###################################
1943 groups of orthologs
2279 in-paralogs from C.reinhardtii
2713 in-paralogs from D.mojavensis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3991 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3991 D.mojavensis:3991

A8HPL0              	100.00%		B4KMA5              	100.00%
Bootstrap support for A8HPL0 as seed ortholog is 100%.
Bootstrap support for B4KMA5 as seed ortholog is 100%.

Group of orthologs #2. Best score 3538 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1401 D.mojavensis:1679

A8JHU7              	100.00%		B4K6Z4              	100.00%
Bootstrap support for A8JHU7 as seed ortholog is 100%.
Bootstrap support for B4K6Z4 as seed ortholog is 100%.

Group of orthologs #3. Best score 3444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:575 D.mojavensis:1757

A8J1M5              	100.00%		B4KE24              	100.00%
                    	       		B4K4L3              	15.68%
Bootstrap support for A8J1M5 as seed ortholog is 99%.
Bootstrap support for B4KE24 as seed ortholog is 100%.

Group of orthologs #4. Best score 2980 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 D.mojavensis:178

A8ISA6              	100.00%		B4KEE1              	100.00%
A8I3X6              	24.70%		
A8I5C3              	13.76%		
A8I3V9              	7.50%		
Bootstrap support for A8ISA6 as seed ortholog is 97%.
Bootstrap support for B4KEE1 as seed ortholog is 93%.

Group of orthologs #5. Best score 2559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 D.mojavensis:509

A8IV22              	100.00%		B4L2A0              	100.00%
Bootstrap support for A8IV22 as seed ortholog is 99%.
Bootstrap support for B4L2A0 as seed ortholog is 99%.

Group of orthologs #6. Best score 2362 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:988

A8JFP1              	100.00%		B4K645              	100.00%
Bootstrap support for A8JFP1 as seed ortholog is 89%.
Bootstrap support for B4K645 as seed ortholog is 100%.

Group of orthologs #7. Best score 2239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2239 D.mojavensis:880

A8JI25              	100.00%		B4KYI7              	100.00%
Bootstrap support for A8JI25 as seed ortholog is 100%.
Bootstrap support for B4KYI7 as seed ortholog is 100%.

Group of orthologs #8. Best score 2098 bits
Score difference with first non-orthologous sequence - C.reinhardtii:991 D.mojavensis:2098

A8IWA6              	100.00%		B4KY01              	100.00%
Bootstrap support for A8IWA6 as seed ortholog is 100%.
Bootstrap support for B4KY01 as seed ortholog is 100%.

Group of orthologs #9. Best score 1665 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1665 D.mojavensis:1665

A8I4S9              	100.00%		B4L4P9              	100.00%
Bootstrap support for A8I4S9 as seed ortholog is 100%.
Bootstrap support for B4L4P9 as seed ortholog is 100%.

Group of orthologs #10. Best score 1582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:97

Q9SMH5              	100.00%		B4KXB9              	100.00%
Bootstrap support for Q9SMH5 as seed ortholog is 75%.
Bootstrap support for B4KXB9 as seed ortholog is 79%.

Group of orthologs #11. Best score 1577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1100 D.mojavensis:838

A8IRZ2              	100.00%		B4L732              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for B4L732 as seed ortholog is 100%.

Group of orthologs #12. Best score 1310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1310 D.mojavensis:1310

A8I9Z6              	100.00%		B4KDW5              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 100%.
Bootstrap support for B4KDW5 as seed ortholog is 100%.

Group of orthologs #13. Best score 1286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1286 D.mojavensis:1286

A8HRR9              	100.00%		B4L978              	100.00%
Bootstrap support for A8HRR9 as seed ortholog is 100%.
Bootstrap support for B4L978 as seed ortholog is 100%.

Group of orthologs #14. Best score 1242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1242 D.mojavensis:1242

A8IDG4              	100.00%		B4KAW6              	100.00%
Bootstrap support for A8IDG4 as seed ortholog is 100%.
Bootstrap support for B4KAW6 as seed ortholog is 100%.

Group of orthologs #15. Best score 1232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1232 D.mojavensis:1232

A8INS0              	100.00%		B4K9Z3              	100.00%
Bootstrap support for A8INS0 as seed ortholog is 100%.
Bootstrap support for B4K9Z3 as seed ortholog is 100%.

Group of orthologs #16. Best score 1228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1228 D.mojavensis:1228

A8IY03              	100.00%		B4KPU7              	100.00%
Bootstrap support for A8IY03 as seed ortholog is 100%.
Bootstrap support for B4KPU7 as seed ortholog is 100%.

Group of orthologs #17. Best score 1207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:750 D.mojavensis:833

A8HW56              	100.00%		B4KLK1              	100.00%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for B4KLK1 as seed ortholog is 100%.

Group of orthologs #18. Best score 1170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1170 D.mojavensis:1170

A8JH01              	100.00%		B4KQG5              	100.00%
Bootstrap support for A8JH01 as seed ortholog is 100%.
Bootstrap support for B4KQG5 as seed ortholog is 100%.

Group of orthologs #19. Best score 1170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1170 D.mojavensis:1170

Q5DM57              	100.00%		B4KV02              	100.00%
Bootstrap support for Q5DM57 as seed ortholog is 100%.
Bootstrap support for B4KV02 as seed ortholog is 100%.

Group of orthologs #20. Best score 1156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1156 D.mojavensis:1156

A8JCA8              	100.00%		B4K8Q6              	100.00%
Bootstrap support for A8JCA8 as seed ortholog is 100%.
Bootstrap support for B4K8Q6 as seed ortholog is 100%.

Group of orthologs #21. Best score 1136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1136 D.mojavensis:946

A8J9F3              	100.00%		B4KX52              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for B4KX52 as seed ortholog is 100%.

Group of orthologs #22. Best score 1129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1129 D.mojavensis:1129

A8JD08              	100.00%		B4KIH0              	100.00%
Bootstrap support for A8JD08 as seed ortholog is 100%.
Bootstrap support for B4KIH0 as seed ortholog is 100%.

Group of orthologs #23. Best score 1084 bits
Score difference with first non-orthologous sequence - C.reinhardtii:827 D.mojavensis:775

A8HPJ0              	100.00%		B4KYH9              	100.00%
Bootstrap support for A8HPJ0 as seed ortholog is 100%.
Bootstrap support for B4KYH9 as seed ortholog is 100%.

Group of orthologs #24. Best score 1084 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1084 D.mojavensis:1084

A8J3Y6              	100.00%		B4KL66              	100.00%
Bootstrap support for A8J3Y6 as seed ortholog is 100%.
Bootstrap support for B4KL66 as seed ortholog is 100%.

Group of orthologs #25. Best score 1079 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1079 D.mojavensis:1079

A8IVM9              	100.00%		B4K539              	100.00%
Bootstrap support for A8IVM9 as seed ortholog is 100%.
Bootstrap support for B4K539 as seed ortholog is 100%.

Group of orthologs #26. Best score 1065 bits
Score difference with first non-orthologous sequence - C.reinhardtii:932 D.mojavensis:634

A8JHX9              	100.00%		B4KF22              	100.00%
                    	       		B4KLZ6              	57.01%
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for B4KF22 as seed ortholog is 100%.

Group of orthologs #27. Best score 1055 bits
Score difference with first non-orthologous sequence - C.reinhardtii:944 D.mojavensis:848

A8HMQ1              	100.00%		B4KF46              	100.00%
                    	       		B4KAJ1              	41.33%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for B4KF46 as seed ortholog is 100%.

Group of orthologs #28. Best score 1024 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1024 D.mojavensis:1024

A8JDR3              	100.00%		B4KJJ8              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for B4KJJ8 as seed ortholog is 100%.

Group of orthologs #29. Best score 1022 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1022 D.mojavensis:521

A8IY70              	100.00%		B4K8I3              	100.00%
Bootstrap support for A8IY70 as seed ortholog is 100%.
Bootstrap support for B4K8I3 as seed ortholog is 100%.

Group of orthologs #30. Best score 1017 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1017 D.mojavensis:1017

A8JEV6              	100.00%		B4L0C3              	100.00%
Bootstrap support for A8JEV6 as seed ortholog is 100%.
Bootstrap support for B4L0C3 as seed ortholog is 100%.

Group of orthologs #31. Best score 987 bits
Score difference with first non-orthologous sequence - C.reinhardtii:987 D.mojavensis:987

A8JGS8              	100.00%		B4KK62              	100.00%
Bootstrap support for A8JGS8 as seed ortholog is 100%.
Bootstrap support for B4KK62 as seed ortholog is 100%.

Group of orthologs #32. Best score 976 bits
Score difference with first non-orthologous sequence - C.reinhardtii:976 D.mojavensis:899

A8J2W2              	100.00%		B4KKH6              	100.00%
Bootstrap support for A8J2W2 as seed ortholog is 100%.
Bootstrap support for B4KKH6 as seed ortholog is 100%.

Group of orthologs #33. Best score 964 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 D.mojavensis:371

A8IK98              	100.00%		B4KSQ1              	100.00%
Bootstrap support for A8IK98 as seed ortholog is 100%.
Bootstrap support for B4KSQ1 as seed ortholog is 100%.

Group of orthologs #34. Best score 960 bits
Score difference with first non-orthologous sequence - C.reinhardtii:616 D.mojavensis:960

A8HXT4              	100.00%		B4KMG3              	100.00%
                    	       		B4KMG4              	69.39%
Bootstrap support for A8HXT4 as seed ortholog is 100%.
Bootstrap support for B4KMG3 as seed ortholog is 100%.

Group of orthologs #35. Best score 951 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 D.mojavensis:99

A8JEU4              	100.00%		B4K5W0              	100.00%
                    	       		B4L171              	34.53%
Bootstrap support for A8JEU4 as seed ortholog is 100%.
Bootstrap support for B4K5W0 as seed ortholog is 93%.

Group of orthologs #36. Best score 949 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 D.mojavensis:263

A8J1U1              	100.00%		B4KXG8              	100.00%
Bootstrap support for A8J1U1 as seed ortholog is 100%.
Bootstrap support for B4KXG8 as seed ortholog is 100%.

Group of orthologs #37. Best score 920 bits
Score difference with first non-orthologous sequence - C.reinhardtii:920 D.mojavensis:920

A8JFR3              	100.00%		B4KXV8              	100.00%
Bootstrap support for A8JFR3 as seed ortholog is 100%.
Bootstrap support for B4KXV8 as seed ortholog is 100%.

Group of orthologs #38. Best score 905 bits
Score difference with first non-orthologous sequence - C.reinhardtii:659 D.mojavensis:721

A8I542              	100.00%		B4KMB9              	100.00%
Bootstrap support for A8I542 as seed ortholog is 100%.
Bootstrap support for B4KMB9 as seed ortholog is 100%.

Group of orthologs #39. Best score 890 bits
Score difference with first non-orthologous sequence - C.reinhardtii:890 D.mojavensis:741

A8I9D7              	100.00%		B4L1X0              	100.00%
Bootstrap support for A8I9D7 as seed ortholog is 100%.
Bootstrap support for B4L1X0 as seed ortholog is 100%.

Group of orthologs #40. Best score 876 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 D.mojavensis:336

A8JGT9              	100.00%		B4KKI2              	100.00%
Bootstrap support for A8JGT9 as seed ortholog is 99%.
Bootstrap support for B4KKI2 as seed ortholog is 100%.

Group of orthologs #41. Best score 875 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 D.mojavensis:122

A8I7S9              	100.00%		B4L1X2              	100.00%
A8I7T8              	100.00%		
Bootstrap support for A8I7S9 as seed ortholog is 100%.
Bootstrap support for A8I7T8 as seed ortholog is 100%.
Bootstrap support for B4L1X2 as seed ortholog is 99%.

Group of orthologs #42. Best score 874 bits
Score difference with first non-orthologous sequence - C.reinhardtii:874 D.mojavensis:874

A8I8Y6              	100.00%		B4KLV7              	100.00%
Bootstrap support for A8I8Y6 as seed ortholog is 100%.
Bootstrap support for B4KLV7 as seed ortholog is 100%.

Group of orthologs #43. Best score 873 bits
Score difference with first non-orthologous sequence - C.reinhardtii:873 D.mojavensis:262

A8IVG0              	100.00%		B4KW84              	100.00%
                    	       		B4KYN6              	25.02%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for B4KW84 as seed ortholog is 99%.

Group of orthologs #44. Best score 851 bits
Score difference with first non-orthologous sequence - C.reinhardtii:594 D.mojavensis:851

A8HP06              	100.00%		B4KT93              	100.00%
Bootstrap support for A8HP06 as seed ortholog is 100%.
Bootstrap support for B4KT93 as seed ortholog is 100%.

Group of orthologs #45. Best score 848 bits
Score difference with first non-orthologous sequence - C.reinhardtii:848 D.mojavensis:848

A8IYK1              	100.00%		B4KI29              	100.00%
Q2VA40              	7.96%		
Bootstrap support for A8IYK1 as seed ortholog is 100%.
Bootstrap support for B4KI29 as seed ortholog is 100%.

Group of orthologs #46. Best score 839 bits
Score difference with first non-orthologous sequence - C.reinhardtii:839 D.mojavensis:839

A8J1C1              	100.00%		B4KTU8              	100.00%
Bootstrap support for A8J1C1 as seed ortholog is 100%.
Bootstrap support for B4KTU8 as seed ortholog is 100%.

Group of orthologs #47. Best score 831 bits
Score difference with first non-orthologous sequence - C.reinhardtii:683 D.mojavensis:703

A8I164              	100.00%		B4KGL4              	100.00%
                    	       		B4KGL7              	78.93%
                    	       		B4KGL5              	23.35%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for B4KGL4 as seed ortholog is 100%.

Group of orthologs #48. Best score 829 bits
Score difference with first non-orthologous sequence - C.reinhardtii:829 D.mojavensis:829

A8J6S7              	100.00%		B4K5W8              	100.00%
Bootstrap support for A8J6S7 as seed ortholog is 100%.
Bootstrap support for B4K5W8 as seed ortholog is 100%.

Group of orthologs #49. Best score 829 bits
Score difference with first non-orthologous sequence - C.reinhardtii:829 D.mojavensis:829

A8HZ23              	100.00%		B4KW89              	100.00%
Bootstrap support for A8HZ23 as seed ortholog is 100%.
Bootstrap support for B4KW89 as seed ortholog is 100%.

Group of orthologs #50. Best score 829 bits
Score difference with first non-orthologous sequence - C.reinhardtii:829 D.mojavensis:829

A8JCU1              	100.00%		B4KYE0              	100.00%
Bootstrap support for A8JCU1 as seed ortholog is 100%.
Bootstrap support for B4KYE0 as seed ortholog is 100%.

Group of orthologs #51. Best score 821 bits
Score difference with first non-orthologous sequence - C.reinhardtii:572 D.mojavensis:111

A8IXZ0              	100.00%		B4KME5              	100.00%
                    	       		B4K4Z6              	54.35%
                    	       		B4KMI5              	21.74%
Bootstrap support for A8IXZ0 as seed ortholog is 100%.
Bootstrap support for B4KME5 as seed ortholog is 99%.

Group of orthologs #52. Best score 821 bits
Score difference with first non-orthologous sequence - C.reinhardtii:598 D.mojavensis:88

Q540H1              	100.00%		B4KDS3              	100.00%
Bootstrap support for Q540H1 as seed ortholog is 100%.
Bootstrap support for B4KDS3 as seed ortholog is 99%.

Group of orthologs #53. Best score 816 bits
Score difference with first non-orthologous sequence - C.reinhardtii:816 D.mojavensis:816

A8JEP9              	100.00%		B4L3P9              	100.00%
Bootstrap support for A8JEP9 as seed ortholog is 100%.
Bootstrap support for B4L3P9 as seed ortholog is 100%.

Group of orthologs #54. Best score 807 bits
Score difference with first non-orthologous sequence - C.reinhardtii:807 D.mojavensis:807

A8IWF9              	100.00%		B4L3L0              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for B4L3L0 as seed ortholog is 100%.

Group of orthologs #55. Best score 802 bits
Score difference with first non-orthologous sequence - C.reinhardtii:802 D.mojavensis:802

A8J3A4              	100.00%		B4L0W2              	100.00%
Bootstrap support for A8J3A4 as seed ortholog is 100%.
Bootstrap support for B4L0W2 as seed ortholog is 100%.

Group of orthologs #56. Best score 799 bits
Score difference with first non-orthologous sequence - C.reinhardtii:799 D.mojavensis:661

A8JCF0              	100.00%		B4KA16              	100.00%
Bootstrap support for A8JCF0 as seed ortholog is 100%.
Bootstrap support for B4KA16 as seed ortholog is 100%.

Group of orthologs #57. Best score 797 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:280

A8IZU0              	100.00%		B4KSK2              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 99%.
Bootstrap support for B4KSK2 as seed ortholog is 100%.

Group of orthologs #58. Best score 795 bits
Score difference with first non-orthologous sequence - C.reinhardtii:795 D.mojavensis:795

A8JHA4              	100.00%		B4KQC3              	100.00%
Bootstrap support for A8JHA4 as seed ortholog is 100%.
Bootstrap support for B4KQC3 as seed ortholog is 100%.

Group of orthologs #59. Best score 782 bits
Score difference with first non-orthologous sequence - C.reinhardtii:692 D.mojavensis:782

A8JI26              	100.00%		B4KI12              	100.00%
Bootstrap support for A8JI26 as seed ortholog is 100%.
Bootstrap support for B4KI12 as seed ortholog is 100%.

Group of orthologs #60. Best score 775 bits
Score difference with first non-orthologous sequence - C.reinhardtii:454 D.mojavensis:775

A8IH85              	100.00%		B4L8Q4              	100.00%
                    	       		B4KBG0              	11.26%
Bootstrap support for A8IH85 as seed ortholog is 100%.
Bootstrap support for B4L8Q4 as seed ortholog is 100%.

Group of orthologs #61. Best score 772 bits
Score difference with first non-orthologous sequence - C.reinhardtii:772 D.mojavensis:772

A8JC00              	100.00%		B4KK68              	100.00%
Bootstrap support for A8JC00 as seed ortholog is 100%.
Bootstrap support for B4KK68 as seed ortholog is 100%.

Group of orthologs #62. Best score 769 bits
Score difference with first non-orthologous sequence - C.reinhardtii:675 D.mojavensis:395

A8JCQ8              	100.00%		B4KUM4              	100.00%
A8JCV8              	16.64%		
A8JFR9              	9.70%		
Bootstrap support for A8JCQ8 as seed ortholog is 100%.
Bootstrap support for B4KUM4 as seed ortholog is 100%.

Group of orthologs #63. Best score 767 bits
Score difference with first non-orthologous sequence - C.reinhardtii:653 D.mojavensis:654

A8J6M5              	100.00%		B4KSV5              	100.00%
A8J6M4              	77.41%		B4KVQ2              	21.58%
                    	       		B4KVQ3              	16.80%
Bootstrap support for A8J6M5 as seed ortholog is 100%.
Bootstrap support for B4KSV5 as seed ortholog is 100%.

Group of orthologs #64. Best score 767 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 D.mojavensis:112

A8IVJ6              	100.00%		B4KTN7              	100.00%
A8IVJ3              	36.83%		
Bootstrap support for A8IVJ6 as seed ortholog is 64%.
Alternative seed ortholog is A8J8G9 (20 bits away from this cluster)
Bootstrap support for B4KTN7 as seed ortholog is 96%.

Group of orthologs #65. Best score 767 bits
Score difference with first non-orthologous sequence - C.reinhardtii:767 D.mojavensis:767

A8IM71              	100.00%		B4K7Z2              	100.00%
Bootstrap support for A8IM71 as seed ortholog is 100%.
Bootstrap support for B4K7Z2 as seed ortholog is 100%.

Group of orthologs #66. Best score 766 bits
Score difference with first non-orthologous sequence - C.reinhardtii:718 D.mojavensis:766

A8HP46              	100.00%		B4L5U5              	100.00%
Bootstrap support for A8HP46 as seed ortholog is 100%.
Bootstrap support for B4L5U5 as seed ortholog is 100%.

Group of orthologs #67. Best score 765 bits
Score difference with first non-orthologous sequence - C.reinhardtii:765 D.mojavensis:765

A8IFY3              	100.00%		B4KSC8              	100.00%
Bootstrap support for A8IFY3 as seed ortholog is 100%.
Bootstrap support for B4KSC8 as seed ortholog is 100%.

Group of orthologs #68. Best score 760 bits
Score difference with first non-orthologous sequence - C.reinhardtii:653 D.mojavensis:652

A8IA45              	100.00%		B4K7G7              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for B4K7G7 as seed ortholog is 100%.

Group of orthologs #69. Best score 758 bits
Score difference with first non-orthologous sequence - C.reinhardtii:758 D.mojavensis:758

A8IUL6              	100.00%		B4KZ76              	100.00%
Bootstrap support for A8IUL6 as seed ortholog is 100%.
Bootstrap support for B4KZ76 as seed ortholog is 100%.

Group of orthologs #70. Best score 752 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:752

A8IHX1              	100.00%		B4KUD8              	100.00%
A8HW52              	63.47%		
Bootstrap support for A8IHX1 as seed ortholog is 98%.
Bootstrap support for B4KUD8 as seed ortholog is 100%.

Group of orthologs #71. Best score 749 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 D.mojavensis:57

A8IQU3              	100.00%		B4L7D0              	100.00%
Bootstrap support for A8IQU3 as seed ortholog is 99%.
Bootstrap support for B4L7D0 as seed ortholog is 96%.

Group of orthologs #72. Best score 748 bits
Score difference with first non-orthologous sequence - C.reinhardtii:438 D.mojavensis:322

A8J568              	100.00%		B4KP10              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for B4KP10 as seed ortholog is 99%.

Group of orthologs #73. Best score 747 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 D.mojavensis:492

A8JHY5              	100.00%		B4KNX2              	100.00%
Bootstrap support for A8JHY5 as seed ortholog is 100%.
Bootstrap support for B4KNX2 as seed ortholog is 100%.

Group of orthologs #74. Best score 742 bits
Score difference with first non-orthologous sequence - C.reinhardtii:537 D.mojavensis:455

A8HX15              	100.00%		B4KBA7              	100.00%
                    	       		B4LAR3              	9.08%
Bootstrap support for A8HX15 as seed ortholog is 100%.
Bootstrap support for B4KBA7 as seed ortholog is 100%.

Group of orthologs #75. Best score 735 bits
Score difference with first non-orthologous sequence - C.reinhardtii:735 D.mojavensis:599

A8IB70              	100.00%		B4K8H1              	100.00%
Bootstrap support for A8IB70 as seed ortholog is 100%.
Bootstrap support for B4K8H1 as seed ortholog is 100%.

Group of orthologs #76. Best score 733 bits
Score difference with first non-orthologous sequence - C.reinhardtii:733 D.mojavensis:733

A8JDP3              	100.00%		B4KFG6              	100.00%
Bootstrap support for A8JDP3 as seed ortholog is 100%.
Bootstrap support for B4KFG6 as seed ortholog is 100%.

Group of orthologs #77. Best score 732 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:79

A8IE86              	100.00%		B4K4S1              	100.00%
                    	       		B4KE00              	54.86%
                    	       		B4KE02              	52.22%
                    	       		B4KE01              	47.25%
                    	       		B4KE75              	43.14%
                    	       		B4K5W9              	17.53%
                    	       		B4K9Y9              	13.31%
                    	       		B4KQ05              	13.25%
                    	       		B4K5X0              	12.78%
                    	       		B4K9Z1              	11.62%
Bootstrap support for A8IE86 as seed ortholog is 91%.
Bootstrap support for B4K4S1 as seed ortholog is 89%.

Group of orthologs #78. Best score 731 bits
Score difference with first non-orthologous sequence - C.reinhardtii:675 D.mojavensis:731

A8JH39              	100.00%		B4K8H5              	100.00%
Bootstrap support for A8JH39 as seed ortholog is 100%.
Bootstrap support for B4K8H5 as seed ortholog is 100%.

Group of orthologs #79. Best score 727 bits
Score difference with first non-orthologous sequence - C.reinhardtii:727 D.mojavensis:727

A8IVJ7              	100.00%		B4L1Y6              	100.00%
Bootstrap support for A8IVJ7 as seed ortholog is 100%.
Bootstrap support for B4L1Y6 as seed ortholog is 100%.

Group of orthologs #80. Best score 721 bits
Score difference with first non-orthologous sequence - C.reinhardtii:721 D.mojavensis:721

A8HSQ2              	100.00%		B4KT43              	100.00%
Bootstrap support for A8HSQ2 as seed ortholog is 100%.
Bootstrap support for B4KT43 as seed ortholog is 100%.

Group of orthologs #81. Best score 721 bits
Score difference with first non-orthologous sequence - C.reinhardtii:721 D.mojavensis:721

A8IAC7              	100.00%		B4KZK5              	100.00%
Bootstrap support for A8IAC7 as seed ortholog is 100%.
Bootstrap support for B4KZK5 as seed ortholog is 100%.

Group of orthologs #82. Best score 716 bits
Score difference with first non-orthologous sequence - C.reinhardtii:716 D.mojavensis:716

A8JDQ4              	100.00%		B4KHX2              	100.00%
Bootstrap support for A8JDQ4 as seed ortholog is 100%.
Bootstrap support for B4KHX2 as seed ortholog is 100%.

Group of orthologs #83. Best score 705 bits
Score difference with first non-orthologous sequence - C.reinhardtii:705 D.mojavensis:314

A8ICJ1              	100.00%		B4KL74              	100.00%
Bootstrap support for A8ICJ1 as seed ortholog is 100%.
Bootstrap support for B4KL74 as seed ortholog is 100%.

Group of orthologs #84. Best score 704 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 D.mojavensis:175

A8JAV1              	100.00%		B4KSC6              	100.00%
                    	       		B4L1G6              	94.83%
                    	       		B4KAA1              	70.69%
                    	       		B4KQM1              	67.24%
                    	       		B4KAD4              	55.17%
                    	       		B4L011              	51.72%
Bootstrap support for A8JAV1 as seed ortholog is 100%.
Bootstrap support for B4KSC6 as seed ortholog is 100%.

Group of orthologs #85. Best score 704 bits
Score difference with first non-orthologous sequence - C.reinhardtii:704 D.mojavensis:704

A8IUN1              	100.00%		B4KRA1              	100.00%
Bootstrap support for A8IUN1 as seed ortholog is 100%.
Bootstrap support for B4KRA1 as seed ortholog is 100%.

Group of orthologs #86. Best score 698 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 D.mojavensis:310

A8IHB3              	100.00%		B4K736              	100.00%
Bootstrap support for A8IHB3 as seed ortholog is 100%.
Bootstrap support for B4K736 as seed ortholog is 100%.

Group of orthologs #87. Best score 696 bits
Score difference with first non-orthologous sequence - C.reinhardtii:469 D.mojavensis:696

A8IRW5              	100.00%		B4L1Z6              	100.00%
Bootstrap support for A8IRW5 as seed ortholog is 100%.
Bootstrap support for B4L1Z6 as seed ortholog is 100%.

Group of orthologs #88. Best score 693 bits
Score difference with first non-orthologous sequence - C.reinhardtii:611 D.mojavensis:693

A8IIP9              	100.00%		B4KC16              	100.00%
                    	       		B4L877              	61.20%
Bootstrap support for A8IIP9 as seed ortholog is 100%.
Bootstrap support for B4KC16 as seed ortholog is 100%.

Group of orthologs #89. Best score 693 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 D.mojavensis:693

A8J189              	100.00%		B4KIX3              	100.00%
Bootstrap support for A8J189 as seed ortholog is 100%.
Bootstrap support for B4KIX3 as seed ortholog is 100%.

Group of orthologs #90. Best score 691 bits
Score difference with first non-orthologous sequence - C.reinhardtii:597 D.mojavensis:691

A8HQ74              	100.00%		B4KDM5              	100.00%
Bootstrap support for A8HQ74 as seed ortholog is 100%.
Bootstrap support for B4KDM5 as seed ortholog is 100%.

Group of orthologs #91. Best score 691 bits
Score difference with first non-orthologous sequence - C.reinhardtii:691 D.mojavensis:162

A8I4J0              	100.00%		B4KIM7              	100.00%
Bootstrap support for A8I4J0 as seed ortholog is 100%.
Bootstrap support for B4KIM7 as seed ortholog is 96%.

Group of orthologs #92. Best score 686 bits
Score difference with first non-orthologous sequence - C.reinhardtii:686 D.mojavensis:686

A8I8N8              	100.00%		B4KQI1              	100.00%
Bootstrap support for A8I8N8 as seed ortholog is 100%.
Bootstrap support for B4KQI1 as seed ortholog is 100%.

Group of orthologs #93. Best score 685 bits
Score difference with first non-orthologous sequence - C.reinhardtii:608 D.mojavensis:685

A8J7J2              	100.00%		B4KMN2              	100.00%
Bootstrap support for A8J7J2 as seed ortholog is 100%.
Bootstrap support for B4KMN2 as seed ortholog is 100%.

Group of orthologs #94. Best score 684 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:290

A8J0R6              	100.00%		B4KE83              	100.00%
Bootstrap support for A8J0R6 as seed ortholog is 99%.
Bootstrap support for B4KE83 as seed ortholog is 100%.

Group of orthologs #95. Best score 684 bits
Score difference with first non-orthologous sequence - C.reinhardtii:684 D.mojavensis:304

A8J3N3              	100.00%		B4L2J1              	100.00%
Bootstrap support for A8J3N3 as seed ortholog is 100%.
Bootstrap support for B4L2J1 as seed ortholog is 100%.

Group of orthologs #96. Best score 681 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 D.mojavensis:631

A8J7C8              	100.00%		B4L2V7              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 100%.
Bootstrap support for B4L2V7 as seed ortholog is 100%.

Group of orthologs #97. Best score 681 bits
Score difference with first non-orthologous sequence - C.reinhardtii:614 D.mojavensis:681

A8J6M3              	100.00%		B4L687              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 100%.
Bootstrap support for B4L687 as seed ortholog is 100%.

Group of orthologs #98. Best score 679 bits
Score difference with first non-orthologous sequence - C.reinhardtii:679 D.mojavensis:679

A8II71              	100.00%		B4KZP0              	100.00%
Bootstrap support for A8II71 as seed ortholog is 100%.
Bootstrap support for B4KZP0 as seed ortholog is 100%.

Group of orthologs #99. Best score 678 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 D.mojavensis:678

A8II42              	100.00%		B4KAH9              	100.00%
Bootstrap support for A8II42 as seed ortholog is 100%.
Bootstrap support for B4KAH9 as seed ortholog is 100%.

Group of orthologs #100. Best score 673 bits
Score difference with first non-orthologous sequence - C.reinhardtii:673 D.mojavensis:673

A8JH46              	100.00%		B4KNH7              	100.00%
Bootstrap support for A8JH46 as seed ortholog is 100%.
Bootstrap support for B4KNH7 as seed ortholog is 100%.

Group of orthologs #101. Best score 658 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 D.mojavensis:658

A8IDJ7              	100.00%		B4KHL3              	100.00%
Bootstrap support for A8IDJ7 as seed ortholog is 100%.
Bootstrap support for B4KHL3 as seed ortholog is 100%.

Group of orthologs #102. Best score 658 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:194

A8IU68              	100.00%		B4KUE2              	100.00%
Bootstrap support for A8IU68 as seed ortholog is 83%.
Bootstrap support for B4KUE2 as seed ortholog is 99%.

Group of orthologs #103. Best score 657 bits
Score difference with first non-orthologous sequence - C.reinhardtii:657 D.mojavensis:657

A8J4W8              	100.00%		B4K538              	100.00%
Bootstrap support for A8J4W8 as seed ortholog is 100%.
Bootstrap support for B4K538 as seed ortholog is 100%.

Group of orthologs #104. Best score 657 bits
Score difference with first non-orthologous sequence - C.reinhardtii:578 D.mojavensis:657

A8J524              	100.00%		B4L1N6              	100.00%
Bootstrap support for A8J524 as seed ortholog is 100%.
Bootstrap support for B4L1N6 as seed ortholog is 100%.

Group of orthologs #105. Best score 651 bits
Score difference with first non-orthologous sequence - C.reinhardtii:651 D.mojavensis:651

Q8VZZ5              	100.00%		B4KY20              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for B4KY20 as seed ortholog is 100%.

Group of orthologs #106. Best score 646 bits
Score difference with first non-orthologous sequence - C.reinhardtii:646 D.mojavensis:646

A8JE04              	100.00%		B4KIN7              	100.00%
Bootstrap support for A8JE04 as seed ortholog is 100%.
Bootstrap support for B4KIN7 as seed ortholog is 100%.

Group of orthologs #107. Best score 644 bits
Score difference with first non-orthologous sequence - C.reinhardtii:644 D.mojavensis:644

A8IEL6              	100.00%		B4KKX5              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for B4KKX5 as seed ortholog is 100%.

Group of orthologs #108. Best score 642 bits
Score difference with first non-orthologous sequence - C.reinhardtii:642 D.mojavensis:169

A8J8K0              	100.00%		B4KQ96              	100.00%
Bootstrap support for A8J8K0 as seed ortholog is 100%.
Bootstrap support for B4KQ96 as seed ortholog is 99%.

Group of orthologs #109. Best score 637 bits
Score difference with first non-orthologous sequence - C.reinhardtii:416 D.mojavensis:422

A8JBN7              	100.00%		B4K8T2              	100.00%
Bootstrap support for A8JBN7 as seed ortholog is 100%.
Bootstrap support for B4K8T2 as seed ortholog is 100%.

Group of orthologs #110. Best score 634 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 D.mojavensis:327

A8IIP7              	100.00%		B4K5A8              	100.00%
Bootstrap support for A8IIP7 as seed ortholog is 100%.
Bootstrap support for B4K5A8 as seed ortholog is 100%.

Group of orthologs #111. Best score 634 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 D.mojavensis:327

A8I7H0              	100.00%		B4KLG3              	100.00%
Bootstrap support for A8I7H0 as seed ortholog is 99%.
Bootstrap support for B4KLG3 as seed ortholog is 100%.

Group of orthologs #112. Best score 631 bits
Score difference with first non-orthologous sequence - C.reinhardtii:631 D.mojavensis:631

A8J014              	100.00%		B4L2D4              	100.00%
                    	       		B4KU96              	9.25%
Bootstrap support for A8J014 as seed ortholog is 100%.
Bootstrap support for B4L2D4 as seed ortholog is 100%.

Group of orthologs #113. Best score 631 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 D.mojavensis:31

A8IIL1              	100.00%		B4KIW7              	100.00%
Bootstrap support for A8IIL1 as seed ortholog is 99%.
Bootstrap support for B4KIW7 as seed ortholog is 73%.
Alternative seed ortholog is B4KJ02 (31 bits away from this cluster)

Group of orthologs #114. Best score 631 bits
Score difference with first non-orthologous sequence - C.reinhardtii:631 D.mojavensis:631

A8IDE6              	100.00%		B4KNC9              	100.00%
Bootstrap support for A8IDE6 as seed ortholog is 100%.
Bootstrap support for B4KNC9 as seed ortholog is 100%.

Group of orthologs #115. Best score 631 bits
Score difference with first non-orthologous sequence - C.reinhardtii:631 D.mojavensis:631

A8JHE3              	100.00%		B4L9P2              	100.00%
Bootstrap support for A8JHE3 as seed ortholog is 100%.
Bootstrap support for B4L9P2 as seed ortholog is 100%.

Group of orthologs #116. Best score 629 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:227

A8JF90              	100.00%		B4L5N3              	100.00%
A8JF89              	35.47%		B4KR67              	9.88%
A8J6D9              	18.35%		
A8JF52              	13.73%		
A8IQ59              	6.73%		
Bootstrap support for A8JF90 as seed ortholog is 89%.
Bootstrap support for B4L5N3 as seed ortholog is 99%.

Group of orthologs #117. Best score 628 bits
Score difference with first non-orthologous sequence - C.reinhardtii:628 D.mojavensis:628

A8IZE7              	100.00%		B4K8P5              	100.00%
                    	       		B4KAX4              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for B4K8P5 as seed ortholog is 100%.
Bootstrap support for B4KAX4 as seed ortholog is 100%.

Group of orthologs #118. Best score 626 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 D.mojavensis:456

A8IRS1              	100.00%		B4KVA3              	100.00%
Bootstrap support for A8IRS1 as seed ortholog is 100%.
Bootstrap support for B4KVA3 as seed ortholog is 100%.

Group of orthologs #119. Best score 625 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 D.mojavensis:284

A8JIU8              	100.00%		B4L6I3              	100.00%
A8IVU6              	21.17%		
Bootstrap support for A8JIU8 as seed ortholog is 37%.
Alternative seed ortholog is A8IHW3 (31 bits away from this cluster)
Bootstrap support for B4L6I3 as seed ortholog is 99%.

Group of orthologs #120. Best score 622 bits
Score difference with first non-orthologous sequence - C.reinhardtii:537 D.mojavensis:536

A8HPU4              	100.00%		B4K8N7              	100.00%
Bootstrap support for A8HPU4 as seed ortholog is 100%.
Bootstrap support for B4K8N7 as seed ortholog is 100%.

Group of orthologs #121. Best score 619 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 D.mojavensis:619

A8HVM3              	100.00%		B4KJL1              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 100%.
Bootstrap support for B4KJL1 as seed ortholog is 100%.

Group of orthologs #122. Best score 617 bits
Score difference with first non-orthologous sequence - C.reinhardtii:617 D.mojavensis:617

A8JFA3              	100.00%		B4KC49              	100.00%
Bootstrap support for A8JFA3 as seed ortholog is 100%.
Bootstrap support for B4KC49 as seed ortholog is 100%.

Group of orthologs #123. Best score 616 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 D.mojavensis:312

A8IR41              	100.00%		B4L6T8              	100.00%
                    	       		B4K9M5              	23.93%
Bootstrap support for A8IR41 as seed ortholog is 100%.
Bootstrap support for B4L6T8 as seed ortholog is 100%.

Group of orthologs #124. Best score 613 bits
Score difference with first non-orthologous sequence - C.reinhardtii:613 D.mojavensis:613

A8JG58              	100.00%		B4KXL4              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for B4KXL4 as seed ortholog is 100%.

Group of orthologs #125. Best score 609 bits
Score difference with first non-orthologous sequence - C.reinhardtii:609 D.mojavensis:245

A8IST3              	100.00%		B4K8N3              	100.00%
A8J1K0              	35.57%		B4K928              	25.29%
A8J9X3              	22.16%		B4KG41              	21.94%
                    	       		B4K929              	17.76%
Bootstrap support for A8IST3 as seed ortholog is 100%.
Bootstrap support for B4K8N3 as seed ortholog is 99%.

Group of orthologs #126. Best score 609 bits
Score difference with first non-orthologous sequence - C.reinhardtii:609 D.mojavensis:609

A8IVW3              	100.00%		B4L5L9              	100.00%
Bootstrap support for A8IVW3 as seed ortholog is 100%.
Bootstrap support for B4L5L9 as seed ortholog is 100%.

Group of orthologs #127. Best score 608 bits
Score difference with first non-orthologous sequence - C.reinhardtii:608 D.mojavensis:608

A8IWV0              	100.00%		B4L8Y3              	100.00%
Bootstrap support for A8IWV0 as seed ortholog is 100%.
Bootstrap support for B4L8Y3 as seed ortholog is 100%.

Group of orthologs #128. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:419 D.mojavensis:400

A8IT25              	100.00%		B4KJI4              	100.00%
Bootstrap support for A8IT25 as seed ortholog is 100%.
Bootstrap support for B4KJI4 as seed ortholog is 100%.

Group of orthologs #129. Best score 604 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 D.mojavensis:109

A8HPT4              	100.00%		B4KYE5              	100.00%
Bootstrap support for A8HPT4 as seed ortholog is 99%.
Bootstrap support for B4KYE5 as seed ortholog is 98%.

Group of orthologs #130. Best score 604 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:314

A8JAK4              	100.00%		B4KV35              	100.00%
Bootstrap support for A8JAK4 as seed ortholog is 99%.
Bootstrap support for B4KV35 as seed ortholog is 100%.

Group of orthologs #131. Best score 603 bits
Score difference with first non-orthologous sequence - C.reinhardtii:433 D.mojavensis:364

A8INY3              	100.00%		B4KKF6              	100.00%
                    	       		B4KHL0              	51.41%
Bootstrap support for A8INY3 as seed ortholog is 100%.
Bootstrap support for B4KKF6 as seed ortholog is 100%.

Group of orthologs #132. Best score 601 bits
Score difference with first non-orthologous sequence - C.reinhardtii:601 D.mojavensis:601

A8HYC0              	100.00%		B4KUC1              	100.00%
Bootstrap support for A8HYC0 as seed ortholog is 100%.
Bootstrap support for B4KUC1 as seed ortholog is 100%.

Group of orthologs #133. Best score 600 bits
Score difference with first non-orthologous sequence - C.reinhardtii:600 D.mojavensis:600

A8IXY4              	100.00%		B4KHP4              	100.00%
A8IYW8              	72.11%		
Bootstrap support for A8IXY4 as seed ortholog is 100%.
Bootstrap support for B4KHP4 as seed ortholog is 100%.

Group of orthologs #134. Best score 591 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 D.mojavensis:182

A8IBY2              	100.00%		B4KCP5              	100.00%
Bootstrap support for A8IBY2 as seed ortholog is 100%.
Bootstrap support for B4KCP5 as seed ortholog is 99%.

Group of orthologs #135. Best score 591 bits
Score difference with first non-orthologous sequence - C.reinhardtii:591 D.mojavensis:479

A8JH25              	100.00%		B4KMC9              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 100%.
Bootstrap support for B4KMC9 as seed ortholog is 100%.

Group of orthologs #136. Best score 589 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 D.mojavensis:589

A8IDL8              	100.00%		B4L5X6              	100.00%
Bootstrap support for A8IDL8 as seed ortholog is 100%.
Bootstrap support for B4L5X6 as seed ortholog is 100%.

Group of orthologs #137. Best score 589 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 D.mojavensis:589

A8J829              	100.00%		B4L6R5              	100.00%
Bootstrap support for A8J829 as seed ortholog is 68%.
Alternative seed ortholog is A8JBB5 (24 bits away from this cluster)
Bootstrap support for B4L6R5 as seed ortholog is 100%.

Group of orthologs #138. Best score 587 bits
Score difference with first non-orthologous sequence - C.reinhardtii:513 D.mojavensis:587

A8J709              	100.00%		B4KE78              	100.00%
Bootstrap support for A8J709 as seed ortholog is 100%.
Bootstrap support for B4KE78 as seed ortholog is 100%.

Group of orthologs #139. Best score 586 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:586

A8J914              	100.00%		B4KZU4              	100.00%
A2PZC3              	89.07%		
Bootstrap support for A8J914 as seed ortholog is 99%.
Bootstrap support for B4KZU4 as seed ortholog is 100%.

Group of orthologs #140. Best score 586 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 D.mojavensis:586

A8J979              	100.00%		B4K9J0              	100.00%
Bootstrap support for A8J979 as seed ortholog is 99%.
Bootstrap support for B4K9J0 as seed ortholog is 100%.

Group of orthologs #141. Best score 585 bits
Score difference with first non-orthologous sequence - C.reinhardtii:585 D.mojavensis:585

A8J168              	100.00%		B4L8H4              	100.00%
                    	       		B4L614              	42.21%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for B4L8H4 as seed ortholog is 100%.

Group of orthologs #142. Best score 583 bits
Score difference with first non-orthologous sequence - C.reinhardtii:583 D.mojavensis:583

A8I175              	100.00%		B4KBP3              	100.00%
                    	       		B4L596              	79.37%
Bootstrap support for A8I175 as seed ortholog is 100%.
Bootstrap support for B4KBP3 as seed ortholog is 100%.

Group of orthologs #143. Best score 583 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 D.mojavensis:371

A8J3L9              	100.00%		B4L668              	100.00%
Bootstrap support for A8J3L9 as seed ortholog is 100%.
Bootstrap support for B4L668 as seed ortholog is 100%.

Group of orthologs #144. Best score 582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:61

A8IHD9              	100.00%		B4KKG2              	100.00%
                    	       		B4KT85              	18.86%
                    	       		B4KNE3              	7.58%
Bootstrap support for A8IHD9 as seed ortholog is 95%.
Bootstrap support for B4KKG2 as seed ortholog is 88%.

Group of orthologs #145. Best score 582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:330 D.mojavensis:175

A8JC09              	100.00%		B4L701              	100.00%
Bootstrap support for A8JC09 as seed ortholog is 100%.
Bootstrap support for B4L701 as seed ortholog is 99%.

Group of orthologs #146. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 D.mojavensis:577

A8J4D9              	100.00%		B4KFH2              	100.00%
Bootstrap support for A8J4D9 as seed ortholog is 100%.
Bootstrap support for B4KFH2 as seed ortholog is 100%.

Group of orthologs #147. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 D.mojavensis:577

A8J0X7              	100.00%		B4KJS4              	100.00%
Bootstrap support for A8J0X7 as seed ortholog is 100%.
Bootstrap support for B4KJS4 as seed ortholog is 100%.

Group of orthologs #148. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 D.mojavensis:577

A8J6S4              	100.00%		B4KYN4              	100.00%
Bootstrap support for A8J6S4 as seed ortholog is 100%.
Bootstrap support for B4KYN4 as seed ortholog is 100%.

Group of orthologs #149. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 D.mojavensis:577

A8J3N8              	100.00%		B4L3F0              	100.00%
Bootstrap support for A8J3N8 as seed ortholog is 100%.
Bootstrap support for B4L3F0 as seed ortholog is 100%.

Group of orthologs #150. Best score 576 bits
Score difference with first non-orthologous sequence - C.reinhardtii:576 D.mojavensis:576

A8IED9              	100.00%		B4KM31              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for B4KM31 as seed ortholog is 100%.

Group of orthologs #151. Best score 575 bits
Score difference with first non-orthologous sequence - C.reinhardtii:575 D.mojavensis:575

A8I0Z4              	100.00%		B4KTH4              	100.00%
Bootstrap support for A8I0Z4 as seed ortholog is 100%.
Bootstrap support for B4KTH4 as seed ortholog is 100%.

Group of orthologs #152. Best score 574 bits
Score difference with first non-orthologous sequence - C.reinhardtii:574 D.mojavensis:574

A8IGM5              	100.00%		B4L7J5              	100.00%
Bootstrap support for A8IGM5 as seed ortholog is 100%.
Bootstrap support for B4L7J5 as seed ortholog is 100%.

Group of orthologs #153. Best score 573 bits
Score difference with first non-orthologous sequence - C.reinhardtii:573 D.mojavensis:573

Q6V9A8              	100.00%		B4L7B6              	100.00%
                    	       		B4KBY0              	9.83%
Bootstrap support for Q6V9A8 as seed ortholog is 100%.
Bootstrap support for B4L7B6 as seed ortholog is 100%.

Group of orthologs #154. Best score 571 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 D.mojavensis:442

A8IJV9              	100.00%		B4L7A9              	100.00%
A8IZL7              	44.73%		
A8IS11              	38.59%		
A8J0V2              	33.22%		
Bootstrap support for A8IJV9 as seed ortholog is 99%.
Bootstrap support for B4L7A9 as seed ortholog is 100%.

Group of orthologs #155. Best score 568 bits
Score difference with first non-orthologous sequence - C.reinhardtii:568 D.mojavensis:568

A8J2Q6              	100.00%		B4KAF5              	100.00%
Bootstrap support for A8J2Q6 as seed ortholog is 100%.
Bootstrap support for B4KAF5 as seed ortholog is 100%.

Group of orthologs #156. Best score 567 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 D.mojavensis:43

A8IJ19              	100.00%		B4KIP9              	100.00%
                    	       		B4KGQ4              	43.58%
                    	       		B4KGQ5              	42.32%
Bootstrap support for A8IJ19 as seed ortholog is 100%.
Bootstrap support for B4KIP9 as seed ortholog is 84%.

Group of orthologs #157. Best score 565 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 D.mojavensis:280

A8IWA5              	100.00%		B4KK23              	100.00%
Bootstrap support for A8IWA5 as seed ortholog is 100%.
Bootstrap support for B4KK23 as seed ortholog is 100%.

Group of orthologs #158. Best score 564 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 D.mojavensis:472

A8JFR4              	100.00%		B4KZA9              	100.00%
Bootstrap support for A8JFR4 as seed ortholog is 100%.
Bootstrap support for B4KZA9 as seed ortholog is 100%.

Group of orthologs #159. Best score 563 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 D.mojavensis:563

A8JHC9              	100.00%		B4L2G7              	100.00%
Bootstrap support for A8JHC9 as seed ortholog is 100%.
Bootstrap support for B4L2G7 as seed ortholog is 100%.

Group of orthologs #160. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:180

A8HQA8              	100.00%		B4KB00              	100.00%
                    	       		B4KXY6              	17.01%
                    	       		B4KZU0              	7.14%
Bootstrap support for A8HQA8 as seed ortholog is 99%.
Bootstrap support for B4KB00 as seed ortholog is 99%.

Group of orthologs #161. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:560 D.mojavensis:560

A8HZ26              	100.00%		B4L846              	100.00%
Bootstrap support for A8HZ26 as seed ortholog is 100%.
Bootstrap support for B4L846 as seed ortholog is 100%.

Group of orthologs #162. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:560 D.mojavensis:560

A8JH98              	100.00%		B4KKU1              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for B4KKU1 as seed ortholog is 100%.

Group of orthologs #163. Best score 558 bits
Score difference with first non-orthologous sequence - C.reinhardtii:558 D.mojavensis:558

A8J8Z1              	100.00%		B4L9P4              	100.00%
Bootstrap support for A8J8Z1 as seed ortholog is 100%.
Bootstrap support for B4L9P4 as seed ortholog is 100%.

Group of orthologs #164. Best score 555 bits
Score difference with first non-orthologous sequence - C.reinhardtii:555 D.mojavensis:361

A8HXA2              	100.00%		B4K659              	100.00%
Bootstrap support for A8HXA2 as seed ortholog is 100%.
Bootstrap support for B4K659 as seed ortholog is 100%.

Group of orthologs #165. Best score 554 bits
Score difference with first non-orthologous sequence - C.reinhardtii:464 D.mojavensis:554

A8J4L1              	100.00%		B4KVN7              	100.00%
Bootstrap support for A8J4L1 as seed ortholog is 100%.
Bootstrap support for B4KVN7 as seed ortholog is 100%.

Group of orthologs #166. Best score 552 bits
Score difference with first non-orthologous sequence - C.reinhardtii:552 D.mojavensis:496

A8J5R1              	100.00%		B4K6A3              	100.00%
Bootstrap support for A8J5R1 as seed ortholog is 100%.
Bootstrap support for B4K6A3 as seed ortholog is 100%.

Group of orthologs #167. Best score 551 bits
Score difference with first non-orthologous sequence - C.reinhardtii:551 D.mojavensis:551

A8J9S7              	100.00%		B4KYD2              	100.00%
Bootstrap support for A8J9S7 as seed ortholog is 100%.
Bootstrap support for B4KYD2 as seed ortholog is 100%.

Group of orthologs #168. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 D.mojavensis:550

A8I0G3              	100.00%		B4KZG3              	100.00%
Bootstrap support for A8I0G3 as seed ortholog is 100%.
Bootstrap support for B4KZG3 as seed ortholog is 100%.

Group of orthologs #169. Best score 549 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 D.mojavensis:117

A8JFG3              	100.00%		B4KXE2              	100.00%
A7LGV1              	11.25%		
Bootstrap support for A8JFG3 as seed ortholog is 100%.
Bootstrap support for B4KXE2 as seed ortholog is 98%.

Group of orthologs #170. Best score 549 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 D.mojavensis:360

A8IA39              	100.00%		B4KKD5              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for B4KKD5 as seed ortholog is 100%.

Group of orthologs #171. Best score 548 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 D.mojavensis:348

A8IP17              	100.00%		B4KGG3              	100.00%
Bootstrap support for A8IP17 as seed ortholog is 100%.
Bootstrap support for B4KGG3 as seed ortholog is 100%.

Group of orthologs #172. Best score 547 bits
Score difference with first non-orthologous sequence - C.reinhardtii:547 D.mojavensis:195

A8IFS3              	100.00%		B4L9B2              	100.00%
Bootstrap support for A8IFS3 as seed ortholog is 100%.
Bootstrap support for B4L9B2 as seed ortholog is 99%.

Group of orthologs #173. Best score 547 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 D.mojavensis:439

P26526              	100.00%		B4KPB8              	100.00%
Bootstrap support for P26526 as seed ortholog is 100%.
Bootstrap support for B4KPB8 as seed ortholog is 100%.

Group of orthologs #174. Best score 543 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 D.mojavensis:452

A8HPZ4              	100.00%		B4KC98              	100.00%
Bootstrap support for A8HPZ4 as seed ortholog is 100%.
Bootstrap support for B4KC98 as seed ortholog is 100%.

Group of orthologs #175. Best score 543 bits
Score difference with first non-orthologous sequence - C.reinhardtii:543 D.mojavensis:543

A8I8X8              	100.00%		B4KQQ6              	100.00%
Bootstrap support for A8I8X8 as seed ortholog is 100%.
Bootstrap support for B4KQQ6 as seed ortholog is 100%.

Group of orthologs #176. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:540 D.mojavensis:540

A8I9M8              	100.00%		B4KLR2              	100.00%
Bootstrap support for A8I9M8 as seed ortholog is 100%.
Bootstrap support for B4KLR2 as seed ortholog is 100%.

Group of orthologs #177. Best score 537 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:537

A8IMK1              	100.00%		B4L651              	100.00%
                    	       		B4KGJ9              	65.47%
                    	       		B4KFJ8              	30.94%
Bootstrap support for A8IMK1 as seed ortholog is 92%.
Bootstrap support for B4L651 as seed ortholog is 100%.

Group of orthologs #178. Best score 537 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:254

A8IJV1              	100.00%		B4KGP2              	100.00%
Bootstrap support for A8IJV1 as seed ortholog is 100%.
Bootstrap support for B4KGP2 as seed ortholog is 100%.

Group of orthologs #179. Best score 535 bits
Score difference with first non-orthologous sequence - C.reinhardtii:535 D.mojavensis:186

A8HPT8              	100.00%		B4L5X8              	100.00%
                    	       		B4L5X9              	46.07%
                    	       		B4KV43              	37.08%
Bootstrap support for A8HPT8 as seed ortholog is 100%.
Bootstrap support for B4L5X8 as seed ortholog is 100%.

Group of orthologs #180. Best score 535 bits
Score difference with first non-orthologous sequence - C.reinhardtii:355 D.mojavensis:366

A8JIJ1              	100.00%		B4KF36              	100.00%
Bootstrap support for A8JIJ1 as seed ortholog is 100%.
Bootstrap support for B4KF36 as seed ortholog is 100%.

Group of orthologs #181. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:406 D.mojavensis:534

Q6VTH1              	100.00%		B4K5Q9              	100.00%
A8II54              	7.71%		
Bootstrap support for Q6VTH1 as seed ortholog is 100%.
Bootstrap support for B4K5Q9 as seed ortholog is 100%.

Group of orthologs #182. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:534 D.mojavensis:534

A8I8V5              	100.00%		B4KMR8              	100.00%
Bootstrap support for A8I8V5 as seed ortholog is 100%.
Bootstrap support for B4KMR8 as seed ortholog is 100%.

Group of orthologs #183. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:534 D.mojavensis:534

A8ID74              	100.00%		B4KQU8              	100.00%
Bootstrap support for A8ID74 as seed ortholog is 100%.
Bootstrap support for B4KQU8 as seed ortholog is 100%.

Group of orthologs #184. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 D.mojavensis:532

A8IPH5              	100.00%		B4L7T3              	100.00%
Bootstrap support for A8IPH5 as seed ortholog is 100%.
Bootstrap support for B4L7T3 as seed ortholog is 100%.

Group of orthologs #185. Best score 531 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 D.mojavensis:531

A8J1T4              	100.00%		B4L0F4              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 100%.
Bootstrap support for B4L0F4 as seed ortholog is 100%.

Group of orthologs #186. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:530 D.mojavensis:530

A8J9E6              	100.00%		B4KID0              	100.00%
Bootstrap support for A8J9E6 as seed ortholog is 100%.
Bootstrap support for B4KID0 as seed ortholog is 100%.

Group of orthologs #187. Best score 528 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 D.mojavensis:72

Q9XGU3              	100.00%		B4K877              	100.00%
                    	       		B4K9Y3              	83.84%
                    	       		B4L2I9              	64.65%
                    	       		B4L2E9              	11.11%
Bootstrap support for Q9XGU3 as seed ortholog is 100%.
Bootstrap support for B4K877 as seed ortholog is 99%.

Group of orthologs #188. Best score 528 bits
Score difference with first non-orthologous sequence - C.reinhardtii:528 D.mojavensis:528

A8J5K4              	100.00%		B4K5D0              	100.00%
Bootstrap support for A8J5K4 as seed ortholog is 100%.
Bootstrap support for B4K5D0 as seed ortholog is 100%.

Group of orthologs #189. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:527 D.mojavensis:527

Q8W4V3              	100.00%		B4L1H0              	100.00%
A8J4R9              	12.23%		
Bootstrap support for Q8W4V3 as seed ortholog is 100%.
Bootstrap support for B4L1H0 as seed ortholog is 100%.

Group of orthologs #190. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 D.mojavensis:275

A8I675              	100.00%		B4K6L4              	100.00%
Bootstrap support for A8I675 as seed ortholog is 100%.
Bootstrap support for B4K6L4 as seed ortholog is 100%.

Group of orthologs #191. Best score 526 bits
Score difference with first non-orthologous sequence - C.reinhardtii:526 D.mojavensis:324

A8IHM8              	100.00%		B4K8U4              	100.00%
Bootstrap support for A8IHM8 as seed ortholog is 100%.
Bootstrap support for B4K8U4 as seed ortholog is 100%.

Group of orthologs #192. Best score 526 bits
Score difference with first non-orthologous sequence - C.reinhardtii:447 D.mojavensis:357

A8JGK6              	100.00%		B4K8L8              	100.00%
Bootstrap support for A8JGK6 as seed ortholog is 100%.
Bootstrap support for B4K8L8 as seed ortholog is 100%.

Group of orthologs #193. Best score 525 bits
Score difference with first non-orthologous sequence - C.reinhardtii:525 D.mojavensis:525

A8HYH7              	100.00%		B4KPU6              	100.00%
Bootstrap support for A8HYH7 as seed ortholog is 100%.
Bootstrap support for B4KPU6 as seed ortholog is 100%.

Group of orthologs #194. Best score 524 bits
Score difference with first non-orthologous sequence - C.reinhardtii:469 D.mojavensis:524

A8IF08              	100.00%		B4KTQ8              	100.00%
Bootstrap support for A8IF08 as seed ortholog is 100%.
Bootstrap support for B4KTQ8 as seed ortholog is 100%.

Group of orthologs #195. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:520

A8IE89              	100.00%		B4L5D7              	100.00%
Bootstrap support for A8IE89 as seed ortholog is 99%.
Bootstrap support for B4L5D7 as seed ortholog is 100%.

Group of orthologs #196. Best score 515 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 D.mojavensis:117

A8HQY2              	100.00%		B4L4N6              	100.00%
Bootstrap support for A8HQY2 as seed ortholog is 100%.
Bootstrap support for B4L4N6 as seed ortholog is 98%.

Group of orthologs #197. Best score 515 bits
Score difference with first non-orthologous sequence - C.reinhardtii:469 D.mojavensis:515

A8J5Y9              	100.00%		B4KVQ8              	100.00%
Bootstrap support for A8J5Y9 as seed ortholog is 100%.
Bootstrap support for B4KVQ8 as seed ortholog is 100%.

Group of orthologs #198. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:514 D.mojavensis:514

A8ISE2              	100.00%		B4K5P5              	100.00%
Bootstrap support for A8ISE2 as seed ortholog is 100%.
Bootstrap support for B4K5P5 as seed ortholog is 100%.

Group of orthologs #199. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 D.mojavensis:201

A8J8W0              	100.00%		B4KIZ1              	100.00%
Bootstrap support for A8J8W0 as seed ortholog is 100%.
Bootstrap support for B4KIZ1 as seed ortholog is 99%.

Group of orthologs #200. Best score 512 bits
Score difference with first non-orthologous sequence - C.reinhardtii:512 D.mojavensis:464

A8HQI5              	100.00%		B4KFB6              	100.00%
Bootstrap support for A8HQI5 as seed ortholog is 100%.
Bootstrap support for B4KFB6 as seed ortholog is 100%.

Group of orthologs #201. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:510 D.mojavensis:510

A8ITN7              	100.00%		B4KCM2              	100.00%
Bootstrap support for A8ITN7 as seed ortholog is 100%.
Bootstrap support for B4KCM2 as seed ortholog is 100%.

Group of orthologs #202. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 D.mojavensis:83

A8J9Q1              	100.00%		B4L0X8              	100.00%
Bootstrap support for A8J9Q1 as seed ortholog is 100%.
Bootstrap support for B4L0X8 as seed ortholog is 96%.

Group of orthologs #203. Best score 508 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 D.mojavensis:508

A8HS79              	100.00%		B4KX01              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 100%.
Bootstrap support for B4KX01 as seed ortholog is 100%.

Group of orthologs #204. Best score 508 bits
Score difference with first non-orthologous sequence - C.reinhardtii:508 D.mojavensis:96

A8IXE0              	100.00%		B4L1T2              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for B4L1T2 as seed ortholog is 97%.

Group of orthologs #205. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 D.mojavensis:507

A8J3G7              	100.00%		B4KX99              	100.00%
                    	       		B4KD95              	5.57%
Bootstrap support for A8J3G7 as seed ortholog is 78%.
Bootstrap support for B4KX99 as seed ortholog is 100%.

Group of orthologs #206. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 D.mojavensis:507

A8I793              	100.00%		B4KFJ3              	100.00%
Bootstrap support for A8I793 as seed ortholog is 100%.
Bootstrap support for B4KFJ3 as seed ortholog is 100%.

Group of orthologs #207. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:507 D.mojavensis:325

A8IDM1              	100.00%		B4L533              	100.00%
Bootstrap support for A8IDM1 as seed ortholog is 100%.
Bootstrap support for B4L533 as seed ortholog is 100%.

Group of orthologs #208. Best score 506 bits
Score difference with first non-orthologous sequence - C.reinhardtii:506 D.mojavensis:506

A8HTR3              	100.00%		B4L3C3              	100.00%
Bootstrap support for A8HTR3 as seed ortholog is 100%.
Bootstrap support for B4L3C3 as seed ortholog is 100%.

Group of orthologs #209. Best score 506 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:226

A8JBP0              	100.00%		B4KHW9              	100.00%
Bootstrap support for A8JBP0 as seed ortholog is 100%.
Bootstrap support for B4KHW9 as seed ortholog is 100%.

Group of orthologs #210. Best score 504 bits
Score difference with first non-orthologous sequence - C.reinhardtii:504 D.mojavensis:381

A8J146              	100.00%		B4KI70              	100.00%
Bootstrap support for A8J146 as seed ortholog is 100%.
Bootstrap support for B4KI70 as seed ortholog is 100%.

Group of orthologs #211. Best score 503 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 D.mojavensis:359

A8J1X8              	100.00%		B4KRH1              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 100%.
Bootstrap support for B4KRH1 as seed ortholog is 100%.

Group of orthologs #212. Best score 501 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 D.mojavensis:220

A8JDN1              	100.00%		B4L661              	100.00%
Bootstrap support for A8JDN1 as seed ortholog is 100%.
Bootstrap support for B4L661 as seed ortholog is 100%.

Group of orthologs #213. Best score 500 bits
Score difference with first non-orthologous sequence - C.reinhardtii:392 D.mojavensis:500

A8HPY4              	100.00%		B4KRM5              	100.00%
Bootstrap support for A8HPY4 as seed ortholog is 100%.
Bootstrap support for B4KRM5 as seed ortholog is 100%.

Group of orthologs #214. Best score 499 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 D.mojavensis:499

A8J448              	100.00%		B4L1Y5              	100.00%
                    	       		B4KX39              	37.11%
Bootstrap support for A8J448 as seed ortholog is 100%.
Bootstrap support for B4L1Y5 as seed ortholog is 100%.

Group of orthologs #215. Best score 498 bits
Score difference with first non-orthologous sequence - C.reinhardtii:498 D.mojavensis:498

A8ID84              	100.00%		B4KD01              	100.00%
Bootstrap support for A8ID84 as seed ortholog is 100%.
Bootstrap support for B4KD01 as seed ortholog is 100%.

Group of orthologs #216. Best score 497 bits
Score difference with first non-orthologous sequence - C.reinhardtii:497 D.mojavensis:242

A8HS05              	100.00%		B4KCD1              	100.00%
                    	       		B4KBA5              	8.20%
Bootstrap support for A8HS05 as seed ortholog is 100%.
Bootstrap support for B4KCD1 as seed ortholog is 100%.

Group of orthologs #217. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:495 D.mojavensis:495

A8J5U1              	100.00%		B4K622              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for B4K622 as seed ortholog is 100%.

Group of orthologs #218. Best score 493 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 D.mojavensis:364

A8HME6              	100.00%		B4KPT3              	100.00%
Bootstrap support for A8HME6 as seed ortholog is 100%.
Bootstrap support for B4KPT3 as seed ortholog is 100%.

Group of orthologs #219. Best score 492 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:358

A8JF80              	100.00%		B4K4F5              	100.00%
Bootstrap support for A8JF80 as seed ortholog is 99%.
Bootstrap support for B4K4F5 as seed ortholog is 100%.

