###################################
295 groups of orthologs
371 in-paralogs from C.militaris
327 in-paralogs from M.jannaschii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 693 bits
Score difference with first non-orthologous sequence - C.militaris:262 M.jannaschii:693

G3JJZ0              	100.00%		Q58445              	100.00%
Bootstrap support for G3JJZ0 as seed ortholog is 99%.
Bootstrap support for Q58445 as seed ortholog is 100%.

Group of orthologs #2. Best score 678 bits
Score difference with first non-orthologous sequence - C.militaris:386 M.jannaschii:678

G3J7E5              	100.00%		Q58556              	100.00%
Bootstrap support for G3J7E5 as seed ortholog is 100%.
Bootstrap support for Q58556 as seed ortholog is 100%.

Group of orthologs #3. Best score 585 bits
Score difference with first non-orthologous sequence - C.militaris:476 M.jannaschii:585

G3J9H9              	100.00%		Q57670              	100.00%
Bootstrap support for G3J9H9 as seed ortholog is 100%.
Bootstrap support for Q57670 as seed ortholog is 100%.

Group of orthologs #4. Best score 551 bits
Score difference with first non-orthologous sequence - C.militaris:422 M.jannaschii:551

G3JKH3              	100.00%		Q58129              	100.00%
Bootstrap support for G3JKH3 as seed ortholog is 100%.
Bootstrap support for Q58129 as seed ortholog is 100%.

Group of orthologs #5. Best score 546 bits
Score difference with first non-orthologous sequence - C.militaris:241 M.jannaschii:546

G3JSC8              	100.00%		Q58623              	100.00%
Bootstrap support for G3JSC8 as seed ortholog is 99%.
Bootstrap support for Q58623 as seed ortholog is 100%.

Group of orthologs #6. Best score 522 bits
Score difference with first non-orthologous sequence - C.militaris:385 M.jannaschii:522

G3JI77              	100.00%		Q57669              	100.00%
Bootstrap support for G3JI77 as seed ortholog is 100%.
Bootstrap support for Q57669 as seed ortholog is 100%.

Group of orthologs #7. Best score 503 bits
Score difference with first non-orthologous sequence - C.militaris:213 M.jannaschii:503

G3JPW1              	100.00%		Q58357              	100.00%
Bootstrap support for G3JPW1 as seed ortholog is 99%.
Bootstrap support for Q58357 as seed ortholog is 100%.

Group of orthologs #8. Best score 486 bits
Score difference with first non-orthologous sequence - C.militaris:486 M.jannaschii:486

G3JN95              	100.00%		Q60181              	100.00%
G3JEV3              	6.03%		
Bootstrap support for G3JN95 as seed ortholog is 100%.
Bootstrap support for Q60181 as seed ortholog is 100%.

Group of orthologs #9. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:208 M.jannaschii:365

G3J650              	100.00%		Q57770              	100.00%
Bootstrap support for G3J650 as seed ortholog is 100%.
Bootstrap support for Q57770 as seed ortholog is 100%.

Group of orthologs #10. Best score 467 bits
Score difference with first non-orthologous sequence - C.militaris:185 M.jannaschii:467

G3JDW6              	100.00%		Q58448              	100.00%
G3JQW4              	7.52%		
Bootstrap support for G3JDW6 as seed ortholog is 99%.
Bootstrap support for Q58448 as seed ortholog is 100%.

Group of orthologs #11. Best score 453 bits
Score difference with first non-orthologous sequence - C.militaris:453 M.jannaschii:453

G3JPY3              	100.00%		Q60179              	100.00%
Bootstrap support for G3JPY3 as seed ortholog is 100%.
Bootstrap support for Q60179 as seed ortholog is 100%.

Group of orthologs #12. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:167 M.jannaschii:439

G3JG68              	100.00%		Q58672              	100.00%
G3JTH8              	27.04%		
Bootstrap support for G3JG68 as seed ortholog is 99%.
Bootstrap support for Q58672 as seed ortholog is 100%.

Group of orthologs #13. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:439 M.jannaschii:439

G3JN58              	100.00%		Q60173              	100.00%
Bootstrap support for G3JN58 as seed ortholog is 100%.
Bootstrap support for Q60173 as seed ortholog is 100%.

Group of orthologs #14. Best score 432 bits
Score difference with first non-orthologous sequence - C.militaris:324 M.jannaschii:283

G3J578              	100.00%		Q57725              	100.00%
Bootstrap support for G3J578 as seed ortholog is 100%.
Bootstrap support for Q57725 as seed ortholog is 100%.

Group of orthologs #15. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:425 M.jannaschii:425

G3JAU4              	100.00%		Q57681              	100.00%
G3JGP3              	35.75%		
Bootstrap support for G3JAU4 as seed ortholog is 100%.
Bootstrap support for Q57681 as seed ortholog is 100%.

Group of orthologs #16. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:418 M.jannaschii:418

G3JM00              	100.00%		Q58536              	100.00%
Bootstrap support for G3JM00 as seed ortholog is 100%.
Bootstrap support for Q58536 as seed ortholog is 100%.

Group of orthologs #17. Best score 411 bits
Score difference with first non-orthologous sequence - C.militaris:30 M.jannaschii:411

G3JTQ3              	100.00%		Q58405              	100.00%
Bootstrap support for G3JTQ3 as seed ortholog is 71%.
Alternative seed ortholog is G3JHM0 (30 bits away from this cluster)
Bootstrap support for Q58405 as seed ortholog is 100%.

Group of orthologs #18. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:404 M.jannaschii:404

G3JFT1              	100.00%		Q58574              	100.00%
Bootstrap support for G3JFT1 as seed ortholog is 100%.
Bootstrap support for Q58574 as seed ortholog is 100%.

Group of orthologs #19. Best score 389 bits
Score difference with first non-orthologous sequence - C.militaris:322 M.jannaschii:389

G3J2N7              	100.00%		Q58050              	100.00%
Bootstrap support for G3J2N7 as seed ortholog is 99%.
Bootstrap support for Q58050 as seed ortholog is 100%.

Group of orthologs #20. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:257 M.jannaschii:383

G3JKE0              	100.00%		Q58657              	100.00%
Bootstrap support for G3JKE0 as seed ortholog is 100%.
Bootstrap support for Q58657 as seed ortholog is 100%.

Group of orthologs #21. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 M.jannaschii:369

G3JAP4              	100.00%		Q58626              	100.00%
Bootstrap support for G3JAP4 as seed ortholog is 100%.
Bootstrap support for Q58626 as seed ortholog is 100%.

Group of orthologs #22. Best score 365 bits
Score difference with first non-orthologous sequence - C.militaris:365 M.jannaschii:365

G3JCS6              	100.00%		Q57710              	100.00%
Bootstrap support for G3JCS6 as seed ortholog is 100%.
Bootstrap support for Q57710 as seed ortholog is 100%.

Group of orthologs #23. Best score 364 bits
Score difference with first non-orthologous sequence - C.militaris:16 M.jannaschii:214

G3JLY6              	100.00%		Q58576              	100.00%
Bootstrap support for G3JLY6 as seed ortholog is 79%.
Bootstrap support for Q58576 as seed ortholog is 100%.

Group of orthologs #24. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:129 M.jannaschii:339

G3JHT4              	100.00%		Q58424              	100.00%
Bootstrap support for G3JHT4 as seed ortholog is 99%.
Bootstrap support for Q58424 as seed ortholog is 100%.

Group of orthologs #25. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:331 M.jannaschii:331

G3JBK2              	100.00%		Q58090              	100.00%
Bootstrap support for G3JBK2 as seed ortholog is 100%.
Bootstrap support for Q58090 as seed ortholog is 100%.

Group of orthologs #26. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 M.jannaschii:166

G3JIR9              	100.00%		Q57565              	100.00%
Bootstrap support for G3JIR9 as seed ortholog is 100%.
Bootstrap support for Q57565 as seed ortholog is 100%.

Group of orthologs #27. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:325 M.jannaschii:325

G3JMA0              	100.00%		Q58783              	100.00%
Bootstrap support for G3JMA0 as seed ortholog is 100%.
Bootstrap support for Q58783 as seed ortholog is 100%.

Group of orthologs #28. Best score 318 bits
Score difference with first non-orthologous sequence - C.militaris:318 M.jannaschii:318

G3J7G2              	100.00%		Q58722              	100.00%
G3JQJ1              	11.03%		
Bootstrap support for G3J7G2 as seed ortholog is 100%.
Bootstrap support for Q58722 as seed ortholog is 100%.

Group of orthologs #29. Best score 315 bits
Score difference with first non-orthologous sequence - C.militaris:131 M.jannaschii:315

G3JKE8              	100.00%		Q58413              	100.00%
Bootstrap support for G3JKE8 as seed ortholog is 97%.
Bootstrap support for Q58413 as seed ortholog is 100%.

Group of orthologs #30. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:194 M.jannaschii:312

G3J9B6              	100.00%		Q60356              	100.00%
Bootstrap support for G3J9B6 as seed ortholog is 99%.
Bootstrap support for Q60356 as seed ortholog is 100%.

Group of orthologs #31. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:50 M.jannaschii:226

G3JSS1              	100.00%		Q58131              	100.00%
Bootstrap support for G3JSS1 as seed ortholog is 90%.
Bootstrap support for Q58131 as seed ortholog is 100%.

Group of orthologs #32. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 M.jannaschii:294

G3JJM0              	100.00%		Q59011              	100.00%
Bootstrap support for G3JJM0 as seed ortholog is 100%.
Bootstrap support for Q59011 as seed ortholog is 100%.

Group of orthologs #33. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:3 M.jannaschii:290

G3J4B3              	100.00%		Q59037              	100.00%
Bootstrap support for G3J4B3 as seed ortholog is 54%.
Alternative seed ortholog is G3J2U8 (3 bits away from this cluster)
Bootstrap support for Q59037 as seed ortholog is 100%.

