###################################
1168 groups of orthologs
1464 in-paralogs from C.intestinalis
1199 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 2526 bits
Score difference with first non-orthologous sequence - C.intestinalis:1604 P.knowlesi:1339

F6V620              	100.00%		B3L363              	100.00%
H2XPC8              	45.23%		
F6PHB9              	39.70%		
Bootstrap support for F6V620 as seed ortholog is 100%.
Bootstrap support for B3L363 as seed ortholog is 100%.

Group of orthologs #2. Best score 2104 bits
Score difference with first non-orthologous sequence - C.intestinalis:1319 P.knowlesi:581

F7AU91              	100.00%		B3L1Z2              	100.00%
F6ZZ40              	49.40%		
F6RNF5              	37.47%		
Bootstrap support for F7AU91 as seed ortholog is 100%.
Bootstrap support for B3L1Z2 as seed ortholog is 100%.

Group of orthologs #3. Best score 1538 bits
Score difference with first non-orthologous sequence - C.intestinalis:1538 P.knowlesi:806

F6SUC2              	100.00%		B3L428              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for B3L428 as seed ortholog is 100%.

Group of orthologs #4. Best score 1351 bits
Score difference with first non-orthologous sequence - C.intestinalis:1351 P.knowlesi:457

F6ZLB7              	100.00%		B3L1P3              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for B3L1P3 as seed ortholog is 100%.

Group of orthologs #5. Best score 1347 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 P.knowlesi:594

F6ZKS0              	100.00%		B3KZT8              	100.00%
Bootstrap support for F6ZKS0 as seed ortholog is 100%.
Bootstrap support for B3KZT8 as seed ortholog is 100%.

Group of orthologs #6. Best score 1287 bits
Score difference with first non-orthologous sequence - C.intestinalis:1287 P.knowlesi:610

F6QR00              	100.00%		B3L0J5              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #7. Best score 1094 bits
Score difference with first non-orthologous sequence - C.intestinalis:1094 P.knowlesi:1094

F7AKG2              	100.00%		B3LBF9              	100.00%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for B3LBF9 as seed ortholog is 100%.

Group of orthologs #8. Best score 1040 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 P.knowlesi:426

F6YKR9              	100.00%		B3L263              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for B3L263 as seed ortholog is 100%.

Group of orthologs #9. Best score 1027 bits
Score difference with first non-orthologous sequence - C.intestinalis:900 P.knowlesi:708

F6XKY1              	100.00%		B3L9Q6              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for B3L9Q6 as seed ortholog is 100%.

Group of orthologs #10. Best score 1020 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 P.knowlesi:292

F6VLN4              	100.00%		B3L7L4              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for B3L7L4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1019 bits
Score difference with first non-orthologous sequence - C.intestinalis:898 P.knowlesi:1019

F7AKQ3              	100.00%		B3L8Q4              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #12. Best score 1002 bits
Score difference with first non-orthologous sequence - C.intestinalis:795 P.knowlesi:1002

F6SXA4              	100.00%		B3LCZ1              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for B3LCZ1 as seed ortholog is 100%.

Group of orthologs #13. Best score 978 bits
Score difference with first non-orthologous sequence - C.intestinalis:978 P.knowlesi:978

F6T0F1              	100.00%		B3L960              	100.00%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for B3L960 as seed ortholog is 100%.

Group of orthologs #14. Best score 950 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.knowlesi:950

F6W8I3              	100.00%		B3L1A4              	100.00%
Bootstrap support for F6W8I3 as seed ortholog is 99%.
Bootstrap support for B3L1A4 as seed ortholog is 100%.

Group of orthologs #15. Best score 938 bits
Score difference with first non-orthologous sequence - C.intestinalis:938 P.knowlesi:938

F6WUQ7              	100.00%		B3L7A0              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for B3L7A0 as seed ortholog is 100%.

Group of orthologs #16. Best score 915 bits
Score difference with first non-orthologous sequence - C.intestinalis:915 P.knowlesi:915

F6U9F4              	100.00%		B3L8H8              	100.00%
Bootstrap support for F6U9F4 as seed ortholog is 100%.
Bootstrap support for B3L8H8 as seed ortholog is 100%.

Group of orthologs #17. Best score 915 bits
Score difference with first non-orthologous sequence - C.intestinalis:915 P.knowlesi:915

F7AMF6              	100.00%		B3LCI5              	100.00%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for B3LCI5 as seed ortholog is 100%.

Group of orthologs #18. Best score 875 bits
Score difference with first non-orthologous sequence - C.intestinalis:875 P.knowlesi:875

F6WCR1              	100.00%		B3L1S9              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for B3L1S9 as seed ortholog is 100%.

Group of orthologs #19. Best score 862 bits
Score difference with first non-orthologous sequence - C.intestinalis:862 P.knowlesi:862

H2XQK9              	100.00%		B3L3I5              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for B3L3I5 as seed ortholog is 100%.

Group of orthologs #20. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 P.knowlesi:829

F6SYL0              	100.00%		B3L3M0              	100.00%
L7N0T3              	88.24%		
Bootstrap support for F6SYL0 as seed ortholog is 100%.
Bootstrap support for B3L3M0 as seed ortholog is 100%.

Group of orthologs #21. Best score 816 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.knowlesi:283

F6UYA6              	100.00%		B3L6X8              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for B3L6X8 as seed ortholog is 100%.