Group of orthologs #220. Best score 491 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 D.mojavensis:491

A8HM38              	100.00%		B4KRZ1              	100.00%
Bootstrap support for A8HM38 as seed ortholog is 100%.
Bootstrap support for B4KRZ1 as seed ortholog is 100%.

Group of orthologs #221. Best score 490 bits
Score difference with first non-orthologous sequence - C.reinhardtii:490 D.mojavensis:490

A8JCR1              	100.00%		B4K5C6              	100.00%
Bootstrap support for A8JCR1 as seed ortholog is 100%.
Bootstrap support for B4K5C6 as seed ortholog is 100%.

Group of orthologs #222. Best score 490 bits
Score difference with first non-orthologous sequence - C.reinhardtii:490 D.mojavensis:490

A8HNH0              	100.00%		B4L6X1              	100.00%
Bootstrap support for A8HNH0 as seed ortholog is 100%.
Bootstrap support for B4L6X1 as seed ortholog is 100%.

Group of orthologs #223. Best score 487 bits
Score difference with first non-orthologous sequence - C.reinhardtii:487 D.mojavensis:487

A8IID0              	100.00%		B4KJW5              	100.00%
Bootstrap support for A8IID0 as seed ortholog is 100%.
Bootstrap support for B4KJW5 as seed ortholog is 100%.

Group of orthologs #224. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 D.mojavensis:354

A8I9J2              	100.00%		B4L7G4              	100.00%
Bootstrap support for A8I9J2 as seed ortholog is 100%.
Bootstrap support for B4L7G4 as seed ortholog is 100%.

Group of orthologs #225. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 D.mojavensis:411

A8JH72              	100.00%		B4KYJ3              	100.00%
Bootstrap support for A8JH72 as seed ortholog is 100%.
Bootstrap support for B4KYJ3 as seed ortholog is 100%.

Group of orthologs #226. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:483 D.mojavensis:483

A8JA42              	100.00%		B4KB85              	100.00%
Bootstrap support for A8JA42 as seed ortholog is 100%.
Bootstrap support for B4KB85 as seed ortholog is 100%.

Group of orthologs #227. Best score 481 bits
Score difference with first non-orthologous sequence - C.reinhardtii:481 D.mojavensis:481

A8I093              	100.00%		B4KQ62              	100.00%
Bootstrap support for A8I093 as seed ortholog is 100%.
Bootstrap support for B4KQ62 as seed ortholog is 100%.

Group of orthologs #228. Best score 481 bits
Score difference with first non-orthologous sequence - C.reinhardtii:481 D.mojavensis:408

A8I7S0              	100.00%		B4KWS1              	100.00%
Bootstrap support for A8I7S0 as seed ortholog is 100%.
Bootstrap support for B4KWS1 as seed ortholog is 100%.

Group of orthologs #229. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 D.mojavensis:372

A8J280              	100.00%		B4KJ37              	100.00%
Bootstrap support for A8J280 as seed ortholog is 100%.
Bootstrap support for B4KJ37 as seed ortholog is 100%.

Group of orthologs #230. Best score 479 bits
Score difference with first non-orthologous sequence - C.reinhardtii:479 D.mojavensis:343

A8IIS1              	100.00%		B4KD74              	100.00%
Bootstrap support for A8IIS1 as seed ortholog is 100%.
Bootstrap support for B4KD74 as seed ortholog is 100%.

Group of orthologs #231. Best score 479 bits
Score difference with first non-orthologous sequence - C.reinhardtii:393 D.mojavensis:350

A8J5D5              	100.00%		B4KFJ1              	100.00%
Bootstrap support for A8J5D5 as seed ortholog is 100%.
Bootstrap support for B4KFJ1 as seed ortholog is 100%.

Group of orthologs #232. Best score 478 bits
Score difference with first non-orthologous sequence - C.reinhardtii:478 D.mojavensis:313

A8IA86              	100.00%		B4KPH5              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for B4KPH5 as seed ortholog is 100%.

Group of orthologs #233. Best score 477 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:291

A8IBD5              	100.00%		B4KHL5              	100.00%
Bootstrap support for A8IBD5 as seed ortholog is 99%.
Bootstrap support for B4KHL5 as seed ortholog is 100%.

Group of orthologs #234. Best score 475 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 D.mojavensis:292

A8I6G3              	100.00%		B4KQ97              	100.00%
Bootstrap support for A8I6G3 as seed ortholog is 99%.
Bootstrap support for B4KQ97 as seed ortholog is 100%.

Group of orthologs #235. Best score 473 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 D.mojavensis:196

A8IPE0              	100.00%		B4KZ54              	100.00%
Bootstrap support for A8IPE0 as seed ortholog is 100%.
Bootstrap support for B4KZ54 as seed ortholog is 100%.

Group of orthologs #236. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:472 D.mojavensis:176

A8J1D2              	100.00%		B4KYZ2              	100.00%
Bootstrap support for A8J1D2 as seed ortholog is 100%.
Bootstrap support for B4KYZ2 as seed ortholog is 99%.

Group of orthologs #237. Best score 471 bits
Score difference with first non-orthologous sequence - C.reinhardtii:471 D.mojavensis:471

A8IRU2              	100.00%		B4L2Q3              	100.00%
Bootstrap support for A8IRU2 as seed ortholog is 100%.
Bootstrap support for B4L2Q3 as seed ortholog is 100%.

Group of orthologs #238. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 D.mojavensis:470

A8J6K6              	100.00%		B4KL37              	100.00%
Bootstrap support for A8J6K6 as seed ortholog is 99%.
Bootstrap support for B4KL37 as seed ortholog is 100%.

Group of orthologs #239. Best score 469 bits
Score difference with first non-orthologous sequence - C.reinhardtii:469 D.mojavensis:469

A8JEP4              	100.00%		B4L5I4              	100.00%
Bootstrap support for A8JEP4 as seed ortholog is 100%.
Bootstrap support for B4L5I4 as seed ortholog is 100%.

Group of orthologs #240. Best score 468 bits
Score difference with first non-orthologous sequence - C.reinhardtii:468 D.mojavensis:468

A8JG07              	100.00%		B4KUK5              	100.00%
                    	       		B4KUK4              	44.74%
Bootstrap support for A8JG07 as seed ortholog is 100%.
Bootstrap support for B4KUK5 as seed ortholog is 100%.

Group of orthologs #241. Best score 468 bits
Score difference with first non-orthologous sequence - C.reinhardtii:370 D.mojavensis:468

A8IY20              	100.00%		B4K5T5              	100.00%
Bootstrap support for A8IY20 as seed ortholog is 100%.
Bootstrap support for B4K5T5 as seed ortholog is 100%.

Group of orthologs #242. Best score 464 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 D.mojavensis:181

A8J3P5              	100.00%		B4KV58              	100.00%
Bootstrap support for A8J3P5 as seed ortholog is 99%.
Bootstrap support for B4KV58 as seed ortholog is 99%.

Group of orthologs #243. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:463 D.mojavensis:463

A8J7G2              	100.00%		B4L0W7              	100.00%
Bootstrap support for A8J7G2 as seed ortholog is 100%.
Bootstrap support for B4L0W7 as seed ortholog is 100%.

Group of orthologs #244. Best score 462 bits
Score difference with first non-orthologous sequence - C.reinhardtii:462 D.mojavensis:306

A8JAG5              	100.00%		B4L0Z4              	100.00%
Bootstrap support for A8JAG5 as seed ortholog is 100%.
Bootstrap support for B4L0Z4 as seed ortholog is 100%.

Group of orthologs #245. Best score 461 bits
Score difference with first non-orthologous sequence - C.reinhardtii:461 D.mojavensis:461

A8IFC8              	100.00%		B4K8H8              	100.00%
Bootstrap support for A8IFC8 as seed ortholog is 100%.
Bootstrap support for B4K8H8 as seed ortholog is 100%.

Group of orthologs #246. Best score 460 bits
Score difference with first non-orthologous sequence - C.reinhardtii:460 D.mojavensis:460

A8HPA0              	100.00%		B4KGS8              	100.00%
Bootstrap support for A8HPA0 as seed ortholog is 100%.
Bootstrap support for B4KGS8 as seed ortholog is 100%.

Group of orthologs #247. Best score 457 bits
Score difference with first non-orthologous sequence - C.reinhardtii:457 D.mojavensis:336

A8ILF4              	100.00%		B4KFJ2              	100.00%
Bootstrap support for A8ILF4 as seed ortholog is 100%.
Bootstrap support for B4KFJ2 as seed ortholog is 100%.

Group of orthologs #248. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:11

A8I985              	100.00%		B4KFK7              	100.00%
Bootstrap support for A8I985 as seed ortholog is 99%.
Bootstrap support for B4KFK7 as seed ortholog is 40%.
Alternative seed ortholog is B4KQA1 (11 bits away from this cluster)

Group of orthologs #249. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:453 D.mojavensis:453

A8HNF4              	100.00%		B4L1N4              	100.00%
Bootstrap support for A8HNF4 as seed ortholog is 100%.
Bootstrap support for B4L1N4 as seed ortholog is 100%.

Group of orthologs #250. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 D.mojavensis:265

A8IAJ1              	100.00%		B4L2B2              	100.00%
Bootstrap support for A8IAJ1 as seed ortholog is 100%.
Bootstrap support for B4L2B2 as seed ortholog is 100%.

Group of orthologs #251. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 D.mojavensis:364

A8J8Y1              	100.00%		B4KG59              	100.00%
                    	       		B4KUT6              	27.15%
Bootstrap support for A8J8Y1 as seed ortholog is 100%.
Bootstrap support for B4KG59 as seed ortholog is 100%.

Group of orthologs #252. Best score 451 bits
Score difference with first non-orthologous sequence - C.reinhardtii:451 D.mojavensis:451

A8IW34              	100.00%		B4K8W7              	100.00%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for B4K8W7 as seed ortholog is 100%.

Group of orthologs #253. Best score 451 bits
Score difference with first non-orthologous sequence - C.reinhardtii:451 D.mojavensis:343

A8ITK3              	100.00%		B4KM04              	100.00%
Bootstrap support for A8ITK3 as seed ortholog is 100%.
Bootstrap support for B4KM04 as seed ortholog is 100%.

Group of orthologs #254. Best score 449 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:449

A8I495              	100.00%		B4L2R0              	100.00%
Bootstrap support for A8I495 as seed ortholog is 98%.
Bootstrap support for B4L2R0 as seed ortholog is 100%.

Group of orthologs #255. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 D.mojavensis:77

A8HXR2              	100.00%		B4KMK6              	100.00%
P17746              	12.08%		
Bootstrap support for A8HXR2 as seed ortholog is 100%.
Bootstrap support for B4KMK6 as seed ortholog is 98%.

Group of orthologs #256. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 D.mojavensis:448

A8ILR9              	100.00%		B4KSE1              	100.00%
Bootstrap support for A8ILR9 as seed ortholog is 79%.
Bootstrap support for B4KSE1 as seed ortholog is 100%.

Group of orthologs #257. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:448 D.mojavensis:448

A8J5F7              	100.00%		B4L7S4              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for B4L7S4 as seed ortholog is 100%.

Group of orthologs #258. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 D.mojavensis:87

A8IYG8              	100.00%		B4L688              	100.00%
                    	       		B4L689              	53.99%
Bootstrap support for A8IYG8 as seed ortholog is 100%.
Bootstrap support for B4L688 as seed ortholog is 99%.

Group of orthologs #259. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:162

A8ISF0              	100.00%		B4L2U2              	100.00%
Bootstrap support for A8ISF0 as seed ortholog is 99%.
Bootstrap support for B4L2U2 as seed ortholog is 99%.

Group of orthologs #260. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 D.mojavensis:447

A8JES3              	100.00%		B4L7S3              	100.00%
Bootstrap support for A8JES3 as seed ortholog is 100%.
Bootstrap support for B4L7S3 as seed ortholog is 100%.

Group of orthologs #261. Best score 446 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 D.mojavensis:247

A8JBC7              	100.00%		B4K754              	100.00%
Bootstrap support for A8JBC7 as seed ortholog is 100%.
Bootstrap support for B4K754 as seed ortholog is 100%.

Group of orthologs #262. Best score 446 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 D.mojavensis:348

A8HZA9              	100.00%		B4L5P1              	100.00%
Bootstrap support for A8HZA9 as seed ortholog is 100%.
Bootstrap support for B4L5P1 as seed ortholog is 100%.

Group of orthologs #263. Best score 444 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 D.mojavensis:293

A8IRT6              	100.00%		B4KIL0              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for B4KIL0 as seed ortholog is 100%.

Group of orthologs #264. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:77

A8HS40              	100.00%		B4KT01              	100.00%
Bootstrap support for A8HS40 as seed ortholog is 90%.
Bootstrap support for B4KT01 as seed ortholog is 98%.

Group of orthologs #265. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 D.mojavensis:331

A8IVI0              	100.00%		B4KRH6              	100.00%
Bootstrap support for A8IVI0 as seed ortholog is 100%.
Bootstrap support for B4KRH6 as seed ortholog is 100%.

Group of orthologs #266. Best score 442 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 D.mojavensis:442

A8J2R6              	100.00%		B4KQZ9              	100.00%
Bootstrap support for A8J2R6 as seed ortholog is 100%.
Bootstrap support for B4KQZ9 as seed ortholog is 100%.

Group of orthologs #267. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 D.mojavensis:441

A8HUI3              	100.00%		B4KHC6              	100.00%
Bootstrap support for A8HUI3 as seed ortholog is 100%.
Bootstrap support for B4KHC6 as seed ortholog is 100%.

Group of orthologs #268. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 D.mojavensis:441

A8HQU3              	100.00%		B4KJ03              	100.00%
Bootstrap support for A8HQU3 as seed ortholog is 100%.
Bootstrap support for B4KJ03 as seed ortholog is 100%.

Group of orthologs #269. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 D.mojavensis:441

A8IBR6              	100.00%		B4KQG8              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for B4KQG8 as seed ortholog is 100%.

Group of orthologs #270. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 D.mojavensis:261

A8J4M6              	100.00%		B4KYJ6              	100.00%
A8J4M4              	67.30%		
Bootstrap support for A8J4M6 as seed ortholog is 99%.
Bootstrap support for B4KYJ6 as seed ortholog is 97%.

Group of orthologs #271. Best score 440 bits
Score difference with first non-orthologous sequence - C.reinhardtii:440 D.mojavensis:440

A8J1V4              	100.00%		B4KJ73              	100.00%
Bootstrap support for A8J1V4 as seed ortholog is 100%.
Bootstrap support for B4KJ73 as seed ortholog is 100%.

Group of orthologs #272. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:438 D.mojavensis:438

A8HM54              	100.00%		B4KPG9              	100.00%
Bootstrap support for A8HM54 as seed ortholog is 100%.
Bootstrap support for B4KPG9 as seed ortholog is 100%.

Group of orthologs #273. Best score 437 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 D.mojavensis:167

A8IMP0              	100.00%		B4L2G5              	100.00%
                    	       		B4KCZ1              	62.07%
Bootstrap support for A8IMP0 as seed ortholog is 100%.
Bootstrap support for B4L2G5 as seed ortholog is 100%.

Group of orthologs #274. Best score 437 bits
Score difference with first non-orthologous sequence - C.reinhardtii:362 D.mojavensis:263

A8J3F9              	100.00%		B4KCS7              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 100%.
Bootstrap support for B4KCS7 as seed ortholog is 100%.

Group of orthologs #275. Best score 436 bits
Score difference with first non-orthologous sequence - C.reinhardtii:436 D.mojavensis:436

A8HPR5              	100.00%		B4L933              	100.00%
A8J484              	32.83%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for B4L933 as seed ortholog is 100%.

Group of orthologs #276. Best score 436 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 D.mojavensis:144

A8JAG8              	100.00%		B4KTB5              	100.00%
Bootstrap support for A8JAG8 as seed ortholog is 99%.
Bootstrap support for B4KTB5 as seed ortholog is 99%.

Group of orthologs #277. Best score 435 bits
Score difference with first non-orthologous sequence - C.reinhardtii:435 D.mojavensis:435

A8HRS5              	100.00%		B4KD13              	100.00%
Bootstrap support for A8HRS5 as seed ortholog is 100%.
Bootstrap support for B4KD13 as seed ortholog is 100%.

Group of orthologs #278. Best score 435 bits
Score difference with first non-orthologous sequence - C.reinhardtii:435 D.mojavensis:435

A8JCS4              	100.00%		B4K4T9              	100.00%
Bootstrap support for A8JCS4 as seed ortholog is 100%.
Bootstrap support for B4K4T9 as seed ortholog is 100%.

Group of orthologs #279. Best score 433 bits
Score difference with first non-orthologous sequence - C.reinhardtii:433 D.mojavensis:433

A8HRF8              	100.00%		B4KA44              	100.00%
Bootstrap support for A8HRF8 as seed ortholog is 100%.
Bootstrap support for B4KA44 as seed ortholog is 100%.

Group of orthologs #280. Best score 432 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 D.mojavensis:432

A8I0M0              	100.00%		B4KNZ0              	100.00%
Bootstrap support for A8I0M0 as seed ortholog is 100%.
Bootstrap support for B4KNZ0 as seed ortholog is 100%.

Group of orthologs #281. Best score 432 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:146

A8IET6              	100.00%		B4KMF6              	100.00%
Bootstrap support for A8IET6 as seed ortholog is 99%.
Bootstrap support for B4KMF6 as seed ortholog is 99%.

Group of orthologs #282. Best score 432 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 D.mojavensis:367

A8JGX1              	100.00%		B4KIK4              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for B4KIK4 as seed ortholog is 100%.

Group of orthologs #283. Best score 431 bits
Score difference with first non-orthologous sequence - C.reinhardtii:431 D.mojavensis:431

A8HNN9              	100.00%		B4L8X6              	100.00%
Bootstrap support for A8HNN9 as seed ortholog is 100%.
Bootstrap support for B4L8X6 as seed ortholog is 100%.

Group of orthologs #284. Best score 431 bits
Score difference with first non-orthologous sequence - C.reinhardtii:431 D.mojavensis:172

A8JJ39              	100.00%		B4LA04              	100.00%
Bootstrap support for A8JJ39 as seed ortholog is 100%.
Bootstrap support for B4LA04 as seed ortholog is 99%.

Group of orthologs #285. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:430 D.mojavensis:304

A8JH33              	100.00%		B4KN18              	100.00%
A8IDC5              	79.24%		
A8JH34              	66.10%		
A8IDD2              	52.00%		
Bootstrap support for A8JH33 as seed ortholog is 100%.
Bootstrap support for B4KN18 as seed ortholog is 100%.

Group of orthologs #286. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:430 D.mojavensis:103

A8IT31              	100.00%		B4KWQ9              	100.00%
                    	       		B4KXV6              	5.38%
Bootstrap support for A8IT31 as seed ortholog is 100%.
Bootstrap support for B4KWQ9 as seed ortholog is 99%.

Group of orthologs #287. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:430 D.mojavensis:430

A8I8T3              	100.00%		B4KRF8              	100.00%
Bootstrap support for A8I8T3 as seed ortholog is 100%.
Bootstrap support for B4KRF8 as seed ortholog is 100%.

Group of orthologs #288. Best score 429 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:429

A8HYN3              	100.00%		B4K8L2              	100.00%
Bootstrap support for A8HYN3 as seed ortholog is 87%.
Bootstrap support for B4K8L2 as seed ortholog is 100%.

Group of orthologs #289. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:428 D.mojavensis:428

A8JF71              	100.00%		B4KLL0              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for B4KLL0 as seed ortholog is 100%.

Group of orthologs #290. Best score 427 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:43

A8J510              	100.00%		B4L0P1              	100.00%
                    	       		B4KG68              	16.93%
Bootstrap support for A8J510 as seed ortholog is 89%.
Bootstrap support for B4L0P1 as seed ortholog is 76%.

Group of orthologs #291. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 D.mojavensis:209

A8J3M6              	100.00%		B4KWX4              	100.00%
Bootstrap support for A8J3M6 as seed ortholog is 100%.
Bootstrap support for B4KWX4 as seed ortholog is 100%.

Group of orthologs #292. Best score 424 bits
Score difference with first non-orthologous sequence - C.reinhardtii:424 D.mojavensis:424

A8J8C7              	100.00%		B4K8R6              	100.00%
                    	       		B4LAQ6              	87.34%
Bootstrap support for A8J8C7 as seed ortholog is 100%.
Bootstrap support for B4K8R6 as seed ortholog is 100%.

Group of orthologs #293. Best score 423 bits
Score difference with first non-orthologous sequence - C.reinhardtii:423 D.mojavensis:61

A8IWJ8              	100.00%		B4KY99              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for B4KY99 as seed ortholog is 98%.

Group of orthologs #294. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 D.mojavensis:421

A8IUW1              	100.00%		B4KAX8              	100.00%
A8IUZ4              	50.66%		B4KSH2              	15.28%
A8IUW2              	49.50%		
Bootstrap support for A8IUW1 as seed ortholog is 61%.
Alternative seed ortholog is A8HWC2 (12 bits away from this cluster)
Bootstrap support for B4KAX8 as seed ortholog is 100%.

Group of orthologs #295. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:307

A8HME7              	100.00%		B4KFY5              	100.00%
Bootstrap support for A8HME7 as seed ortholog is 99%.
Bootstrap support for B4KFY5 as seed ortholog is 100%.

Group of orthologs #296. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 D.mojavensis:339

A8J5P7              	100.00%		B4K945              	100.00%
Bootstrap support for A8J5P7 as seed ortholog is 100%.
Bootstrap support for B4K945 as seed ortholog is 100%.

Group of orthologs #297. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:418

A8JHR9              	100.00%		B4KMV6              	100.00%
                    	       		B4KTC6              	6.67%
Bootstrap support for A8JHR9 as seed ortholog is 100%.
Bootstrap support for B4KMV6 as seed ortholog is 100%.

Group of orthologs #298. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:60

A8I263              	100.00%		B4KKW3              	100.00%
Bootstrap support for A8I263 as seed ortholog is 96%.
Bootstrap support for B4KKW3 as seed ortholog is 96%.

Group of orthologs #299. Best score 417 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 D.mojavensis:160

A8J0R7              	100.00%		B4L6W2              	100.00%
                    	       		B4KUV1              	38.86%
Bootstrap support for A8J0R7 as seed ortholog is 100%.
Bootstrap support for B4L6W2 as seed ortholog is 100%.

Group of orthologs #300. Best score 417 bits
Score difference with first non-orthologous sequence - C.reinhardtii:417 D.mojavensis:417

A8IE23              	100.00%		B4KTQ5              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for B4KTQ5 as seed ortholog is 100%.

Group of orthologs #301. Best score 416 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:151

Q9SNV7              	100.00%		B4KCM5              	100.00%
Bootstrap support for Q9SNV7 as seed ortholog is 99%.
Bootstrap support for B4KCM5 as seed ortholog is 99%.

Group of orthologs #302. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 D.mojavensis:415

A8HN92              	100.00%		B4KE16              	100.00%
Bootstrap support for A8HN92 as seed ortholog is 100%.
Bootstrap support for B4KE16 as seed ortholog is 100%.

Group of orthologs #303. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 D.mojavensis:222

Q6IV67              	100.00%		B4K8B3              	100.00%
Bootstrap support for Q6IV67 as seed ortholog is 100%.
Bootstrap support for B4K8B3 as seed ortholog is 100%.

Group of orthologs #304. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 D.mojavensis:415

A8JHC1              	100.00%		B4KIL4              	100.00%
Bootstrap support for A8JHC1 as seed ortholog is 100%.
Bootstrap support for B4KIL4 as seed ortholog is 100%.

Group of orthologs #305. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 D.mojavensis:269

A8IAM9              	100.00%		B4K612              	100.00%
Bootstrap support for A8IAM9 as seed ortholog is 100%.
Bootstrap support for B4K612 as seed ortholog is 100%.

Group of orthologs #306. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 D.mojavensis:259

A8ITF6              	100.00%		B4KLH6              	100.00%
Bootstrap support for A8ITF6 as seed ortholog is 100%.
Bootstrap support for B4KLH6 as seed ortholog is 100%.

Group of orthologs #307. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 D.mojavensis:305

A8IPI0              	100.00%		B4K797              	100.00%
Bootstrap support for A8IPI0 as seed ortholog is 100%.
Bootstrap support for B4K797 as seed ortholog is 100%.

Group of orthologs #308. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 D.mojavensis:55

A8J8V7              	100.00%		B4KM55              	100.00%
Bootstrap support for A8J8V7 as seed ortholog is 100%.
Bootstrap support for B4KM55 as seed ortholog is 90%.

Group of orthologs #309. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:410 D.mojavensis:111

A8J027              	100.00%		B4KFP8              	100.00%
Bootstrap support for A8J027 as seed ortholog is 100%.
Bootstrap support for B4KFP8 as seed ortholog is 98%.

Group of orthologs #310. Best score 409 bits
Score difference with first non-orthologous sequence - C.reinhardtii:409 D.mojavensis:409

A8HYQ1              	100.00%		B4L926              	100.00%
Bootstrap support for A8HYQ1 as seed ortholog is 100%.
Bootstrap support for B4L926 as seed ortholog is 100%.

Group of orthologs #311. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 D.mojavensis:408

A8J1Z0              	100.00%		B4K517              	100.00%
Bootstrap support for A8J1Z0 as seed ortholog is 100%.
Bootstrap support for B4K517 as seed ortholog is 100%.

Group of orthologs #312. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 D.mojavensis:322

A8IBJ5              	100.00%		B4L5Z7              	100.00%
Bootstrap support for A8IBJ5 as seed ortholog is 100%.
Bootstrap support for B4L5Z7 as seed ortholog is 100%.

Group of orthologs #313. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:172

A8HQF5              	100.00%		B4L0X3              	100.00%
Bootstrap support for A8HQF5 as seed ortholog is 99%.
Bootstrap support for B4L0X3 as seed ortholog is 100%.

Group of orthologs #314. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 D.mojavensis:69

A8J1F4              	100.00%		B4KI23              	100.00%
Bootstrap support for A8J1F4 as seed ortholog is 99%.
Bootstrap support for B4KI23 as seed ortholog is 94%.

Group of orthologs #315. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:406 D.mojavensis:406

A8I901              	100.00%		B4L843              	100.00%
Bootstrap support for A8I901 as seed ortholog is 100%.
Bootstrap support for B4L843 as seed ortholog is 100%.

Group of orthologs #316. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 D.mojavensis:140

A8IEF3              	100.00%		B4KC99              	100.00%
Bootstrap support for A8IEF3 as seed ortholog is 100%.
Bootstrap support for B4KC99 as seed ortholog is 100%.

Group of orthologs #317. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:405 D.mojavensis:405

A8IQD6              	100.00%		B4KBR3              	100.00%
Bootstrap support for A8IQD6 as seed ortholog is 100%.
Bootstrap support for B4KBR3 as seed ortholog is 100%.

Group of orthologs #318. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 D.mojavensis:405

A8HZZ4              	100.00%		B4L1S6              	100.00%
Bootstrap support for A8HZZ4 as seed ortholog is 99%.
Bootstrap support for B4L1S6 as seed ortholog is 100%.

Group of orthologs #319. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:225

A8JHL1              	100.00%		B4L8N1              	100.00%
                    	       		B4K9I5              	73.01%
Bootstrap support for A8JHL1 as seed ortholog is 89%.
Bootstrap support for B4L8N1 as seed ortholog is 99%.

Group of orthologs #320. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 D.mojavensis:268

A8ITM4              	100.00%		B4K873              	100.00%
Bootstrap support for A8ITM4 as seed ortholog is 100%.
Bootstrap support for B4K873 as seed ortholog is 100%.

Group of orthologs #321. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:403 D.mojavensis:403

A8IXE2              	100.00%		B4KL11              	100.00%
Bootstrap support for A8IXE2 as seed ortholog is 100%.
Bootstrap support for B4KL11 as seed ortholog is 100%.

Group of orthologs #322. Best score 402 bits
Score difference with first non-orthologous sequence - C.reinhardtii:402 D.mojavensis:402

A8IZ78              	100.00%		B4L0Q6              	100.00%
Bootstrap support for A8IZ78 as seed ortholog is 100%.
Bootstrap support for B4L0Q6 as seed ortholog is 100%.

Group of orthologs #323. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:400

A8IVR6              	100.00%		B4K5E3              	100.00%
                    	       		B4K5E2              	14.53%
Bootstrap support for A8IVR6 as seed ortholog is 99%.
Bootstrap support for B4K5E3 as seed ortholog is 100%.

Group of orthologs #324. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 D.mojavensis:137

A8IZ49              	100.00%		B4K4W4              	100.00%
Bootstrap support for A8IZ49 as seed ortholog is 99%.
Bootstrap support for B4K4W4 as seed ortholog is 99%.

Group of orthologs #325. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 D.mojavensis:400

A8I988              	100.00%		B4KHA9              	100.00%
Bootstrap support for A8I988 as seed ortholog is 100%.
Bootstrap support for B4KHA9 as seed ortholog is 100%.

Group of orthologs #326. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 D.mojavensis:400

A8I274              	100.00%		B4KNN2              	100.00%
Bootstrap support for A8I274 as seed ortholog is 100%.
Bootstrap support for B4KNN2 as seed ortholog is 100%.

Group of orthologs #327. Best score 399 bits
Score difference with first non-orthologous sequence - C.reinhardtii:399 D.mojavensis:399

A8J149              	100.00%		B4KIE0              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for B4KIE0 as seed ortholog is 100%.

Group of orthologs #328. Best score 399 bits
Score difference with first non-orthologous sequence - C.reinhardtii:399 D.mojavensis:399

A8J5W3              	100.00%		B4KGU1              	100.00%
Bootstrap support for A8J5W3 as seed ortholog is 100%.
Bootstrap support for B4KGU1 as seed ortholog is 100%.

Group of orthologs #329. Best score 399 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 D.mojavensis:399

A8J2Z9              	100.00%		B4KNM1              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 100%.
Bootstrap support for B4KNM1 as seed ortholog is 100%.

Group of orthologs #330. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 D.mojavensis:314

A8ILK1              	100.00%		B4KZU6              	100.00%
Bootstrap support for A8ILK1 as seed ortholog is 100%.
Bootstrap support for B4KZU6 as seed ortholog is 100%.

Group of orthologs #331. Best score 397 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 D.mojavensis:158

A8HMC0              	100.00%		B4K4E6              	100.00%
Bootstrap support for A8HMC0 as seed ortholog is 100%.
Bootstrap support for B4K4E6 as seed ortholog is 99%.

Group of orthologs #332. Best score 397 bits
Score difference with first non-orthologous sequence - C.reinhardtii:397 D.mojavensis:397

A8JCG5              	100.00%		B4L9D9              	100.00%
Bootstrap support for A8JCG5 as seed ortholog is 100%.
Bootstrap support for B4L9D9 as seed ortholog is 100%.

Group of orthologs #333. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:394

A8I305              	100.00%		B4L4A8              	100.00%
                    	       		B4KFN9              	31.27%
Bootstrap support for A8I305 as seed ortholog is 87%.
Bootstrap support for B4L4A8 as seed ortholog is 100%.

Group of orthologs #334. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 D.mojavensis:394

A8IJH7              	100.00%		B4KPN5              	100.00%
Bootstrap support for A8IJH7 as seed ortholog is 100%.
Bootstrap support for B4KPN5 as seed ortholog is 100%.

Group of orthologs #335. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 D.mojavensis:80

A8JH58              	100.00%		B4KZ02              	100.00%
Bootstrap support for A8JH58 as seed ortholog is 61%.
Alternative seed ortholog is A8IK58 (19 bits away from this cluster)
Bootstrap support for B4KZ02 as seed ortholog is 94%.

Group of orthologs #336. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:393 D.mojavensis:307

A8HQB6              	100.00%		B4KKG4              	100.00%
                    	       		B4KN68              	20.42%
                    	       		B4KNI7              	20.12%
                    	       		B4KKG6              	19.67%
                    	       		B4KNI9              	9.76%
Bootstrap support for A8HQB6 as seed ortholog is 100%.
Bootstrap support for B4KKG4 as seed ortholog is 100%.

Group of orthologs #337. Best score 392 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 D.mojavensis:113

A8JB97              	100.00%		B4KQV9              	100.00%
                    	       		B4KRF0              	26.28%
                    	       		B4KRE9              	25.86%
                    	       		B4L203              	25.03%
                    	       		B4KRF1              	20.84%
Bootstrap support for A8JB97 as seed ortholog is 100%.
Bootstrap support for B4KQV9 as seed ortholog is 98%.

Group of orthologs #338. Best score 392 bits
Score difference with first non-orthologous sequence - C.reinhardtii:392 D.mojavensis:392

A8J0K7              	100.00%		B4K684              	100.00%
Bootstrap support for A8J0K7 as seed ortholog is 100%.
Bootstrap support for B4K684 as seed ortholog is 100%.

Group of orthologs #339. Best score 391 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 D.mojavensis:124

A8IJZ3              	100.00%		B4KUS4              	100.00%
Bootstrap support for A8IJZ3 as seed ortholog is 100%.
Bootstrap support for B4KUS4 as seed ortholog is 99%.

Group of orthologs #340. Best score 391 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 D.mojavensis:203

A8JHA8              	100.00%		B4K7A0              	100.00%
Bootstrap support for A8JHA8 as seed ortholog is 100%.
Bootstrap support for B4K7A0 as seed ortholog is 100%.

Group of orthologs #341. Best score 390 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 D.mojavensis:160

A8ICS4              	100.00%		B4KPH1              	100.00%
Bootstrap support for A8ICS4 as seed ortholog is 99%.
Bootstrap support for B4KPH1 as seed ortholog is 99%.

Group of orthologs #342. Best score 390 bits
Score difference with first non-orthologous sequence - C.reinhardtii:390 D.mojavensis:390

A8HU09              	100.00%		B4L1K2              	100.00%
Bootstrap support for A8HU09 as seed ortholog is 100%.
Bootstrap support for B4L1K2 as seed ortholog is 100%.

Group of orthologs #343. Best score 390 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:124

A8J7E4              	100.00%		B4KNE9              	100.00%
Bootstrap support for A8J7E4 as seed ortholog is 99%.
Bootstrap support for B4KNE9 as seed ortholog is 99%.

Group of orthologs #344. Best score 390 bits
Score difference with first non-orthologous sequence - C.reinhardtii:390 D.mojavensis:390

A8J3I4              	100.00%		B4L2V4              	100.00%
Bootstrap support for A8J3I4 as seed ortholog is 100%.
Bootstrap support for B4L2V4 as seed ortholog is 100%.

Group of orthologs #345. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:389 D.mojavensis:389

A8J537              	100.00%		B4KXS2              	100.00%
                    	       		B4KEW9              	58.20%
Bootstrap support for A8J537 as seed ortholog is 100%.
Bootstrap support for B4KXS2 as seed ortholog is 100%.

Group of orthologs #346. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 D.mojavensis:278

A8JD37              	100.00%		B4KFG7              	100.00%
Bootstrap support for A8JD37 as seed ortholog is 100%.
Bootstrap support for B4KFG7 as seed ortholog is 100%.

Group of orthologs #347. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 D.mojavensis:388

A8J0I0              	100.00%		B4K9Q9              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for B4K9Q9 as seed ortholog is 100%.

Group of orthologs #348. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 D.mojavensis:236

A8J760              	100.00%		B4K5I4              	100.00%
Bootstrap support for A8J760 as seed ortholog is 100%.
Bootstrap support for B4K5I4 as seed ortholog is 100%.

Group of orthologs #349. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 D.mojavensis:167

A8J240              	100.00%		B4KA13              	100.00%
Bootstrap support for A8J240 as seed ortholog is 99%.
Bootstrap support for B4KA13 as seed ortholog is 99%.

Group of orthologs #350. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 D.mojavensis:385

A8IRV6              	100.00%		B4KNN9              	100.00%
Bootstrap support for A8IRV6 as seed ortholog is 100%.
Bootstrap support for B4KNN9 as seed ortholog is 100%.

Group of orthologs #351. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 D.mojavensis:385

A8J3L1              	100.00%		B4KSW9              	100.00%
Bootstrap support for A8J3L1 as seed ortholog is 100%.
Bootstrap support for B4KSW9 as seed ortholog is 100%.

Group of orthologs #352. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 D.mojavensis:330

A8IEW6              	100.00%		B4L927              	100.00%
Bootstrap support for A8IEW6 as seed ortholog is 100%.
Bootstrap support for B4L927 as seed ortholog is 100%.

Group of orthologs #353. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 D.mojavensis:21

A8IQ05              	100.00%		B4KVB1              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for B4KVB1 as seed ortholog is 73%.
Alternative seed ortholog is B4K9E6 (21 bits away from this cluster)

Group of orthologs #354. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 D.mojavensis:384

A8IS72              	100.00%		B4L5E4              	100.00%
Bootstrap support for A8IS72 as seed ortholog is 100%.
Bootstrap support for B4L5E4 as seed ortholog is 100%.

Group of orthologs #355. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 D.mojavensis:342

A8J3F6              	100.00%		B4L036              	100.00%
Bootstrap support for A8J3F6 as seed ortholog is 100%.
Bootstrap support for B4L036 as seed ortholog is 100%.

Group of orthologs #356. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:309

A8I2I6              	100.00%		B4KXA5              	100.00%
                    	       		B4L3G8              	17.75%
Bootstrap support for A8I2I6 as seed ortholog is 98%.
Bootstrap support for B4KXA5 as seed ortholog is 100%.

Group of orthologs #357. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 D.mojavensis:383

A8JH28              	100.00%		B4KGZ0              	100.00%
Bootstrap support for A8JH28 as seed ortholog is 100%.
Bootstrap support for B4KGZ0 as seed ortholog is 100%.

Group of orthologs #358. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 D.mojavensis:382

A8JGK5              	100.00%		B4KY00              	100.00%
Bootstrap support for A8JGK5 as seed ortholog is 100%.
Bootstrap support for B4KY00 as seed ortholog is 100%.

Group of orthologs #359. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 D.mojavensis:381

A8HME4              	100.00%		B4KJE0              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for B4KJE0 as seed ortholog is 100%.

Group of orthologs #360. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 D.mojavensis:381

A8I2V9              	100.00%		B4KYY0              	100.00%
Bootstrap support for A8I2V9 as seed ortholog is 38%.
Alternative seed ortholog is A8JGF7 (7 bits away from this cluster)
Bootstrap support for B4KYY0 as seed ortholog is 100%.

Group of orthologs #361. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 D.mojavensis:381

A8JFT1              	100.00%		B4KER3              	100.00%
Bootstrap support for A8JFT1 as seed ortholog is 100%.
Bootstrap support for B4KER3 as seed ortholog is 100%.

Group of orthologs #362. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 D.mojavensis:381

A8IVK1              	100.00%		B4KYM8              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 100%.
Bootstrap support for B4KYM8 as seed ortholog is 100%.

Group of orthologs #363. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 D.mojavensis:381

A8JHM2              	100.00%		B4KN00              	100.00%
Bootstrap support for A8JHM2 as seed ortholog is 100%.
Bootstrap support for B4KN00 as seed ortholog is 100%.

Group of orthologs #364. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:205

A8J0Y2              	100.00%		B4L7F3              	100.00%
Bootstrap support for A8J0Y2 as seed ortholog is 100%.
Bootstrap support for B4L7F3 as seed ortholog is 100%.

Group of orthologs #365. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 D.mojavensis:290

A8ITS8              	100.00%		B4K9U6              	100.00%
                    	       		B4K9U7              	55.62%
Bootstrap support for A8ITS8 as seed ortholog is 100%.
Bootstrap support for B4K9U6 as seed ortholog is 100%.

Group of orthologs #366. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 D.mojavensis:317

Q84X74              	100.00%		B4KVN2              	100.00%
                    	       		B4KN91              	46.35%
Bootstrap support for Q84X74 as seed ortholog is 100%.
Bootstrap support for B4KVN2 as seed ortholog is 100%.

Group of orthologs #367. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 D.mojavensis:379

A8JD96              	100.00%		B4KHK2              	100.00%
Bootstrap support for A8JD96 as seed ortholog is 100%.
Bootstrap support for B4KHK2 as seed ortholog is 100%.

Group of orthologs #368. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:378 D.mojavensis:250

A8HXQ8              	100.00%		B4KRF2              	100.00%
Bootstrap support for A8HXQ8 as seed ortholog is 100%.
Bootstrap support for B4KRF2 as seed ortholog is 100%.

Group of orthologs #369. Best score 378 bits
Score difference with first non-orthologous sequence - C.reinhardtii:378 D.mojavensis:378

A8IYD3              	100.00%		B4KCQ6              	100.00%
Bootstrap support for A8IYD3 as seed ortholog is 100%.
Bootstrap support for B4KCQ6 as seed ortholog is 100%.

Group of orthologs #370. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 D.mojavensis:377

A8IH03              	100.00%		B4K5X3              	100.00%
Bootstrap support for A8IH03 as seed ortholog is 100%.
Bootstrap support for B4K5X3 as seed ortholog is 100%.

Group of orthologs #371. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 D.mojavensis:377

A8HYU5              	100.00%		B4KFN6              	100.00%
Bootstrap support for A8HYU5 as seed ortholog is 100%.
Bootstrap support for B4KFN6 as seed ortholog is 100%.

Group of orthologs #372. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:289

Q6Q242              	100.00%		B4K806              	100.00%
Bootstrap support for Q6Q242 as seed ortholog is 99%.
Bootstrap support for B4K806 as seed ortholog is 100%.

Group of orthologs #373. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 D.mojavensis:377

A8J4X2              	100.00%		B4L518              	100.00%
Bootstrap support for A8J4X2 as seed ortholog is 100%.
Bootstrap support for B4L518 as seed ortholog is 100%.

Group of orthologs #374. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:376 D.mojavensis:376

A8HQF0              	100.00%		B4KRY4              	100.00%
Bootstrap support for A8HQF0 as seed ortholog is 100%.
Bootstrap support for B4KRY4 as seed ortholog is 100%.

Group of orthologs #375. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 D.mojavensis:374

A8HPD2              	100.00%		B4KS46              	100.00%
                    	       		B4KQJ0              	38.66%
                    	       		B4KS47              	31.94%
                    	       		B4KQW9              	30.84%
Bootstrap support for A8HPD2 as seed ortholog is 100%.
Bootstrap support for B4KS46 as seed ortholog is 100%.

Group of orthologs #376. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:20

A8I1P3              	100.00%		B4KJH9              	100.00%
Bootstrap support for A8I1P3 as seed ortholog is 95%.
Bootstrap support for B4KJH9 as seed ortholog is 74%.
Alternative seed ortholog is B4K8V4 (20 bits away from this cluster)

Group of orthologs #377. Best score 373 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 D.mojavensis:271

A8HYR9              	100.00%		B4KBE0              	100.00%
Bootstrap support for A8HYR9 as seed ortholog is 100%.
Bootstrap support for B4KBE0 as seed ortholog is 100%.

Group of orthologs #378. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 D.mojavensis:372

A8IG50              	100.00%		B4K8H7              	100.00%
Bootstrap support for A8IG50 as seed ortholog is 92%.
Bootstrap support for B4K8H7 as seed ortholog is 100%.

Group of orthologs #379. Best score 372 bits
Score difference with first non-orthologous sequence - C.reinhardtii:372 D.mojavensis:372

A8JFC4              	100.00%		B4KWJ9              	100.00%
Bootstrap support for A8JFC4 as seed ortholog is 100%.
Bootstrap support for B4KWJ9 as seed ortholog is 100%.

Group of orthologs #380. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 D.mojavensis:63

A8I733              	100.00%		B4K6H2              	100.00%
A8I710              	80.09%		
Q5YLC2              	53.24%		
Bootstrap support for A8I733 as seed ortholog is 100%.
Bootstrap support for B4K6H2 as seed ortholog is 84%.

Group of orthologs #381. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:220

A8J1V5              	100.00%		B4KKB2              	100.00%
A8HYH4              	10.98%		
Bootstrap support for A8J1V5 as seed ortholog is 100%.
Bootstrap support for B4KKB2 as seed ortholog is 100%.

Group of orthologs #382. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:45

A8J386              	100.00%		B4L6N2              	100.00%
                    	       		B4KHA7              	24.66%
Bootstrap support for A8J386 as seed ortholog is 96%.
Bootstrap support for B4L6N2 as seed ortholog is 67%.
Alternative seed ortholog is B4L1W3 (45 bits away from this cluster)

Group of orthologs #383. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 D.mojavensis:207

A8HY93              	100.00%		B4L675              	100.00%
Bootstrap support for A8HY93 as seed ortholog is 100%.
Bootstrap support for B4L675 as seed ortholog is 100%.

Group of orthologs #384. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 D.mojavensis:83

A8IDY0              	100.00%		B4L743              	100.00%
Bootstrap support for A8IDY0 as seed ortholog is 100%.
Bootstrap support for B4L743 as seed ortholog is 99%.

Group of orthologs #385. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 D.mojavensis:371

A8J5T5              	100.00%		B4KTR3              	100.00%
Bootstrap support for A8J5T5 as seed ortholog is 100%.
Bootstrap support for B4KTR3 as seed ortholog is 100%.

Group of orthologs #386. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 D.mojavensis:119

A8J018              	100.00%		B4L1Z2              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for B4L1Z2 as seed ortholog is 99%.

Group of orthologs #387. Best score 370 bits
Score difference with first non-orthologous sequence - C.reinhardtii:370 D.mojavensis:370

A8IMP6              	100.00%		B4KZS2              	100.00%
Bootstrap support for A8IMP6 as seed ortholog is 100%.
Bootstrap support for B4KZS2 as seed ortholog is 100%.

Group of orthologs #388. Best score 368 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 D.mojavensis:271

A8J7U9              	100.00%		B4K730              	100.00%
Bootstrap support for A8J7U9 as seed ortholog is 99%.
Bootstrap support for B4K730 as seed ortholog is 100%.

Group of orthologs #389. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:63

A8JGV6              	100.00%		B4K7H7              	100.00%
Bootstrap support for A8JGV6 as seed ortholog is 99%.
Bootstrap support for B4K7H7 as seed ortholog is 98%.

Group of orthologs #390. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 D.mojavensis:269

A8IRV0              	100.00%		B4KHH2              	100.00%
Bootstrap support for A8IRV0 as seed ortholog is 100%.
Bootstrap support for B4KHH2 as seed ortholog is 100%.

Group of orthologs #391. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:364 D.mojavensis:364

A8HQJ4              	100.00%		B4KME4              	100.00%
Bootstrap support for A8HQJ4 as seed ortholog is 100%.
Bootstrap support for B4KME4 as seed ortholog is 100%.

Group of orthologs #392. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 D.mojavensis:361

A8IP78              	100.00%		B4KD49              	100.00%
Bootstrap support for A8IP78 as seed ortholog is 100%.
Bootstrap support for B4KD49 as seed ortholog is 100%.

Group of orthologs #393. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 D.mojavensis:243

A8J7H0              	100.00%		B4KRI3              	100.00%
Bootstrap support for A8J7H0 as seed ortholog is 100%.
Bootstrap support for B4KRI3 as seed ortholog is 100%.

Group of orthologs #394. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 D.mojavensis:361

A8JCY9              	100.00%		B4KSR6              	100.00%
Bootstrap support for A8JCY9 as seed ortholog is 100%.
Bootstrap support for B4KSR6 as seed ortholog is 100%.

Group of orthologs #395. Best score 360 bits
Score difference with first non-orthologous sequence - C.reinhardtii:360 D.mojavensis:360

A8HVA6              	100.00%		B4KE64              	100.00%
Bootstrap support for A8HVA6 as seed ortholog is 100%.
Bootstrap support for B4KE64 as seed ortholog is 100%.

Group of orthologs #396. Best score 360 bits
Score difference with first non-orthologous sequence - C.reinhardtii:360 D.mojavensis:360

A8ILT1              	100.00%		B4KPW1              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 100%.
Bootstrap support for B4KPW1 as seed ortholog is 100%.

Group of orthologs #397. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 D.mojavensis:359

A8IN76              	100.00%		B4KKU5              	100.00%
                    	       		B4K7A2              	58.41%
Bootstrap support for A8IN76 as seed ortholog is 100%.
Bootstrap support for B4KKU5 as seed ortholog is 100%.

Group of orthologs #398. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 D.mojavensis:359

A8IDH5              	100.00%		B4L6N0              	100.00%
Bootstrap support for A8IDH5 as seed ortholog is 100%.
Bootstrap support for B4L6N0 as seed ortholog is 100%.

Group of orthologs #399. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 D.mojavensis:246

A8HX38              	100.00%		B4KSD1              	100.00%
                    	       		B4KCG9              	87.63%
Bootstrap support for A8HX38 as seed ortholog is 100%.
Bootstrap support for B4KSD1 as seed ortholog is 100%.

Group of orthologs #400. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 D.mojavensis:358

A8IC90              	100.00%		B4L132              	100.00%
Bootstrap support for A8IC90 as seed ortholog is 100%.
Bootstrap support for B4L132 as seed ortholog is 100%.

Group of orthologs #401. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:358

Q9S7V1              	100.00%		B4KJU1              	100.00%
Bootstrap support for Q9S7V1 as seed ortholog is 99%.
Bootstrap support for B4KJU1 as seed ortholog is 100%.

Group of orthologs #402. Best score 356 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 D.mojavensis:250

A8HY75              	100.00%		B4KHF0              	100.00%
Bootstrap support for A8HY75 as seed ortholog is 100%.
Bootstrap support for B4KHF0 as seed ortholog is 100%.

Group of orthologs #403. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:355 D.mojavensis:355

A8JHS9              	100.00%		B4KJT9              	100.00%
Bootstrap support for A8JHS9 as seed ortholog is 100%.
Bootstrap support for B4KJT9 as seed ortholog is 100%.

Group of orthologs #404. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 D.mojavensis:354

A8JBB2              	100.00%		B4KID9              	100.00%
Bootstrap support for A8JBB2 as seed ortholog is 100%.
Bootstrap support for B4KID9 as seed ortholog is 100%.

Group of orthologs #405. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:63

A8J0X4              	100.00%		B4L2J4              	100.00%
Bootstrap support for A8J0X4 as seed ortholog is 99%.
Bootstrap support for B4L2J4 as seed ortholog is 95%.

Group of orthologs #406. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 D.mojavensis:354

A8JFJ2              	100.00%		B4L6E9              	100.00%
Bootstrap support for A8JFJ2 as seed ortholog is 100%.
Bootstrap support for B4L6E9 as seed ortholog is 100%.

Group of orthologs #407. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 D.mojavensis:353

A8IKA1              	100.00%		B4KF66              	100.00%
Bootstrap support for A8IKA1 as seed ortholog is 100%.
Bootstrap support for B4KF66 as seed ortholog is 100%.

Group of orthologs #408. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 D.mojavensis:213

A8IHI1              	100.00%		B4KKK4              	100.00%
                    	       		B4KIH7              	11.28%
Bootstrap support for A8IHI1 as seed ortholog is 100%.
Bootstrap support for B4KKK4 as seed ortholog is 100%.

Group of orthologs #409. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 D.mojavensis:43

P93106              	100.00%		B4K7H4              	100.00%
                    	       		B4KQH7              	5.59%
Bootstrap support for P93106 as seed ortholog is 100%.
Bootstrap support for B4K7H4 as seed ortholog is 93%.

Group of orthologs #410. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 D.mojavensis:101

A8IU92              	100.00%		B4KHR6              	100.00%
Bootstrap support for A8IU92 as seed ortholog is 100%.
Bootstrap support for B4KHR6 as seed ortholog is 100%.

Group of orthologs #411. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 D.mojavensis:352

A8IQV5              	100.00%		B4KZ45              	100.00%
Bootstrap support for A8IQV5 as seed ortholog is 100%.
Bootstrap support for B4KZ45 as seed ortholog is 100%.

Group of orthologs #412. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:351

A8JC04              	100.00%		B4KLD0              	100.00%
                    	       		B4KL59              	35.56%
Bootstrap support for A8JC04 as seed ortholog is 99%.
Bootstrap support for B4KLD0 as seed ortholog is 100%.

Group of orthologs #413. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 D.mojavensis:220

A8HNP3              	100.00%		B4KH05              	100.00%
Bootstrap support for A8HNP3 as seed ortholog is 100%.
Bootstrap support for B4KH05 as seed ortholog is 100%.

Group of orthologs #414. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 D.mojavensis:351

A8IK52              	100.00%		B4KHP6              	100.00%
Bootstrap support for A8IK52 as seed ortholog is 100%.
Bootstrap support for B4KHP6 as seed ortholog is 100%.

Group of orthologs #415. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 D.mojavensis:351

A8J3U8              	100.00%		B4KHB1              	100.00%
Bootstrap support for A8J3U8 as seed ortholog is 100%.
Bootstrap support for B4KHB1 as seed ortholog is 100%.

Group of orthologs #416. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 D.mojavensis:351

A8JCM5              	100.00%		B4KMJ6              	100.00%
Bootstrap support for A8JCM5 as seed ortholog is 100%.
Bootstrap support for B4KMJ6 as seed ortholog is 100%.

Group of orthologs #417. Best score 350 bits
Score difference with first non-orthologous sequence - C.reinhardtii:350 D.mojavensis:276

A8HMQ7              	100.00%		B4K7W4              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for B4K7W4 as seed ortholog is 100%.

Group of orthologs #418. Best score 350 bits
Score difference with first non-orthologous sequence - C.reinhardtii:350 D.mojavensis:350

A8IJG8              	100.00%		B4L8I2              	100.00%
Bootstrap support for A8IJG8 as seed ortholog is 100%.
Bootstrap support for B4L8I2 as seed ortholog is 100%.

Group of orthologs #419. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 D.mojavensis:349

A8IYU6              	100.00%		B4L5E6              	100.00%
A8IYU5              	30.67%		
Bootstrap support for A8IYU6 as seed ortholog is 100%.
Bootstrap support for B4L5E6 as seed ortholog is 100%.

Group of orthologs #420. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 D.mojavensis:292

A8JCM8              	100.00%		B4K664              	100.00%
Bootstrap support for A8JCM8 as seed ortholog is 100%.
Bootstrap support for B4K664 as seed ortholog is 100%.

Group of orthologs #421. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 D.mojavensis:349

A8J7V3              	100.00%		B4KGL8              	100.00%
Bootstrap support for A8J7V3 as seed ortholog is 100%.
Bootstrap support for B4KGL8 as seed ortholog is 100%.

Group of orthologs #422. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 D.mojavensis:106

A8J195              	100.00%		B4KNI3              	100.00%
Bootstrap support for A8J195 as seed ortholog is 100%.
Bootstrap support for B4KNI3 as seed ortholog is 100%.

Group of orthologs #423. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 D.mojavensis:347

A8J4I7              	100.00%		B4KUS5              	100.00%
Bootstrap support for A8J4I7 as seed ortholog is 100%.
Bootstrap support for B4KUS5 as seed ortholog is 100%.

Group of orthologs #424. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 D.mojavensis:347

A8J9S9              	100.00%		B4L0A3              	100.00%
Bootstrap support for A8J9S9 as seed ortholog is 99%.
Bootstrap support for B4L0A3 as seed ortholog is 100%.

Group of orthologs #425. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 D.mojavensis:346

A8J8V5              	100.00%		B4KMJ2              	100.00%
Bootstrap support for A8J8V5 as seed ortholog is 100%.
Bootstrap support for B4KMJ2 as seed ortholog is 100%.

Group of orthologs #426. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:344 D.mojavensis:285

A8I9S6              	100.00%		B4KM96              	100.00%
Bootstrap support for A8I9S6 as seed ortholog is 100%.
Bootstrap support for B4KM96 as seed ortholog is 100%.

Group of orthologs #427. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:344 D.mojavensis:344

Q5G8B9              	100.00%		B4L7I2              	100.00%
Bootstrap support for Q5G8B9 as seed ortholog is 100%.
Bootstrap support for B4L7I2 as seed ortholog is 100%.

Group of orthologs #428. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 D.mojavensis:342

A8IWF2              	100.00%		B4KS80              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 100%.
Bootstrap support for B4KS80 as seed ortholog is 100%.

Group of orthologs #429. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 D.mojavensis:342

A8JHY6              	100.00%		B4KCZ2              	100.00%
Bootstrap support for A8JHY6 as seed ortholog is 100%.
Bootstrap support for B4KCZ2 as seed ortholog is 100%.

Group of orthologs #430. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 D.mojavensis:341

A8I5I0              	100.00%		B4K7G3              	100.00%
Bootstrap support for A8I5I0 as seed ortholog is 100%.
Bootstrap support for B4K7G3 as seed ortholog is 100%.

Group of orthologs #431. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 D.mojavensis:252

A8J755              	100.00%		B4KBA8              	100.00%
Bootstrap support for A8J755 as seed ortholog is 100%.
Bootstrap support for B4KBA8 as seed ortholog is 100%.

Group of orthologs #432. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 D.mojavensis:165

A8JA80              	100.00%		B4KC23              	100.00%
Bootstrap support for A8JA80 as seed ortholog is 100%.
Bootstrap support for B4KC23 as seed ortholog is 99%.

Group of orthologs #433. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 D.mojavensis:340

A8J5E0              	100.00%		B4KHS6              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 100%.
Bootstrap support for B4KHS6 as seed ortholog is 100%.

Group of orthologs #434. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 D.mojavensis:181

A8JBB8              	100.00%		B4L413              	100.00%
Bootstrap support for A8JBB8 as seed ortholog is 100%.
Bootstrap support for B4L413 as seed ortholog is 99%.

Group of orthologs #435. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 D.mojavensis:339

A8JBE4              	100.00%		B4KCW2              	100.00%
Bootstrap support for A8JBE4 as seed ortholog is 100%.
Bootstrap support for B4KCW2 as seed ortholog is 100%.

Group of orthologs #436. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:21

A8IKE3              	100.00%		B4KJ18              	100.00%
A8IKD6              	67.05%		
Q9FXT7              	25.91%		
Bootstrap support for A8IKE3 as seed ortholog is 99%.
Bootstrap support for B4KJ18 as seed ortholog is 71%.
Alternative seed ortholog is B4KIW9 (21 bits away from this cluster)

Group of orthologs #437. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 D.mojavensis:338

A8JCY4              	100.00%		B4KB24              	100.00%
Bootstrap support for A8JCY4 as seed ortholog is 84%.
Bootstrap support for B4KB24 as seed ortholog is 100%.

Group of orthologs #438. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 D.mojavensis:217

A8HSX7              	100.00%		B4KR00              	100.00%
A8IS13              	47.00%		
Bootstrap support for A8HSX7 as seed ortholog is 100%.
Bootstrap support for B4KR00 as seed ortholog is 100%.

Group of orthologs #439. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 D.mojavensis:337

A8I4P5              	100.00%		B4KAM6              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for B4KAM6 as seed ortholog is 100%.

Group of orthologs #440. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 D.mojavensis:337

A8JD83              	100.00%		B4K534              	100.00%
Bootstrap support for A8JD83 as seed ortholog is 100%.
Bootstrap support for B4K534 as seed ortholog is 100%.

Group of orthologs #441. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 D.mojavensis:337

A8IFG0              	100.00%		B4KSU5              	100.00%
Bootstrap support for A8IFG0 as seed ortholog is 100%.
Bootstrap support for B4KSU5 as seed ortholog is 100%.

Group of orthologs #442. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 D.mojavensis:337

A8J5R5              	100.00%		B4KQV2              	100.00%
Bootstrap support for A8J5R5 as seed ortholog is 100%.
Bootstrap support for B4KQV2 as seed ortholog is 100%.

Group of orthologs #443. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:191

A8J9W4              	100.00%		B4L699              	100.00%
Bootstrap support for A8J9W4 as seed ortholog is 99%.
Bootstrap support for B4L699 as seed ortholog is 100%.

Group of orthologs #444. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 D.mojavensis:259

A8HR57              	100.00%		B4KWX5              	100.00%
Bootstrap support for A8HR57 as seed ortholog is 100%.
Bootstrap support for B4KWX5 as seed ortholog is 100%.

Group of orthologs #445. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 D.mojavensis:275

A8J9H5              	100.00%		B4L5J3              	100.00%
Bootstrap support for A8J9H5 as seed ortholog is 99%.
Bootstrap support for B4L5J3 as seed ortholog is 100%.

Group of orthologs #446. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 D.mojavensis:334

A8JDY3              	100.00%		B4L6V2              	100.00%
Bootstrap support for A8JDY3 as seed ortholog is 100%.
Bootstrap support for B4L6V2 as seed ortholog is 100%.

Group of orthologs #447. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 D.mojavensis:118

A8HMC7              	100.00%		B4KQT5              	100.00%
Bootstrap support for A8HMC7 as seed ortholog is 73%.
Alternative seed ortholog is A8HSY5 (37 bits away from this cluster)
Bootstrap support for B4KQT5 as seed ortholog is 97%.

Group of orthologs #448. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 D.mojavensis:332

A8J506              	100.00%		B4KDF5              	100.00%
Bootstrap support for A8J506 as seed ortholog is 100%.
Bootstrap support for B4KDF5 as seed ortholog is 100%.

Group of orthologs #449. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 D.mojavensis:237

A8HT40              	100.00%		B4K614              	100.00%
Bootstrap support for A8HT40 as seed ortholog is 100%.
Bootstrap support for B4K614 as seed ortholog is 100%.

Group of orthologs #450. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 D.mojavensis:52

A8IEX1              	100.00%		B4L879              	100.00%
                    	       		B4L9J1              	6.45%
Bootstrap support for A8IEX1 as seed ortholog is 66%.
Alternative seed ortholog is A8IYC3 (14 bits away from this cluster)
Bootstrap support for B4L879 as seed ortholog is 99%.

Group of orthologs #451. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 D.mojavensis:329

A8JDV8              	100.00%		B4K7D0              	100.00%
Bootstrap support for A8JDV8 as seed ortholog is 100%.
Bootstrap support for B4K7D0 as seed ortholog is 100%.

Group of orthologs #452. Best score 328 bits
Score difference with first non-orthologous sequence - C.reinhardtii:328 D.mojavensis:328

A8HX04              	100.00%		B4KNG7              	100.00%
                    	       		B4L4D1              	9.82%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for B4KNG7 as seed ortholog is 100%.

Group of orthologs #453. Best score 328 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:43

A8JIS8              	100.00%		B4KG80              	100.00%
Bootstrap support for A8JIS8 as seed ortholog is 94%.
Bootstrap support for B4KG80 as seed ortholog is 86%.

Group of orthologs #454. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 D.mojavensis:236

A8J7U7              	100.00%		B4L2D9              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for B4L2D9 as seed ortholog is 100%.

Group of orthologs #455. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 D.mojavensis:325

A8IWJ3              	100.00%		B4KKP7              	100.00%
Bootstrap support for A8IWJ3 as seed ortholog is 100%.
Bootstrap support for B4KKP7 as seed ortholog is 100%.

Group of orthologs #456. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:118

A8JHQ7              	100.00%		B4KCV0              	100.00%
Bootstrap support for A8JHQ7 as seed ortholog is 100%.
Bootstrap support for B4KCV0 as seed ortholog is 100%.

Group of orthologs #457. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 D.mojavensis:34

A8IRX5              	100.00%		B4L1F0              	100.00%
Bootstrap support for A8IRX5 as seed ortholog is 100%.
Bootstrap support for B4L1F0 as seed ortholog is 96%.

Group of orthologs #458. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 D.mojavensis:325

A8JIP6              	100.00%		B4KQJ2              	100.00%
Bootstrap support for A8JIP6 as seed ortholog is 100%.
Bootstrap support for B4KQJ2 as seed ortholog is 100%.

Group of orthologs #459. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 D.mojavensis:324

A8JHX0              	100.00%		B4KS28              	100.00%
                    	       		B4KIB6              	10.42%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for B4KS28 as seed ortholog is 100%.

Group of orthologs #460. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 D.mojavensis:47

A8J6V1              	100.00%		B4KAP7              	100.00%
Bootstrap support for A8J6V1 as seed ortholog is 100%.
Bootstrap support for B4KAP7 as seed ortholog is 91%.

Group of orthologs #461. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:323 D.mojavensis:323

A8IAK4              	100.00%		B4KTC0              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 100%.
Bootstrap support for B4KTC0 as seed ortholog is 100%.

Group of orthologs #462. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 D.mojavensis:322

A8HS48              	100.00%		B4L7F0              	100.00%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for B4L7F0 as seed ortholog is 100%.

Group of orthologs #463. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 D.mojavensis:321

Q42690              	100.00%		B4KAK8              	100.00%
Bootstrap support for Q42690 as seed ortholog is 85%.
Bootstrap support for B4KAK8 as seed ortholog is 100%.

Group of orthologs #464. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:176

A8J5F6              	100.00%		B4L5D3              	100.00%
Bootstrap support for A8J5F6 as seed ortholog is 99%.
Bootstrap support for B4L5D3 as seed ortholog is 99%.

Group of orthologs #465. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:320

A8ILT7              	100.00%		B4L180              	100.00%
A8J399              	13.32%		
A8J0U2              	7.29%		
A8J0U4              	7.26%		
A8J0U0              	6.19%		
A8J0U1              	6.16%		
Bootstrap support for A8ILT7 as seed ortholog is 87%.
Bootstrap support for B4L180 as seed ortholog is 100%.

Group of orthologs #466. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 D.mojavensis:319

A8JAE8              	100.00%		B4L6W6              	100.00%
A8J9E5              	31.92%		
Bootstrap support for A8JAE8 as seed ortholog is 100%.
Bootstrap support for B4L6W6 as seed ortholog is 100%.

Group of orthologs #467. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 D.mojavensis:318

A8I161              	100.00%		B4KQG6              	100.00%
Bootstrap support for A8I161 as seed ortholog is 100%.
Bootstrap support for B4KQG6 as seed ortholog is 100%.