Group of orthologs #34. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 M.jannaschii:289

G3J9P8              	100.00%		Q58628              	100.00%
G3J8E7              	40.93%		
Bootstrap support for G3J9P8 as seed ortholog is 100%.
Bootstrap support for Q58628 as seed ortholog is 100%.

Group of orthologs #35. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:206 M.jannaschii:285

G3JCW8              	100.00%		Q58530              	100.00%
Bootstrap support for G3JCW8 as seed ortholog is 100%.
Bootstrap support for Q58530 as seed ortholog is 100%.

Group of orthologs #36. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 M.jannaschii:284

G3JA18              	100.00%		Q57658              	100.00%
Bootstrap support for G3JA18 as seed ortholog is 100%.
Bootstrap support for Q57658 as seed ortholog is 100%.

Group of orthologs #37. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 M.jannaschii:279

G3JPH6              	100.00%		Q58201              	100.00%
G3J9N3              	43.99%		
Bootstrap support for G3JPH6 as seed ortholog is 100%.
Bootstrap support for Q58201 as seed ortholog is 100%.

Group of orthologs #38. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 M.jannaschii:275

G3J7R4              	100.00%		Q58575              	100.00%
Bootstrap support for G3J7R4 as seed ortholog is 100%.
Bootstrap support for Q58575 as seed ortholog is 100%.

Group of orthologs #39. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 M.jannaschii:274

G3JEJ4              	100.00%		Q58224              	100.00%
Bootstrap support for G3JEJ4 as seed ortholog is 100%.
Bootstrap support for Q58224 as seed ortholog is 100%.

Group of orthologs #40. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:160 M.jannaschii:269

G3J6W3              	100.00%		Q58635              	100.00%
Bootstrap support for G3J6W3 as seed ortholog is 99%.
Bootstrap support for Q58635 as seed ortholog is 100%.

Group of orthologs #41. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 M.jannaschii:269

G3JDS9              	100.00%		Q58425              	100.00%
Bootstrap support for G3JDS9 as seed ortholog is 100%.
Bootstrap support for Q58425 as seed ortholog is 100%.

Group of orthologs #42. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 M.jannaschii:265

G3JQM1              	100.00%		Q57612              	100.00%
Bootstrap support for G3JQM1 as seed ortholog is 100%.
Bootstrap support for Q57612 as seed ortholog is 100%.

Group of orthologs #43. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 M.jannaschii:260

G3JUU8              	100.00%		Q60175              	100.00%
Bootstrap support for G3JUU8 as seed ortholog is 100%.
Bootstrap support for Q60175 as seed ortholog is 100%.

Group of orthologs #44. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:114 M.jannaschii:255

G3J6C1              	100.00%		Q58659              	100.00%
Bootstrap support for G3J6C1 as seed ortholog is 98%.
Bootstrap support for Q58659 as seed ortholog is 100%.

Group of orthologs #45. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:149 M.jannaschii:254

G3JJ96              	100.00%		Q57911              	100.00%
Bootstrap support for G3JJ96 as seed ortholog is 99%.
Bootstrap support for Q57911 as seed ortholog is 100%.

Group of orthologs #46. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:254 M.jannaschii:254

G3JSB2              	100.00%		Q58475              	100.00%
Bootstrap support for G3JSB2 as seed ortholog is 100%.
Bootstrap support for Q58475 as seed ortholog is 100%.

Group of orthologs #47. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:166 M.jannaschii:252

G3JJS4              	100.00%		Q58900              	100.00%
Bootstrap support for G3JJS4 as seed ortholog is 99%.
Bootstrap support for Q58900 as seed ortholog is 100%.

Group of orthologs #48. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:185 M.jannaschii:250

G3J4J1              	100.00%		Q58728              	100.00%
Bootstrap support for G3J4J1 as seed ortholog is 100%.
Bootstrap support for Q58728 as seed ortholog is 100%.

Group of orthologs #49. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:64 M.jannaschii:247

G3JHW4              	100.00%		Q58806              	100.00%
G3JNC3              	28.64%		
G3JRP1              	22.75%		
G3J476              	8.43%		
G3JH11              	5.77%		
G3JJL2              	5.77%		
G3J6L6              	5.08%		
Bootstrap support for G3JHW4 as seed ortholog is 92%.
Bootstrap support for Q58806 as seed ortholog is 100%.

Group of orthologs #50. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:247 M.jannaschii:247

G3JBF3              	100.00%		Q58531              	100.00%
Bootstrap support for G3JBF3 as seed ortholog is 100%.
Bootstrap support for Q58531 as seed ortholog is 100%.

Group of orthologs #51. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 M.jannaschii:242

G3J9I1              	100.00%		Q57645              	100.00%
Bootstrap support for G3J9I1 as seed ortholog is 100%.
Bootstrap support for Q57645 as seed ortholog is 100%.

Group of orthologs #52. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 M.jannaschii:240

G3JM20              	100.00%		Q58374              	100.00%
G3JJA9              	47.93%		
Bootstrap support for G3JM20 as seed ortholog is 100%.
Bootstrap support for Q58374 as seed ortholog is 100%.

Group of orthologs #53. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:15 M.jannaschii:239

G3JIB1              	100.00%		Q58130              	100.00%
                    	       		Q58991              	15.27%
Bootstrap support for G3JIB1 as seed ortholog is 66%.
Alternative seed ortholog is G3JDX3 (15 bits away from this cluster)
Bootstrap support for Q58130 as seed ortholog is 100%.

Group of orthologs #54. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 M.jannaschii:168

G3JL28              	100.00%		Q49593              	100.00%
Bootstrap support for G3JL28 as seed ortholog is 100%.
Bootstrap support for Q49593 as seed ortholog is 99%.

Group of orthologs #55. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 M.jannaschii:237

G3J7A9              	100.00%		Q60178              	100.00%
Bootstrap support for G3J7A9 as seed ortholog is 100%.
Bootstrap support for Q60178 as seed ortholog is 100%.

Group of orthologs #56. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 M.jannaschii:237

G3JLN9              	100.00%		Q58815              	100.00%
Bootstrap support for G3JLN9 as seed ortholog is 100%.
Bootstrap support for Q58815 as seed ortholog is 100%.

Group of orthologs #57. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:7 M.jannaschii:168

G3J4Y8              	100.00%		Q58083              	100.00%
G3JP92              	52.76%		
Bootstrap support for G3J4Y8 as seed ortholog is 40%.
Alternative seed ortholog is G3JUA9 (7 bits away from this cluster)
Bootstrap support for Q58083 as seed ortholog is 99%.

Group of orthologs #58. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 M.jannaschii:234

G3JS46              	100.00%		Q57657              	100.00%
Bootstrap support for G3JS46 as seed ortholog is 100%.
Bootstrap support for Q57657 as seed ortholog is 100%.

Group of orthologs #59. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:83 M.jannaschii:152

G3JR03              	100.00%		Q57731              	100.00%
Bootstrap support for G3JR03 as seed ortholog is 99%.
Bootstrap support for Q57731 as seed ortholog is 99%.

Group of orthologs #60. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 M.jannaschii:232

G3JPQ0              	100.00%		Q58508              	100.00%
Bootstrap support for G3JPQ0 as seed ortholog is 100%.
Bootstrap support for Q58508 as seed ortholog is 100%.

Group of orthologs #61. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:38 M.jannaschii:230

G3JDY3              	100.00%		P81291              	100.00%
                    	       		Q58409              	26.97%
Bootstrap support for G3JDY3 as seed ortholog is 81%.
Bootstrap support for P81291 as seed ortholog is 100%.

Group of orthologs #62. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 M.jannaschii:228

G3JLZ6              	100.00%		Q58643              	100.00%
G3JH43              	10.02%		
Bootstrap support for G3JLZ6 as seed ortholog is 100%.
Bootstrap support for Q58643 as seed ortholog is 100%.

Group of orthologs #63. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 M.jannaschii:226

G3JS01              	100.00%		Q57772              	100.00%
G3JKP9              	36.04%		
Bootstrap support for G3JS01 as seed ortholog is 100%.
Bootstrap support for Q57772 as seed ortholog is 100%.

Group of orthologs #64. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 M.jannaschii:225

G3J9K3              	100.00%		Q60174              	100.00%
Bootstrap support for G3J9K3 as seed ortholog is 100%.
Bootstrap support for Q60174 as seed ortholog is 100%.

Group of orthologs #65. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 M.jannaschii:222

G3JKH6              	100.00%		Q58884              	100.00%
G3J3Y9              	10.37%		Q58371              	23.71%
G3JJH0              	8.79%		Q57809              	18.81%
G3J9F0              	7.56%		Q60275              	7.66%
G3JCP4              	5.91%		
G3JKV2              	5.19%		
Bootstrap support for G3JKH6 as seed ortholog is 100%.
Bootstrap support for Q58884 as seed ortholog is 100%.

Group of orthologs #66. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 M.jannaschii:220

G3JSY5              	100.00%		Q57663              	100.00%
Bootstrap support for G3JSY5 as seed ortholog is 100%.
Bootstrap support for Q57663 as seed ortholog is 100%.

Group of orthologs #67. Best score 213 bits
Score difference with first non-orthologous sequence - C.militaris:213 M.jannaschii:213

G3JPB1              	100.00%		Q58772              	100.00%
G3JBP4              	39.82%		
Bootstrap support for G3JPB1 as seed ortholog is 100%.
Bootstrap support for Q58772 as seed ortholog is 100%.

Group of orthologs #68. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 M.jannaschii:212

G3JBE2              	100.00%		Q58239              	100.00%
Bootstrap support for G3JBE2 as seed ortholog is 100%.
Bootstrap support for Q58239 as seed ortholog is 100%.

Group of orthologs #69. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 M.jannaschii:210

G3JSB5              	100.00%		P54014              	100.00%
Bootstrap support for G3JSB5 as seed ortholog is 100%.
Bootstrap support for P54014 as seed ortholog is 100%.

