYE7              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for Q8ZYE7 as seed ortholog is 100%.

Group of orthologs #88. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.aerophilum:206

A8IVK1              	100.00%		Q8ZYF5              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 99%.
Bootstrap support for Q8ZYF5 as seed ortholog is 100%.

Group of orthologs #89. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.aerophilum:205

A8I8E3              	100.00%		Q8ZVL9              	100.00%
Bootstrap support for A8I8E3 as seed ortholog is 100%.
Bootstrap support for Q8ZVL9 as seed ortholog is 100%.

Group of orthologs #90. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.aerophilum:205

A8J168              	100.00%		Q8ZX61              	100.00%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for Q8ZX61 as seed ortholog is 100%.

Group of orthologs #91. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.aerophilum:202

A8JDR3              	100.00%		Q8ZTP7              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for Q8ZTP7 as seed ortholog is 100%.

Group of orthologs #92. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.aerophilum:201

A8ID84              	100.00%		Q8ZW52              	100.00%
Bootstrap support for A8ID84 as seed ortholog is 100%.
Bootstrap support for Q8ZW52 as seed ortholog is 100%.

Group of orthologs #93. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.aerophilum:79

A8JGK6              	100.00%		Q8ZYD9              	100.00%
Bootstrap support for A8JGK6 as seed ortholog is 99%.
Bootstrap support for Q8ZYD9 as seed ortholog is 95%.

Group of orthologs #94. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.aerophilum:198

A8IA86              	100.00%		Q8ZTI9              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for Q8ZTI9 as seed ortholog is 100%.

Group of orthologs #95. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.aerophilum:195

A8HVM9              	100.00%		Q8ZUI5              	100.00%
                    	       		Q8ZUB1              	9.49%
Bootstrap support for A8HVM9 as seed ortholog is 100%.
Bootstrap support for Q8ZUI5 as seed ortholog is 100%.

Group of orthologs #96. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.aerophilum:19

A8J0R7              	100.00%		Q8ZWR8              	100.00%
A8J6V1              	23.98%		
Bootstrap support for A8J0R7 as seed ortholog is 97%.
Bootstrap support for Q8ZWR8 as seed ortholog is 68%.
Alternative seed ortholog is Q8ZW34 (19 bits away from this cluster)

Group of orthologs #97. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.aerophilum:35

Q6QJE1              	100.00%		Q8ZXL2              	100.00%
                    	       		Q8ZZV5              	13.19%
                    	       		Q8ZXE6              	12.20%
Bootstrap support for Q6QJE1 as seed ortholog is 99%.
Bootstrap support for Q8ZXL2 as seed ortholog is 86%.

Group of orthologs #98. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.aerophilum:193

A8I2Y4              	100.00%		Q8ZWZ1              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for Q8ZWZ1 as seed ortholog is 100%.

Group of orthologs #99. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.aerophilum:193

A8IEL6              	100.00%		Q8ZT51              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for Q8ZT51 as seed ortholog is 100%.

Group of orthologs #100. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.aerophilum:192

A8J5K4              	100.00%		Q8ZTI8              	100.00%
A8IID0              	22.01%		
Bootstrap support for A8J5K4 as seed ortholog is 99%.
Bootstrap support for Q8ZTI8 as seed ortholog is 100%.

Group of orthologs #101. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.aerophilum:192

A8J4P1              	100.00%		Q8ZUW2              	100.00%
Bootstrap support for A8J4P1 as seed ortholog is 93%.
Bootstrap support for Q8ZUW2 as seed ortholog is 100%.

Group of orthologs #102. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.aerophilum:191

A8J463              	100.00%		Q8ZW80              	100.00%
Bootstrap support for A8J463 as seed ortholog is 100%.
Bootstrap support for Q8ZW80 as seed ortholog is 100%.

Group of orthologs #103. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.aerophilum:190

A8J2I5              	100.00%		Q8ZYK5              	100.00%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for Q8ZYK5 as seed ortholog is 100%.

Group of orthologs #104. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.aerophilum:189

A8IAS5              	100.00%		Q8ZXH3              	100.00%
Bootstrap support for A8IAS5 as seed ortholog is 100%.
Bootstrap support for Q8ZXH3 as seed ortholog is 100%.

Group of orthologs #105. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.aerophilum:187

A8HQI6              	100.00%		Q8ZVM1              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 53%.
Alternative seed ortholog is A8ID63 (4 bits away from this cluster)
Bootstrap support for Q8ZVM1 as seed ortholog is 100%.

Group of orthologs #106. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.aerophilum:187

A8JH01              	100.00%		Q8ZW10              	100.00%
Bootstrap support for A8JH01 as seed ortholog is 100%.
Bootstrap support for Q8ZW10 as seed ortholog is 100%.

Group of orthologs #107. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.aerophilum:187

Q6V9A8              	100.00%		Q8ZWW9              	100.00%
Bootstrap support for Q6V9A8 as seed ortholog is 100%.
Bootstrap support for Q8ZWW9 as seed ortholog is 100%.

Group of orthologs #108. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.aerophilum:186

A8J1V5              	100.00%		Q8ZUR6              	100.00%
A8HYH4              	26.80%		
Bootstrap support for A8J1V5 as seed ortholog is 96%.
Bootstrap support for Q8ZUR6 as seed ortholog is 100%.

Group of orthologs #109. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.aerophilum:185

A8JC04              	100.00%		Q8ZWK6              	100.00%
A8JFT4              	18.64%		
Bootstrap support for A8JC04 as seed ortholog is 100%.
Bootstrap support for Q8ZWK6 as seed ortholog is 100%.

Group of orthologs #110. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.aerophilum:185

A8ITU7              	100.00%		Q8ZTC7              	100.00%
Bootstrap support for A8ITU7 as seed ortholog is 92%.
Bootstrap support for Q8ZTC7 as seed ortholog is 100%.

Group of orthologs #111. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.aerophilum:185

A8J6A7              	100.00%		Q8ZUW4              	100.00%
Bootstrap support for A8J6A7 as seed ortholog is 100%.
Bootstrap support for Q8ZUW4 as seed ortholog is 100%.

Group of orthologs #112. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.aerophilum:107

A8ITJ3              	100.00%		Q8ZWF8              	100.00%
Bootstrap support for A8ITJ3 as seed ortholog is 99%.
Bootstrap support for Q8ZWF8 as seed ortholog is 99%.

Group of orthologs #113. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.aerophilum:180

A8IXQ5              	100.00%		Q8ZWM5              	100.00%
Bootstrap support for A8IXQ5 as seed ortholog is 66%.
Alternative seed ortholog is A8J2R7 (14 bits away from this cluster)
Bootstrap support for Q8ZWM5 as seed ortholog is 100%.

Group of orthologs #114. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.aerophilum:179

A8J0I0              	100.00%		Q8ZW51              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for Q8ZW51 as seed ortholog is 100%.

Group of orthologs #115. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.aerophilum:66

A8HXS9              	100.00%		Q8ZW35              	100.00%
                    	       		Q8ZW39              	19.54%
Bootstrap support for A8HXS9 as seed ortholog is 99%.
Bootstrap support for Q8ZW35 as seed ortholog is 91%.

Group of orthologs #116. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.aerophilum:47

A8J2Z8              	100.00%		Q8ZYT7              	100.00%
Bootstrap support for A8J2Z8 as seed ortholog is 100%.
Bootstrap support for Q8ZYT7 as seed ortholog is 86%.

Group of orthologs #117. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.aerophilum:177

A8JDN9              	100.00%		Q8ZYG3              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 76%.
Bootstrap support for Q8ZYG3 as seed ortholog is 100%.

Group of orthologs #118. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.aerophilum:176

A8J4R9              	100.00%		Q8ZYF9              	100.00%
Q8W4V3              	52.28%		
A8JFK4              	47.59%		
Bootstrap support for A8J4R9 as seed ortholog is 100%.
Bootstrap support for Q8ZYF9 as seed ortholog is 100%.

Group of orthologs #119. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.aerophilum:176

A8HUR6              	100.00%		Q8ZUZ3              	100.00%
Bootstrap support for A8HUR6 as seed ortholog is 100%.
Bootstrap support for Q8ZUZ3 as seed ortholog is 100%.

Group of orthologs #120. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.aerophilum:176

A8IMY5              	100.00%		Q8ZV46              	100.00%
Bootstrap support for A8IMY5 as seed ortholog is 100%.
Bootstrap support for Q8ZV46 as seed ortholog is 100%.

Group of orthologs #121. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.aerophilum:172

A8JES3              	100.00%		Q8ZW06              	100.00%
Bootstrap support for A8JES3 as seed ortholog is 100%.
Bootstrap support for Q8ZW06 as seed ortholog is 100%.

Group of orthologs #122. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.aerophilum:171

A8J275              	100.00%		Q8ZVM9              	100.00%
Bootstrap support for A8J275 as seed ortholog is 99%.
Bootstrap support for Q8ZVM9 as seed ortholog is 100%.

Group of orthologs #123. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.aerophilum:103

A8HNQ7              	100.00%		Q8ZWL7              	100.00%
A8JFV6              	16.84%		Q8ZUK0              	9.87%
A8I208              	12.87%		
Bootstrap support for A8HNQ7 as seed ortholog is 97%.
Bootstrap support for Q8ZWL7 as seed ortholog is 99%.

Group of orthologs #124. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.aerophilum:92

A8J6E9              	100.00%		Q8ZZG9              	100.00%
A8HNY7              	53.25%		
Bootstrap support for A8J6E9 as seed ortholog is 99%.
Bootstrap support for Q8ZZG9 as seed ortholog is 99%.

Group of orthologs #125. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.aerophilum:166

A8HME4              	100.00%		Q8ZXN9              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for Q8ZXN9 as seed ortholog is 100%.

Group of orthologs #126. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:166

A8I9B0              	100.00%		Q8ZV32              	100.00%
Bootstrap support for A8I9B0 as seed ortholog is 97%.
Bootstrap support for Q8ZV32 as seed ortholog is 100%.

Group of orthologs #127. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.aerophilum:165

A8IIN4              	100.00%		Q8ZX10              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 72%.
Alternative seed ortholog is A8JGG5 (20 bits away from this cluster)
Bootstrap support for Q8ZX10 as seed ortholog is 100%.

Group of orthologs #128. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.aerophilum:39

A8J3F9              	100.00%		Q8ZSW5              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 98%.
Bootstrap support for Q8ZSW5 as seed ortholog is 85%.

Group of orthologs #129. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.aerophilum:163

A8J2R6              	100.00%		Q8ZU57              	100.00%
Bootstrap support for A8J2R6 as seed ortholog is 73%.
Alternative seed ortholog is A8JA29 (32 bits away from this cluster)
Bootstrap support for Q8ZU57 as seed ortholog is 100%.

Group of orthologs #130. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.aerophilum:50

A8J0E9              	100.00%		Q8ZYW2              	100.00%
Bootstrap support for A8J0E9 as seed ortholog is 100%.
Bootstrap support for Q8ZYW2 as seed ortholog is 96%.