Group of orthologs #468. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:8

A8IL29              	100.00%		B4KYK8              	100.00%
Bootstrap support for A8IL29 as seed ortholog is 99%.
Bootstrap support for B4KYK8 as seed ortholog is 65%.
Alternative seed ortholog is B4L7F7 (8 bits away from this cluster)

Group of orthologs #469. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 D.mojavensis:239

A8HRR1              	100.00%		B4L9N9              	100.00%
Bootstrap support for A8HRR1 as seed ortholog is 100%.
Bootstrap support for B4L9N9 as seed ortholog is 100%.

Group of orthologs #470. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 D.mojavensis:23

A8ISU1              	100.00%		B4K5M8              	100.00%
Bootstrap support for A8ISU1 as seed ortholog is 100%.
Bootstrap support for B4K5M8 as seed ortholog is 77%.

Group of orthologs #471. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 D.mojavensis:317

A8J2J9              	100.00%		B4K8T3              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for B4K8T3 as seed ortholog is 100%.

Group of orthologs #472. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 D.mojavensis:317

A8J7D9              	100.00%		B4KD23              	100.00%
Bootstrap support for A8J7D9 as seed ortholog is 100%.
Bootstrap support for B4KD23 as seed ortholog is 100%.

Group of orthologs #473. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 D.mojavensis:57

A8JDN9              	100.00%		B4KHX1              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 100%.
Bootstrap support for B4KHX1 as seed ortholog is 95%.

Group of orthologs #474. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 D.mojavensis:315

A8J326              	100.00%		B4K712              	100.00%
Bootstrap support for A8J326 as seed ortholog is 100%.
Bootstrap support for B4K712 as seed ortholog is 100%.

Group of orthologs #475. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 D.mojavensis:314

Q84JV7              	100.00%		B4KHL8              	100.00%
Bootstrap support for Q84JV7 as seed ortholog is 100%.
Bootstrap support for B4KHL8 as seed ortholog is 100%.

Group of orthologs #476. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 D.mojavensis:184

A8IYT7              	100.00%		B4K658              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for B4K658 as seed ortholog is 100%.

Group of orthologs #477. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:312

A8IKQ0              	100.00%		B4KHW5              	100.00%
Bootstrap support for A8IKQ0 as seed ortholog is 100%.
Bootstrap support for B4KHW5 as seed ortholog is 100%.

Group of orthologs #478. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 D.mojavensis:312

A8J9B2              	100.00%		B4KY22              	100.00%
Bootstrap support for A8J9B2 as seed ortholog is 100%.
Bootstrap support for B4KY22 as seed ortholog is 100%.

Group of orthologs #479. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 D.mojavensis:215

A8J1B6              	100.00%		B4L7Y0              	100.00%
                    	       		B4L7X9              	54.84%
Bootstrap support for A8J1B6 as seed ortholog is 99%.
Bootstrap support for B4L7Y0 as seed ortholog is 100%.

Group of orthologs #480. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 D.mojavensis:266

A8J7D8              	100.00%		B4KEI5              	100.00%
Bootstrap support for A8J7D8 as seed ortholog is 100%.
Bootstrap support for B4KEI5 as seed ortholog is 100%.

Group of orthologs #481. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 D.mojavensis:80

A8IIK8              	100.00%		B4L5V3              	100.00%
Bootstrap support for A8IIK8 as seed ortholog is 99%.
Bootstrap support for B4L5V3 as seed ortholog is 75%.

Group of orthologs #482. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:63

A8JFV3              	100.00%		B4KNU1              	100.00%
Bootstrap support for A8JFV3 as seed ortholog is 99%.
Bootstrap support for B4KNU1 as seed ortholog is 98%.

Group of orthologs #483. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 D.mojavensis:251

A8JGW6              	100.00%		B4KSE9              	100.00%
Bootstrap support for A8JGW6 as seed ortholog is 100%.
Bootstrap support for B4KSE9 as seed ortholog is 100%.

Group of orthologs #484. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 D.mojavensis:311

A8JEG5              	100.00%		B4KWS2              	100.00%
Bootstrap support for A8JEG5 as seed ortholog is 100%.
Bootstrap support for B4KWS2 as seed ortholog is 100%.

Group of orthologs #485. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 D.mojavensis:269

A8J4X1              	100.00%		B4L5W3              	100.00%
Bootstrap support for A8J4X1 as seed ortholog is 100%.
Bootstrap support for B4L5W3 as seed ortholog is 100%.

Group of orthologs #486. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 D.mojavensis:50

A8JDQ7              	100.00%		B4KK75              	100.00%
A8J8T7              	47.20%		B4KHJ4              	10.38%
Bootstrap support for A8JDQ7 as seed ortholog is 66%.
Alternative seed ortholog is Q695H0 (22 bits away from this cluster)
Bootstrap support for B4KK75 as seed ortholog is 80%.

Group of orthologs #487. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 D.mojavensis:308

A8HTE5              	100.00%		B4KRA5              	100.00%
                    	       		B4KSK0              	31.91%
Bootstrap support for A8HTE5 as seed ortholog is 100%.
Bootstrap support for B4KRA5 as seed ortholog is 100%.

Group of orthologs #488. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 D.mojavensis:188

A8JI52              	100.00%		B4KMB2              	100.00%
Bootstrap support for A8JI52 as seed ortholog is 100%.
Bootstrap support for B4KMB2 as seed ortholog is 100%.

Group of orthologs #489. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 D.mojavensis:307

A8HR70              	100.00%		B4KRQ8              	100.00%
Bootstrap support for A8HR70 as seed ortholog is 100%.
Bootstrap support for B4KRQ8 as seed ortholog is 100%.

Group of orthologs #490. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 D.mojavensis:173

A8JG49              	100.00%		B4KZ75              	100.00%
Bootstrap support for A8JG49 as seed ortholog is 100%.
Bootstrap support for B4KZ75 as seed ortholog is 99%.

Group of orthologs #491. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 D.mojavensis:306

A8J2I5              	100.00%		B4L4S9              	100.00%
                    	       		B4K550              	38.73%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for B4L4S9 as seed ortholog is 100%.

Group of orthologs #492. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 D.mojavensis:306

A8IY94              	100.00%		B4KIN1              	100.00%
Bootstrap support for A8IY94 as seed ortholog is 100%.
Bootstrap support for B4KIN1 as seed ortholog is 100%.

Group of orthologs #493. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 D.mojavensis:306

A8J7I3              	100.00%		B4L164              	100.00%
Bootstrap support for A8J7I3 as seed ortholog is 100%.
Bootstrap support for B4L164 as seed ortholog is 100%.

Group of orthologs #494. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 D.mojavensis:305

A8ICN2              	100.00%		B4KGF0              	100.00%
A8HNN4              	49.63%		B4KS69              	25.12%
A8HNN6              	47.88%		
Bootstrap support for A8ICN2 as seed ortholog is 100%.
Bootstrap support for B4KGF0 as seed ortholog is 100%.

Group of orthologs #495. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 D.mojavensis:95

A8IQC5              	100.00%		B4KA93              	100.00%
Bootstrap support for A8IQC5 as seed ortholog is 99%.
Bootstrap support for B4KA93 as seed ortholog is 98%.

Group of orthologs #496. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 D.mojavensis:175

A8JD99              	100.00%		B4K4I1              	100.00%
Bootstrap support for A8JD99 as seed ortholog is 100%.
Bootstrap support for B4K4I1 as seed ortholog is 99%.

Group of orthologs #497. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 D.mojavensis:157

A8J1B4              	100.00%		B4KS71              	100.00%
                    	       		B4L1E4              	29.26%
                    	       		B4KE62              	26.80%
Bootstrap support for A8J1B4 as seed ortholog is 99%.
Bootstrap support for B4KS71 as seed ortholog is 99%.

Group of orthologs #498. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 D.mojavensis:304

A8J5W8              	100.00%		B4KDC2              	100.00%
Bootstrap support for A8J5W8 as seed ortholog is 100%.
Bootstrap support for B4KDC2 as seed ortholog is 100%.

Group of orthologs #499. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 D.mojavensis:304

A8JAA6              	100.00%		B4KEP8              	100.00%
Bootstrap support for A8JAA6 as seed ortholog is 100%.
Bootstrap support for B4KEP8 as seed ortholog is 100%.

Group of orthologs #500. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 D.mojavensis:304

A8JAY5              	100.00%		B4KTJ0              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for B4KTJ0 as seed ortholog is 100%.

Group of orthologs #501. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 D.mojavensis:184

A8J8S6              	100.00%		B4KZX2              	100.00%
Bootstrap support for A8J8S6 as seed ortholog is 100%.
Bootstrap support for B4KZX2 as seed ortholog is 99%.

Group of orthologs #502. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:232

A8IYJ4              	100.00%		B4KYD9              	100.00%
Bootstrap support for A8IYJ4 as seed ortholog is 92%.
Bootstrap support for B4KYD9 as seed ortholog is 100%.

Group of orthologs #503. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 D.mojavensis:301

A8HQP0              	100.00%		B4KMC1              	100.00%
                    	       		B4K4V1              	54.49%
Bootstrap support for A8HQP0 as seed ortholog is 100%.
Bootstrap support for B4KMC1 as seed ortholog is 100%.

Group of orthologs #504. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 D.mojavensis:301

A8IUL5              	100.00%		B4KBI8              	100.00%
Bootstrap support for A8IUL5 as seed ortholog is 100%.
Bootstrap support for B4KBI8 as seed ortholog is 100%.

Group of orthologs #505. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:116

A8IRT2              	100.00%		B4KDL7              	100.00%
Bootstrap support for A8IRT2 as seed ortholog is 100%.
Bootstrap support for B4KDL7 as seed ortholog is 100%.

Group of orthologs #506. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 D.mojavensis:164

A8IIN4              	100.00%		B4K5Z0              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 100%.
Bootstrap support for B4K5Z0 as seed ortholog is 99%.

Group of orthologs #507. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 D.mojavensis:300

A8IYL4              	100.00%		B4KLX3              	100.00%
Bootstrap support for A8IYL4 as seed ortholog is 100%.
Bootstrap support for B4KLX3 as seed ortholog is 100%.

Group of orthologs #508. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 D.mojavensis:300

A8JAW4              	100.00%		B4KV27              	100.00%
Bootstrap support for A8JAW4 as seed ortholog is 100%.
Bootstrap support for B4KV27 as seed ortholog is 100%.

Group of orthologs #509. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 D.mojavensis:61

O48949              	100.00%		B4L127              	100.00%
Bootstrap support for O48949 as seed ortholog is 100%.
Bootstrap support for B4L127 as seed ortholog is 87%.

Group of orthologs #510. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 D.mojavensis:112

A8IT96              	100.00%		B4KSY7              	100.00%
                    	       		B4KNY1              	32.53%
                    	       		B4L830              	15.56%
                    	       		B4L829              	13.54%
                    	       		B4KII7              	9.49%
Bootstrap support for A8IT96 as seed ortholog is 100%.
Bootstrap support for B4KSY7 as seed ortholog is 99%.

Group of orthologs #511. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 D.mojavensis:299

A8IR47              	100.00%		B4L9S0              	100.00%
Bootstrap support for A8IR47 as seed ortholog is 100%.
Bootstrap support for B4L9S0 as seed ortholog is 100%.

Group of orthologs #512. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 D.mojavensis:194

A8J435              	100.00%		B4L5Q4              	100.00%
                    	       		B4KQW2              	19.91%
Bootstrap support for A8J435 as seed ortholog is 99%.
Bootstrap support for B4L5Q4 as seed ortholog is 99%.

Group of orthologs #513. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:149

A8HN42              	100.00%		B4KJL2              	100.00%
Bootstrap support for A8HN42 as seed ortholog is 100%.
Bootstrap support for B4KJL2 as seed ortholog is 100%.

Group of orthologs #514. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 D.mojavensis:297

A8IEL8              	100.00%		B4KUB2              	100.00%
                    	       		B4KNA0              	52.41%
                    	       		B4KN47              	47.36%
Bootstrap support for A8IEL8 as seed ortholog is 100%.
Bootstrap support for B4KUB2 as seed ortholog is 100%.

Group of orthologs #515. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 D.mojavensis:297

A8J7N7              	100.00%		B4L2L0              	100.00%
Bootstrap support for A8J7N7 as seed ortholog is 100%.
Bootstrap support for B4L2L0 as seed ortholog is 100%.

Group of orthologs #516. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:296 D.mojavensis:136

A8JEW4              	100.00%		B4K880              	100.00%
Bootstrap support for A8JEW4 as seed ortholog is 100%.
Bootstrap support for B4K880 as seed ortholog is 100%.

Group of orthologs #517. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 D.mojavensis:295

A8IAX2              	100.00%		B4KRJ8              	100.00%
Bootstrap support for A8IAX2 as seed ortholog is 100%.
Bootstrap support for B4KRJ8 as seed ortholog is 100%.

Group of orthologs #518. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 D.mojavensis:295

A8HYG6              	100.00%		B4L0U2              	100.00%
Bootstrap support for A8HYG6 as seed ortholog is 100%.
Bootstrap support for B4L0U2 as seed ortholog is 100%.

Group of orthologs #519. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 D.mojavensis:294

A8JBN5              	100.00%		B4KCP8              	100.00%
                    	       		B4L2L4              	35.89%
Bootstrap support for A8JBN5 as seed ortholog is 100%.
Bootstrap support for B4KCP8 as seed ortholog is 100%.

Group of orthologs #520. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 D.mojavensis:294

A8HUT2              	100.00%		B4KPP7              	100.00%
Bootstrap support for A8HUT2 as seed ortholog is 100%.
Bootstrap support for B4KPP7 as seed ortholog is 100%.

Group of orthologs #521. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 D.mojavensis:294

A8ICL5              	100.00%		B4KJ40              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 100%.
Bootstrap support for B4KJ40 as seed ortholog is 100%.

Group of orthologs #522. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 D.mojavensis:294

A8J6P3              	100.00%		B4KJF9              	100.00%
Bootstrap support for A8J6P3 as seed ortholog is 100%.
Bootstrap support for B4KJF9 as seed ortholog is 100%.

Group of orthologs #523. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 D.mojavensis:294

A8J0V5              	100.00%		B4L3J9              	100.00%
Bootstrap support for A8J0V5 as seed ortholog is 100%.
Bootstrap support for B4L3J9 as seed ortholog is 100%.

Group of orthologs #524. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 D.mojavensis:229

A8IL38              	100.00%		B4KDM0              	100.00%
Bootstrap support for A8IL38 as seed ortholog is 100%.
Bootstrap support for B4KDM0 as seed ortholog is 100%.

Group of orthologs #525. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 D.mojavensis:246

A8IWL4              	100.00%		B4KGX9              	100.00%
Bootstrap support for A8IWL4 as seed ortholog is 100%.
Bootstrap support for B4KGX9 as seed ortholog is 100%.

Group of orthologs #526. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 D.mojavensis:246

A8J633              	100.00%		B4KKG3              	100.00%
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for B4KKG3 as seed ortholog is 100%.

Group of orthologs #527. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 D.mojavensis:292

A8I2D8              	100.00%		B4K8I7              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for B4K8I7 as seed ortholog is 100%.

Group of orthologs #528. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 D.mojavensis:207

A8JHW6              	100.00%		B4L5U2              	100.00%
Bootstrap support for A8JHW6 as seed ortholog is 100%.
Bootstrap support for B4L5U2 as seed ortholog is 99%.

Group of orthologs #529. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:291 D.mojavensis:291

A8IRU1              	100.00%		B4L0N7              	100.00%
                    	       		B4KS63              	9.09%
Bootstrap support for A8IRU1 as seed ortholog is 100%.
Bootstrap support for B4L0N7 as seed ortholog is 100%.

Group of orthologs #530. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 D.mojavensis:290

A8J0I7              	100.00%		B4KDE8              	100.00%
Bootstrap support for A8J0I7 as seed ortholog is 100%.
Bootstrap support for B4KDE8 as seed ortholog is 100%.

Group of orthologs #531. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 D.mojavensis:156

A8J6K9              	100.00%		B4KR02              	100.00%
Bootstrap support for A8J6K9 as seed ortholog is 100%.
Bootstrap support for B4KR02 as seed ortholog is 100%.

Group of orthologs #532. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 D.mojavensis:290

A8J6Z3              	100.00%		B4L488              	100.00%
Bootstrap support for A8J6Z3 as seed ortholog is 100%.
Bootstrap support for B4L488 as seed ortholog is 100%.

Group of orthologs #533. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 D.mojavensis:289

A8J7E8              	100.00%		B4KQ78              	100.00%
A8JA94              	48.15%		
Bootstrap support for A8J7E8 as seed ortholog is 100%.
Bootstrap support for B4KQ78 as seed ortholog is 100%.

Group of orthologs #534. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 D.mojavensis:289

A8JBH0              	100.00%		B4L667              	100.00%
                    	       		B4L6K4              	7.41%
Bootstrap support for A8JBH0 as seed ortholog is 87%.
Bootstrap support for B4L667 as seed ortholog is 100%.

Group of orthologs #535. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 D.mojavensis:289

A8HTX3              	100.00%		B4KC24              	100.00%
Bootstrap support for A8HTX3 as seed ortholog is 100%.
Bootstrap support for B4KC24 as seed ortholog is 100%.

Group of orthologs #536. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 D.mojavensis:289

A8JB76              	100.00%		B4KK01              	100.00%
Bootstrap support for A8JB76 as seed ortholog is 100%.
Bootstrap support for B4KK01 as seed ortholog is 100%.

Group of orthologs #537. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 D.mojavensis:289

A8J5Z0              	100.00%		B4KV97              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 100%.
Bootstrap support for B4KV97 as seed ortholog is 100%.

Group of orthologs #538. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 D.mojavensis:288

A8J6N3              	100.00%		B4L7Z3              	100.00%
                    	       		B4L012              	17.26%
Bootstrap support for A8J6N3 as seed ortholog is 100%.
Bootstrap support for B4L7Z3 as seed ortholog is 100%.

Group of orthologs #539. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 D.mojavensis:287

A8IL68              	100.00%		B4KDU9              	100.00%
Bootstrap support for A8IL68 as seed ortholog is 100%.
Bootstrap support for B4KDU9 as seed ortholog is 100%.

Group of orthologs #540. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 D.mojavensis:81

A8IJX8              	100.00%		B4KTN6              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for B4KTN6 as seed ortholog is 99%.

Group of orthologs #541. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 D.mojavensis:287

A8ILL5              	100.00%		B4L5N5              	100.00%
Bootstrap support for A8ILL5 as seed ortholog is 100%.
Bootstrap support for B4L5N5 as seed ortholog is 100%.

Group of orthologs #542. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 D.mojavensis:287

A8J980              	100.00%		B4KS34              	100.00%
Bootstrap support for A8J980 as seed ortholog is 100%.
Bootstrap support for B4KS34 as seed ortholog is 100%.

Group of orthologs #543. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:286

A8IXB8              	100.00%		B4KTG7              	100.00%
Bootstrap support for A8IXB8 as seed ortholog is 99%.
Bootstrap support for B4KTG7 as seed ortholog is 100%.

Group of orthologs #544. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 D.mojavensis:286

A8JAP4              	100.00%		B4L5P4              	100.00%
Bootstrap support for A8JAP4 as seed ortholog is 100%.
Bootstrap support for B4L5P4 as seed ortholog is 100%.

Group of orthologs #545. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 D.mojavensis:74

A8I3T3              	100.00%		B4K5C9              	100.00%
Bootstrap support for A8I3T3 as seed ortholog is 100%.
Bootstrap support for B4K5C9 as seed ortholog is 99%.

Group of orthologs #546. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 D.mojavensis:285

A8J8C1              	100.00%		B4KHR7              	100.00%
Bootstrap support for A8J8C1 as seed ortholog is 100%.
Bootstrap support for B4KHR7 as seed ortholog is 100%.

Group of orthologs #547. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 D.mojavensis:125

A8J2W1              	100.00%		B4KN81              	100.00%
Bootstrap support for A8J2W1 as seed ortholog is 100%.
Bootstrap support for B4KN81 as seed ortholog is 99%.

Group of orthologs #548. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:148

A8ICB3              	100.00%		B4KXM3              	100.00%
                    	       		B4L237              	17.49%
Bootstrap support for A8ICB3 as seed ortholog is 100%.
Bootstrap support for B4KXM3 as seed ortholog is 100%.

Group of orthologs #549. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:284

A8HWI3              	100.00%		B4KCS8              	100.00%
Bootstrap support for A8HWI3 as seed ortholog is 100%.
Bootstrap support for B4KCS8 as seed ortholog is 100%.

Group of orthologs #550. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:284

A8IZK3              	100.00%		B4KAU3              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for B4KAU3 as seed ortholog is 100%.

Group of orthologs #551. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:284

A8I8J2              	100.00%		B4KQJ9              	100.00%
Bootstrap support for A8I8J2 as seed ortholog is 100%.
Bootstrap support for B4KQJ9 as seed ortholog is 100%.

Group of orthologs #552. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:156

A8ID63              	100.00%		B4KRH9              	100.00%
Bootstrap support for A8ID63 as seed ortholog is 100%.
Bootstrap support for B4KRH9 as seed ortholog is 100%.

Group of orthologs #553. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:284

A8JF83              	100.00%		B4KD89              	100.00%
Bootstrap support for A8JF83 as seed ortholog is 100%.
Bootstrap support for B4KD89 as seed ortholog is 100%.

Group of orthologs #554. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 D.mojavensis:284

A8JAT8              	100.00%		B4KW25              	100.00%
Bootstrap support for A8JAT8 as seed ortholog is 100%.
Bootstrap support for B4KW25 as seed ortholog is 100%.

Group of orthologs #555. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:283

A8IXQ0              	100.00%		B4KFU7              	100.00%
Bootstrap support for A8IXQ0 as seed ortholog is 99%.
Bootstrap support for B4KFU7 as seed ortholog is 100%.

Group of orthologs #556. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 D.mojavensis:283

A8IX41              	100.00%		B4KR78              	100.00%
Bootstrap support for A8IX41 as seed ortholog is 100%.
Bootstrap support for B4KR78 as seed ortholog is 100%.

Group of orthologs #557. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 D.mojavensis:282

A8IXF4              	100.00%		B4KJL6              	100.00%
Bootstrap support for A8IXF4 as seed ortholog is 100%.
Bootstrap support for B4KJL6 as seed ortholog is 100%.

Group of orthologs #558. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:90

A8J8H3              	100.00%		B4KAN3              	100.00%
Bootstrap support for A8J8H3 as seed ortholog is 92%.
Bootstrap support for B4KAN3 as seed ortholog is 97%.

Group of orthologs #559. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 D.mojavensis:282

A8J426              	100.00%		B4KF31              	100.00%
Bootstrap support for A8J426 as seed ortholog is 100%.
Bootstrap support for B4KF31 as seed ortholog is 100%.

Group of orthologs #560. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:48

A8IYY0              	100.00%		B4KTF0              	100.00%
Bootstrap support for A8IYY0 as seed ortholog is 97%.
Bootstrap support for B4KTF0 as seed ortholog is 91%.

Group of orthologs #561. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 D.mojavensis:282

A8IWT5              	100.00%		B4L5V1              	100.00%
Bootstrap support for A8IWT5 as seed ortholog is 100%.
Bootstrap support for B4L5V1 as seed ortholog is 100%.

Group of orthologs #562. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 D.mojavensis:282

A8J567              	100.00%		B4L6F0              	100.00%
Bootstrap support for A8J567 as seed ortholog is 100%.
Bootstrap support for B4L6F0 as seed ortholog is 100%.

Group of orthologs #563. Best score 281 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 D.mojavensis:197

A8I1A7              	100.00%		B4KUC4              	100.00%
                    	       		B4KS53              	19.44%
Bootstrap support for A8I1A7 as seed ortholog is 100%.
Bootstrap support for B4KUC4 as seed ortholog is 100%.

Group of orthologs #564. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 D.mojavensis:280

A8I9G5              	100.00%		B4K9E7              	100.00%
Bootstrap support for A8I9G5 as seed ortholog is 100%.
Bootstrap support for B4K9E7 as seed ortholog is 100%.

Group of orthologs #565. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 D.mojavensis:235

A8I8V6              	100.00%		B4KMS5              	100.00%
Bootstrap support for A8I8V6 as seed ortholog is 100%.
Bootstrap support for B4KMS5 as seed ortholog is 100%.

Group of orthologs #566. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 D.mojavensis:55

A8HTN0              	100.00%		B4KWC8              	100.00%
Bootstrap support for A8HTN0 as seed ortholog is 96%.
Bootstrap support for B4KWC8 as seed ortholog is 91%.

Group of orthologs #567. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 D.mojavensis:280

A8IDI5              	100.00%		B4KYL1              	100.00%
Bootstrap support for A8IDI5 as seed ortholog is 100%.
Bootstrap support for B4KYL1 as seed ortholog is 100%.

Group of orthologs #568. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:280

A8JJ26              	100.00%		B4KIH8              	100.00%
Bootstrap support for A8JJ26 as seed ortholog is 99%.
Bootstrap support for B4KIH8 as seed ortholog is 100%.

Group of orthologs #569. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:133

A8I6Y0              	100.00%		B4KFI3              	100.00%
Bootstrap support for A8I6Y0 as seed ortholog is 99%.
Bootstrap support for B4KFI3 as seed ortholog is 99%.

Group of orthologs #570. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:279

A8HPC8              	100.00%		B4L1I5              	100.00%
Bootstrap support for A8HPC8 as seed ortholog is 99%.
Bootstrap support for B4L1I5 as seed ortholog is 100%.

Group of orthologs #571. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 D.mojavensis:47

A8HQI6              	100.00%		B4L7P9              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 100%.
Bootstrap support for B4L7P9 as seed ortholog is 94%.

Group of orthologs #572. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 D.mojavensis:279

A8JCJ2              	100.00%		B4KEW5              	100.00%
Bootstrap support for A8JCJ2 as seed ortholog is 100%.
Bootstrap support for B4KEW5 as seed ortholog is 100%.

Group of orthologs #573. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 D.mojavensis:204

A8IZG4              	100.00%		B4KTK4              	100.00%
Bootstrap support for A8IZG4 as seed ortholog is 99%.
Bootstrap support for B4KTK4 as seed ortholog is 100%.

Group of orthologs #574. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 D.mojavensis:279

A8I629              	100.00%		B4L9J7              	100.00%
Bootstrap support for A8I629 as seed ortholog is 100%.
Bootstrap support for B4L9J7 as seed ortholog is 100%.

Group of orthologs #575. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 D.mojavensis:279

A8IZL5              	100.00%		B4L0M6              	100.00%
Bootstrap support for A8IZL5 as seed ortholog is 99%.
Bootstrap support for B4L0M6 as seed ortholog is 100%.

Group of orthologs #576. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 D.mojavensis:279

A8JCT4              	100.00%		B4L817              	100.00%
Bootstrap support for A8JCT4 as seed ortholog is 100%.
Bootstrap support for B4L817 as seed ortholog is 100%.

Group of orthologs #577. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 D.mojavensis:223

A8I982              	100.00%		B4K4E7              	100.00%
Bootstrap support for A8I982 as seed ortholog is 100%.
Bootstrap support for B4K4E7 as seed ortholog is 100%.

Group of orthologs #578. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 D.mojavensis:278

A8IWV3              	100.00%		B4K5A9              	100.00%
Bootstrap support for A8IWV3 as seed ortholog is 100%.
Bootstrap support for B4K5A9 as seed ortholog is 100%.

Group of orthologs #579. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 D.mojavensis:278

A8ITQ5              	100.00%		B4KCY3              	100.00%
Bootstrap support for A8ITQ5 as seed ortholog is 100%.
Bootstrap support for B4KCY3 as seed ortholog is 100%.

Group of orthologs #580. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 D.mojavensis:278

A8IWP9              	100.00%		B4KUB7              	100.00%
Bootstrap support for A8IWP9 as seed ortholog is 100%.
Bootstrap support for B4KUB7 as seed ortholog is 100%.

Group of orthologs #581. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 D.mojavensis:277

A8IX13              	100.00%		B4K9V7              	100.00%
Bootstrap support for A8IX13 as seed ortholog is 100%.
Bootstrap support for B4K9V7 as seed ortholog is 100%.

Group of orthologs #582. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 D.mojavensis:277

A8IWM5              	100.00%		B4KML2              	100.00%
Bootstrap support for A8IWM5 as seed ortholog is 100%.
Bootstrap support for B4KML2 as seed ortholog is 100%.

Group of orthologs #583. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:52

A8IZJ9              	100.00%		B4L1F1              	100.00%
Bootstrap support for A8IZJ9 as seed ortholog is 87%.
Bootstrap support for B4L1F1 as seed ortholog is 94%.

Group of orthologs #584. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 D.mojavensis:276

Q8LKK4              	100.00%		B4L5F9              	100.00%
                    	       		B4KS23              	44.60%
Bootstrap support for Q8LKK4 as seed ortholog is 100%.
Bootstrap support for B4L5F9 as seed ortholog is 100%.

Group of orthologs #585. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 D.mojavensis:276

A8J7F8              	100.00%		B4K9D3              	100.00%
Bootstrap support for A8J7F8 as seed ortholog is 100%.
Bootstrap support for B4K9D3 as seed ortholog is 100%.

Group of orthologs #586. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 D.mojavensis:142

A8ICW2              	100.00%		B4KV29              	100.00%
                    	       		B4KIK3              	33.41%
                    	       		B4L279              	32.06%
Bootstrap support for A8ICW2 as seed ortholog is 99%.
Bootstrap support for B4KV29 as seed ortholog is 73%.
Alternative seed ortholog is B4KGM6 (142 bits away from this cluster)

Group of orthologs #587. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 D.mojavensis:179

A8IVS6              	100.00%		B4KC88              	100.00%
Bootstrap support for A8IVS6 as seed ortholog is 100%.
Bootstrap support for B4KC88 as seed ortholog is 99%.

Group of orthologs #588. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 D.mojavensis:275

A8JCS3              	100.00%		B4KXR0              	100.00%
Bootstrap support for A8JCS3 as seed ortholog is 100%.
Bootstrap support for B4KXR0 as seed ortholog is 100%.

Group of orthologs #589. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:130

A8JFP3              	100.00%		B4L5N0              	100.00%
Bootstrap support for A8JFP3 as seed ortholog is 99%.
Bootstrap support for B4L5N0 as seed ortholog is 99%.

Group of orthologs #590. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 D.mojavensis:274

A8ISG1              	100.00%		B4KUG0              	100.00%
Bootstrap support for A8ISG1 as seed ortholog is 100%.
Bootstrap support for B4KUG0 as seed ortholog is 100%.

Group of orthologs #591. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 D.mojavensis:274

A8J7Y2              	100.00%		B4KI53              	100.00%
Bootstrap support for A8J7Y2 as seed ortholog is 100%.
Bootstrap support for B4KI53 as seed ortholog is 100%.

Group of orthologs #592. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 D.mojavensis:273

Q6V9B0              	100.00%		B4KPX0              	100.00%
                    	       		B4KJB8              	34.76%
Bootstrap support for Q6V9B0 as seed ortholog is 100%.
Bootstrap support for B4KPX0 as seed ortholog is 100%.

Group of orthologs #593. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 D.mojavensis:190

A8HYQ9              	100.00%		B4KHH1              	100.00%
Bootstrap support for A8HYQ9 as seed ortholog is 100%.
Bootstrap support for B4KHH1 as seed ortholog is 100%.

Group of orthologs #594. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 D.mojavensis:101

A8I9B0              	100.00%		B4KSP9              	100.00%
Bootstrap support for A8I9B0 as seed ortholog is 100%.
Bootstrap support for B4KSP9 as seed ortholog is 99%.

Group of orthologs #595. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 D.mojavensis:273

A8I5X1              	100.00%		B4KYC8              	100.00%
Bootstrap support for A8I5X1 as seed ortholog is 100%.
Bootstrap support for B4KYC8 as seed ortholog is 100%.

Group of orthologs #596. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 D.mojavensis:272

A8J9P9              	100.00%		B4KUU2              	100.00%
Bootstrap support for A8J9P9 as seed ortholog is 100%.
Bootstrap support for B4KUU2 as seed ortholog is 100%.

Group of orthologs #597. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:271 D.mojavensis:271

A8HQD7              	100.00%		B4KUN0              	100.00%
                    	       		B4KWR4              	21.40%
                    	       		B4KW72              	19.73%
Bootstrap support for A8HQD7 as seed ortholog is 100%.
Bootstrap support for B4KUN0 as seed ortholog is 100%.

Group of orthologs #598. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:68

A8IDP6              	100.00%		B4KTM1              	100.00%
Bootstrap support for A8IDP6 as seed ortholog is 100%.
Bootstrap support for B4KTM1 as seed ortholog is 100%.

Group of orthologs #599. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 D.mojavensis:270

A8HYL2              	100.00%		B4KB53              	100.00%
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for B4KB53 as seed ortholog is 100%.

Group of orthologs #600. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 D.mojavensis:270

A8J0W9              	100.00%		B4KJ21              	100.00%
Bootstrap support for A8J0W9 as seed ortholog is 89%.
Bootstrap support for B4KJ21 as seed ortholog is 100%.

Group of orthologs #601. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 D.mojavensis:270

A8JGF8              	100.00%		B4KVS5              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 100%.
Bootstrap support for B4KVS5 as seed ortholog is 100%.

Group of orthologs #602. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:60

A8J0B6              	100.00%		B4KUQ9              	100.00%
                    	       		B4KUR0              	18.11%
                    	       		B4L0R6              	11.02%
                    	       		B4KXT7              	7.35%
Bootstrap support for A8J0B6 as seed ortholog is 99%.
Bootstrap support for B4KUQ9 as seed ortholog is 95%.

Group of orthologs #603. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 D.mojavensis:269

A8I0J4              	100.00%		B4KEZ6              	100.00%
                    	       		B4KF87              	6.83%
Bootstrap support for A8I0J4 as seed ortholog is 100%.
Bootstrap support for B4KEZ6 as seed ortholog is 100%.

Group of orthologs #604. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 D.mojavensis:185

A8ITA7              	100.00%		B4KFU4              	100.00%
Bootstrap support for A8ITA7 as seed ortholog is 100%.
Bootstrap support for B4KFU4 as seed ortholog is 100%.

Group of orthologs #605. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 D.mojavensis:105

A8HYD8              	100.00%		B4KXI5              	100.00%
Bootstrap support for A8HYD8 as seed ortholog is 100%.
Bootstrap support for B4KXI5 as seed ortholog is 99%.

Group of orthologs #606. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:116

A8IMW9              	100.00%		B4KV95              	100.00%
Bootstrap support for A8IMW9 as seed ortholog is 99%.
Bootstrap support for B4KV95 as seed ortholog is 99%.

Group of orthologs #607. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 D.mojavensis:269

A8IRL9              	100.00%		B4KWY0              	100.00%
Bootstrap support for A8IRL9 as seed ortholog is 100%.
Bootstrap support for B4KWY0 as seed ortholog is 100%.

Group of orthologs #608. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:34

A8J4N7              	100.00%		B4KLS7              	100.00%
Bootstrap support for A8J4N7 as seed ortholog is 96%.
Bootstrap support for B4KLS7 as seed ortholog is 85%.

Group of orthologs #609. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:177

A8IXD1              	100.00%		B4L0J3              	100.00%
                    	       		B4KDI3              	6.21%
Bootstrap support for A8IXD1 as seed ortholog is 100%.
Bootstrap support for B4L0J3 as seed ortholog is 99%.

Group of orthologs #610. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 D.mojavensis:268

Q94CJ2              	100.00%		B4KXC7              	100.00%
Q8RUE9              	65.42%		
Bootstrap support for Q94CJ2 as seed ortholog is 100%.
Bootstrap support for B4KXC7 as seed ortholog is 100%.

Group of orthologs #611. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 D.mojavensis:110

A8ILX2              	100.00%		B4K6V2              	100.00%
Bootstrap support for A8ILX2 as seed ortholog is 100%.
Bootstrap support for B4K6V2 as seed ortholog is 99%.

Group of orthologs #612. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:267

A8IAF5              	100.00%		B4KQ36              	100.00%
                    	       		B4KUE1              	36.12%
Bootstrap support for A8IAF5 as seed ortholog is 86%.
Bootstrap support for B4KQ36 as seed ortholog is 100%.

Group of orthologs #613. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 D.mojavensis:102

A8HPX2              	100.00%		B4KG74              	100.00%
Bootstrap support for A8HPX2 as seed ortholog is 95%.
Bootstrap support for B4KG74 as seed ortholog is 99%.

Group of orthologs #614. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 D.mojavensis:267

A8HN48              	100.00%		B4KVT9              	100.00%
Bootstrap support for A8HN48 as seed ortholog is 100%.
Bootstrap support for B4KVT9 as seed ortholog is 100%.

Group of orthologs #615. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:14

A8IBU9              	100.00%		B4KSZ2              	100.00%
Bootstrap support for A8IBU9 as seed ortholog is 99%.
Bootstrap support for B4KSZ2 as seed ortholog is 59%.
Alternative seed ortholog is B4L185 (14 bits away from this cluster)

Group of orthologs #616. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:138

A8I2S8              	100.00%		B4KYW3              	100.00%
Bootstrap support for A8I2S8 as seed ortholog is 100%.
Bootstrap support for B4KYW3 as seed ortholog is 99%.

Group of orthologs #617. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 D.mojavensis:1

A8I2V3              	100.00%		B4L6U4              	100.00%
Bootstrap support for A8I2V3 as seed ortholog is 84%.
Bootstrap support for B4L6U4 as seed ortholog is 49%.
Alternative seed ortholog is B4L925 (1 bits away from this cluster)

Group of orthologs #618. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 D.mojavensis:267

A8IB25              	100.00%		B4L760              	100.00%
Bootstrap support for A8IB25 as seed ortholog is 100%.
Bootstrap support for B4L760 as seed ortholog is 100%.

Group of orthologs #619. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 D.mojavensis:267

A8J6I6              	100.00%		B4L9D2              	100.00%
Bootstrap support for A8J6I6 as seed ortholog is 100%.
Bootstrap support for B4L9D2 as seed ortholog is 100%.

Group of orthologs #620. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:31

A8JB50              	100.00%		B4KY84              	100.00%
                    	       		B4KH13              	9.49%
Bootstrap support for A8JB50 as seed ortholog is 93%.
Bootstrap support for B4KY84 as seed ortholog is 82%.

Group of orthologs #621. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 D.mojavensis:151

A8IL60              	100.00%		B4KHG1              	100.00%
Bootstrap support for A8IL60 as seed ortholog is 100%.
Bootstrap support for B4KHG1 as seed ortholog is 99%.

Group of orthologs #622. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 D.mojavensis:80

A8IVC7              	100.00%		B4KGY7              	100.00%
Bootstrap support for A8IVC7 as seed ortholog is 55%.
Alternative seed ortholog is A8IEV8 (5 bits away from this cluster)
Bootstrap support for B4KGY7 as seed ortholog is 99%.

Group of orthologs #623. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:265

A8JGX0              	100.00%		B4K4E4              	100.00%
Bootstrap support for A8JGX0 as seed ortholog is 100%.
Bootstrap support for B4K4E4 as seed ortholog is 100%.

Group of orthologs #624. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 D.mojavensis:265

Q6V9B1              	100.00%		B4K671              	100.00%
Bootstrap support for Q6V9B1 as seed ortholog is 100%.
Bootstrap support for B4K671 as seed ortholog is 100%.

Group of orthologs #625. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:158

A8JDD2              	100.00%		B4L4S7              	100.00%
Bootstrap support for A8JDD2 as seed ortholog is 99%.
Bootstrap support for B4L4S7 as seed ortholog is 99%.

Group of orthologs #626. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 D.mojavensis:51

A8JD64              	100.00%		B4L5M3              	100.00%
                    	       		B4L1A2              	39.24%
                    	       		B4L0G5              	31.65%
                    	       		B4L199              	22.78%
Bootstrap support for A8JD64 as seed ortholog is 92%.
Bootstrap support for B4L5M3 as seed ortholog is 98%.

Group of orthologs #627. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:66

A8HUA1              	100.00%		B4K9M2              	100.00%
A8HUA7              	76.09%		
Bootstrap support for A8HUA1 as seed ortholog is 99%.
Bootstrap support for B4K9M2 as seed ortholog is 93%.

Group of orthologs #628. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 D.mojavensis:264

A8HTX4              	100.00%		B4KLC4              	100.00%
Bootstrap support for A8HTX4 as seed ortholog is 100%.
Bootstrap support for B4KLC4 as seed ortholog is 100%.

Group of orthologs #629. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 D.mojavensis:264

A8IA18              	100.00%		B4KQS7              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for B4KQS7 as seed ortholog is 100%.

Group of orthologs #630. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 D.mojavensis:264

A8JCH8              	100.00%		B4K7X1              	100.00%
Bootstrap support for A8JCH8 as seed ortholog is 100%.
Bootstrap support for B4K7X1 as seed ortholog is 100%.

Group of orthologs #631. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 D.mojavensis:262

A8IGJ8              	100.00%		B4K9K0              	100.00%
Bootstrap support for A8IGJ8 as seed ortholog is 100%.
Bootstrap support for B4K9K0 as seed ortholog is 100%.

Group of orthologs #632. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 D.mojavensis:262

A8IT87              	100.00%		B4K6L3              	100.00%
Bootstrap support for A8IT87 as seed ortholog is 100%.
Bootstrap support for B4K6L3 as seed ortholog is 100%.

Group of orthologs #633. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:13

A8J2Y5              	100.00%		B4KA15              	100.00%
Bootstrap support for A8J2Y5 as seed ortholog is 99%.
Bootstrap support for B4KA15 as seed ortholog is 65%.
Alternative seed ortholog is B4K7G9 (13 bits away from this cluster)

Group of orthologs #634. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:161

A8JC30              	100.00%		B4K729              	100.00%
Bootstrap support for A8JC30 as seed ortholog is 99%.
Bootstrap support for B4K729 as seed ortholog is 100%.

Group of orthologs #635. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:129

A8JBJ3              	100.00%		B4K908              	100.00%
Bootstrap support for A8JBJ3 as seed ortholog is 100%.
Bootstrap support for B4K908 as seed ortholog is 100%.

Group of orthologs #636. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 D.mojavensis:262

A8HM76              	100.00%		B4L5D4              	100.00%
Bootstrap support for A8HM76 as seed ortholog is 100%.
Bootstrap support for B4L5D4 as seed ortholog is 100%.

Group of orthologs #637. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:262

A8IWJ5              	100.00%		B4KTS7              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 99%.
Bootstrap support for B4KTS7 as seed ortholog is 100%.

Group of orthologs #638. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 D.mojavensis:262

A8J6L8              	100.00%		B4KM61              	100.00%
Bootstrap support for A8J6L8 as seed ortholog is 100%.
Bootstrap support for B4KM61 as seed ortholog is 100%.

Group of orthologs #639. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 D.mojavensis:262

A8IYH8              	100.00%		B4L0A6              	100.00%
Bootstrap support for A8IYH8 as seed ortholog is 100%.
Bootstrap support for B4L0A6 as seed ortholog is 100%.

Group of orthologs #640. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 D.mojavensis:262

A8JAX1              	100.00%		B4KSP3              	100.00%
Bootstrap support for A8JAX1 as seed ortholog is 99%.
Bootstrap support for B4KSP3 as seed ortholog is 100%.

Group of orthologs #641. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 D.mojavensis:54

A8J9T9              	100.00%		B4KWL2              	100.00%
Bootstrap support for A8J9T9 as seed ortholog is 98%.
Bootstrap support for B4KWL2 as seed ortholog is 93%.

Group of orthologs #642. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 D.mojavensis:261

A8HWK6              	100.00%		B4L3R7              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 100%.
Bootstrap support for B4L3R7 as seed ortholog is 100%.

Group of orthologs #643. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 D.mojavensis:260

A8J2C4              	100.00%		B4KHQ6              	100.00%
Bootstrap support for A8J2C4 as seed ortholog is 100%.
Bootstrap support for B4KHQ6 as seed ortholog is 100%.

Group of orthologs #644. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 D.mojavensis:260

A8J9V0              	100.00%		B4KDR2              	100.00%
Bootstrap support for A8J9V0 as seed ortholog is 100%.
Bootstrap support for B4KDR2 as seed ortholog is 100%.

Group of orthologs #645. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 D.mojavensis:260

A8J1G8              	100.00%		B4L818              	100.00%
Bootstrap support for A8J1G8 as seed ortholog is 100%.
Bootstrap support for B4L818 as seed ortholog is 100%.

Group of orthologs #646. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 D.mojavensis:116

A8JHB7              	100.00%		B4L268              	100.00%
                    	       		B4L259              	47.74%
                    	       		B4L267              	43.92%
                    	       		B4L265              	38.69%
                    	       		B4K6E6              	27.42%
                    	       		B4L261              	23.69%
                    	       		B4L271              	23.07%
                    	       		B4L270              	22.01%
                    	       		B4K6N7              	19.34%
                    	       		B4L273              	18.46%
                    	       		B4L272              	15.88%
                    	       		B4L264              	11.45%
                    	       		B4L263              	9.32%
Bootstrap support for A8JHB7 as seed ortholog is 100%.
Bootstrap support for B4L268 as seed ortholog is 98%.

Group of orthologs #647. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 D.mojavensis:259

A8IJK3              	100.00%		B4KQL3              	100.00%
Bootstrap support for A8IJK3 as seed ortholog is 100%.
Bootstrap support for B4KQL3 as seed ortholog is 100%.

Group of orthologs #648. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 D.mojavensis:258

A8J768              	100.00%		B4KU90              	100.00%
                    	       		B4L4Q3              	77.50%
                    	       		B4L542              	62.50%
Bootstrap support for A8J768 as seed ortholog is 100%.
Bootstrap support for B4KU90 as seed ortholog is 100%.

Group of orthologs #649. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 D.mojavensis:119

A8IVE2              	100.00%		B4KHK1              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for B4KHK1 as seed ortholog is 99%.

Group of orthologs #650. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 D.mojavensis:258

A8JBL6              	100.00%		B4KH24              	100.00%
Bootstrap support for A8JBL6 as seed ortholog is 100%.
Bootstrap support for B4KH24 as seed ortholog is 100%.

Group of orthologs #651. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 D.mojavensis:257

A8I4N9              	100.00%		B4KXS6              	100.00%
Bootstrap support for A8I4N9 as seed ortholog is 100%.
Bootstrap support for B4KXS6 as seed ortholog is 100%.

Group of orthologs #652. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 D.mojavensis:257

A8JCR0              	100.00%		B4KES0              	100.00%
Bootstrap support for A8JCR0 as seed ortholog is 100%.
Bootstrap support for B4KES0 as seed ortholog is 100%.

Group of orthologs #653. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8IWD2              	100.00%		B4KWZ6              	100.00%
Bootstrap support for A8IWD2 as seed ortholog is 100%.
Bootstrap support for B4KWZ6 as seed ortholog is 99%.

Group of orthologs #654. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 D.mojavensis:257

A8IPW4              	100.00%		B4L384              	100.00%
Bootstrap support for A8IPW4 as seed ortholog is 100%.
Bootstrap support for B4L384 as seed ortholog is 100%.

Group of orthologs #655. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 D.mojavensis:257

A8J825              	100.00%		B4KXL7              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for B4KXL7 as seed ortholog is 100%.

Group of orthologs #656. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:172

A8INH7              	100.00%		B4KS77              	100.00%
Bootstrap support for A8INH7 as seed ortholog is 100%.
Bootstrap support for B4KS77 as seed ortholog is 100%.

Group of orthologs #657. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:124

A8JFM7              	100.00%		B4KKN2              	100.00%
Bootstrap support for A8JFM7 as seed ortholog is 100%.
Bootstrap support for B4KKN2 as seed ortholog is 100%.

Group of orthologs #658. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:255

A8I7C5              	100.00%		B4KMJ9              	100.00%
                    	       		B4KMK1              	100.00%
Bootstrap support for A8I7C5 as seed ortholog is 95%.
Bootstrap support for B4KMJ9 as seed ortholog is 100%.
Bootstrap support for B4KMK1 as seed ortholog is 100%.

Group of orthologs #659. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 D.mojavensis:255

A8JFD5              	100.00%		B4KVP1              	100.00%
Bootstrap support for A8JFD5 as seed ortholog is 100%.
Bootstrap support for B4KVP1 as seed ortholog is 100%.

Group of orthologs #660. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:108

A8IRR7              	100.00%		B4L2M0              	100.00%
Bootstrap support for A8IRR7 as seed ortholog is 97%.
Bootstrap support for B4L2M0 as seed ortholog is 99%.

Group of orthologs #661. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 D.mojavensis:254

A8J9P4              	100.00%		B4KNE1              	100.00%
Bootstrap support for A8J9P4 as seed ortholog is 100%.
Bootstrap support for B4KNE1 as seed ortholog is 100%.

Group of orthologs #662. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:253

A8JII8              	100.00%		B4K953              	100.00%
                    	       		B4K954              	44.61%
Bootstrap support for A8JII8 as seed ortholog is 95%.
Bootstrap support for B4K953 as seed ortholog is 100%.

Group of orthologs #663. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:253

A8IZ93              	100.00%		B4KVU8              	100.00%
                    	       		B4K9I2              	8.48%
Bootstrap support for A8IZ93 as seed ortholog is 99%.
Bootstrap support for B4KVU8 as seed ortholog is 100%.

Group of orthologs #664. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 D.mojavensis:253

A8HVQ1              	100.00%		B4K5Z5              	100.00%
Bootstrap support for A8HVQ1 as seed ortholog is 100%.
Bootstrap support for B4K5Z5 as seed ortholog is 100%.

Group of orthologs #665. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 D.mojavensis:253

A8J2N5              	100.00%		B4KIA0              	100.00%
Bootstrap support for A8J2N5 as seed ortholog is 100%.
Bootstrap support for B4KIA0 as seed ortholog is 100%.

Group of orthologs #666. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:10

A8HSA7              	100.00%		B4K7B0              	100.00%
A8J9M0              	100.00%		B4KGS7              	53.85%
A8IK09              	83.33%		
A8HWY2              	66.67%		
Bootstrap support for A8HSA7 as seed ortholog is 99%.
Bootstrap support for A8J9M0 as seed ortholog is 99%.
Bootstrap support for B4K7B0 as seed ortholog is 79%.

Group of orthologs #667. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 D.mojavensis:252

A8HQ67              	100.00%		B4KHN3              	100.00%
                    	       		B4KRT2              	40.87%
                    	       		B4KRT1              	40.71%
                    	       		B4KAX6              	24.23%
Bootstrap support for A8HQ67 as seed ortholog is 100%.
Bootstrap support for B4KHN3 as seed ortholog is 100%.

Group of orthologs #668. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 D.mojavensis:59

A8HPW6              	100.00%		B4K750              	100.00%
Bootstrap support for A8HPW6 as seed ortholog is 100%.
Bootstrap support for B4K750 as seed ortholog is 71%.
Alternative seed ortholog is B4L9A7 (59 bits away from this cluster)

Group of orthologs #669. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 D.mojavensis:252

A8IGR4              	100.00%		B4K5S6              	100.00%
Bootstrap support for A8IGR4 as seed ortholog is 100%.
Bootstrap support for B4K5S6 as seed ortholog is 100%.

Group of orthologs #670. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:67

A8HYY4              	100.00%		B4KQZ7              	100.00%
Bootstrap support for A8HYY4 as seed ortholog is 95%.
Bootstrap support for B4KQZ7 as seed ortholog is 93%.

Group of orthologs #671. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:252

A8J8T9              	100.00%		B4K4R6              	100.00%
Bootstrap support for A8J8T9 as seed ortholog is 99%.
Bootstrap support for B4K4R6 as seed ortholog is 100%.

Group of orthologs #672. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 D.mojavensis:252

A8JHH1              	100.00%		B4KAN5              	100.00%
Bootstrap support for A8JHH1 as seed ortholog is 100%.
Bootstrap support for B4KAN5 as seed ortholog is 100%.

Group of orthologs #673. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 D.mojavensis:251

A8JGD1              	100.00%		B4K740              	100.00%
Q7XXT3              	25.11%		B4KAW1              	26.88%
                    	       		B4KAW2              	26.31%
Bootstrap support for A8JGD1 as seed ortholog is 100%.
Bootstrap support for B4K740 as seed ortholog is 100%.

Group of orthologs #674. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 D.mojavensis:74

A8HPM0              	100.00%		B4L1X1              	100.00%
                    	       		B4KN94              	9.24%
Bootstrap support for A8HPM0 as seed ortholog is 100%.
Bootstrap support for B4L1X1 as seed ortholog is 99%.

Group of orthologs #675. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:251

A8HNG4              	100.00%		B4KHS0              	100.00%
Bootstrap support for A8HNG4 as seed ortholog is 100%.
Bootstrap support for B4KHS0 as seed ortholog is 100%.

Group of orthologs #676. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 D.mojavensis:251

A8J8T5              	100.00%		B4KGN0              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for B4KGN0 as seed ortholog is 100%.

Group of orthologs #677. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 D.mojavensis:251

A8J3B4              	100.00%		B4KP19              	100.00%
Bootstrap support for A8J3B4 as seed ortholog is 100%.
Bootstrap support for B4KP19 as seed ortholog is 100%.

Group of orthologs #678. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

Q8LKG7              	100.00%		B4KE19              	100.00%
A8I780              	57.43%		
Bootstrap support for Q8LKG7 as seed ortholog is 100%.
Bootstrap support for B4KE19 as seed ortholog is 100%.

Group of orthologs #679. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:250

A8HM32              	100.00%		B4KPW0              	100.00%
Bootstrap support for A8HM32 as seed ortholog is 99%.
Bootstrap support for B4KPW0 as seed ortholog is 100%.

Group of orthologs #680. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

A8HYU2              	100.00%		B4KRS9              	100.00%
Bootstrap support for A8HYU2 as seed ortholog is 100%.
Bootstrap support for B4KRS9 as seed ortholog is 100%.

Group of orthologs #681. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:137

A8HTR9              	100.00%		B4L133              	100.00%
Bootstrap support for A8HTR9 as seed ortholog is 100%.
Bootstrap support for B4L133 as seed ortholog is 99%.

Group of orthologs #682. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:103

A8IRE2              	100.00%		B4KQ30              	100.00%
Bootstrap support for A8IRE2 as seed ortholog is 100%.
Bootstrap support for B4KQ30 as seed ortholog is 99%.

Group of orthologs #683. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

A8I7W6              	100.00%		B4L118              	100.00%
Bootstrap support for A8I7W6 as seed ortholog is 100%.
Bootstrap support for B4L118 as seed ortholog is 100%.

Group of orthologs #684. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

A8ITF3              	100.00%		B4KVE6              	100.00%
Bootstrap support for A8ITF3 as seed ortholog is 100%.
Bootstrap support for B4KVE6 as seed ortholog is 100%.

Group of orthologs #685. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

Q5S7Y5              	100.00%		B4K815              	100.00%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for B4K815 as seed ortholog is 100%.

Group of orthologs #686. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

A8JD76              	100.00%		B4KWK8              	100.00%
Bootstrap support for A8JD76 as seed ortholog is 100%.
Bootstrap support for B4KWK8 as seed ortholog is 100%.

Group of orthologs #687. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 D.mojavensis:250

A8J5P4              	100.00%		B4L8S7              	100.00%
Bootstrap support for A8J5P4 as seed ortholog is 100%.
Bootstrap support for B4L8S7 as seed ortholog is 100%.

Group of orthologs #688. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 D.mojavensis:249

A8HQY5              	100.00%		B4KNA3              	100.00%
Bootstrap support for A8HQY5 as seed ortholog is 100%.
Bootstrap support for B4KNA3 as seed ortholog is 100%.

Group of orthologs #689. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 D.mojavensis:138

A8IWB0              	100.00%		B4L2Q0              	100.00%
Bootstrap support for A8IWB0 as seed ortholog is 100%.
Bootstrap support for B4L2Q0 as seed ortholog is 99%.

Group of orthologs #690. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 D.mojavensis:163

A8J5M2              	100.00%		B4L644              	100.00%
Bootstrap support for A8J5M2 as seed ortholog is 100%.
Bootstrap support for B4L644 as seed ortholog is 99%.

Group of orthologs #691. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 D.mojavensis:87

A8HWI6              	100.00%		B4KBU9              	100.00%
Bootstrap support for A8HWI6 as seed ortholog is 100%.
Bootstrap support for B4KBU9 as seed ortholog is 99%.

Group of orthologs #692. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:122

A8IR89              	100.00%		B4K966              	100.00%
Bootstrap support for A8IR89 as seed ortholog is 100%.
Bootstrap support for B4K966 as seed ortholog is 100%.

Group of orthologs #693. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 D.mojavensis:248

A8JDN3              	100.00%		B4K9Z5              	100.00%
Bootstrap support for A8JDN3 as seed ortholog is 100%.
Bootstrap support for B4K9Z5 as seed ortholog is 100%.

Group of orthologs #694. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 D.mojavensis:248

A8J3T9              	100.00%		B4KJD9              	100.00%
Bootstrap support for A8J3T9 as seed ortholog is 100%.
Bootstrap support for B4KJD9 as seed ortholog is 100%.

Group of orthologs #695. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 D.mojavensis:248

Q84UB2              	100.00%		B4KF44              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for B4KF44 as seed ortholog is 100%.

Group of orthologs #696. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 D.mojavensis:247

A8IK69              	100.00%		B4K4Z1              	100.00%
                    	       		B4KCX2              	15.85%
Bootstrap support for A8IK69 as seed ortholog is 100%.
Bootstrap support for B4K4Z1 as seed ortholog is 100%.

Group of orthologs #697. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 D.mojavensis:247

A8JIU5              	100.00%		B4KXE3              	100.00%
                    	       		B4K5X5              	35.56%
Bootstrap support for A8JIU5 as seed ortholog is 100%.
Bootstrap support for B4KXE3 as seed ortholog is 100%.

Group of orthologs #698. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 D.mojavensis:247

A8HT69              	100.00%		B4L6C3              	100.00%
Bootstrap support for A8HT69 as seed ortholog is 100%.
Bootstrap support for B4L6C3 as seed ortholog is 100%.

Group of orthologs #699. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 D.mojavensis:154

A8HMJ8              	100.00%		B4KYL2              	100.00%
A8IHE7              	6.19%		B4L141              	33.23%
                    	       		B4KYL3              	22.01%
                    	       		B4L804              	20.75%
                    	       		B4KYY5              	18.24%
Bootstrap support for A8HMJ8 as seed ortholog is 100%.
Bootstrap support for B4KYL2 as seed ortholog is 99%.

Group of orthologs #700. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:246

A8I520              	100.00%		B4KR86              	100.00%
A8J1W3              	28.67%		
Bootstrap support for A8I520 as seed ortholog is 97%.
Bootstrap support for B4KR86 as seed ortholog is 100%.

Group of orthologs #701. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 D.mojavensis:246

A8I9K7              	100.00%		B4L8R1              	100.00%
                    	       		B4KS60              	37.44%
Bootstrap support for A8I9K7 as seed ortholog is 83%.
Bootstrap support for B4L8R1 as seed ortholog is 100%.

Group of orthologs #702. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:246

A8IW89              	100.00%		B4KGT2              	100.00%
Bootstrap support for A8IW89 as seed ortholog is 99%.
Bootstrap support for B4KGT2 as seed ortholog is 100%.

Group of orthologs #703. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 D.mojavensis:246

A8J9T2              	100.00%		B4KDF2              	100.00%
Bootstrap support for A8J9T2 as seed ortholog is 100%.
Bootstrap support for B4KDF2 as seed ortholog is 100%.

Group of orthologs #704. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 D.mojavensis:246

A8JGS3              	100.00%		B4KBV0              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for B4KBV0 as seed ortholog is 100%.

Group of orthologs #705. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 D.mojavensis:245

A8ICF1              	100.00%		B4KA71              	100.00%
Bootstrap support for A8ICF1 as seed ortholog is 100%.
Bootstrap support for B4KA71 as seed ortholog is 100%.

Group of orthologs #706. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 D.mojavensis:245

A8IC82              	100.00%		B4KPT0              	100.00%
Bootstrap support for A8IC82 as seed ortholog is 100%.
Bootstrap support for B4KPT0 as seed ortholog is 100%.

Group of orthologs #707. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 D.mojavensis:245

Q946G4              	100.00%		B4KHU3              	100.00%
Bootstrap support for Q946G4 as seed ortholog is 100%.
Bootstrap support for B4KHU3 as seed ortholog is 100%.

Group of orthologs #708. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 D.mojavensis:111

A8IN95              	100.00%		B4KJK6              	100.00%
                    	       		B4LB11              	29.67%
                    	       		B4KLA0              	21.66%
Bootstrap support for A8IN95 as seed ortholog is 100%.
Bootstrap support for B4KJK6 as seed ortholog is 99%.

Group of orthologs #709. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:195

A8J9Q3              	100.00%		B4K7X5              	100.00%
Bootstrap support for A8J9Q3 as seed ortholog is 100%.
Bootstrap support for B4K7X5 as seed ortholog is 100%.

Group of orthologs #710. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 D.mojavensis:244

A8J9D4              	100.00%		B4KJM4              	100.00%
Bootstrap support for A8J9D4 as seed ortholog is 100%.
Bootstrap support for B4KJM4 as seed ortholog is 100%.

Group of orthologs #711. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 D.mojavensis:243

Q8RUT6              	100.00%		B4K5V9              	100.00%
A8J1H0              	24.21%		
A8HSA2              	24.21%		
A8IUV9              	17.08%		
A8JFV7              	16.26%		
A8JFM1              	6.78%		
Bootstrap support for Q8RUT6 as seed ortholog is 100%.
Bootstrap support for B4K5V9 as seed ortholog is 100%.

Group of orthologs #712. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 D.mojavensis:177

A8I2J9              	100.00%		B4KD44              	100.00%
Bootstrap support for A8I2J9 as seed ortholog is 100%.
Bootstrap support for B4KD44 as seed ortholog is 100%.

Group of orthologs #713. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:55

A8IVQ7              	100.00%		B4KNJ0              	100.00%
Bootstrap support for A8IVQ7 as seed ortholog is 98%.
Bootstrap support for B4KNJ0 as seed ortholog is 98%.

Group of orthologs #714. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 D.mojavensis:243

A8JEP8              	100.00%		B4K9J3              	100.00%
Bootstrap support for A8JEP8 as seed ortholog is 100%.
Bootstrap support for B4K9J3 as seed ortholog is 100%.

Group of orthologs #715. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 D.mojavensis:243

A8JB47              	100.00%		B4KJJ5              	100.00%
Bootstrap support for A8JB47 as seed ortholog is 86%.
Bootstrap support for B4KJJ5 as seed ortholog is 100%.

Group of orthologs #716. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:243

A8JEQ4              	100.00%		B4KTF3              	100.00%
Bootstrap support for A8JEQ4 as seed ortholog is 99%.
Bootstrap support for B4KTF3 as seed ortholog is 100%.

Group of orthologs #717. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 D.mojavensis:242

A8J0M8              	100.00%		B4KM00              	100.00%
A8JA83              	6.50%		B4KAB9              	7.85%
Bootstrap support for A8J0M8 as seed ortholog is 100%.
Bootstrap support for B4KM00 as seed ortholog is 100%.

Group of orthologs #718. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:37

A8IYA3              	100.00%		B4K4H2              	100.00%
                    	       		B4KBQ4              	66.67%
Bootstrap support for A8IYA3 as seed ortholog is 100%.
Bootstrap support for B4K4H2 as seed ortholog is 95%.

Group of orthologs #719. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:115

A8JFI8              	100.00%		B4KDC5              	100.00%
Bootstrap support for A8JFI8 as seed ortholog is 99%.
Bootstrap support for B4KDC5 as seed ortholog is 100%.

Group of orthologs #720. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 D.mojavensis:67

A8IGP7              	100.00%		B4L168              	100.00%
A8JID7              	9.87%		
Bootstrap support for A8IGP7 as seed ortholog is 100%.
Bootstrap support for B4L168 as seed ortholog is 91%.

Group of orthologs #721. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 D.mojavensis:241

A8J218              	100.00%		B4K520              	100.00%
Bootstrap support for A8J218 as seed ortholog is 100%.
Bootstrap support for B4K520 as seed ortholog is 100%.

Group of orthologs #722. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 D.mojavensis:241

A8I9K8              	100.00%		B4KM92              	100.00%
Bootstrap support for A8I9K8 as seed ortholog is 100%.
Bootstrap support for B4KM92 as seed ortholog is 100%.

Group of orthologs #723. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 D.mojavensis:241

A8I665              	100.00%		B4L529              	100.00%
Bootstrap support for A8I665 as seed ortholog is 100%.
Bootstrap support for B4L529 as seed ortholog is 100%.

Group of orthologs #724. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 D.mojavensis:142

A8JCX9              	100.00%		B4KFP9              	100.00%
Bootstrap support for A8JCX9 as seed ortholog is 100%.
Bootstrap support for B4KFP9 as seed ortholog is 100%.

Group of orthologs #725. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:83

A8J876              	100.00%		B4L0G8              	100.00%
Bootstrap support for A8J876 as seed ortholog is 92%.
Bootstrap support for B4L0G8 as seed ortholog is 98%.

Group of orthologs #726. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 D.mojavensis:240

A8IS24              	100.00%		B4KVZ2              	100.00%
                    	       		B4L277              	49.94%
                    	       		B4KS81              	5.47%
Bootstrap support for A8IS24 as seed ortholog is 72%.
Alternative seed ortholog is A8J6G5 (32 bits away from this cluster)
Bootstrap support for B4KVZ2 as seed ortholog is 100%.

Group of orthologs #727. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 D.mojavensis:240

A8J8Y6              	100.00%		B4KAQ0              	100.00%
Bootstrap support for A8J8Y6 as seed ortholog is 100%.
Bootstrap support for B4KAQ0 as seed ortholog is 100%.