Group of orthologs #70. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 M.jannaschii:209

G3JHG2              	100.00%		Q58820              	100.00%
Bootstrap support for G3JHG2 as seed ortholog is 100%.
Bootstrap support for Q58820 as seed ortholog is 100%.

Group of orthologs #71. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:96 M.jannaschii:208

G3JHE0              	100.00%		Q58347              	100.00%
Bootstrap support for G3JHE0 as seed ortholog is 98%.
Bootstrap support for Q58347 as seed ortholog is 100%.

Group of orthologs #72. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 M.jannaschii:206

G3J6J9              	100.00%		Q58454              	100.00%
Bootstrap support for G3J6J9 as seed ortholog is 100%.
Bootstrap support for Q58454 as seed ortholog is 100%.

Group of orthologs #73. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:114 M.jannaschii:205

G3JBD9              	100.00%		P54017              	100.00%
Bootstrap support for G3JBD9 as seed ortholog is 99%.
Bootstrap support for P54017 as seed ortholog is 100%.

Group of orthologs #74. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 M.jannaschii:205

G3JT79              	100.00%		Q58058              	100.00%
Bootstrap support for G3JT79 as seed ortholog is 100%.
Bootstrap support for Q58058 as seed ortholog is 100%.

Group of orthologs #75. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:204 M.jannaschii:204

G3JJY0              	100.00%		Q57984              	100.00%
Bootstrap support for G3JJY0 as seed ortholog is 100%.
Bootstrap support for Q57984 as seed ortholog is 100%.

Group of orthologs #76. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:31 M.jannaschii:202

G3J9Q3              	100.00%		Q58950              	100.00%
G3J871              	10.14%		
Bootstrap support for G3J9Q3 as seed ortholog is 73%.
Alternative seed ortholog is G3JS81 (31 bits away from this cluster)
Bootstrap support for Q58950 as seed ortholog is 100%.

Group of orthologs #77. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:115 M.jannaschii:201

G3JIA0              	100.00%		Q58595              	100.00%
                    	       		Q58787              	37.89%
                    	       		Q57926              	22.08%
Bootstrap support for G3JIA0 as seed ortholog is 99%.
Bootstrap support for Q58595 as seed ortholog is 100%.

Group of orthologs #78. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 M.jannaschii:201

G3JIK5              	100.00%		Q57572              	100.00%
Bootstrap support for G3JIK5 as seed ortholog is 100%.
Bootstrap support for Q57572 as seed ortholog is 100%.

Group of orthologs #79. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 M.jannaschii:76

G3J6F1              	100.00%		Q57896              	100.00%
Bootstrap support for G3J6F1 as seed ortholog is 100%.
Bootstrap support for Q57896 as seed ortholog is 96%.

Group of orthologs #80. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 M.jannaschii:198

G3JNP9              	100.00%		Q58542              	100.00%
Bootstrap support for G3JNP9 as seed ortholog is 100%.
Bootstrap support for Q58542 as seed ortholog is 100%.

Group of orthologs #81. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:11 M.jannaschii:197

G3J6M2              	100.00%		Q60177              	100.00%
Bootstrap support for G3J6M2 as seed ortholog is 76%.
Bootstrap support for Q60177 as seed ortholog is 100%.

Group of orthologs #82. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 M.jannaschii:194

G3J7T3              	100.00%		Q57624              	100.00%
Bootstrap support for G3J7T3 as seed ortholog is 100%.
Bootstrap support for Q57624 as seed ortholog is 100%.

Group of orthologs #83. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 M.jannaschii:191

G3J4E2              	100.00%		Q58992              	100.00%
G3J605              	42.03%		
Bootstrap support for G3J4E2 as seed ortholog is 100%.
Bootstrap support for Q58992 as seed ortholog is 100%.

Group of orthologs #84. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 M.jannaschii:188

G3J4R0              	100.00%		Q58295              	100.00%
G3JMR4              	6.98%		
Bootstrap support for G3J4R0 as seed ortholog is 100%.
Bootstrap support for Q58295 as seed ortholog is 100%.

Group of orthologs #85. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:83 M.jannaschii:188

G3JRD1              	100.00%		Q58105              	100.00%
G3J4B0              	11.69%		
Bootstrap support for G3JRD1 as seed ortholog is 99%.
Bootstrap support for Q58105 as seed ortholog is 100%.

Group of orthologs #86. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 M.jannaschii:185

G3J4T3              	100.00%		Q57761              	100.00%
Bootstrap support for G3J4T3 as seed ortholog is 100%.
Bootstrap support for Q57761 as seed ortholog is 100%.

Group of orthologs #87. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 M.jannaschii:116

G3JSA1              	100.00%		Q58291              	100.00%
Bootstrap support for G3JSA1 as seed ortholog is 100%.
Bootstrap support for Q58291 as seed ortholog is 99%.

Group of orthologs #88. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:53 M.jannaschii:184

G3JII2              	100.00%		Q58560              	100.00%
Bootstrap support for G3JII2 as seed ortholog is 86%.
Bootstrap support for Q58560 as seed ortholog is 100%.

Group of orthologs #89. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 M.jannaschii:181

G3JE10              	100.00%		Q58670              	100.00%
Bootstrap support for G3JE10 as seed ortholog is 100%.
Bootstrap support for Q58670 as seed ortholog is 100%.

Group of orthologs #90. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 M.jannaschii:180

G3JGN6              	100.00%		Q57854              	100.00%
Bootstrap support for G3JGN6 as seed ortholog is 100%.
Bootstrap support for Q57854 as seed ortholog is 100%.

Group of orthologs #91. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:121 M.jannaschii:178

G3J9Z3              	100.00%		Q58944              	100.00%
G3JQQ6              	49.20%		
Bootstrap support for G3J9Z3 as seed ortholog is 99%.
Bootstrap support for Q58944 as seed ortholog is 100%.

Group of orthologs #92. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 M.jannaschii:178

G3J301              	100.00%		P54063              	100.00%
Bootstrap support for G3J301 as seed ortholog is 100%.
Bootstrap support for P54063 as seed ortholog is 100%.

Group of orthologs #93. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:80 M.jannaschii:178

G3JBP2              	100.00%		Q58936              	100.00%
Bootstrap support for G3JBP2 as seed ortholog is 96%.
Bootstrap support for Q58936 as seed ortholog is 100%.

Group of orthologs #94. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 M.jannaschii:176

G3JGR9              	100.00%		Q58839              	100.00%
Bootstrap support for G3JGR9 as seed ortholog is 100%.
Bootstrap support for Q58839 as seed ortholog is 100%.

Group of orthologs #95. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 M.jannaschii:175

G3JCZ7              	100.00%		Q57991              	100.00%
Bootstrap support for G3JCZ7 as seed ortholog is 100%.
Bootstrap support for Q57991 as seed ortholog is 100%.

Group of orthologs #96. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 M.jannaschii:173

G3JEL3              	100.00%		Q58633              	100.00%
                    	       		Q57626              	11.41%
                    	       		Q60355              	5.29%
Bootstrap support for G3JEL3 as seed ortholog is 100%.
Bootstrap support for Q58633 as seed ortholog is 100%.

Group of orthologs #97. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 M.jannaschii:173

G3J2R4              	100.00%		Q57635              	100.00%
G3J461              	12.92%		
Bootstrap support for G3J2R4 as seed ortholog is 100%.
Bootstrap support for Q57635 as seed ortholog is 100%.

Group of orthologs #98. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 M.jannaschii:173

G3JEF2              	100.00%		Q58803              	100.00%
Bootstrap support for G3JEF2 as seed ortholog is 100%.
Bootstrap support for Q58803 as seed ortholog is 100%.

Group of orthologs #99. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 M.jannaschii:172

G3JEW1              	100.00%		P54060              	100.00%
Bootstrap support for G3JEW1 as seed ortholog is 100%.
Bootstrap support for P54060 as seed ortholog is 100%.

Group of orthologs #100. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 M.jannaschii:170

G3JKQ3              	100.00%		Q58108              	100.00%
Bootstrap support for G3JKQ3 as seed ortholog is 100%.
Bootstrap support for Q58108 as seed ortholog is 100%.

Group of orthologs #101. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 M.jannaschii:169

G3JKX6              	100.00%		Q57981              	100.00%
G3JQS5              	41.82%		
Bootstrap support for G3JKX6 as seed ortholog is 100%.
Bootstrap support for Q57981 as seed ortholog is 100%.

Group of orthologs #102. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 M.jannaschii:169

G3JF68              	100.00%		Q57834              	100.00%
Bootstrap support for G3JF68 as seed ortholog is 100%.
Bootstrap support for Q57834 as seed ortholog is 100%.

Group of orthologs #103. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:108 M.jannaschii:168

G3JRC2              	100.00%		Q58725              	100.00%
G3J6I1              	36.74%		
Bootstrap support for G3JRC2 as seed ortholog is 99%.
Bootstrap support for Q58725 as seed ortholog is 100%.

Group of orthologs #104. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:116 M.jannaschii:168

G3JHE3              	100.00%		Q58810              	100.00%
Bootstrap support for G3JHE3 as seed ortholog is 99%.
Bootstrap support for Q58810 as seed ortholog is 100%.

Group of orthologs #105. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 M.jannaschii:166

G3JBZ5              	100.00%		Q58938              	100.00%
Bootstrap support for G3JBZ5 as seed ortholog is 100%.
Bootstrap support for Q58938 as seed ortholog is 100%.

Group of orthologs #106. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:15 M.jannaschii:81

G3J3B2              	100.00%		Q58696              	100.00%
Bootstrap support for G3J3B2 as seed ortholog is 62%.
Alternative seed ortholog is G3JMI1 (15 bits away from this cluster)
Bootstrap support for Q58696 as seed ortholog is 96%.

Group of orthologs #107. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 M.jannaschii:163

G3JEK6              	100.00%		Q58767              	100.00%
Bootstrap support for G3JEK6 as seed ortholog is 100%.
Bootstrap support for Q58767 as seed ortholog is 100%.