Group of orthologs #131. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.aerophilum:99

A8JF71              	100.00%		Q8ZVG4              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for Q8ZVG4 as seed ortholog is 99%.

Group of orthologs #132. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.aerophilum:161

A8JF79              	100.00%		Q8ZYG9              	100.00%
Bootstrap support for A8JF79 as seed ortholog is 100%.
Bootstrap support for Q8ZYG9 as seed ortholog is 100%.

Group of orthologs #133. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.aerophilum:160

A8IVR6              	100.00%		Q8ZYE0              	100.00%
A8J104              	24.61%		
A8J214              	20.27%		
Bootstrap support for A8IVR6 as seed ortholog is 100%.
Bootstrap support for Q8ZYE0 as seed ortholog is 100%.

Group of orthologs #134. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.aerophilum:160

A8J3B2              	100.00%		Q8ZUR1              	100.00%
Bootstrap support for A8J3B2 as seed ortholog is 100%.
Bootstrap support for Q8ZUR1 as seed ortholog is 100%.

Group of orthologs #135. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.aerophilum:160

A8J1S8              	100.00%		Q8ZZK4              	100.00%
Bootstrap support for A8J1S8 as seed ortholog is 100%.
Bootstrap support for Q8ZZK4 as seed ortholog is 100%.

Group of orthologs #136. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.aerophilum:158

A8HQ86              	100.00%		Q8ZY90              	100.00%
A8JGT9              	15.49%		
Bootstrap support for A8HQ86 as seed ortholog is 68%.
Alternative seed ortholog is A8HZ92 (19 bits away from this cluster)
Bootstrap support for Q8ZY90 as seed ortholog is 100%.

Group of orthologs #137. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.aerophilum:158

A8HYM8              	100.00%		Q8ZXM4              	100.00%
Bootstrap support for A8HYM8 as seed ortholog is 92%.
Bootstrap support for Q8ZXM4 as seed ortholog is 100%.

Group of orthologs #138. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.aerophilum:157

A8HPR5              	100.00%		Q8ZT09              	100.00%
A8J484              	63.50%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for Q8ZT09 as seed ortholog is 100%.

Group of orthologs #139. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.aerophilum:156

A8HP28              	100.00%		Q8ZV47              	100.00%
Bootstrap support for A8HP28 as seed ortholog is 100%.
Bootstrap support for Q8ZV47 as seed ortholog is 100%.

Group of orthologs #140. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.aerophilum:156

A8HZZ1              	100.00%		Q8ZUA2              	100.00%
Bootstrap support for A8HZZ1 as seed ortholog is 98%.
Bootstrap support for Q8ZUA2 as seed ortholog is 100%.

Group of orthologs #141. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.aerophilum:156

A8IJQ4              	100.00%		Q8ZYQ4              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ4 as seed ortholog is 100%.

Group of orthologs #142. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.aerophilum:154

A8IH85              	100.00%		Q8ZTY7              	100.00%
A8J119              	12.35%		
Bootstrap support for A8IH85 as seed ortholog is 100%.
Bootstrap support for Q8ZTY7 as seed ortholog is 100%.

Group of orthologs #143. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.aerophilum:154

A8J5M2              	100.00%		Q8ZT00              	100.00%
                    	       		Q8ZU41              	17.28%
Bootstrap support for A8J5M2 as seed ortholog is 84%.
Bootstrap support for Q8ZT00 as seed ortholog is 100%.

Group of orthologs #144. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.aerophilum:154

A8IYT7              	100.00%		Q8ZUR8              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for Q8ZUR8 as seed ortholog is 100%.

Group of orthologs #145. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.aerophilum:153

A8JAX1              	100.00%		O93724              	100.00%
A8I2E0              	9.00%		
Bootstrap support for A8JAX1 as seed ortholog is 90%.
Bootstrap support for O93724 as seed ortholog is 100%.

Group of orthologs #146. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.aerophilum:151

A8J244              	100.00%		Q8ZWB6              	100.00%
Bootstrap support for A8J244 as seed ortholog is 93%.
Bootstrap support for Q8ZWB6 as seed ortholog is 100%.

Group of orthologs #147. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.aerophilum:151

A8JFB1              	100.00%		Q8ZYW7              	100.00%
Bootstrap support for A8JFB1 as seed ortholog is 100%.
Bootstrap support for Q8ZYW7 as seed ortholog is 100%.

Group of orthologs #148. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.aerophilum:150

A8IJX8              	100.00%		Q8ZVR0              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for Q8ZVR0 as seed ortholog is 100%.

Group of orthologs #149. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.aerophilum:149

A8HX04              	100.00%		Q8ZYL9              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for Q8ZYL9 as seed ortholog is 100%.

Group of orthologs #150. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.aerophilum:148

A8IFZ9              	100.00%		Q8ZV44              	100.00%
                    	       		Q8ZZH7              	33.93%
Bootstrap support for A8IFZ9 as seed ortholog is 100%.
Bootstrap support for Q8ZV44 as seed ortholog is 100%.

Group of orthologs #151. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.aerophilum:148

Q8VZZ5              	100.00%		Q8ZU81              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for Q8ZU81 as seed ortholog is 100%.

Group of orthologs #152. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.aerophilum:36

A8JFY9              	100.00%		Q8ZT41              	100.00%
Bootstrap support for A8JFY9 as seed ortholog is 100%.
Bootstrap support for Q8ZT41 as seed ortholog is 83%.

Group of orthologs #153. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.aerophilum:147

A8JF35              	100.00%		Q8ZU33              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for Q8ZU33 as seed ortholog is 100%.

Group of orthologs #154. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.aerophilum:145

A8J9P0              	100.00%		Q8ZU65              	100.00%
A8JFJ4              	13.95%		Q8ZXA1              	6.92%
Bootstrap support for A8J9P0 as seed ortholog is 73%.
Alternative seed ortholog is A8JEQ2 (15 bits away from this cluster)
Bootstrap support for Q8ZU65 as seed ortholog is 100%.

Group of orthologs #155. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.aerophilum:144

A8ISG1              	100.00%		Q8ZYL5              	100.00%
Bootstrap support for A8ISG1 as seed ortholog is 100%.
Bootstrap support for Q8ZYL5 as seed ortholog is 100%.

Group of orthologs #156. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.aerophilum:143

A8IY20              	100.00%		Q8ZU64              	100.00%
Bootstrap support for A8IY20 as seed ortholog is 82%.
Bootstrap support for Q8ZU64 as seed ortholog is 100%.

Group of orthologs #157. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.aerophilum:143

A8IUI9              	100.00%		Q8ZZN5              	100.00%
Bootstrap support for A8IUI9 as seed ortholog is 100%.
Bootstrap support for Q8ZZN5 as seed ortholog is 100%.

Group of orthologs #158. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:84

Q84X75              	100.00%		Q8ZUD8              	100.00%
Bootstrap support for Q84X75 as seed ortholog is 97%.
Bootstrap support for Q8ZUD8 as seed ortholog is 99%.

Group of orthologs #159. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.aerophilum:141

A8IJJ8              	100.00%		Q8ZZJ2              	100.00%
Bootstrap support for A8IJJ8 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ2 as seed ortholog is 100%.

Group of orthologs #160. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.aerophilum:141

A8J768              	100.00%		Q8ZTM9              	100.00%
Bootstrap support for A8J768 as seed ortholog is 99%.
Bootstrap support for Q8ZTM9 as seed ortholog is 100%.

Group of orthologs #161. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.aerophilum:140

A8IGY1              	100.00%		Q8ZT11              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for Q8ZT11 as seed ortholog is 100%.

Group of orthologs #162. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.aerophilum:140

A8IW34              	100.00%		Q8ZY26              	100.00%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for Q8ZY26 as seed ortholog is 100%.

Group of orthologs #163. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.aerophilum:139

A8IY70              	100.00%		Q8ZW74              	100.00%
                    	       		Q8ZV33              	13.76%
Bootstrap support for A8IY70 as seed ortholog is 100%.
Bootstrap support for Q8ZW74 as seed ortholog is 100%.

Group of orthologs #164. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.aerophilum:139

A8J7D7              	100.00%		Q8ZU23              	100.00%
A8I2K8              	6.39%		
Bootstrap support for A8J7D7 as seed ortholog is 85%.
Bootstrap support for Q8ZU23 as seed ortholog is 100%.

Group of orthologs #165. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.aerophilum:139

A8J9E6              	100.00%		Q8ZVU8              	100.00%
Bootstrap support for A8J9E6 as seed ortholog is 84%.
Bootstrap support for Q8ZVU8 as seed ortholog is 100%.

Group of orthologs #166. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.aerophilum:138

A8JH65              	100.00%		Q8ZZK1              	100.00%
A8IFV5              	21.51%		
A8IQS8              	18.30%		
Bootstrap support for A8JH65 as seed ortholog is 100%.
Bootstrap support for Q8ZZK1 as seed ortholog is 100%.

Group of orthologs #167. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.aerophilum:136

A8HZX4              	100.00%		Q8ZT27              	100.00%
                    	       		Q8ZT28              	17.39%
                    	       		Q8ZTX3              	5.25%
Bootstrap support for A8HZX4 as seed ortholog is 100%.
Bootstrap support for Q8ZT27 as seed ortholog is 100%.

Group of orthologs #168. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.aerophilum:136

A8ITK3              	100.00%		Q8ZYI4              	100.00%
A8IVS6              	5.40%		
Bootstrap support for A8ITK3 as seed ortholog is 71%.
Alternative seed ortholog is A8JBB8 (14 bits away from this cluster)
Bootstrap support for Q8ZYI4 as seed ortholog is 100%.

Group of orthologs #169. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.aerophilum:65

A8J2N5              	100.00%		Q8ZWY9              	100.00%
Bootstrap support for A8J2N5 as seed ortholog is 100%.
Bootstrap support for Q8ZWY9 as seed ortholog is 96%.

Group of orthologs #170. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.aerophilum:136

A8JFT1              	100.00%		Q8ZY71              	100.00%
Bootstrap support for A8JFT1 as seed ortholog is 100%.
Bootstrap support for Q8ZY71 as seed ortholog is 100%.

Group of orthologs #171. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.aerophilum:71

A8JDL8              	100.00%		Q8ZYG0              	100.00%
Bootstrap support for A8JDL8 as seed ortholog is 98%.
Bootstrap support for Q8ZYG0 as seed ortholog is 99%.

Group of orthologs #172. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.aerophilum:133

A8IB25              	100.00%		Q8ZYE2              	100.00%
Bootstrap support for A8IB25 as seed ortholog is 100%.
Bootstrap support for Q8ZYE2 as seed ortholog is 100%.

Group of orthologs #173. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.aerophilum:133

Q6V9B0              	100.00%		Q8ZU66              	100.00%
Bootstrap support for Q6V9B0 as seed ortholog is 100%.
Bootstrap support for Q8ZU66 as seed ortholog is 100%.

Group of orthologs #174. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.aerophilum:132

A8HQ81              	100.00%		Q8ZSU7              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 99%.
Bootstrap support for Q8ZSU7 as seed ortholog is 100%.