Group of orthologs #728. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 D.mojavensis:240

A8HY46              	100.00%		B4L5X3              	100.00%
Bootstrap support for A8HY46 as seed ortholog is 100%.
Bootstrap support for B4L5X3 as seed ortholog is 100%.

Group of orthologs #729. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 D.mojavensis:84

A8I0R6              	100.00%		B4L7C2              	100.00%
Bootstrap support for A8I0R6 as seed ortholog is 79%.
Bootstrap support for B4L7C2 as seed ortholog is 99%.

Group of orthologs #730. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 D.mojavensis:240

A8J805              	100.00%		B4KPZ3              	100.00%
Bootstrap support for A8J805 as seed ortholog is 100%.
Bootstrap support for B4KPZ3 as seed ortholog is 100%.

Group of orthologs #731. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 D.mojavensis:124

A8HQ77              	100.00%		B4K9D7              	100.00%
                    	       		B4L5L1              	92.86%
Bootstrap support for A8HQ77 as seed ortholog is 100%.
Bootstrap support for B4K9D7 as seed ortholog is 100%.

Group of orthologs #732. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 D.mojavensis:239

A8HPG2              	100.00%		B4KMY7              	100.00%
Bootstrap support for A8HPG2 as seed ortholog is 100%.
Bootstrap support for B4KMY7 as seed ortholog is 100%.

Group of orthologs #733. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 D.mojavensis:239

A8JAQ9              	100.00%		B4KXU2              	100.00%
Bootstrap support for A8JAQ9 as seed ortholog is 100%.
Bootstrap support for B4KXU2 as seed ortholog is 100%.

Group of orthologs #734. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 D.mojavensis:238

A8IA42              	100.00%		B4KTW4              	100.00%
A8JC21              	29.64%		
A8I9S9              	15.45%		
Bootstrap support for A8IA42 as seed ortholog is 100%.
Bootstrap support for B4KTW4 as seed ortholog is 100%.

Group of orthologs #735. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 D.mojavensis:238

A8IKZ2              	100.00%		B4KVR8              	100.00%
Bootstrap support for A8IKZ2 as seed ortholog is 100%.
Bootstrap support for B4KVR8 as seed ortholog is 100%.

Group of orthologs #736. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:91

A8JGI0              	100.00%		B4K9T8              	100.00%
Bootstrap support for A8JGI0 as seed ortholog is 99%.
Bootstrap support for B4K9T8 as seed ortholog is 99%.

Group of orthologs #737. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 D.mojavensis:238

A8JBS3              	100.00%		B4KJM2              	100.00%
Bootstrap support for A8JBS3 as seed ortholog is 100%.
Bootstrap support for B4KJM2 as seed ortholog is 100%.

Group of orthologs #738. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 D.mojavensis:25

A8IVK0              	100.00%		B4KYI0              	100.00%
Bootstrap support for A8IVK0 as seed ortholog is 96%.
Bootstrap support for B4KYI0 as seed ortholog is 86%.

Group of orthologs #739. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:238

A8JII0              	100.00%		B4KJD4              	100.00%
Bootstrap support for A8JII0 as seed ortholog is 99%.
Bootstrap support for B4KJD4 as seed ortholog is 100%.

Group of orthologs #740. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:238

A8J032              	100.00%		B4L6K5              	100.00%
Bootstrap support for A8J032 as seed ortholog is 99%.
Bootstrap support for B4L6K5 as seed ortholog is 100%.

Group of orthologs #741. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:237

A8IGT6              	100.00%		B4KFH5              	100.00%
Bootstrap support for A8IGT6 as seed ortholog is 97%.
Bootstrap support for B4KFH5 as seed ortholog is 100%.

Group of orthologs #742. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:237

A8I843              	100.00%		B4KMB5              	100.00%
Bootstrap support for A8I843 as seed ortholog is 100%.
Bootstrap support for B4KMB5 as seed ortholog is 100%.

Group of orthologs #743. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:237

A8I9R7              	100.00%		B4KM63              	100.00%
Bootstrap support for A8I9R7 as seed ortholog is 100%.
Bootstrap support for B4KM63 as seed ortholog is 100%.

Group of orthologs #744. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:237

A8JBN4              	100.00%		B4K623              	100.00%
Bootstrap support for A8JBN4 as seed ortholog is 100%.
Bootstrap support for B4K623 as seed ortholog is 100%.

Group of orthologs #745. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:237

A8HRV5              	100.00%		B4L7S6              	100.00%
Bootstrap support for A8HRV5 as seed ortholog is 100%.
Bootstrap support for B4L7S6 as seed ortholog is 100%.

Group of orthologs #746. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:110

A8IWQ2              	100.00%		B4KZ63              	100.00%
Bootstrap support for A8IWQ2 as seed ortholog is 100%.
Bootstrap support for B4KZ63 as seed ortholog is 96%.

Group of orthologs #747. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:237

A8IM30              	100.00%		B4L6Q4              	100.00%
Bootstrap support for A8IM30 as seed ortholog is 100%.
Bootstrap support for B4L6Q4 as seed ortholog is 100%.

Group of orthologs #748. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 D.mojavensis:237

A8JBD9              	100.00%		B4KXG2              	100.00%
Bootstrap support for A8JBD9 as seed ortholog is 100%.
Bootstrap support for B4KXG2 as seed ortholog is 100%.

Group of orthologs #749. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:236

A8IJF1              	100.00%		B4KWA2              	100.00%
Bootstrap support for A8IJF1 as seed ortholog is 99%.
Bootstrap support for B4KWA2 as seed ortholog is 100%.

Group of orthologs #750. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 D.mojavensis:236

A8J6E2              	100.00%		B4L4U6              	100.00%
Bootstrap support for A8J6E2 as seed ortholog is 100%.
Bootstrap support for B4L4U6 as seed ortholog is 100%.

Group of orthologs #751. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 D.mojavensis:72

A8IZ81              	100.00%		B4K7S0              	100.00%
A8JFB8              	8.73%		B4KGU9              	11.65%
                    	       		B4L6G2              	9.77%
                    	       		B4KSN5              	8.77%
                    	       		B4KPC7              	8.77%
                    	       		B4KJS0              	7.02%
                    	       		B4KPD2              	6.77%
                    	       		B4KPD1              	6.39%
                    	       		B4KGR0              	6.14%
                    	       		B4KPC6              	5.89%
                    	       		B4KPC8              	5.89%
                    	       		B4KPC9              	5.64%
                    	       		B4KPD0              	5.26%
                    	       		B4KQ37              	5.14%
Bootstrap support for A8IZ81 as seed ortholog is 62%.
Alternative seed ortholog is A8J0K6 (6 bits away from this cluster)
Bootstrap support for B4K7S0 as seed ortholog is 96%.

Group of orthologs #752. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 D.mojavensis:235

A8HXA9              	100.00%		B4KWQ0              	100.00%
                    	       		B4KV45              	24.85%
                    	       		B4KV41              	23.29%
                    	       		B4L5P5              	15.66%
Bootstrap support for A8HXA9 as seed ortholog is 100%.
Bootstrap support for B4KWQ0 as seed ortholog is 100%.

Group of orthologs #753. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:235

A8HQ81              	100.00%		B4KME8              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 100%.
Bootstrap support for B4KME8 as seed ortholog is 100%.

Group of orthologs #754. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:235

A8J5V8              	100.00%		B4KHT3              	100.00%
Bootstrap support for A8J5V8 as seed ortholog is 99%.
Bootstrap support for B4KHT3 as seed ortholog is 100%.

Group of orthologs #755. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:235

A8JH65              	100.00%		B4KBY8              	100.00%
Bootstrap support for A8JH65 as seed ortholog is 99%.
Bootstrap support for B4KBY8 as seed ortholog is 100%.

Group of orthologs #756. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:234

A8IYI0              	100.00%		B4KJH6              	100.00%
                    	       		B4L379              	31.94%
Bootstrap support for A8IYI0 as seed ortholog is 76%.
Bootstrap support for B4KJH6 as seed ortholog is 100%.

Group of orthologs #757. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 D.mojavensis:234

A8HQ97              	100.00%		B4KG56              	100.00%
Bootstrap support for A8HQ97 as seed ortholog is 100%.
Bootstrap support for B4KG56 as seed ortholog is 100%.

Group of orthologs #758. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 D.mojavensis:234

A8HXN9              	100.00%		B4KES8              	100.00%
Bootstrap support for A8HXN9 as seed ortholog is 100%.
Bootstrap support for B4KES8 as seed ortholog is 100%.

Group of orthologs #759. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 D.mojavensis:234

A8J5L0              	100.00%		B4K7F5              	100.00%
Bootstrap support for A8J5L0 as seed ortholog is 100%.
Bootstrap support for B4K7F5 as seed ortholog is 100%.

Group of orthologs #760. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 D.mojavensis:234

A8J597              	100.00%		B4KLX4              	100.00%
Bootstrap support for A8J597 as seed ortholog is 100%.
Bootstrap support for B4KLX4 as seed ortholog is 100%.

Group of orthologs #761. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:234

A8IJE8              	100.00%		B4L6D9              	100.00%
Bootstrap support for A8IJE8 as seed ortholog is 99%.
Bootstrap support for B4L6D9 as seed ortholog is 100%.

Group of orthologs #762. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:234

A8JGM8              	100.00%		B4KS92              	100.00%
Bootstrap support for A8JGM8 as seed ortholog is 94%.
Bootstrap support for B4KS92 as seed ortholog is 100%.

Group of orthologs #763. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:40

A8ISP5              	100.00%		B4L1P9              	100.00%
                    	       		B4KGG0              	8.09%
Bootstrap support for A8ISP5 as seed ortholog is 83%.
Bootstrap support for B4L1P9 as seed ortholog is 82%.

Group of orthologs #764. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:35

A8JHI5              	100.00%		B4L7W8              	100.00%
                    	       		B4L0W9              	24.57%
Bootstrap support for A8JHI5 as seed ortholog is 99%.
Bootstrap support for B4L7W8 as seed ortholog is 91%.

Group of orthologs #765. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:233

A8J7G9              	100.00%		B4K4I6              	100.00%
Bootstrap support for A8J7G9 as seed ortholog is 99%.
Bootstrap support for B4K4I6 as seed ortholog is 100%.

Group of orthologs #766. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 D.mojavensis:144

A8JET1              	100.00%		B4K4S4              	100.00%
Bootstrap support for A8JET1 as seed ortholog is 100%.
Bootstrap support for B4K4S4 as seed ortholog is 99%.

Group of orthologs #767. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 D.mojavensis:233

A8J5Q8              	100.00%		B4KHN4              	100.00%
Bootstrap support for A8J5Q8 as seed ortholog is 100%.
Bootstrap support for B4KHN4 as seed ortholog is 100%.

Group of orthologs #768. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:232

A8JEC6              	100.00%		B4L1S7              	100.00%
                    	       		B4L791              	15.55%
Bootstrap support for A8JEC6 as seed ortholog is 85%.
Bootstrap support for B4L1S7 as seed ortholog is 100%.

Group of orthologs #769. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:83

A8J9U3              	100.00%		B4K6D6              	100.00%
Bootstrap support for A8J9U3 as seed ortholog is 99%.
Bootstrap support for B4K6D6 as seed ortholog is 99%.

Group of orthologs #770. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 D.mojavensis:232

A8IJQ4              	100.00%		B4KRC2              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for B4KRC2 as seed ortholog is 100%.

Group of orthologs #771. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 D.mojavensis:232

A8J0Q5              	100.00%		B4KQQ4              	100.00%
Bootstrap support for A8J0Q5 as seed ortholog is 100%.
Bootstrap support for B4KQQ4 as seed ortholog is 100%.

Group of orthologs #772. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:33

A8I5R9              	100.00%		B4KNQ5              	20.38%
A8J7T7              	100.00%		B4KTB9              	100.00%
                    	       		B4L162              	13.87%
Bootstrap support for A8I5R9 as seed ortholog is 99%.
Bootstrap support for A8J7T7 as seed ortholog is 99%.
Bootstrap support for B4KTB9 as seed ortholog is 77%.

Group of orthologs #773. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 D.mojavensis:231

A8IC04              	100.00%		B4K967              	100.00%
Bootstrap support for A8IC04 as seed ortholog is 100%.
Bootstrap support for B4K967 as seed ortholog is 100%.

Group of orthologs #774. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:151

A8J3B0              	100.00%		B4KJ57              	100.00%
Bootstrap support for A8J3B0 as seed ortholog is 99%.
Bootstrap support for B4KJ57 as seed ortholog is 99%.

Group of orthologs #775. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 D.mojavensis:231

A8IYF1              	100.00%		B4KQ20              	100.00%
Bootstrap support for A8IYF1 as seed ortholog is 100%.
Bootstrap support for B4KQ20 as seed ortholog is 100%.

Group of orthologs #776. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:231 D.mojavensis:131

A8JAR5              	100.00%		B4L800              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for B4L800 as seed ortholog is 99%.

Group of orthologs #777. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:85

A8J114              	100.00%		B4KA10              	100.00%
                    	       		B4KA11              	53.43%
                    	       		B4KA02              	13.61%
                    	       		B4KUE8              	11.25%
                    	       		B4KRH4              	11.14%
                    	       		B4KJ01              	9.45%
                    	       		B4L9P9              	7.54%
Bootstrap support for A8J114 as seed ortholog is 99%.
Bootstrap support for B4KA10 as seed ortholog is 98%.

Group of orthologs #778. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 D.mojavensis:230

A8JGU7              	100.00%		B4L1J3              	100.00%
                    	       		B4KAK1              	32.41%
                    	       		B4KSA9              	29.53%
                    	       		B4KAK3              	14.19%
                    	       		B4KAK4              	13.96%
                    	       		B4KAK2              	12.80%
Bootstrap support for A8JGU7 as seed ortholog is 100%.
Bootstrap support for B4L1J3 as seed ortholog is 100%.

Group of orthologs #779. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 D.mojavensis:230

A8JF35              	100.00%		B4KD69              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for B4KD69 as seed ortholog is 100%.

Group of orthologs #780. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 D.mojavensis:230

A8ITI8              	100.00%		B4KXZ9              	100.00%
Bootstrap support for A8ITI8 as seed ortholog is 100%.
Bootstrap support for B4KXZ9 as seed ortholog is 100%.

Group of orthologs #781. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 D.mojavensis:230

A8IRY0              	100.00%		B4L8P8              	100.00%
Bootstrap support for A8IRY0 as seed ortholog is 100%.
Bootstrap support for B4L8P8 as seed ortholog is 100%.

Group of orthologs #782. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 D.mojavensis:230

A8J8U1              	100.00%		B4KYX3              	100.00%
Bootstrap support for A8J8U1 as seed ortholog is 100%.
Bootstrap support for B4KYX3 as seed ortholog is 100%.

Group of orthologs #783. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 D.mojavensis:229

A8HSS0              	100.00%		B4K7V1              	100.00%
Bootstrap support for A8HSS0 as seed ortholog is 100%.
Bootstrap support for B4K7V1 as seed ortholog is 100%.

Group of orthologs #784. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 D.mojavensis:229

A8HVL0              	100.00%		B4KH04              	100.00%
Bootstrap support for A8HVL0 as seed ortholog is 100%.
Bootstrap support for B4KH04 as seed ortholog is 100%.

Group of orthologs #785. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:229

A8HVP2              	100.00%		B4KS29              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 100%.
Bootstrap support for B4KS29 as seed ortholog is 100%.

Group of orthologs #786. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 D.mojavensis:41

A8J7M2              	100.00%		B4K7N1              	100.00%
Bootstrap support for A8J7M2 as seed ortholog is 100%.
Bootstrap support for B4K7N1 as seed ortholog is 93%.

Group of orthologs #787. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:229

A8ICC8              	100.00%		B4KQ66              	100.00%
Bootstrap support for A8ICC8 as seed ortholog is 100%.
Bootstrap support for B4KQ66 as seed ortholog is 100%.

Group of orthologs #788. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:73

A8IF80              	100.00%		B4KAZ1              	100.00%
                    	       		B4KDY1              	57.43%
Bootstrap support for A8IF80 as seed ortholog is 100%.
Bootstrap support for B4KAZ1 as seed ortholog is 99%.

Group of orthologs #789. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:70

A8J6A0              	100.00%		B4KK08              	100.00%
Bootstrap support for A8J6A0 as seed ortholog is 100%.
Bootstrap support for B4KK08 as seed ortholog is 99%.

Group of orthologs #790. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:123

A8JGJ2              	100.00%		B4KKS2              	100.00%
                    	       		B4KKS1              	32.56%
                    	       		B4KKQ8              	29.94%
                    	       		B4KKS0              	16.72%
                    	       		B4KKR3              	15.70%
                    	       		B4KKR0              	15.41%
                    	       		B4KA89              	15.41%
                    	       		B4KKP8              	13.95%
                    	       		B4KKR4              	13.81%
                    	       		B4KP16              	12.21%
                    	       		B4KKR5              	11.34%
Bootstrap support for A8JGJ2 as seed ortholog is 99%.
Bootstrap support for B4KKS2 as seed ortholog is 99%.

Group of orthologs #791. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 D.mojavensis:227

A8J073              	100.00%		B4KNB1              	100.00%
Bootstrap support for A8J073 as seed ortholog is 100%.
Bootstrap support for B4KNB1 as seed ortholog is 100%.

Group of orthologs #792. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:39

A8I4Q7              	100.00%		B4L950              	100.00%
Bootstrap support for A8I4Q7 as seed ortholog is 97%.
Bootstrap support for B4L950 as seed ortholog is 95%.

Group of orthologs #793. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 D.mojavensis:227

A8IR74              	100.00%		B4L663              	100.00%
Bootstrap support for A8IR74 as seed ortholog is 100%.
Bootstrap support for B4L663 as seed ortholog is 100%.

Group of orthologs #794. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 D.mojavensis:226

A8J2F9              	100.00%		B4KHM1              	100.00%
Bootstrap support for A8J2F9 as seed ortholog is 100%.
Bootstrap support for B4KHM1 as seed ortholog is 100%.

Group of orthologs #795. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 D.mojavensis:226

A8JDZ8              	100.00%		B4KKX1              	100.00%
Bootstrap support for A8JDZ8 as seed ortholog is 100%.
Bootstrap support for B4KKX1 as seed ortholog is 100%.

Group of orthologs #796. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 D.mojavensis:108

A8IYG7              	100.00%		B4L7V8              	100.00%
Bootstrap support for A8IYG7 as seed ortholog is 100%.
Bootstrap support for B4L7V8 as seed ortholog is 100%.

Group of orthologs #797. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:138

A8HQU6              	100.00%		B4KB46              	100.00%
Bootstrap support for A8HQU6 as seed ortholog is 99%.
Bootstrap support for B4KB46 as seed ortholog is 99%.

Group of orthologs #798. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 D.mojavensis:139

A8IKV5              	100.00%		B4K4J3              	100.00%
Bootstrap support for A8IKV5 as seed ortholog is 56%.
Alternative seed ortholog is A8HRQ4 (11 bits away from this cluster)
Bootstrap support for B4K4J3 as seed ortholog is 99%.

Group of orthologs #799. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 D.mojavensis:225

A8IIM0              	100.00%		B4KH87              	100.00%
Bootstrap support for A8IIM0 as seed ortholog is 100%.
Bootstrap support for B4KH87 as seed ortholog is 100%.

Group of orthologs #800. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 D.mojavensis:225

A8I5H6              	100.00%		B4L6H3              	100.00%
Bootstrap support for A8I5H6 as seed ortholog is 99%.
Bootstrap support for B4L6H3 as seed ortholog is 100%.

Group of orthologs #801. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 D.mojavensis:225

A8J9W0              	100.00%		B4KSL0              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 100%.
Bootstrap support for B4KSL0 as seed ortholog is 100%.

Group of orthologs #802. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 D.mojavensis:224

A8HQE3              	100.00%		B4KNM8              	100.00%
Bootstrap support for A8HQE3 as seed ortholog is 100%.
Bootstrap support for B4KNM8 as seed ortholog is 100%.

Group of orthologs #803. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 D.mojavensis:47

A8I2Z6              	100.00%		B4KT40              	100.00%
Bootstrap support for A8I2Z6 as seed ortholog is 100%.
Bootstrap support for B4KT40 as seed ortholog is 96%.

Group of orthologs #804. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 D.mojavensis:142

A8IWA3              	100.00%		B4L332              	100.00%
Bootstrap support for A8IWA3 as seed ortholog is 100%.
Bootstrap support for B4L332 as seed ortholog is 99%.

Group of orthologs #805. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:67

A8JFY4              	100.00%		B4K8T8              	100.00%
Bootstrap support for A8JFY4 as seed ortholog is 97%.
Bootstrap support for B4K8T8 as seed ortholog is 99%.

Group of orthologs #806. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:223

A8JEL2              	100.00%		B4KFM5              	100.00%
Bootstrap support for A8JEL2 as seed ortholog is 99%.
Bootstrap support for B4KFM5 as seed ortholog is 100%.

Group of orthologs #807. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:96

A8INA8              	100.00%		B4K9B8              	100.00%
Bootstrap support for A8INA8 as seed ortholog is 100%.
Bootstrap support for B4K9B8 as seed ortholog is 99%.

Group of orthologs #808. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 D.mojavensis:222

A8IJQ1              	100.00%		B4L310              	100.00%
Bootstrap support for A8IJQ1 as seed ortholog is 100%.
Bootstrap support for B4L310 as seed ortholog is 100%.

Group of orthologs #809. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:95

A8HNQ6              	100.00%		B4KBR1              	100.00%
Bootstrap support for A8HNQ6 as seed ortholog is 99%.
Bootstrap support for B4KBR1 as seed ortholog is 94%.

Group of orthologs #810. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 D.mojavensis:112

A8J1Q1              	100.00%		B4KNU4              	100.00%
                    	       		B4L1X6              	72.00%
Bootstrap support for A8J1Q1 as seed ortholog is 100%.
Bootstrap support for B4KNU4 as seed ortholog is 99%.

Group of orthologs #811. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 D.mojavensis:220

A8IGY1              	100.00%		B4KD51              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for B4KD51 as seed ortholog is 100%.

Group of orthologs #812. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 D.mojavensis:220

A8J644              	100.00%		B4KDK4              	100.00%
Bootstrap support for A8J644 as seed ortholog is 100%.
Bootstrap support for B4KDK4 as seed ortholog is 100%.

Group of orthologs #813. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 D.mojavensis:220

A8JH67              	100.00%		B4KEW0              	100.00%
Bootstrap support for A8JH67 as seed ortholog is 100%.
Bootstrap support for B4KEW0 as seed ortholog is 100%.

Group of orthologs #814. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 D.mojavensis:219

A8JF63              	100.00%		B4KFI6              	100.00%
Bootstrap support for A8JF63 as seed ortholog is 100%.
Bootstrap support for B4KFI6 as seed ortholog is 100%.

Group of orthologs #815. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 D.mojavensis:218

A8ISQ2              	100.00%		B4KI01              	100.00%
Bootstrap support for A8ISQ2 as seed ortholog is 100%.
Bootstrap support for B4KI01 as seed ortholog is 100%.

Group of orthologs #816. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 D.mojavensis:218

A8IHL3              	100.00%		B4KZY6              	100.00%
Bootstrap support for A8IHL3 as seed ortholog is 100%.
Bootstrap support for B4KZY6 as seed ortholog is 100%.

Group of orthologs #817. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 D.mojavensis:218

A8JAN2              	100.00%		B4L179              	100.00%
Bootstrap support for A8JAN2 as seed ortholog is 100%.
Bootstrap support for B4L179 as seed ortholog is 100%.

Group of orthologs #818. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 D.mojavensis:217

A8IP37              	100.00%		B4KD47              	100.00%
                    	       		B4L5Z6              	12.84%
Bootstrap support for A8IP37 as seed ortholog is 100%.
Bootstrap support for B4KD47 as seed ortholog is 100%.

Group of orthologs #819. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 D.mojavensis:217

A8I5B9              	100.00%		B4K6E2              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for B4K6E2 as seed ortholog is 100%.

Group of orthologs #820. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 D.mojavensis:217

A8J3C7              	100.00%		B4K5K5              	100.00%
Bootstrap support for A8J3C7 as seed ortholog is 100%.
Bootstrap support for B4K5K5 as seed ortholog is 100%.

Group of orthologs #821. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 D.mojavensis:217

A8IN82              	100.00%		B4KTP8              	100.00%
Bootstrap support for A8IN82 as seed ortholog is 100%.
Bootstrap support for B4KTP8 as seed ortholog is 100%.

Group of orthologs #822. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 D.mojavensis:217

A8I980              	100.00%		B4KZZ5              	100.00%
Bootstrap support for A8I980 as seed ortholog is 100%.
Bootstrap support for B4KZZ5 as seed ortholog is 100%.

Group of orthologs #823. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:134

A8J6H8              	100.00%		B4KQ42              	100.00%
Bootstrap support for A8J6H8 as seed ortholog is 99%.
Bootstrap support for B4KQ42 as seed ortholog is 99%.

Group of orthologs #824. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:216

A8ISA9              	100.00%		B4K570              	100.00%
A8IEE5              	52.33%		
A8J434              	42.37%		
Bootstrap support for A8ISA9 as seed ortholog is 89%.
Bootstrap support for B4K570 as seed ortholog is 100%.

Group of orthologs #825. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 D.mojavensis:216

A8J0Z8              	100.00%		B4K998              	100.00%
Bootstrap support for A8J0Z8 as seed ortholog is 100%.
Bootstrap support for B4K998 as seed ortholog is 100%.

Group of orthologs #826. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 D.mojavensis:216

A8I4A8              	100.00%		B4KTD8              	100.00%
Bootstrap support for A8I4A8 as seed ortholog is 100%.
Bootstrap support for B4KTD8 as seed ortholog is 100%.

Group of orthologs #827. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:215

A8J493              	100.00%		B4KSI7              	100.00%
Bootstrap support for A8J493 as seed ortholog is 100%.
Bootstrap support for B4KSI7 as seed ortholog is 100%.

Group of orthologs #828. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:27

A8IB12              	100.00%		B4KE81              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 99%.
Bootstrap support for B4KE81 as seed ortholog is 84%.

Group of orthologs #829. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 D.mojavensis:73

A8I9H8              	100.00%		B4KUI3              	100.00%
Bootstrap support for A8I9H8 as seed ortholog is 70%.
Alternative seed ortholog is A8JGN8 (30 bits away from this cluster)
Bootstrap support for B4KUI3 as seed ortholog is 93%.

Group of orthologs #830. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:125

A8JBM6              	100.00%		B4K9R4              	100.00%
Bootstrap support for A8JBM6 as seed ortholog is 99%.
Bootstrap support for B4K9R4 as seed ortholog is 99%.

Group of orthologs #831. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 D.mojavensis:214

A8JGI9              	100.00%		B4K9T0              	100.00%
Bootstrap support for A8JGI9 as seed ortholog is 100%.
Bootstrap support for B4K9T0 as seed ortholog is 100%.

Group of orthologs #832. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 D.mojavensis:3

A8J9C1              	100.00%		B4KLW8              	100.00%
                    	       		B4K7V0              	5.58%
Bootstrap support for A8J9C1 as seed ortholog is 66%.
Alternative seed ortholog is A8JBN8 (23 bits away from this cluster)
Bootstrap support for B4KLW8 as seed ortholog is 53%.
Alternative seed ortholog is B4K7U9 (3 bits away from this cluster)

Group of orthologs #833. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:79

A8HX77              	100.00%		B4KBH9              	100.00%
Bootstrap support for A8HX77 as seed ortholog is 99%.
Bootstrap support for B4KBH9 as seed ortholog is 99%.

Group of orthologs #834. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 D.mojavensis:213

A8HSU7              	100.00%		B4KQI0              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for B4KQI0 as seed ortholog is 100%.

Group of orthologs #835. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 D.mojavensis:213

A8HZX4              	100.00%		B4L5Y9              	100.00%
Bootstrap support for A8HZX4 as seed ortholog is 100%.
Bootstrap support for B4L5Y9 as seed ortholog is 100%.

Group of orthologs #836. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 D.mojavensis:146

A8J8G5              	100.00%		B4KJU3              	100.00%
Bootstrap support for A8J8G5 as seed ortholog is 100%.
Bootstrap support for B4KJU3 as seed ortholog is 99%.

Group of orthologs #837. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:213

A8J5Y5              	100.00%		B4KNA9              	100.00%
Bootstrap support for A8J5Y5 as seed ortholog is 99%.
Bootstrap support for B4KNA9 as seed ortholog is 100%.

Group of orthologs #838. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 D.mojavensis:212

A8IB34              	100.00%		B4K6A4              	100.00%
Bootstrap support for A8IB34 as seed ortholog is 100%.
Bootstrap support for B4K6A4 as seed ortholog is 100%.

Group of orthologs #839. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:212

A8HYT0              	100.00%		B4KJ08              	100.00%
Bootstrap support for A8HYT0 as seed ortholog is 97%.
Bootstrap support for B4KJ08 as seed ortholog is 100%.

Group of orthologs #840. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:99

A8I427              	100.00%		B4KN39              	100.00%
Bootstrap support for A8I427 as seed ortholog is 99%.
Bootstrap support for B4KN39 as seed ortholog is 99%.

Group of orthologs #841. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:108

A8J0P9              	100.00%		B4KFH6              	100.00%
Bootstrap support for A8J0P9 as seed ortholog is 97%.
Bootstrap support for B4KFH6 as seed ortholog is 99%.

Group of orthologs #842. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 D.mojavensis:151

A8J9H8              	100.00%		B4KCG6              	100.00%
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for B4KCG6 as seed ortholog is 100%.

Group of orthologs #843. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 D.mojavensis:212

A8IZH0              	100.00%		B4KXV0              	100.00%
Bootstrap support for A8IZH0 as seed ortholog is 100%.
Bootstrap support for B4KXV0 as seed ortholog is 100%.

Group of orthologs #844. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:139

A8JEQ2              	100.00%		B4L416              	100.00%
Bootstrap support for A8JEQ2 as seed ortholog is 99%.
Bootstrap support for B4L416 as seed ortholog is 99%.

Group of orthologs #845. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:211

A8I2N1              	100.00%		B4KPQ0              	100.00%
Bootstrap support for A8I2N1 as seed ortholog is 98%.
Bootstrap support for B4KPQ0 as seed ortholog is 100%.

Group of orthologs #846. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 D.mojavensis:211

Q944M9              	100.00%		B4K9D6              	100.00%
Bootstrap support for Q944M9 as seed ortholog is 100%.
Bootstrap support for B4K9D6 as seed ortholog is 100%.

Group of orthologs #847. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 D.mojavensis:211

A8JJA7              	100.00%		B4KBH4              	100.00%
Bootstrap support for A8JJA7 as seed ortholog is 100%.
Bootstrap support for B4KBH4 as seed ortholog is 100%.

Group of orthologs #848. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:210

A8ITN3              	100.00%		B4KIV6              	100.00%
A8IKH9              	21.62%		
A8HNW2              	17.90%		
A8HNV8              	17.47%		
A8HNV6              	17.25%		
A8J2G0              	13.97%		
A8HPI9              	13.97%		
A8I3L6              	13.54%		
A8HRY6              	12.45%		
A8JDI4              	11.79%		
A8J0R9              	11.57%		
A8JGI3              	11.57%		
A8JGQ5              	10.26%		
A8JGV2              	10.26%		
A8J9Z4              	9.83%		
A8I2W8              	9.83%		
A8JBS1              	5.02%		
Bootstrap support for A8ITN3 as seed ortholog is 100%.
Bootstrap support for B4KIV6 as seed ortholog is 100%.

Group of orthologs #849. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:210

A8I0A0              	100.00%		B4KAU5              	100.00%
Bootstrap support for A8I0A0 as seed ortholog is 100%.
Bootstrap support for B4KAU5 as seed ortholog is 100%.

Group of orthologs #850. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:137

A8I1B6              	100.00%		B4KHR8              	100.00%
Bootstrap support for A8I1B6 as seed ortholog is 100%.
Bootstrap support for B4KHR8 as seed ortholog is 99%.

Group of orthologs #851. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:114

A8JA68              	100.00%		B4KC31              	100.00%
Bootstrap support for A8JA68 as seed ortholog is 100%.
Bootstrap support for B4KC31 as seed ortholog is 99%.

Group of orthologs #852. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:210

A8IE97              	100.00%		B4KX17              	100.00%
Bootstrap support for A8IE97 as seed ortholog is 100%.
Bootstrap support for B4KX17 as seed ortholog is 100%.

Group of orthologs #853. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:210

A8IV15              	100.00%		B4L3S8              	100.00%
Bootstrap support for A8IV15 as seed ortholog is 100%.
Bootstrap support for B4L3S8 as seed ortholog is 100%.

Group of orthologs #854. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 D.mojavensis:210

A8JHY2              	100.00%		B4KJK0              	100.00%
Bootstrap support for A8JHY2 as seed ortholog is 100%.
Bootstrap support for B4KJK0 as seed ortholog is 100%.

Group of orthologs #855. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 D.mojavensis:1

A8J6J0              	100.00%		B4KC44              	100.00%
                    	       		B4KQW1              	43.29%
                    	       		B4K4I3              	17.66%
                    	       		B4KG50              	15.84%
                    	       		B4K8S9              	15.04%
                    	       		B4K9I4              	12.92%
                    	       		B4L163              	12.51%
                    	       		B4KAD8              	11.30%
                    	       		B4KB78              	7.16%
Bootstrap support for A8J6J0 as seed ortholog is 100%.
Bootstrap support for B4KC44 as seed ortholog is 48%.
Alternative seed ortholog is B4KY85 (1 bits away from this cluster)

Group of orthologs #856. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 D.mojavensis:80

A8J7V0              	100.00%		B4KSZ9              	100.00%
                    	       		B4KQN2              	35.10%
Bootstrap support for A8J7V0 as seed ortholog is 100%.
Bootstrap support for B4KSZ9 as seed ortholog is 98%.

Group of orthologs #857. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 D.mojavensis:209

A8IEP3              	100.00%		B4KQX6              	100.00%
Bootstrap support for A8IEP3 as seed ortholog is 100%.
Bootstrap support for B4KQX6 as seed ortholog is 100%.

Group of orthologs #858. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 D.mojavensis:88

A8JC40              	100.00%		B4KFV2              	100.00%
Bootstrap support for A8JC40 as seed ortholog is 99%.
Bootstrap support for B4KFV2 as seed ortholog is 99%.

Group of orthologs #859. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:77

A8J274              	100.00%		B4KYH7              	100.00%
Bootstrap support for A8J274 as seed ortholog is 96%.
Bootstrap support for B4KYH7 as seed ortholog is 99%.

Group of orthologs #860. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 D.mojavensis:81

A8J7C9              	100.00%		B4L7P7              	100.00%
Bootstrap support for A8J7C9 as seed ortholog is 100%.
Bootstrap support for B4L7P7 as seed ortholog is 99%.

Group of orthologs #861. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 D.mojavensis:209

A8JE07              	100.00%		B4L6U3              	100.00%
Bootstrap support for A8JE07 as seed ortholog is 100%.
Bootstrap support for B4L6U3 as seed ortholog is 100%.

Group of orthologs #862. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 D.mojavensis:17

A8HQ72              	100.00%		B4KA55              	100.00%
Bootstrap support for A8HQ72 as seed ortholog is 86%.
Bootstrap support for B4KA55 as seed ortholog is 91%.

Group of orthologs #863. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 D.mojavensis:208

A8IJ00              	100.00%		B4KEU7              	100.00%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for B4KEU7 as seed ortholog is 100%.

Group of orthologs #864. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 D.mojavensis:208

A8J593              	100.00%		B4K4I4              	100.00%
Bootstrap support for A8J593 as seed ortholog is 100%.
Bootstrap support for B4K4I4 as seed ortholog is 100%.

Group of orthologs #865. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 D.mojavensis:208

A8JH66              	100.00%		B4K8F3              	100.00%
Bootstrap support for A8JH66 as seed ortholog is 100%.
Bootstrap support for B4K8F3 as seed ortholog is 100%.

Group of orthologs #866. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:52

A8J3F7              	100.00%		B4KXA8              	100.00%
                    	       		B4KCI3              	43.90%
Bootstrap support for A8J3F7 as seed ortholog is 95%.
Bootstrap support for B4KXA8 as seed ortholog is 92%.

Group of orthologs #867. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:207

A8HWB9              	100.00%		B4K4F9              	100.00%
Bootstrap support for A8HWB9 as seed ortholog is 100%.
Bootstrap support for B4K4F9 as seed ortholog is 100%.

Group of orthologs #868. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:207

A8HS59              	100.00%		B4L275              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for B4L275 as seed ortholog is 100%.

Group of orthologs #869. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:207

A8J275              	100.00%		B4KHM2              	100.00%
Bootstrap support for A8J275 as seed ortholog is 100%.
Bootstrap support for B4KHM2 as seed ortholog is 100%.

Group of orthologs #870. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:125

A8J0I6              	100.00%		B4KJD5              	100.00%
Bootstrap support for A8J0I6 as seed ortholog is 100%.
Bootstrap support for B4KJD5 as seed ortholog is 99%.

Group of orthologs #871. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:207

Q9ATG8              	100.00%		B4K856              	100.00%
Bootstrap support for Q9ATG8 as seed ortholog is 100%.
Bootstrap support for B4K856 as seed ortholog is 100%.

Group of orthologs #872. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:207

A8IRJ6              	100.00%		B4L6D7              	100.00%
Bootstrap support for A8IRJ6 as seed ortholog is 100%.
Bootstrap support for B4L6D7 as seed ortholog is 100%.

Group of orthologs #873. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 D.mojavensis:207

A8JBY6              	100.00%		B4L8M0              	100.00%
Bootstrap support for A8JBY6 as seed ortholog is 100%.
Bootstrap support for B4L8M0 as seed ortholog is 100%.

Group of orthologs #874. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 D.mojavensis:206

A8IUV7              	100.00%		B4KH38              	100.00%
Bootstrap support for A8IUV7 as seed ortholog is 100%.
Bootstrap support for B4KH38 as seed ortholog is 100%.

Group of orthologs #875. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:79

Q66YD3              	100.00%		B4KQ15              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 99%.
Bootstrap support for B4KQ15 as seed ortholog is 94%.

Group of orthologs #876. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:119

A8JES7              	100.00%		B4L932              	100.00%
Bootstrap support for A8JES7 as seed ortholog is 100%.
Bootstrap support for B4L932 as seed ortholog is 99%.

Group of orthologs #877. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 D.mojavensis:205

A8I4H4              	100.00%		B4KD71              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for B4KD71 as seed ortholog is 100%.

Group of orthologs #878. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 D.mojavensis:91

A8HP17              	100.00%		B4KMG6              	100.00%
Bootstrap support for A8HP17 as seed ortholog is 100%.
Bootstrap support for B4KMG6 as seed ortholog is 99%.

Group of orthologs #879. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 D.mojavensis:205

A8IVU0              	100.00%		B4KCR2              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for B4KCR2 as seed ortholog is 100%.

Group of orthologs #880. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 D.mojavensis:205

A8JAA8              	100.00%		B4K9W3              	100.00%
Bootstrap support for A8JAA8 as seed ortholog is 100%.
Bootstrap support for B4K9W3 as seed ortholog is 100%.

Group of orthologs #881. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 D.mojavensis:205

A8JEY5              	100.00%		B4KWR0              	100.00%
Bootstrap support for A8JEY5 as seed ortholog is 99%.
Bootstrap support for B4KWR0 as seed ortholog is 100%.

Group of orthologs #882. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 D.mojavensis:47

Q6UPR4              	100.00%		B4L7Q8              	100.00%
Bootstrap support for Q6UPR4 as seed ortholog is 99%.
Bootstrap support for B4L7Q8 as seed ortholog is 93%.

Group of orthologs #883. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:40

A8HXZ5              	100.00%		B4KUH4              	100.00%
                    	       		B4L198              	43.56%
                    	       		B4KLB1              	25.74%
Bootstrap support for A8HXZ5 as seed ortholog is 100%.
Bootstrap support for B4KUH4 as seed ortholog is 98%.

Group of orthologs #884. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:204

A8HW46              	100.00%		B4L8R0              	100.00%
                    	       		B4L6Q9              	5.63%
Bootstrap support for A8HW46 as seed ortholog is 100%.
Bootstrap support for B4L8R0 as seed ortholog is 100%.

Group of orthologs #885. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:204

A8IZE1              	100.00%		B4KZS5              	100.00%
Bootstrap support for A8IZE1 as seed ortholog is 100%.
Bootstrap support for B4KZS5 as seed ortholog is 100%.

Group of orthologs #886. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:21

A8J901              	100.00%		B4KUM1              	100.00%
Bootstrap support for A8J901 as seed ortholog is 98%.
Bootstrap support for B4KUM1 as seed ortholog is 76%.

Group of orthologs #887. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:56

A8JER8              	100.00%		B4KPB9              	100.00%
Bootstrap support for A8JER8 as seed ortholog is 100%.
Bootstrap support for B4KPB9 as seed ortholog is 86%.

Group of orthologs #888. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 D.mojavensis:204

A8JCZ5              	100.00%		B4L2H4              	100.00%
Bootstrap support for A8JCZ5 as seed ortholog is 100%.
Bootstrap support for B4L2H4 as seed ortholog is 100%.

Group of orthologs #889. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 D.mojavensis:203

A8JFZ2              	100.00%		B4KY35              	100.00%
A8IJK9              	28.30%		
A8HQN2              	6.15%		
Bootstrap support for A8JFZ2 as seed ortholog is 100%.
Bootstrap support for B4KY35 as seed ortholog is 100%.

Group of orthologs #890. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 D.mojavensis:203

A8JGN6              	100.00%		B4KRZ0              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for B4KRZ0 as seed ortholog is 100%.

Group of orthologs #891. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 D.mojavensis:202

A8JDP4              	100.00%		B4KHQ2              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for B4KHQ2 as seed ortholog is 100%.

Group of orthologs #892. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 D.mojavensis:202

A8JAS9              	100.00%		B4KML5              	100.00%
Bootstrap support for A8JAS9 as seed ortholog is 100%.
Bootstrap support for B4KML5 as seed ortholog is 100%.

Group of orthologs #893. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 D.mojavensis:151

A8JFK7              	100.00%		B4L7H5              	100.00%
A8ISJ6              	100.00%		B4K5S3              	100.00%
Q9ATG5              	100.00%		
A8IT92              	27.69%		
A8I963              	25.80%		
A8HPB7              	18.10%		
A8HPB6              	17.03%		
A8IB37              	15.59%		
A8IB85              	13.89%		
A8IBH3              	13.75%		
A8IHH1              	11.65%		
A8J863              	8.42%		
A8IT77              	7.89%		
A8I8K6              	6.56%		
Bootstrap support for A8JFK7 as seed ortholog is 100%.
Bootstrap support for A8ISJ6 as seed ortholog is 100%.
Bootstrap support for Q9ATG5 as seed ortholog is 100%.
Bootstrap support for B4L7H5 as seed ortholog is 99%.
Bootstrap support for B4K5S3 as seed ortholog is 98%.

Group of orthologs #894. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 D.mojavensis:201

A8HM37              	100.00%		B4KRH2              	100.00%
                    	       		B4KDW2              	30.66%
                    	       		B4KRH3              	28.75%
Bootstrap support for A8HM37 as seed ortholog is 85%.
Bootstrap support for B4KRH2 as seed ortholog is 100%.

Group of orthologs #895. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 D.mojavensis:201

A8HY98              	100.00%		B4K9D2              	100.00%
Bootstrap support for A8HY98 as seed ortholog is 100%.
Bootstrap support for B4K9D2 as seed ortholog is 100%.

Group of orthologs #896. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 D.mojavensis:201

A8ITD7              	100.00%		B4K4N2              	100.00%
Bootstrap support for A8ITD7 as seed ortholog is 100%.
Bootstrap support for B4K4N2 as seed ortholog is 100%.

Group of orthologs #897. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 D.mojavensis:103

A8IU79              	100.00%		B4KIL5              	100.00%
Bootstrap support for A8IU79 as seed ortholog is 100%.
Bootstrap support for B4KIL5 as seed ortholog is 93%.

Group of orthologs #898. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 D.mojavensis:201

A8J131              	100.00%		B4KN46              	100.00%
Bootstrap support for A8J131 as seed ortholog is 100%.
Bootstrap support for B4KN46 as seed ortholog is 100%.

Group of orthologs #899. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 D.mojavensis:201

A8J1P1              	100.00%		B4KPL2              	100.00%
Bootstrap support for A8J1P1 as seed ortholog is 100%.
Bootstrap support for B4KPL2 as seed ortholog is 100%.

Group of orthologs #900. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 D.mojavensis:200

A8IQQ5              	100.00%		B4K5U9              	100.00%
Bootstrap support for A8IQQ5 as seed ortholog is 100%.
Bootstrap support for B4K5U9 as seed ortholog is 100%.

Group of orthologs #901. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 D.mojavensis:61

A8IC07              	100.00%		B4KFT6              	100.00%
Bootstrap support for A8IC07 as seed ortholog is 100%.
Bootstrap support for B4KFT6 as seed ortholog is 97%.

Group of orthologs #902. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:111

A8JC37              	100.00%		B4KCG5              	100.00%
Bootstrap support for A8JC37 as seed ortholog is 99%.
Bootstrap support for B4KCG5 as seed ortholog is 99%.

Group of orthologs #903. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 D.mojavensis:200

A8IZA4              	100.00%		B4L8C7              	100.00%
Bootstrap support for A8IZA4 as seed ortholog is 100%.
Bootstrap support for B4L8C7 as seed ortholog is 100%.

Group of orthologs #904. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 D.mojavensis:199

A8HPN6              	100.00%		B4KZS8              	100.00%
Bootstrap support for A8HPN6 as seed ortholog is 100%.
Bootstrap support for B4KZS8 as seed ortholog is 100%.

Group of orthologs #905. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 D.mojavensis:199

A8IWQ4              	100.00%		B4KY19              	100.00%
Bootstrap support for A8IWQ4 as seed ortholog is 100%.
Bootstrap support for B4KY19 as seed ortholog is 100%.

Group of orthologs #906. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 D.mojavensis:199

A8J804              	100.00%		B4L5F2              	100.00%
Bootstrap support for A8J804 as seed ortholog is 100%.
Bootstrap support for B4L5F2 as seed ortholog is 100%.

Group of orthologs #907. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:82

A8JBR9              	100.00%		B4L3E9              	100.00%
Bootstrap support for A8JBR9 as seed ortholog is 99%.
Bootstrap support for B4L3E9 as seed ortholog is 99%.

Group of orthologs #908. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 D.mojavensis:198

A8HVA3              	100.00%		B4K7B1              	100.00%
A8HSB0              	87.50%		
Bootstrap support for A8HVA3 as seed ortholog is 90%.
Bootstrap support for B4K7B1 as seed ortholog is 100%.

Group of orthologs #909. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 D.mojavensis:198

A8JGE8              	100.00%		B4KA45              	100.00%
Bootstrap support for A8JGE8 as seed ortholog is 100%.
Bootstrap support for B4KA45 as seed ortholog is 100%.

Group of orthologs #910. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 D.mojavensis:109

A8J5F4              	100.00%		B4KNA2              	100.00%
Bootstrap support for A8J5F4 as seed ortholog is 100%.
Bootstrap support for B4KNA2 as seed ortholog is 97%.

Group of orthologs #911. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 D.mojavensis:198

A8I2G3              	100.00%		B4L9A6              	100.00%
Bootstrap support for A8I2G3 as seed ortholog is 100%.
Bootstrap support for B4L9A6 as seed ortholog is 100%.

Group of orthologs #912. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 D.mojavensis:198

A8J5W6              	100.00%		B4KVW2              	100.00%
Bootstrap support for A8J5W6 as seed ortholog is 100%.
Bootstrap support for B4KVW2 as seed ortholog is 100%.

Group of orthologs #913. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 D.mojavensis:198

A8J1B8              	100.00%		B4L073              	100.00%
Bootstrap support for A8J1B8 as seed ortholog is 100%.
Bootstrap support for B4L073 as seed ortholog is 100%.

Group of orthologs #914. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:84

A8JGY3              	100.00%		B4KLY1              	100.00%
Bootstrap support for A8JGY3 as seed ortholog is 99%.
Bootstrap support for B4KLY1 as seed ortholog is 99%.

Group of orthologs #915. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 D.mojavensis:79

Q948T5              	100.00%		B4L0F6              	100.00%
A8IG47              	21.18%		B4KWL6              	14.03%
A8HVX7              	6.33%		B4KWL7              	5.57%
Bootstrap support for Q948T5 as seed ortholog is 100%.
Bootstrap support for B4L0F6 as seed ortholog is 98%.

Group of orthologs #916. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:56

A8IRP0              	100.00%		B4KFM3              	100.00%
A8J006              	10.67%		
A8J3L0              	8.33%		
Bootstrap support for A8IRP0 as seed ortholog is 93%.
Bootstrap support for B4KFM3 as seed ortholog is 92%.

Group of orthologs #917. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 D.mojavensis:197

Q6V9B3              	100.00%		B4L4B4              	100.00%
                    	       		B4KZ34              	9.03%
Bootstrap support for Q6V9B3 as seed ortholog is 100%.
Bootstrap support for B4L4B4 as seed ortholog is 100%.

Group of orthologs #918. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 D.mojavensis:58

A8HST2              	100.00%		B4L3P7              	100.00%
Bootstrap support for A8HST2 as seed ortholog is 100%.
Bootstrap support for B4L3P7 as seed ortholog is 87%.

Group of orthologs #919. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

A8IIJ6              	100.00%		B4KXP5              	100.00%
A8IIJ1              	6.12%		
Bootstrap support for A8IIJ6 as seed ortholog is 100%.
Bootstrap support for B4KXP5 as seed ortholog is 100%.

Group of orthologs #920. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

Q5XPS1              	100.00%		B4L903              	100.00%
                    	       		B4L966              	19.80%
Bootstrap support for Q5XPS1 as seed ortholog is 100%.
Bootstrap support for B4L903 as seed ortholog is 100%.

Group of orthologs #921. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

A8JBA4              	100.00%		B4KBY4              	100.00%
Bootstrap support for A8JBA4 as seed ortholog is 100%.
Bootstrap support for B4KBY4 as seed ortholog is 100%.

Group of orthologs #922. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

A8JGW5              	100.00%		B4KB43              	100.00%
Bootstrap support for A8JGW5 as seed ortholog is 100%.
Bootstrap support for B4KB43 as seed ortholog is 100%.

Group of orthologs #923. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:146

A8JBG7              	100.00%		B4KI21              	100.00%
Bootstrap support for A8JBG7 as seed ortholog is 100%.
Bootstrap support for B4KI21 as seed ortholog is 100%.

Group of orthologs #924. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

A8IY04              	100.00%		B4L9H0              	100.00%
Bootstrap support for A8IY04 as seed ortholog is 100%.
Bootstrap support for B4L9H0 as seed ortholog is 100%.

Group of orthologs #925. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

A8JHC3              	100.00%		B4KTL7              	100.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for B4KTL7 as seed ortholog is 100%.

Group of orthologs #926. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 D.mojavensis:196

A8JC02              	100.00%		B4L0C8              	100.00%
Bootstrap support for A8JC02 as seed ortholog is 100%.
Bootstrap support for B4L0C8 as seed ortholog is 100%.

Group of orthologs #927. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 D.mojavensis:195

A8HSR5              	100.00%		B4K9I3              	100.00%
Bootstrap support for A8HSR5 as seed ortholog is 100%.
Bootstrap support for B4K9I3 as seed ortholog is 100%.

Group of orthologs #928. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 D.mojavensis:195

A8I2T0              	100.00%		B4KEQ8              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for B4KEQ8 as seed ortholog is 100%.

Group of orthologs #929. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 D.mojavensis:195

A8HP11              	100.00%		B4KRY2              	100.00%
Bootstrap support for A8HP11 as seed ortholog is 100%.
Bootstrap support for B4KRY2 as seed ortholog is 100%.

Group of orthologs #930. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 D.mojavensis:195

A8IIC7              	100.00%		B4KZ49              	100.00%
Bootstrap support for A8IIC7 as seed ortholog is 100%.
Bootstrap support for B4KZ49 as seed ortholog is 100%.

Group of orthologs #931. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 D.mojavensis:195

A8J8U5              	100.00%		B4KJI6              	100.00%
Bootstrap support for A8J8U5 as seed ortholog is 100%.
Bootstrap support for B4KJI6 as seed ortholog is 100%.

Group of orthologs #932. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 D.mojavensis:128

A8J3U2              	100.00%		B4KPR6              	100.00%
Bootstrap support for A8J3U2 as seed ortholog is 100%.
Bootstrap support for B4KPR6 as seed ortholog is 99%.

Group of orthologs #933. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 D.mojavensis:194

A8J7S5              	100.00%		B4KBK0              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for B4KBK0 as seed ortholog is 100%.

Group of orthologs #934. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 D.mojavensis:118

A8JEV0              	100.00%		B4K7N0              	100.00%
Bootstrap support for A8JEV0 as seed ortholog is 100%.
Bootstrap support for B4K7N0 as seed ortholog is 100%.

Group of orthologs #935. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 D.mojavensis:194

A8JBV1              	100.00%		B4KFT8              	100.00%
Bootstrap support for A8JBV1 as seed ortholog is 100%.
Bootstrap support for B4KFT8 as seed ortholog is 100%.

Group of orthologs #936. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 D.mojavensis:131

A8HXL0              	100.00%		B4K4Q4              	100.00%
A8J3P3              	15.88%		
Bootstrap support for A8HXL0 as seed ortholog is 100%.
Bootstrap support for B4K4Q4 as seed ortholog is 99%.

Group of orthologs #937. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:53

A8HQ87              	100.00%		B4L825              	100.00%
Bootstrap support for A8HQ87 as seed ortholog is 99%.
Bootstrap support for B4L825 as seed ortholog is 98%.

Group of orthologs #938. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 D.mojavensis:119

A8IX31              	100.00%		B4KYV1              	100.00%
Bootstrap support for A8IX31 as seed ortholog is 100%.
Bootstrap support for B4KYV1 as seed ortholog is 99%.

Group of orthologs #939. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 D.mojavensis:193

A8JEA1              	100.00%		B4KWC0              	100.00%
Bootstrap support for A8JEA1 as seed ortholog is 100%.
Bootstrap support for B4KWC0 as seed ortholog is 100%.

Group of orthologs #940. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 D.mojavensis:4

A8IX73              	100.00%		B4KAB2              	100.00%
                    	       		B4L0T8              	20.22%
                    	       		B4KN79              	20.10%
                    	       		B4KR05              	15.41%
                    	       		B4KA40              	12.58%
                    	       		B4KT95              	11.84%
                    	       		B4KT96              	7.27%
Bootstrap support for A8IX73 as seed ortholog is 100%.
Bootstrap support for B4KAB2 as seed ortholog is 54%.
Alternative seed ortholog is B4KWH4 (4 bits away from this cluster)

Group of orthologs #941. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 D.mojavensis:192

A8J387              	100.00%		B4K7I6              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for B4K7I6 as seed ortholog is 100%.

Group of orthologs #942. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:119

A8JDZ2              	100.00%		B4K7L1              	100.00%
Bootstrap support for A8JDZ2 as seed ortholog is 99%.
Bootstrap support for B4K7L1 as seed ortholog is 99%.

Group of orthologs #943. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 D.mojavensis:192

A8HYM2              	100.00%		B4L5G0              	100.00%
Bootstrap support for A8HYM2 as seed ortholog is 100%.
Bootstrap support for B4L5G0 as seed ortholog is 100%.

Group of orthologs #944. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 D.mojavensis:113

A8J3X9              	100.00%		B4L088              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 100%.
Bootstrap support for B4L088 as seed ortholog is 100%.

Group of orthologs #945. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 D.mojavensis:52

A8IYM3              	100.00%		B4L255              	100.00%
A8IYN1              	25.08%		B4KNK1              	13.72%
Bootstrap support for A8IYM3 as seed ortholog is 81%.
Bootstrap support for B4L255 as seed ortholog is 61%.
Alternative seed ortholog is B4KP74 (52 bits away from this cluster)

Group of orthologs #946. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:51

A8HQK6              	100.00%		B4KIQ0              	100.00%
                    	       		B4KLT3              	9.70%
Bootstrap support for A8HQK6 as seed ortholog is 51%.
Alternative seed ortholog is A8I240 (3 bits away from this cluster)
Bootstrap support for B4KIQ0 as seed ortholog is 77%.

Group of orthologs #947. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 D.mojavensis:191

Q6V506              	100.00%		B4KY50              	100.00%
Bootstrap support for Q6V506 as seed ortholog is 99%.
Bootstrap support for B4KY50 as seed ortholog is 100%.

Group of orthologs #948. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 D.mojavensis:62

A8J0I9              	100.00%		B4KPR0              	100.00%
                    	       		B4L2H0              	20.06%
                    	       		B4K931              	8.93%
Bootstrap support for A8J0I9 as seed ortholog is 71%.
Alternative seed ortholog is A8IYT3 (23 bits away from this cluster)
Bootstrap support for B4KPR0 as seed ortholog is 96%.

Group of orthologs #949. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:103

A8J1X5              	100.00%		B4KQC2              	100.00%
A8IVY4              	11.34%		B4KN71              	8.75%
Bootstrap support for A8J1X5 as seed ortholog is 100%.
Bootstrap support for B4KQC2 as seed ortholog is 100%.

Group of orthologs #950. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:190

A8I1Q7              	100.00%		B4KA94              	100.00%
Bootstrap support for A8I1Q7 as seed ortholog is 100%.
Bootstrap support for B4KA94 as seed ortholog is 100%.

Group of orthologs #951. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 D.mojavensis:190

A8I320              	100.00%		B4KF33              	100.00%
Bootstrap support for A8I320 as seed ortholog is 99%.
Bootstrap support for B4KF33 as seed ortholog is 100%.

Group of orthologs #952. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:190

A8HMM6              	100.00%		B4KVB0              	100.00%
Bootstrap support for A8HMM6 as seed ortholog is 100%.
Bootstrap support for B4KVB0 as seed ortholog is 100%.

Group of orthologs #953. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:190

A8ISK5              	100.00%		B4KG64              	100.00%
Bootstrap support for A8ISK5 as seed ortholog is 100%.
Bootstrap support for B4KG64 as seed ortholog is 100%.

Group of orthologs #954. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:120

A8HQD2              	100.00%		B4L3B5              	100.00%
Bootstrap support for A8HQD2 as seed ortholog is 100%.
Bootstrap support for B4L3B5 as seed ortholog is 99%.

Group of orthologs #955. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:190

A8I728              	100.00%		B4L5Z8              	100.00%
Bootstrap support for A8I728 as seed ortholog is 100%.
Bootstrap support for B4L5Z8 as seed ortholog is 100%.

Group of orthologs #956. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:103

A8IBI1              	100.00%		B4L7V4              	100.00%
Bootstrap support for A8IBI1 as seed ortholog is 99%.
Bootstrap support for B4L7V4 as seed ortholog is 100%.

Group of orthologs #957. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 D.mojavensis:190

A8JEM3              	100.00%		B4KVV4              	100.00%
Bootstrap support for A8JEM3 as seed ortholog is 100%.
Bootstrap support for B4KVV4 as seed ortholog is 100%.

Group of orthologs #958. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:189

A8HRZ9              	100.00%		B4KDT0              	100.00%
Bootstrap support for A8HRZ9 as seed ortholog is 100%.
Bootstrap support for B4KDT0 as seed ortholog is 100%.

Group of orthologs #959. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 D.mojavensis:189

A8IYQ8              	100.00%		B4KDP5              	100.00%
Bootstrap support for A8IYQ8 as seed ortholog is 100%.
Bootstrap support for B4KDP5 as seed ortholog is 100%.

Group of orthologs #960. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:188

A8IR81              	100.00%		B4K7B2              	100.00%
A8HSB5              	98.44%		
Q42680              	92.19%		
A8HWF6              	87.50%		
A8HWM8              	84.38%		
A8JJE0              	70.31%		
Bootstrap support for A8IR81 as seed ortholog is 100%.
Bootstrap support for B4K7B2 as seed ortholog is 100%.

Group of orthologs #961. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:188

A8J0T9              	100.00%		B4KJV0              	100.00%
A8ISJ2              	24.72%		B4KFN5              	6.60%
Bootstrap support for A8J0T9 as seed ortholog is 100%.
Bootstrap support for B4KJV0 as seed ortholog is 100%.

Group of orthologs #962. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:188

A8I678              	100.00%		B4K734              	100.00%
Bootstrap support for A8I678 as seed ortholog is 100%.
Bootstrap support for B4K734 as seed ortholog is 100%.

Group of orthologs #963. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:62

A8HQN4              	100.00%		B4KKT1              	100.00%
Bootstrap support for A8HQN4 as seed ortholog is 100%.
Bootstrap support for B4KKT1 as seed ortholog is 94%.

Group of orthologs #964. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:188

A8IW48              	100.00%		B4K5A5              	100.00%
Bootstrap support for A8IW48 as seed ortholog is 100%.
Bootstrap support for B4K5A5 as seed ortholog is 100%.

Group of orthologs #965. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 D.mojavensis:188

A8ICL2              	100.00%		B4KG44              	100.00%
Bootstrap support for A8ICL2 as seed ortholog is 100%.
Bootstrap support for B4KG44 as seed ortholog is 100%.

Group of orthologs #966. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:54

A8J1Y2              	100.00%		B4KNT4              	100.00%
                    	       		B4KLQ9              	52.80%
Bootstrap support for A8J1Y2 as seed ortholog is 90%.
Bootstrap support for B4KNT4 as seed ortholog is 87%.

Group of orthologs #967. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 D.mojavensis:187

A8IC58              	100.00%		B4K5B4              	100.00%
Bootstrap support for A8IC58 as seed ortholog is 100%.
Bootstrap support for B4K5B4 as seed ortholog is 100%.

Group of orthologs #968. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 D.mojavensis:187

A8HMG4              	100.00%		B4KN58              	100.00%
Bootstrap support for A8HMG4 as seed ortholog is 82%.
Bootstrap support for B4KN58 as seed ortholog is 100%.

Group of orthologs #969. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:79

A8IZV8              	100.00%		B4K6U6              	100.00%
Bootstrap support for A8IZV8 as seed ortholog is 99%.
Bootstrap support for B4K6U6 as seed ortholog is 99%.

Group of orthologs #970. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 D.mojavensis:187

A8IAG6              	100.00%		B4KY37              	100.00%
Bootstrap support for A8IAG6 as seed ortholog is 100%.
Bootstrap support for B4KY37 as seed ortholog is 100%.

Group of orthologs #971. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 D.mojavensis:187

A8JG68              	100.00%		B4K7P6              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for B4K7P6 as seed ortholog is 100%.

Group of orthologs #972. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:16

A8J3X0              	100.00%		B4KT48              	100.00%
A8IL00              	9.98%		
A8J8C9              	7.73%		
A8IYL6              	7.73%		
Bootstrap support for A8J3X0 as seed ortholog is 95%.
Bootstrap support for B4KT48 as seed ortholog is 64%.
Alternative seed ortholog is B4KCI4 (16 bits away from this cluster)

Group of orthologs #973. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:74

A8I6J1              	100.00%		B4KBZ2              	100.00%
                    	       		B4L7Y4              	20.09%
Bootstrap support for A8I6J1 as seed ortholog is 93%.
Bootstrap support for B4KBZ2 as seed ortholog is 99%.

Group of orthologs #974. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 D.mojavensis:87

A8J588              	100.00%		B4K551              	100.00%
                    	       		B4K549              	38.94%
Bootstrap support for A8J588 as seed ortholog is 100%.
Bootstrap support for B4K551 as seed ortholog is 99%.

Group of orthologs #975. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 D.mojavensis:186

A8HPU0              	100.00%		B4K5A3              	100.00%
Bootstrap support for A8HPU0 as seed ortholog is 100%.
Bootstrap support for B4K5A3 as seed ortholog is 100%.

Group of orthologs #976. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 D.mojavensis:109

A8I7D3              	100.00%		B4K713              	100.00%
Bootstrap support for A8I7D3 as seed ortholog is 100%.
Bootstrap support for B4K713 as seed ortholog is 98%.

Group of orthologs #977. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 D.mojavensis:186

A8IG64              	100.00%		B4KCD5              	100.00%
Bootstrap support for A8IG64 as seed ortholog is 100%.
Bootstrap support for B4KCD5 as seed ortholog is 100%.

Group of orthologs #978. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 D.mojavensis:186

A8IXT4              	100.00%		B4KJ99              	100.00%
Bootstrap support for A8IXT4 as seed ortholog is 100%.
Bootstrap support for B4KJ99 as seed ortholog is 100%.

Group of orthologs #979. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 D.mojavensis:186

A8IVW9              	100.00%		B4L0Q7              	100.00%
Bootstrap support for A8IVW9 as seed ortholog is 100%.
Bootstrap support for B4L0Q7 as seed ortholog is 100%.

Group of orthologs #980. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:185

A8I9F6              	100.00%		B4KMG2              	100.00%
                    	       		B4KEA2              	25.79%
Bootstrap support for A8I9F6 as seed ortholog is 100%.
Bootstrap support for B4KMG2 as seed ortholog is 100%.

Group of orthologs #981. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 D.mojavensis:185

A8J9A9              	100.00%		B4KBI4              	100.00%
                    	       		B4KSC0              	11.35%
Bootstrap support for A8J9A9 as seed ortholog is 100%.
Bootstrap support for B4KBI4 as seed ortholog is 100%.