Group of orthologs #108. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 M.jannaschii:49

G3JKF0              	100.00%		Q58524              	100.00%
Bootstrap support for G3JKF0 as seed ortholog is 100%.
Bootstrap support for Q58524 as seed ortholog is 79%.

Group of orthologs #109. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:28 M.jannaschii:162

G3JLE0              	100.00%		Q59050              	100.00%
G3J6D5              	9.61%		
Bootstrap support for G3JLE0 as seed ortholog is 78%.
Bootstrap support for Q59050 as seed ortholog is 100%.

Group of orthologs #110. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 M.jannaschii:162

G3J7X2              	100.00%		Q59046              	100.00%
Bootstrap support for G3J7X2 as seed ortholog is 100%.
Bootstrap support for Q59046 as seed ortholog is 100%.

Group of orthologs #111. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 M.jannaschii:159

G3JJT7              	100.00%		Q58496              	100.00%
Bootstrap support for G3JJT7 as seed ortholog is 100%.
Bootstrap support for Q58496 as seed ortholog is 100%.

Group of orthologs #112. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:3 M.jannaschii:156

G3J5D6              	100.00%		Q58694              	100.00%
Bootstrap support for G3J5D6 as seed ortholog is 48%.
Alternative seed ortholog is G3JRW8 (3 bits away from this cluster)
Bootstrap support for Q58694 as seed ortholog is 100%.

Group of orthologs #113. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 M.jannaschii:156

G3JK80              	100.00%		P54045              	100.00%
Bootstrap support for G3JK80 as seed ortholog is 100%.
Bootstrap support for P54045 as seed ortholog is 100%.

Group of orthologs #114. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 M.jannaschii:154

G3JC76              	100.00%		Q58715              	100.00%
Bootstrap support for G3JC76 as seed ortholog is 100%.
Bootstrap support for Q58715 as seed ortholog is 100%.

Group of orthologs #115. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 M.jannaschii:153

G3J751              	100.00%		Q57689              	100.00%
Bootstrap support for G3J751 as seed ortholog is 100%.
Bootstrap support for Q57689 as seed ortholog is 100%.

Group of orthologs #116. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:96 M.jannaschii:153

G3JRJ1              	100.00%		Q58414              	100.00%
Bootstrap support for G3JRJ1 as seed ortholog is 99%.
Bootstrap support for Q58414 as seed ortholog is 100%.

Group of orthologs #117. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:59 M.jannaschii:151

G3J5K7              	100.00%		Q58516              	100.00%
Bootstrap support for G3J5K7 as seed ortholog is 83%.
Bootstrap support for Q58516 as seed ortholog is 100%.

Group of orthologs #118. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 M.jannaschii:151

G3J8N0              	100.00%		P54012              	100.00%
Bootstrap support for G3J8N0 as seed ortholog is 100%.
Bootstrap support for P54012 as seed ortholog is 100%.

Group of orthologs #119. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 M.jannaschii:151

G3JRC8              	100.00%		P54109              	100.00%
Bootstrap support for G3JRC8 as seed ortholog is 100%.
Bootstrap support for P54109 as seed ortholog is 100%.

Group of orthologs #120. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 M.jannaschii:149

G3JD38              	100.00%		Q58296              	100.00%
                    	       		Q58080              	9.71%
Bootstrap support for G3JD38 as seed ortholog is 100%.
Bootstrap support for Q58296 as seed ortholog is 100%.

Group of orthologs #121. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 M.jannaschii:149

G3JJ69              	100.00%		P54040              	100.00%
Bootstrap support for G3JJ69 as seed ortholog is 100%.
Bootstrap support for P54040 as seed ortholog is 100%.

Group of orthologs #122. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:99 M.jannaschii:148

G3JH75              	100.00%		Q58339              	100.00%
Bootstrap support for G3JH75 as seed ortholog is 99%.
Bootstrap support for Q58339 as seed ortholog is 100%.

Group of orthologs #123. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 M.jannaschii:148

G3JPX2              	100.00%		P54062              	100.00%
Bootstrap support for G3JPX2 as seed ortholog is 100%.
Bootstrap support for P54062 as seed ortholog is 100%.

Group of orthologs #124. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 M.jannaschii:87

G3JF46              	100.00%		Q58558              	100.00%
Bootstrap support for G3JF46 as seed ortholog is 100%.
Bootstrap support for Q58558 as seed ortholog is 99%.

Group of orthologs #125. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:106 M.jannaschii:101

G3JJM2              	100.00%		Q58931              	100.00%
Bootstrap support for G3JJM2 as seed ortholog is 99%.
Bootstrap support for Q58931 as seed ortholog is 99%.

Group of orthologs #126. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 M.jannaschii:144

G3JNC8              	100.00%		Q58146              	100.00%
Bootstrap support for G3JNC8 as seed ortholog is 100%.
Bootstrap support for Q58146 as seed ortholog is 100%.

Group of orthologs #127. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 M.jannaschii:143

G3J2L0              	100.00%		Q58369              	100.00%
Bootstrap support for G3J2L0 as seed ortholog is 100%.
Bootstrap support for Q58369 as seed ortholog is 100%.

Group of orthologs #128. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 M.jannaschii:143

G3J993              	100.00%		Q58406              	100.00%
Bootstrap support for G3J993 as seed ortholog is 100%.
Bootstrap support for Q58406 as seed ortholog is 100%.

Group of orthologs #129. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:87 M.jannaschii:142

G3JGY3              	100.00%		Q60182              	100.00%
Bootstrap support for G3JGY3 as seed ortholog is 97%.
Bootstrap support for Q60182 as seed ortholog is 100%.

Group of orthologs #130. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 M.jannaschii:141

G3J8Q7              	100.00%		Q57935              	100.00%
                    	       		Q58433              	12.03%
Bootstrap support for G3J8Q7 as seed ortholog is 100%.
Bootstrap support for Q57935 as seed ortholog is 100%.

Group of orthologs #131. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 M.jannaschii:141

G3J5Z8              	100.00%		P54021              	100.00%
Bootstrap support for G3J5Z8 as seed ortholog is 100%.
Bootstrap support for P54021 as seed ortholog is 100%.

Group of orthologs #132. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 M.jannaschii:140

G3JU78              	100.00%		Q57989              	100.00%
G3J7Z9              	11.48%		
Bootstrap support for G3JU78 as seed ortholog is 100%.
Bootstrap support for Q57989 as seed ortholog is 100%.

Group of orthologs #133. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 M.jannaschii:139

G3J9R5              	100.00%		P54039              	100.00%
Bootstrap support for G3J9R5 as seed ortholog is 100%.
Bootstrap support for P54039 as seed ortholog is 100%.

Group of orthologs #134. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 M.jannaschii:139

G3JCV9              	100.00%		Q57686              	100.00%
Bootstrap support for G3JCV9 as seed ortholog is 100%.
Bootstrap support for Q57686 as seed ortholog is 100%.

Group of orthologs #135. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 M.jannaschii:138

G3JKX1              	100.00%		Q58473              	100.00%
Bootstrap support for G3JKX1 as seed ortholog is 100%.
Bootstrap support for Q58473 as seed ortholog is 100%.

Group of orthologs #136. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 M.jannaschii:138

G3JPL9              	100.00%		Q57568              	100.00%
Bootstrap support for G3JPL9 as seed ortholog is 100%.
Bootstrap support for Q57568 as seed ortholog is 100%.

Group of orthologs #137. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:22 M.jannaschii:137

G3JF32              	100.00%		Q59056              	100.00%
G3JS47              	42.33%		Q58639              	11.70%
G3JBN0              	17.65%		
Bootstrap support for G3JF32 as seed ortholog is 69%.
Alternative seed ortholog is G3JIJ9 (22 bits away from this cluster)
Bootstrap support for Q59056 as seed ortholog is 100%.

Group of orthologs #138. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 M.jannaschii:137

G3JA52              	100.00%		Q59020              	100.00%
Bootstrap support for G3JA52 as seed ortholog is 100%.
Bootstrap support for Q59020 as seed ortholog is 100%.

Group of orthologs #139. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:91 M.jannaschii:137

G3JHE1              	100.00%		P54019              	100.00%
Bootstrap support for G3JHE1 as seed ortholog is 99%.
Bootstrap support for P54019 as seed ortholog is 100%.

Group of orthologs #140. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 M.jannaschii:137

G3JKF4              	100.00%		P54049              	100.00%
Bootstrap support for G3JKF4 as seed ortholog is 100%.
Bootstrap support for P54049 as seed ortholog is 100%.

Group of orthologs #141. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:54 M.jannaschii:134

G3JPG2              	100.00%		Q60176              	100.00%
Bootstrap support for G3JPG2 as seed ortholog is 92%.
Bootstrap support for Q60176 as seed ortholog is 100%.

Group of orthologs #142. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 M.jannaschii:132

G3JCJ5              	100.00%		Q57638              	100.00%
Bootstrap support for G3JCJ5 as seed ortholog is 100%.
Bootstrap support for Q57638 as seed ortholog is 100%.

Group of orthologs #143. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 M.jannaschii:132

G3JGM5              	100.00%		Q58771              	100.00%
Bootstrap support for G3JGM5 as seed ortholog is 100%.
Bootstrap support for Q58771 as seed ortholog is 100%.

Group of orthologs #144. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 M.jannaschii:131

G3J8W6              	100.00%		Q58109              	100.00%
Bootstrap support for G3J8W6 as seed ortholog is 100%.
Bootstrap support for Q58109 as seed ortholog is 100%.

Group of orthologs #145. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 M.jannaschii:130

G3JCW0              	100.00%		Q58192              	100.00%
Bootstrap support for G3JCW0 as seed ortholog is 100%.
Bootstrap support for Q58192 as seed ortholog is 100%.