Group of orthologs #175. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 P.aerophilum:132

A8HQU6              	100.00%		Q8ZVJ5              	100.00%
Bootstrap support for A8HQU6 as seed ortholog is 73%.
Alternative seed ortholog is A8J0Z1 (17 bits away from this cluster)
Bootstrap support for Q8ZVJ5 as seed ortholog is 100%.

Group of orthologs #176. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.aerophilum:132

A8IA89              	100.00%		Q8ZY17              	100.00%
Bootstrap support for A8IA89 as seed ortholog is 100%.
Bootstrap support for Q8ZY17 as seed ortholog is 100%.

Group of orthologs #177. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.aerophilum:131

A8J493              	100.00%		Q8ZWL4              	100.00%
Bootstrap support for A8J493 as seed ortholog is 99%.
Bootstrap support for Q8ZWL4 as seed ortholog is 100%.

Group of orthologs #178. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.aerophilum:129

A8HP70              	100.00%		Q8ZUR4              	100.00%
Bootstrap support for A8HP70 as seed ortholog is 88%.
Bootstrap support for Q8ZUR4 as seed ortholog is 100%.

Group of orthologs #179. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.aerophilum:129

A8I9M1              	100.00%		Q8ZVE1              	100.00%
Bootstrap support for A8I9M1 as seed ortholog is 56%.
Alternative seed ortholog is A8J288 (11 bits away from this cluster)
Bootstrap support for Q8ZVE1 as seed ortholog is 100%.

Group of orthologs #180. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.aerophilum:129

A8IE44              	100.00%		Q8ZVN0              	100.00%
Bootstrap support for A8IE44 as seed ortholog is 82%.
Bootstrap support for Q8ZVN0 as seed ortholog is 100%.

Group of orthologs #181. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.aerophilum:129

A8IZK3              	100.00%		Q8ZSV4              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for Q8ZSV4 as seed ortholog is 100%.

Group of orthologs #182. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.aerophilum:129

A8JCC5              	100.00%		Q8ZU54              	100.00%
Bootstrap support for A8JCC5 as seed ortholog is 85%.
Bootstrap support for Q8ZU54 as seed ortholog is 100%.

Group of orthologs #183. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.aerophilum:58

A8J942              	100.00%		Q8ZXR3              	100.00%
A8JA41              	27.25%		
Bootstrap support for A8J942 as seed ortholog is 66%.
Alternative seed ortholog is A8IS79 (10 bits away from this cluster)
Bootstrap support for Q8ZXR3 as seed ortholog is 96%.

Group of orthologs #184. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.aerophilum:38

A8IWD2              	100.00%		Q8ZVW5              	100.00%
A8IS20              	5.24%		
Bootstrap support for A8IWD2 as seed ortholog is 74%.
Alternative seed ortholog is A8HN44 (22 bits away from this cluster)
Bootstrap support for Q8ZVW5 as seed ortholog is 89%.

Group of orthologs #185. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.aerophilum:71

A8J7D9              	100.00%		Q8ZYP5              	100.00%
Bootstrap support for A8J7D9 as seed ortholog is 100%.
Bootstrap support for Q8ZYP5 as seed ortholog is 98%.

Group of orthologs #186. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.aerophilum:49

A8IX47              	100.00%		Q8ZW83              	100.00%
A8IX35              	74.55%		Q8ZVD9              	6.98%
A8IUI1              	16.20%		
Bootstrap support for A8IX47 as seed ortholog is 76%.
Bootstrap support for Q8ZW83 as seed ortholog is 89%.

Group of orthologs #187. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.aerophilum:124

A8HMQ7              	100.00%		Q8ZTJ4              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ4 as seed ortholog is 100%.

Group of orthologs #188. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.aerophilum:124

A8J387              	100.00%		Q8ZTA8              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for Q8ZTA8 as seed ortholog is 100%.

Group of orthologs #189. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.aerophilum:124

A8JFD5              	100.00%		Q8ZXN6              	100.00%
Bootstrap support for A8JFD5 as seed ortholog is 94%.
Bootstrap support for Q8ZXN6 as seed ortholog is 100%.

Group of orthologs #190. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.aerophilum:123

A8JBH9              	100.00%		Q8ZTH7              	100.00%
A8J0B6              	19.77%		Q8ZYV2              	28.31%
Bootstrap support for A8JBH9 as seed ortholog is 77%.
Bootstrap support for Q8ZTH7 as seed ortholog is 100%.

Group of orthologs #191. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.aerophilum:123

A2PZC1              	100.00%		Q8ZYY6              	100.00%
A8J4Y6              	100.00%		
Bootstrap support for A2PZC1 as seed ortholog is 100%.
Bootstrap support for A8J4Y6 as seed ortholog is 100%.
Bootstrap support for Q8ZYY6 as seed ortholog is 100%.

Group of orthologs #192. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.aerophilum:123

A8IMP6              	100.00%		Q8ZTD3              	100.00%
Bootstrap support for A8IMP6 as seed ortholog is 100%.
Bootstrap support for Q8ZTD3 as seed ortholog is 100%.

Group of orthologs #193. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.aerophilum:123

A8JE07              	100.00%		Q8ZVW0              	100.00%
Bootstrap support for A8JE07 as seed ortholog is 100%.
Bootstrap support for Q8ZVW0 as seed ortholog is 100%.

Group of orthologs #194. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.aerophilum:122

A8HYH7              	100.00%		Q8ZWS0              	100.00%
A8JCS4              	39.40%		
Bootstrap support for A8HYH7 as seed ortholog is 100%.
Bootstrap support for Q8ZWS0 as seed ortholog is 100%.

Group of orthologs #195. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.aerophilum:122

A8I6R4              	100.00%		Q8ZZK0              	100.00%
Bootstrap support for A8I6R4 as seed ortholog is 100%.
Bootstrap support for Q8ZZK0 as seed ortholog is 100%.

Group of orthologs #196. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.aerophilum:122

A8JC76              	100.00%		Q8ZY98              	100.00%
Bootstrap support for A8JC76 as seed ortholog is 100%.
Bootstrap support for Q8ZY98 as seed ortholog is 100%.

Group of orthologs #197. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.aerophilum:121

A8HPS2              	100.00%		Q8ZW82              	100.00%
Bootstrap support for A8HPS2 as seed ortholog is 55%.
Alternative seed ortholog is A8J1H6 (5 bits away from this cluster)
Bootstrap support for Q8ZW82 as seed ortholog is 100%.

Group of orthologs #198. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.aerophilum:121

A8IRQ1              	100.00%		Q8ZXY8              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for Q8ZXY8 as seed ortholog is 100%.

Group of orthologs #199. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.aerophilum:121

A8IZ93              	100.00%		Q8ZU24              	100.00%
Bootstrap support for A8IZ93 as seed ortholog is 100%.
Bootstrap support for Q8ZU24 as seed ortholog is 100%.

Group of orthologs #200. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.aerophilum:121

A8J9W0              	100.00%		Q8ZTR0              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 97%.
Bootstrap support for Q8ZTR0 as seed ortholog is 100%.

Group of orthologs #201. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.aerophilum:37

A8JHU6              	100.00%		Q8ZXZ8              	100.00%
Bootstrap support for A8JHU6 as seed ortholog is 52%.
Alternative seed ortholog is A8HRQ4 (3 bits away from this cluster)
Bootstrap support for Q8ZXZ8 as seed ortholog is 86%.

Group of orthologs #202. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.aerophilum:118

A8HPY0              	100.00%		Q8ZWP3              	100.00%
A8HWC2              	13.22%		
A8IUZ4              	11.46%		
A8IUW1              	10.72%		
A8HYN3              	10.25%		
A8IUW2              	10.05%		
Bootstrap support for A8HPY0 as seed ortholog is 100%.
Bootstrap support for Q8ZWP3 as seed ortholog is 100%.

Group of orthologs #203. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.aerophilum:118

A8HP55              	100.00%		Q8ZVV7              	100.00%
Bootstrap support for A8HP55 as seed ortholog is 100%.
Bootstrap support for Q8ZVV7 as seed ortholog is 100%.

Group of orthologs #204. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.aerophilum:118

A8I982              	100.00%		Q8ZWD8              	100.00%
Bootstrap support for A8I982 as seed ortholog is 100%.
Bootstrap support for Q8ZWD8 as seed ortholog is 100%.

Group of orthologs #205. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.aerophilum:118

A8IF73              	100.00%		Q8ZUE9              	100.00%
Bootstrap support for A8IF73 as seed ortholog is 100%.
Bootstrap support for Q8ZUE9 as seed ortholog is 100%.

Group of orthologs #206. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.aerophilum:118

A8J9T5              	100.00%		Q8ZZM5              	100.00%
Bootstrap support for A8J9T5 as seed ortholog is 100%.
Bootstrap support for Q8ZZM5 as seed ortholog is 100%.

Group of orthologs #207. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.aerophilum:117

A8I0V1              	100.00%		Q8ZUA3              	100.00%
A8J1S7              	7.13%		
Bootstrap support for A8I0V1 as seed ortholog is 100%.
Bootstrap support for Q8ZUA3 as seed ortholog is 100%.

Group of orthologs #208. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.aerophilum:24

A8HWW0              	100.00%		Q8ZTS1              	100.00%
A8JCJ9              	15.87%		Q8ZT66              	20.96%
A8HQY2              	5.05%		
Bootstrap support for A8HWW0 as seed ortholog is 91%.
Bootstrap support for Q8ZTS1 as seed ortholog is 77%.

Group of orthologs #209. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.aerophilum:116

A8HQB3              	100.00%		Q8ZUG5              	100.00%
A8I8X2              	17.38%		
Bootstrap support for A8HQB3 as seed ortholog is 100%.
Bootstrap support for Q8ZUG5 as seed ortholog is 100%.

Group of orthologs #210. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.aerophilum:116

A8J173              	100.00%		Q8ZUA4              	100.00%
Bootstrap support for A8J173 as seed ortholog is 100%.
Bootstrap support for Q8ZUA4 as seed ortholog is 100%.

Group of orthologs #211. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.aerophilum:115

A8ICL5              	100.00%		Q8ZWT5              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 92%.
Bootstrap support for Q8ZWT5 as seed ortholog is 100%.

Group of orthologs #212. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.aerophilum:115

A8J7U7              	100.00%		Q8ZST4              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for Q8ZST4 as seed ortholog is 100%.

Group of orthologs #213. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.aerophilum:114

A8JH58              	100.00%		Q8ZV43              	100.00%
A8HRV2              	23.27%		
A8IK58              	19.51%		
Bootstrap support for A8JH58 as seed ortholog is 100%.
Bootstrap support for Q8ZV43 as seed ortholog is 100%.

Group of orthologs #214. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.aerophilum:114

A8HWK6              	100.00%		Q8ZTB6              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 76%.
Bootstrap support for Q8ZTB6 as seed ortholog is 100%.