Group of orthologs #982. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:42

Q9LLJ1              	100.00%		B4L2K1              	100.00%
                    	       		B4K9U4              	5.80%
Bootstrap support for Q9LLJ1 as seed ortholog is 98%.
Bootstrap support for B4L2K1 as seed ortholog is 69%.
Alternative seed ortholog is B4KMF2 (42 bits away from this cluster)

Group of orthologs #983. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 D.mojavensis:185

A8IRC0              	100.00%		B4K8D3              	100.00%
Bootstrap support for A8IRC0 as seed ortholog is 100%.
Bootstrap support for B4K8D3 as seed ortholog is 100%.

Group of orthologs #984. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 D.mojavensis:185

A8IRS5              	100.00%		B4L591              	100.00%
Bootstrap support for A8IRS5 as seed ortholog is 100%.
Bootstrap support for B4L591 as seed ortholog is 100%.

Group of orthologs #985. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 D.mojavensis:184

A8IWU0              	100.00%		B4K7H1              	100.00%
Bootstrap support for A8IWU0 as seed ortholog is 100%.
Bootstrap support for B4K7H1 as seed ortholog is 100%.

Group of orthologs #986. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 D.mojavensis:184

A8I029              	100.00%		B4L3V8              	100.00%
Bootstrap support for A8I029 as seed ortholog is 100%.
Bootstrap support for B4L3V8 as seed ortholog is 100%.

Group of orthologs #987. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 D.mojavensis:14

A8IFL6              	100.00%		B4KYX7              	100.00%
Bootstrap support for A8IFL6 as seed ortholog is 100%.
Bootstrap support for B4KYX7 as seed ortholog is 81%.

Group of orthologs #988. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 D.mojavensis:183

A8IF69              	100.00%		B4KUF9              	100.00%
                    	       		B4KMB0              	24.86%
Bootstrap support for A8IF69 as seed ortholog is 95%.
Bootstrap support for B4KUF9 as seed ortholog is 100%.

Group of orthologs #989. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8IHT2              	100.00%		B4K663              	100.00%
Bootstrap support for A8IHT2 as seed ortholog is 100%.
Bootstrap support for B4K663 as seed ortholog is 100%.

Group of orthologs #990. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8IQD4              	100.00%		B4KFJ0              	100.00%
Bootstrap support for A8IQD4 as seed ortholog is 100%.
Bootstrap support for B4KFJ0 as seed ortholog is 100%.

Group of orthologs #991. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8HWK8              	100.00%		B4KVN8              	100.00%
Bootstrap support for A8HWK8 as seed ortholog is 100%.
Bootstrap support for B4KVN8 as seed ortholog is 100%.

Group of orthologs #992. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:183

A8JA29              	100.00%		B4K5J6              	100.00%
Bootstrap support for A8JA29 as seed ortholog is 94%.
Bootstrap support for B4K5J6 as seed ortholog is 100%.

Group of orthologs #993. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8ITE5              	100.00%		B4KKI0              	100.00%
Bootstrap support for A8ITE5 as seed ortholog is 100%.
Bootstrap support for B4KKI0 as seed ortholog is 100%.

Group of orthologs #994. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:18

A8HZ94              	100.00%		B4KYH8              	100.00%
Bootstrap support for A8HZ94 as seed ortholog is 100%.
Bootstrap support for B4KYH8 as seed ortholog is 66%.
Alternative seed ortholog is B4KI04 (18 bits away from this cluster)

Group of orthologs #995. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8J7C2              	100.00%		B4KBY3              	100.00%
Bootstrap support for A8J7C2 as seed ortholog is 100%.
Bootstrap support for B4KBY3 as seed ortholog is 100%.

Group of orthologs #996. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 D.mojavensis:183

A8HX47              	100.00%		B4L4Q2              	100.00%
Bootstrap support for A8HX47 as seed ortholog is 97%.
Bootstrap support for B4L4Q2 as seed ortholog is 100%.

Group of orthologs #997. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8IZD4              	100.00%		B4KZB4              	100.00%
Bootstrap support for A8IZD4 as seed ortholog is 100%.
Bootstrap support for B4KZB4 as seed ortholog is 100%.

Group of orthologs #998. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:183

A8J2L2              	100.00%		B4L340              	100.00%
Bootstrap support for A8J2L2 as seed ortholog is 100%.
Bootstrap support for B4L340 as seed ortholog is 100%.

Group of orthologs #999. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 D.mojavensis:124

A8JAD3              	100.00%		B4L3B0              	100.00%
Bootstrap support for A8JAD3 as seed ortholog is 100%.
Bootstrap support for B4L3B0 as seed ortholog is 99%.

Group of orthologs #1000. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 D.mojavensis:182

A8HP79              	100.00%		B4K822              	100.00%
Bootstrap support for A8HP79 as seed ortholog is 100%.
Bootstrap support for B4K822 as seed ortholog is 100%.

Group of orthologs #1001. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:70

A8I7J8              	100.00%		B4KCU9              	100.00%
Bootstrap support for A8I7J8 as seed ortholog is 99%.
Bootstrap support for B4KCU9 as seed ortholog is 99%.

Group of orthologs #1002. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 D.mojavensis:101

A8IR43              	100.00%		B4KKN1              	100.00%
Bootstrap support for A8IR43 as seed ortholog is 99%.
Bootstrap support for B4KKN1 as seed ortholog is 99%.

Group of orthologs #1003. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 D.mojavensis:181

A8JJH8              	100.00%		B4K892              	100.00%
                    	       		B4KDI2              	56.97%
Bootstrap support for A8JJH8 as seed ortholog is 100%.
Bootstrap support for B4K892 as seed ortholog is 100%.

Group of orthologs #1004. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 D.mojavensis:181

A8J5J8              	100.00%		B4L6V7              	100.00%
                    	       		B4KYS7              	5.92%
Bootstrap support for A8J5J8 as seed ortholog is 100%.
Bootstrap support for B4L6V7 as seed ortholog is 100%.

Group of orthologs #1005. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 D.mojavensis:181

A8HN61              	100.00%		B4K5L2              	100.00%
Bootstrap support for A8HN61 as seed ortholog is 100%.
Bootstrap support for B4K5L2 as seed ortholog is 100%.

Group of orthologs #1006. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 D.mojavensis:181

A8HY57              	100.00%		B4KRT4              	100.00%
Bootstrap support for A8HY57 as seed ortholog is 100%.
Bootstrap support for B4KRT4 as seed ortholog is 100%.

Group of orthologs #1007. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 D.mojavensis:132

A8IHQ7              	100.00%		B4KL92              	100.00%
Bootstrap support for A8IHQ7 as seed ortholog is 100%.
Bootstrap support for B4KL92 as seed ortholog is 99%.

Group of orthologs #1008. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 D.mojavensis:181

A8JBC8              	100.00%		B4KGS4              	100.00%
Bootstrap support for A8JBC8 as seed ortholog is 100%.
Bootstrap support for B4KGS4 as seed ortholog is 100%.

Group of orthologs #1009. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:102

A8JEA7              	100.00%		B4KL71              	100.00%
Bootstrap support for A8JEA7 as seed ortholog is 93%.
Bootstrap support for B4KL71 as seed ortholog is 97%.

Group of orthologs #1010. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:181

A8J6T1              	100.00%		B4L309              	100.00%
Bootstrap support for A8J6T1 as seed ortholog is 100%.
Bootstrap support for B4L309 as seed ortholog is 100%.

Group of orthologs #1011. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 D.mojavensis:180

A8IIC5              	100.00%		B4KJ22              	100.00%
                    	       		B4L0G4              	69.75%
Bootstrap support for A8IIC5 as seed ortholog is 100%.
Bootstrap support for B4KJ22 as seed ortholog is 100%.

Group of orthologs #1012. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:75

A8HN23              	100.00%		B4KVV0              	100.00%
                    	       		B4L4R5              	62.61%
Bootstrap support for A8HN23 as seed ortholog is 99%.
Bootstrap support for B4KVV0 as seed ortholog is 99%.

Group of orthologs #1013. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:180

A8IHG6              	100.00%		B4L4E6              	100.00%
Bootstrap support for A8IHG6 as seed ortholog is 99%.
Bootstrap support for B4L4E6 as seed ortholog is 100%.

Group of orthologs #1014. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 D.mojavensis:180

A8IV36              	100.00%		B4L0Q4              	100.00%
Bootstrap support for A8IV36 as seed ortholog is 100%.
Bootstrap support for B4L0Q4 as seed ortholog is 100%.

Group of orthologs #1015. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 D.mojavensis:136

A8JFW5              	100.00%		B4L2C4              	100.00%
Bootstrap support for A8JFW5 as seed ortholog is 100%.
Bootstrap support for B4L2C4 as seed ortholog is 100%.

Group of orthologs #1016. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:74

A8IJ79              	100.00%		B4L3A8              	100.00%
                    	       		B4KPV7              	50.00%
Bootstrap support for A8IJ79 as seed ortholog is 100%.
Bootstrap support for B4L3A8 as seed ortholog is 99%.

Group of orthologs #1017. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:179

A8IMT5              	100.00%		B4KBM1              	100.00%
Bootstrap support for A8IMT5 as seed ortholog is 100%.
Bootstrap support for B4KBM1 as seed ortholog is 100%.

Group of orthologs #1018. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:179

A8JG06              	100.00%		B4KAS5              	100.00%
Bootstrap support for A8JG06 as seed ortholog is 100%.
Bootstrap support for B4KAS5 as seed ortholog is 100%.

Group of orthologs #1019. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:179

A8JFC3              	100.00%		B4KGY0              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for B4KGY0 as seed ortholog is 100%.

Group of orthologs #1020. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:179

A8IJZ6              	100.00%		B4L585              	100.00%
Bootstrap support for A8IJZ6 as seed ortholog is 97%.
Bootstrap support for B4L585 as seed ortholog is 100%.

Group of orthologs #1021. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:179

A8J308              	100.00%		B4KYV3              	100.00%
Bootstrap support for A8J308 as seed ortholog is 100%.
Bootstrap support for B4KYV3 as seed ortholog is 100%.

Group of orthologs #1022. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 D.mojavensis:179

A8JGY2              	100.00%		B4KYH1              	100.00%
Bootstrap support for A8JGY2 as seed ortholog is 100%.
Bootstrap support for B4KYH1 as seed ortholog is 100%.

Group of orthologs #1023. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:178

A8J7F2              	100.00%		B4KN05              	100.00%
                    	       		B4KIY8              	12.24%
                    	       		B4KZK1              	10.02%
Bootstrap support for A8J7F2 as seed ortholog is 78%.
Bootstrap support for B4KN05 as seed ortholog is 100%.

Group of orthologs #1024. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:178

A8HVE0              	100.00%		B4KW53              	100.00%
A8I683              	7.17%		
Bootstrap support for A8HVE0 as seed ortholog is 100%.
Bootstrap support for B4KW53 as seed ortholog is 100%.

Group of orthologs #1025. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:178

A8HMA7              	100.00%		B4K9C0              	100.00%
Bootstrap support for A8HMA7 as seed ortholog is 99%.
Bootstrap support for B4K9C0 as seed ortholog is 100%.

Group of orthologs #1026. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:178

A8HYT4              	100.00%		B4K7J3              	100.00%
Bootstrap support for A8HYT4 as seed ortholog is 100%.
Bootstrap support for B4K7J3 as seed ortholog is 100%.

Group of orthologs #1027. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:178

A8I8K9              	100.00%		B4KMH4              	100.00%
Bootstrap support for A8I8K9 as seed ortholog is 100%.
Bootstrap support for B4KMH4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:178

A8IXP6              	100.00%		B4KGW4              	100.00%
Bootstrap support for A8IXP6 as seed ortholog is 100%.
Bootstrap support for B4KGW4 as seed ortholog is 100%.

Group of orthologs #1029. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:178

A8IQ02              	100.00%		B4KVU0              	100.00%
Bootstrap support for A8IQ02 as seed ortholog is 100%.
Bootstrap support for B4KVU0 as seed ortholog is 100%.

Group of orthologs #1030. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 D.mojavensis:178

A8IF01              	100.00%		B4L1D5              	100.00%
Bootstrap support for A8IF01 as seed ortholog is 100%.
Bootstrap support for B4L1D5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 D.mojavensis:177

A8HMP3              	100.00%		B4K7I9              	100.00%
Bootstrap support for A8HMP3 as seed ortholog is 100%.
Bootstrap support for B4K7I9 as seed ortholog is 100%.

Group of orthologs #1032. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 D.mojavensis:177

A8IVX2              	100.00%		B4KJF0              	100.00%
Bootstrap support for A8IVX2 as seed ortholog is 100%.
Bootstrap support for B4KJF0 as seed ortholog is 100%.

Group of orthologs #1033. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 D.mojavensis:177

A8JB79              	100.00%		B4K6L0              	100.00%
Bootstrap support for A8JB79 as seed ortholog is 70%.
Alternative seed ortholog is A8J5J2 (9 bits away from this cluster)
Bootstrap support for B4K6L0 as seed ortholog is 100%.

Group of orthologs #1034. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:177

A8J1C2              	100.00%		B4KLB6              	100.00%
Bootstrap support for A8J1C2 as seed ortholog is 99%.
Bootstrap support for B4KLB6 as seed ortholog is 100%.

Group of orthologs #1035. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 D.mojavensis:67

A8J513              	100.00%		B4KMC5              	100.00%
                    	       		B4L3R3              	14.74%
Bootstrap support for A8J513 as seed ortholog is 100%.
Bootstrap support for B4KMC5 as seed ortholog is 89%.

Group of orthologs #1036. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:176

A8IAN1              	100.00%		B4KCP2              	100.00%
Bootstrap support for A8IAN1 as seed ortholog is 98%.
Bootstrap support for B4KCP2 as seed ortholog is 100%.

Group of orthologs #1037. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 D.mojavensis:176

A8J2G4              	100.00%		B4K802              	100.00%
Bootstrap support for A8J2G4 as seed ortholog is 100%.
Bootstrap support for B4K802 as seed ortholog is 100%.

Group of orthologs #1038. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 D.mojavensis:83

A8J507              	100.00%		B4KC13              	100.00%
Bootstrap support for A8J507 as seed ortholog is 100%.
Bootstrap support for B4KC13 as seed ortholog is 96%.

Group of orthologs #1039. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 D.mojavensis:176

A8HW43              	100.00%		B4L3S9              	100.00%
Bootstrap support for A8HW43 as seed ortholog is 100%.
Bootstrap support for B4L3S9 as seed ortholog is 100%.

Group of orthologs #1040. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 D.mojavensis:176

A8I8X0              	100.00%		B4L989              	100.00%
Bootstrap support for A8I8X0 as seed ortholog is 85%.
Bootstrap support for B4L989 as seed ortholog is 100%.

Group of orthologs #1041. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:175

A8I3S3              	100.00%		B4KRX5              	100.00%
                    	       		B4KRX1              	42.55%
                    	       		B4KRX2              	39.94%
                    	       		B4KRX3              	33.09%
                    	       		B4KRW6              	32.42%
                    	       		B4KUG2              	32.30%
                    	       		B4KRW5              	32.06%
                    	       		B4KRW9              	31.52%
                    	       		B4KUG3              	30.48%
                    	       		B4KRW7              	29.94%
Bootstrap support for A8I3S3 as seed ortholog is 100%.
Bootstrap support for B4KRX5 as seed ortholog is 100%.

Group of orthologs #1042. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 D.mojavensis:175

A8IEU2              	100.00%		B4KCU7              	100.00%
Bootstrap support for A8IEU2 as seed ortholog is 99%.
Bootstrap support for B4KCU7 as seed ortholog is 100%.

Group of orthologs #1043. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:175

A8HXD0              	100.00%		B4KSJ6              	100.00%
Bootstrap support for A8HXD0 as seed ortholog is 100%.
Bootstrap support for B4KSJ6 as seed ortholog is 100%.

Group of orthologs #1044. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:52

A8J793              	100.00%		B4K8E2              	100.00%
Bootstrap support for A8J793 as seed ortholog is 100%.
Bootstrap support for B4K8E2 as seed ortholog is 88%.

Group of orthologs #1045. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 D.mojavensis:104

A8J8C2              	100.00%		B4KJ72              	100.00%
Bootstrap support for A8J8C2 as seed ortholog is 75%.
Bootstrap support for B4KJ72 as seed ortholog is 97%.

Group of orthologs #1046. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:175

A8IDN7              	100.00%		B4L223              	100.00%
Bootstrap support for A8IDN7 as seed ortholog is 100%.
Bootstrap support for B4L223 as seed ortholog is 100%.

Group of orthologs #1047. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:129

A8IZ68              	100.00%		B4KWD2              	100.00%
Bootstrap support for A8IZ68 as seed ortholog is 100%.
Bootstrap support for B4KWD2 as seed ortholog is 100%.

Group of orthologs #1048. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 D.mojavensis:79

A8J9I5              	100.00%		B4KQK5              	100.00%
Bootstrap support for A8J9I5 as seed ortholog is 61%.
Alternative seed ortholog is A8JEQ5 (15 bits away from this cluster)
Bootstrap support for B4KQK5 as seed ortholog is 89%.

Group of orthologs #1049. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 D.mojavensis:175

A8IIE6              	100.00%		B4L8M6              	100.00%
Bootstrap support for A8IIE6 as seed ortholog is 100%.
Bootstrap support for B4L8M6 as seed ortholog is 100%.

Group of orthologs #1050. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:174

A8I074              	100.00%		B4KBP1              	100.00%
Bootstrap support for A8I074 as seed ortholog is 100%.
Bootstrap support for B4KBP1 as seed ortholog is 100%.

Group of orthologs #1051. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:174

A8HN50              	100.00%		B4KM09              	100.00%
Bootstrap support for A8HN50 as seed ortholog is 100%.
Bootstrap support for B4KM09 as seed ortholog is 100%.

Group of orthologs #1052. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:174

A8HUC3              	100.00%		B4KTD2              	100.00%
Bootstrap support for A8HUC3 as seed ortholog is 100%.
Bootstrap support for B4KTD2 as seed ortholog is 100%.

Group of orthologs #1053. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:124

A8IRR6              	100.00%		B4KY74              	100.00%
Bootstrap support for A8IRR6 as seed ortholog is 100%.
Bootstrap support for B4KY74 as seed ortholog is 100%.

Group of orthologs #1054. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 D.mojavensis:61

A8JDV2              	100.00%		B4KQ03              	100.00%
Bootstrap support for A8JDV2 as seed ortholog is 100%.
Bootstrap support for B4KQ03 as seed ortholog is 99%.

Group of orthologs #1055. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:173

A8JH45              	100.00%		B4KIJ4              	100.00%
                    	       		B4KIJ5              	92.86%
Bootstrap support for A8JH45 as seed ortholog is 100%.
Bootstrap support for B4KIJ4 as seed ortholog is 100%.

Group of orthologs #1056. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 D.mojavensis:173

A8IQE0              	100.00%		B4KCS2              	100.00%
Bootstrap support for A8IQE0 as seed ortholog is 100%.
Bootstrap support for B4KCS2 as seed ortholog is 100%.

Group of orthologs #1057. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 D.mojavensis:173

A8I1C7              	100.00%		B4KVV6              	100.00%
Bootstrap support for A8I1C7 as seed ortholog is 100%.
Bootstrap support for B4KVV6 as seed ortholog is 100%.

Group of orthologs #1058. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 D.mojavensis:173

A8JDH3              	100.00%		B4KY02              	100.00%
Bootstrap support for A8JDH3 as seed ortholog is 100%.
Bootstrap support for B4KY02 as seed ortholog is 100%.

Group of orthologs #1059. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 D.mojavensis:93

A5YU14              	100.00%		B4KPI2              	100.00%
A8JAD2              	34.72%		B4KYR8              	36.43%
                    	       		B4KXW6              	35.59%
                    	       		B4L5Q1              	26.18%
                    	       		B4L6S7              	17.85%
Bootstrap support for A5YU14 as seed ortholog is 99%.
Bootstrap support for B4KPI2 as seed ortholog is 96%.

Group of orthologs #1060. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:75

A8I7J0              	100.00%		B4K985              	100.00%
Bootstrap support for A8I7J0 as seed ortholog is 99%.
Bootstrap support for B4K985 as seed ortholog is 99%.

Group of orthologs #1061. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 D.mojavensis:172

A8J0B8              	100.00%		B4KTT3              	100.00%
Bootstrap support for A8J0B8 as seed ortholog is 100%.
Bootstrap support for B4KTT3 as seed ortholog is 100%.

Group of orthologs #1062. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 D.mojavensis:171

A8IR69              	100.00%		B4K7B3              	100.00%
A8HV98              	97.64%		B4LAY8              	30.43%
A8HWX1              	96.85%		
A8HWE3              	96.06%		
A8HWX5              	96.06%		
A8JIN6              	96.06%		
A8JDE1              	96.06%		
A8JDH1              	94.49%		
A8IJS4              	93.70%		
A8JDC9              	93.70%		
A8IR79              	93.70%		
A8JDC0              	92.91%		
A8IJR6              	88.98%		
A8JJQ6              	87.40%		
A8HSB2              	85.04%		
A8JJS0              	79.53%		
A8IW84              	60.63%		
A8IW75              	60.63%		
A8JJV5              	25.20%		
A8JJN6              	19.69%		
A8JCT1              	6.30%		
Bootstrap support for A8IR69 as seed ortholog is 99%.
Bootstrap support for B4K7B3 as seed ortholog is 100%.

Group of orthologs #1063. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:36

A8J8L4              	100.00%		B4KSC5              	100.00%
                    	       		B4KX98              	33.37%
                    	       		B4KT54              	6.87%
Bootstrap support for A8J8L4 as seed ortholog is 97%.
Bootstrap support for B4KSC5 as seed ortholog is 83%.

Group of orthologs #1064. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 D.mojavensis:171

A8HSJ9              	100.00%		B4KQX7              	100.00%
Bootstrap support for A8HSJ9 as seed ortholog is 100%.
Bootstrap support for B4KQX7 as seed ortholog is 100%.

Group of orthologs #1065. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 D.mojavensis:17

A8I6B9              	100.00%		B4L898              	100.00%
Bootstrap support for A8I6B9 as seed ortholog is 76%.
Bootstrap support for B4L898 as seed ortholog is 69%.
Alternative seed ortholog is B4KCR4 (17 bits away from this cluster)

Group of orthologs #1066. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:170

A8IW47              	100.00%		B4KD48              	100.00%
Bootstrap support for A8IW47 as seed ortholog is 100%.
Bootstrap support for B4KD48 as seed ortholog is 100%.

Group of orthologs #1067. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:170

A8J1K6              	100.00%		B4KAP9              	100.00%
Bootstrap support for A8J1K6 as seed ortholog is 100%.
Bootstrap support for B4KAP9 as seed ortholog is 100%.

Group of orthologs #1068. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:170

A8JH29              	100.00%		B4K9F0              	100.00%
Bootstrap support for A8JH29 as seed ortholog is 100%.
Bootstrap support for B4K9F0 as seed ortholog is 100%.

Group of orthologs #1069. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:170

A8JF38              	100.00%		B4KCU8              	100.00%
Bootstrap support for A8JF38 as seed ortholog is 100%.
Bootstrap support for B4KCU8 as seed ortholog is 100%.

Group of orthologs #1070. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 D.mojavensis:170

A8J1W0              	100.00%		B4L5N6              	100.00%
Bootstrap support for A8J1W0 as seed ortholog is 100%.
Bootstrap support for B4L5N6 as seed ortholog is 100%.

Group of orthologs #1071. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 D.mojavensis:169

A8HVK4              	100.00%		B4KHP5              	100.00%
Bootstrap support for A8HVK4 as seed ortholog is 100%.
Bootstrap support for B4KHP5 as seed ortholog is 100%.

Group of orthologs #1072. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:24

A8HZE6              	100.00%		B4KV76              	100.00%
Bootstrap support for A8HZE6 as seed ortholog is 90%.
Bootstrap support for B4KV76 as seed ortholog is 66%.
Alternative seed ortholog is B4KCP3 (24 bits away from this cluster)

Group of orthologs #1073. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 D.mojavensis:51

A8J587              	100.00%		B4KG60              	100.00%
Bootstrap support for A8J587 as seed ortholog is 90%.
Bootstrap support for B4KG60 as seed ortholog is 91%.

Group of orthologs #1074. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 D.mojavensis:168

A8HMG7              	100.00%		B4KZ05              	100.00%
Bootstrap support for A8HMG7 as seed ortholog is 100%.
Bootstrap support for B4KZ05 as seed ortholog is 100%.

Group of orthologs #1075. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:168

A8JDV9              	100.00%		B4K613              	100.00%
Bootstrap support for A8JDV9 as seed ortholog is 95%.
Bootstrap support for B4K613 as seed ortholog is 100%.

Group of orthologs #1076. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 D.mojavensis:78

A8JHG0              	100.00%		B4K7R6              	100.00%
Bootstrap support for A8JHG0 as seed ortholog is 61%.
Alternative seed ortholog is A8HW48 (29 bits away from this cluster)
Bootstrap support for B4K7R6 as seed ortholog is 97%.

Group of orthologs #1077. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:35

A8JF99              	100.00%		B4KME7              	100.00%
Bootstrap support for A8JF99 as seed ortholog is 98%.
Bootstrap support for B4KME7 as seed ortholog is 92%.

Group of orthologs #1078. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 D.mojavensis:45

A8J757              	100.00%		B4KWB5              	100.00%
Bootstrap support for A8J757 as seed ortholog is 100%.
Bootstrap support for B4KWB5 as seed ortholog is 98%.

Group of orthologs #1079. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 D.mojavensis:168

A8JBU8              	100.00%		B4LAD3              	100.00%
Bootstrap support for A8JBU8 as seed ortholog is 100%.
Bootstrap support for B4LAD3 as seed ortholog is 100%.

Group of orthologs #1080. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 D.mojavensis:167

A8HPM9              	100.00%		B4KGC2              	100.00%
Bootstrap support for A8HPM9 as seed ortholog is 100%.
Bootstrap support for B4KGC2 as seed ortholog is 100%.

Group of orthologs #1081. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 D.mojavensis:167

A8J977              	100.00%		B4K4Y7              	100.00%
Bootstrap support for A8J977 as seed ortholog is 51%.
Alternative seed ortholog is A8I9R1 (1 bits away from this cluster)
Bootstrap support for B4K4Y7 as seed ortholog is 100%.

Group of orthologs #1082. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 D.mojavensis:110

A8J212              	100.00%		B4KC06              	100.00%
Bootstrap support for A8J212 as seed ortholog is 100%.
Bootstrap support for B4KC06 as seed ortholog is 99%.

Group of orthologs #1083. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 D.mojavensis:49

A8HNR0              	100.00%		B4K914              	100.00%
A8ITR3              	41.43%		B4L5A8              	100.00%
                    	       		B4L6S6              	23.89%
                    	       		B4KQR3              	16.15%
                    	       		B4KCY7              	15.60%
                    	       		B4KPP3              	13.61%
                    	       		B4L041              	10.62%
                    	       		B4KPT8              	8.30%
                    	       		B4KCQ1              	6.53%
                    	       		B4K765              	5.20%
Bootstrap support for A8HNR0 as seed ortholog is 100%.
Bootstrap support for B4K914 as seed ortholog is 97%.
Bootstrap support for B4L5A8 as seed ortholog is 85%.

Group of orthologs #1084. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:50

A8IDM5              	100.00%		B4KCB7              	100.00%
Bootstrap support for A8IDM5 as seed ortholog is 98%.
Bootstrap support for B4KCB7 as seed ortholog is 91%.

Group of orthologs #1085. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 D.mojavensis:19

A8HP50              	100.00%		B4L5X5              	100.00%
Bootstrap support for A8HP50 as seed ortholog is 100%.
Bootstrap support for B4L5X5 as seed ortholog is 69%.
Alternative seed ortholog is B4KZX1 (19 bits away from this cluster)

Group of orthologs #1086. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 D.mojavensis:166

A8J6Q9              	100.00%		B4KLX2              	100.00%
Bootstrap support for A8J6Q9 as seed ortholog is 100%.
Bootstrap support for B4KLX2 as seed ortholog is 100%.

Group of orthologs #1087. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:166

A8IYP2              	100.00%		B4L3Q0              	100.00%
Bootstrap support for A8IYP2 as seed ortholog is 99%.
Bootstrap support for B4L3Q0 as seed ortholog is 100%.

Group of orthologs #1088. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 D.mojavensis:166

A8J304              	100.00%		B4L994              	100.00%
Bootstrap support for A8J304 as seed ortholog is 100%.
Bootstrap support for B4L994 as seed ortholog is 100%.

Group of orthologs #1089. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:43

A8J0I1              	100.00%		B4KP49              	100.00%
A8J0G9              	100.00%		B4KNQ7              	100.00%
                    	       		B4KP47              	100.00%
                    	       		B4KP46              	81.74%
                    	       		B4KP48              	40.47%
                    	       		B4KP45              	35.93%
                    	       		B4LAF2              	20.35%
                    	       		B4KAC7              	17.95%
                    	       		B4KQJ5              	15.09%
                    	       		B4KF07              	10.93%
                    	       		B4KNF6              	10.76%
                    	       		B4KSZ4              	8.16%
Bootstrap support for A8J0I1 as seed ortholog is 92%.
Bootstrap support for A8J0G9 as seed ortholog is 75%.
Bootstrap support for B4KP49 as seed ortholog is 65%.
Alternative seed ortholog is B4KTY6 (43 bits away from this cluster)
Bootstrap support for B4KNQ7 as seed ortholog is 50%.
Alternative seed ortholog is B4KTY6 (43 bits away from this cluster)
Bootstrap support for B4KP47 as seed ortholog is 59%.
Alternative seed ortholog is B4KTY6 (43 bits away from this cluster)

Group of orthologs #1090. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:55

Q6UPR1              	100.00%		B4K7V4              	100.00%
A8HWF0              	9.11%		B4KT41              	10.65%
A8IHF8              	6.23%		B4KU67              	8.38%
Bootstrap support for Q6UPR1 as seed ortholog is 99%.
Bootstrap support for B4K7V4 as seed ortholog is 95%.

Group of orthologs #1091. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8JAI8              	100.00%		B4KHX0              	100.00%
                    	       		B4KL49              	31.84%
Bootstrap support for A8JAI8 as seed ortholog is 100%.
Bootstrap support for B4KHX0 as seed ortholog is 100%.

Group of orthologs #1092. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8IM89              	100.00%		B4KHS4              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for B4KHS4 as seed ortholog is 100%.

Group of orthologs #1093. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8ITV6              	100.00%		B4KKX7              	100.00%
Bootstrap support for A8ITV6 as seed ortholog is 100%.
Bootstrap support for B4KKX7 as seed ortholog is 100%.

Group of orthologs #1094. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8I9E8              	100.00%		B4KX49              	100.00%
Bootstrap support for A8I9E8 as seed ortholog is 100%.
Bootstrap support for B4KX49 as seed ortholog is 100%.

Group of orthologs #1095. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8JBX6              	100.00%		B4KNF0              	100.00%
Bootstrap support for A8JBX6 as seed ortholog is 100%.
Bootstrap support for B4KNF0 as seed ortholog is 100%.

Group of orthologs #1096. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8JHV3              	100.00%		B4KI02              	100.00%
Bootstrap support for A8JHV3 as seed ortholog is 100%.
Bootstrap support for B4KI02 as seed ortholog is 100%.

Group of orthologs #1097. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:165

A8J6Q1              	100.00%		B4KZP2              	100.00%
Bootstrap support for A8J6Q1 as seed ortholog is 99%.
Bootstrap support for B4KZP2 as seed ortholog is 100%.

Group of orthologs #1098. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 D.mojavensis:165

A8J239              	100.00%		B4L968              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for B4L968 as seed ortholog is 100%.

Group of orthologs #1099. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:85

A8JFH6              	100.00%		B4KZ70              	100.00%
Bootstrap support for A8JFH6 as seed ortholog is 99%.
Bootstrap support for B4KZ70 as seed ortholog is 98%.

Group of orthologs #1100. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 D.mojavensis:20

A8J4U2              	100.00%		B4K4Y3              	100.00%
Bootstrap support for A8J4U2 as seed ortholog is 75%.
Bootstrap support for B4K4Y3 as seed ortholog is 72%.
Alternative seed ortholog is B4KTU4 (20 bits away from this cluster)

Group of orthologs #1101. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 D.mojavensis:164

A8I7Y8              	100.00%		B4KQT7              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for B4KQT7 as seed ortholog is 100%.

Group of orthologs #1102. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:164

A8J8M9              	100.00%		B4K8W6              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 100%.
Bootstrap support for B4K8W6 as seed ortholog is 100%.

Group of orthologs #1103. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 D.mojavensis:164

A8JBY2              	100.00%		B4KC61              	100.00%
Bootstrap support for A8JBY2 as seed ortholog is 100%.
Bootstrap support for B4KC61 as seed ortholog is 100%.

Group of orthologs #1104. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 D.mojavensis:164

A8JBA8              	100.00%		B4L9D1              	100.00%
Bootstrap support for A8JBA8 as seed ortholog is 100%.
Bootstrap support for B4L9D1 as seed ortholog is 100%.

Group of orthologs #1105. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8I5J8              	100.00%		B4L1S1              	100.00%
A8I7X6              	27.10%		
Bootstrap support for A8I5J8 as seed ortholog is 100%.
Bootstrap support for B4L1S1 as seed ortholog is 100%.

Group of orthologs #1106. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 D.mojavensis:74

A8IQ65              	100.00%		B4K6U1              	100.00%
Bootstrap support for A8IQ65 as seed ortholog is 99%.
Bootstrap support for B4K6U1 as seed ortholog is 99%.

Group of orthologs #1107. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8ISK2              	100.00%		B4KAG6              	100.00%
Bootstrap support for A8ISK2 as seed ortholog is 100%.
Bootstrap support for B4KAG6 as seed ortholog is 100%.

Group of orthologs #1108. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8IKL2              	100.00%		B4KET6              	100.00%
Bootstrap support for A8IKL2 as seed ortholog is 100%.
Bootstrap support for B4KET6 as seed ortholog is 100%.

Group of orthologs #1109. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8HXH0              	100.00%		B4KN89              	100.00%
Bootstrap support for A8HXH0 as seed ortholog is 100%.
Bootstrap support for B4KN89 as seed ortholog is 100%.

Group of orthologs #1110. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8JA17              	100.00%		B4K7P7              	100.00%
Bootstrap support for A8JA17 as seed ortholog is 100%.
Bootstrap support for B4K7P7 as seed ortholog is 100%.

Group of orthologs #1111. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:10

A8J6S1              	100.00%		B4KE05              	100.00%
Bootstrap support for A8J6S1 as seed ortholog is 99%.
Bootstrap support for B4KE05 as seed ortholog is 59%.
Alternative seed ortholog is B4KTD3 (10 bits away from this cluster)

Group of orthologs #1112. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8IF92              	100.00%		B4KWB7              	100.00%
Bootstrap support for A8IF92 as seed ortholog is 100%.
Bootstrap support for B4KWB7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8JBT8              	100.00%		B4KBG2              	100.00%
Bootstrap support for A8JBT8 as seed ortholog is 100%.
Bootstrap support for B4KBG2 as seed ortholog is 100%.

Group of orthologs #1114. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8IVC2              	100.00%		B4KUR7              	100.00%
Bootstrap support for A8IVC2 as seed ortholog is 100%.
Bootstrap support for B4KUR7 as seed ortholog is 100%.

Group of orthologs #1115. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8IZ01              	100.00%		B4KZN5              	100.00%
Bootstrap support for A8IZ01 as seed ortholog is 100%.
Bootstrap support for B4KZN5 as seed ortholog is 100%.

Group of orthologs #1116. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

A8J950              	100.00%		B4KYX5              	100.00%
Bootstrap support for A8J950 as seed ortholog is 100%.
Bootstrap support for B4KYX5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 D.mojavensis:163

A8JGJ7              	100.00%		B4KWE5              	100.00%
Bootstrap support for A8JGJ7 as seed ortholog is 85%.
Bootstrap support for B4KWE5 as seed ortholog is 100%.

Group of orthologs #1118. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 D.mojavensis:163

Q5K1Y0              	100.00%		B4L5R4              	100.00%
Bootstrap support for Q5K1Y0 as seed ortholog is 100%.
Bootstrap support for B4L5R4 as seed ortholog is 100%.

Group of orthologs #1119. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 D.mojavensis:162

A8HVV2              	100.00%		B4L2S6              	100.00%
                    	       		B4KUT4              	26.68%
Bootstrap support for A8HVV2 as seed ortholog is 100%.
Bootstrap support for B4L2S6 as seed ortholog is 100%.

Group of orthologs #1120. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:162

A8J0A1              	100.00%		B4L9G8              	100.00%
A8IZB6              	6.27%		
Bootstrap support for A8J0A1 as seed ortholog is 99%.
Bootstrap support for B4L9G8 as seed ortholog is 100%.

Group of orthologs #1121. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 D.mojavensis:162

Q2XQY7              	100.00%		B4KK86              	100.00%
Bootstrap support for Q2XQY7 as seed ortholog is 100%.
Bootstrap support for B4KK86 as seed ortholog is 100%.

Group of orthologs #1122. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 D.mojavensis:162

A8JGK1              	100.00%		B4KVV2              	100.00%
Bootstrap support for A8JGK1 as seed ortholog is 100%.
Bootstrap support for B4KVV2 as seed ortholog is 100%.

Group of orthologs #1123. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:161

A8IA37              	100.00%		B4KA83              	100.00%
                    	       		B4KA81              	45.15%
                    	       		B4KA82              	36.72%
                    	       		B4K8N1              	19.40%
                    	       		B4K5Y1              	17.59%
                    	       		B4L8V4              	16.53%
                    	       		B4K977              	13.83%
                    	       		B4KE37              	13.78%
                    	       		B4K976              	12.98%
                    	       		B4K975              	12.93%
                    	       		B4KBT0              	12.88%
                    	       		B4K772              	10.76%
                    	       		B4K978              	7.90%
                    	       		B4K974              	7.74%
                    	       		B4KS45              	7.10%
                    	       		B4K980              	6.25%
Bootstrap support for A8IA37 as seed ortholog is 100%.
Bootstrap support for B4KA83 as seed ortholog is 100%.

Group of orthologs #1124. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:14

A8HPH8              	100.00%		B4KUJ7              	100.00%
Bootstrap support for A8HPH8 as seed ortholog is 100%.
Bootstrap support for B4KUJ7 as seed ortholog is 65%.
Alternative seed ortholog is B4KXR6 (14 bits away from this cluster)

Group of orthologs #1125. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:161

A8I3E7              	100.00%		B4KUR1              	100.00%
Bootstrap support for A8I3E7 as seed ortholog is 100%.
Bootstrap support for B4KUR1 as seed ortholog is 100%.

Group of orthologs #1126. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:161

A8J9S8              	100.00%		B4K8A8              	100.00%
Bootstrap support for A8J9S8 as seed ortholog is 100%.
Bootstrap support for B4K8A8 as seed ortholog is 100%.

Group of orthologs #1127. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:161

A8ICF7              	100.00%		B4KT63              	100.00%
Bootstrap support for A8ICF7 as seed ortholog is 100%.
Bootstrap support for B4KT63 as seed ortholog is 100%.

Group of orthologs #1128. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 D.mojavensis:161

A8J5A8              	100.00%		B4KQ65              	100.00%
Bootstrap support for A8J5A8 as seed ortholog is 100%.
Bootstrap support for B4KQ65 as seed ortholog is 100%.

Group of orthologs #1129. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:56

A8JHF0              	100.00%		B4KV24              	100.00%
Bootstrap support for A8JHF0 as seed ortholog is 94%.
Bootstrap support for B4KV24 as seed ortholog is 92%.

Group of orthologs #1130. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:160

A8JFT7              	100.00%		B4KGJ6              	100.00%
A8JFT6              	80.09%		B4KGT4              	5.03%
Bootstrap support for A8JFT7 as seed ortholog is 100%.
Bootstrap support for B4KGJ6 as seed ortholog is 100%.

Group of orthologs #1131. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 D.mojavensis:20

A8IRE4              	100.00%		B4KA52              	100.00%
A8IL34              	17.78%		
Bootstrap support for A8IRE4 as seed ortholog is 59%.
Alternative seed ortholog is A8HSB7 (8 bits away from this cluster)
Bootstrap support for B4KA52 as seed ortholog is 70%.
Alternative seed ortholog is B4KEP1 (20 bits away from this cluster)

Group of orthologs #1132. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 D.mojavensis:76

A8IPJ0              	100.00%		B4KFE7              	100.00%
                    	       		B4KFE6              	45.84%
Bootstrap support for A8IPJ0 as seed ortholog is 83%.
Bootstrap support for B4KFE7 as seed ortholog is 97%.

Group of orthologs #1133. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:160

A8I297              	100.00%		B4L8X4              	100.00%
                    	       		B4L7D1              	55.42%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for B4L8X4 as seed ortholog is 100%.

Group of orthologs #1134. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:160

A8IY13              	100.00%		B4KHU0              	100.00%
Bootstrap support for A8IY13 as seed ortholog is 100%.
Bootstrap support for B4KHU0 as seed ortholog is 100%.

Group of orthologs #1135. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:160

A8I1Y7              	100.00%		B4KXR4              	100.00%
Bootstrap support for A8I1Y7 as seed ortholog is 100%.
Bootstrap support for B4KXR4 as seed ortholog is 100%.

Group of orthologs #1136. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:160

A8HVC8              	100.00%		B4L575              	100.00%
Bootstrap support for A8HVC8 as seed ortholog is 100%.
Bootstrap support for B4L575 as seed ortholog is 100%.

Group of orthologs #1137. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 D.mojavensis:72

A8J8V0              	100.00%		B4KST4              	100.00%
Bootstrap support for A8J8V0 as seed ortholog is 65%.
Alternative seed ortholog is A8IWM0 (11 bits away from this cluster)
Bootstrap support for B4KST4 as seed ortholog is 98%.

Group of orthologs #1138. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:160

A8J8S7              	100.00%		B4L1M5              	100.00%
Bootstrap support for A8J8S7 as seed ortholog is 100%.
Bootstrap support for B4L1M5 as seed ortholog is 100%.

Group of orthologs #1139. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 D.mojavensis:41

A8J409              	100.00%		B4L7A6              	100.00%
Bootstrap support for A8J409 as seed ortholog is 100%.
Bootstrap support for B4L7A6 as seed ortholog is 79%.

Group of orthologs #1140. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:36

A8HYY7              	100.00%		B4L621              	100.00%
                    	       		B4KCQ0              	31.68%
Bootstrap support for A8HYY7 as seed ortholog is 94%.
Bootstrap support for B4L621 as seed ortholog is 88%.

Group of orthologs #1141. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:159

A8IND8              	100.00%		B4KXN1              	100.00%
A8IVA8              	6.32%		
Bootstrap support for A8IND8 as seed ortholog is 97%.
Bootstrap support for B4KXN1 as seed ortholog is 100%.

Group of orthologs #1142. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 D.mojavensis:159

A8IA96              	100.00%		B4KJ94              	100.00%
Bootstrap support for A8IA96 as seed ortholog is 100%.
Bootstrap support for B4KJ94 as seed ortholog is 100%.

Group of orthologs #1143. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 D.mojavensis:159

A8I0I1              	100.00%		B4KTE7              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for B4KTE7 as seed ortholog is 100%.

Group of orthologs #1144. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 D.mojavensis:96

A8J344              	100.00%		B4KAM7              	100.00%
Bootstrap support for A8J344 as seed ortholog is 100%.
Bootstrap support for B4KAM7 as seed ortholog is 99%.

Group of orthologs #1145. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 D.mojavensis:159

A8HZJ8              	100.00%		B4L6I0              	100.00%
Bootstrap support for A8HZJ8 as seed ortholog is 100%.
Bootstrap support for B4L6I0 as seed ortholog is 100%.

Group of orthologs #1146. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 D.mojavensis:159

A8J924              	100.00%		B4KMG9              	100.00%
Bootstrap support for A8J924 as seed ortholog is 83%.
Bootstrap support for B4KMG9 as seed ortholog is 100%.

Group of orthologs #1147. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 D.mojavensis:159

A8ICT1              	100.00%		B4L7N0              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for B4L7N0 as seed ortholog is 100%.

Group of orthologs #1148. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 D.mojavensis:159

A8J0V7              	100.00%		B4L7Z2              	100.00%
Bootstrap support for A8J0V7 as seed ortholog is 100%.
Bootstrap support for B4L7Z2 as seed ortholog is 100%.

Group of orthologs #1149. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 D.mojavensis:158

Q7XJ66              	100.00%		B4L2V1              	100.00%
Q84XW3              	33.65%		
A8HN02              	10.10%		
A8JFB4              	8.65%		
Bootstrap support for Q7XJ66 as seed ortholog is 100%.
Bootstrap support for B4L2V1 as seed ortholog is 100%.

Group of orthologs #1150. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 D.mojavensis:158

A8JB85              	100.00%		B4L2S7              	100.00%
                    	       		B4KDQ1              	53.93%
Bootstrap support for A8JB85 as seed ortholog is 100%.
Bootstrap support for B4L2S7 as seed ortholog is 100%.

Group of orthologs #1151. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 D.mojavensis:158

A8IRF7              	100.00%		B4K7Y3              	100.00%
Bootstrap support for A8IRF7 as seed ortholog is 100%.
Bootstrap support for B4K7Y3 as seed ortholog is 100%.

Group of orthologs #1152. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:158

A8IAG8              	100.00%		B4KTA6              	100.00%
Bootstrap support for A8IAG8 as seed ortholog is 86%.
Bootstrap support for B4KTA6 as seed ortholog is 100%.

Group of orthologs #1153. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 D.mojavensis:158

A8JBE3              	100.00%		B4KU57              	100.00%
Bootstrap support for A8JBE3 as seed ortholog is 100%.
Bootstrap support for B4KU57 as seed ortholog is 100%.

Group of orthologs #1154. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 D.mojavensis:158

A8IUH9              	100.00%		B4L8V9              	100.00%
Bootstrap support for A8IUH9 as seed ortholog is 100%.
Bootstrap support for B4L8V9 as seed ortholog is 100%.

Group of orthologs #1155. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 D.mojavensis:157

A8HSJ6              	100.00%		B4KC08              	100.00%
Bootstrap support for A8HSJ6 as seed ortholog is 100%.
Bootstrap support for B4KC08 as seed ortholog is 100%.

Group of orthologs #1156. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:157

A8J7F5              	100.00%		B4KVQ9              	100.00%
Bootstrap support for A8J7F5 as seed ortholog is 100%.
Bootstrap support for B4KVQ9 as seed ortholog is 100%.

Group of orthologs #1157. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:64

A8J4E2              	100.00%		B4KMN3              	100.00%
                    	       		B4KFK5              	20.33%
                    	       		B4L557              	6.64%
Bootstrap support for A8J4E2 as seed ortholog is 100%.
Bootstrap support for B4KMN3 as seed ortholog is 95%.

Group of orthologs #1158. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:156

A8J7D5              	100.00%		B4KHL4              	100.00%
Bootstrap support for A8J7D5 as seed ortholog is 100%.
Bootstrap support for B4KHL4 as seed ortholog is 100%.

Group of orthologs #1159. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:156

A8J3H9              	100.00%		B4KWV0              	100.00%
Bootstrap support for A8J3H9 as seed ortholog is 100%.
Bootstrap support for B4KWV0 as seed ortholog is 100%.

Group of orthologs #1160. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:156

A8J763              	100.00%		B4KV60              	100.00%
Bootstrap support for A8J763 as seed ortholog is 100%.
Bootstrap support for B4KV60 as seed ortholog is 100%.

Group of orthologs #1161. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 D.mojavensis:30

A8J0D7              	100.00%		B4L8X2              	100.00%
Bootstrap support for A8J0D7 as seed ortholog is 100%.
Bootstrap support for B4L8X2 as seed ortholog is 64%.
Alternative seed ortholog is B4L8U4 (30 bits away from this cluster)

Group of orthologs #1162. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:155

A8IRW9              	100.00%		B4KNS9              	100.00%
A8IRW7              	11.57%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for B4KNS9 as seed ortholog is 100%.

Group of orthologs #1163. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:68

A8HMC1              	100.00%		B4L827              	100.00%
                    	       		B4L1K3              	37.64%
Bootstrap support for A8HMC1 as seed ortholog is 56%.
Alternative seed ortholog is A8I9D0 (45 bits away from this cluster)
Bootstrap support for B4L827 as seed ortholog is 94%.

Group of orthologs #1164. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:95

A8HQM1              	100.00%		B4KB32              	100.00%
Bootstrap support for A8HQM1 as seed ortholog is 100%.
Bootstrap support for B4KB32 as seed ortholog is 99%.

Group of orthologs #1165. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:155

A8J2V3              	100.00%		B4K6V0              	100.00%
Bootstrap support for A8J2V3 as seed ortholog is 100%.
Bootstrap support for B4K6V0 as seed ortholog is 100%.

Group of orthologs #1166. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:155

A8HUK0              	100.00%		B4KU60              	100.00%
Bootstrap support for A8HUK0 as seed ortholog is 99%.
Bootstrap support for B4KU60 as seed ortholog is 100%.

Group of orthologs #1167. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:155

A8IE44              	100.00%		B4L173              	100.00%
Bootstrap support for A8IE44 as seed ortholog is 100%.
Bootstrap support for B4L173 as seed ortholog is 100%.

Group of orthologs #1168. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:155

A8IU80              	100.00%		B4KZ07              	100.00%
Bootstrap support for A8IU80 as seed ortholog is 100%.
Bootstrap support for B4KZ07 as seed ortholog is 100%.

Group of orthologs #1169. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:155

A8J2N1              	100.00%		B4L711              	100.00%
Bootstrap support for A8J2N1 as seed ortholog is 100%.
Bootstrap support for B4L711 as seed ortholog is 100%.

Group of orthologs #1170. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 D.mojavensis:155

A8JET7              	100.00%		B4KXK2              	100.00%
Bootstrap support for A8JET7 as seed ortholog is 100%.
Bootstrap support for B4KXK2 as seed ortholog is 100%.

Group of orthologs #1171. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:112

Q8VZX3              	100.00%		B4KXE4              	100.00%
Bootstrap support for Q8VZX3 as seed ortholog is 100%.
Bootstrap support for B4KXE4 as seed ortholog is 100%.

Group of orthologs #1172. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:58

A8JBP5              	100.00%		B4KR66              	100.00%
                    	       		B4KAI1              	19.84%
Bootstrap support for A8JBP5 as seed ortholog is 94%.
Bootstrap support for B4KR66 as seed ortholog is 95%.

Group of orthologs #1173. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:59

A8J2A5              	100.00%		B4K4V6              	100.00%
Bootstrap support for A8J2A5 as seed ortholog is 86%.
Bootstrap support for B4K4V6 as seed ortholog is 96%.

Group of orthologs #1174. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 D.mojavensis:154

A8I9U6              	100.00%		B4KNJ1              	100.00%
Bootstrap support for A8I9U6 as seed ortholog is 100%.
Bootstrap support for B4KNJ1 as seed ortholog is 100%.

Group of orthologs #1175. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 D.mojavensis:61

A8JCW5              	100.00%		B4K8J9              	100.00%
                    	       		B4KZ61              	100.00%
                    	       		B4KZ62              	100.00%
                    	       		B4KPY5              	23.93%
                    	       		B4KPX6              	23.83%
                    	       		B4KVY3              	22.89%
                    	       		B4KVY5              	22.79%
                    	       		B4KSH7              	22.48%
                    	       		B4KSI3              	19.56%
Bootstrap support for A8JCW5 as seed ortholog is 81%.
Bootstrap support for B4K8J9 as seed ortholog is 94%.
Bootstrap support for B4KZ61 as seed ortholog is 95%.
Bootstrap support for B4KZ62 as seed ortholog is 94%.

Group of orthologs #1176. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:153

A8I032              	100.00%		B4K4E3              	100.00%
                    	       		B4KLH4              	100.00%
                    	       		B4KCL5              	29.15%
                    	       		B4KCL8              	20.10%
Bootstrap support for A8I032 as seed ortholog is 100%.
Bootstrap support for B4K4E3 as seed ortholog is 100%.
Bootstrap support for B4KLH4 as seed ortholog is 100%.

Group of orthologs #1177. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:153

A8J4K2              	100.00%		B4KWZ1              	100.00%
A8HVF8              	10.81%		
Bootstrap support for A8J4K2 as seed ortholog is 100%.
Bootstrap support for B4KWZ1 as seed ortholog is 100%.

Group of orthologs #1178. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:153

A8IWL0              	100.00%		B4KGB3              	100.00%
Bootstrap support for A8IWL0 as seed ortholog is 100%.
Bootstrap support for B4KGB3 as seed ortholog is 100%.

Group of orthologs #1179. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:25

A8J5T0              	100.00%		B4KG55              	100.00%
Bootstrap support for A8J5T0 as seed ortholog is 100%.
Bootstrap support for B4KG55 as seed ortholog is 92%.

Group of orthologs #1180. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:153

A8JFC7              	100.00%		B4K7Z5              	100.00%
Bootstrap support for A8JFC7 as seed ortholog is 100%.
Bootstrap support for B4K7Z5 as seed ortholog is 100%.

Group of orthologs #1181. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:153

A8J1L5              	100.00%		B4KUK0              	100.00%
Bootstrap support for A8J1L5 as seed ortholog is 100%.
Bootstrap support for B4KUK0 as seed ortholog is 100%.

Group of orthologs #1182. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:106

A8J9T0              	100.00%		B4L0J2              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for B4L0J2 as seed ortholog is 100%.

Group of orthologs #1183. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 D.mojavensis:42

A8J4Q3              	100.00%		B4L809              	100.00%
Bootstrap support for A8J4Q3 as seed ortholog is 100%.
Bootstrap support for B4L809 as seed ortholog is 92%.

Group of orthologs #1184. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:152

A8JHJ0              	100.00%		B4KIE4              	100.00%
A8I5J0              	11.78%		
A8HZN7              	8.98%		
Bootstrap support for A8JHJ0 as seed ortholog is 97%.
Bootstrap support for B4KIE4 as seed ortholog is 100%.

Group of orthologs #1185. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:152

A8I108              	100.00%		B4KAE5              	100.00%
A8JCA4              	28.02%		
Bootstrap support for A8I108 as seed ortholog is 98%.
Bootstrap support for B4KAE5 as seed ortholog is 100%.

Group of orthologs #1186. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 D.mojavensis:152

Q70ZL8              	100.00%		B4KY40              	100.00%
A8J0K1              	78.91%		
Bootstrap support for Q70ZL8 as seed ortholog is 100%.
Bootstrap support for B4KY40 as seed ortholog is 100%.

Group of orthologs #1187. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 D.mojavensis:152

A8ITI4              	100.00%		B4KCN1              	100.00%
Bootstrap support for A8ITI4 as seed ortholog is 100%.
Bootstrap support for B4KCN1 as seed ortholog is 100%.

Group of orthologs #1188. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 D.mojavensis:152

A8IWB5              	100.00%		B4KKX2              	100.00%
Bootstrap support for A8IWB5 as seed ortholog is 100%.
Bootstrap support for B4KKX2 as seed ortholog is 100%.

Group of orthologs #1189. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 D.mojavensis:152

A8I2Y4              	100.00%		B4L3M6              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for B4L3M6 as seed ortholog is 100%.

Group of orthologs #1190. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:60

A8JG78              	100.00%		B4KYM9              	100.00%
Bootstrap support for A8JG78 as seed ortholog is 99%.
Bootstrap support for B4KYM9 as seed ortholog is 93%.

Group of orthologs #1191. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 D.mojavensis:151

A8I9Z4              	100.00%		B4KBZ4              	100.00%
Bootstrap support for A8I9Z4 as seed ortholog is 100%.
Bootstrap support for B4KBZ4 as seed ortholog is 100%.

Group of orthologs #1192. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 D.mojavensis:15

A8IZB7              	100.00%		B4K6D7              	100.00%
Bootstrap support for A8IZB7 as seed ortholog is 69%.
Alternative seed ortholog is A8IIS4 (13 bits away from this cluster)
Bootstrap support for B4K6D7 as seed ortholog is 71%.
Alternative seed ortholog is B4KXG0 (15 bits away from this cluster)

Group of orthologs #1193. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 D.mojavensis:151

A8J7E2              	100.00%		B4KX67              	100.00%
Bootstrap support for A8J7E2 as seed ortholog is 100%.
Bootstrap support for B4KX67 as seed ortholog is 100%.

Group of orthologs #1194. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:150

A8IB39              	100.00%		B4KIP8              	100.00%
A8IH70              	17.42%		B4KJY6              	37.89%
                    	       		B4KZC6              	9.13%
                    	       		B4L2A7              	8.30%
Bootstrap support for A8IB39 as seed ortholog is 100%.
Bootstrap support for B4KIP8 as seed ortholog is 100%.

Group of orthologs #1195. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:150

A8JE06              	100.00%		B4K7J0              	100.00%
                    	       		B4KZT5              	73.78%
Bootstrap support for A8JE06 as seed ortholog is 100%.
Bootstrap support for B4K7J0 as seed ortholog is 100%.

Group of orthologs #1196. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:150

A8II85              	100.00%		B4KUF5              	100.00%
                    	       		B4L4G4              	97.56%
Bootstrap support for A8II85 as seed ortholog is 100%.
Bootstrap support for B4KUF5 as seed ortholog is 100%.

Group of orthologs #1197. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 D.mojavensis:42

O24451              	100.00%		B4KJH1              	100.00%
A8IT08              	96.58%		
Bootstrap support for O24451 as seed ortholog is 78%.
Bootstrap support for B4KJH1 as seed ortholog is 85%.

Group of orthologs #1198. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:150

A8I6W9              	100.00%		B4KKU2              	100.00%
Bootstrap support for A8I6W9 as seed ortholog is 100%.
Bootstrap support for B4KKU2 as seed ortholog is 100%.

Group of orthologs #1199. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:150

A8J7M4              	100.00%		B4KGQ3              	100.00%
Bootstrap support for A8J7M4 as seed ortholog is 100%.
Bootstrap support for B4KGQ3 as seed ortholog is 100%.

Group of orthologs #1200. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:28

A8JC79              	100.00%		B4KPN0              	100.00%
Bootstrap support for A8JC79 as seed ortholog is 100%.
Bootstrap support for B4KPN0 as seed ortholog is 98%.

Group of orthologs #1201. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:150

A8JD32              	100.00%		B4KSY6              	100.00%
Bootstrap support for A8JD32 as seed ortholog is 99%.
Bootstrap support for B4KSY6 as seed ortholog is 100%.

Group of orthologs #1202. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 D.mojavensis:150

Q9M6B0              	100.00%		B4KYV2              	100.00%
Bootstrap support for Q9M6B0 as seed ortholog is 100%.
Bootstrap support for B4KYV2 as seed ortholog is 100%.

Group of orthologs #1203. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:149

A8HQL2              	100.00%		B4KAQ2              	100.00%
                    	       		B4KF59              	11.08%
                    	       		B4KL56              	10.37%
                    	       		B4KNB0              	9.44%
Bootstrap support for A8HQL2 as seed ortholog is 100%.
Bootstrap support for B4KAQ2 as seed ortholog is 100%.

Group of orthologs #1204. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:149

A8JC41              	100.00%		B4L6R8              	100.00%
                    	       		B4L6S0              	58.00%
                    	       		B4L6R9              	56.61%
Bootstrap support for A8JC41 as seed ortholog is 88%.
Bootstrap support for B4L6R8 as seed ortholog is 100%.

Group of orthologs #1205. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:65

A8IZ24              	100.00%		B4L677              	100.00%
                    	       		B4KH79              	6.45%
Bootstrap support for A8IZ24 as seed ortholog is 100%.
Bootstrap support for B4L677 as seed ortholog is 99%.

Group of orthologs #1206. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:149

A8HQM6              	100.00%		B4K7Z3              	100.00%
Bootstrap support for A8HQM6 as seed ortholog is 100%.
Bootstrap support for B4K7Z3 as seed ortholog is 100%.

Group of orthologs #1207. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:149

A8HMV2              	100.00%		B4KP22              	100.00%
Bootstrap support for A8HMV2 as seed ortholog is 100%.
Bootstrap support for B4KP22 as seed ortholog is 100%.

Group of orthologs #1208. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:149

A8IYR2              	100.00%		B4KCW4              	100.00%
Bootstrap support for A8IYR2 as seed ortholog is 100%.
Bootstrap support for B4KCW4 as seed ortholog is 100%.

Group of orthologs #1209. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:57

A8J7X1              	100.00%		B4KEQ9              	100.00%
Bootstrap support for A8J7X1 as seed ortholog is 99%.
Bootstrap support for B4KEQ9 as seed ortholog is 93%.

Group of orthologs #1210. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:70

A8J1W4              	100.00%		B4KQ40              	100.00%
Bootstrap support for A8J1W4 as seed ortholog is 99%.
Bootstrap support for B4KQ40 as seed ortholog is 97%.

Group of orthologs #1211. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:149

A8JED2              	100.00%		B4L7V0              	100.00%
Bootstrap support for A8JED2 as seed ortholog is 100%.
Bootstrap support for B4L7V0 as seed ortholog is 100%.

Group of orthologs #1212. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 D.mojavensis:149

A8JGC0              	100.00%		B4L8E8              	100.00%
Bootstrap support for A8JGC0 as seed ortholog is 100%.
Bootstrap support for B4L8E8 as seed ortholog is 100%.

Group of orthologs #1213. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:76

A8J0A2              	100.00%		B4KL78              	100.00%
                    	       		B4L6X8              	36.72%
                    	       		B4L1Q9              	29.66%
                    	       		B4KCU6              	28.25%
                    	       		B4L3Z9              	25.14%
                    	       		B4L3J3              	24.01%
                    	       		B4L3Z8              	23.73%
                    	       		B4L4H3              	17.23%
                    	       		B4K728              	6.21%
Bootstrap support for A8J0A2 as seed ortholog is 99%.
Bootstrap support for B4KL78 as seed ortholog is 98%.

Group of orthologs #1214. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 D.mojavensis:148

A8ITU7              	100.00%		B4KDL4              	100.00%
                    	       		B4KL12              	23.02%
                    	       		B4KL14              	16.87%
                    	       		B4KL13              	11.51%
Bootstrap support for A8ITU7 as seed ortholog is 55%.
Alternative seed ortholog is A8IPI7 (7 bits away from this cluster)
Bootstrap support for B4KDL4 as seed ortholog is 100%.

Group of orthologs #1215. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:148

A8HY41              	100.00%		B4L8V2              	100.00%
                    	       		B4L440              	40.59%
                    	       		B4K616              	21.34%
Bootstrap support for A8HY41 as seed ortholog is 94%.
Bootstrap support for B4L8V2 as seed ortholog is 100%.

Group of orthologs #1216. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:80

A8JG53              	100.00%		B4KP61              	100.00%
                    	       		B4KP62              	22.14%
                    	       		B4KP63              	19.52%
Bootstrap support for A8JG53 as seed ortholog is 78%.
Bootstrap support for B4KP61 as seed ortholog is 95%.

Group of orthologs #1217. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:148

A8HZQ4              	100.00%		B4KCD4              	100.00%
A8HPG8              	26.01%		
Bootstrap support for A8HZQ4 as seed ortholog is 99%.
Bootstrap support for B4KCD4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 D.mojavensis:148

A8JFM6              	100.00%		B4KZ66              	100.00%
Bootstrap support for A8JFM6 as seed ortholog is 100%.
Bootstrap support for B4KZ66 as seed ortholog is 100%.

Group of orthologs #1219. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 D.mojavensis:147

A8IUN8              	100.00%		B4KAH4              	100.00%
Bootstrap support for A8IUN8 as seed ortholog is 100%.
Bootstrap support for B4KAH4 as seed ortholog is 100%.

Group of orthologs #1220. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 D.mojavensis:147

A8HYD2              	100.00%		B4KSR4              	100.00%
Bootstrap support for A8HYD2 as seed ortholog is 100%.
Bootstrap support for B4KSR4 as seed ortholog is 100%.

Group of orthologs #1221. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 D.mojavensis:24

A8I0G0              	100.00%		B4KVR6              	100.00%
Bootstrap support for A8I0G0 as seed ortholog is 100%.
Bootstrap support for B4KVR6 as seed ortholog is 65%.
Alternative seed ortholog is B4KCP1 (24 bits away from this cluster)

Group of orthologs #1222. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 D.mojavensis:147

A8JF79              	100.00%		B4K4X4              	100.00%
Bootstrap support for A8JF79 as seed ortholog is 100%.
Bootstrap support for B4K4X4 as seed ortholog is 100%.

Group of orthologs #1223. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 D.mojavensis:147

A8J7L7              	100.00%		B4KZ16              	100.00%
Bootstrap support for A8J7L7 as seed ortholog is 100%.
Bootstrap support for B4KZ16 as seed ortholog is 100%.

Group of orthologs #1224. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 D.mojavensis:146

A8IWN9              	100.00%		B4KD78              	100.00%
Bootstrap support for A8IWN9 as seed ortholog is 72%.
Alternative seed ortholog is A8IFX2 (28 bits away from this cluster)
Bootstrap support for B4KD78 as seed ortholog is 100%.

Group of orthologs #1225. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 D.mojavensis:146

A8IHG8              	100.00%		B4L768              	100.00%
Bootstrap support for A8IHG8 as seed ortholog is 100%.
Bootstrap support for B4L768 as seed ortholog is 100%.

Group of orthologs #1226. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 D.mojavensis:37

A8IZB3              	100.00%		B4L3C7              	100.00%
Bootstrap support for A8IZB3 as seed ortholog is 92%.
Bootstrap support for B4L3C7 as seed ortholog is 96%.

Group of orthologs #1227. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 D.mojavensis:145

A8HX36              	100.00%		B4KBJ6              	100.00%
Bootstrap support for A8HX36 as seed ortholog is 100%.
Bootstrap support for B4KBJ6 as seed ortholog is 100%.