Group of orthologs #146. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 M.jannaschii:129

G3J8Y1              	100.00%		P54018              	100.00%
Bootstrap support for G3J8Y1 as seed ortholog is 100%.
Bootstrap support for P54018 as seed ortholog is 100%.

Group of orthologs #147. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:52 M.jannaschii:129

G3JLM6              	100.00%		Q58859              	100.00%
Bootstrap support for G3JLM6 as seed ortholog is 90%.
Bootstrap support for Q58859 as seed ortholog is 100%.

Group of orthologs #148. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 M.jannaschii:128

G3JGR5              	100.00%		P54015              	100.00%
Bootstrap support for G3JGR5 as seed ortholog is 100%.
Bootstrap support for P54015 as seed ortholog is 100%.

Group of orthologs #149. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 M.jannaschii:128

G3JN75              	100.00%		Q58601              	100.00%
Bootstrap support for G3JN75 as seed ortholog is 100%.
Bootstrap support for Q58601 as seed ortholog is 100%.

Group of orthologs #150. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 M.jannaschii:128

G3JSZ3              	100.00%		Q58030              	100.00%
Bootstrap support for G3JSZ3 as seed ortholog is 100%.
Bootstrap support for Q58030 as seed ortholog is 100%.

Group of orthologs #151. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 M.jannaschii:127

G3JT32              	100.00%		Q58739              	100.00%
G3JJK6              	36.63%		Q60366              	24.48%
Bootstrap support for G3JT32 as seed ortholog is 100%.
Bootstrap support for Q58739 as seed ortholog is 100%.

Group of orthologs #152. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:72 M.jannaschii:127

G3J7Q8              	100.00%		Q57757              	100.00%
Bootstrap support for G3J7Q8 as seed ortholog is 85%.
Bootstrap support for Q57757 as seed ortholog is 100%.

Group of orthologs #153. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 M.jannaschii:127

G3JN97              	100.00%		Q58086              	100.00%
Bootstrap support for G3JN97 as seed ortholog is 100%.
Bootstrap support for Q58086 as seed ortholog is 100%.

Group of orthologs #154. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 M.jannaschii:126

G3JIG1              	100.00%		Q57916              	100.00%
Bootstrap support for G3JIG1 as seed ortholog is 100%.
Bootstrap support for Q57916 as seed ortholog is 100%.

Group of orthologs #155. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:21 M.jannaschii:125

G3JQ81              	100.00%		Q57664              	100.00%
                    	       		Q58455              	8.32%
Bootstrap support for G3JQ81 as seed ortholog is 67%.
Alternative seed ortholog is G3J2S8 (21 bits away from this cluster)
Bootstrap support for Q57664 as seed ortholog is 100%.

Group of orthologs #156. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:60 M.jannaschii:124

G3JE70              	100.00%		Q58172              	100.00%
                    	       		Q57996              	83.51%
Bootstrap support for G3JE70 as seed ortholog is 93%.
Bootstrap support for Q58172 as seed ortholog is 100%.

Group of orthologs #157. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 M.jannaschii:124

G3JHY4              	100.00%		Q57697              	100.00%
Bootstrap support for G3JHY4 as seed ortholog is 100%.
Bootstrap support for Q57697 as seed ortholog is 100%.

Group of orthologs #158. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 M.jannaschii:124

G3JPP8              	100.00%		P54034              	100.00%
Bootstrap support for G3JPP8 as seed ortholog is 100%.
Bootstrap support for P54034 as seed ortholog is 100%.

Group of orthologs #159. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:39 M.jannaschii:37

G3JST8              	100.00%		Q60317              	100.00%
                    	       		Q58097              	24.92%
Bootstrap support for G3JST8 as seed ortholog is 83%.
Bootstrap support for Q60317 as seed ortholog is 79%.

Group of orthologs #160. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 M.jannaschii:123

G3JGA2              	100.00%		Q57930              	100.00%
Bootstrap support for G3JGA2 as seed ortholog is 100%.
Bootstrap support for Q57930 as seed ortholog is 100%.

Group of orthologs #161. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 M.jannaschii:121

G3J597              	100.00%		P54041              	100.00%
Bootstrap support for G3J597 as seed ortholog is 100%.
Bootstrap support for P54041 as seed ortholog is 100%.

Group of orthologs #162. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 M.jannaschii:119

G3JCW4              	100.00%		Q60331              	100.00%
Bootstrap support for G3JCW4 as seed ortholog is 100%.
Bootstrap support for Q60331 as seed ortholog is 100%.

Group of orthologs #163. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 M.jannaschii:118

G3JGM3              	100.00%		Q58761              	100.00%
G3JA59              	35.87%		
Bootstrap support for G3JGM3 as seed ortholog is 100%.
Bootstrap support for Q58761 as seed ortholog is 100%.

Group of orthologs #164. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:23 M.jannaschii:117

G3J4C0              	100.00%		Q58270              	100.00%
Bootstrap support for G3J4C0 as seed ortholog is 79%.
Bootstrap support for Q58270 as seed ortholog is 100%.

Group of orthologs #165. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:60 M.jannaschii:116

G3JMR6              	100.00%		P54020              	100.00%
Bootstrap support for G3JMR6 as seed ortholog is 99%.
Bootstrap support for P54020 as seed ortholog is 100%.

Group of orthologs #166. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 M.jannaschii:116

G3JRW9              	100.00%		Q58692              	100.00%
Bootstrap support for G3JRW9 as seed ortholog is 100%.
Bootstrap support for Q58692 as seed ortholog is 100%.

Group of orthologs #167. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 M.jannaschii:116

G3JUC8              	100.00%		Q58093              	100.00%
Bootstrap support for G3JUC8 as seed ortholog is 100%.
Bootstrap support for Q58093 as seed ortholog is 100%.

Group of orthologs #168. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 M.jannaschii:115

G3J3E1              	100.00%		Q58435              	100.00%
Bootstrap support for G3J3E1 as seed ortholog is 100%.
Bootstrap support for Q58435 as seed ortholog is 100%.

Group of orthologs #169. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 M.jannaschii:115

G3J681              	100.00%		Q58018              	100.00%
Bootstrap support for G3J681 as seed ortholog is 100%.
Bootstrap support for Q58018 as seed ortholog is 100%.

Group of orthologs #170. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 M.jannaschii:115

G3JGN2              	100.00%		Q57963              	100.00%
Bootstrap support for G3JGN2 as seed ortholog is 100%.
Bootstrap support for Q57963 as seed ortholog is 100%.

Group of orthologs #171. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 M.jannaschii:115

G3JR85              	100.00%		P54044              	100.00%
Bootstrap support for G3JR85 as seed ortholog is 100%.
Bootstrap support for P54044 as seed ortholog is 100%.

Group of orthologs #172. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 M.jannaschii:65

G3JE42              	100.00%		Q58365              	100.00%
Bootstrap support for G3JE42 as seed ortholog is 100%.
Bootstrap support for Q58365 as seed ortholog is 95%.

Group of orthologs #173. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:24 M.jannaschii:112

G3JNZ9              	100.00%		Q57695              	100.00%
G3J8V1              	22.31%		
G3JIT2              	21.85%		
G3JQK3              	14.15%		
Bootstrap support for G3JNZ9 as seed ortholog is 76%.
Bootstrap support for Q57695 as seed ortholog is 100%.

Group of orthologs #174. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 M.jannaschii:112

G3J6H2              	100.00%		Q58294              	100.00%
Bootstrap support for G3J6H2 as seed ortholog is 100%.
Bootstrap support for Q58294 as seed ortholog is 100%.

Group of orthologs #175. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 M.jannaschii:112

G3JD96              	100.00%		Q57679              	100.00%
Bootstrap support for G3JD96 as seed ortholog is 100%.
Bootstrap support for Q57679 as seed ortholog is 100%.

Group of orthologs #176. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 M.jannaschii:111

G3JEL2              	100.00%		Q57675              	100.00%
Bootstrap support for G3JEL2 as seed ortholog is 100%.
Bootstrap support for Q57675 as seed ortholog is 100%.

Group of orthologs #177. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 M.jannaschii:111

G3JNK1              	100.00%		Q57871              	100.00%
Bootstrap support for G3JNK1 as seed ortholog is 100%.
Bootstrap support for Q57871 as seed ortholog is 100%.

Group of orthologs #178. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 M.jannaschii:110

G3JAR8              	100.00%		P54057              	100.00%
Bootstrap support for G3JAR8 as seed ortholog is 100%.
Bootstrap support for P54057 as seed ortholog is 100%.

Group of orthologs #179. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 M.jannaschii:110

G3JBK1              	100.00%		Q59055              	100.00%
Bootstrap support for G3JBK1 as seed ortholog is 100%.
Bootstrap support for Q59055 as seed ortholog is 100%.

Group of orthologs #180. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 M.jannaschii:110

G3JPZ0              	100.00%		Q58054              	100.00%
Bootstrap support for G3JPZ0 as seed ortholog is 100%.
Bootstrap support for Q58054 as seed ortholog is 100%.

Group of orthologs #181. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 M.jannaschii:109

G3JSA0              	100.00%		Q57625              	100.00%
Bootstrap support for G3JSA0 as seed ortholog is 100%.
Bootstrap support for Q57625 as seed ortholog is 100%.

Group of orthologs #182. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 M.jannaschii:108

G3J3Q3              	100.00%		Q58032              	100.00%
Bootstrap support for G3J3Q3 as seed ortholog is 100%.
Bootstrap support for Q58032 as seed ortholog is 100%.

Group of orthologs #183. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 M.jannaschii:108

G3JPQ3              	100.00%		Q60357              	100.00%
Bootstrap support for G3JPQ3 as seed ortholog is 100%.
Bootstrap support for Q60357 as seed ortholog is 100%.

Group of orthologs #184. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:55 M.jannaschii:107

G3J3K3              	100.00%		Q58276              	100.00%
Bootstrap support for G3J3K3 as seed ortholog is 99%.
Bootstrap support for Q58276 as seed ortholog is 100%.