Group of orthologs #215. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.aerophilum:114

A8I826              	100.00%		Q8ZZX3              	100.00%
Bootstrap support for A8I826 as seed ortholog is 100%.
Bootstrap support for Q8ZZX3 as seed ortholog is 100%.

Group of orthologs #216. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.aerophilum:114

A8JAR5              	100.00%		Q8ZV67              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for Q8ZV67 as seed ortholog is 100%.

Group of orthologs #217. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.aerophilum:45

A8HQI9              	100.00%		Q8ZVD8              	100.00%
Bootstrap support for A8HQI9 as seed ortholog is 50%.
Alternative seed ortholog is A8JBW8 (12 bits away from this cluster)
Bootstrap support for Q8ZVD8 as seed ortholog is 82%.

Group of orthologs #218. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.aerophilum:113

A8I4F6              	100.00%		Q8ZY15              	100.00%
Bootstrap support for A8I4F6 as seed ortholog is 100%.
Bootstrap support for Q8ZY15 as seed ortholog is 100%.

Group of orthologs #219. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.aerophilum:112

A8HZM0              	100.00%		Q8ZVF1              	100.00%
Bootstrap support for A8HZM0 as seed ortholog is 96%.
Bootstrap support for Q8ZVF1 as seed ortholog is 100%.

Group of orthologs #220. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.aerophilum:112

A8J5A5              	100.00%		Q8ZVJ4              	100.00%
Bootstrap support for A8J5A5 as seed ortholog is 99%.
Bootstrap support for Q8ZVJ4 as seed ortholog is 100%.

Group of orthologs #221. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.aerophilum:112

Q9FPR7              	100.00%		Q8ZYV6              	100.00%
Bootstrap support for Q9FPR7 as seed ortholog is 100%.
Bootstrap support for Q8ZYV6 as seed ortholog is 100%.

Group of orthologs #222. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 P.aerophilum:111

A8I0S9              	100.00%		Q8ZTE2              	100.00%
Bootstrap support for A8I0S9 as seed ortholog is 36%.
Alternative seed ortholog is A8I7X6 (6 bits away from this cluster)
Bootstrap support for Q8ZTE2 as seed ortholog is 100%.

Group of orthologs #223. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.aerophilum:111

A8IM89              	100.00%		Q8ZWS3              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for Q8ZWS3 as seed ortholog is 100%.

Group of orthologs #224. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.aerophilum:110

A8HUE0              	100.00%		Q8ZTU1              	100.00%
Bootstrap support for A8HUE0 as seed ortholog is 100%.
Bootstrap support for Q8ZTU1 as seed ortholog is 100%.

Group of orthologs #225. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.aerophilum:110

A8I403              	100.00%		Q8ZTX8              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for Q8ZTX8 as seed ortholog is 100%.

Group of orthologs #226. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.aerophilum:109

A8JEL2              	100.00%		Q8ZVB5              	100.00%
A8HS63              	23.79%		
Bootstrap support for A8JEL2 as seed ortholog is 100%.
Bootstrap support for Q8ZVB5 as seed ortholog is 100%.

Group of orthologs #227. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.aerophilum:109

A8HVP2              	100.00%		Q8ZTV0              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 99%.
Bootstrap support for Q8ZTV0 as seed ortholog is 100%.

Group of orthologs #228. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.aerophilum:6

A8HVL4              	100.00%		Q8ZYJ6              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 78%.
Bootstrap support for Q8ZYJ6 as seed ortholog is 73%.
Alternative seed ortholog is Q8ZSU5 (6 bits away from this cluster)

Group of orthologs #229. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.aerophilum:108

A8JB48              	100.00%		Q8ZU06              	100.00%
Bootstrap support for A8JB48 as seed ortholog is 99%.
Bootstrap support for Q8ZU06 as seed ortholog is 100%.

Group of orthologs #230. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.aerophilum:108

A8JHX0              	100.00%		Q8ZTY0              	100.00%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for Q8ZTY0 as seed ortholog is 100%.

Group of orthologs #231. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.aerophilum:107

A8J3U1              	100.00%		Q8ZZW3              	100.00%
Bootstrap support for A8J3U1 as seed ortholog is 100%.
Bootstrap support for Q8ZZW3 as seed ortholog is 100%.

Group of orthologs #232. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.aerophilum:107

A8JH48              	100.00%		Q8ZW81              	100.00%
Bootstrap support for A8JH48 as seed ortholog is 100%.
Bootstrap support for Q8ZW81 as seed ortholog is 100%.

Group of orthologs #233. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.aerophilum:107

A8JGB0              	100.00%		Q8ZX71              	100.00%
Bootstrap support for A8JGB0 as seed ortholog is 100%.
Bootstrap support for Q8ZX71 as seed ortholog is 100%.

Group of orthologs #234. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.aerophilum:106

A8HZN7              	100.00%		Q8ZWC4              	100.00%
A8JHJ0              	15.99%		
A8I5J0              	12.71%		
A8JC79              	7.92%		
A8J8T0              	6.13%		
Bootstrap support for A8HZN7 as seed ortholog is 78%.
Bootstrap support for Q8ZWC4 as seed ortholog is 100%.

Group of orthologs #235. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.aerophilum:106

A8I5B9              	100.00%		Q8ZVQ8              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ8 as seed ortholog is 100%.

Group of orthologs #236. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.aerophilum:106

A8ILT1              	100.00%		Q8ZXW7              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 51%.
Alternative seed ortholog is A8J7Y2 (8 bits away from this cluster)
Bootstrap support for Q8ZXW7 as seed ortholog is 100%.

Group of orthologs #237. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.aerophilum:106

A8IWF5              	100.00%		Q8ZV53              	100.00%
Bootstrap support for A8IWF5 as seed ortholog is 100%.
Bootstrap support for Q8ZV53 as seed ortholog is 100%.

Group of orthologs #238. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.aerophilum:106

A8JHH1              	100.00%		Q8ZST9              	100.00%
Bootstrap support for A8JHH1 as seed ortholog is 100%.
Bootstrap support for Q8ZST9 as seed ortholog is 100%.

Group of orthologs #239. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.aerophilum:105

A8I2V3              	100.00%		Q8ZVW7              	100.00%
A8JIT5              	47.80%		
Q9FE86              	46.44%		
Bootstrap support for A8I2V3 as seed ortholog is 100%.
Bootstrap support for Q8ZVW7 as seed ortholog is 100%.

Group of orthologs #240. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.aerophilum:104

A8JBP0              	100.00%		Q8ZW26              	100.00%
A8JDN1              	58.09%		
A8IMP0              	48.38%		
A8J1A2              	45.68%		
Q9XGU3              	32.01%		
Bootstrap support for A8JBP0 as seed ortholog is 100%.
Bootstrap support for Q8ZW26 as seed ortholog is 100%.

Group of orthologs #241. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.aerophilum:104

A8JH12              	100.00%		Q8ZWY4              	100.00%
A8J9H8              	58.64%		
Bootstrap support for A8JH12 as seed ortholog is 100%.
Bootstrap support for Q8ZWY4 as seed ortholog is 100%.

Group of orthologs #242. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.aerophilum:46

A8J3X9              	100.00%		Q8ZYH6              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 96%.
Bootstrap support for Q8ZYH6 as seed ortholog is 97%.

Group of orthologs #243. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.aerophilum:103

A8HTR6              	100.00%		Q8ZXZ9              	100.00%
Bootstrap support for A8HTR6 as seed ortholog is 100%.
Bootstrap support for Q8ZXZ9 as seed ortholog is 100%.

Group of orthologs #244. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.aerophilum:103

A8IYH5              	100.00%		Q8ZZK2              	100.00%
Bootstrap support for A8IYH5 as seed ortholog is 93%.
Bootstrap support for Q8ZZK2 as seed ortholog is 100%.

Group of orthologs #245. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.aerophilum:102

A8JGF8              	100.00%		Q8ZTV1              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 97%.
Bootstrap support for Q8ZTV1 as seed ortholog is 100%.

Group of orthologs #246. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.aerophilum:101

A8I1A7              	100.00%		Q8ZYF2              	100.00%
                    	       		Q8ZST5              	15.15%
Bootstrap support for A8I1A7 as seed ortholog is 57%.
Alternative seed ortholog is A8J1X5 (5 bits away from this cluster)
Bootstrap support for Q8ZYF2 as seed ortholog is 100%.

Group of orthologs #247. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.aerophilum:101

A8IWN9              	100.00%		Q8ZYN0              	100.00%
A8IFX2              	6.53%		
Bootstrap support for A8IWN9 as seed ortholog is 95%.
Bootstrap support for Q8ZYN0 as seed ortholog is 100%.

Group of orthologs #248. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.aerophilum:101

A8J6Q1              	100.00%		Q8ZXZ6              	100.00%
A8JGT3              	14.66%		
Bootstrap support for A8J6Q1 as seed ortholog is 69%.
Alternative seed ortholog is A8JFI9 (19 bits away from this cluster)
Bootstrap support for Q8ZXZ6 as seed ortholog is 100%.

Group of orthologs #249. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.aerophilum:101

A8HQR0              	100.00%		Q8ZUQ0              	100.00%
Bootstrap support for A8HQR0 as seed ortholog is 100%.
Bootstrap support for Q8ZUQ0 as seed ortholog is 100%.

Group of orthologs #250. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.aerophilum:101

A8HSU7              	100.00%		Q8ZYQ0              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ0 as seed ortholog is 100%.

Group of orthologs #251. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.aerophilum:101

A8I9M8              	100.00%		Q8ZYL2              	100.00%
Bootstrap support for A8I9M8 as seed ortholog is 100%.
Bootstrap support for Q8ZYL2 as seed ortholog is 100%.

Group of orthologs #252. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.aerophilum:101

A8IZ72              	100.00%		Q8ZW89              	100.00%
Bootstrap support for A8IZ72 as seed ortholog is 100%.
Bootstrap support for Q8ZW89 as seed ortholog is 100%.

Group of orthologs #253. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.aerophilum:14

A8J3D3              	100.00%		Q8ZY73              	100.00%
Bootstrap support for A8J3D3 as seed ortholog is 100%.
Bootstrap support for Q8ZY73 as seed ortholog is 60%.
Alternative seed ortholog is Q8ZY38 (14 bits away from this cluster)

Group of orthologs #254. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.aerophilum:8

A8JE06              	100.00%		Q8ZZK3              	100.00%
Bootstrap support for A8JE06 as seed ortholog is 100%.
Bootstrap support for Q8ZZK3 as seed ortholog is 49%.
Alternative seed ortholog is Q8ZZJ6 (8 bits away from this cluster)

Group of orthologs #255. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.aerophilum:99

A8HS48              	100.00%		Q8ZT21              	100.00%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for Q8ZT21 as seed ortholog is 100%.

Group of orthologs #256. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.aerophilum:99

A8IC72              	100.00%		Q8ZZ91              	100.00%
Bootstrap support for A8IC72 as seed ortholog is 100%.
Bootstrap support for Q8ZZ91 as seed ortholog is 100%.

Group of orthologs #257. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.aerophilum:99

A8JDP4              	100.00%		Q8ZVA7              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for Q8ZVA7 as seed ortholog is 100%.