Group of orthologs #1228. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 D.mojavensis:12

A8HXK7              	100.00%		B4L5H6              	100.00%
                    	       		B4KFC4              	29.29%
                    	       		B4KFC3              	25.73%
Bootstrap support for A8HXK7 as seed ortholog is 60%.
Alternative seed ortholog is A8HZM9 (11 bits away from this cluster)
Bootstrap support for B4L5H6 as seed ortholog is 62%.
Alternative seed ortholog is B4KDZ8 (12 bits away from this cluster)

Group of orthologs #1229. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:144

A8I550              	100.00%		B4KLV5              	100.00%
A8I554              	30.68%		
Bootstrap support for A8I550 as seed ortholog is 100%.
Bootstrap support for B4KLV5 as seed ortholog is 100%.

Group of orthologs #1230. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:144

A8ISL4              	100.00%		B4KK64              	100.00%
                    	       		B4L3B6              	8.16%
Bootstrap support for A8ISL4 as seed ortholog is 100%.
Bootstrap support for B4KK64 as seed ortholog is 100%.

Group of orthologs #1231. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:144

A8IM74              	100.00%		B4KEC0              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for B4KEC0 as seed ortholog is 100%.

Group of orthologs #1232. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:144

A8J951              	100.00%		B4KFF8              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for B4KFF8 as seed ortholog is 100%.

Group of orthologs #1233. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 D.mojavensis:144

A8J3W3              	100.00%		B4KNJ6              	100.00%
Bootstrap support for A8J3W3 as seed ortholog is 100%.
Bootstrap support for B4KNJ6 as seed ortholog is 100%.

Group of orthologs #1234. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 D.mojavensis:18

A8J9M6              	100.00%		B4L1E1              	100.00%
Bootstrap support for A8J9M6 as seed ortholog is 93%.
Bootstrap support for B4L1E1 as seed ortholog is 65%.
Alternative seed ortholog is B4KN43 (18 bits away from this cluster)

Group of orthologs #1235. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:143

A8HY72              	100.00%		B4K5P7              	100.00%
                    	       		B4L4P7              	11.63%
Bootstrap support for A8HY72 as seed ortholog is 100%.
Bootstrap support for B4K5P7 as seed ortholog is 100%.

Group of orthologs #1236. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:143

A8IR87              	100.00%		B4L9I2              	100.00%
                    	       		B4KX71              	30.16%
Bootstrap support for A8IR87 as seed ortholog is 100%.
Bootstrap support for B4L9I2 as seed ortholog is 100%.

Group of orthologs #1237. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:27

A8HZZ8              	100.00%		B4K881              	100.00%
Bootstrap support for A8HZZ8 as seed ortholog is 100%.
Bootstrap support for B4K881 as seed ortholog is 76%.

Group of orthologs #1238. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 D.mojavensis:143

A8IBC1              	100.00%		B4KIA1              	100.00%
Bootstrap support for A8IBC1 as seed ortholog is 100%.
Bootstrap support for B4KIA1 as seed ortholog is 100%.

Group of orthologs #1239. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 D.mojavensis:143

A8JGY1              	100.00%		B4KSX6              	100.00%
Bootstrap support for A8JGY1 as seed ortholog is 91%.
Bootstrap support for B4KSX6 as seed ortholog is 100%.

Group of orthologs #1240. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 D.mojavensis:142

A8HMZ3              	100.00%		B4KTP9              	100.00%
A8J3Y2              	5.62%		
Bootstrap support for A8HMZ3 as seed ortholog is 84%.
Bootstrap support for B4KTP9 as seed ortholog is 100%.

Group of orthologs #1241. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 D.mojavensis:142

A8IWW7              	100.00%		B4L982              	100.00%
O22448              	11.45%		
Bootstrap support for A8IWW7 as seed ortholog is 84%.
Bootstrap support for B4L982 as seed ortholog is 100%.

Group of orthologs #1242. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:142

A8HN56              	100.00%		B4K7S4              	100.00%
Bootstrap support for A8HN56 as seed ortholog is 100%.
Bootstrap support for B4K7S4 as seed ortholog is 100%.

Group of orthologs #1243. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:142

A8I3S8              	100.00%		B4KJ13              	100.00%
Bootstrap support for A8I3S8 as seed ortholog is 100%.
Bootstrap support for B4KJ13 as seed ortholog is 100%.

Group of orthologs #1244. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:142

A8IMK5              	100.00%		B4KCQ8              	100.00%
Bootstrap support for A8IMK5 as seed ortholog is 100%.
Bootstrap support for B4KCQ8 as seed ortholog is 100%.

Group of orthologs #1245. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:142

A8JCP2              	100.00%		B4KDK8              	100.00%
Bootstrap support for A8JCP2 as seed ortholog is 93%.
Bootstrap support for B4KDK8 as seed ortholog is 100%.

Group of orthologs #1246. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:142

A8I7C2              	100.00%		B4L5P6              	100.00%
Bootstrap support for A8I7C2 as seed ortholog is 100%.
Bootstrap support for B4L5P6 as seed ortholog is 100%.

Group of orthologs #1247. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 D.mojavensis:39

A8J2J5              	100.00%		B4L7Q0              	100.00%
Bootstrap support for A8J2J5 as seed ortholog is 100%.
Bootstrap support for B4L7Q0 as seed ortholog is 86%.

Group of orthologs #1248. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:58

A8J3F8              	100.00%		B4K4Z9              	100.00%
Bootstrap support for A8J3F8 as seed ortholog is 100%.
Bootstrap support for B4K4Z9 as seed ortholog is 99%.

Group of orthologs #1249. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 D.mojavensis:141

O64980              	100.00%		B4K943              	100.00%
Bootstrap support for O64980 as seed ortholog is 96%.
Bootstrap support for B4K943 as seed ortholog is 100%.

Group of orthologs #1250. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:141

A8JG70              	100.00%		B4KRS0              	100.00%
Bootstrap support for A8JG70 as seed ortholog is 100%.
Bootstrap support for B4KRS0 as seed ortholog is 100%.

Group of orthologs #1251. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:141

A8JDK0              	100.00%		B4KVI1              	100.00%
Bootstrap support for A8JDK0 as seed ortholog is 100%.
Bootstrap support for B4KVI1 as seed ortholog is 100%.

Group of orthologs #1252. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 D.mojavensis:141

A8JG85              	100.00%		B4L9S3              	100.00%
Bootstrap support for A8JG85 as seed ortholog is 100%.
Bootstrap support for B4L9S3 as seed ortholog is 100%.

Group of orthologs #1253. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 D.mojavensis:98

A8J206              	100.00%		B4KHW2              	100.00%
                    	       		B4LAM1              	94.47%
Bootstrap support for A8J206 as seed ortholog is 100%.
Bootstrap support for B4KHW2 as seed ortholog is 100%.

Group of orthologs #1254. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 D.mojavensis:33

A8IWK6              	100.00%		B4KUL7              	100.00%
A8J822              	24.45%		
Bootstrap support for A8IWK6 as seed ortholog is 87%.
Bootstrap support for B4KUL7 as seed ortholog is 82%.

Group of orthologs #1255. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 D.mojavensis:140

A8HZM0              	100.00%		B4KWF5              	100.00%
Bootstrap support for A8HZM0 as seed ortholog is 98%.
Bootstrap support for B4KWF5 as seed ortholog is 100%.

Group of orthologs #1256. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 D.mojavensis:140

A8ICQ5              	100.00%		B4KYE1              	100.00%
Bootstrap support for A8ICQ5 as seed ortholog is 100%.
Bootstrap support for B4KYE1 as seed ortholog is 100%.

Group of orthologs #1257. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 D.mojavensis:140

A8HWY9              	100.00%		B4L4T2              	100.00%
Bootstrap support for A8HWY9 as seed ortholog is 100%.
Bootstrap support for B4L4T2 as seed ortholog is 100%.

Group of orthologs #1258. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:140

A8JF84              	100.00%		B4L0P4              	100.00%
Bootstrap support for A8JF84 as seed ortholog is 100%.
Bootstrap support for B4L0P4 as seed ortholog is 100%.

Group of orthologs #1259. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:56

A8I3B9              	100.00%		B4KJM3              	100.00%
A8INQ3              	19.61%		
A8IF89              	13.62%		
A8HMT9              	12.13%		
A8HQ35              	10.33%		
A8HQ26              	9.88%		
A8I1C2              	8.08%		
A8J9A2              	7.63%		
A8I372              	7.34%		
A8JAC3              	7.34%		
A8J1N0              	6.89%		
A8J7F3              	5.99%		
A8JAU8              	5.09%		
Bootstrap support for A8I3B9 as seed ortholog is 100%.
Bootstrap support for B4KJM3 as seed ortholog is 94%.

Group of orthologs #1260. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8IEM7              	100.00%		B4KXZ5              	100.00%
A8I718              	18.21%		
Bootstrap support for A8IEM7 as seed ortholog is 100%.
Bootstrap support for B4KXZ5 as seed ortholog is 100%.

Group of orthologs #1261. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:139

A8J942              	100.00%		B4KPD4              	100.00%
A8JA41              	25.28%		
Bootstrap support for A8J942 as seed ortholog is 96%.
Bootstrap support for B4KPD4 as seed ortholog is 100%.

Group of orthologs #1262. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8JCJ0              	100.00%		B4L1N7              	100.00%
A8IMH9              	10.25%		
Bootstrap support for A8JCJ0 as seed ortholog is 100%.
Bootstrap support for B4L1N7 as seed ortholog is 100%.

Group of orthologs #1263. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:82

A8IE61              	100.00%		B4K946              	100.00%
Bootstrap support for A8IE61 as seed ortholog is 100%.
Bootstrap support for B4K946 as seed ortholog is 99%.

Group of orthologs #1264. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8IV35              	100.00%		B4K7U7              	100.00%
Bootstrap support for A8IV35 as seed ortholog is 100%.
Bootstrap support for B4K7U7 as seed ortholog is 100%.

Group of orthologs #1265. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8HVN9              	100.00%		B4KLJ4              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 100%.
Bootstrap support for B4KLJ4 as seed ortholog is 100%.

Group of orthologs #1266. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 D.mojavensis:139

A8J746              	100.00%		B4K5N5              	100.00%
Bootstrap support for A8J746 as seed ortholog is 53%.
Alternative seed ortholog is A8J740 (1 bits away from this cluster)
Bootstrap support for B4K5N5 as seed ortholog is 100%.

Group of orthologs #1267. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 D.mojavensis:90

A8I9M5              	100.00%		B4L0D0              	100.00%
Bootstrap support for A8I9M5 as seed ortholog is 67%.
Alternative seed ortholog is A8JEQ5 (27 bits away from this cluster)
Bootstrap support for B4L0D0 as seed ortholog is 98%.

Group of orthologs #1268. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8JCI4              	100.00%		B4KIX0              	100.00%
Bootstrap support for A8JCI4 as seed ortholog is 100%.
Bootstrap support for B4KIX0 as seed ortholog is 100%.

Group of orthologs #1269. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8J246              	100.00%		B4KW88              	100.00%
Bootstrap support for A8J246 as seed ortholog is 100%.
Bootstrap support for B4KW88 as seed ortholog is 100%.

Group of orthologs #1270. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:139

A8J438              	100.00%		B4L6Z7              	100.00%
Bootstrap support for A8J438 as seed ortholog is 100%.
Bootstrap support for B4L6Z7 as seed ortholog is 100%.

Group of orthologs #1271. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 D.mojavensis:24

A8JHR1              	100.00%		B4KX22              	100.00%
Bootstrap support for A8JHR1 as seed ortholog is 100%.
Bootstrap support for B4KX22 as seed ortholog is 86%.

Group of orthologs #1272. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:0 D.mojavensis:19

A8IA26              	100.00%		B4KKU0              	100.00%
A8IA23              	21.49%		
A8JFM9              	18.91%		
Q9ZSM9              	15.62%		
A8J6Z7              	15.47%		
A8JBV3              	14.61%		
A8I1Q9              	10.74%		
A8J777              	7.45%		
Bootstrap support for A8IA26 as seed ortholog is 49%.
Alternative seed ortholog is A8HYQ4 (0 bits away from this cluster)
Bootstrap support for B4KKU0 as seed ortholog is 67%.
Alternative seed ortholog is B4KEP1 (19 bits away from this cluster)

Group of orthologs #1273. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:52

A8IXR5              	100.00%		B4L3U7              	100.00%
                    	       		B4KW75              	21.65%
                    	       		B4KUN7              	20.08%
Bootstrap support for A8IXR5 as seed ortholog is 100%.
Bootstrap support for B4L3U7 as seed ortholog is 97%.

Group of orthologs #1274. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:138

A8IGC6              	100.00%		B4K948              	100.00%
Bootstrap support for A8IGC6 as seed ortholog is 100%.
Bootstrap support for B4K948 as seed ortholog is 100%.

Group of orthologs #1275. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:138

A8IUR4              	100.00%		B4K5Q5              	100.00%
Bootstrap support for A8IUR4 as seed ortholog is 100%.
Bootstrap support for B4K5Q5 as seed ortholog is 100%.

Group of orthologs #1276. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:138

A8I0E2              	100.00%		B4KMN1              	100.00%
Bootstrap support for A8I0E2 as seed ortholog is 100%.
Bootstrap support for B4KMN1 as seed ortholog is 100%.

Group of orthologs #1277. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:138

A8IRW3              	100.00%		B4KJ12              	100.00%
Bootstrap support for A8IRW3 as seed ortholog is 100%.
Bootstrap support for B4KJ12 as seed ortholog is 100%.

Group of orthologs #1278. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 D.mojavensis:138

A8HPX6              	100.00%		B4L6Y4              	100.00%
Bootstrap support for A8HPX6 as seed ortholog is 89%.
Bootstrap support for B4L6Y4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:138

A8IBG1              	100.00%		B4L5B0              	100.00%
Bootstrap support for A8IBG1 as seed ortholog is 100%.
Bootstrap support for B4L5B0 as seed ortholog is 100%.

Group of orthologs #1280. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:66

A8JFV0              	100.00%		B4KJW8              	100.00%
Bootstrap support for A8JFV0 as seed ortholog is 95%.
Bootstrap support for B4KJW8 as seed ortholog is 94%.

Group of orthologs #1281. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 D.mojavensis:138

A8ITP7              	100.00%		B4L9B0              	100.00%
Bootstrap support for A8ITP7 as seed ortholog is 100%.
Bootstrap support for B4L9B0 as seed ortholog is 100%.

Group of orthologs #1282. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:137

Q6UPR0              	100.00%		B4L5U1              	100.00%
                    	       		B4KMJ1              	7.89%
Bootstrap support for Q6UPR0 as seed ortholog is 100%.
Bootstrap support for B4L5U1 as seed ortholog is 100%.

Group of orthologs #1283. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:137

A8IXY0              	100.00%		B4K9F1              	100.00%
Bootstrap support for A8IXY0 as seed ortholog is 100%.
Bootstrap support for B4K9F1 as seed ortholog is 100%.

Group of orthologs #1284. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:137

A8I4L4              	100.00%		B4KUW6              	100.00%
Bootstrap support for A8I4L4 as seed ortholog is 100%.
Bootstrap support for B4KUW6 as seed ortholog is 100%.

Group of orthologs #1285. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 D.mojavensis:137

A8IPS8              	100.00%		B4KWW4              	100.00%
Bootstrap support for A8IPS8 as seed ortholog is 100%.
Bootstrap support for B4KWW4 as seed ortholog is 100%.

Group of orthologs #1286. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 D.mojavensis:136

A8IR48              	100.00%		B4L4W6              	100.00%
A8JCT8              	13.05%		
A8JCK8              	10.48%		
A8IQ80              	9.97%		
A8JBW2              	7.75%		
Bootstrap support for A8IR48 as seed ortholog is 84%.
Bootstrap support for B4L4W6 as seed ortholog is 100%.

Group of orthologs #1287. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 D.mojavensis:35

A8IBU6              	100.00%		B4KA59              	100.00%
                    	       		B4K8E0              	9.61%
                    	       		B4KA56              	7.72%
Bootstrap support for A8IBU6 as seed ortholog is 65%.
Alternative seed ortholog is A8IZS5 (24 bits away from this cluster)
Bootstrap support for B4KA59 as seed ortholog is 70%.
Alternative seed ortholog is B4KJW4 (35 bits away from this cluster)

Group of orthologs #1288. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8J8M8              	100.00%		B4K6U2              	100.00%
A8J8M6              	17.98%		
Bootstrap support for A8J8M8 as seed ortholog is 100%.
Bootstrap support for B4K6U2 as seed ortholog is 100%.

Group of orthologs #1289. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8J801              	100.00%		B4K8A3              	100.00%
                    	       		B4KSZ7              	34.42%
Bootstrap support for A8J801 as seed ortholog is 100%.
Bootstrap support for B4K8A3 as seed ortholog is 100%.

Group of orthologs #1290. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8JF70              	100.00%		B4L125              	100.00%
                    	       		B4KAW0              	5.46%
Bootstrap support for A8JF70 as seed ortholog is 100%.
Bootstrap support for B4L125 as seed ortholog is 100%.

Group of orthologs #1291. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8IQC1              	100.00%		B4K4V4              	100.00%
Bootstrap support for A8IQC1 as seed ortholog is 100%.
Bootstrap support for B4K4V4 as seed ortholog is 100%.

Group of orthologs #1292. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8ITP1              	100.00%		B4K6Z7              	100.00%
Bootstrap support for A8ITP1 as seed ortholog is 100%.
Bootstrap support for B4K6Z7 as seed ortholog is 100%.

Group of orthologs #1293. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8JFA0              	100.00%		B4K5D1              	100.00%
Bootstrap support for A8JFA0 as seed ortholog is 100%.
Bootstrap support for B4K5D1 as seed ortholog is 100%.

Group of orthologs #1294. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8J3X5              	100.00%		B4KJ17              	100.00%
Bootstrap support for A8J3X5 as seed ortholog is 100%.
Bootstrap support for B4KJ17 as seed ortholog is 100%.

Group of orthologs #1295. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8HZP7              	100.00%		B4L6M4              	100.00%
Bootstrap support for A8HZP7 as seed ortholog is 100%.
Bootstrap support for B4L6M4 as seed ortholog is 100%.

Group of orthologs #1296. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:69

A8JHR3              	100.00%		B4KBE9              	100.00%
Bootstrap support for A8JHR3 as seed ortholog is 97%.
Bootstrap support for B4KBE9 as seed ortholog is 97%.

Group of orthologs #1297. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:136

A8IQI9              	100.00%		B4L620              	100.00%
Bootstrap support for A8IQI9 as seed ortholog is 72%.
Alternative seed ortholog is A8HWI9 (3 bits away from this cluster)
Bootstrap support for B4L620 as seed ortholog is 100%.

Group of orthologs #1298. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8J499              	100.00%		B4KW24              	100.00%
Bootstrap support for A8J499 as seed ortholog is 100%.
Bootstrap support for B4KW24 as seed ortholog is 100%.

Group of orthologs #1299. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 D.mojavensis:136

A8JD65              	100.00%		B4KVC6              	100.00%
Bootstrap support for A8JD65 as seed ortholog is 100%.
Bootstrap support for B4KVC6 as seed ortholog is 100%.

Group of orthologs #1300. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:4

A8JA95              	100.00%		B4L8T1              	100.00%
Bootstrap support for A8JA95 as seed ortholog is 51%.
Alternative seed ortholog is A8JI17 (3 bits away from this cluster)
Bootstrap support for B4L8T1 as seed ortholog is 45%.
Alternative seed ortholog is B4KBA6 (4 bits away from this cluster)

Group of orthologs #1301. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:57

A8IVV6              	100.00%		B4K6K5              	100.00%
A8J691              	7.63%		
Bootstrap support for A8IVV6 as seed ortholog is 91%.
Bootstrap support for B4K6K5 as seed ortholog is 92%.

Group of orthologs #1302. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 D.mojavensis:135

A8IMS6              	100.00%		B4K5V5              	100.00%
Bootstrap support for A8IMS6 as seed ortholog is 100%.
Bootstrap support for B4K5V5 as seed ortholog is 100%.

Group of orthologs #1303. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 D.mojavensis:135

A8HY08              	100.00%		B4KGT1              	100.00%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for B4KGT1 as seed ortholog is 100%.

Group of orthologs #1304. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:76

A8IAI7              	100.00%		B4KIB0              	100.00%
Bootstrap support for A8IAI7 as seed ortholog is 100%.
Bootstrap support for B4KIB0 as seed ortholog is 100%.

Group of orthologs #1305. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:30

A8ITU6              	100.00%		B4KHA6              	100.00%
A8ITU2              	91.82%		
Bootstrap support for A8ITU6 as seed ortholog is 53%.
Alternative seed ortholog is A8HPR9 (3 bits away from this cluster)
Bootstrap support for B4KHA6 as seed ortholog is 82%.

Group of orthologs #1306. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 D.mojavensis:134

A8IY93              	100.00%		B4K580              	100.00%
Bootstrap support for A8IY93 as seed ortholog is 100%.
Bootstrap support for B4K580 as seed ortholog is 100%.

Group of orthologs #1307. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 D.mojavensis:134

A8J6E1              	100.00%		B4K4W1              	100.00%
Bootstrap support for A8J6E1 as seed ortholog is 81%.
Bootstrap support for B4K4W1 as seed ortholog is 100%.

Group of orthologs #1308. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 D.mojavensis:134

A8J097              	100.00%		B4KNC3              	100.00%
Bootstrap support for A8J097 as seed ortholog is 100%.
Bootstrap support for B4KNC3 as seed ortholog is 100%.

Group of orthologs #1309. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 D.mojavensis:134

A8IWT0              	100.00%		B4KT66              	100.00%
Bootstrap support for A8IWT0 as seed ortholog is 100%.
Bootstrap support for B4KT66 as seed ortholog is 100%.

Group of orthologs #1310. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 D.mojavensis:134

A8JGI1              	100.00%		B4KKE0              	100.00%
Bootstrap support for A8JGI1 as seed ortholog is 100%.
Bootstrap support for B4KKE0 as seed ortholog is 100%.

Group of orthologs #1311. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 D.mojavensis:35

Q8S3U7              	100.00%		B4L0U4              	100.00%
Bootstrap support for Q8S3U7 as seed ortholog is 85%.
Bootstrap support for B4L0U4 as seed ortholog is 82%.

Group of orthologs #1312. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:133

A8HW92              	100.00%		B4L710              	100.00%
                    	       		B4K7S5              	55.85%
Bootstrap support for A8HW92 as seed ortholog is 100%.
Bootstrap support for B4L710 as seed ortholog is 100%.

Group of orthologs #1313. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:133

A8IHQ2              	100.00%		B4KES4              	100.00%
Bootstrap support for A8IHQ2 as seed ortholog is 100%.
Bootstrap support for B4KES4 as seed ortholog is 100%.

Group of orthologs #1314. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:133

A8IVF0              	100.00%		B4KBR8              	100.00%
Bootstrap support for A8IVF0 as seed ortholog is 100%.
Bootstrap support for B4KBR8 as seed ortholog is 100%.

Group of orthologs #1315. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:133

A8HPP9              	100.00%		B4L0J4              	100.00%
Bootstrap support for A8HPP9 as seed ortholog is 100%.
Bootstrap support for B4L0J4 as seed ortholog is 100%.

Group of orthologs #1316. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:78

A8HQC1              	100.00%		B4L149              	100.00%
Bootstrap support for A8HQC1 as seed ortholog is 100%.
Bootstrap support for B4L149 as seed ortholog is 98%.

Group of orthologs #1317. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:133

A8INM9              	100.00%		B4KQA4              	100.00%
Bootstrap support for A8INM9 as seed ortholog is 100%.
Bootstrap support for B4KQA4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 D.mojavensis:17

A8HMH1              	100.00%		B4L9R9              	100.00%
Bootstrap support for A8HMH1 as seed ortholog is 100%.
Bootstrap support for B4L9R9 as seed ortholog is 56%.
Alternative seed ortholog is B4K536 (17 bits away from this cluster)

Group of orthologs #1319. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:34

A8IL73              	100.00%		B4KXM7              	100.00%
Bootstrap support for A8IL73 as seed ortholog is 96%.
Bootstrap support for B4KXM7 as seed ortholog is 80%.

Group of orthologs #1320. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:87

A8J5G1              	100.00%		B4KQJ1              	100.00%
Bootstrap support for A8J5G1 as seed ortholog is 99%.
Bootstrap support for B4KQJ1 as seed ortholog is 99%.

Group of orthologs #1321. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:132

A8J3Q5              	100.00%		B4KIW8              	100.00%
Bootstrap support for A8J3Q5 as seed ortholog is 54%.
Alternative seed ortholog is A8ITZ0 (3 bits away from this cluster)
Bootstrap support for B4KIW8 as seed ortholog is 100%.

Group of orthologs #1322. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:132

A8IIA2              	100.00%		B4L066              	100.00%
Bootstrap support for A8IIA2 as seed ortholog is 100%.
Bootstrap support for B4L066 as seed ortholog is 100%.

Group of orthologs #1323. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 D.mojavensis:132

A8JCP0              	100.00%		B4KTF4              	100.00%
Bootstrap support for A8JCP0 as seed ortholog is 100%.
Bootstrap support for B4KTF4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 D.mojavensis:132

A8IZM3              	100.00%		B4L7Q1              	100.00%
Bootstrap support for A8IZM3 as seed ortholog is 100%.
Bootstrap support for B4L7Q1 as seed ortholog is 100%.

Group of orthologs #1325. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:131

A8IWV9              	100.00%		B4K8K3              	100.00%
                    	       		B4K8K6              	44.82%
Bootstrap support for A8IWV9 as seed ortholog is 100%.
Bootstrap support for B4K8K3 as seed ortholog is 100%.

Group of orthologs #1326. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:131

A8IQU0              	100.00%		B4KUC6              	100.00%
                    	       		B4L6W0              	30.13%
Bootstrap support for A8IQU0 as seed ortholog is 99%.
Bootstrap support for B4KUC6 as seed ortholog is 100%.

Group of orthologs #1327. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:15

A8ICX5              	100.00%		B4KEN7              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for B4KEN7 as seed ortholog is 67%.
Alternative seed ortholog is B4KGY1 (15 bits away from this cluster)

Group of orthologs #1328. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:131

A8I4R4              	100.00%		B4KRG5              	100.00%
Bootstrap support for A8I4R4 as seed ortholog is 100%.
Bootstrap support for B4KRG5 as seed ortholog is 100%.

Group of orthologs #1329. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:131

A8HNA4              	100.00%		B4L6K7              	100.00%
Bootstrap support for A8HNA4 as seed ortholog is 100%.
Bootstrap support for B4L6K7 as seed ortholog is 100%.

Group of orthologs #1330. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:131

A8IWS4              	100.00%		B4KT13              	100.00%
Bootstrap support for A8IWS4 as seed ortholog is 100%.
Bootstrap support for B4KT13 as seed ortholog is 100%.

Group of orthologs #1331. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:131

A8J3R6              	100.00%		B4KMT7              	100.00%
Bootstrap support for A8J3R6 as seed ortholog is 100%.
Bootstrap support for B4KMT7 as seed ortholog is 100%.

Group of orthologs #1332. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 D.mojavensis:131

A8I403              	100.00%		B4L7Y6              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for B4L7Y6 as seed ortholog is 100%.

Group of orthologs #1333. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 D.mojavensis:130

A8JJR9              	100.00%		B4KFB1              	100.00%
A8HQF3              	82.39%		
Bootstrap support for A8JJR9 as seed ortholog is 100%.
Bootstrap support for B4KFB1 as seed ortholog is 100%.

Group of orthologs #1334. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 D.mojavensis:130

A8HP70              	100.00%		B4KA46              	100.00%
Bootstrap support for A8HP70 as seed ortholog is 68%.
Alternative seed ortholog is A8J3K9 (14 bits away from this cluster)
Bootstrap support for B4KA46 as seed ortholog is 100%.

Group of orthologs #1335. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 D.mojavensis:130

A8IXQ9              	100.00%		B4KGA1              	100.00%
Bootstrap support for A8IXQ9 as seed ortholog is 100%.
Bootstrap support for B4KGA1 as seed ortholog is 100%.

Group of orthologs #1336. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 D.mojavensis:32

A8IG95              	100.00%		B4L072              	100.00%
Bootstrap support for A8IG95 as seed ortholog is 100%.
Bootstrap support for B4L072 as seed ortholog is 78%.

Group of orthologs #1337. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:129

A8I8X2              	100.00%		B4K835              	100.00%
A8HQB3              	12.24%		
Bootstrap support for A8I8X2 as seed ortholog is 90%.
Bootstrap support for B4K835 as seed ortholog is 100%.

Group of orthologs #1338. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:13

A8I0Q7              	100.00%		B4KBV3              	100.00%
Bootstrap support for A8I0Q7 as seed ortholog is 100%.
Bootstrap support for B4KBV3 as seed ortholog is 68%.
Alternative seed ortholog is B4L929 (13 bits away from this cluster)

Group of orthologs #1339. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:129

A8J213              	100.00%		B4K8L7              	100.00%
Bootstrap support for A8J213 as seed ortholog is 100%.
Bootstrap support for B4K8L7 as seed ortholog is 100%.

Group of orthologs #1340. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:129

A8J1G4              	100.00%		B4KKN9              	100.00%
Bootstrap support for A8J1G4 as seed ortholog is 100%.
Bootstrap support for B4KKN9 as seed ortholog is 100%.

Group of orthologs #1341. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:129

A8J2W3              	100.00%		B4KNN6              	100.00%
Bootstrap support for A8J2W3 as seed ortholog is 100%.
Bootstrap support for B4KNN6 as seed ortholog is 100%.

Group of orthologs #1342. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:60

A8JCT0              	100.00%		B4KZV6              	100.00%
Bootstrap support for A8JCT0 as seed ortholog is 100%.
Bootstrap support for B4KZV6 as seed ortholog is 98%.

Group of orthologs #1343. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 D.mojavensis:58

Q8LRU1              	100.00%		B4L624              	100.00%
Bootstrap support for Q8LRU1 as seed ortholog is 100%.
Bootstrap support for B4L624 as seed ortholog is 98%.

Group of orthologs #1344. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:128

A8HP90              	100.00%		B4K7Y7              	100.00%
Bootstrap support for A8HP90 as seed ortholog is 100%.
Bootstrap support for B4K7Y7 as seed ortholog is 100%.

Group of orthologs #1345. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:67

A8HUY7              	100.00%		B4K7D2              	100.00%
Bootstrap support for A8HUY7 as seed ortholog is 100%.
Bootstrap support for B4K7D2 as seed ortholog is 98%.

Group of orthologs #1346. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 D.mojavensis:128

A8HVG5              	100.00%		B4KNW5              	100.00%
Bootstrap support for A8HVG5 as seed ortholog is 100%.
Bootstrap support for B4KNW5 as seed ortholog is 100%.

Group of orthologs #1347. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:128

A8I8E3              	100.00%		B4KME9              	100.00%
Bootstrap support for A8I8E3 as seed ortholog is 100%.
Bootstrap support for B4KME9 as seed ortholog is 100%.

Group of orthologs #1348. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:128

A8ITT0              	100.00%		B4KMN9              	100.00%
Bootstrap support for A8ITT0 as seed ortholog is 100%.
Bootstrap support for B4KMN9 as seed ortholog is 100%.

Group of orthologs #1349. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:128

A8J6G4              	100.00%		B4KED4              	100.00%
Bootstrap support for A8J6G4 as seed ortholog is 100%.
Bootstrap support for B4KED4 as seed ortholog is 100%.

Group of orthologs #1350. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:128

A8J237              	100.00%		B4KQL4              	100.00%
Bootstrap support for A8J237 as seed ortholog is 100%.
Bootstrap support for B4KQL4 as seed ortholog is 100%.

Group of orthologs #1351. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 D.mojavensis:61

A8JGQ3              	100.00%		B4KRY5              	100.00%
Bootstrap support for A8JGQ3 as seed ortholog is 100%.
Bootstrap support for B4KRY5 as seed ortholog is 93%.

Group of orthologs #1352. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 D.mojavensis:127

A8JIG9              	100.00%		B4KP44              	100.00%
                    	       		B4LAF4              	97.88%
                    	       		B4LAF3              	95.99%
                    	       		B4KP43              	85.08%
                    	       		B4LAF5              	57.57%
                    	       		B4KNH1              	52.12%
                    	       		B4KNH0              	52.00%
                    	       		B4KNH2              	50.45%
                    	       		B4KP42              	21.94%
                    	       		B4KTL3              	17.82%
                    	       		B4KTL4              	17.71%
                    	       		B4KP79              	17.37%
                    	       		B4K6Z1              	17.26%
                    	       		B4K6W6              	15.03%
                    	       		B4KU20              	13.25%
                    	       		B4L358              	13.03%
                    	       		B4KTL5              	9.13%
                    	       		B4KNF5              	7.68%
                    	       		B4KC67              	7.13%
                    	       		B4L248              	6.79%
                    	       		B4KGY6              	6.24%
Bootstrap support for A8JIG9 as seed ortholog is 76%.
Bootstrap support for B4KP44 as seed ortholog is 100%.

Group of orthologs #1353. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 D.mojavensis:51

A8J3U1              	100.00%		B4KQK2              	100.00%
                    	       		B4KB28              	33.33%
                    	       		B4KB27              	32.72%
                    	       		B4KLQ8              	28.42%
                    	       		B4KU14              	16.74%
                    	       		B4KU17              	15.98%
                    	       		B4KQK1              	15.36%
                    	       		B4KB26              	14.90%
                    	       		B4KU16              	11.83%
                    	       		B4KPZ0              	5.99%
Bootstrap support for A8J3U1 as seed ortholog is 100%.
Bootstrap support for B4KQK2 as seed ortholog is 85%.

Group of orthologs #1354. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:39

A8IY22              	100.00%		B4KJ86              	100.00%
                    	       		B4L6T2              	21.46%
                    	       		B4L8Y2              	16.44%
                    	       		B4KMP2              	14.16%
Bootstrap support for A8IY22 as seed ortholog is 98%.
Bootstrap support for B4KJ86 as seed ortholog is 92%.

Group of orthologs #1355. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 D.mojavensis:127

A8J8Y2              	100.00%		B4KES5              	100.00%
A8ISC5              	5.63%		
Bootstrap support for A8J8Y2 as seed ortholog is 100%.
Bootstrap support for B4KES5 as seed ortholog is 100%.

Group of orthologs #1356. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 D.mojavensis:85

A8HM72              	100.00%		B4KLD2              	100.00%
Bootstrap support for A8HM72 as seed ortholog is 100%.
Bootstrap support for B4KLD2 as seed ortholog is 99%.

Group of orthologs #1357. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 D.mojavensis:127

A8J6G9              	100.00%		B4K8N8              	100.00%
Bootstrap support for A8J6G9 as seed ortholog is 76%.
Bootstrap support for B4K8N8 as seed ortholog is 100%.

Group of orthologs #1358. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 D.mojavensis:127

A8HTH0              	100.00%		B4KZJ4              	100.00%
Bootstrap support for A8HTH0 as seed ortholog is 100%.
Bootstrap support for B4KZJ4 as seed ortholog is 100%.

Group of orthologs #1359. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 D.mojavensis:127

A8J834              	100.00%		B4KTL2              	100.00%
Bootstrap support for A8J834 as seed ortholog is 100%.
Bootstrap support for B4KTL2 as seed ortholog is 100%.

Group of orthologs #1360. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 D.mojavensis:26

A8JH05              	100.00%		B4L6R1              	100.00%
Bootstrap support for A8JH05 as seed ortholog is 95%.
Bootstrap support for B4L6R1 as seed ortholog is 96%.

Group of orthologs #1361. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 D.mojavensis:126

A8JGH0              	100.00%		B4KNX3              	100.00%
A8JGH3              	35.61%		
A8J1F3              	23.76%		
A8JGH2              	23.68%		
A8JGH4              	23.48%		
Bootstrap support for A8JGH0 as seed ortholog is 70%.
Alternative seed ortholog is A8JCC3 (42 bits away from this cluster)
Bootstrap support for B4KNX3 as seed ortholog is 100%.

Group of orthologs #1362. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:126

A8IZ36              	100.00%		B4KDL1              	100.00%
Bootstrap support for A8IZ36 as seed ortholog is 100%.
Bootstrap support for B4KDL1 as seed ortholog is 100%.

Group of orthologs #1363. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:126

A8IS22              	100.00%		B4KK38              	100.00%
Bootstrap support for A8IS22 as seed ortholog is 100%.
Bootstrap support for B4KK38 as seed ortholog is 100%.

Group of orthologs #1364. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:126

A8J2P8              	100.00%		B4KI55              	100.00%
Bootstrap support for A8J2P8 as seed ortholog is 100%.
Bootstrap support for B4KI55 as seed ortholog is 100%.

Group of orthologs #1365. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:126

A8HNX3              	100.00%		B4L641              	100.00%
Bootstrap support for A8HNX3 as seed ortholog is 100%.
Bootstrap support for B4L641 as seed ortholog is 100%.

Group of orthologs #1366. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 D.mojavensis:126

A8JCG8              	100.00%		B4KWA1              	100.00%
Bootstrap support for A8JCG8 as seed ortholog is 100%.
Bootstrap support for B4KWA1 as seed ortholog is 100%.

Group of orthologs #1367. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 D.mojavensis:14

A8JD57              	100.00%		B4L3V7              	100.00%
A8IA03              	11.18%		
A8IIZ5              	9.63%		
A8ITH5              	6.74%		
Bootstrap support for A8JD57 as seed ortholog is 44%.
Alternative seed ortholog is A8HYQ4 (4 bits away from this cluster)
Bootstrap support for B4L3V7 as seed ortholog is 66%.
Alternative seed ortholog is B4KEP1 (14 bits away from this cluster)

Group of orthologs #1368. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 D.mojavensis:125

A8IP53              	100.00%		B4KXS7              	100.00%
                    	       		B4KEF8              	91.26%
Bootstrap support for A8IP53 as seed ortholog is 100%.
Bootstrap support for B4KXS7 as seed ortholog is 100%.

Group of orthologs #1369. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 D.mojavensis:125

A8J6M2              	100.00%		B4KNG5              	100.00%
Bootstrap support for A8J6M2 as seed ortholog is 100%.
Bootstrap support for B4KNG5 as seed ortholog is 100%.

Group of orthologs #1370. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 D.mojavensis:125

A8IHY4              	100.00%		B4L5G9              	100.00%
Bootstrap support for A8IHY4 as seed ortholog is 100%.
Bootstrap support for B4L5G9 as seed ortholog is 100%.

Group of orthologs #1371. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 D.mojavensis:125

A8IUM9              	100.00%		B4L6U5              	100.00%
Bootstrap support for A8IUM9 as seed ortholog is 100%.
Bootstrap support for B4L6U5 as seed ortholog is 100%.

Group of orthologs #1372. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8IWR1              	100.00%		B4KGE3              	100.00%
Bootstrap support for A8IWR1 as seed ortholog is 100%.
Bootstrap support for B4KGE3 as seed ortholog is 100%.

Group of orthologs #1373. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8JE98              	100.00%		B4K646              	100.00%
Bootstrap support for A8JE98 as seed ortholog is 100%.
Bootstrap support for B4K646 as seed ortholog is 100%.

Group of orthologs #1374. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8ILG8              	100.00%		B4KTW2              	100.00%
Bootstrap support for A8ILG8 as seed ortholog is 100%.
Bootstrap support for B4KTW2 as seed ortholog is 100%.

Group of orthologs #1375. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8I3Q0              	100.00%		B4L9R8              	100.00%
Bootstrap support for A8I3Q0 as seed ortholog is 100%.
Bootstrap support for B4L9R8 as seed ortholog is 100%.

Group of orthologs #1376. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8IR25              	100.00%		B4L593              	100.00%
Bootstrap support for A8IR25 as seed ortholog is 100%.
Bootstrap support for B4L593 as seed ortholog is 100%.

Group of orthologs #1377. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8J2U3              	100.00%		B4L394              	100.00%
Bootstrap support for A8J2U3 as seed ortholog is 100%.
Bootstrap support for B4L394 as seed ortholog is 100%.

Group of orthologs #1378. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 D.mojavensis:124

A8J6Q2              	100.00%		B4L5F1              	100.00%
Bootstrap support for A8J6Q2 as seed ortholog is 100%.
Bootstrap support for B4L5F1 as seed ortholog is 100%.

Group of orthologs #1379. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:123

A8J015              	100.00%		B4K744              	100.00%
A8JEN2              	30.97%		B4K742              	63.60%
                    	       		B4KA75              	36.70%
                    	       		B4K9T1              	32.46%
                    	       		B4K9T3              	31.73%
                    	       		B4K9T2              	6.29%
Bootstrap support for A8J015 as seed ortholog is 100%.
Bootstrap support for B4K744 as seed ortholog is 100%.

Group of orthologs #1380. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:123

A8J576              	100.00%		B4K559              	100.00%
A8J0V6              	19.30%		
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for B4K559 as seed ortholog is 100%.

Group of orthologs #1381. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:123

A8IXU5              	100.00%		B4L9F9              	100.00%
                    	       		B4KLK0              	16.20%
Bootstrap support for A8IXU5 as seed ortholog is 100%.
Bootstrap support for B4L9F9 as seed ortholog is 100%.

Group of orthologs #1382. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:123

A8I4B1              	100.00%		B4KB89              	100.00%
Bootstrap support for A8I4B1 as seed ortholog is 100%.
Bootstrap support for B4KB89 as seed ortholog is 100%.

Group of orthologs #1383. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:123

A8HPS0              	100.00%		B4KHQ7              	100.00%
Bootstrap support for A8HPS0 as seed ortholog is 100%.
Bootstrap support for B4KHQ7 as seed ortholog is 100%.

Group of orthologs #1384. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 D.mojavensis:123

A8IZC0              	100.00%		B4K7R3              	100.00%
Bootstrap support for A8IZC0 as seed ortholog is 100%.
Bootstrap support for B4K7R3 as seed ortholog is 100%.

Group of orthologs #1385. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 D.mojavensis:123

A8IFM6              	100.00%		B4KHX4              	100.00%
Bootstrap support for A8IFM6 as seed ortholog is 100%.
Bootstrap support for B4KHX4 as seed ortholog is 100%.

Group of orthologs #1386. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:122

A8HSZ0              	100.00%		B4KJP5              	100.00%
Bootstrap support for A8HSZ0 as seed ortholog is 100%.
Bootstrap support for B4KJP5 as seed ortholog is 100%.

Group of orthologs #1387. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:54

A8HUN2              	100.00%		B4KJ38              	100.00%
Bootstrap support for A8HUN2 as seed ortholog is 98%.
Bootstrap support for B4KJ38 as seed ortholog is 98%.

Group of orthologs #1388. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 D.mojavensis:122

A8IGG2              	100.00%		B4KDA2              	100.00%
Bootstrap support for A8IGG2 as seed ortholog is 93%.
Bootstrap support for B4KDA2 as seed ortholog is 100%.

Group of orthologs #1389. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:122

A8HW82              	100.00%		B4KQ52              	100.00%
Bootstrap support for A8HW82 as seed ortholog is 100%.
Bootstrap support for B4KQ52 as seed ortholog is 100%.

Group of orthologs #1390. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:75

A8I7Y4              	100.00%		B4KV26              	100.00%
Bootstrap support for A8I7Y4 as seed ortholog is 100%.
Bootstrap support for B4KV26 as seed ortholog is 99%.

Group of orthologs #1391. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:122

A8JDW7              	100.00%		B4KMF4              	100.00%
Bootstrap support for A8JDW7 as seed ortholog is 100%.
Bootstrap support for B4KMF4 as seed ortholog is 100%.

Group of orthologs #1392. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 D.mojavensis:122

A8JB53              	100.00%		B4L5S8              	100.00%
Bootstrap support for A8JB53 as seed ortholog is 100%.
Bootstrap support for B4L5S8 as seed ortholog is 100%.

Group of orthologs #1393. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:121

A8JAP1              	100.00%		B4L8N4              	100.00%
A8HNY7              	7.89%		B4L8N3              	13.09%
                    	       		B4L424              	10.24%
                    	       		B4KS30              	5.17%
Bootstrap support for A8JAP1 as seed ortholog is 100%.
Bootstrap support for B4L8N4 as seed ortholog is 100%.

Group of orthologs #1394. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:121

A8IYS5              	100.00%		B4KPG3              	100.00%
                    	       		B4L5D8              	24.92%
                    	       		B4K8F2              	19.72%
                    	       		B4L8C5              	12.09%
Bootstrap support for A8IYS5 as seed ortholog is 100%.
Bootstrap support for B4KPG3 as seed ortholog is 100%.

Group of orthologs #1395. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:72

A8HZ87              	100.00%		B4K4F4              	100.00%
                    	       		B4KB06              	25.19%
Bootstrap support for A8HZ87 as seed ortholog is 100%.
Bootstrap support for B4K4F4 as seed ortholog is 100%.

Group of orthologs #1396. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 D.mojavensis:121

A8JAR0              	100.00%		B4K5T7              	100.00%
A8JAQ8              	63.19%		
Bootstrap support for A8JAR0 as seed ortholog is 59%.
Alternative seed ortholog is A8HMM4 (6 bits away from this cluster)
Bootstrap support for B4K5T7 as seed ortholog is 100%.

Group of orthologs #1397. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:121

A8JES1              	100.00%		B4KMJ8              	100.00%
                    	       		B4L4C8              	39.27%
Bootstrap support for A8JES1 as seed ortholog is 96%.
Bootstrap support for B4KMJ8 as seed ortholog is 100%.

Group of orthologs #1398. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:121

A8I4N7              	100.00%		B4KR43              	100.00%
Bootstrap support for A8I4N7 as seed ortholog is 100%.
Bootstrap support for B4KR43 as seed ortholog is 100%.

Group of orthologs #1399. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 D.mojavensis:121

A8JBM1              	100.00%		B4L2W2              	100.00%
Bootstrap support for A8JBM1 as seed ortholog is 100%.
Bootstrap support for B4L2W2 as seed ortholog is 100%.

Group of orthologs #1400. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:37

A8IG04              	100.00%		B4L7K0              	100.00%
A8J0L2              	11.63%		B4L7K1              	13.30%
                    	       		B4L0X7              	5.95%
Bootstrap support for A8IG04 as seed ortholog is 91%.
Bootstrap support for B4L7K0 as seed ortholog is 88%.

Group of orthologs #1401. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 D.mojavensis:58

A8IHH6              	100.00%		B4KT69              	100.00%
                    	       		B4KQU3              	7.18%
Bootstrap support for A8IHH6 as seed ortholog is 71%.
Alternative seed ortholog is A8JB68 (20 bits away from this cluster)
Bootstrap support for B4KT69 as seed ortholog is 98%.

Group of orthologs #1402. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 D.mojavensis:120

A8I422              	100.00%		B4KNY5              	100.00%
Bootstrap support for A8I422 as seed ortholog is 100%.
Bootstrap support for B4KNY5 as seed ortholog is 100%.

Group of orthologs #1403. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 D.mojavensis:120

A8J092              	100.00%		B4KC05              	100.00%
Bootstrap support for A8J092 as seed ortholog is 100%.
Bootstrap support for B4KC05 as seed ortholog is 100%.

Group of orthologs #1404. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 D.mojavensis:120

A8IRQ1              	100.00%		B4KS42              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for B4KS42 as seed ortholog is 100%.

Group of orthologs #1405. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:28

A8J2I0              	100.00%		B4L124              	100.00%
Bootstrap support for A8J2I0 as seed ortholog is 98%.
Bootstrap support for B4L124 as seed ortholog is 81%.

Group of orthologs #1406. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 D.mojavensis:39

A8JB67              	100.00%		B4KXN7              	100.00%
Bootstrap support for A8JB67 as seed ortholog is 100%.
Bootstrap support for B4KXN7 as seed ortholog is 95%.

Group of orthologs #1407. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:119

A8I3Q3              	100.00%		B4KE86              	100.00%
Bootstrap support for A8I3Q3 as seed ortholog is 100%.
Bootstrap support for B4KE86 as seed ortholog is 100%.

Group of orthologs #1408. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:119

A8IYV4              	100.00%		B4KGX0              	100.00%
Bootstrap support for A8IYV4 as seed ortholog is 100%.
Bootstrap support for B4KGX0 as seed ortholog is 100%.

Group of orthologs #1409. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:119

A8ITT6              	100.00%		B4KSG9              	100.00%
Bootstrap support for A8ITT6 as seed ortholog is 100%.
Bootstrap support for B4KSG9 as seed ortholog is 100%.

Group of orthologs #1410. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:119

A8JFB7              	100.00%		B4KAQ3              	100.00%
Bootstrap support for A8JFB7 as seed ortholog is 100%.
Bootstrap support for B4KAQ3 as seed ortholog is 100%.

Group of orthologs #1411. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:12

A8J5Q5              	100.00%		B4KKV9              	100.00%
Bootstrap support for A8J5Q5 as seed ortholog is 94%.
Bootstrap support for B4KKV9 as seed ortholog is 65%.
Alternative seed ortholog is B4K687 (12 bits away from this cluster)

Group of orthologs #1412. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 D.mojavensis:119

A8IS54              	100.00%		B4L0A2              	100.00%
Bootstrap support for A8IS54 as seed ortholog is 100%.
Bootstrap support for B4L0A2 as seed ortholog is 100%.

Group of orthologs #1413. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 D.mojavensis:119

Q944M8              	100.00%		B4L627              	100.00%
Bootstrap support for Q944M8 as seed ortholog is 93%.
Bootstrap support for B4L627 as seed ortholog is 100%.

Group of orthologs #1414. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J0C5              	100.00%		B4KJ44              	100.00%
                    	       		B4KJ46              	31.23%
                    	       		B4KHT5              	23.35%
                    	       		B4KHT6              	12.42%
Bootstrap support for A8J0C5 as seed ortholog is 100%.
Bootstrap support for B4KJ44 as seed ortholog is 100%.

Group of orthologs #1415. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:41

A8IRX0              	100.00%		B4KJE7              	100.00%
                    	       		B4KJE9              	58.76%
                    	       		B4KJE8              	45.16%
Bootstrap support for A8IRX0 as seed ortholog is 100%.
Bootstrap support for B4KJE7 as seed ortholog is 89%.

Group of orthologs #1416. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 D.mojavensis:50

A8IY95              	100.00%		B4KQZ2              	100.00%
                    	       		B4LAW0              	37.89%
Bootstrap support for A8IY95 as seed ortholog is 59%.
Alternative seed ortholog is Q9SWQ6 (4 bits away from this cluster)
Bootstrap support for B4KQZ2 as seed ortholog is 99%.

Group of orthologs #1417. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:18

A8HM62              	100.00%		B4K608              	100.00%
Bootstrap support for A8HM62 as seed ortholog is 62%.
Alternative seed ortholog is A8I4J6 (3 bits away from this cluster)
Bootstrap support for B4K608 as seed ortholog is 75%.

Group of orthologs #1418. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8ISN7              	100.00%		B4KMC0              	100.00%
Bootstrap support for A8ISN7 as seed ortholog is 100%.
Bootstrap support for B4KMC0 as seed ortholog is 100%.

Group of orthologs #1419. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J1A3              	100.00%		B4KIG7              	100.00%
Bootstrap support for A8J1A3 as seed ortholog is 100%.
Bootstrap support for B4KIG7 as seed ortholog is 100%.

Group of orthologs #1420. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J999              	100.00%		B4KBP2              	100.00%
Bootstrap support for A8J999 as seed ortholog is 100%.
Bootstrap support for B4KBP2 as seed ortholog is 100%.

Group of orthologs #1421. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8HQ58              	100.00%		B4L3T3              	100.00%
Bootstrap support for A8HQ58 as seed ortholog is 100%.
Bootstrap support for B4L3T3 as seed ortholog is 100%.

Group of orthologs #1422. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J5B5              	100.00%		B4KG86              	100.00%
Bootstrap support for A8J5B5 as seed ortholog is 100%.
Bootstrap support for B4KG86 as seed ortholog is 100%.

Group of orthologs #1423. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J9F7              	100.00%		B4KPD9              	100.00%
Bootstrap support for A8J9F7 as seed ortholog is 100%.
Bootstrap support for B4KPD9 as seed ortholog is 100%.

Group of orthologs #1424. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J2V4              	100.00%		B4KWQ5              	100.00%
Bootstrap support for A8J2V4 as seed ortholog is 100%.
Bootstrap support for B4KWQ5 as seed ortholog is 100%.

Group of orthologs #1425. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 D.mojavensis:118

A8J2Z8              	100.00%		B4L9J6              	100.00%
Bootstrap support for A8J2Z8 as seed ortholog is 100%.
Bootstrap support for B4L9J6 as seed ortholog is 100%.

Group of orthologs #1426. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:117

A8JGL2              	100.00%		B4KKB7              	100.00%
                    	       		B4KKB6              	24.49%
Bootstrap support for A8JGL2 as seed ortholog is 100%.
Bootstrap support for B4KKB7 as seed ortholog is 100%.

Group of orthologs #1427. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:117

Q6U9W9              	100.00%		B4KGK5              	100.00%
                    	       		B4KIA3              	35.12%
Bootstrap support for Q6U9W9 as seed ortholog is 100%.
Bootstrap support for B4KGK5 as seed ortholog is 100%.

Group of orthologs #1428. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:117

A8IV25              	100.00%		B4K7D9              	100.00%
Bootstrap support for A8IV25 as seed ortholog is 100%.
Bootstrap support for B4K7D9 as seed ortholog is 100%.

Group of orthologs #1429. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:117

A8JDX0              	100.00%		B4KCB5              	100.00%
Bootstrap support for A8JDX0 as seed ortholog is 100%.
Bootstrap support for B4KCB5 as seed ortholog is 100%.

Group of orthologs #1430. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:117

A8JCC6              	100.00%		B4KFI9              	100.00%
Bootstrap support for A8JCC6 as seed ortholog is 100%.
Bootstrap support for B4KFI9 as seed ortholog is 100%.

Group of orthologs #1431. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 D.mojavensis:117

A8J9J7              	100.00%		B4KND5              	100.00%
Bootstrap support for A8J9J7 as seed ortholog is 100%.
Bootstrap support for B4KND5 as seed ortholog is 100%.

Group of orthologs #1432. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8I9U1              	100.00%		B4KBR0              	100.00%
A8I9T9              	66.55%		
A8J400              	26.49%		
Bootstrap support for A8I9U1 as seed ortholog is 100%.
Bootstrap support for B4KBR0 as seed ortholog is 100%.

Group of orthologs #1433. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:116

A8IS57              	100.00%		B4K7Y9              	100.00%
                    	       		B4K7Y8              	38.22%
                    	       		B4KJV2              	32.61%
Bootstrap support for A8IS57 as seed ortholog is 96%.
Bootstrap support for B4K7Y9 as seed ortholog is 100%.

Group of orthologs #1434. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8J6F1              	100.00%		B4L8U7              	100.00%
                    	       		B4LA63              	100.00%
Bootstrap support for A8J6F1 as seed ortholog is 100%.
Bootstrap support for B4L8U7 as seed ortholog is 100%.
Bootstrap support for B4LA63 as seed ortholog is 100%.

Group of orthologs #1435. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 D.mojavensis:69

A8I762              	100.00%		B4KFW1              	100.00%
Bootstrap support for A8I762 as seed ortholog is 78%.
Bootstrap support for B4KFW1 as seed ortholog is 98%.

Group of orthologs #1436. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8IV17              	100.00%		B4KBU5              	100.00%
Bootstrap support for A8IV17 as seed ortholog is 100%.
Bootstrap support for B4KBU5 as seed ortholog is 100%.

Group of orthologs #1437. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:60

A8IRX8              	100.00%		B4KFM2              	100.00%
Bootstrap support for A8IRX8 as seed ortholog is 100%.
Bootstrap support for B4KFM2 as seed ortholog is 88%.

Group of orthologs #1438. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8I699              	100.00%		B4KPS8              	100.00%
Bootstrap support for A8I699 as seed ortholog is 100%.
Bootstrap support for B4KPS8 as seed ortholog is 100%.

Group of orthologs #1439. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8IA67              	100.00%		B4KNS4              	100.00%
Bootstrap support for A8IA67 as seed ortholog is 100%.
Bootstrap support for B4KNS4 as seed ortholog is 100%.

Group of orthologs #1440. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8JD59              	100.00%		B4KC04              	100.00%
Bootstrap support for A8JD59 as seed ortholog is 100%.
Bootstrap support for B4KC04 as seed ortholog is 100%.

Group of orthologs #1441. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 D.mojavensis:116

A8J2L7              	100.00%		B4KQL6              	100.00%
Bootstrap support for A8J2L7 as seed ortholog is 100%.
Bootstrap support for B4KQL6 as seed ortholog is 100%.

Group of orthologs #1442. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:116

A8JGX7              	100.00%		B4KDB2              	100.00%
Bootstrap support for A8JGX7 as seed ortholog is 99%.
Bootstrap support for B4KDB2 as seed ortholog is 100%.

Group of orthologs #1443. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:115

A8I6I8              	100.00%		B4KT31              	100.00%
                    	       		B4KUB4              	32.51%
                    	       		B4KBP9              	23.51%
                    	       		B4KUB5              	23.27%
                    	       		B4KXV4              	23.16%
                    	       		B4KT30              	11.11%
                    	       		B4L2Y9              	6.43%
                    	       		B4KSN9              	6.32%
                    	       		B4KM83              	5.26%
Bootstrap support for A8I6I8 as seed ortholog is 89%.
Bootstrap support for B4KT31 as seed ortholog is 100%.

Group of orthologs #1444. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 D.mojavensis:23

A8J2C6              	100.00%		B4L6D0              	100.00%
A8J2C7              	34.73%		B4KEJ6              	13.04%
A8IS80              	10.05%		
A8HNM7              	9.44%		
A8IX93              	5.56%		
Bootstrap support for A8J2C6 as seed ortholog is 79%.
Bootstrap support for B4L6D0 as seed ortholog is 71%.
Alternative seed ortholog is B4L6K3 (23 bits away from this cluster)

Group of orthologs #1445. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8IDD8              	100.00%		B4KEZ7              	100.00%
                    	       		B4K7J7              	12.50%
Bootstrap support for A8IDD8 as seed ortholog is 100%.
Bootstrap support for B4KEZ7 as seed ortholog is 100%.

Group of orthologs #1446. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8IF44              	100.00%		B4KPA4              	100.00%
                    	       		B4KPA3              	23.44%
Bootstrap support for A8IF44 as seed ortholog is 100%.
Bootstrap support for B4KPA4 as seed ortholog is 100%.

Group of orthologs #1447. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8HSJ0              	100.00%		B4K516              	100.00%
Bootstrap support for A8HSJ0 as seed ortholog is 100%.
Bootstrap support for B4K516 as seed ortholog is 100%.

Group of orthologs #1448. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8HXD3              	100.00%		B4K9U1              	100.00%
Bootstrap support for A8HXD3 as seed ortholog is 100%.
Bootstrap support for B4K9U1 as seed ortholog is 100%.

Group of orthologs #1449. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8I0Q1              	100.00%		B4KST3              	100.00%
Bootstrap support for A8I0Q1 as seed ortholog is 100%.
Bootstrap support for B4KST3 as seed ortholog is 100%.

Group of orthologs #1450. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8IRB6              	100.00%		B4KKX6              	100.00%
Bootstrap support for A8IRB6 as seed ortholog is 100%.
Bootstrap support for B4KKX6 as seed ortholog is 100%.

Group of orthologs #1451. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8INS5              	100.00%		B4KNV4              	100.00%
Bootstrap support for A8INS5 as seed ortholog is 100%.
Bootstrap support for B4KNV4 as seed ortholog is 100%.

Group of orthologs #1452. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 D.mojavensis:115

A8IYH0              	100.00%		B4KY54              	100.00%
Bootstrap support for A8IYH0 as seed ortholog is 100%.
Bootstrap support for B4KY54 as seed ortholog is 100%.

Group of orthologs #1453. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:114

A8IS74              	100.00%		B4KDE6              	100.00%
Bootstrap support for A8IS74 as seed ortholog is 100%.
Bootstrap support for B4KDE6 as seed ortholog is 100%.

Group of orthologs #1454. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:114

A8J266              	100.00%		B4KJW0              	100.00%
Bootstrap support for A8J266 as seed ortholog is 100%.
Bootstrap support for B4KJW0 as seed ortholog is 100%.

Group of orthologs #1455. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 D.mojavensis:114

A8JHQ6              	100.00%		B4K610              	100.00%
Bootstrap support for A8JHQ6 as seed ortholog is 100%.
Bootstrap support for B4K610 as seed ortholog is 100%.

Group of orthologs #1456. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 D.mojavensis:43

A8HWG8              	100.00%		B4L813              	100.00%
                    	       		B4K6S3              	50.36%
Bootstrap support for A8HWG8 as seed ortholog is 84%.
Bootstrap support for B4L813 as seed ortholog is 94%.

Group of orthologs #1457. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:113

A8I4U4              	100.00%		B4KB40              	100.00%
Bootstrap support for A8I4U4 as seed ortholog is 100%.
Bootstrap support for B4KB40 as seed ortholog is 100%.

Group of orthologs #1458. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:113

A8I5Y2              	100.00%		B4KHB3              	100.00%
Bootstrap support for A8I5Y2 as seed ortholog is 100%.
Bootstrap support for B4KHB3 as seed ortholog is 100%.

Group of orthologs #1459. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:113

A8IT97              	100.00%		B4KA53              	100.00%
Bootstrap support for A8IT97 as seed ortholog is 100%.
Bootstrap support for B4KA53 as seed ortholog is 100%.

Group of orthologs #1460. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:113

A8IA47              	100.00%		B4KMZ0              	100.00%
Bootstrap support for A8IA47 as seed ortholog is 100%.
Bootstrap support for B4KMZ0 as seed ortholog is 100%.

Group of orthologs #1461. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:113

A8II37              	100.00%		B4KUA5              	100.00%
Bootstrap support for A8II37 as seed ortholog is 100%.
Bootstrap support for B4KUA5 as seed ortholog is 100%.

Group of orthologs #1462. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 D.mojavensis:49

A8J0N9              	100.00%		B4KN09              	100.00%
Bootstrap support for A8J0N9 as seed ortholog is 91%.
Bootstrap support for B4KN09 as seed ortholog is 95%.

Group of orthologs #1463. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:113

A8JCS9              	100.00%		B4KME6              	100.00%
Bootstrap support for A8JCS9 as seed ortholog is 100%.
Bootstrap support for B4KME6 as seed ortholog is 100%.

Group of orthologs #1464. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 D.mojavensis:51

A8IK60              	100.00%		B4L7V7              	100.00%
Bootstrap support for A8IK60 as seed ortholog is 100%.
Bootstrap support for B4L7V7 as seed ortholog is 95%.

Group of orthologs #1465. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:39

A8J4I2              	100.00%		B4L1S5              	100.00%
A8JDG6              	100.00%		B4KCA0              	100.00%
Bootstrap support for A8J4I2 as seed ortholog is 97%.
Bootstrap support for A8JDG6 as seed ortholog is 98%.
Bootstrap support for B4L1S5 as seed ortholog is 76%.
Bootstrap support for B4KCA0 as seed ortholog is 73%.
Alternative seed ortholog is B4KJG1 (39 bits away from this cluster)

Group of orthologs #1466. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:40

A8J1F9              	100.00%		B4K4Y5              	100.00%
Bootstrap support for A8J1F9 as seed ortholog is 100%.
Bootstrap support for B4K4Y5 as seed ortholog is 96%.

Group of orthologs #1467. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

A8IRS7              	100.00%		B4KF35              	100.00%
Bootstrap support for A8IRS7 as seed ortholog is 100%.
Bootstrap support for B4KF35 as seed ortholog is 100%.

Group of orthologs #1468. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

A8J8P4              	100.00%		B4K6E1              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for B4K6E1 as seed ortholog is 100%.

Group of orthologs #1469. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

A8IJ71              	100.00%		B4KZ91              	100.00%
Bootstrap support for A8IJ71 as seed ortholog is 100%.
Bootstrap support for B4KZ91 as seed ortholog is 100%.

Group of orthologs #1470. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

A8J2R2              	100.00%		B4KNV3              	100.00%
Bootstrap support for A8J2R2 as seed ortholog is 100%.
Bootstrap support for B4KNV3 as seed ortholog is 100%.

Group of orthologs #1471. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

A8HSI6              	100.00%		B4L9P6              	100.00%
Bootstrap support for A8HSI6 as seed ortholog is 100%.
Bootstrap support for B4L9P6 as seed ortholog is 100%.

Group of orthologs #1472. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

A8IU13              	100.00%		B4L3L1              	100.00%
Bootstrap support for A8IU13 as seed ortholog is 100%.
Bootstrap support for B4L3L1 as seed ortholog is 100%.

Group of orthologs #1473. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 D.mojavensis:112

Q8S4W5              	100.00%		B4KQ28              	100.00%
Bootstrap support for Q8S4W5 as seed ortholog is 100%.
Bootstrap support for B4KQ28 as seed ortholog is 100%.

Group of orthologs #1474. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8HR64              	100.00%		B4KSK6              	100.00%
                    	       		B4KHT1              	24.42%
Bootstrap support for A8HR64 as seed ortholog is 100%.
Bootstrap support for B4KSK6 as seed ortholog is 100%.

Group of orthologs #1475. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8HP31              	100.00%		B4K7G2              	100.00%
Bootstrap support for A8HP31 as seed ortholog is 100%.
Bootstrap support for B4K7G2 as seed ortholog is 100%.

Group of orthologs #1476. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8INB8              	100.00%		B4KAZ0              	100.00%
Bootstrap support for A8INB8 as seed ortholog is 100%.
Bootstrap support for B4KAZ0 as seed ortholog is 100%.