Group of orthologs #185. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 M.jannaschii:106

G3JFW3              	100.00%		P61159              	100.00%
                    	       		Q60314              	13.04%
Bootstrap support for G3JFW3 as seed ortholog is 100%.
Bootstrap support for P61159 as seed ortholog is 100%.

Group of orthologs #186. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 M.jannaschii:106

G3JM44              	100.00%		Q57581              	100.00%
Bootstrap support for G3JM44 as seed ortholog is 100%.
Bootstrap support for Q57581 as seed ortholog is 100%.

Group of orthologs #187. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:58 M.jannaschii:102

G3JFG0              	100.00%		Q58874              	100.00%
Bootstrap support for G3JFG0 as seed ortholog is 91%.
Bootstrap support for Q58874 as seed ortholog is 100%.

Group of orthologs #188. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 M.jannaschii:101

G3J722              	100.00%		Q60363              	100.00%
Bootstrap support for G3J722 as seed ortholog is 100%.
Bootstrap support for Q60363 as seed ortholog is 100%.

Group of orthologs #189. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:10 M.jannaschii:101

G3J999              	100.00%		Q58634              	100.00%
Bootstrap support for G3J999 as seed ortholog is 61%.
Alternative seed ortholog is G3J8P6 (10 bits away from this cluster)
Bootstrap support for Q58634 as seed ortholog is 100%.

Group of orthologs #190. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 M.jannaschii:99

G3J2R7              	100.00%		Q60358              	100.00%
Bootstrap support for G3J2R7 as seed ortholog is 100%.
Bootstrap support for Q60358 as seed ortholog is 100%.

Group of orthologs #191. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 M.jannaschii:99

G3JKQ2              	100.00%		P54033              	100.00%
Bootstrap support for G3JKQ2 as seed ortholog is 100%.
Bootstrap support for P54033 as seed ortholog is 100%.

Group of orthologs #192. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 M.jannaschii:99

G3JL31              	100.00%		P54042              	100.00%
Bootstrap support for G3JL31 as seed ortholog is 100%.
Bootstrap support for P54042 as seed ortholog is 100%.

Group of orthologs #193. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 M.jannaschii:97

G3JUB1              	100.00%		P54024              	100.00%
Bootstrap support for G3JUB1 as seed ortholog is 100%.
Bootstrap support for P54024 as seed ortholog is 100%.

Group of orthologs #194. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 M.jannaschii:96

G3J5P5              	100.00%		Q58047              	100.00%
G3JSN0              	22.70%		
G3JRT7              	19.98%		
Bootstrap support for G3J5P5 as seed ortholog is 100%.
Bootstrap support for Q58047 as seed ortholog is 100%.

Group of orthologs #195. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 M.jannaschii:96

G3JQG7              	100.00%		Q58464              	100.00%
G3JH40              	13.15%		
G3JRJ5              	8.49%		
Bootstrap support for G3JQG7 as seed ortholog is 100%.
Bootstrap support for Q58464 as seed ortholog is 100%.

Group of orthologs #196. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 M.jannaschii:94

G3J354              	100.00%		Q57936              	100.00%
                    	       		Q58758              	31.75%
Bootstrap support for G3J354 as seed ortholog is 100%.
Bootstrap support for Q57936 as seed ortholog is 100%.

Group of orthologs #197. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 M.jannaschii:94

G3J486              	100.00%		Q58998              	100.00%
Bootstrap support for G3J486 as seed ortholog is 100%.
Bootstrap support for Q58998 as seed ortholog is 100%.

Group of orthologs #198. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 M.jannaschii:93

G3JA01              	100.00%		P54038              	100.00%
Bootstrap support for G3JA01 as seed ortholog is 100%.
Bootstrap support for P54038 as seed ortholog is 100%.

Group of orthologs #199. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 M.jannaschii:93

G3JRH4              	100.00%		Q58660              	100.00%
Bootstrap support for G3JRH4 as seed ortholog is 100%.
Bootstrap support for Q58660 as seed ortholog is 100%.

Group of orthologs #200. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 M.jannaschii:92

G3JFE1              	100.00%		Q60364              	100.00%
Bootstrap support for G3JFE1 as seed ortholog is 100%.
Bootstrap support for Q60364 as seed ortholog is 100%.

Group of orthologs #201. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 M.jannaschii:91

G3JP75              	100.00%		Q58487              	100.00%
Bootstrap support for G3JP75 as seed ortholog is 100%.
Bootstrap support for Q58487 as seed ortholog is 100%.

Group of orthologs #202. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 M.jannaschii:89

G3JN64              	100.00%		Q57955              	100.00%
G3J7K8              	28.21%		
Bootstrap support for G3JN64 as seed ortholog is 100%.
Bootstrap support for Q57955 as seed ortholog is 100%.

Group of orthologs #203. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 M.jannaschii:89

G3JLF5              	100.00%		Q58597              	100.00%
G3J778              	18.28%		
Bootstrap support for G3JLF5 as seed ortholog is 100%.
Bootstrap support for Q58597 as seed ortholog is 100%.

Group of orthologs #204. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 M.jannaschii:89

G3JUA5              	100.00%		Q57688              	100.00%
Bootstrap support for G3JUA5 as seed ortholog is 100%.
Bootstrap support for Q57688 as seed ortholog is 100%.

Group of orthologs #205. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 M.jannaschii:87

G3JB40              	100.00%		P54050              	100.00%
Bootstrap support for G3JB40 as seed ortholog is 100%.
Bootstrap support for P54050 as seed ortholog is 100%.

Group of orthologs #206. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 M.jannaschii:87

G3JET7              	100.00%		Q57648              	100.00%
Bootstrap support for G3JET7 as seed ortholog is 100%.
Bootstrap support for Q57648 as seed ortholog is 100%.

Group of orthologs #207. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 M.jannaschii:85

G3J3B7              	100.00%		P54066              	100.00%
Bootstrap support for G3J3B7 as seed ortholog is 100%.
Bootstrap support for P54066 as seed ortholog is 100%.

Group of orthologs #208. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 M.jannaschii:85

G3J7V8              	100.00%		P54029              	100.00%
Bootstrap support for G3J7V8 as seed ortholog is 100%.
Bootstrap support for P54029 as seed ortholog is 100%.

Group of orthologs #209. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 M.jannaschii:85

G3JB62              	100.00%		Q58128              	100.00%
Bootstrap support for G3JB62 as seed ortholog is 100%.
Bootstrap support for Q58128 as seed ortholog is 100%.

Group of orthologs #210. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:7 M.jannaschii:85

G3JDC9              	100.00%		Q57891              	100.00%
Bootstrap support for G3JDC9 as seed ortholog is 65%.
Alternative seed ortholog is G3JQ39 (7 bits away from this cluster)
Bootstrap support for Q57891 as seed ortholog is 100%.

Group of orthologs #211. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 M.jannaschii:85

G3JLY2              	100.00%		Q58661              	100.00%
Bootstrap support for G3JLY2 as seed ortholog is 100%.
Bootstrap support for Q58661 as seed ortholog is 100%.

Group of orthologs #212. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:12 M.jannaschii:84

G3JDA2              	100.00%		P54030              	100.00%
Bootstrap support for G3JDA2 as seed ortholog is 68%.
Alternative seed ortholog is G3JSZ2 (12 bits away from this cluster)
Bootstrap support for P54030 as seed ortholog is 100%.

Group of orthologs #213. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 M.jannaschii:84

G3JD92              	100.00%		Q58450              	100.00%
Bootstrap support for G3JD92 as seed ortholog is 100%.
Bootstrap support for Q58450 as seed ortholog is 100%.

Group of orthologs #214. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 M.jannaschii:84

G3JI75              	100.00%		Q57907              	100.00%
Bootstrap support for G3JI75 as seed ortholog is 100%.
Bootstrap support for Q57907 as seed ortholog is 100%.

Group of orthologs #215. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 M.jannaschii:34

G3JHW7              	100.00%		Q59002              	100.00%
Bootstrap support for G3JHW7 as seed ortholog is 100%.
Bootstrap support for Q59002 as seed ortholog is 79%.

Group of orthologs #216. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 M.jannaschii:84

G3JNF5              	100.00%		Q57636              	100.00%
Bootstrap support for G3JNF5 as seed ortholog is 100%.
Bootstrap support for Q57636 as seed ortholog is 100%.

Group of orthologs #217. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 M.jannaschii:83

G3J3G6              	100.00%		P54047              	100.00%
Bootstrap support for G3J3G6 as seed ortholog is 100%.
Bootstrap support for P54047 as seed ortholog is 100%.

Group of orthologs #218. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 M.jannaschii:38

G3J725              	100.00%		Q57884              	100.00%
Bootstrap support for G3J725 as seed ortholog is 100%.
Bootstrap support for Q57884 as seed ortholog is 89%.

Group of orthologs #219. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 M.jannaschii:83

G3JUB2              	100.00%		P54010              	100.00%
Bootstrap support for G3JUB2 as seed ortholog is 100%.
Bootstrap support for P54010 as seed ortholog is 100%.

Group of orthologs #220. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 M.jannaschii:82

G3JUP4              	100.00%		Q58029              	100.00%
Bootstrap support for G3JUP4 as seed ortholog is 100%.
Bootstrap support for Q58029 as seed ortholog is 100%.

Group of orthologs #221. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 M.jannaschii:81

G3J3E8              	100.00%		Q58997              	100.00%
Bootstrap support for G3J3E8 as seed ortholog is 100%.
Bootstrap support for Q58997 as seed ortholog is 100%.

Group of orthologs #222. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:36 M.jannaschii:81

G3JB53              	100.00%		Q59069              	100.00%
Bootstrap support for G3JB53 as seed ortholog is 76%.
Bootstrap support for Q59069 as seed ortholog is 100%.

Group of orthologs #223. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 M.jannaschii:81

G3JTT3              	100.00%		Q58504              	100.00%
Bootstrap support for G3JTT3 as seed ortholog is 100%.
Bootstrap support for Q58504 as seed ortholog is 100%.