Group of orthologs #258. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.aerophilum:98

A8IZ01              	100.00%		Q8ZZH6              	100.00%
Bootstrap support for A8IZ01 as seed ortholog is 100%.
Bootstrap support for Q8ZZH6 as seed ortholog is 100%.

Group of orthologs #259. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.aerophilum:97

A8J1K0              	100.00%		Q8ZWI6              	100.00%
A8J9X3              	63.43%		
A8IST3              	53.60%		
Bootstrap support for A8J1K0 as seed ortholog is 100%.
Bootstrap support for Q8ZWI6 as seed ortholog is 100%.

Group of orthologs #260. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.aerophilum:97

P93106              	100.00%		Q8ZVB2              	100.00%
A8JHU0              	45.24%		
Bootstrap support for P93106 as seed ortholog is 92%.
Bootstrap support for Q8ZVB2 as seed ortholog is 100%.

Group of orthologs #261. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.aerophilum:43

A8J7H1              	100.00%		Q8ZT10              	100.00%
Bootstrap support for A8J7H1 as seed ortholog is 100%.
Bootstrap support for Q8ZT10 as seed ortholog is 95%.

Group of orthologs #262. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.aerophilum:96

A8J018              	100.00%		Q8ZU14              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for Q8ZU14 as seed ortholog is 100%.

Group of orthologs #263. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.aerophilum:96

A8J339              	100.00%		Q8ZUM0              	100.00%
Bootstrap support for A8J339 as seed ortholog is 100%.
Bootstrap support for Q8ZUM0 as seed ortholog is 100%.

Group of orthologs #264. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.aerophilum:96

A8J5Q4              	100.00%		Q8ZYT3              	100.00%
Bootstrap support for A8J5Q4 as seed ortholog is 100%.
Bootstrap support for Q8ZYT3 as seed ortholog is 100%.

Group of orthologs #265. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.aerophilum:95

A8HQ78              	100.00%		Q8ZYA5              	100.00%
Bootstrap support for A8HQ78 as seed ortholog is 100%.
Bootstrap support for Q8ZYA5 as seed ortholog is 100%.

Group of orthologs #266. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.aerophilum:95

A8ICA8              	100.00%		Q7LX31              	100.00%
Bootstrap support for A8ICA8 as seed ortholog is 78%.
Bootstrap support for Q7LX31 as seed ortholog is 100%.

Group of orthologs #267. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.aerophilum:95

A8ICX5              	100.00%		Q8ZYQ3              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ3 as seed ortholog is 100%.

Group of orthologs #268. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.aerophilum:94

A8IJV1              	100.00%		Q8ZVG1              	100.00%
A8IS61              	33.21%		
A8ICS4              	21.79%		
A8J7F9              	18.08%		
A8IV98              	17.69%		
A8IWA5              	16.79%		
A8J3N3              	16.79%		
A8HQA8              	16.28%		
A8JHA8              	16.03%		
A8IT25              	15.64%		
A8HPW8              	15.51%		
A8J240              	13.97%		
A8J6S5              	13.85%		
A8JBN7              	13.85%		
A8IBY2              	13.72%		
A8J2I8              	13.59%		
A8JIJ1              	13.33%		
A8IP17              	13.21%		
A8J5S3              	12.95%		
A8JCM3              	12.82%		
A8IRS1              	11.79%		
A8HPX8              	9.87%		
A8J8R3              	9.74%		
A8I675              	9.10%		
A8J8R1              	8.72%		
A8J5F6              	8.21%		
A8IRR7              	7.31%		
Bootstrap support for A8IJV1 as seed ortholog is 100%.
Bootstrap support for Q8ZVG1 as seed ortholog is 100%.

Group of orthologs #269. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.aerophilum:94

A8JI31              	100.00%		Q8ZY21              	100.00%
Bootstrap support for A8JI31 as seed ortholog is 100%.
Bootstrap support for Q8ZY21 as seed ortholog is 100%.

Group of orthologs #270. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.aerophilum:93

A8JCH3              	100.00%		Q8ZXT3              	100.00%
A8JDR4              	47.44%		
A8J8K1              	10.68%		
Bootstrap support for A8JCH3 as seed ortholog is 100%.
Bootstrap support for Q8ZXT3 as seed ortholog is 100%.

Group of orthologs #271. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 P.aerophilum:92

A8J004              	100.00%		Q8ZXZ5              	100.00%
Bootstrap support for A8J004 as seed ortholog is 85%.
Bootstrap support for Q8ZXZ5 as seed ortholog is 100%.

Group of orthologs #272. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.aerophilum:91

A8I3V3              	100.00%		Q8ZUU0              	100.00%
A8IXF1              	57.52%		
Bootstrap support for A8I3V3 as seed ortholog is 100%.
Bootstrap support for Q8ZUU0 as seed ortholog is 100%.

Group of orthologs #273. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.aerophilum:91

A8I4P5              	100.00%		Q8ZWI0              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for Q8ZWI0 as seed ortholog is 100%.

Group of orthologs #274. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.aerophilum:91

A8J5Z0              	100.00%		Q8ZTT3              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 63%.
Alternative seed ortholog is A8HXD0 (24 bits away from this cluster)
Bootstrap support for Q8ZTT3 as seed ortholog is 100%.

Group of orthologs #275. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.aerophilum:13

A8JFE1              	100.00%		Q7LX30              	100.00%
Bootstrap support for A8JFE1 as seed ortholog is 100%.
Bootstrap support for Q7LX30 as seed ortholog is 66%.
Alternative seed ortholog is Q7LX22 (13 bits away from this cluster)

Group of orthologs #276. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.aerophilum:91

A8JC08              	100.00%		Q8ZWV9              	100.00%
Bootstrap support for A8JC08 as seed ortholog is 100%.
Bootstrap support for Q8ZWV9 as seed ortholog is 100%.

Group of orthologs #277. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 P.aerophilum:90

A8IA03              	100.00%		Q8ZYE4              	100.00%
Q6UPR4              	27.94%		
Q6UPR1              	14.32%		
Q8S3U7              	12.59%		
A8JD57              	10.74%		
A8IIZ5              	10.74%		
A8IHF8              	10.51%		
Bootstrap support for A8IA03 as seed ortholog is 65%.
Alternative seed ortholog is A8I4D5 (17 bits away from this cluster)
Bootstrap support for Q8ZYE4 as seed ortholog is 100%.

Group of orthologs #278. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.aerophilum:90

A8JB06              	100.00%		Q8ZUK9              	100.00%
Bootstrap support for A8JB06 as seed ortholog is 100%.
Bootstrap support for Q8ZUK9 as seed ortholog is 100%.

Group of orthologs #279. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.aerophilum:89

A8IGE2              	100.00%		Q8ZU79              	100.00%
                    	       		Q8ZSY4              	11.32%
Bootstrap support for A8IGE2 as seed ortholog is 100%.
Bootstrap support for Q8ZU79 as seed ortholog is 100%.

Group of orthologs #280. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.aerophilum:89

A8HMG7              	100.00%		Q8ZTD4              	100.00%
Bootstrap support for A8HMG7 as seed ortholog is 97%.
Bootstrap support for Q8ZTD4 as seed ortholog is 100%.

Group of orthologs #281. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.aerophilum:88

A8HPI1              	100.00%		Q8ZU99              	100.00%
Bootstrap support for A8HPI1 as seed ortholog is 100%.
Bootstrap support for Q8ZU99 as seed ortholog is 100%.

Group of orthologs #282. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.aerophilum:88

A8HPN6              	100.00%		Q8ZVM7              	100.00%
Bootstrap support for A8HPN6 as seed ortholog is 100%.
Bootstrap support for Q8ZVM7 as seed ortholog is 100%.

Group of orthologs #283. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.aerophilum:87

A8HYG8              	100.00%		Q8ZW36              	100.00%
Bootstrap support for A8HYG8 as seed ortholog is 100%.
Bootstrap support for Q8ZW36 as seed ortholog is 100%.

Group of orthologs #284. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.aerophilum:87

A8HT82              	100.00%		Q8ZY04              	100.00%
Bootstrap support for A8HT82 as seed ortholog is 100%.
Bootstrap support for Q8ZY04 as seed ortholog is 100%.

Group of orthologs #285. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.aerophilum:86

A8IWF2              	100.00%		Q8ZU82              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 65%.
Alternative seed ortholog is A8J5K8 (24 bits away from this cluster)
Bootstrap support for Q8ZU82 as seed ortholog is 100%.

Group of orthologs #286. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.aerophilum:86

A8IW70              	100.00%		Q8ZY96              	100.00%
Bootstrap support for A8IW70 as seed ortholog is 100%.
Bootstrap support for Q8ZY96 as seed ortholog is 100%.

Group of orthologs #287. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.aerophilum:86

A8J097              	100.00%		Q8ZWW5              	100.00%
Bootstrap support for A8J097 as seed ortholog is 100%.
Bootstrap support for Q8ZWW5 as seed ortholog is 100%.

Group of orthologs #288. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.aerophilum:86

A8JAT8              	100.00%		Q8ZYE5              	100.00%
Bootstrap support for A8JAT8 as seed ortholog is 100%.
Bootstrap support for Q8ZYE5 as seed ortholog is 100%.

Group of orthologs #289. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.aerophilum:84

A8IRB7              	100.00%		Q8ZU08              	100.00%
Bootstrap support for A8IRB7 as seed ortholog is 62%.
Alternative seed ortholog is A8J3J7 (10 bits away from this cluster)
Bootstrap support for Q8ZU08 as seed ortholog is 100%.

Group of orthologs #290. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 P.aerophilum:84

A8J8M9              	100.00%		Q8ZU80              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 99%.
Bootstrap support for Q8ZU80 as seed ortholog is 100%.

Group of orthologs #291. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.aerophilum:29

A8IK69              	100.00%		Q8ZVX6              	100.00%
A8JEY5              	8.88%		
Bootstrap support for A8IK69 as seed ortholog is 100%.
Bootstrap support for Q8ZVX6 as seed ortholog is 90%.

Group of orthologs #292. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.aerophilum:82

A8JHY2              	100.00%		Q8ZST3              	100.00%
                    	       		Q8ZXD4              	100.00%
Bootstrap support for A8JHY2 as seed ortholog is 100%.
Bootstrap support for Q8ZST3 as seed ortholog is 100%.
Bootstrap support for Q8ZXD4 as seed ortholog is 100%.

Group of orthologs #293. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.aerophilum:82

A8HX36              	100.00%		Q8ZWP9              	100.00%
Bootstrap support for A8HX36 as seed ortholog is 100%.
Bootstrap support for Q8ZWP9 as seed ortholog is 100%.

Group of orthologs #294. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.aerophilum:82

A8ICK6              	100.00%		Q8ZUL0              	100.00%
Bootstrap support for A8ICK6 as seed ortholog is 100%.
Bootstrap support for Q8ZUL0 as seed ortholog is 100%.