Group of orthologs #1477. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8J756              	100.00%		B4KHS5              	100.00%
Bootstrap support for A8J756 as seed ortholog is 100%.
Bootstrap support for B4KHS5 as seed ortholog is 100%.

Group of orthologs #1478. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8J7J4              	100.00%		B4KIT6              	100.00%
Bootstrap support for A8J7J4 as seed ortholog is 100%.
Bootstrap support for B4KIT6 as seed ortholog is 100%.

Group of orthologs #1479. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8I832              	100.00%		B4L3F6              	100.00%
Bootstrap support for A8I832 as seed ortholog is 100%.
Bootstrap support for B4L3F6 as seed ortholog is 100%.

Group of orthologs #1480. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8ICX2              	100.00%		B4L6Z9              	100.00%
Bootstrap support for A8ICX2 as seed ortholog is 100%.
Bootstrap support for B4L6Z9 as seed ortholog is 100%.

Group of orthologs #1481. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 D.mojavensis:111

A8J743              	100.00%		B4KUK1              	100.00%
Bootstrap support for A8J743 as seed ortholog is 100%.
Bootstrap support for B4KUK1 as seed ortholog is 100%.

Group of orthologs #1482. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 D.mojavensis:33

A8J3W4              	100.00%		B4KSY0              	100.00%
                    	       		B4L7T7              	100.00%
                    	       		B4K8H4              	5.15%
Bootstrap support for A8J3W4 as seed ortholog is 75%.
Bootstrap support for B4KSY0 as seed ortholog is 92%.
Bootstrap support for B4L7T7 as seed ortholog is 94%.

Group of orthologs #1483. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 D.mojavensis:24

A8HWV7              	100.00%		B4L5H5              	100.00%
A8JGU0              	9.91%		
Bootstrap support for A8HWV7 as seed ortholog is 100%.
Bootstrap support for B4L5H5 as seed ortholog is 67%.
Alternative seed ortholog is B4L451 (24 bits away from this cluster)

Group of orthologs #1484. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 D.mojavensis:110

A8IU94              	100.00%		B4K628              	100.00%
Bootstrap support for A8IU94 as seed ortholog is 100%.
Bootstrap support for B4K628 as seed ortholog is 100%.

Group of orthologs #1485. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 D.mojavensis:110

A8J342              	100.00%		B4KR42              	100.00%
Bootstrap support for A8J342 as seed ortholog is 100%.
Bootstrap support for B4KR42 as seed ortholog is 100%.

Group of orthologs #1486. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 D.mojavensis:109

A8IB95              	100.00%		B4K5T2              	100.00%
A8I768              	7.45%		B4K5T0              	93.17%
                    	       		B4K5T3              	88.94%
Bootstrap support for A8IB95 as seed ortholog is 74%.
Alternative seed ortholog is A8IX35 (28 bits away from this cluster)
Bootstrap support for B4K5T2 as seed ortholog is 100%.

Group of orthologs #1487. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8HMZ4              	100.00%		B4K540              	100.00%
Bootstrap support for A8HMZ4 as seed ortholog is 100%.
Bootstrap support for B4K540 as seed ortholog is 100%.

Group of orthologs #1488. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8ICD3              	100.00%		B4KCP7              	100.00%
Bootstrap support for A8ICD3 as seed ortholog is 100%.
Bootstrap support for B4KCP7 as seed ortholog is 100%.

Group of orthologs #1489. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8IUW8              	100.00%		B4K7A6              	100.00%
Bootstrap support for A8IUW8 as seed ortholog is 100%.
Bootstrap support for B4K7A6 as seed ortholog is 100%.

Group of orthologs #1490. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8ICE1              	100.00%		B4KIL8              	100.00%
Bootstrap support for A8ICE1 as seed ortholog is 100%.
Bootstrap support for B4KIL8 as seed ortholog is 100%.

Group of orthologs #1491. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8J3B5              	100.00%		B4KAD1              	100.00%
Bootstrap support for A8J3B5 as seed ortholog is 100%.
Bootstrap support for B4KAD1 as seed ortholog is 100%.

Group of orthologs #1492. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8IFE6              	100.00%		B4KRQ2              	100.00%
Bootstrap support for A8IFE6 as seed ortholog is 100%.
Bootstrap support for B4KRQ2 as seed ortholog is 100%.

Group of orthologs #1493. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8HSS5              	100.00%		B4L3K9              	100.00%
Bootstrap support for A8HSS5 as seed ortholog is 100%.
Bootstrap support for B4L3K9 as seed ortholog is 100%.

Group of orthologs #1494. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8JGT7              	100.00%		B4KQ29              	100.00%
Bootstrap support for A8JGT7 as seed ortholog is 100%.
Bootstrap support for B4KQ29 as seed ortholog is 100%.

Group of orthologs #1495. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8J6H6              	100.00%		B4L603              	100.00%
Bootstrap support for A8J6H6 as seed ortholog is 100%.
Bootstrap support for B4L603 as seed ortholog is 100%.

Group of orthologs #1496. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

A8JEC1              	100.00%		B4L7Z6              	100.00%
Bootstrap support for A8JEC1 as seed ortholog is 100%.
Bootstrap support for B4L7Z6 as seed ortholog is 100%.

Group of orthologs #1497. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 D.mojavensis:109

Q84TR5              	100.00%		B4L640              	100.00%
Bootstrap support for Q84TR5 as seed ortholog is 100%.
Bootstrap support for B4L640 as seed ortholog is 100%.

Group of orthologs #1498. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8J9P5              	100.00%		B4KSK7              	100.00%
A8JCB8              	10.81%		B4L3Z3              	6.16%
A8JCB4              	7.48%		B4KY43              	5.23%
Bootstrap support for A8J9P5 as seed ortholog is 100%.
Bootstrap support for B4KSK7 as seed ortholog is 100%.

Group of orthologs #1499. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8HQ01              	100.00%		B4KLA8              	100.00%
                    	       		B4K6G7              	8.50%
                    	       		B4KC35              	7.32%
Bootstrap support for A8HQ01 as seed ortholog is 100%.
Bootstrap support for B4KLA8 as seed ortholog is 100%.

Group of orthologs #1500. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8ICB0              	100.00%		B4L6B8              	100.00%
                    	       		B4L6N7              	19.55%
Bootstrap support for A8ICB0 as seed ortholog is 100%.
Bootstrap support for B4L6B8 as seed ortholog is 100%.

Group of orthologs #1501. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:57

A8ICA8              	100.00%		B4L7X7              	100.00%
                    	       		B4KFL3              	28.74%
Bootstrap support for A8ICA8 as seed ortholog is 89%.
Bootstrap support for B4L7X7 as seed ortholog is 92%.

Group of orthologs #1502. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8IW01              	100.00%		B4L4B0              	100.00%
                    	       		B4KWK9              	28.14%
Bootstrap support for A8IW01 as seed ortholog is 100%.
Bootstrap support for B4L4B0 as seed ortholog is 100%.

Group of orthologs #1503. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8IQS1              	100.00%		B4LAZ8              	100.00%
                    	       		B4K6A7              	19.27%
Bootstrap support for A8IQS1 as seed ortholog is 100%.
Bootstrap support for B4LAZ8 as seed ortholog is 100%.

Group of orthologs #1504. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8HYD5              	100.00%		B4KUM5              	100.00%
Bootstrap support for A8HYD5 as seed ortholog is 100%.
Bootstrap support for B4KUM5 as seed ortholog is 100%.

Group of orthologs #1505. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8IZN9              	100.00%		B4KJL5              	100.00%
Bootstrap support for A8IZN9 as seed ortholog is 100%.
Bootstrap support for B4KJL5 as seed ortholog is 100%.

Group of orthologs #1506. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8JI36              	100.00%		B4K4P8              	100.00%
Bootstrap support for A8JI36 as seed ortholog is 100%.
Bootstrap support for B4K4P8 as seed ortholog is 100%.

Group of orthologs #1507. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8J1U3              	100.00%		B4KS24              	100.00%
Bootstrap support for A8J1U3 as seed ortholog is 100%.
Bootstrap support for B4KS24 as seed ortholog is 100%.

Group of orthologs #1508. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:108

A8J2K2              	100.00%		B4L015              	100.00%
Bootstrap support for A8J2K2 as seed ortholog is 99%.
Bootstrap support for B4L015 as seed ortholog is 100%.

Group of orthologs #1509. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 D.mojavensis:108

A8JI92              	100.00%		B4L9J8              	100.00%
Bootstrap support for A8JI92 as seed ortholog is 100%.
Bootstrap support for B4L9J8 as seed ortholog is 100%.

Group of orthologs #1510. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:107

A8JCF2              	100.00%		B4L276              	100.00%
                    	       		B4KD04              	11.72%
                    	       		B4KD05              	8.33%
                    	       		B4KCA6              	7.38%
                    	       		B4KCA5              	5.90%
                    	       		B4L1Q6              	5.03%
Bootstrap support for A8JCF2 as seed ortholog is 100%.
Bootstrap support for B4L276 as seed ortholog is 100%.

Group of orthologs #1511. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:107

A8HZ43              	100.00%		B4KA47              	100.00%
Bootstrap support for A8HZ43 as seed ortholog is 100%.
Bootstrap support for B4KA47 as seed ortholog is 100%.

Group of orthologs #1512. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:107

A8HQG5              	100.00%		B4KJV3              	100.00%
Bootstrap support for A8HQG5 as seed ortholog is 100%.
Bootstrap support for B4KJV3 as seed ortholog is 100%.

Group of orthologs #1513. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:15

A8IZN2              	100.00%		B4K560              	100.00%
Bootstrap support for A8IZN2 as seed ortholog is 100%.
Bootstrap support for B4K560 as seed ortholog is 95%.

Group of orthologs #1514. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:107

A8J1N7              	100.00%		B4KA04              	100.00%
Bootstrap support for A8J1N7 as seed ortholog is 100%.
Bootstrap support for B4KA04 as seed ortholog is 100%.

Group of orthologs #1515. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 D.mojavensis:107

A8JHW7              	100.00%		B4KTN5              	100.00%
Bootstrap support for A8JHW7 as seed ortholog is 100%.
Bootstrap support for B4KTN5 as seed ortholog is 100%.

Group of orthologs #1516. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 D.mojavensis:106

A8I7C1              	100.00%		B4KAJ2              	100.00%
                    	       		B4KAJ3              	65.40%
                    	       		B4KAJ5              	35.86%
                    	       		B4KAJ0              	31.72%
                    	       		B4KAJ6              	30.80%
                    	       		B4KPM9              	24.14%
                    	       		B4LAD2              	23.68%
                    	       		B4KK30              	23.56%
                    	       		B4KPM8              	22.41%
                    	       		B4KPM7              	22.07%
                    	       		B4KGR9              	21.84%
                    	       		B4KC71              	21.61%
                    	       		B4KAJ7              	20.92%
                    	       		B4KH53              	19.66%
                    	       		B4KAJ8              	19.08%
                    	       		B4KH54              	18.16%
                    	       		B4KG02              	17.47%
                    	       		B4KY17              	17.36%
                    	       		B4KZ94              	17.24%
                    	       		B4KWJ5              	16.90%
                    	       		B4KHY3              	16.21%
                    	       		B4KHY1              	15.29%
                    	       		B4KHY2              	14.25%
                    	       		B4KG01              	14.02%
                    	       		B4KAR8              	11.84%
                    	       		B4KK77              	8.39%
                    	       		B4KJ52              	8.05%
                    	       		B4KTE6              	7.24%
Bootstrap support for A8I7C1 as seed ortholog is 100%.
Bootstrap support for B4KAJ2 as seed ortholog is 100%.

Group of orthologs #1517. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 D.mojavensis:106

A8JCT6              	100.00%		B4KAD7              	100.00%
A8IR44              	6.50%		
Bootstrap support for A8JCT6 as seed ortholog is 100%.
Bootstrap support for B4KAD7 as seed ortholog is 100%.

Group of orthologs #1518. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 D.mojavensis:30

A8I9C1              	100.00%		B4K5J3              	100.00%
Bootstrap support for A8I9C1 as seed ortholog is 84%.
Bootstrap support for B4K5J3 as seed ortholog is 79%.

Group of orthologs #1519. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 D.mojavensis:106

A8IIM4              	100.00%		B4KCL6              	100.00%
Bootstrap support for A8IIM4 as seed ortholog is 100%.
Bootstrap support for B4KCL6 as seed ortholog is 100%.

Group of orthologs #1520. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 D.mojavensis:106

A8HU61              	100.00%		B4L098              	100.00%
Bootstrap support for A8HU61 as seed ortholog is 100%.
Bootstrap support for B4L098 as seed ortholog is 100%.

Group of orthologs #1521. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 D.mojavensis:106

A8IVB1              	100.00%		B4KNC1              	100.00%
Bootstrap support for A8IVB1 as seed ortholog is 100%.
Bootstrap support for B4KNC1 as seed ortholog is 100%.

Group of orthologs #1522. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 D.mojavensis:106

A8IKY9              	100.00%		B4KUL6              	100.00%
Bootstrap support for A8IKY9 as seed ortholog is 100%.
Bootstrap support for B4KUL6 as seed ortholog is 100%.

Group of orthologs #1523. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 D.mojavensis:105

A8HQ85              	100.00%		B4KR45              	100.00%
Bootstrap support for A8HQ85 as seed ortholog is 100%.
Bootstrap support for B4KR45 as seed ortholog is 100%.

Group of orthologs #1524. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 D.mojavensis:105

A8JGT2              	100.00%		B4KVE2              	100.00%
Bootstrap support for A8JGT2 as seed ortholog is 100%.
Bootstrap support for B4KVE2 as seed ortholog is 100%.

Group of orthologs #1525. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:7

A8IF06              	100.00%		B4KE87              	100.00%
                    	       		B4KWF7              	32.26%
                    	       		B4KWF6              	26.39%
                    	       		B4KVS3              	25.00%
                    	       		B4KSQ0              	24.04%
                    	       		B4L4T5              	23.72%
                    	       		B4KUY1              	23.18%
                    	       		B4L4T4              	19.12%
                    	       		B4KPZ2              	18.27%
                    	       		B4KWF9              	16.35%
                    	       		B4KWG0              	16.35%
                    	       		B4KWF8              	13.35%
Bootstrap support for A8IF06 as seed ortholog is 100%.
Bootstrap support for B4KE87 as seed ortholog is 45%.
Alternative seed ortholog is B4KRC5 (7 bits away from this cluster)

Group of orthologs #1526. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 D.mojavensis:17

A8I6W6              	100.00%		B4KL91              	100.00%
                    	       		B4KLB8              	100.00%
Bootstrap support for A8I6W6 as seed ortholog is 65%.
Alternative seed ortholog is A8I3P1 (1 bits away from this cluster)
Bootstrap support for B4KL91 as seed ortholog is 74%.
Alternative seed ortholog is B4K8M4 (17 bits away from this cluster)
Bootstrap support for B4KLB8 as seed ortholog is 73%.
Alternative seed ortholog is B4K8M4 (17 bits away from this cluster)

Group of orthologs #1527. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8HUN7              	100.00%		B4KGH7              	100.00%
Bootstrap support for A8HUN7 as seed ortholog is 100%.
Bootstrap support for B4KGH7 as seed ortholog is 100%.

Group of orthologs #1528. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8I2L0              	100.00%		B4KN82              	100.00%
Bootstrap support for A8I2L0 as seed ortholog is 100%.
Bootstrap support for B4KN82 as seed ortholog is 100%.

Group of orthologs #1529. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:57

A8IR04              	100.00%		B4KLC5              	100.00%
Bootstrap support for A8IR04 as seed ortholog is 100%.
Bootstrap support for B4KLC5 as seed ortholog is 99%.

Group of orthologs #1530. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 D.mojavensis:104

A8HVL4              	100.00%		B4KYK9              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 69%.
Alternative seed ortholog is A8J9N5 (13 bits away from this cluster)
Bootstrap support for B4KYK9 as seed ortholog is 100%.

Group of orthologs #1531. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8JB43              	100.00%		B4K7D6              	100.00%
Bootstrap support for A8JB43 as seed ortholog is 100%.
Bootstrap support for B4K7D6 as seed ortholog is 100%.

Group of orthologs #1532. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8J1K4              	100.00%		B4KGL6              	100.00%
Bootstrap support for A8J1K4 as seed ortholog is 100%.
Bootstrap support for B4KGL6 as seed ortholog is 100%.

Group of orthologs #1533. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8ISS9              	100.00%		B4KWA0              	100.00%
Bootstrap support for A8ISS9 as seed ortholog is 100%.
Bootstrap support for B4KWA0 as seed ortholog is 100%.

Group of orthologs #1534. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8J5C4              	100.00%		B4KMA4              	100.00%
Bootstrap support for A8J5C4 as seed ortholog is 100%.
Bootstrap support for B4KMA4 as seed ortholog is 100%.

Group of orthologs #1535. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8JB22              	100.00%		B4KP98              	100.00%
Bootstrap support for A8JB22 as seed ortholog is 100%.
Bootstrap support for B4KP98 as seed ortholog is 100%.

Group of orthologs #1536. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8JGN3              	100.00%		B4KND0              	100.00%
Bootstrap support for A8JGN3 as seed ortholog is 100%.
Bootstrap support for B4KND0 as seed ortholog is 100%.

Group of orthologs #1537. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8J0A9              	100.00%		B4L7T1              	100.00%
Bootstrap support for A8J0A9 as seed ortholog is 100%.
Bootstrap support for B4L7T1 as seed ortholog is 100%.

Group of orthologs #1538. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 D.mojavensis:104

A8JHU2              	100.00%		B4L7U2              	100.00%
Bootstrap support for A8JHU2 as seed ortholog is 100%.
Bootstrap support for B4L7U2 as seed ortholog is 100%.

Group of orthologs #1539. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:31

Q5VLJ9              	100.00%		B4KR23              	100.00%
A8IR22              	5.77%		B4KR22              	21.52%
                    	       		B4KS07              	12.86%
                    	       		B4KS08              	9.71%
Bootstrap support for Q5VLJ9 as seed ortholog is 100%.
Bootstrap support for B4KR23 as seed ortholog is 84%.

Group of orthologs #1540. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:103

A8I0Y2              	100.00%		B4KD99              	100.00%
Bootstrap support for A8I0Y2 as seed ortholog is 100%.
Bootstrap support for B4KD99 as seed ortholog is 100%.

Group of orthologs #1541. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:103

A8IUG4              	100.00%		B4K5J5              	100.00%
Bootstrap support for A8IUG4 as seed ortholog is 100%.
Bootstrap support for B4K5J5 as seed ortholog is 100%.

Group of orthologs #1542. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 D.mojavensis:103

A8IYZ6              	100.00%		B4KAB4              	100.00%
Bootstrap support for A8IYZ6 as seed ortholog is 70%.
Alternative seed ortholog is A8HPD9 (8 bits away from this cluster)
Bootstrap support for B4KAB4 as seed ortholog is 100%.

Group of orthologs #1543. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:103

A8IS18              	100.00%		B4KVY7              	100.00%
Bootstrap support for A8IS18 as seed ortholog is 100%.
Bootstrap support for B4KVY7 as seed ortholog is 100%.

Group of orthologs #1544. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 D.mojavensis:103

A8JI10              	100.00%		B4KBJ9              	100.00%
Bootstrap support for A8JI10 as seed ortholog is 100%.
Bootstrap support for B4KBJ9 as seed ortholog is 100%.

Group of orthologs #1545. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 D.mojavensis:102

A8HXY3              	100.00%		B4L153              	100.00%
A8I1K5              	22.03%		
A8HPB8              	5.24%		
Bootstrap support for A8HXY3 as seed ortholog is 80%.
Bootstrap support for B4L153 as seed ortholog is 100%.

Group of orthologs #1546. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8IAZ4              	100.00%		B4K665              	100.00%
                    	       		B4KLJ8              	16.28%
Bootstrap support for A8IAZ4 as seed ortholog is 100%.
Bootstrap support for B4K665 as seed ortholog is 100%.

Group of orthologs #1547. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8IE68              	100.00%		B4KSU4              	100.00%
A8IFN7              	14.61%		
Bootstrap support for A8IE68 as seed ortholog is 100%.
Bootstrap support for B4KSU4 as seed ortholog is 100%.

Group of orthologs #1548. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8JHP9              	100.00%		B4K4J1              	100.00%
A8J074              	15.41%		
Bootstrap support for A8JHP9 as seed ortholog is 100%.
Bootstrap support for B4K4J1 as seed ortholog is 100%.

Group of orthologs #1549. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8J0T7              	100.00%		B4L2H8              	100.00%
P14149              	21.14%		
Bootstrap support for A8J0T7 as seed ortholog is 100%.
Bootstrap support for B4L2H8 as seed ortholog is 100%.

Group of orthologs #1550. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A2T2X4              	100.00%		B4KFK4              	100.00%
Bootstrap support for A2T2X4 as seed ortholog is 100%.
Bootstrap support for B4KFK4 as seed ortholog is 100%.

Group of orthologs #1551. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8HRP7              	100.00%		B4KFR9              	100.00%
Bootstrap support for A8HRP7 as seed ortholog is 100%.
Bootstrap support for B4KFR9 as seed ortholog is 100%.

Group of orthologs #1552. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8IC48              	100.00%		B4KYT0              	100.00%
Bootstrap support for A8IC48 as seed ortholog is 100%.
Bootstrap support for B4KYT0 as seed ortholog is 100%.

Group of orthologs #1553. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8IWX3              	100.00%		B4KQJ4              	100.00%
Bootstrap support for A8IWX3 as seed ortholog is 100%.
Bootstrap support for B4KQJ4 as seed ortholog is 100%.

Group of orthologs #1554. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 D.mojavensis:102

A8IZC9              	100.00%		B4L2P9              	100.00%
Bootstrap support for A8IZC9 as seed ortholog is 100%.
Bootstrap support for B4L2P9 as seed ortholog is 100%.

Group of orthologs #1555. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 D.mojavensis:101

A8JAW5              	100.00%		B4K4V2              	100.00%
Bootstrap support for A8JAW5 as seed ortholog is 95%.
Bootstrap support for B4K4V2 as seed ortholog is 100%.

Group of orthologs #1556. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:101

A8IE04              	100.00%		B4KVH4              	100.00%
Bootstrap support for A8IE04 as seed ortholog is 100%.
Bootstrap support for B4KVH4 as seed ortholog is 100%.

Group of orthologs #1557. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:101

A8JHA6              	100.00%		B4K7W2              	100.00%
Bootstrap support for A8JHA6 as seed ortholog is 100%.
Bootstrap support for B4K7W2 as seed ortholog is 100%.

Group of orthologs #1558. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:30

A8JBU3              	100.00%		B4KNU5              	100.00%
Bootstrap support for A8JBU3 as seed ortholog is 100%.
Bootstrap support for B4KNU5 as seed ortholog is 78%.

Group of orthologs #1559. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:50

A8IKP1              	100.00%		B4L8F0              	100.00%
Bootstrap support for A8IKP1 as seed ortholog is 100%.
Bootstrap support for B4L8F0 as seed ortholog is 99%.

Group of orthologs #1560. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 D.mojavensis:101

A8J0E8              	100.00%		B4L1C6              	100.00%
Bootstrap support for A8J0E8 as seed ortholog is 100%.
Bootstrap support for B4L1C6 as seed ortholog is 100%.

Group of orthologs #1561. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 D.mojavensis:100

A8HVW4              	100.00%		B4KH74              	100.00%
                    	       		B4K4M9              	58.59%
                    	       		B4K4M8              	54.43%
                    	       		B4K4M6              	54.02%
                    	       		B4K4M7              	50.83%
Bootstrap support for A8HVW4 as seed ortholog is 66%.
Alternative seed ortholog is A8IKB4 (24 bits away from this cluster)
Bootstrap support for B4KH74 as seed ortholog is 100%.

Group of orthologs #1562. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:100

A8JHA9              	100.00%		B4KNS2              	100.00%
A8IYH1              	34.90%		B4KYZ8              	38.41%
Bootstrap support for A8JHA9 as seed ortholog is 100%.
Bootstrap support for B4KNS2 as seed ortholog is 100%.

Group of orthologs #1563. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:100

A8JB57              	100.00%		B4KJD7              	100.00%
A8JB90              	58.33%		
Bootstrap support for A8JB57 as seed ortholog is 100%.
Bootstrap support for B4KJD7 as seed ortholog is 100%.

Group of orthologs #1564. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:100

A8JIF1              	100.00%		B4L5M1              	100.00%
                    	       		B4KD86              	32.53%
Bootstrap support for A8JIF1 as seed ortholog is 100%.
Bootstrap support for B4L5M1 as seed ortholog is 100%.

Group of orthologs #1565. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:100

A8I311              	100.00%		B4K6W1              	100.00%
Bootstrap support for A8I311 as seed ortholog is 100%.
Bootstrap support for B4K6W1 as seed ortholog is 100%.

Group of orthologs #1566. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 D.mojavensis:100

A8IK66              	100.00%		B4KW54              	100.00%
Bootstrap support for A8IK66 as seed ortholog is 100%.
Bootstrap support for B4KW54 as seed ortholog is 100%.

Group of orthologs #1567. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 D.mojavensis:100

A8IUQ1              	100.00%		B4KYE2              	100.00%
Bootstrap support for A8IUQ1 as seed ortholog is 37%.
Alternative seed ortholog is A8JFG4 (9 bits away from this cluster)
Bootstrap support for B4KYE2 as seed ortholog is 100%.

Group of orthologs #1568. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:25

A8J1X1              	100.00%		B4L545              	100.00%
Bootstrap support for A8J1X1 as seed ortholog is 98%.
Bootstrap support for B4L545 as seed ortholog is 78%.

Group of orthologs #1569. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:30

A8ITX5              	100.00%		B4KKB1              	100.00%
A8IFC2              	44.61%		B4KK66              	20.84%
                    	       		B4KKB0              	19.04%
                    	       		B4KIH1              	8.42%
Bootstrap support for A8ITX5 as seed ortholog is 100%.
Bootstrap support for B4KKB1 as seed ortholog is 83%.

Group of orthologs #1570. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 D.mojavensis:99

A8JCU2              	100.00%		B4KSD4              	100.00%
A8IW07              	12.91%		
Bootstrap support for A8JCU2 as seed ortholog is 88%.
Bootstrap support for B4KSD4 as seed ortholog is 100%.

Group of orthologs #1571. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

A8I3E4              	100.00%		B4KEQ0              	100.00%
Bootstrap support for A8I3E4 as seed ortholog is 100%.
Bootstrap support for B4KEQ0 as seed ortholog is 100%.

Group of orthologs #1572. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

A8IPU0              	100.00%		B4K8Y8              	100.00%
Bootstrap support for A8IPU0 as seed ortholog is 100%.
Bootstrap support for B4K8Y8 as seed ortholog is 100%.

Group of orthologs #1573. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

A8IXQ8              	100.00%		B4KHE5              	100.00%
Bootstrap support for A8IXQ8 as seed ortholog is 100%.
Bootstrap support for B4KHE5 as seed ortholog is 100%.

Group of orthologs #1574. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

A8J3G2              	100.00%		B4KEW2              	100.00%
Bootstrap support for A8J3G2 as seed ortholog is 100%.
Bootstrap support for B4KEW2 as seed ortholog is 100%.

Group of orthologs #1575. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 D.mojavensis:31

A8J216              	100.00%		B4KJL4              	100.00%
Bootstrap support for A8J216 as seed ortholog is 67%.
Alternative seed ortholog is A8IHP9 (14 bits away from this cluster)
Bootstrap support for B4KJL4 as seed ortholog is 83%.

Group of orthologs #1576. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

A8I3K3              	100.00%		B4L0R4              	100.00%
Bootstrap support for A8I3K3 as seed ortholog is 100%.
Bootstrap support for B4L0R4 as seed ortholog is 100%.

Group of orthologs #1577. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

A8JA86              	100.00%		B4KN87              	100.00%
Bootstrap support for A8JA86 as seed ortholog is 100%.
Bootstrap support for B4KN87 as seed ortholog is 100%.

Group of orthologs #1578. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

Q8GUQ9              	100.00%		B4KLV0              	100.00%
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.
Bootstrap support for B4KLV0 as seed ortholog is 100%.

Group of orthologs #1579. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 D.mojavensis:99

Q8L439              	100.00%		B4KT00              	100.00%
Bootstrap support for Q8L439 as seed ortholog is 100%.
Bootstrap support for B4KT00 as seed ortholog is 100%.

Group of orthologs #1580. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 D.mojavensis:99

A8JF68              	100.00%		B4KZ15              	100.00%
Bootstrap support for A8JF68 as seed ortholog is 66%.
Alternative seed ortholog is A8I318 (8 bits away from this cluster)
Bootstrap support for B4KZ15 as seed ortholog is 100%.

Group of orthologs #1581. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:98

A8J795              	100.00%		B4KGT8              	100.00%
                    	       		B4KIR7              	7.89%
                    	       		B4KIS1              	7.37%
                    	       		B4KGI9              	5.26%
                    	       		B4KIR8              	5.00%
Bootstrap support for A8J795 as seed ortholog is 100%.
Bootstrap support for B4KGT8 as seed ortholog is 100%.

Group of orthologs #1582. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 D.mojavensis:45

A8IDT8              	100.00%		B4L2T2              	100.00%
                    	       		B4L604              	36.81%
                    	       		B4KFD9              	33.62%
Bootstrap support for A8IDT8 as seed ortholog is 80%.
Bootstrap support for B4L2T2 as seed ortholog is 74%.
Alternative seed ortholog is B4KJW4 (45 bits away from this cluster)

Group of orthologs #1583. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:98

A8J2G7              	100.00%		B4K9T4              	100.00%
Bootstrap support for A8J2G7 as seed ortholog is 100%.
Bootstrap support for B4K9T4 as seed ortholog is 100%.

Group of orthologs #1584. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:98

A8J7Q4              	100.00%		B4K8F4              	100.00%
Bootstrap support for A8J7Q4 as seed ortholog is 100%.
Bootstrap support for B4K8F4 as seed ortholog is 100%.

Group of orthologs #1585. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:98

A8JBC2              	100.00%		B4K546              	100.00%
Bootstrap support for A8JBC2 as seed ortholog is 100%.
Bootstrap support for B4K546 as seed ortholog is 100%.

Group of orthologs #1586. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:98

A8INQ8              	100.00%		B4KMY9              	100.00%
Bootstrap support for A8INQ8 as seed ortholog is 100%.
Bootstrap support for B4KMY9 as seed ortholog is 100%.

Group of orthologs #1587. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 D.mojavensis:98

A8J329              	100.00%		B4L973              	100.00%
Bootstrap support for A8J329 as seed ortholog is 100%.
Bootstrap support for B4L973 as seed ortholog is 100%.

Group of orthologs #1588. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 D.mojavensis:32

A8J8M1              	100.00%		B4KPW6              	100.00%
A8JGJ0              	45.98%		B4KQX9              	39.23%
                    	       		B4L169              	14.35%
Bootstrap support for A8J8M1 as seed ortholog is 69%.
Alternative seed ortholog is A8IZ56 (25 bits away from this cluster)
Bootstrap support for B4KPW6 as seed ortholog is 79%.

Group of orthologs #1589. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:38

A8IW99              	100.00%		B4KIT3              	100.00%
                    	       		B4KYZ7              	13.72%
                    	       		B4L5Z2              	10.82%
Bootstrap support for A8IW99 as seed ortholog is 100%.
Bootstrap support for B4KIT3 as seed ortholog is 89%.

Group of orthologs #1590. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8J082              	100.00%		B4K688              	100.00%
Bootstrap support for A8J082 as seed ortholog is 100%.
Bootstrap support for B4K688 as seed ortholog is 100%.

Group of orthologs #1591. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8I707              	100.00%		B4KTC8              	100.00%
Bootstrap support for A8I707 as seed ortholog is 100%.
Bootstrap support for B4KTC8 as seed ortholog is 100%.

Group of orthologs #1592. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8IMC5              	100.00%		B4L5S4              	100.00%
Bootstrap support for A8IMC5 as seed ortholog is 100%.
Bootstrap support for B4L5S4 as seed ortholog is 100%.

Group of orthologs #1593. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8J7N6              	100.00%		B4KSX9              	100.00%
Bootstrap support for A8J7N6 as seed ortholog is 100%.
Bootstrap support for B4KSX9 as seed ortholog is 100%.

Group of orthologs #1594. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 D.mojavensis:97

A8J8L3              	100.00%		B4KSK1              	100.00%
Bootstrap support for A8J8L3 as seed ortholog is 96%.
Bootstrap support for B4KSK1 as seed ortholog is 100%.

Group of orthologs #1595. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8J664              	100.00%		B4KYE8              	100.00%
Bootstrap support for A8J664 as seed ortholog is 100%.
Bootstrap support for B4KYE8 as seed ortholog is 100%.

Group of orthologs #1596. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8J7C1              	100.00%		B4KXY1              	100.00%
Bootstrap support for A8J7C1 as seed ortholog is 100%.
Bootstrap support for B4KXY1 as seed ortholog is 100%.

Group of orthologs #1597. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 D.mojavensis:97

A8JD88              	100.00%		B4L6D1              	100.00%
Bootstrap support for A8JD88 as seed ortholog is 100%.
Bootstrap support for B4L6D1 as seed ortholog is 100%.

Group of orthologs #1598. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:96

A8J502              	100.00%		B4KWE7              	100.00%
A8IFX8              	61.58%		
A8I424              	48.07%		
A8IZ39              	29.12%		
A8IUJ9              	9.82%		
A8JE46              	8.42%		
A8I041              	7.19%		
A8IJ64              	5.26%		
Bootstrap support for A8J502 as seed ortholog is 100%.
Bootstrap support for B4KWE7 as seed ortholog is 100%.

Group of orthologs #1599. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:96

A8HMW6              	100.00%		B4KB48              	100.00%
A8HMW8              	27.61%		
Bootstrap support for A8HMW6 as seed ortholog is 100%.
Bootstrap support for B4KB48 as seed ortholog is 100%.

Group of orthologs #1600. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:96

A8IDN1              	100.00%		B4KDX2              	100.00%
                    	       		B4L0J6              	100.00%
Bootstrap support for A8IDN1 as seed ortholog is 99%.
Bootstrap support for B4KDX2 as seed ortholog is 100%.
Bootstrap support for B4L0J6 as seed ortholog is 100%.

Group of orthologs #1601. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:96

A8IXF1              	100.00%		B4L0X0              	100.00%
A8I3V3              	67.98%		
Bootstrap support for A8IXF1 as seed ortholog is 100%.
Bootstrap support for B4L0X0 as seed ortholog is 100%.

Group of orthologs #1602. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:96

A8J028              	100.00%		B4L4T3              	100.00%
                    	       		B4K672              	72.97%
Bootstrap support for A8J028 as seed ortholog is 100%.
Bootstrap support for B4L4T3 as seed ortholog is 100%.

Group of orthologs #1603. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:56

A8J5R2              	100.00%		B4KC18              	100.00%
Bootstrap support for A8J5R2 as seed ortholog is 100%.
Bootstrap support for B4KC18 as seed ortholog is 99%.

Group of orthologs #1604. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 D.mojavensis:43

A8J778              	100.00%		B4L860              	100.00%
Bootstrap support for A8J778 as seed ortholog is 100%.
Bootstrap support for B4L860 as seed ortholog is 89%.

Group of orthologs #1605. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:1

A8I6C7              	100.00%		B4K4G5              	100.00%
                    	       		B4L435              	67.61%
Bootstrap support for A8I6C7 as seed ortholog is 100%.
Bootstrap support for B4K4G5 as seed ortholog is 49%.
Alternative seed ortholog is B4KB41 (1 bits away from this cluster)

Group of orthologs #1606. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:95

A8IR12              	100.00%		B4KUQ7              	100.00%
                    	       		B4L4E2              	18.70%
Bootstrap support for A8IR12 as seed ortholog is 100%.
Bootstrap support for B4KUQ7 as seed ortholog is 100%.

Group of orthologs #1607. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 D.mojavensis:95

A8IU47              	100.00%		B4K9Y7              	100.00%
Bootstrap support for A8IU47 as seed ortholog is 92%.
Bootstrap support for B4K9Y7 as seed ortholog is 100%.

Group of orthologs #1608. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:95

A8IIF8              	100.00%		B4KQC1              	100.00%
Bootstrap support for A8IIF8 as seed ortholog is 100%.
Bootstrap support for B4KQC1 as seed ortholog is 100%.

Group of orthologs #1609. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:95

A8HTE8              	100.00%		B4L0B4              	100.00%
Bootstrap support for A8HTE8 as seed ortholog is 100%.
Bootstrap support for B4L0B4 as seed ortholog is 100%.

Group of orthologs #1610. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:95

A8ITW3              	100.00%		B4KNJ3              	100.00%
Bootstrap support for A8ITW3 as seed ortholog is 100%.
Bootstrap support for B4KNJ3 as seed ortholog is 100%.

Group of orthologs #1611. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 D.mojavensis:95

A8JIK1              	100.00%		B4K8E7              	100.00%
Bootstrap support for A8JIK1 as seed ortholog is 74%.
Alternative seed ortholog is A8JBQ1 (21 bits away from this cluster)
Bootstrap support for B4K8E7 as seed ortholog is 100%.

Group of orthologs #1612. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 D.mojavensis:30

A8IZX6              	100.00%		B4L676              	100.00%
Bootstrap support for A8IZX6 as seed ortholog is 100%.
Bootstrap support for B4L676 as seed ortholog is 82%.

Group of orthologs #1613. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 D.mojavensis:12

A8JHZ0              	100.00%		B4KRR6              	100.00%
A8J6B3              	49.41%		
A8ITK7              	10.35%		
A8J9K7              	7.21%		
A8IUP6              	7.08%		
A8I4F2              	6.82%		
A8JB93              	6.42%		
Bootstrap support for A8JHZ0 as seed ortholog is 80%.
Bootstrap support for B4KRR6 as seed ortholog is 62%.
Alternative seed ortholog is B4KIW9 (12 bits away from this cluster)

Group of orthologs #1614. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 D.mojavensis:94

A8JFE2              	100.00%		B4K626              	100.00%
A8JFE3              	51.26%		
Bootstrap support for A8JFE2 as seed ortholog is 100%.
Bootstrap support for B4K626 as seed ortholog is 100%.

Group of orthologs #1615. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 D.mojavensis:94

A8I1P7              	100.00%		B4KUD7              	100.00%
Bootstrap support for A8I1P7 as seed ortholog is 100%.
Bootstrap support for B4KUD7 as seed ortholog is 100%.

Group of orthologs #1616. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 D.mojavensis:94

A8IIP4              	100.00%		B4KSU0              	100.00%
Bootstrap support for A8IIP4 as seed ortholog is 100%.
Bootstrap support for B4KSU0 as seed ortholog is 100%.

Group of orthologs #1617. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 D.mojavensis:94

A8JB60              	100.00%		B4KJQ2              	100.00%
Bootstrap support for A8JB60 as seed ortholog is 100%.
Bootstrap support for B4KJQ2 as seed ortholog is 100%.

Group of orthologs #1618. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 D.mojavensis:94

A8J807              	100.00%		B4KS02              	100.00%
Bootstrap support for A8J807 as seed ortholog is 100%.
Bootstrap support for B4KS02 as seed ortholog is 100%.

Group of orthologs #1619. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 D.mojavensis:93

Q8HTL2              	100.00%		B4L178              	100.00%
A8IU28              	22.88%		
Bootstrap support for Q8HTL2 as seed ortholog is 100%.
Bootstrap support for B4L178 as seed ortholog is 100%.

Group of orthologs #1620. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 D.mojavensis:93

A8J3U9              	100.00%		B4K5V4              	100.00%
Bootstrap support for A8J3U9 as seed ortholog is 100%.
Bootstrap support for B4K5V4 as seed ortholog is 100%.

Group of orthologs #1621. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 D.mojavensis:43

A8J6H4              	100.00%		B4KFM6              	100.00%
Bootstrap support for A8J6H4 as seed ortholog is 100%.
Bootstrap support for B4KFM6 as seed ortholog is 96%.

Group of orthologs #1622. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 D.mojavensis:93

A8JFH5              	100.00%		B4L991              	100.00%
Bootstrap support for A8JFH5 as seed ortholog is 100%.
Bootstrap support for B4L991 as seed ortholog is 100%.

Group of orthologs #1623. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 D.mojavensis:28

A8J4Z8              	100.00%		B4KIX4              	100.00%
                    	       		B4K9Q3              	8.30%
                    	       		B4KZ41              	7.89%
                    	       		B4L3A9              	6.68%
                    	       		B4L2R4              	5.67%
Bootstrap support for A8J4Z8 as seed ortholog is 100%.
Bootstrap support for B4KIX4 as seed ortholog is 75%.

Group of orthologs #1624. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 D.mojavensis:92

A8I0P8              	100.00%		B4L1X4              	100.00%
Bootstrap support for A8I0P8 as seed ortholog is 100%.
Bootstrap support for B4L1X4 as seed ortholog is 100%.

Group of orthologs #1625. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 D.mojavensis:92

A8IZN8              	100.00%		B4L6C5              	100.00%
Bootstrap support for A8IZN8 as seed ortholog is 100%.
Bootstrap support for B4L6C5 as seed ortholog is 100%.

Group of orthologs #1626. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:32

A8IT00              	100.00%		B4KCF2              	100.00%
A8IT01              	89.31%		B4K4I8              	9.21%
                    	       		B4K4I9              	6.33%
                    	       		B4K4I7              	5.18%
Bootstrap support for A8IT00 as seed ortholog is 100%.
Bootstrap support for B4KCF2 as seed ortholog is 82%.

Group of orthologs #1627. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8HWZ1              	100.00%		B4KLQ0              	100.00%
Bootstrap support for A8HWZ1 as seed ortholog is 100%.
Bootstrap support for B4KLQ0 as seed ortholog is 100%.

Group of orthologs #1628. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8J0J6              	100.00%		B4K5L7              	100.00%
Bootstrap support for A8J0J6 as seed ortholog is 100%.
Bootstrap support for B4K5L7 as seed ortholog is 100%.

Group of orthologs #1629. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8ISI4              	100.00%		B4KCG8              	100.00%
Bootstrap support for A8ISI4 as seed ortholog is 100%.
Bootstrap support for B4KCG8 as seed ortholog is 100%.

Group of orthologs #1630. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8J1T2              	100.00%		B4KIQ2              	100.00%
Bootstrap support for A8J1T2 as seed ortholog is 100%.
Bootstrap support for B4KIQ2 as seed ortholog is 100%.

Group of orthologs #1631. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8J4G2              	100.00%		B4KJS3              	100.00%
Bootstrap support for A8J4G2 as seed ortholog is 100%.
Bootstrap support for B4KJS3 as seed ortholog is 100%.

Group of orthologs #1632. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8J0Q1              	100.00%		B4KR84              	100.00%
Bootstrap support for A8J0Q1 as seed ortholog is 100%.
Bootstrap support for B4KR84 as seed ortholog is 100%.

Group of orthologs #1633. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8J0Q9              	100.00%		B4KXU9              	100.00%
Bootstrap support for A8J0Q9 as seed ortholog is 100%.
Bootstrap support for B4KXU9 as seed ortholog is 100%.

Group of orthologs #1634. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8IWL1              	100.00%		B4L1W7              	100.00%
Bootstrap support for A8IWL1 as seed ortholog is 100%.
Bootstrap support for B4L1W7 as seed ortholog is 100%.

Group of orthologs #1635. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 D.mojavensis:91

A8JA11              	100.00%		B4L6Z8              	100.00%
Bootstrap support for A8JA11 as seed ortholog is 91%.
Bootstrap support for B4L6Z8 as seed ortholog is 100%.

Group of orthologs #1636. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 D.mojavensis:91

A8JG77              	100.00%		B4L6D3              	100.00%
Bootstrap support for A8JG77 as seed ortholog is 100%.
Bootstrap support for B4L6D3 as seed ortholog is 100%.

Group of orthologs #1637. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 D.mojavensis:43

A8IXR0              	100.00%		B4KN36              	100.00%
A8IXR2              	22.67%		B4K4H1              	12.31%
Bootstrap support for A8IXR0 as seed ortholog is 88%.
Bootstrap support for B4KN36 as seed ortholog is 96%.

Group of orthologs #1638. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:90

A8I788              	100.00%		B4K5A2              	100.00%
Bootstrap support for A8I788 as seed ortholog is 100%.
Bootstrap support for B4K5A2 as seed ortholog is 100%.

Group of orthologs #1639. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:90

A8IJY1              	100.00%		B4KC63              	100.00%
Bootstrap support for A8IJY1 as seed ortholog is 100%.
Bootstrap support for B4KC63 as seed ortholog is 100%.

Group of orthologs #1640. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:90

A8J1L3              	100.00%		B4KET1              	100.00%
Bootstrap support for A8J1L3 as seed ortholog is 100%.
Bootstrap support for B4KET1 as seed ortholog is 100%.

Group of orthologs #1641. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:90

A8IMY7              	100.00%		B4KUP5              	100.00%
Bootstrap support for A8IMY7 as seed ortholog is 100%.
Bootstrap support for B4KUP5 as seed ortholog is 100%.

Group of orthologs #1642. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 D.mojavensis:90

A8J8A6              	100.00%		B4KQ85              	100.00%
Bootstrap support for A8J8A6 as seed ortholog is 100%.
Bootstrap support for B4KQ85 as seed ortholog is 100%.

Group of orthologs #1643. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8J8F6              	100.00%		B4KSL7              	100.00%
                    	       		B4KSL8              	50.85%
                    	       		B4KSL9              	40.92%
Bootstrap support for A8J8F6 as seed ortholog is 100%.
Bootstrap support for B4KSL7 as seed ortholog is 100%.

Group of orthologs #1644. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8HRZ0              	100.00%		B4K7G8              	100.00%
Q39576              	43.67%		
Bootstrap support for A8HRZ0 as seed ortholog is 100%.
Bootstrap support for B4K7G8 as seed ortholog is 100%.

Group of orthologs #1645. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:2

A8IJL5              	100.00%		B4L204              	100.00%
A8IS91              	6.28%		
Bootstrap support for A8IJL5 as seed ortholog is 92%.
Bootstrap support for B4L204 as seed ortholog is 72%.
Alternative seed ortholog is B4KIQ9 (2 bits away from this cluster)

Group of orthologs #1646. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8J139              	100.00%		B4KVU6              	100.00%
A8J5J7              	16.10%		
Bootstrap support for A8J139 as seed ortholog is 100%.
Bootstrap support for B4KVU6 as seed ortholog is 100%.

Group of orthologs #1647. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8HQD3              	100.00%		B4KES6              	100.00%
Bootstrap support for A8HQD3 as seed ortholog is 100%.
Bootstrap support for B4KES6 as seed ortholog is 100%.

Group of orthologs #1648. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8J6B1              	100.00%		B4KC38              	100.00%
Bootstrap support for A8J6B1 as seed ortholog is 100%.
Bootstrap support for B4KC38 as seed ortholog is 100%.

Group of orthologs #1649. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:19

A2PZD3              	100.00%		B4L5E5              	100.00%
Bootstrap support for A2PZD3 as seed ortholog is 100%.
Bootstrap support for B4L5E5 as seed ortholog is 96%.

Group of orthologs #1650. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8JIE5              	100.00%		B4K990              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for B4K990 as seed ortholog is 100%.

Group of orthologs #1651. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8IJG5              	100.00%		B4L0W0              	100.00%
Bootstrap support for A8IJG5 as seed ortholog is 100%.
Bootstrap support for B4L0W0 as seed ortholog is 100%.

Group of orthologs #1652. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8IIF1              	100.00%		B4L868              	100.00%
Bootstrap support for A8IIF1 as seed ortholog is 100%.
Bootstrap support for B4L868 as seed ortholog is 100%.

Group of orthologs #1653. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 D.mojavensis:89

A8JH11              	100.00%		B4L6W7              	100.00%
Bootstrap support for A8JH11 as seed ortholog is 100%.
Bootstrap support for B4L6W7 as seed ortholog is 100%.

Group of orthologs #1654. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 D.mojavensis:88

A8HXE1              	100.00%		B4KNZ6              	100.00%
                    	       		B4KNZ9              	46.53%
Bootstrap support for A8HXE1 as seed ortholog is 100%.
Bootstrap support for B4KNZ6 as seed ortholog is 100%.

Group of orthologs #1655. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 D.mojavensis:88

A8IC32              	100.00%		B4KT38              	100.00%
Bootstrap support for A8IC32 as seed ortholog is 100%.
Bootstrap support for B4KT38 as seed ortholog is 100%.

Group of orthologs #1656. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 D.mojavensis:88

A8IQE3              	100.00%		B4KZ58              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for B4KZ58 as seed ortholog is 100%.

Group of orthologs #1657. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:88

A8JB48              	100.00%		B4KLG4              	100.00%
Bootstrap support for A8JB48 as seed ortholog is 99%.
Bootstrap support for B4KLG4 as seed ortholog is 100%.

Group of orthologs #1658. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 D.mojavensis:88

Q1ZZK2              	100.00%		B4KIL6              	100.00%
Bootstrap support for Q1ZZK2 as seed ortholog is 100%.
Bootstrap support for B4KIL6 as seed ortholog is 100%.

Group of orthologs #1659. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 D.mojavensis:9

A8I1I7              	100.00%		B4KXH3              	100.00%
                    	       		B4KXH7              	16.00%
                    	       		B4KTX4              	15.76%
                    	       		B4KXH5              	15.29%
                    	       		B4KTW8              	13.88%
                    	       		B4KTX1              	13.88%
                    	       		B4KFB8              	13.88%
                    	       		B4KTW9              	13.41%
                    	       		B4KNR9              	12.47%
                    	       		B4KPJ8              	12.24%
                    	       		B4KNR8              	11.76%
                    	       		B4KTX3              	11.53%
                    	       		B4KLE8              	11.53%
                    	       		B4KM23              	11.06%
                    	       		B4KPI1              	10.82%
                    	       		B4KTX0              	10.82%
                    	       		B4KK93              	10.59%
                    	       		B4K677              	10.35%
                    	       		B4KK94              	9.88%
                    	       		B4KSN7              	9.88%
                    	       		B4KTX7              	9.88%
                    	       		B4KVM1              	8.71%
                    	       		B4KK97              	8.00%
                    	       		B4K4Y2              	7.53%
                    	       		B4L0D7              	7.53%
                    	       		B4KTX5              	7.53%
                    	       		B4KK98              	6.82%
                    	       		B4KK96              	6.59%
                    	       		B4L754              	5.88%
                    	       		B4L1P3              	5.88%
                    	       		B4L1P2              	5.41%
                    	       		B4L3N4              	5.18%
Bootstrap support for A8I1I7 as seed ortholog is 100%.
Bootstrap support for B4KXH3 as seed ortholog is 84%.

Group of orthologs #1660. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 D.mojavensis:87

A8HVV8              	100.00%		B4KMT6              	100.00%
A8HVE3              	23.86%		
A8ICN5              	16.39%		
A8ITL9              	9.16%		
Bootstrap support for A8HVV8 as seed ortholog is 100%.
Bootstrap support for B4KMT6 as seed ortholog is 100%.

Group of orthologs #1661. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:87

A8J9Z5              	100.00%		B4KK11              	100.00%
A8JHR5              	24.44%		B4KK17              	24.89%
Bootstrap support for A8J9Z5 as seed ortholog is 56%.
Alternative seed ortholog is A8J930 (3 bits away from this cluster)
Bootstrap support for B4KK11 as seed ortholog is 100%.

Group of orthologs #1662. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 D.mojavensis:87

A8IVP3              	100.00%		B4L867              	100.00%
                    	       		B4KTY1              	51.21%
Bootstrap support for A8IVP3 as seed ortholog is 100%.
Bootstrap support for B4L867 as seed ortholog is 100%.

Group of orthologs #1663. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 D.mojavensis:87

A8HMG8              	100.00%		B4KE07              	100.00%
Bootstrap support for A8HMG8 as seed ortholog is 100%.
Bootstrap support for B4KE07 as seed ortholog is 100%.

Group of orthologs #1664. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 D.mojavensis:87

A8IZD0              	100.00%		B4KPK5              	100.00%
Bootstrap support for A8IZD0 as seed ortholog is 100%.
Bootstrap support for B4KPK5 as seed ortholog is 100%.

Group of orthologs #1665. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8JA31              	100.00%		B4KYQ3              	100.00%
                    	       		B4KYQ5              	47.81%
                    	       		B4KYQ2              	47.55%
                    	       		B4KYQ6              	47.29%
                    	       		B4KYQ4              	46.13%
                    	       		B4KYQ1              	35.05%
                    	       		B4KIC5              	20.88%
                    	       		B4KYR9              	20.49%
                    	       		B4KIC6              	19.85%
                    	       		B4KIC8              	18.56%
                    	       		B4KFQ6              	17.27%
                    	       		B4L3U6              	16.75%
                    	       		B4L1R5              	16.24%
                    	       		B4KZT7              	15.72%
                    	       		B4KFQ5              	15.21%
                    	       		B4KZT6              	15.21%
                    	       		B4KNF9              	15.08%
                    	       		B4KAN0              	13.66%
                    	       		B4KZT8              	13.53%
                    	       		B4KYQ0              	12.76%
                    	       		B4L1R6              	8.38%
                    	       		B4L4T6              	5.54%
Bootstrap support for A8JA31 as seed ortholog is 100%.
Bootstrap support for B4KYQ3 as seed ortholog is 100%.

Group of orthologs #1666. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:26

A8IYX0              	100.00%		B4K6N2              	100.00%
                    	       		B4KBY9              	100.00%
                    	       		B4KKR7              	21.37%
                    	       		B4KT78              	9.40%
Bootstrap support for A8IYX0 as seed ortholog is 100%.
Bootstrap support for B4K6N2 as seed ortholog is 94%.
Bootstrap support for B4KBY9 as seed ortholog is 94%.

Group of orthologs #1667. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8J0C2              	100.00%		B4L5W5              	100.00%
A8I8S8              	74.53%		
A8HV32              	28.36%		
A8IZF5              	12.88%		
Bootstrap support for A8J0C2 as seed ortholog is 100%.
Bootstrap support for B4L5W5 as seed ortholog is 100%.

Group of orthologs #1668. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 D.mojavensis:86

A8IZV7              	100.00%		B4KKL6              	100.00%
                    	       		B4KKL5              	65.26%
                    	       		B4KQQ9              	18.11%
Bootstrap support for A8IZV7 as seed ortholog is 66%.
Alternative seed ortholog is A8JCX6 (15 bits away from this cluster)
Bootstrap support for B4KKL6 as seed ortholog is 100%.

Group of orthologs #1669. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8HTU8              	100.00%		B4KB39              	100.00%
A8IYY9              	6.52%		
Bootstrap support for A8HTU8 as seed ortholog is 100%.
Bootstrap support for B4KB39 as seed ortholog is 100%.

Group of orthologs #1670. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:8

A8I7Q7              	100.00%		B4KZZ1              	100.00%
A8JH31              	22.96%		
Bootstrap support for A8I7Q7 as seed ortholog is 100%.
Bootstrap support for B4KZZ1 as seed ortholog is 64%.
Alternative seed ortholog is B4KP84 (8 bits away from this cluster)

Group of orthologs #1671. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:46

Q6IET4              	100.00%		B4KA26              	100.00%
                    	       		B4L146              	6.25%
Bootstrap support for Q6IET4 as seed ortholog is 100%.
Bootstrap support for B4KA26 as seed ortholog is 99%.

Group of orthologs #1672. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8INC7              	100.00%		B4KAH8              	100.00%
Bootstrap support for A8INC7 as seed ortholog is 100%.
Bootstrap support for B4KAH8 as seed ortholog is 100%.

Group of orthologs #1673. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8ITZ5              	100.00%		B4KR51              	100.00%
Bootstrap support for A8ITZ5 as seed ortholog is 100%.
Bootstrap support for B4KR51 as seed ortholog is 100%.

Group of orthologs #1674. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8J1Q3              	100.00%		B4KLX5              	100.00%
Bootstrap support for A8J1Q3 as seed ortholog is 100%.
Bootstrap support for B4KLX5 as seed ortholog is 100%.

Group of orthologs #1675. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

A8JF64              	100.00%		B4KPP8              	100.00%
Bootstrap support for A8JF64 as seed ortholog is 100%.
Bootstrap support for B4KPP8 as seed ortholog is 100%.

Group of orthologs #1676. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 D.mojavensis:86

Q66YD1              	100.00%		B4KT55              	100.00%
Bootstrap support for Q66YD1 as seed ortholog is 100%.
Bootstrap support for B4KT55 as seed ortholog is 100%.

Group of orthologs #1677. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:85

A8IGB8              	100.00%		B4K5G2              	100.00%
Bootstrap support for A8IGB8 as seed ortholog is 100%.
Bootstrap support for B4K5G2 as seed ortholog is 100%.

Group of orthologs #1678. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:23

A8I8E9              	100.00%		B4K895              	100.00%
Bootstrap support for A8I8E9 as seed ortholog is 100%.
Bootstrap support for B4K895 as seed ortholog is 51%.
Alternative seed ortholog is B4KNV7 (23 bits away from this cluster)

Group of orthologs #1679. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:85

A8IR66              	100.00%		B4KHF1              	100.00%
Bootstrap support for A8IR66 as seed ortholog is 100%.
Bootstrap support for B4KHF1 as seed ortholog is 100%.

Group of orthologs #1680. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:85

A8J601              	100.00%		B4KCS0              	100.00%
Bootstrap support for A8J601 as seed ortholog is 100%.
Bootstrap support for B4KCS0 as seed ortholog is 100%.

Group of orthologs #1681. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:85

A8J2P4              	100.00%		B4KKP1              	100.00%
Bootstrap support for A8J2P4 as seed ortholog is 100%.
Bootstrap support for B4KKP1 as seed ortholog is 100%.

Group of orthologs #1682. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:85

A8HRS8              	100.00%		B4L7Y5              	100.00%
Bootstrap support for A8HRS8 as seed ortholog is 100%.
Bootstrap support for B4L7Y5 as seed ortholog is 100%.

Group of orthologs #1683. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 D.mojavensis:85

A8JFK9              	100.00%		B4KZH2              	100.00%
Bootstrap support for A8JFK9 as seed ortholog is 100%.
Bootstrap support for B4KZH2 as seed ortholog is 100%.

Group of orthologs #1684. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8I528              	100.00%		B4KKL9              	100.00%
A8HPF4              	57.53%		B4KKM0              	36.93%
Bootstrap support for A8I528 as seed ortholog is 100%.
Bootstrap support for B4KKL9 as seed ortholog is 100%.

Group of orthologs #1685. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 D.mojavensis:84

A8JBB4              	100.00%		B4KQG2              	100.00%
A8JBE2              	50.28%		
A8JBA7              	47.74%		
Bootstrap support for A8JBB4 as seed ortholog is 92%.
Bootstrap support for B4KQG2 as seed ortholog is 100%.

Group of orthologs #1686. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:29

A8JGS4              	100.00%		B4KWC2              	100.00%
                    	       		B4KGV9              	15.56%
Bootstrap support for A8JGS4 as seed ortholog is 100%.
Bootstrap support for B4KWC2 as seed ortholog is 96%.

Group of orthologs #1687. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8HUH8              	100.00%		B4K8N2              	100.00%
Bootstrap support for A8HUH8 as seed ortholog is 100%.
Bootstrap support for B4K8N2 as seed ortholog is 100%.

Group of orthologs #1688. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 D.mojavensis:84

A8I211              	100.00%		B4KU64              	100.00%
Bootstrap support for A8I211 as seed ortholog is 80%.
Bootstrap support for B4KU64 as seed ortholog is 100%.

Group of orthologs #1689. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8HUV3              	100.00%		B4KXI9              	100.00%
Bootstrap support for A8HUV3 as seed ortholog is 100%.
Bootstrap support for B4KXI9 as seed ortholog is 100%.

Group of orthologs #1690. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8J7X4              	100.00%		B4K8N9              	100.00%
Bootstrap support for A8J7X4 as seed ortholog is 100%.
Bootstrap support for B4K8N9 as seed ortholog is 100%.

Group of orthologs #1691. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8J9C0              	100.00%		B4KCZ5              	100.00%
Bootstrap support for A8J9C0 as seed ortholog is 100%.
Bootstrap support for B4KCZ5 as seed ortholog is 100%.

Group of orthologs #1692. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8I930              	100.00%		B4L2I3              	100.00%
Bootstrap support for A8I930 as seed ortholog is 100%.
Bootstrap support for B4L2I3 as seed ortholog is 100%.

Group of orthologs #1693. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8HVZ9              	100.00%		B4L7I1              	100.00%
Bootstrap support for A8HVZ9 as seed ortholog is 100%.
Bootstrap support for B4L7I1 as seed ortholog is 100%.

Group of orthologs #1694. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8JFE1              	100.00%		B4KE71              	100.00%
Bootstrap support for A8JFE1 as seed ortholog is 100%.
Bootstrap support for B4KE71 as seed ortholog is 100%.

Group of orthologs #1695. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 D.mojavensis:84

A8IZY5              	100.00%		B4KT99              	100.00%
Bootstrap support for A8IZY5 as seed ortholog is 100%.
Bootstrap support for B4KT99 as seed ortholog is 100%.

Group of orthologs #1696. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 D.mojavensis:83

A8JF25              	100.00%		B4KP95              	100.00%
                    	       		B4KR08              	10.70%
Bootstrap support for A8JF25 as seed ortholog is 48%.
Alternative seed ortholog is A8I4T9 (2 bits away from this cluster)
Bootstrap support for B4KP95 as seed ortholog is 100%.

Group of orthologs #1697. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:83

A8I715              	100.00%		B4KQW3              	100.00%
Bootstrap support for A8I715 as seed ortholog is 100%.
Bootstrap support for B4KQW3 as seed ortholog is 100%.

Group of orthologs #1698. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:83

A8J7J8              	100.00%		B4KHD0              	100.00%
Bootstrap support for A8J7J8 as seed ortholog is 100%.
Bootstrap support for B4KHD0 as seed ortholog is 100%.

Group of orthologs #1699. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 D.mojavensis:83

A8JH74              	100.00%		B4KE66              	100.00%
Bootstrap support for A8JH74 as seed ortholog is 100%.
Bootstrap support for B4KE66 as seed ortholog is 100%.

Group of orthologs #1700. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 D.mojavensis:32

A8IZR5              	100.00%		B4KH18              	100.00%
                    	       		B4L7S7              	41.22%
                    	       		B4KVL5              	32.06%
                    	       		B4L7S8              	6.87%
                    	       		B4L8U0              	6.87%
Bootstrap support for A8IZR5 as seed ortholog is 38%.
Alternative seed ortholog is Q84XR8 (4 bits away from this cluster)
Bootstrap support for B4KH18 as seed ortholog is 97%.

Group of orthologs #1701. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 D.mojavensis:82

A8JCQ0              	100.00%		B4KT88              	100.00%
                    	       		B4KT90              	71.75%
                    	       		B4L1C7              	53.46%
                    	       		B4L8P6              	15.79%
Bootstrap support for A8JCQ0 as seed ortholog is 100%.
Bootstrap support for B4KT88 as seed ortholog is 100%.

Group of orthologs #1702. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 D.mojavensis:82

Q6UP29              	100.00%		B4L6W9              	100.00%
A8IS09              	12.16%		
Bootstrap support for Q6UP29 as seed ortholog is 100%.
Bootstrap support for B4L6W9 as seed ortholog is 100%.

Group of orthologs #1703. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 D.mojavensis:82

A8IJT8              	100.00%		B4K8G4              	100.00%
Bootstrap support for A8IJT8 as seed ortholog is 100%.
Bootstrap support for B4K8G4 as seed ortholog is 100%.

Group of orthologs #1704. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 D.mojavensis:82

A8JHX7              	100.00%		B4KV46              	100.00%
Bootstrap support for A8JHX7 as seed ortholog is 100%.
Bootstrap support for B4KV46 as seed ortholog is 100%.

Group of orthologs #1705. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 D.mojavensis:33

A8JII1              	100.00%		B4KZ72              	100.00%
Bootstrap support for A8JII1 as seed ortholog is 100%.
Bootstrap support for B4KZ72 as seed ortholog is 86%.

Group of orthologs #1706. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 D.mojavensis:81

A8IE17              	100.00%		B4KFH1              	100.00%
Bootstrap support for A8IE17 as seed ortholog is 100%.
Bootstrap support for B4KFH1 as seed ortholog is 100%.

Group of orthologs #1707. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 D.mojavensis:81

A8IES6              	100.00%		B4KJM9              	100.00%
Bootstrap support for A8IES6 as seed ortholog is 100%.
Bootstrap support for B4KJM9 as seed ortholog is 100%.

Group of orthologs #1708. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 D.mojavensis:29

A8JDG4              	100.00%		B4L5W0              	100.00%
Bootstrap support for A8JDG4 as seed ortholog is 100%.
Bootstrap support for B4L5W0 as seed ortholog is 76%.

Group of orthologs #1709. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:80

A8HM49              	100.00%		B4KAL4              	100.00%
                    	       		B4K775              	33.40%
                    	       		B4KG98              	14.76%
Bootstrap support for A8HM49 as seed ortholog is 100%.
Bootstrap support for B4KAL4 as seed ortholog is 100%.

Group of orthologs #1710. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:80

A8IYG3              	100.00%		B4KCB8              	100.00%
                    	       		B4K6K9              	11.44%
                    	       		B4K6K6              	9.57%
Bootstrap support for A8IYG3 as seed ortholog is 100%.
Bootstrap support for B4KCB8 as seed ortholog is 100%.

Group of orthologs #1711. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:80

A8J429              	100.00%		B4L0T4              	100.00%
                    	       		B4KU63              	14.78%
                    	       		B4KNP6              	10.01%
Bootstrap support for A8J429 as seed ortholog is 100%.
Bootstrap support for B4L0T4 as seed ortholog is 100%.