Group of orthologs #224. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 M.jannaschii:80

G3JA32              	100.00%		Q58370              	100.00%
Bootstrap support for G3JA32 as seed ortholog is 100%.
Bootstrap support for Q58370 as seed ortholog is 100%.

Group of orthologs #225. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 M.jannaschii:79

G3JU02              	100.00%		Q59000              	100.00%
Bootstrap support for G3JU02 as seed ortholog is 100%.
Bootstrap support for Q59000 as seed ortholog is 100%.

Group of orthologs #226. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 M.jannaschii:77

G3JL73              	100.00%		Q58881              	100.00%
Bootstrap support for G3JL73 as seed ortholog is 100%.
Bootstrap support for Q58881 as seed ortholog is 100%.

Group of orthologs #227. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 M.jannaschii:76

G3JUK4              	100.00%		Q58216              	100.00%
G3J5Y0              	27.54%		
G3JDL8              	8.05%		
Bootstrap support for G3JUK4 as seed ortholog is 100%.
Bootstrap support for Q58216 as seed ortholog is 100%.

Group of orthologs #228. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:25 M.jannaschii:33

G3JTR1              	100.00%		Q58065              	100.00%
G3J3U0              	9.92%		
Bootstrap support for G3JTR1 as seed ortholog is 72%.
Alternative seed ortholog is G3JDM6 (25 bits away from this cluster)
Bootstrap support for Q58065 as seed ortholog is 79%.

Group of orthologs #229. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 M.jannaschii:76

G3J4C1              	100.00%		Q58885              	100.00%
Bootstrap support for G3J4C1 as seed ortholog is 100%.
Bootstrap support for Q58885 as seed ortholog is 100%.

Group of orthologs #230. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 M.jannaschii:76

G3JHC5              	100.00%		P54016              	100.00%
Bootstrap support for G3JHC5 as seed ortholog is 100%.
Bootstrap support for P54016 as seed ortholog is 100%.

Group of orthologs #231. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 M.jannaschii:76

G3JTF0              	100.00%		Q57708              	100.00%
Bootstrap support for G3JTF0 as seed ortholog is 100%.
Bootstrap support for Q57708 as seed ortholog is 100%.

Group of orthologs #232. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 M.jannaschii:75

G3J5I8              	100.00%		Q58619              	100.00%
Bootstrap support for G3J5I8 as seed ortholog is 100%.
Bootstrap support for Q58619 as seed ortholog is 100%.

Group of orthologs #233. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 M.jannaschii:74

G3J4G0              	100.00%		Q58501              	100.00%
Bootstrap support for G3J4G0 as seed ortholog is 100%.
Bootstrap support for Q58501 as seed ortholog is 100%.

Group of orthologs #234. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 M.jannaschii:74

G3J9K7              	100.00%		P54051              	100.00%
Bootstrap support for G3J9K7 as seed ortholog is 100%.
Bootstrap support for P54051 as seed ortholog is 100%.

Group of orthologs #235. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 M.jannaschii:74

G3JRB6              	100.00%		Q57556              	100.00%
Bootstrap support for G3JRB6 as seed ortholog is 100%.
Bootstrap support for Q57556 as seed ortholog is 100%.

Group of orthologs #236. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 M.jannaschii:73

G3J2Z2              	100.00%		P54061              	100.00%
G3JGN1              	61.27%		
Bootstrap support for G3J2Z2 as seed ortholog is 100%.
Bootstrap support for P54061 as seed ortholog is 100%.

Group of orthologs #237. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 M.jannaschii:73

G3J516              	100.00%		Q58927              	100.00%
                    	       		Q58114              	8.48%
Bootstrap support for G3J516 as seed ortholog is 100%.
Bootstrap support for Q58927 as seed ortholog is 100%.

Group of orthologs #238. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 M.jannaschii:71

G3J977              	100.00%		P54011              	100.00%
Bootstrap support for G3J977 as seed ortholog is 100%.
Bootstrap support for P54011 as seed ortholog is 100%.

Group of orthologs #239. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 M.jannaschii:71

G3JA24              	100.00%		Q58548              	100.00%
Bootstrap support for G3JA24 as seed ortholog is 100%.
Bootstrap support for Q58548 as seed ortholog is 100%.

Group of orthologs #240. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 M.jannaschii:70

G3J5C7              	100.00%		Q57709              	100.00%
Bootstrap support for G3J5C7 as seed ortholog is 100%.
Bootstrap support for Q57709 as seed ortholog is 100%.

Group of orthologs #241. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 M.jannaschii:70

G3JQ46              	100.00%		Q58070              	100.00%
Bootstrap support for G3JQ46 as seed ortholog is 100%.
Bootstrap support for Q58070 as seed ortholog is 100%.

Group of orthologs #242. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:9 M.jannaschii:69

G3J8I6              	100.00%		Q58026              	100.00%
G3J2M3              	8.51%		
G3JLW2              	7.39%		
G3JGL3              	6.53%		
Bootstrap support for G3J8I6 as seed ortholog is 72%.
Alternative seed ortholog is G3JB57 (9 bits away from this cluster)
Bootstrap support for Q58026 as seed ortholog is 100%.

Group of orthologs #243. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 M.jannaschii:69

G3JSZ1              	100.00%		Q57885              	100.00%
Bootstrap support for G3JSZ1 as seed ortholog is 100%.
Bootstrap support for Q57885 as seed ortholog is 100%.

Group of orthologs #244. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 M.jannaschii:68

G3JT26              	100.00%		P54023              	100.00%
Bootstrap support for G3JT26 as seed ortholog is 100%.
Bootstrap support for P54023 as seed ortholog is 100%.

Group of orthologs #245. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 M.jannaschii:66

G3JQ44              	100.00%		Q58916              	100.00%
                    	       		Q60362              	43.57%
Bootstrap support for G3JQ44 as seed ortholog is 100%.
Bootstrap support for Q58916 as seed ortholog is 100%.

Group of orthologs #246. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 M.jannaschii:66

G3JIK7              	100.00%		Q60352              	100.00%
Bootstrap support for G3JIK7 as seed ortholog is 100%.
Bootstrap support for Q60352 as seed ortholog is 100%.

Group of orthologs #247. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 M.jannaschii:65

G3JU53              	100.00%		Q57741              	100.00%
Bootstrap support for G3JU53 as seed ortholog is 100%.
Bootstrap support for Q57741 as seed ortholog is 100%.

Group of orthologs #248. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:9 M.jannaschii:64

G3JFN5              	100.00%		Q58925              	100.00%
Bootstrap support for G3JFN5 as seed ortholog is 63%.
Alternative seed ortholog is G3J3V9 (9 bits away from this cluster)
Bootstrap support for Q58925 as seed ortholog is 100%.

Group of orthologs #249. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 M.jannaschii:64

G3JI94              	100.00%		Q58484              	100.00%
Bootstrap support for G3JI94 as seed ortholog is 100%.
Bootstrap support for Q58484 as seed ortholog is 100%.

Group of orthologs #250. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 M.jannaschii:64

G3JP44              	100.00%		Q58497              	100.00%
Bootstrap support for G3JP44 as seed ortholog is 100%.
Bootstrap support for Q58497 as seed ortholog is 100%.

Group of orthologs #251. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 M.jannaschii:64

G3JUD0              	100.00%		Q57815              	100.00%
Bootstrap support for G3JUD0 as seed ortholog is 100%.
Bootstrap support for Q57815 as seed ortholog is 100%.

Group of orthologs #252. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 M.jannaschii:15

G3JEF3              	100.00%		Q58509              	100.00%
Bootstrap support for G3JEF3 as seed ortholog is 100%.
Bootstrap support for Q58509 as seed ortholog is 73%.
Alternative seed ortholog is Q59040 (15 bits away from this cluster)

Group of orthologs #253. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 M.jannaschii:62

G3J5E5              	100.00%		Q58827              	100.00%
Bootstrap support for G3J5E5 as seed ortholog is 100%.
Bootstrap support for Q58827 as seed ortholog is 100%.

Group of orthologs #254. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 M.jannaschii:62

G3J8G3              	100.00%		Q58338              	100.00%
Bootstrap support for G3J8G3 as seed ortholog is 100%.
Bootstrap support for Q58338 as seed ortholog is 100%.

Group of orthologs #255. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 M.jannaschii:62

G3JDJ0              	100.00%		Q57979              	100.00%
Bootstrap support for G3JDJ0 as seed ortholog is 100%.
Bootstrap support for Q57979 as seed ortholog is 100%.

Group of orthologs #256. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 M.jannaschii:61

G3JEN8              	100.00%		Q57599              	100.00%
Bootstrap support for G3JEN8 as seed ortholog is 100%.
Bootstrap support for Q57599 as seed ortholog is 100%.

Group of orthologs #257. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 M.jannaschii:61

G3JCT0              	100.00%		Q58625              	100.00%
Bootstrap support for G3JCT0 as seed ortholog is 100%.
Bootstrap support for Q58625 as seed ortholog is 100%.

Group of orthologs #258. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 M.jannaschii:60

G3J6F2              	100.00%		Q58892              	100.00%
Bootstrap support for G3J6F2 as seed ortholog is 100%.
Bootstrap support for Q58892 as seed ortholog is 100%.

Group of orthologs #259. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 M.jannaschii:60

G3JBM5              	100.00%		P54065              	100.00%
Bootstrap support for G3JBM5 as seed ortholog is 100%.
Bootstrap support for P54065 as seed ortholog is 100%.

Group of orthologs #260. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 M.jannaschii:60

G3JU88              	100.00%		Q58622              	100.00%
Bootstrap support for G3JU88 as seed ortholog is 100%.
Bootstrap support for Q58622 as seed ortholog is 100%.

Group of orthologs #261. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 M.jannaschii:59

G3J458              	100.00%		Q58337              	100.00%
Bootstrap support for G3J458 as seed ortholog is 100%.
Bootstrap support for Q58337 as seed ortholog is 100%.