Group of orthologs #295. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.aerophilum:80

Q8LP67              	100.00%		Q8ZWA9              	100.00%
A8JH07              	97.11%		
A8ILI7              	45.00%		
A8J993              	32.18%		
A8J0U4              	32.01%		
A8J0U2              	31.93%		
A8J399              	31.68%		
A8ILT7              	31.51%		
A8J0U0              	31.27%		
A8J0U1              	31.18%		
Bootstrap support for Q8LP67 as seed ortholog is 100%.
Bootstrap support for Q8ZWA9 as seed ortholog is 100%.

Group of orthologs #296. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.aerophilum:79

A8J914              	100.00%		Q8ZTF3              	100.00%
A2PZC3              	95.35%		
A8IVU2              	57.37%		
A8J9H0              	33.11%		
Bootstrap support for A8J914 as seed ortholog is 100%.
Bootstrap support for Q8ZTF3 as seed ortholog is 100%.

Group of orthologs #297. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.aerophilum:79

A8IVU0              	100.00%		Q8ZYQ1              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ1 as seed ortholog is 100%.

Group of orthologs #298. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.aerophilum:79

A8J239              	100.00%		Q8ZW50              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for Q8ZW50 as seed ortholog is 100%.

Group of orthologs #299. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.aerophilum:79

A8JI10              	100.00%		Q8ZYM4              	100.00%
Bootstrap support for A8JI10 as seed ortholog is 100%.
Bootstrap support for Q8ZYM4 as seed ortholog is 100%.

Group of orthologs #300. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.aerophilum:78

A8HY12              	100.00%		Q8ZT56              	100.00%
A8J6F5              	22.56%		
A8IRJ0              	15.04%		
A8J9R4              	13.48%		
A8J5V2              	10.16%		
O64927              	7.13%		
A8JFB3              	5.86%		
A8JJB6              	5.37%		
Bootstrap support for A8HY12 as seed ortholog is 100%.
Bootstrap support for Q8ZT56 as seed ortholog is 100%.

Group of orthologs #301. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.aerophilum:78

A8HR39              	100.00%		Q8ZTN9              	100.00%
A8I495              	23.02%		
A8I882              	22.19%		
Bootstrap support for A8HR39 as seed ortholog is 100%.
Bootstrap support for Q8ZTN9 as seed ortholog is 100%.

Group of orthologs #302. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.aerophilum:78

A8J1Z0              	100.00%		Q8ZW13              	100.00%
A8J8C1              	26.59%		
Bootstrap support for A8J1Z0 as seed ortholog is 100%.
Bootstrap support for Q8ZW13 as seed ortholog is 100%.

Group of orthologs #303. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.aerophilum:77

A8I2D8              	100.00%		Q8ZYE1              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for Q8ZYE1 as seed ortholog is 100%.

Group of orthologs #304. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.aerophilum:77

A8IA18              	100.00%		Q8ZVV8              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for Q8ZVV8 as seed ortholog is 100%.

Group of orthologs #305. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.aerophilum:77

A8JHC3              	100.00%		Q8ZWL3              	100.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for Q8ZWL3 as seed ortholog is 100%.

Group of orthologs #306. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.aerophilum:76

A8JA68              	100.00%		Q8ZYJ8              	100.00%
Bootstrap support for A8JA68 as seed ortholog is 59%.
Alternative seed ortholog is A8JGW6 (7 bits away from this cluster)
Bootstrap support for Q8ZYJ8 as seed ortholog is 100%.

Group of orthologs #307. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.aerophilum:75

A8I4T2              	100.00%		Q8ZTT4              	100.00%
Bootstrap support for A8I4T2 as seed ortholog is 34%.
Alternative seed ortholog is A8I8Z4 (18 bits away from this cluster)
Bootstrap support for Q8ZTT4 as seed ortholog is 100%.

Group of orthologs #308. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.aerophilum:75

A8ITM4              	100.00%		Q8ZYT2              	100.00%
Bootstrap support for A8ITM4 as seed ortholog is 100%.
Bootstrap support for Q8ZYT2 as seed ortholog is 100%.

Group of orthologs #309. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.aerophilum:75

A8IVW9              	100.00%		Q8ZXA6              	100.00%
Bootstrap support for A8IVW9 as seed ortholog is 100%.
Bootstrap support for Q8ZXA6 as seed ortholog is 100%.

Group of orthologs #310. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.aerophilum:30

A8HMC2              	100.00%		Q8ZZ46              	100.00%
Bootstrap support for A8HMC2 as seed ortholog is 61%.
Alternative seed ortholog is A8JCY9 (12 bits away from this cluster)
Bootstrap support for Q8ZZ46 as seed ortholog is 78%.

Group of orthologs #311. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.aerophilum:74

A8HXC5              	100.00%		Q8ZY91              	100.00%
Bootstrap support for A8HXC5 as seed ortholog is 100%.
Bootstrap support for Q8ZY91 as seed ortholog is 100%.

Group of orthologs #312. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.aerophilum:74

A8J7M2              	100.00%		Q8ZW86              	100.00%
Bootstrap support for A8J7M2 as seed ortholog is 100%.
Bootstrap support for Q8ZW86 as seed ortholog is 100%.

Group of orthologs #313. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.aerophilum:73

A8IQD4              	100.00%		Q8ZXL6              	100.00%
Bootstrap support for A8IQD4 as seed ortholog is 83%.
Bootstrap support for Q8ZXL6 as seed ortholog is 100%.

Group of orthologs #314. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.aerophilum:73

A8JGN6              	100.00%		Q8ZVM8              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for Q8ZVM8 as seed ortholog is 100%.

Group of orthologs #315. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.aerophilum:72

A8ITX1              	100.00%		Q8ZYP2              	100.00%
Bootstrap support for A8ITX1 as seed ortholog is 100%.
Bootstrap support for Q8ZYP2 as seed ortholog is 100%.

Group of orthologs #316. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.aerophilum:72

A8IWA3              	100.00%		Q8ZZC7              	100.00%
Bootstrap support for A8IWA3 as seed ortholog is 100%.
Bootstrap support for Q8ZZC7 as seed ortholog is 100%.

Group of orthologs #317. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.aerophilum:72

A8J352              	100.00%		Q8ZYI0              	100.00%
Bootstrap support for A8J352 as seed ortholog is 100%.
Bootstrap support for Q8ZYI0 as seed ortholog is 100%.

Group of orthologs #318. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.aerophilum:71

A8I718              	100.00%		Q8ZWK9              	100.00%
A8IEM7              	24.12%		
Bootstrap support for A8I718 as seed ortholog is 100%.
Bootstrap support for Q8ZWK9 as seed ortholog is 100%.

Group of orthologs #319. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.aerophilum:71

A8I7Y8              	100.00%		Q8ZU30              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for Q8ZU30 as seed ortholog is 100%.

Group of orthologs #320. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.aerophilum:71

A8J6G6              	100.00%		Q8ZUX8              	100.00%
Bootstrap support for A8J6G6 as seed ortholog is 100%.
Bootstrap support for Q8ZUX8 as seed ortholog is 100%.

Group of orthologs #321. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.aerophilum:71

A8J8D4              	100.00%		Q8ZTW0              	100.00%
Bootstrap support for A8J8D4 as seed ortholog is 75%.
Bootstrap support for Q8ZTW0 as seed ortholog is 100%.

Group of orthologs #322. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.aerophilum:71

Q00471              	100.00%		Q8ZXC5              	100.00%
Bootstrap support for Q00471 as seed ortholog is 100%.
Bootstrap support for Q8ZXC5 as seed ortholog is 100%.

Group of orthologs #323. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.aerophilum:70

A8JFA2              	100.00%		Q8ZU60              	100.00%
A8I0H8              	11.99%		
A8JGW8              	11.05%		
A8JHC8              	5.81%		
Bootstrap support for A8JFA2 as seed ortholog is 100%.
Bootstrap support for Q8ZU60 as seed ortholog is 100%.

Group of orthologs #324. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.aerophilum:70

A8IKP1              	100.00%		Q8ZTA7              	100.00%
Bootstrap support for A8IKP1 as seed ortholog is 100%.
Bootstrap support for Q8ZTA7 as seed ortholog is 100%.

Group of orthologs #325. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.aerophilum:70

A8ICT1              	100.00%		Q8ZYQ6              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ6 as seed ortholog is 100%.

Group of orthologs #326. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.aerophilum:70

A8IYG7              	100.00%		Q8ZT20              	100.00%
Bootstrap support for A8IYG7 as seed ortholog is 100%.
Bootstrap support for Q8ZT20 as seed ortholog is 100%.

Group of orthologs #327. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.aerophilum:26

A8HNE8              	100.00%		Q8ZU16              	100.00%
Bootstrap support for A8HNE8 as seed ortholog is 56%.
Alternative seed ortholog is A8JAG1 (7 bits away from this cluster)
Bootstrap support for Q8ZU16 as seed ortholog is 68%.
Alternative seed ortholog is Q8ZYT5 (26 bits away from this cluster)

Group of orthologs #328. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.aerophilum:69

A8I297              	100.00%		P56635              	100.00%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for P56635 as seed ortholog is 100%.

Group of orthologs #329. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.aerophilum:69

A8HS59              	100.00%		Q8ZWH7              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for Q8ZWH7 as seed ortholog is 100%.

Group of orthologs #330. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.aerophilum:69

A8HSJ0              	100.00%		Q8ZYP9              	100.00%
Bootstrap support for A8HSJ0 as seed ortholog is 100%.
Bootstrap support for Q8ZYP9 as seed ortholog is 100%.

Group of orthologs #331. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.aerophilum:69

A8J2J9              	100.00%		Q8ZVA9              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for Q8ZVA9 as seed ortholog is 100%.

Group of orthologs #332. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.aerophilum:69

A8J5B8              	100.00%		Q8ZVB6              	100.00%
Bootstrap support for A8J5B8 as seed ortholog is 100%.
Bootstrap support for Q8ZVB6 as seed ortholog is 100%.

Group of orthologs #333. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.aerophilum:68

A8I8Z1              	100.00%		Q8ZTE3              	100.00%
Bootstrap support for A8I8Z1 as seed ortholog is 100%.
Bootstrap support for Q8ZTE3 as seed ortholog is 100%.

Group of orthologs #334. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.aerophilum:68

A8I4H4              	100.00%		Q8ZXV9              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for Q8ZXV9 as seed ortholog is 100%.

Group of orthologs #335. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.aerophilum:68

A8JB95              	100.00%		Q8ZZ56              	100.00%
Bootstrap support for A8JB95 as seed ortholog is 65%.
Alternative seed ortholog is A8JCY9 (14 bits away from this cluster)
Bootstrap support for Q8ZZ56 as seed ortholog is 100%.

Group of orthologs #336. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.aerophilum:67

A8IFR5              	100.00%		Q8ZT70              	100.00%
Bootstrap support for A8IFR5 as seed ortholog is 100%.
Bootstrap support for Q8ZT70 as seed ortholog is 100%.

Group of orthologs #337. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.aerophilum:67

A8ILL5              	100.00%		Q8ZTY5              	100.00%
Bootstrap support for A8ILL5 as seed ortholog is 100%.
Bootstrap support for Q8ZTY5 as seed ortholog is 100%.