Group of orthologs #1712. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:80

A8JH71              	100.00%		B4KX05              	100.00%
A8I1K6              	15.69%		
A8I341              	14.42%		
Bootstrap support for A8JH71 as seed ortholog is 100%.
Bootstrap support for B4KX05 as seed ortholog is 100%.

Group of orthologs #1713. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:80

Q9ZTA7              	100.00%		B4K513              	100.00%
Bootstrap support for Q9ZTA7 as seed ortholog is 100%.
Bootstrap support for B4K513 as seed ortholog is 100%.

Group of orthologs #1714. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 D.mojavensis:80

A8IPG1              	100.00%		B4L815              	100.00%
Bootstrap support for A8IPG1 as seed ortholog is 100%.
Bootstrap support for B4L815 as seed ortholog is 100%.

Group of orthologs #1715. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:79

A8INU5              	100.00%		B4K532              	100.00%
Bootstrap support for A8INU5 as seed ortholog is 100%.
Bootstrap support for B4K532 as seed ortholog is 100%.

Group of orthologs #1716. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:79

A8I3I3              	100.00%		B4KW92              	100.00%
Bootstrap support for A8I3I3 as seed ortholog is 100%.
Bootstrap support for B4KW92 as seed ortholog is 100%.

Group of orthologs #1717. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:79

A8IY01              	100.00%		B4KMQ1              	100.00%
Bootstrap support for A8IY01 as seed ortholog is 100%.
Bootstrap support for B4KMQ1 as seed ortholog is 100%.

Group of orthologs #1718. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:79

A8IYY2              	100.00%		B4KMH6              	100.00%
Bootstrap support for A8IYY2 as seed ortholog is 100%.
Bootstrap support for B4KMH6 as seed ortholog is 100%.

Group of orthologs #1719. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 D.mojavensis:79

A8J0W3              	100.00%		B4KS41              	100.00%
Bootstrap support for A8J0W3 as seed ortholog is 100%.
Bootstrap support for B4KS41 as seed ortholog is 100%.

Group of orthologs #1720. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 D.mojavensis:36

A8J3A7              	100.00%		B4L7N2              	100.00%
A8J3A8              	54.24%		B4KJU2              	70.23%
Bootstrap support for A8J3A7 as seed ortholog is 89%.
Bootstrap support for B4L7N2 as seed ortholog is 99%.

Group of orthologs #1721. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:78

A8IUR6              	100.00%		B4L5E7              	100.00%
                    	       		B4L5F0              	11.05%
Bootstrap support for A8IUR6 as seed ortholog is 100%.
Bootstrap support for B4L5E7 as seed ortholog is 100%.

Group of orthologs #1722. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 D.mojavensis:78

A8HPV7              	100.00%		B4K8L6              	100.00%
Bootstrap support for A8HPV7 as seed ortholog is 93%.
Bootstrap support for B4K8L6 as seed ortholog is 100%.

Group of orthologs #1723. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:11

A8HSY0              	100.00%		B4KC51              	100.00%
Bootstrap support for A8HSY0 as seed ortholog is 100%.
Bootstrap support for B4KC51 as seed ortholog is 60%.
Alternative seed ortholog is B4KS31 (11 bits away from this cluster)

Group of orthologs #1724. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:78

A8I8P0              	100.00%		B4KC28              	100.00%
Bootstrap support for A8I8P0 as seed ortholog is 100%.
Bootstrap support for B4KC28 as seed ortholog is 100%.

Group of orthologs #1725. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:78

A8HT83              	100.00%		B4KKG1              	100.00%
Bootstrap support for A8HT83 as seed ortholog is 100%.
Bootstrap support for B4KKG1 as seed ortholog is 100%.

Group of orthologs #1726. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:78

A8I6D1              	100.00%		B4L4D9              	100.00%
Bootstrap support for A8I6D1 as seed ortholog is 100%.
Bootstrap support for B4L4D9 as seed ortholog is 100%.

Group of orthologs #1727. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 D.mojavensis:78

A8J5U5              	100.00%		B4KWL0              	100.00%
Bootstrap support for A8J5U5 as seed ortholog is 74%.
Alternative seed ortholog is A8HZG4 (15 bits away from this cluster)
Bootstrap support for B4KWL0 as seed ortholog is 100%.

Group of orthologs #1728. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:78

A8JG36              	100.00%		B4KZW8              	100.00%
Bootstrap support for A8JG36 as seed ortholog is 100%.
Bootstrap support for B4KZW8 as seed ortholog is 100%.

Group of orthologs #1729. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 D.mojavensis:78

Q6UP32              	100.00%		B4L2G8              	100.00%
Bootstrap support for Q6UP32 as seed ortholog is 100%.
Bootstrap support for B4L2G8 as seed ortholog is 100%.

Group of orthologs #1730. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:77

A8HSY2              	100.00%		B4KNI0              	100.00%
A8JFU8              	100.00%		B4K5V1              	100.00%
A8JFU7              	42.01%		B4KNI1              	24.92%
A8JD29              	18.67%		
A8IUA1              	13.64%		
Bootstrap support for A8HSY2 as seed ortholog is 100%.
Bootstrap support for A8JFU8 as seed ortholog is 100%.
Bootstrap support for B4KNI0 as seed ortholog is 100%.
Bootstrap support for B4K5V1 as seed ortholog is 100%.

Group of orthologs #1731. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:77

A8HMG1              	100.00%		B4KD11              	100.00%
A8HMF6              	56.87%		B4KD10              	38.77%
Bootstrap support for A8HMG1 as seed ortholog is 100%.
Bootstrap support for B4KD11 as seed ortholog is 100%.

Group of orthologs #1732. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:77

A8I5Q9              	100.00%		B4L343              	100.00%
                    	       		B4KTV2              	22.22%
                    	       		B4L303              	19.02%
Bootstrap support for A8I5Q9 as seed ortholog is 100%.
Bootstrap support for B4L343 as seed ortholog is 100%.

Group of orthologs #1733. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 D.mojavensis:13

A8JBY1              	100.00%		B4L755              	100.00%
                    	       		B4L753              	45.57%
                    	       		B4KCN3              	34.49%
Bootstrap support for A8JBY1 as seed ortholog is 84%.
Bootstrap support for B4L755 as seed ortholog is 76%.

Group of orthologs #1734. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:77

A8J2E3              	100.00%		B4KC89              	100.00%
Q7YKX3              	8.33%		
Bootstrap support for A8J2E3 as seed ortholog is 100%.
Bootstrap support for B4KC89 as seed ortholog is 100%.

Group of orthologs #1735. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:77

A8ITQ1              	100.00%		B4KB44              	100.00%
Bootstrap support for A8ITQ1 as seed ortholog is 100%.
Bootstrap support for B4KB44 as seed ortholog is 100%.

Group of orthologs #1736. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:77

A8IBL5              	100.00%		B4KZZ3              	100.00%
Bootstrap support for A8IBL5 as seed ortholog is 100%.
Bootstrap support for B4KZZ3 as seed ortholog is 100%.

Group of orthologs #1737. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 D.mojavensis:10

A8IYH3              	100.00%		B4L972              	100.00%
Bootstrap support for A8IYH3 as seed ortholog is 100%.
Bootstrap support for B4L972 as seed ortholog is 61%.
Alternative seed ortholog is B4KYA1 (10 bits away from this cluster)

Group of orthologs #1738. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:76

A8IAK6              	100.00%		B4KDZ1              	100.00%
A8J2A4              	10.64%		
A8JFV5              	8.98%		
Bootstrap support for A8IAK6 as seed ortholog is 100%.
Bootstrap support for B4KDZ1 as seed ortholog is 100%.

Group of orthologs #1739. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:76

A8ICC6              	100.00%		B4KDS5              	100.00%
Bootstrap support for A8ICC6 as seed ortholog is 100%.
Bootstrap support for B4KDS5 as seed ortholog is 100%.

Group of orthologs #1740. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:76

A8HT86              	100.00%		B4KLD6              	100.00%
Bootstrap support for A8HT86 as seed ortholog is 100%.
Bootstrap support for B4KLD6 as seed ortholog is 100%.

Group of orthologs #1741. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:76

A8HNL1              	100.00%		B4L0J5              	100.00%
Bootstrap support for A8HNL1 as seed ortholog is 100%.
Bootstrap support for B4L0J5 as seed ortholog is 100%.

Group of orthologs #1742. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 D.mojavensis:76

A8JGY0              	100.00%		B4KW56              	100.00%
Bootstrap support for A8JGY0 as seed ortholog is 100%.
Bootstrap support for B4KW56 as seed ortholog is 100%.

Group of orthologs #1743. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:4

A8IP68              	100.00%		B4L144              	100.00%
A8IYA8              	18.69%		
A8J3J2              	15.74%		
Bootstrap support for A8IP68 as seed ortholog is 100%.
Bootstrap support for B4L144 as seed ortholog is 71%.
Alternative seed ortholog is B4KVJ7 (4 bits away from this cluster)

Group of orthologs #1744. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:75

A8IML7              	100.00%		B4KTH6              	100.00%
                    	       		B4LAD4              	81.41%
Bootstrap support for A8IML7 as seed ortholog is 100%.
Bootstrap support for B4KTH6 as seed ortholog is 100%.

Group of orthologs #1745. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:5

A8IZX5              	100.00%		B4L4D0              	100.00%
A8HWJ9              	5.26%		
Bootstrap support for A8IZX5 as seed ortholog is 100%.
Bootstrap support for B4L4D0 as seed ortholog is 56%.
Alternative seed ortholog is B4K804 (5 bits away from this cluster)

Group of orthologs #1746. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:75

A8IX67              	100.00%		B4KSJ1              	100.00%
Bootstrap support for A8IX67 as seed ortholog is 100%.
Bootstrap support for B4KSJ1 as seed ortholog is 100%.

Group of orthologs #1747. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 D.mojavensis:75

Q27YU5              	100.00%		B4KFR8              	100.00%
Bootstrap support for Q27YU5 as seed ortholog is 100%.
Bootstrap support for B4KFR8 as seed ortholog is 100%.

Group of orthologs #1748. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 D.mojavensis:74

A8J5F0              	100.00%		B4L8W7              	100.00%
A8JIH7              	100.00%		B4KFW4              	5.09%
A8J101              	50.60%		
A8IQ37              	23.50%		
A8J0P8              	12.47%		
A8IHZ3              	11.88%		
Bootstrap support for A8J5F0 as seed ortholog is 76%.
Bootstrap support for A8JIH7 as seed ortholog is 76%.
Bootstrap support for B4L8W7 as seed ortholog is 100%.

Group of orthologs #1749. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:74

A8HNT1              	100.00%		B4KGC7              	100.00%
Bootstrap support for A8HNT1 as seed ortholog is 100%.
Bootstrap support for B4KGC7 as seed ortholog is 100%.

Group of orthologs #1750. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:74

A8HMU6              	100.00%		B4KI32              	100.00%
Bootstrap support for A8HMU6 as seed ortholog is 100%.
Bootstrap support for B4KI32 as seed ortholog is 100%.

Group of orthologs #1751. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:74

A8IZX7              	100.00%		B4KBR2              	100.00%
Bootstrap support for A8IZX7 as seed ortholog is 100%.
Bootstrap support for B4KBR2 as seed ortholog is 100%.

Group of orthologs #1752. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 D.mojavensis:74

A8IYR0              	100.00%		B4KFG5              	100.00%
Bootstrap support for A8IYR0 as seed ortholog is 100%.
Bootstrap support for B4KFG5 as seed ortholog is 100%.

Group of orthologs #1753. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:73

A8IUP0              	100.00%		B4KBQ6              	100.00%
                    	       		B4KBQ5              	29.10%
                    	       		B4KBQ7              	22.54%
                    	       		B4K592              	9.84%
Bootstrap support for A8IUP0 as seed ortholog is 100%.
Bootstrap support for B4KBQ6 as seed ortholog is 100%.

Group of orthologs #1754. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 D.mojavensis:73

A8IYP4              	100.00%		B4K9V0              	100.00%
Bootstrap support for A8IYP4 as seed ortholog is 72%.
Alternative seed ortholog is A8IW58 (17 bits away from this cluster)
Bootstrap support for B4K9V0 as seed ortholog is 100%.

Group of orthologs #1755. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:73

A8IDS5              	100.00%		B4KRC9              	100.00%
Bootstrap support for A8IDS5 as seed ortholog is 100%.
Bootstrap support for B4KRC9 as seed ortholog is 100%.

Group of orthologs #1756. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:73

A8J750              	100.00%		B4KIG9              	100.00%
Bootstrap support for A8J750 as seed ortholog is 100%.
Bootstrap support for B4KIG9 as seed ortholog is 100%.

Group of orthologs #1757. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:73

A8J6E6              	100.00%		B4KJM6              	100.00%
Bootstrap support for A8J6E6 as seed ortholog is 100%.
Bootstrap support for B4KJM6 as seed ortholog is 100%.

Group of orthologs #1758. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 D.mojavensis:73

A8IVU1              	100.00%		B4L1T3              	100.00%
Bootstrap support for A8IVU1 as seed ortholog is 100%.
Bootstrap support for B4L1T3 as seed ortholog is 100%.

Group of orthologs #1759. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 D.mojavensis:2

A8JBW8              	100.00%		B4K4S9              	100.00%
                    	       		B4K4T0              	71.33%
                    	       		B4KJ80              	55.47%
                    	       		B4K4T1              	39.61%
                    	       		B4KRU8              	35.17%
                    	       		B4K4S8              	33.79%
                    	       		B4KGL1              	33.50%
                    	       		B4KGK9              	31.43%
                    	       		B4KGL0              	30.44%
                    	       		B4KU87              	30.25%
                    	       		B4KRD5              	29.06%
                    	       		B4KGK8              	28.28%
                    	       		B4KRU9              	27.68%
                    	       		B4KP27              	27.09%
                    	       		B4KP26              	26.80%
                    	       		B4KQN0              	21.48%
                    	       		B4KQN1              	18.52%
                    	       		B4K7E6              	13.60%
                    	       		B4L257              	6.70%
Bootstrap support for A8JBW8 as seed ortholog is 51%.
Alternative seed ortholog is A8HQI9 (17 bits away from this cluster)
Bootstrap support for B4K4S9 as seed ortholog is 77%.

Group of orthologs #1760. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8HMJ9              	100.00%		B4L398              	100.00%
                    	       		B4L5T8              	28.62%
                    	       		B4L5T9              	17.06%
Bootstrap support for A8HMJ9 as seed ortholog is 100%.
Bootstrap support for B4L398 as seed ortholog is 100%.

Group of orthologs #1761. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8HUP9              	100.00%		B4KGV3              	100.00%
                    	       		B4KXV7              	26.82%
Bootstrap support for A8HUP9 as seed ortholog is 100%.
Bootstrap support for B4KGV3 as seed ortholog is 100%.

Group of orthologs #1762. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8ISJ7              	100.00%		B4KNI5              	100.00%
                    	       		B4KE65              	43.55%
Bootstrap support for A8ISJ7 as seed ortholog is 100%.
Bootstrap support for B4KNI5 as seed ortholog is 100%.

Group of orthologs #1763. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:23

A8I8T9              	100.00%		B4KJZ3              	100.00%
Bootstrap support for A8I8T9 as seed ortholog is 100%.
Bootstrap support for B4KJZ3 as seed ortholog is 76%.

Group of orthologs #1764. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8J1I2              	100.00%		B4K7T7              	100.00%
Bootstrap support for A8J1I2 as seed ortholog is 100%.
Bootstrap support for B4K7T7 as seed ortholog is 100%.

Group of orthologs #1765. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8J673              	100.00%		B4KC39              	100.00%
Bootstrap support for A8J673 as seed ortholog is 100%.
Bootstrap support for B4KC39 as seed ortholog is 100%.

Group of orthologs #1766. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8JFJ5              	100.00%		B4K4I5              	100.00%
Bootstrap support for A8JFJ5 as seed ortholog is 100%.
Bootstrap support for B4K4I5 as seed ortholog is 100%.

Group of orthologs #1767. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8IZA6              	100.00%		B4KN06              	100.00%
Bootstrap support for A8IZA6 as seed ortholog is 100%.
Bootstrap support for B4KN06 as seed ortholog is 100%.

Group of orthologs #1768. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8HMQ9              	100.00%		B4L9A1              	100.00%
Bootstrap support for A8HMQ9 as seed ortholog is 100%.
Bootstrap support for B4L9A1 as seed ortholog is 100%.

Group of orthologs #1769. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8IYJ5              	100.00%		B4KSU3              	100.00%
Bootstrap support for A8IYJ5 as seed ortholog is 100%.
Bootstrap support for B4KSU3 as seed ortholog is 100%.

Group of orthologs #1770. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8J3E1              	100.00%		B4KXE6              	100.00%
Bootstrap support for A8J3E1 as seed ortholog is 100%.
Bootstrap support for B4KXE6 as seed ortholog is 100%.

Group of orthologs #1771. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 D.mojavensis:72

A8IUL9              	100.00%		B4L8M1              	100.00%
Bootstrap support for A8IUL9 as seed ortholog is 100%.
Bootstrap support for B4L8M1 as seed ortholog is 100%.

Group of orthologs #1772. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:71

A8HSU4              	100.00%		B4K7K0              	100.00%
Bootstrap support for A8HSU4 as seed ortholog is 100%.
Bootstrap support for B4K7K0 as seed ortholog is 100%.

Group of orthologs #1773. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:71

A8IR64              	100.00%		B4L9I0              	100.00%
Bootstrap support for A8IR64 as seed ortholog is 100%.
Bootstrap support for B4L9I0 as seed ortholog is 100%.

Group of orthologs #1774. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:71

Q6UP31              	100.00%		B4KL35              	100.00%
Bootstrap support for Q6UP31 as seed ortholog is 100%.
Bootstrap support for B4KL35 as seed ortholog is 100%.

Group of orthologs #1775. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 D.mojavensis:71

A8IW91              	100.00%		B4L908              	100.00%
Bootstrap support for A8IW91 as seed ortholog is 100%.
Bootstrap support for B4L908 as seed ortholog is 100%.

Group of orthologs #1776. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:70

A8IJP9              	100.00%		B4KCL7              	100.00%
Bootstrap support for A8IJP9 as seed ortholog is 100%.
Bootstrap support for B4KCL7 as seed ortholog is 100%.

Group of orthologs #1777. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:70

A8HMD5              	100.00%		B4KZI8              	100.00%
Bootstrap support for A8HMD5 as seed ortholog is 100%.
Bootstrap support for B4KZI8 as seed ortholog is 100%.

Group of orthologs #1778. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:70

A8ITN6              	100.00%		B4KW23              	100.00%
Bootstrap support for A8ITN6 as seed ortholog is 100%.
Bootstrap support for B4KW23 as seed ortholog is 100%.

Group of orthologs #1779. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 D.mojavensis:70

Q94KS3              	100.00%		B4KGG2              	100.00%
Bootstrap support for Q94KS3 as seed ortholog is 100%.
Bootstrap support for B4KGG2 as seed ortholog is 100%.

Group of orthologs #1780. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8HUC9              	100.00%		B4KJV1              	100.00%
A8JDX3              	100.00%		B4KM86              	100.00%
                    	       		B4KM87              	66.85%
                    	       		B4KM85              	52.29%
                    	       		B4L947              	51.46%
                    	       		B4L948              	50.66%
                    	       		B4KM88              	49.87%
                    	       		B4KTI4              	37.74%
                    	       		B4KM84              	36.66%
                    	       		B4KMA1              	35.85%
                    	       		B4KU54              	26.95%
                    	       		B4KAY7              	21.83%
                    	       		B4KAY8              	21.56%
                    	       		B4KAY6              	20.75%
                    	       		B4K5W6              	19.14%
                    	       		B0YQ66              	19.14%
                    	       		B4KLL5              	16.98%
                    	       		B4KAY4              	15.90%
                    	       		B4K5W5              	14.29%
Bootstrap support for A8HUC9 as seed ortholog is 100%.
Bootstrap support for A8JDX3 as seed ortholog is 100%.
Bootstrap support for B4KJV1 as seed ortholog is 100%.
Bootstrap support for B4KM86 as seed ortholog is 100%.

Group of orthologs #1781. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8J8J2              	100.00%		B4KQT2              	100.00%
                    	       		B4KQT1              	14.35%
                    	       		B4KFF0              	9.71%
                    	       		B4K5G4              	9.45%
                    	       		B4KWW7              	8.82%
                    	       		B4KKA9              	7.13%
                    	       		B4KEG2              	7.13%
                    	       		B4KJ92              	7.04%
                    	       		B4KFI4              	6.86%
                    	       		B4KWW0              	5.61%
                    	       		B4KB36              	5.53%
                    	       		B4KIW0              	5.17%
Bootstrap support for A8J8J2 as seed ortholog is 100%.
Bootstrap support for B4KQT2 as seed ortholog is 100%.

Group of orthologs #1782. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 D.mojavensis:13

A8J8L2              	100.00%		B4KEE5              	100.00%
A8J8L1              	11.45%		B4L5F3              	5.56%
Bootstrap support for A8J8L2 as seed ortholog is 60%.
Alternative seed ortholog is A8HUL5 (6 bits away from this cluster)
Bootstrap support for B4KEE5 as seed ortholog is 74%.
Alternative seed ortholog is B4KW66 (13 bits away from this cluster)

Group of orthologs #1783. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8J7Y1              	100.00%		B4KS03              	100.00%
                    	       		B4KTS6              	100.00%
                    	       		B4KAN7              	17.58%
Bootstrap support for A8J7Y1 as seed ortholog is 100%.
Bootstrap support for B4KS03 as seed ortholog is 100%.
Bootstrap support for B4KTS6 as seed ortholog is 100%.

Group of orthologs #1784. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 D.mojavensis:17

Q84XS2              	100.00%		B4KRL1              	100.00%
A8HP58              	11.74%		
A8J0Q8              	7.83%		
Bootstrap support for Q84XS2 as seed ortholog is 88%.
Bootstrap support for B4KRL1 as seed ortholog is 86%.

Group of orthologs #1785. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8INX4              	100.00%		B4K5S4              	100.00%
Bootstrap support for A8INX4 as seed ortholog is 100%.
Bootstrap support for B4K5S4 as seed ortholog is 100%.

Group of orthologs #1786. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8IGK2              	100.00%		B4KEE0              	100.00%
Bootstrap support for A8IGK2 as seed ortholog is 100%.
Bootstrap support for B4KEE0 as seed ortholog is 100%.

Group of orthologs #1787. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8IXG3              	100.00%		B4KIE3              	100.00%
Bootstrap support for A8IXG3 as seed ortholog is 100%.
Bootstrap support for B4KIE3 as seed ortholog is 100%.

Group of orthologs #1788. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8J8S8              	100.00%		B4KCJ5              	100.00%
Bootstrap support for A8J8S8 as seed ortholog is 100%.
Bootstrap support for B4KCJ5 as seed ortholog is 100%.

Group of orthologs #1789. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8J817              	100.00%		B4KF29              	100.00%
Bootstrap support for A8J817 as seed ortholog is 100%.
Bootstrap support for B4KF29 as seed ortholog is 100%.

Group of orthologs #1790. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8IZE0              	100.00%		B4KPR5              	100.00%
Bootstrap support for A8IZE0 as seed ortholog is 100%.
Bootstrap support for B4KPR5 as seed ortholog is 100%.

Group of orthologs #1791. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8JCJ1              	100.00%		B4KVL9              	100.00%
Bootstrap support for A8JCJ1 as seed ortholog is 100%.
Bootstrap support for B4KVL9 as seed ortholog is 100%.

Group of orthologs #1792. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 D.mojavensis:69

A8JH64              	100.00%		B4KWQ6              	100.00%
Bootstrap support for A8JH64 as seed ortholog is 100%.
Bootstrap support for B4KWQ6 as seed ortholog is 100%.

Group of orthologs #1793. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 D.mojavensis:68

A8ISU5              	100.00%		B4KLU5              	100.00%
A8J4V3              	37.94%		B4KBE5              	5.86%
A8I6X4              	34.30%		
A8HTV6              	24.12%		
A8HTV8              	24.00%		
A8ITU4              	22.42%		
A8IHD2              	5.70%		
Bootstrap support for A8ISU5 as seed ortholog is 52%.
Alternative seed ortholog is A8JI24 (1 bits away from this cluster)
Bootstrap support for B4KLU5 as seed ortholog is 100%.

Group of orthologs #1794. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:68

A8JDR9              	100.00%		B4K5G1              	100.00%
A8JDR8              	51.60%		
A8JDR7              	20.57%		
Bootstrap support for A8JDR9 as seed ortholog is 100%.
Bootstrap support for B4K5G1 as seed ortholog is 100%.

Group of orthologs #1795. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:68

A8ITL8              	100.00%		B4KQC0              	100.00%
                    	       		B4KJA3              	40.33%
Bootstrap support for A8ITL8 as seed ortholog is 100%.
Bootstrap support for B4KQC0 as seed ortholog is 100%.

Group of orthologs #1796. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:68

A8IGB6              	100.00%		B4K6E9              	100.00%
Bootstrap support for A8IGB6 as seed ortholog is 100%.
Bootstrap support for B4K6E9 as seed ortholog is 100%.

Group of orthologs #1797. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:13

A8IX50              	100.00%		B4K9M3              	100.00%
Bootstrap support for A8IX50 as seed ortholog is 100%.
Bootstrap support for B4K9M3 as seed ortholog is 64%.
Alternative seed ortholog is B4KT26 (13 bits away from this cluster)

Group of orthologs #1798. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:68

A8I2N9              	100.00%		B4KRU2              	100.00%
Bootstrap support for A8I2N9 as seed ortholog is 100%.
Bootstrap support for B4KRU2 as seed ortholog is 100%.

Group of orthologs #1799. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:68

A8J0D6              	100.00%		B4KK56              	100.00%
Bootstrap support for A8J0D6 as seed ortholog is 100%.
Bootstrap support for B4KK56 as seed ortholog is 100%.

Group of orthologs #1800. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 D.mojavensis:68

A8IYN5              	100.00%		B4KXE5              	100.00%
Bootstrap support for A8IYN5 as seed ortholog is 100%.
Bootstrap support for B4KXE5 as seed ortholog is 100%.

Group of orthologs #1801. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:67

A8IQ82              	100.00%		B4K4E8              	100.00%
                    	       		B4L0H3              	55.65%
Bootstrap support for A8IQ82 as seed ortholog is 100%.
Bootstrap support for B4K4E8 as seed ortholog is 100%.

Group of orthologs #1802. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:67

Q0ZB34              	100.00%		B4L5X4              	100.00%
                    	       		B4K6I7              	15.00%
Bootstrap support for Q0ZB34 as seed ortholog is 100%.
Bootstrap support for B4L5X4 as seed ortholog is 100%.

Group of orthologs #1803. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:22

A8J8G2              	100.00%		B4KDL8              	100.00%
Bootstrap support for A8J8G2 as seed ortholog is 100%.
Bootstrap support for B4KDL8 as seed ortholog is 63%.
Alternative seed ortholog is B4L4F7 (22 bits away from this cluster)

Group of orthologs #1804. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:67

A8IRU4              	100.00%		B4L4A1              	100.00%
Bootstrap support for A8IRU4 as seed ortholog is 100%.
Bootstrap support for B4L4A1 as seed ortholog is 100%.

Group of orthologs #1805. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:67

A8J8Z4              	100.00%		B4L7B7              	100.00%
Bootstrap support for A8J8Z4 as seed ortholog is 100%.
Bootstrap support for B4L7B7 as seed ortholog is 100%.

Group of orthologs #1806. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:14

A8JER6              	100.00%		B4L1Z8              	100.00%
Bootstrap support for A8JER6 as seed ortholog is 100%.
Bootstrap support for B4L1Z8 as seed ortholog is 83%.

Group of orthologs #1807. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 D.mojavensis:67

Q9LKH0              	100.00%		B4L5A3              	100.00%
Bootstrap support for Q9LKH0 as seed ortholog is 100%.
Bootstrap support for B4L5A3 as seed ortholog is 100%.

Group of orthologs #1808. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:66

A8IEX6              	100.00%		B4L0D6              	100.00%
                    	       		B4KKW1              	34.07%
Bootstrap support for A8IEX6 as seed ortholog is 100%.
Bootstrap support for B4L0D6 as seed ortholog is 100%.

Group of orthologs #1809. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:66

A8IA65              	100.00%		B4K609              	100.00%
Bootstrap support for A8IA65 as seed ortholog is 100%.
Bootstrap support for B4K609 as seed ortholog is 100%.

Group of orthologs #1810. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 D.mojavensis:66

A8IXI5              	100.00%		B4KH09              	100.00%
Bootstrap support for A8IXI5 as seed ortholog is 100%.
Bootstrap support for B4KH09 as seed ortholog is 100%.

Group of orthologs #1811. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

A8JCE2              	100.00%		B4L8S3              	100.00%
                    	       		B4KSC9              	8.99%
                    	       		B4KNS0              	5.04%
Bootstrap support for A8JCE2 as seed ortholog is 100%.
Bootstrap support for B4L8S3 as seed ortholog is 100%.

Group of orthologs #1812. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

A8I4X5              	100.00%		B4K997              	100.00%
                    	       		B4KAU0              	66.29%
Bootstrap support for A8I4X5 as seed ortholog is 100%.
Bootstrap support for B4K997 as seed ortholog is 100%.

Group of orthologs #1813. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

A8IH64              	100.00%		B4KKL0              	100.00%
Bootstrap support for A8IH64 as seed ortholog is 100%.
Bootstrap support for B4KKL0 as seed ortholog is 100%.

Group of orthologs #1814. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

A8ITN4              	100.00%		B4KP23              	100.00%
Bootstrap support for A8ITN4 as seed ortholog is 100%.
Bootstrap support for B4KP23 as seed ortholog is 100%.

Group of orthologs #1815. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

Q6V9A9              	100.00%		B4KER0              	100.00%
Bootstrap support for Q6V9A9 as seed ortholog is 100%.
Bootstrap support for B4KER0 as seed ortholog is 100%.

Group of orthologs #1816. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

A8IWT7              	100.00%		B4L749              	100.00%
Bootstrap support for A8IWT7 as seed ortholog is 100%.
Bootstrap support for B4L749 as seed ortholog is 100%.

Group of orthologs #1817. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 D.mojavensis:65

A8JH93              	100.00%		B4L6M7              	100.00%
Bootstrap support for A8JH93 as seed ortholog is 100%.
Bootstrap support for B4L6M7 as seed ortholog is 100%.

Group of orthologs #1818. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:64

A8I0K9              	100.00%		B4KXF2              	100.00%
                    	       		B4KXF3              	46.17%
                    	       		B4KXF1              	41.89%
Bootstrap support for A8I0K9 as seed ortholog is 100%.
Bootstrap support for B4KXF2 as seed ortholog is 100%.

Group of orthologs #1819. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:64

A8IQZ0              	100.00%		B4L8R6              	100.00%
                    	       		B4L9M1              	6.30%
Bootstrap support for A8IQZ0 as seed ortholog is 100%.
Bootstrap support for B4L8R6 as seed ortholog is 100%.

Group of orthologs #1820. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:11

O04355              	100.00%		B4KVE1              	100.00%
                    	       		B4KQW8              	40.53%
Bootstrap support for O04355 as seed ortholog is 100%.
Bootstrap support for B4KVE1 as seed ortholog is 72%.
Alternative seed ortholog is B4KU28 (11 bits away from this cluster)

Group of orthologs #1821. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:64

A8HW20              	100.00%		B4KTG5              	100.00%
Bootstrap support for A8HW20 as seed ortholog is 100%.
Bootstrap support for B4KTG5 as seed ortholog is 100%.

Group of orthologs #1822. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:64

A8IVB9              	100.00%		B4KTQ6              	100.00%
Bootstrap support for A8IVB9 as seed ortholog is 100%.
Bootstrap support for B4KTQ6 as seed ortholog is 100%.

Group of orthologs #1823. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:64

Q8LLV9              	100.00%		B4KLS9              	100.00%
Bootstrap support for Q8LLV9 as seed ortholog is 100%.
Bootstrap support for B4KLS9 as seed ortholog is 100%.

Group of orthologs #1824. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 D.mojavensis:64

A8JIK2              	100.00%		B4KY72              	100.00%
Bootstrap support for A8JIK2 as seed ortholog is 100%.
Bootstrap support for B4KY72 as seed ortholog is 100%.

Group of orthologs #1825. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:63

A8J9H2              	100.00%		B4KHI1              	100.00%
                    	       		B4KUT8              	53.64%
                    	       		B4L8P0              	28.18%
                    	       		B4L3S7              	22.73%
                    	       		B4L8P1              	10.91%
Bootstrap support for A8J9H2 as seed ortholog is 100%.
Bootstrap support for B4KHI1 as seed ortholog is 100%.

Group of orthologs #1826. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:63

A8I2I8              	100.00%		B4K7N9              	100.00%
Bootstrap support for A8I2I8 as seed ortholog is 100%.
Bootstrap support for B4K7N9 as seed ortholog is 100%.

Group of orthologs #1827. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:63

A8IHA8              	100.00%		B4KEH7              	100.00%
Bootstrap support for A8IHA8 as seed ortholog is 100%.
Bootstrap support for B4KEH7 as seed ortholog is 100%.

Group of orthologs #1828. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 D.mojavensis:63

A8JI29              	100.00%		B4KRM2              	100.00%
Bootstrap support for A8JI29 as seed ortholog is 100%.
Bootstrap support for B4KRM2 as seed ortholog is 100%.

Group of orthologs #1829. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:62

A8HQS2              	100.00%		B4L1S4              	100.00%
Bootstrap support for A8HQS2 as seed ortholog is 100%.
Bootstrap support for B4L1S4 as seed ortholog is 100%.

Group of orthologs #1830. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:62

A8IY91              	100.00%		B4KUP3              	100.00%
Bootstrap support for A8IY91 as seed ortholog is 100%.
Bootstrap support for B4KUP3 as seed ortholog is 100%.

Group of orthologs #1831. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:62

A8JHU3              	100.00%		B4KKF8              	100.00%
Bootstrap support for A8JHU3 as seed ortholog is 100%.
Bootstrap support for B4KKF8 as seed ortholog is 100%.

Group of orthologs #1832. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 D.mojavensis:62

A8IW57              	100.00%		B4L5X2              	100.00%
Bootstrap support for A8IW57 as seed ortholog is 100%.
Bootstrap support for B4L5X2 as seed ortholog is 100%.

Group of orthologs #1833. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:61

A8IRA1              	100.00%		B4KWF2              	100.00%
A8IYK4              	27.69%		
Bootstrap support for A8IRA1 as seed ortholog is 100%.
Bootstrap support for B4KWF2 as seed ortholog is 100%.

Group of orthologs #1834. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:61

A8HNP5              	100.00%		B4KLF6              	100.00%
Bootstrap support for A8HNP5 as seed ortholog is 100%.
Bootstrap support for B4KLF6 as seed ortholog is 100%.

Group of orthologs #1835. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:61

A8I2C0              	100.00%		B4KQQ7              	100.00%
Bootstrap support for A8I2C0 as seed ortholog is 100%.
Bootstrap support for B4KQQ7 as seed ortholog is 100%.

Group of orthologs #1836. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:61

A8J6T2              	100.00%		B4KB91              	100.00%
Bootstrap support for A8J6T2 as seed ortholog is 100%.
Bootstrap support for B4KB91 as seed ortholog is 100%.

Group of orthologs #1837. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:61

A8HX89              	100.00%		B4L7Q2              	100.00%
Bootstrap support for A8HX89 as seed ortholog is 100%.
Bootstrap support for B4L7Q2 as seed ortholog is 100%.

Group of orthologs #1838. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 D.mojavensis:61

A8ICG2              	100.00%		B4L969              	100.00%
Bootstrap support for A8ICG2 as seed ortholog is 100%.
Bootstrap support for B4L969 as seed ortholog is 100%.

Group of orthologs #1839. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 D.mojavensis:11

A8J3L2              	100.00%		B4L1Y4              	100.00%
Bootstrap support for A8J3L2 as seed ortholog is 54%.
Alternative seed ortholog is A8JFF5 (5 bits away from this cluster)
Bootstrap support for B4L1Y4 as seed ortholog is 60%.
Alternative seed ortholog is B4L5I6 (11 bits away from this cluster)

Group of orthologs #1840. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 D.mojavensis:60

A8JHE6              	100.00%		B4L581              	100.00%
A8IRM8              	6.37%		
Bootstrap support for A8JHE6 as seed ortholog is 73%.
Alternative seed ortholog is A8J215 (18 bits away from this cluster)
Bootstrap support for B4L581 as seed ortholog is 100%.

Group of orthologs #1841. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:60

A8HPP5              	100.00%		B4K8D8              	100.00%
Bootstrap support for A8HPP5 as seed ortholog is 100%.
Bootstrap support for B4K8D8 as seed ortholog is 100%.

Group of orthologs #1842. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 D.mojavensis:60

A8J6P9              	100.00%		B4L6X2              	100.00%
Bootstrap support for A8J6P9 as seed ortholog is 100%.
Bootstrap support for B4L6X2 as seed ortholog is 100%.

Group of orthologs #1843. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:59

A8I9T4              	100.00%		B4KGA8              	100.00%
                    	       		B4KI83              	26.60%
Bootstrap support for A8I9T4 as seed ortholog is 100%.
Bootstrap support for B4KGA8 as seed ortholog is 100%.

Group of orthologs #1844. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:59

A8I4H7              	100.00%		B4L312              	100.00%
                    	       		B4L313              	37.69%
Bootstrap support for A8I4H7 as seed ortholog is 100%.
Bootstrap support for B4L312 as seed ortholog is 100%.

Group of orthologs #1845. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:59

A8ICM2              	100.00%		B4L5P0              	100.00%
                    	       		B4L095              	14.84%
Bootstrap support for A8ICM2 as seed ortholog is 100%.
Bootstrap support for B4L5P0 as seed ortholog is 100%.

Group of orthologs #1846. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 D.mojavensis:59

A8JFS1              	100.00%		B4L1U9              	100.00%
                    	       		B4KBJ8              	54.94%
Bootstrap support for A8JFS1 as seed ortholog is 100%.
Bootstrap support for B4L1U9 as seed ortholog is 100%.

Group of orthologs #1847. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 D.mojavensis:6

A8JF20              	100.00%		B4KFI7              	100.00%
Bootstrap support for A8JF20 as seed ortholog is 63%.
Alternative seed ortholog is A8ILA3 (13 bits away from this cluster)
Bootstrap support for B4KFI7 as seed ortholog is 69%.
Alternative seed ortholog is B4L4Y9 (6 bits away from this cluster)

Group of orthologs #1848. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 D.mojavensis:58

A8HXM5              	100.00%		B4KV12              	100.00%
Bootstrap support for A8HXM5 as seed ortholog is 100%.
Bootstrap support for B4KV12 as seed ortholog is 100%.

Group of orthologs #1849. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 D.mojavensis:58

A8IWI1              	100.00%		B4KXU8              	100.00%
Bootstrap support for A8IWI1 as seed ortholog is 100%.
Bootstrap support for B4KXU8 as seed ortholog is 100%.

Group of orthologs #1850. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:57

A8J8L7              	100.00%		B4KGN7              	100.00%
A8J8L6              	29.08%		B4KGN6              	99.41%
A8J8L5              	28.23%		B4KGP0              	94.86%
                    	       		B4KGN8              	93.28%
                    	       		B4KGN5              	90.51%
                    	       		B4KGN9              	89.92%
                    	       		B4KEZ5              	86.56%
                    	       		B4KIS8              	51.19%
Bootstrap support for A8J8L7 as seed ortholog is 100%.
Bootstrap support for B4KGN7 as seed ortholog is 100%.

Group of orthologs #1851. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 D.mojavensis:57

A8I471              	100.00%		B4KHP7              	100.00%
                    	       		B4KS10              	56.32%
Bootstrap support for A8I471 as seed ortholog is 63%.
Alternative seed ortholog is A8J2V7 (6 bits away from this cluster)
Bootstrap support for B4KHP7 as seed ortholog is 100%.

Group of orthologs #1852. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:57

A8IY12              	100.00%		B4K4S2              	100.00%
Bootstrap support for A8IY12 as seed ortholog is 100%.
Bootstrap support for B4K4S2 as seed ortholog is 100%.

Group of orthologs #1853. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:57

A8I6P9              	100.00%		B4KMZ6              	100.00%
Bootstrap support for A8I6P9 as seed ortholog is 100%.
Bootstrap support for B4KMZ6 as seed ortholog is 100%.

Group of orthologs #1854. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 D.mojavensis:57

A8IA11              	100.00%		B4KTL0              	100.00%
Bootstrap support for A8IA11 as seed ortholog is 100%.
Bootstrap support for B4KTL0 as seed ortholog is 100%.

Group of orthologs #1855. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 D.mojavensis:57

A8J9X1              	100.00%		B4L8J8              	100.00%
Bootstrap support for A8J9X1 as seed ortholog is 59%.
Alternative seed ortholog is P07891 (13 bits away from this cluster)
Bootstrap support for B4L8J8 as seed ortholog is 100%.

Group of orthologs #1856. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:56

A8J8H6              	100.00%		B4KJ75              	100.00%
                    	       		B4KLD7              	21.85%
Bootstrap support for A8J8H6 as seed ortholog is 100%.
Bootstrap support for B4KJ75 as seed ortholog is 100%.

Group of orthologs #1857. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:56

A8HRH3              	100.00%		B4KSN6              	100.00%
Bootstrap support for A8HRH3 as seed ortholog is 100%.
Bootstrap support for B4KSN6 as seed ortholog is 100%.

Group of orthologs #1858. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:56

A8J8W7              	100.00%		B4K5R4              	100.00%
Bootstrap support for A8J8W7 as seed ortholog is 100%.
Bootstrap support for B4K5R4 as seed ortholog is 100%.

Group of orthologs #1859. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:56

A8IC10              	100.00%		B4KY53              	100.00%
Bootstrap support for A8IC10 as seed ortholog is 100%.
Bootstrap support for B4KY53 as seed ortholog is 100%.

Group of orthologs #1860. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 D.mojavensis:56

A8J6Z1              	100.00%		B4KY38              	100.00%
Bootstrap support for A8J6Z1 as seed ortholog is 67%.
Alternative seed ortholog is A8JAL6 (13 bits away from this cluster)
Bootstrap support for B4KY38 as seed ortholog is 100%.

Group of orthologs #1861. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 D.mojavensis:56

A8JCU9              	100.00%		B4KT86              	100.00%
Bootstrap support for A8JCU9 as seed ortholog is 100%.
Bootstrap support for B4KT86 as seed ortholog is 100%.

Group of orthologs #1862. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:55

A8HM66              	100.00%		B4KIK8              	100.00%
Bootstrap support for A8HM66 as seed ortholog is 100%.
Bootstrap support for B4KIK8 as seed ortholog is 100%.

Group of orthologs #1863. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:55

A8HWG4              	100.00%		B4KGA2              	100.00%
Bootstrap support for A8HWG4 as seed ortholog is 100%.
Bootstrap support for B4KGA2 as seed ortholog is 100%.

Group of orthologs #1864. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:55

A8HPC9              	100.00%		B4KNT6              	100.00%
Bootstrap support for A8HPC9 as seed ortholog is 100%.
Bootstrap support for B4KNT6 as seed ortholog is 100%.

Group of orthologs #1865. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:55

A8JBD0              	100.00%		B4KJM7              	100.00%
Bootstrap support for A8JBD0 as seed ortholog is 100%.
Bootstrap support for B4KJM7 as seed ortholog is 100%.

Group of orthologs #1866. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:55

A8JGZ2              	100.00%		B4KZ48              	100.00%
Bootstrap support for A8JGZ2 as seed ortholog is 100%.
Bootstrap support for B4KZ48 as seed ortholog is 100%.

Group of orthologs #1867. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 D.mojavensis:55

Q6UKY7              	100.00%		B4L250              	100.00%
Bootstrap support for Q6UKY7 as seed ortholog is 100%.
Bootstrap support for B4L250 as seed ortholog is 100%.

Group of orthologs #1868. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8IZ77              	100.00%		B4K5C3              	100.00%
                    	       		B4K5C2              	41.51%
Bootstrap support for A8IZ77 as seed ortholog is 100%.
Bootstrap support for B4K5C3 as seed ortholog is 100%.

Group of orthologs #1869. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8J098              	100.00%		B4KYM6              	100.00%
A8JGF9              	100.00%		
Bootstrap support for A8J098 as seed ortholog is 100%.
Bootstrap support for A8JGF9 as seed ortholog is 100%.
Bootstrap support for B4KYM6 as seed ortholog is 100%.

Group of orthologs #1870. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8HV10              	100.00%		B4K934              	100.00%
Bootstrap support for A8HV10 as seed ortholog is 100%.
Bootstrap support for B4K934 as seed ortholog is 100%.

Group of orthologs #1871. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8IIH0              	100.00%		B4K7L2              	100.00%
Bootstrap support for A8IIH0 as seed ortholog is 100%.
Bootstrap support for B4K7L2 as seed ortholog is 100%.

Group of orthologs #1872. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8I4Y6              	100.00%		B4KIC1              	100.00%
Bootstrap support for A8I4Y6 as seed ortholog is 100%.
Bootstrap support for B4KIC1 as seed ortholog is 100%.

Group of orthologs #1873. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8JF24              	100.00%		B4KHB4              	100.00%
Bootstrap support for A8JF24 as seed ortholog is 100%.
Bootstrap support for B4KHB4 as seed ortholog is 100%.

Group of orthologs #1874. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 D.mojavensis:54

A8J7K1              	100.00%		B4KV74              	100.00%
Bootstrap support for A8J7K1 as seed ortholog is 100%.
Bootstrap support for B4KV74 as seed ortholog is 100%.

Group of orthologs #1875. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:4

A8JE78              	100.00%		B4KXH6              	100.00%
                    	       		B4KXH2              	28.57%
                    	       		B4KXH8              	22.86%
                    	       		B4L9F0              	19.18%
                    	       		B4KM22              	14.29%
                    	       		B4KTW6              	13.88%
                    	       		B4KM21              	13.06%
                    	       		B4L751              	12.24%
                    	       		B4KTP1              	12.24%
                    	       		B4KTX2              	11.02%
                    	       		B4KTX6              	10.61%
                    	       		B4KF12              	10.61%
                    	       		B4KF13              	10.61%
                    	       		B4KXH4              	10.61%
                    	       		B4K4E2              	6.53%
Bootstrap support for A8JE78 as seed ortholog is 100%.
Bootstrap support for B4KXH6 as seed ortholog is 56%.
Alternative seed ortholog is B4L9Q1 (4 bits away from this cluster)

Group of orthologs #1876. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:53

A8HPU2              	100.00%		B4KAK0              	100.00%
                    	       		B4KAI9              	33.06%
Bootstrap support for A8HPU2 as seed ortholog is 100%.
Bootstrap support for B4KAK0 as seed ortholog is 100%.

Group of orthologs #1877. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:53

A8IJ98              	100.00%		B4KCR1              	100.00%
Bootstrap support for A8IJ98 as seed ortholog is 100%.
Bootstrap support for B4KCR1 as seed ortholog is 100%.

Group of orthologs #1878. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:53

A8ISD8              	100.00%		B4KER5              	100.00%
Bootstrap support for A8ISD8 as seed ortholog is 100%.
Bootstrap support for B4KER5 as seed ortholog is 100%.

Group of orthologs #1879. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:53

A8HVD7              	100.00%		B4L8M9              	100.00%
Bootstrap support for A8HVD7 as seed ortholog is 61%.
Alternative seed ortholog is A8J6M7 (3 bits away from this cluster)
Bootstrap support for B4L8M9 as seed ortholog is 100%.

Group of orthologs #1880. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:53

A8JHD0              	100.00%		B4KEY7              	100.00%
Bootstrap support for A8JHD0 as seed ortholog is 100%.
Bootstrap support for B4KEY7 as seed ortholog is 100%.

Group of orthologs #1881. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 D.mojavensis:53

A8JH84              	100.00%		B4KXJ6              	100.00%
Bootstrap support for A8JH84 as seed ortholog is 100%.
Bootstrap support for B4KXJ6 as seed ortholog is 100%.

Group of orthologs #1882. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 D.mojavensis:52

A8INS3              	100.00%		B4K993              	100.00%
A8IU49              	7.01%		
Bootstrap support for A8INS3 as seed ortholog is 52%.
Alternative seed ortholog is A8JBZ2 (5 bits away from this cluster)
Bootstrap support for B4K993 as seed ortholog is 100%.

Group of orthologs #1883. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 D.mojavensis:52

A8IZN4              	100.00%		B4KFY8              	100.00%
A8IZN6              	100.00%		
Bootstrap support for A8IZN4 as seed ortholog is 61%.
Alternative seed ortholog is A8ICZ0 (8 bits away from this cluster)
Bootstrap support for A8IZN6 as seed ortholog is 56%.
Alternative seed ortholog is A8ICZ0 (8 bits away from this cluster)
Bootstrap support for B4KFY8 as seed ortholog is 100%.

Group of orthologs #1884. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:52

A8JH36              	100.00%		B4K512              	100.00%
A8IMF2              	25.33%		
Bootstrap support for A8JH36 as seed ortholog is 100%.
Bootstrap support for B4K512 as seed ortholog is 100%.

Group of orthologs #1885. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:52

Q2HWK7              	100.00%		B4KHX9              	100.00%
                    	       		B4KHY0              	54.00%
Bootstrap support for Q2HWK7 as seed ortholog is 100%.
Bootstrap support for B4KHX9 as seed ortholog is 100%.

Group of orthologs #1886. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:52

A8HYP5              	100.00%		B4KIN6              	100.00%
Bootstrap support for A8HYP5 as seed ortholog is 100%.
Bootstrap support for B4KIN6 as seed ortholog is 100%.

Group of orthologs #1887. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:52

A8JCL3              	100.00%		B4KAS9              	100.00%
Bootstrap support for A8JCL3 as seed ortholog is 100%.
Bootstrap support for B4KAS9 as seed ortholog is 100%.

Group of orthologs #1888. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:52

A8JBS2              	100.00%		B4KCG0              	100.00%
Bootstrap support for A8JBS2 as seed ortholog is 100%.
Bootstrap support for B4KCG0 as seed ortholog is 100%.

Group of orthologs #1889. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 D.mojavensis:52

A8JAF5              	100.00%		B4KYN5              	100.00%
Bootstrap support for A8JAF5 as seed ortholog is 100%.
Bootstrap support for B4KYN5 as seed ortholog is 100%.

Group of orthologs #1890. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 D.mojavensis:51

A8J210              	100.00%		B4KZ74              	100.00%
Bootstrap support for A8J210 as seed ortholog is 100%.
Bootstrap support for B4KZ74 as seed ortholog is 100%.

Group of orthologs #1891. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 D.mojavensis:51

A8JDN8              	100.00%		B4KRC8              	100.00%
Bootstrap support for A8JDN8 as seed ortholog is 100%.
Bootstrap support for B4KRC8 as seed ortholog is 100%.

Group of orthologs #1892. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 D.mojavensis:51

A8JHD2              	100.00%		B4KTP5              	100.00%
Bootstrap support for A8JHD2 as seed ortholog is 100%.
Bootstrap support for B4KTP5 as seed ortholog is 100%.

Group of orthologs #1893. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A7UCH9              	100.00%		B4KDC1              	100.00%
A8JB12              	51.04%		
Bootstrap support for A7UCH9 as seed ortholog is 100%.
Bootstrap support for B4KDC1 as seed ortholog is 100%.

Group of orthologs #1894. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 D.mojavensis:50

A8JCR5              	100.00%		B4L4D3              	100.00%
A8JBP7              	13.28%		
Bootstrap support for A8JCR5 as seed ortholog is 57%.
Alternative seed ortholog is A8IZI4 (8 bits away from this cluster)
Bootstrap support for B4L4D3 as seed ortholog is 100%.

Group of orthologs #1895. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A8IGW2              	100.00%		B4K5I5              	100.00%
Bootstrap support for A8IGW2 as seed ortholog is 100%.
Bootstrap support for B4K5I5 as seed ortholog is 100%.

Group of orthologs #1896. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 D.mojavensis:50

A8I1Y0              	100.00%		B4KGS2              	100.00%
Bootstrap support for A8I1Y0 as seed ortholog is 52%.
Alternative seed ortholog is A8J7D1 (1 bits away from this cluster)
Bootstrap support for B4KGS2 as seed ortholog is 100%.

Group of orthologs #1897. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A8I408              	100.00%		B4KWH1              	100.00%
Bootstrap support for A8I408 as seed ortholog is 100%.
Bootstrap support for B4KWH1 as seed ortholog is 100%.

Group of orthologs #1898. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A8HYL5              	100.00%		B4L2F0              	100.00%
Bootstrap support for A8HYL5 as seed ortholog is 100%.
Bootstrap support for B4L2F0 as seed ortholog is 100%.

Group of orthologs #1899. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A8JGC9              	100.00%		B4KDE9              	100.00%
Bootstrap support for A8JGC9 as seed ortholog is 100%.
Bootstrap support for B4KDE9 as seed ortholog is 100%.

Group of orthologs #1900. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A8J7D2              	100.00%		B4KXH0              	100.00%
Bootstrap support for A8J7D2 as seed ortholog is 100%.
Bootstrap support for B4KXH0 as seed ortholog is 100%.

Group of orthologs #1901. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 D.mojavensis:50

A8JF05              	100.00%		B4KXS8              	100.00%
Bootstrap support for A8JF05 as seed ortholog is 100%.
Bootstrap support for B4KXS8 as seed ortholog is 100%.

Group of orthologs #1902. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:49

A8JHY4              	100.00%		B4KKF9              	100.00%
Q6S7R7              	24.69%		
A8JFK6              	12.96%		
Bootstrap support for A8JHY4 as seed ortholog is 100%.
Bootstrap support for B4KKF9 as seed ortholog is 100%.

Group of orthologs #1903. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:49

A8INW7              	100.00%		B4KWF3              	100.00%
                    	       		B4L6H5              	70.54%
Bootstrap support for A8INW7 as seed ortholog is 100%.
Bootstrap support for B4KWF3 as seed ortholog is 100%.

Group of orthologs #1904. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:5

A8JAT7              	100.00%		B4KZ57              	100.00%
Bootstrap support for A8JAT7 as seed ortholog is 100%.
Bootstrap support for B4KZ57 as seed ortholog is 63%.
Alternative seed ortholog is B4KP12 (5 bits away from this cluster)

Group of orthologs #1905. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:49

A8JHF3              	100.00%		B4KX20              	100.00%
Bootstrap support for A8JHF3 as seed ortholog is 100%.
Bootstrap support for B4KX20 as seed ortholog is 100%.

Group of orthologs #1906. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 D.mojavensis:49

Q8H6T3              	100.00%		B4L870              	100.00%
Bootstrap support for Q8H6T3 as seed ortholog is 100%.
Bootstrap support for B4L870 as seed ortholog is 100%.

Group of orthologs #1907. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:48

A8IYG4              	100.00%		B4KF30              	100.00%
                    	       		B4L8B2              	8.33%
Bootstrap support for A8IYG4 as seed ortholog is 100%.
Bootstrap support for B4KF30 as seed ortholog is 100%.

Group of orthologs #1908. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:48

A8I7D1              	100.00%		B4KM71              	100.00%
Bootstrap support for A8I7D1 as seed ortholog is 100%.
Bootstrap support for B4KM71 as seed ortholog is 100%.

Group of orthologs #1909. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:48

A8HQ64              	100.00%		B4KV25              	100.00%
Bootstrap support for A8HQ64 as seed ortholog is 100%.
Bootstrap support for B4KV25 as seed ortholog is 100%.

Group of orthologs #1910. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 D.mojavensis:48

A8J1X7              	100.00%		B4L9M0              	100.00%
Bootstrap support for A8J1X7 as seed ortholog is 100%.
Bootstrap support for B4L9M0 as seed ortholog is 100%.

Group of orthologs #1911. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8IZ04              	100.00%		B4L2C3              	100.00%
A8IYZ9              	63.49%		B4K633              	21.02%
A8HXN0              	16.15%		
Bootstrap support for A8IZ04 as seed ortholog is 100%.
Bootstrap support for B4L2C3 as seed ortholog is 100%.

Group of orthologs #1912. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 D.mojavensis:47

A8JHQ3              	100.00%		B4KCP9              	100.00%
A8J6V9              	10.42%		
A8HMC5              	8.33%		
Bootstrap support for A8JHQ3 as seed ortholog is 42%.
Alternative seed ortholog is A8HQ15 (3 bits away from this cluster)
Bootstrap support for B4KCP9 as seed ortholog is 100%.

Group of orthologs #1913. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8JEJ6              	100.00%		B4KL75              	100.00%
                    	       		B4L375              	20.70%
Bootstrap support for A8JEJ6 as seed ortholog is 100%.
Bootstrap support for B4KL75 as seed ortholog is 100%.

Group of orthologs #1914. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8HQJ8              	100.00%		B4K8E9              	100.00%
Bootstrap support for A8HQJ8 as seed ortholog is 100%.
Bootstrap support for B4K8E9 as seed ortholog is 100%.

Group of orthologs #1915. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8J8W4              	100.00%		B4K680              	100.00%
Bootstrap support for A8J8W4 as seed ortholog is 100%.
Bootstrap support for B4K680 as seed ortholog is 100%.

Group of orthologs #1916. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8IJC4              	100.00%		B4KWZ2              	100.00%
Bootstrap support for A8IJC4 as seed ortholog is 100%.
Bootstrap support for B4KWZ2 as seed ortholog is 100%.

Group of orthologs #1917. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8IYX9              	100.00%		B4KRU4              	100.00%
Bootstrap support for A8IYX9 as seed ortholog is 100%.
Bootstrap support for B4KRU4 as seed ortholog is 100%.

Group of orthologs #1918. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8JFG0              	100.00%		B4KMB3              	100.00%
Bootstrap support for A8JFG0 as seed ortholog is 100%.
Bootstrap support for B4KMB3 as seed ortholog is 100%.

Group of orthologs #1919. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 D.mojavensis:47

A8JC58              	100.00%		B4KTB8              	100.00%
Bootstrap support for A8JC58 as seed ortholog is 100%.
Bootstrap support for B4KTB8 as seed ortholog is 100%.

Group of orthologs #1920. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:46

A8HVN4              	100.00%		B4K9C2              	100.00%
                    	       		B4K4H8              	31.70%
                    	       		B4L1F6              	27.45%
Bootstrap support for A8HVN4 as seed ortholog is 100%.
Bootstrap support for B4K9C2 as seed ortholog is 100%.

Group of orthologs #1921. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:46

A8IBN3              	100.00%		B4KYF2              	100.00%
A8J827              	25.90%		
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for B4KYF2 as seed ortholog is 100%.

Group of orthologs #1922. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:46

A8IYS8              	100.00%		B4L5N9              	100.00%
Bootstrap support for A8IYS8 as seed ortholog is 100%.
Bootstrap support for B4L5N9 as seed ortholog is 100%.

Group of orthologs #1923. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 D.mojavensis:46

A8JEJ4              	100.00%		B4KZD1              	100.00%
Bootstrap support for A8JEJ4 as seed ortholog is 100%.
Bootstrap support for B4KZD1 as seed ortholog is 100%.

Group of orthologs #1924. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:45

A8I6R6              	100.00%		B4L117              	100.00%
A8I6S0              	42.28%		B4L113              	24.02%
A8HNU9              	9.93%		B4L111              	22.91%
A8HNU7              	9.19%		B4L109              	19.27%
A8J2Z3              	5.51%		B4L112              	19.27%
                    	       		B4L115              	16.20%
                    	       		B4KTG1              	15.08%
                    	       		B4L114              	10.06%
                    	       		B4KWV8              	8.66%
Bootstrap support for A8I6R6 as seed ortholog is 100%.
Bootstrap support for B4L117 as seed ortholog is 100%.

Group of orthologs #1925. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:45

A8JGB5              	100.00%		B4KQ09              	100.00%
                    	       		B4KQ10              	41.49%
                    	       		B4KX44              	36.70%
                    	       		B4KX46              	31.38%
                    	       		B4KX48              	28.01%
                    	       		B4KX43              	22.52%
                    	       		B4KX45              	21.10%
                    	       		B4KD83              	6.74%
Bootstrap support for A8JGB5 as seed ortholog is 100%.
Bootstrap support for B4KQ09 as seed ortholog is 100%.

Group of orthologs #1926. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:45

A8I2N3              	100.00%		B4KCX4              	100.00%
Bootstrap support for A8I2N3 as seed ortholog is 100%.
Bootstrap support for B4KCX4 as seed ortholog is 100%.

Group of orthologs #1927. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:45

A8ISA8              	100.00%		B4L3C6              	100.00%
Bootstrap support for A8ISA8 as seed ortholog is 100%.
Bootstrap support for B4L3C6 as seed ortholog is 100%.

Group of orthologs #1928. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 D.mojavensis:45

Q6V504              	100.00%		B4KTD7              	100.00%
Bootstrap support for Q6V504 as seed ortholog is 100%.
Bootstrap support for B4KTD7 as seed ortholog is 100%.

Group of orthologs #1929. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 D.mojavensis:44

A8IIL8              	100.00%		B4K8Q3              	100.00%
                    	       		B4K8Q2              	43.11%
                    	       		B4K5A1              	30.03%
                    	       		B4L8V6              	8.26%
                    	       		B4L697              	7.85%
Bootstrap support for A8IIL8 as seed ortholog is 49%.
Alternative seed ortholog is A8J8S4 (1 bits away from this cluster)
Bootstrap support for B4K8Q3 as seed ortholog is 100%.

Group of orthologs #1930. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:44

A8HP00              	100.00%		B4K685              	100.00%
Bootstrap support for A8HP00 as seed ortholog is 100%.
Bootstrap support for B4K685 as seed ortholog is 100%.

Group of orthologs #1931. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:44

A8IZ28              	100.00%		B4L7S5              	100.00%
Bootstrap support for A8IZ28 as seed ortholog is 100%.
Bootstrap support for B4L7S5 as seed ortholog is 100%.

Group of orthologs #1932. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 D.mojavensis:44

A8JBQ5              	100.00%		B4L213              	100.00%
Bootstrap support for A8JBQ5 as seed ortholog is 100%.
Bootstrap support for B4L213 as seed ortholog is 100%.

Group of orthologs #1933. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:43

A8J759              	100.00%		B4KGD5              	100.00%
A8HN78              	46.86%		B4KL87              	24.92%
A8J915              	38.63%		
A8HPZ0              	37.06%		
A8JCI9              	29.02%		
A8I4T4              	10.78%		
A8J9W3              	10.20%		
A8ISN9              	9.80%		
A8IVT1              	9.41%		
A8J9V6              	7.65%		
Bootstrap support for A8J759 as seed ortholog is 100%.
Bootstrap support for B4KGD5 as seed ortholog is 100%.

Group of orthologs #1934. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:43

A8J4E1              	100.00%		B4KM11              	100.00%
A8HPK0              	32.71%		
A8HZ69              	26.17%		
Bootstrap support for A8J4E1 as seed ortholog is 100%.
Bootstrap support for B4KM11 as seed ortholog is 100%.

Group of orthologs #1935. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:43

A8J8J8              	100.00%		B4KLZ8              	100.00%
A8IEH6              	18.67%		
Bootstrap support for A8J8J8 as seed ortholog is 100%.
Bootstrap support for B4KLZ8 as seed ortholog is 100%.

Group of orthologs #1936. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:43

A8HRI2              	100.00%		B4L1U8              	100.00%
Bootstrap support for A8HRI2 as seed ortholog is 100%.
Bootstrap support for B4L1U8 as seed ortholog is 100%.

Group of orthologs #1937. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 D.mojavensis:43

Q6UKY9              	100.00%		B4KTT1              	100.00%
Bootstrap support for Q6UKY9 as seed ortholog is 100%.
Bootstrap support for B4KTT1 as seed ortholog is 100%.

Group of orthologs #1938. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 D.mojavensis:42

A8J518              	100.00%		B4KH73              	100.00%
                    	       		B4KY77              	99.16%
Bootstrap support for A8J518 as seed ortholog is 100%.
Bootstrap support for B4KH73 as seed ortholog is 100%.

Group of orthologs #1939. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 D.mojavensis:42

A8IRA6              	100.00%		B4L214              	100.00%
                    	       		B4KI63              	20.46%
Bootstrap support for A8IRA6 as seed ortholog is 100%.
Bootstrap support for B4L214 as seed ortholog is 100%.

Group of orthologs #1940. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 D.mojavensis:42

A8IL11              	100.00%		B4L2V6              	100.00%
Bootstrap support for A8IL11 as seed ortholog is 100%.
Bootstrap support for B4L2V6 as seed ortholog is 100%.

Group of orthologs #1941. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 D.mojavensis:41

A8IHY1              	100.00%		B4L116              	100.00%
                    	       		B4KC48              	49.48%
                    	       		B4K5P3              	38.02%
Bootstrap support for A8IHY1 as seed ortholog is 100%.
Bootstrap support for B4L116 as seed ortholog is 100%.

Group of orthologs #1942. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 D.mojavensis:41

A8IZM2              	100.00%		B4KMH0              	100.00%
                    	       		B4KMH1              	90.94%
Bootstrap support for A8IZM2 as seed ortholog is 100%.
Bootstrap support for B4KMH0 as seed ortholog is 100%.

Group of orthologs #1943. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 D.mojavensis:40

A8J1S0              	100.00%		B4L679              	100.00%
A8HZM4              	8.78%		
A8IJZ0              	6.36%		
Bootstrap support for A8J1S0 as seed ortholog is 100%.
Bootstrap support for B4L679 as seed ortholog is 100%.