Group of orthologs #262. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 M.jannaschii:59

G3JHT9              	100.00%		Q58060              	100.00%
Bootstrap support for G3JHT9 as seed ortholog is 100%.
Bootstrap support for Q58060 as seed ortholog is 100%.

Group of orthologs #263. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 M.jannaschii:59

G3JRK9              	100.00%		Q58092              	100.00%
Bootstrap support for G3JRK9 as seed ortholog is 100%.
Bootstrap support for Q58092 as seed ortholog is 100%.

Group of orthologs #264. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 M.jannaschii:58

G3JNY3              	100.00%		Q58562              	100.00%
G3JBI7              	13.16%		
G3J8H2              	9.01%		
G3JA22              	6.58%		
G3JGF5              	5.87%		
G3JS54              	5.72%		
Bootstrap support for G3JNY3 as seed ortholog is 100%.
Bootstrap support for Q58562 as seed ortholog is 100%.

Group of orthologs #265. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 M.jannaschii:58

G3JJQ7              	100.00%		Q57649              	100.00%
Bootstrap support for G3JJQ7 as seed ortholog is 100%.
Bootstrap support for Q57649 as seed ortholog is 100%.

Group of orthologs #266. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 M.jannaschii:58

G3JUQ2              	100.00%		P54053              	100.00%
Bootstrap support for G3JUQ2 as seed ortholog is 100%.
Bootstrap support for P54053 as seed ortholog is 100%.

Group of orthologs #267. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 M.jannaschii:57

G3J4S0              	100.00%		Q58967              	100.00%
                    	       		Q58488              	25.70%
                    	       		Q58206              	14.86%
                    	       		Q57855              	14.66%
                    	       		Q58903              	12.65%
                    	       		Q58418              	12.05%
                    	       		Q58663              	10.84%
                    	       		Q58283              	10.24%
                    	       		Q57554              	9.64%
                    	       		Q58762              	7.83%
                    	       		Q58429              	7.43%
                    	       		Q60350              	7.03%
Bootstrap support for G3J4S0 as seed ortholog is 100%.
Bootstrap support for Q58967 as seed ortholog is 100%.

Group of orthologs #268. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 M.jannaschii:57

G3J4Q3              	100.00%		P54110              	100.00%
Bootstrap support for G3J4Q3 as seed ortholog is 100%.
Bootstrap support for P54110 as seed ortholog is 100%.

Group of orthologs #269. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:13 M.jannaschii:57

G3JBB3              	100.00%		Q58832              	100.00%
Bootstrap support for G3JBB3 as seed ortholog is 67%.
Alternative seed ortholog is G3JEC0 (13 bits away from this cluster)
Bootstrap support for Q58832 as seed ortholog is 100%.

Group of orthologs #270. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 M.jannaschii:57

G3JM05              	100.00%		Q58829              	100.00%
Bootstrap support for G3JM05 as seed ortholog is 100%.
Bootstrap support for Q58829 as seed ortholog is 100%.

Group of orthologs #271. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 M.jannaschii:57

G3JSH3              	100.00%		Q59005              	100.00%
Bootstrap support for G3JSH3 as seed ortholog is 100%.
Bootstrap support for Q59005 as seed ortholog is 100%.

Group of orthologs #272. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:4 M.jannaschii:56

G3J5A8              	100.00%		Q58860              	100.00%
G3JJX8              	27.79%		
G3JNK4              	20.44%		
Bootstrap support for G3J5A8 as seed ortholog is 44%.
Alternative seed ortholog is G3J4S3 (4 bits away from this cluster)
Bootstrap support for Q58860 as seed ortholog is 100%.

Group of orthologs #273. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 M.jannaschii:56

G3JHF7              	100.00%		Q58036              	100.00%
Bootstrap support for G3JHF7 as seed ortholog is 100%.
Bootstrap support for Q58036 as seed ortholog is 100%.

Group of orthologs #274. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 M.jannaschii:55

G3JK89              	100.00%		P54009              	100.00%
Bootstrap support for G3JK89 as seed ortholog is 100%.
Bootstrap support for P54009 as seed ortholog is 100%.

Group of orthologs #275. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 M.jannaschii:54

G3J5F1              	100.00%		Q58094              	100.00%
Bootstrap support for G3J5F1 as seed ortholog is 100%.
Bootstrap support for Q58094 as seed ortholog is 100%.

Group of orthologs #276. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 M.jannaschii:54

G3JJ32              	100.00%		Q57849              	100.00%
Bootstrap support for G3JJ32 as seed ortholog is 100%.
Bootstrap support for Q57849 as seed ortholog is 100%.

Group of orthologs #277. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 M.jannaschii:54

G3JQL3              	100.00%		Q58716              	100.00%
Bootstrap support for G3JQL3 as seed ortholog is 100%.
Bootstrap support for Q58716 as seed ortholog is 100%.

Group of orthologs #278. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 M.jannaschii:53

G3JQJ4              	100.00%		Q58735              	100.00%
G3J9W6              	20.56%		
G3J468              	18.33%		
G3JM32              	18.06%		
G3JNA8              	17.78%		
G3JDR6              	17.22%		
G3JQ25              	16.11%		
G3J629              	14.72%		
G3JJ86              	13.33%		
G3JSL2              	11.39%		
G3JLK2              	11.11%		
G3JBZ1              	7.78%		
G3JD94              	7.22%		
G3JIW8              	5.83%		
G3JI60              	5.56%		
Bootstrap support for G3JQJ4 as seed ortholog is 100%.
Bootstrap support for Q58735 as seed ortholog is 100%.

Group of orthologs #279. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 M.jannaschii:52

G3J5U2              	100.00%		Q58838              	100.00%
                    	       		Q58922              	100.00%
Bootstrap support for G3J5U2 as seed ortholog is 100%.
Bootstrap support for Q58838 as seed ortholog is 100%.
Bootstrap support for Q58922 as seed ortholog is 100%.

Group of orthologs #280. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 M.jannaschii:52

G3JNS6              	100.00%		Q57846              	100.00%
Bootstrap support for G3JNS6 as seed ortholog is 100%.
Bootstrap support for Q57846 as seed ortholog is 100%.

Group of orthologs #281. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 M.jannaschii:51

G3JMR7              	100.00%		P54013              	100.00%
Bootstrap support for G3JMR7 as seed ortholog is 100%.
Bootstrap support for P54013 as seed ortholog is 100%.

Group of orthologs #282. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 M.jannaschii:50

G3JMH3              	100.00%		P54048              	100.00%
Bootstrap support for G3JMH3 as seed ortholog is 100%.
Bootstrap support for P54048 as seed ortholog is 100%.

Group of orthologs #283. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 M.jannaschii:50

G3JSN5              	100.00%		Q58040              	100.00%
Bootstrap support for G3JSN5 as seed ortholog is 100%.
Bootstrap support for Q58040 as seed ortholog is 100%.

Group of orthologs #284. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 M.jannaschii:50

G3JTV8              	100.00%		Q58377              	100.00%
Bootstrap support for G3JTV8 as seed ortholog is 100%.
Bootstrap support for Q58377 as seed ortholog is 100%.

Group of orthologs #285. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 M.jannaschii:49

G3JB02              	100.00%		Q58813              	100.00%
G3J7M0              	30.38%		
Bootstrap support for G3JB02 as seed ortholog is 100%.
Bootstrap support for Q58813 as seed ortholog is 100%.

Group of orthologs #286. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 M.jannaschii:49

G3JB55              	100.00%		Q58987              	100.00%
G3JTJ8              	25.37%		
Bootstrap support for G3JB55 as seed ortholog is 100%.
Bootstrap support for Q58987 as seed ortholog is 100%.

Group of orthologs #287. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 M.jannaschii:49

G3JBD3              	100.00%		Q57832              	100.00%
Bootstrap support for G3JBD3 as seed ortholog is 100%.
Bootstrap support for Q57832 as seed ortholog is 100%.

Group of orthologs #288. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 M.jannaschii:48

G3J810              	100.00%		Q58452              	100.00%
Bootstrap support for G3J810 as seed ortholog is 100%.
Bootstrap support for Q58452 as seed ortholog is 100%.

Group of orthologs #289. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 M.jannaschii:47

G3JII0              	100.00%		P54028              	100.00%
Bootstrap support for G3JII0 as seed ortholog is 100%.
Bootstrap support for P54028 as seed ortholog is 100%.

Group of orthologs #290. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 M.jannaschii:46

G3JB37              	100.00%		P54056              	100.00%
Bootstrap support for G3JB37 as seed ortholog is 100%.
Bootstrap support for P54056 as seed ortholog is 100%.

Group of orthologs #291. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 M.jannaschii:46

G3JNL9              	100.00%		P54037              	100.00%
Bootstrap support for G3JNL9 as seed ortholog is 100%.
Bootstrap support for P54037 as seed ortholog is 100%.

Group of orthologs #292. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 M.jannaschii:44

G3JCU4              	100.00%		Q57573              	100.00%
Bootstrap support for G3JCU4 as seed ortholog is 100%.
Bootstrap support for Q57573 as seed ortholog is 100%.

Group of orthologs #293. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 M.jannaschii:44

G3JMH0              	100.00%		Q57840              	100.00%
Bootstrap support for G3JMH0 as seed ortholog is 100%.
Bootstrap support for Q57840 as seed ortholog is 100%.

Group of orthologs #294. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 M.jannaschii:44

G3JSG3              	100.00%		Q58025              	100.00%
Bootstrap support for G3JSG3 as seed ortholog is 100%.
Bootstrap support for Q58025 as seed ortholog is 100%.

Group of orthologs #295. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 M.jannaschii:41

G3JLU9              	100.00%		Q58588              	100.00%
Bootstrap support for G3JLU9 as seed ortholog is 100%.
Bootstrap support for Q58588 as seed ortholog is 100%.