Group of orthologs #338. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.aerophilum:67

A8IS18              	100.00%		Q8ZTE6              	100.00%
Bootstrap support for A8IS18 as seed ortholog is 100%.
Bootstrap support for Q8ZTE6 as seed ortholog is 100%.

Group of orthologs #339. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.aerophilum:67

A8IYG3              	100.00%		Q8ZUN9              	100.00%
Bootstrap support for A8IYG3 as seed ortholog is 100%.
Bootstrap support for Q8ZUN9 as seed ortholog is 100%.

Group of orthologs #340. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.aerophilum:2

A8HNE6              	100.00%		Q8ZZ45              	100.00%
A8J3S2              	9.67%		Q8ZZ41              	13.38%
Bootstrap support for A8HNE6 as seed ortholog is 100%.
Bootstrap support for Q8ZZ45 as seed ortholog is 62%.
Alternative seed ortholog is Q8ZZ49 (2 bits away from this cluster)

Group of orthologs #341. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.aerophilum:66

A8I9K4              	100.00%		Q8ZTP3              	100.00%
Bootstrap support for A8I9K4 as seed ortholog is 100%.
Bootstrap support for Q8ZTP3 as seed ortholog is 100%.

Group of orthologs #342. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.aerophilum:66

A8IM74              	100.00%		Q8ZTY3              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for Q8ZTY3 as seed ortholog is 100%.

Group of orthologs #343. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.aerophilum:65

A8J2G4              	100.00%		Q8ZVV9              	100.00%
Bootstrap support for A8J2G4 as seed ortholog is 100%.
Bootstrap support for Q8ZVV9 as seed ortholog is 100%.

Group of orthologs #344. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.aerophilum:64

A8IAF3              	100.00%		Q8ZVD7              	100.00%
A8JGM8              	7.77%		
Bootstrap support for A8IAF3 as seed ortholog is 100%.
Bootstrap support for Q8ZVD7 as seed ortholog is 100%.

Group of orthologs #345. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.aerophilum:64

A8IRW9              	100.00%		Q8ZY35              	100.00%
A8IRW7              	33.98%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for Q8ZY35 as seed ortholog is 100%.

Group of orthologs #346. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.aerophilum:64

A8IQT7              	100.00%		Q8ZSW2              	100.00%
Bootstrap support for A8IQT7 as seed ortholog is 100%.
Bootstrap support for Q8ZSW2 as seed ortholog is 100%.

Group of orthologs #347. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.aerophilum:64

A8ITP1              	100.00%		Q8ZX20              	100.00%
Bootstrap support for A8ITP1 as seed ortholog is 100%.
Bootstrap support for Q8ZX20 as seed ortholog is 100%.

Group of orthologs #348. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.aerophilum:64

A8J236              	100.00%		Q8ZY31              	100.00%
Bootstrap support for A8J236 as seed ortholog is 100%.
Bootstrap support for Q8ZY31 as seed ortholog is 100%.

Group of orthologs #349. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.aerophilum:7

A8HN54              	100.00%		Q8ZSP4              	100.00%
Bootstrap support for A8HN54 as seed ortholog is 100%.
Bootstrap support for Q8ZSP4 as seed ortholog is 41%.
Alternative seed ortholog is Q8ZW57 (7 bits away from this cluster)

Group of orthologs #350. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.aerophilum:63

A8J5C3              	100.00%		Q8ZX11              	100.00%
Bootstrap support for A8J5C3 as seed ortholog is 100%.
Bootstrap support for Q8ZX11 as seed ortholog is 100%.

Group of orthologs #351. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.aerophilum:62

A8JDV8              	100.00%		Q8ZVH4              	100.00%
A8I8N8              	7.98%		
Bootstrap support for A8JDV8 as seed ortholog is 100%.
Bootstrap support for Q8ZVH4 as seed ortholog is 100%.

Group of orthologs #352. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.aerophilum:62

A8I2T0              	100.00%		Q8ZT50              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for Q8ZT50 as seed ortholog is 100%.

Group of orthologs #353. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.aerophilum:62

A8I795              	100.00%		Q8ZYL1              	100.00%
Bootstrap support for A8I795 as seed ortholog is 100%.
Bootstrap support for Q8ZYL1 as seed ortholog is 100%.

Group of orthologs #354. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.aerophilum:62

A8J599              	100.00%		Q8ZV48              	100.00%
Bootstrap support for A8J599 as seed ortholog is 100%.
Bootstrap support for Q8ZV48 as seed ortholog is 100%.

Group of orthologs #355. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.aerophilum:62

A8JG35              	100.00%		Q8ZYA3              	100.00%
Bootstrap support for A8JG35 as seed ortholog is 100%.
Bootstrap support for Q8ZYA3 as seed ortholog is 100%.

Group of orthologs #356. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8J3L0              	100.00%		Q8ZT99              	100.00%
A8IZ81              	25.50%		
A8IRP0              	23.37%		
A8J006              	21.73%		
A8JFB8              	20.98%		
A8J0K6              	20.10%		
A8JHW9              	17.34%		
A8J9M5              	17.21%		
Bootstrap support for A8J3L0 as seed ortholog is 100%.
Bootstrap support for Q8ZT99 as seed ortholog is 100%.

Group of orthologs #357. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8ISK2              	100.00%		Q8ZSV9              	100.00%
A8IVC2              	100.00%		
Bootstrap support for A8ISK2 as seed ortholog is 100%.
Bootstrap support for A8IVC2 as seed ortholog is 100%.
Bootstrap support for Q8ZSV9 as seed ortholog is 100%.

Group of orthologs #358. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8J633              	100.00%		Q8ZZH5              	100.00%
A8I8V6              	42.15%		
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for Q8ZZH5 as seed ortholog is 100%.

Group of orthologs #359. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8HY08              	100.00%		Q8ZVN1              	100.00%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for Q8ZVN1 as seed ortholog is 100%.

Group of orthologs #360. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8IVE2              	100.00%		Q8ZXN8              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for Q8ZXN8 as seed ortholog is 100%.

Group of orthologs #361. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8J149              	100.00%		Q8ZTE8              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for Q8ZTE8 as seed ortholog is 100%.

Group of orthologs #362. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.aerophilum:61

A8JBN5              	100.00%		Q8ZTG4              	100.00%
Bootstrap support for A8JBN5 as seed ortholog is 100%.
Bootstrap support for Q8ZTG4 as seed ortholog is 100%.

Group of orthologs #363. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:59

A8J3Y2              	100.00%		Q8ZU53              	100.00%
A8HMZ3              	63.27%		
Bootstrap support for A8J3Y2 as seed ortholog is 100%.
Bootstrap support for Q8ZU53 as seed ortholog is 100%.

Group of orthologs #364. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.aerophilum:59

A8J6G9              	100.00%		Q8ZTT5              	100.00%
A8ICE4              	26.02%		
Bootstrap support for A8J6G9 as seed ortholog is 71%.
Alternative seed ortholog is A8J597 (12 bits away from this cluster)
Bootstrap support for Q8ZTT5 as seed ortholog is 100%.

Group of orthologs #365. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:59

Q6QJE2              	100.00%		Q8ZT34              	100.00%
Q8RVC7              	11.96%		
Bootstrap support for Q6QJE2 as seed ortholog is 100%.
Bootstrap support for Q8ZT34 as seed ortholog is 100%.

Group of orthologs #366. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.aerophilum:59

A8IJY1              	100.00%		Q8ZTX9              	100.00%
Bootstrap support for A8IJY1 as seed ortholog is 47%.
Alternative seed ortholog is A8I4N7 (1 bits away from this cluster)
Bootstrap support for Q8ZTX9 as seed ortholog is 100%.

Group of orthologs #367. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.aerophilum:59

A8J2Y6              	100.00%		Q8ZWZ6              	100.00%
Bootstrap support for A8J2Y6 as seed ortholog is 100%.
Bootstrap support for Q8ZWZ6 as seed ortholog is 100%.

Group of orthologs #368. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.aerophilum:58

A8I305              	36.65%		Q8ZT45              	100.00%
A8IVZ9              	100.00%		Q8ZUY0              	100.00%
A8IW00              	100.00%		
A8IX59              	10.93%		
Bootstrap support for A8IVZ9 as seed ortholog is 100%.
Bootstrap support for A8IW00 as seed ortholog is 100%.
Bootstrap support for Q8ZT45 as seed ortholog is 100%.
Bootstrap support for Q8ZUY0 as seed ortholog is 100%.

Group of orthologs #369. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.aerophilum:58

A8J4F8              	100.00%		Q8ZTT0              	100.00%
                    	       		Q8ZX43              	6.01%
Bootstrap support for A8J4F8 as seed ortholog is 100%.
Bootstrap support for Q8ZTT0 as seed ortholog is 100%.

Group of orthologs #370. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.aerophilum:58

A8I0I1              	100.00%		Q8ZV65              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for Q8ZV65 as seed ortholog is 100%.

Group of orthologs #371. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.aerophilum:56

A8J820              	100.00%		Q8ZUB2              	100.00%
                    	       		Q8ZST7              	12.11%
                    	       		Q8ZUN6              	12.11%
                    	       		Q8ZWB5              	11.66%
                    	       		Q8ZXY7              	9.87%
                    	       		Q8ZVA4              	9.42%
                    	       		Q8ZXF1              	6.73%
                    	       		Q8ZX15              	6.28%
                    	       		Q8ZUB4              	5.38%
Bootstrap support for A8J820 as seed ortholog is 100%.
Bootstrap support for Q8ZUB2 as seed ortholog is 100%.

Group of orthologs #372. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.aerophilum:56

A8JD59              	100.00%		Q8ZTF9              	100.00%
Bootstrap support for A8JD59 as seed ortholog is 100%.
Bootstrap support for Q8ZTF9 as seed ortholog is 100%.

Group of orthologs #373. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.aerophilum:55

A8IEU2              	100.00%		Q8ZW27              	100.00%
A8I8J2              	10.47%		
A8IBL2              	6.98%		
Bootstrap support for A8IEU2 as seed ortholog is 100%.
Bootstrap support for Q8ZW27 as seed ortholog is 100%.

Group of orthologs #374. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.aerophilum:54

A8IRT8              	100.00%		Q8ZW85              	100.00%
A8IRT7              	64.12%		
Bootstrap support for A8IRT8 as seed ortholog is 100%.
Bootstrap support for Q8ZW85 as seed ortholog is 100%.

Group of orthologs #375. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.aerophilum:54

A8IF01              	100.00%		Q8ZWT7              	100.00%
Bootstrap support for A8IF01 as seed ortholog is 100%.
Bootstrap support for Q8ZWT7 as seed ortholog is 100%.

Group of orthologs #376. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.aerophilum:54

A8IJG5              	100.00%		Q8ZVN4              	100.00%
Bootstrap support for A8IJG5 as seed ortholog is 100%.
Bootstrap support for Q8ZVN4 as seed ortholog is 100%.

Group of orthologs #377. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.aerophilum:54

A8IV41              	100.00%		Q8ZU76              	100.00%
Bootstrap support for A8IV41 as seed ortholog is 100%.
Bootstrap support for Q8ZU76 as seed ortholog is 100%.

Group of orthologs #378. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.aerophilum:53

A8I3J5              	100.00%		Q8ZTW9              	100.00%
A8I8K4              	42.72%		
A8J901              	12.97%		
A8J6J4              	5.85%		
Bootstrap support for A8I3J5 as seed ortholog is 100%.
Bootstrap support for Q8ZTW9 as seed ortholog is 100%.

Group of orthologs #379. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.aerophilum:53

A8J951              	100.00%		Q8ZTB5              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for Q8ZTB5 as seed ortholog is 100%.

Group of orthologs #380. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.aerophilum:53

A8JEX6              	100.00%		Q8ZUQ3              	100.00%
Bootstrap support for A8JEX6 as seed ortholog is 100%.
Bootstrap support for Q8ZUQ3 as seed ortholog is 100%.

Group of orthologs #381. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.aerophilum:53

A8JBQ5              	100.00%		Q8ZZK5              	100.00%
Bootstrap support for A8JBQ5 as seed ortholog is 100%.
Bootstrap support for Q8ZZK5 as seed ortholog is 100%.

Group of orthologs #382. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.aerophilum:53

A8JIE5              	100.00%		Q8ZVW1              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for Q8ZVW1 as seed ortholog is 100%.

Group of orthologs #383. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.aerophilum:52

A8IW91              	100.00%		Q8ZXR6              	100.00%
A8J809              	8.10%		
Bootstrap support for A8IW91 as seed ortholog is 100%.
Bootstrap support for Q8ZXR6 as seed ortholog is 100%.

Group of orthologs #384. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 P.aerophilum:52

A8J834              	100.00%		Q8ZYG5              	100.00%
A8J2L7              	16.13%		
Bootstrap support for A8J834 as seed ortholog is 54%.
Alternative seed ortholog is A8IVB1 (2 bits away from this cluster)
Bootstrap support for Q8ZYG5 as seed ortholog is 100%.

Group of orthologs #385. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.aerophilum:52

A8HYJ4              	100.00%		Q8ZT04              	100.00%
Bootstrap support for A8HYJ4 as seed ortholog is 100%.
Bootstrap support for Q8ZT04 as seed ortholog is 100%.

Group of orthologs #386. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.aerophilum:52

A8IQE3              	100.00%		Q8ZYB4              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for Q8ZYB4 as seed ortholog is 100%.

Group of orthologs #387. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.aerophilum:52

A8J650              	100.00%		Q8ZV18              	100.00%
Bootstrap support for A8J650 as seed ortholog is 100%.
Bootstrap support for Q8ZV18 as seed ortholog is 100%.

Group of orthologs #388. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.aerophilum:52

A8JCZ5              	100.00%		Q8ZW45              	100.00%
Bootstrap support for A8JCZ5 as seed ortholog is 100%.
Bootstrap support for Q8ZW45 as seed ortholog is 100%.

Group of orthologs #389. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.aerophilum:51

A8HVN9              	100.00%		Q8ZTP1              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 56%.
Alternative seed ortholog is A8JEE2 (3 bits away from this cluster)
Bootstrap support for Q8ZTP1 as seed ortholog is 100%.

Group of orthologs #390. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.aerophilum:51

A8J8T5              	100.00%		Q8ZT08              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for Q8ZT08 as seed ortholog is 100%.

Group of orthologs #391. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.aerophilum:51

A8J8P4              	100.00%		Q8ZTJ2              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ2 as seed ortholog is 100%.

Group of orthologs #392. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.aerophilum:51

A8JG68              	100.00%		Q8ZXR9              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for Q8ZXR9 as seed ortholog is 100%.

Group of orthologs #393. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.aerophilum:51

A8JGX1              	100.00%		Q8ZYH2              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for Q8ZYH2 as seed ortholog is 100%.

Group of orthologs #394. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.aerophilum:50

A8HPB8              	100.00%		Q8ZYF3              	100.00%
A8HXY3              	11.13%		
Bootstrap support for A8HPB8 as seed ortholog is 100%.
Bootstrap support for Q8ZYF3 as seed ortholog is 100%.

Group of orthologs #395. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.aerophilum:50

A8JFC3              	100.00%		Q8ZUS2              	100.00%
                    	       		Q8ZXC0              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for Q8ZUS2 as seed ortholog is 100%.
Bootstrap support for Q8ZXC0 as seed ortholog is 100%.

Group of orthologs #396. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.aerophilum:49

A8IS69              	100.00%		Q8ZXW6              	100.00%
A8IS67              	63.09%		
A8IQK6              	42.59%		
A8JH87              	33.91%		
A8IPY0              	18.45%		
Bootstrap support for A8IS69 as seed ortholog is 100%.
Bootstrap support for Q8ZXW6 as seed ortholog is 100%.

Group of orthologs #397. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.aerophilum:49

A8J0V6              	100.00%		Q8ZTY4              	100.00%
A8J576              	100.00%		
Bootstrap support for A8J0V6 as seed ortholog is 100%.
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for Q8ZTY4 as seed ortholog is 100%.

Group of orthologs #398. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.aerophilum:49

A8J868              	100.00%		Q8ZX04              	100.00%
Bootstrap support for A8J868 as seed ortholog is 54%.
Alternative seed ortholog is A8IRQ3 (3 bits away from this cluster)
Bootstrap support for Q8ZX04 as seed ortholog is 100%.

Group of orthologs #399. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.aerophilum:48

A8JF94              	100.00%		Q8ZXU2              	100.00%
A8JA16              	7.14%		Q8ZXS6              	11.86%
A8IY90              	5.79%		
Bootstrap support for A8JF94 as seed ortholog is 100%.
Bootstrap support for Q8ZXU2 as seed ortholog is 100%.

Group of orthologs #400. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.aerophilum:48

A8J9T0              	100.00%		Q8ZTA5              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for Q8ZTA5 as seed ortholog is 100%.

Group of orthologs #401. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.aerophilum:46

A8IYX0              	100.00%		Q8ZXK6              	100.00%
                    	       		Q8ZY93              	7.33%
Bootstrap support for A8IYX0 as seed ortholog is 100%.
Bootstrap support for Q8ZXK6 as seed ortholog is 100%.

Group of orthologs #402. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.aerophilum:45

A8HTN0              	100.00%		Q8ZVN8              	100.00%
A8JB50              	22.22%		
A8IMW2              	20.56%		
A8HQF5              	20.40%		
A8IXU4              	17.91%		
A8JF16              	17.25%		
A8ISU1              	13.76%		
A8J4U2              	13.27%		
A8JBV3              	11.77%		
A8I1H8              	11.44%		
Q6V8K6              	11.44%		
A8JD79              	10.95%		
Q9ZSM9              	10.61%		
A8IWA1              	10.45%		
A8J6U8              	10.45%		
A8IVF8              	10.45%		
A8I1Q9              	10.28%		
A8JD03              	9.95%		
A8I2U7              	9.62%		
A8IA26              	9.62%		
A8HNN0              	9.45%		
A8IRV4              	9.29%		
A8HYQ4              	9.29%		
A8JC72              	9.29%		
A8I2Y6              	9.12%		
A8HSB7              	8.96%		
A8IYI4              	8.96%		
A8I6J1              	8.62%		
A8IVC7              	8.62%		
A8JGG1              	8.62%		
A8JIJ9              	8.62%		
A8J6I9              	8.46%		
A8JGG0              	8.46%		
A8J9W4              	8.46%		
A8JFM9              	7.79%		
A8I3A8              	7.63%		
A8I3T6              	7.63%		
A8JEA8              	7.63%		
A8IXQ6              	7.46%		
A8IEV8              	7.30%		
A8IIX1              	7.30%		
A8JI59              	7.30%		
A8I2G9              	6.97%		
A8I1P3              	6.80%		
A8J7U6              	6.80%		
A8II26              	6.47%		
A8J6Z7              	6.47%		
A8IPF1              	6.30%		
A8J4V2              	6.14%		
A8JHP6              	5.97%		
A8HM69              	5.97%		
A8HT53              	5.80%		
A8J691              	5.80%		
A8IYY3              	5.64%		
A8HM68              	5.64%		
A8I377              	5.64%		
A8I334              	5.47%		
A8IRE4              	5.47%		
A8J777              	5.47%		
A8J3B9              	5.31%		
A8JC82              	5.14%		
Bootstrap support for A8HTN0 as seed ortholog is 100%.
Bootstrap support for Q8ZVN8 as seed ortholog is 100%.

Group of orthologs #403. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.aerophilum:45

A8IZH7              	100.00%		Q8ZT74              	100.00%
A8J947              	29.00%		Q8ZW60              	43.68%
A8J7A7              	28.77%		Q8ZT06              	33.21%
A8J195              	21.35%		Q8ZTH2              	23.83%
A8JHI5              	20.65%		Q8ZTE7              	22.02%
A8JHQ7              	19.26%		Q8ZUH0              	16.25%
A8IRT2              	16.94%		
A8HN42              	14.85%		
A8J6A0              	13.23%		
A8ILX2              	12.53%		
A8HX77              	12.53%		
A8J0T6              	9.05%		
A8J6H1              	7.19%		
A8IRX5              	6.26%		
Bootstrap support for A8IZH7 as seed ortholog is 100%.
Bootstrap support for Q8ZT74 as seed ortholog is 100%.

Group of orthologs #404. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.aerophilum:44

A8J7S5              	100.00%		Q8ZZH3              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for Q8ZZH3 as seed ortholog is 100%.

Group of orthologs #405. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.aerophilum:43

A8J9J6              	100.00%		Q8ZVA3              	100.00%
A8IXZ2              	24.57%		Q8ZYP1              	18.69%
Bootstrap support for A8J9J6 as seed ortholog is 100%.
Bootstrap support for Q8ZVA3 as seed ortholog is 100%.

Group of orthologs #406. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.aerophilum:42

A8IJ00              	100.00%		Q8ZUX2              	100.00%
                    	       		Q8ZSU6              	44.86%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for Q8ZUX2 as seed ortholog is 100%.

Group of orthologs #407. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.aerophilum:42

A8JEN9              	100.00%		Q8ZTX2              	100.00%
                    	       		Q8ZSZ0              	19.85%
Bootstrap support for A8JEN9 as seed ortholog is 100%.
Bootstrap support for Q8ZTX2 as seed ortholog is 100%.

Group of orthologs #408. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.aerophilum:42

A8JBE3              	100.00%		Q8ZT54              	100.00%
Bootstrap support for A8JBE3 as seed ortholog is 100%.
Bootstrap support for Q8ZT54 as seed ortholog is 100%.

Group of orthologs #409. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.aerophilum:42

Q6V506              	100.00%		Q8ZSQ5              	100.00%
Bootstrap support for Q6V506 as seed ortholog is 100%.
Bootstrap support for Q8ZSQ5 as seed ortholog is 100%.