Group of orthologs #22. Best score 804 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:804

F7B0Q2              	87.80%		B3L1P1              	100.00%
F6SJ24              	100.00%		B3L347              	100.00%
F6QB29              	86.18%		
F6XCZ8              	73.17%		
F6QB20              	69.92%		
L7N0T5              	66.67%		
Bootstrap support for F6SJ24 as seed ortholog is 99%.
Bootstrap support for B3L1P1 as seed ortholog is 100%.
Bootstrap support for B3L347 as seed ortholog is 100%.

Group of orthologs #23. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.knowlesi:795

F6SXM4              	100.00%		B3L2J7              	100.00%
F7BHA0              	18.80%		
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for B3L2J7 as seed ortholog is 100%.

Group of orthologs #24. Best score 786 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 P.knowlesi:412

F6X211              	100.00%		B3KZL1              	100.00%
H2XSH4              	96.24%		
H2XNA4              	94.99%		
F6X229              	58.85%		
Bootstrap support for F6X211 as seed ortholog is 100%.
Bootstrap support for B3KZL1 as seed ortholog is 100%.

Group of orthologs #25. Best score 786 bits
Score difference with first non-orthologous sequence - C.intestinalis:786 P.knowlesi:508

F6WXT4              	100.00%		B3L3G9              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for B3L3G9 as seed ortholog is 100%.

Group of orthologs #26. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.knowlesi:782

H2XU53              	100.00%		B3L5E9              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for B3L5E9 as seed ortholog is 100%.

Group of orthologs #27. Best score 763 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 P.knowlesi:458

H2XLC2              	100.00%		B3L5Y2              	100.00%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for B3L5Y2 as seed ortholog is 100%.

Group of orthologs #28. Best score 741 bits
Score difference with first non-orthologous sequence - C.intestinalis:741 P.knowlesi:741

F6XZ43              	100.00%		B3L6T7              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for B3L6T7 as seed ortholog is 100%.

Group of orthologs #29. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 P.knowlesi:732

H2XJT5              	100.00%		B3LBT4              	100.00%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #30. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:723 P.knowlesi:723

H2XJF1              	100.00%		B3L4A9              	100.00%
Bootstrap support for H2XJF1 as seed ortholog is 100%.
Bootstrap support for B3L4A9 as seed ortholog is 100%.

Group of orthologs #31. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 P.knowlesi:722

F6W1H2              	100.00%		B3L7Y9              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for B3L7Y9 as seed ortholog is 100%.

Group of orthologs #32. Best score 719 bits
Score difference with first non-orthologous sequence - C.intestinalis:719 P.knowlesi:719

F7A8C2              	100.00%		B3KZZ1              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #33. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.knowlesi:710

F6ZJN8              	100.00%		B3LBA6              	100.00%
Bootstrap support for F6ZJN8 as seed ortholog is 100%.
Bootstrap support for B3LBA6 as seed ortholog is 100%.

Group of orthologs #34. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 P.knowlesi:691

H2XKD5              	100.00%		B3L165              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for B3L165 as seed ortholog is 100%.

Group of orthologs #35. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 P.knowlesi:667

F6UXR3              	100.00%		B3L0U2              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for B3L0U2 as seed ortholog is 100%.

Group of orthologs #36. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 P.knowlesi:664

F6TPR3              	100.00%		B3LD12              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for B3LD12 as seed ortholog is 100%.

Group of orthologs #37. Best score 660 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 P.knowlesi:544

F6YYE4              	100.00%		B3LC00              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for B3LC00 as seed ortholog is 100%.

Group of orthologs #38. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 P.knowlesi:658

F7BKT8              	100.00%		B3L369              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for B3L369 as seed ortholog is 100%.

Group of orthologs #39. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 P.knowlesi:543

F6YQL6              	100.00%		B3L4K9              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for B3L4K9 as seed ortholog is 100%.

Group of orthologs #40. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.knowlesi:48

A2SY09              	100.00%		B3LDA3              	100.00%
F6SCP4              	78.30%		
F6QBJ1              	61.32%		
L7N0T1              	57.55%		
F6T8C7              	56.60%		
F6SDC9              	56.60%		
F6Q662              	26.42%		
F6SC57              	17.92%		
F6R0S4              	9.43%		
Bootstrap support for A2SY09 as seed ortholog is 100%.
Bootstrap support for B3LDA3 as seed ortholog is 97%.

Group of orthologs #41. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:598 P.knowlesi:653

F6YTL6              	100.00%		B3L3L7              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for B3L3L7 as seed ortholog is 100%.

Group of orthologs #42. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 P.knowlesi:645

H2XSX9              	100.00%		B3L753              	100.00%
H2XZ08              	100.00%		
F6ZIF2              	45.99%		
F6ZID9              	39.02%		
Bootstrap support for H2XSX9 as seed ortholog is 100%.
Bootstrap support for H2XZ08 as seed ortholog is 100%.
Bootstrap support for B3L753 as seed ortholog is 100%.

Group of orthologs #43. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.knowlesi:645

H2XYN5              	100.00%		B3L7C9              	100.00%
Bootstrap support for H2XYN5 as seed ortholog is 99%.
Bootstrap support for B3L7C9 as seed ortholog is 100%.

Group of orthologs #44. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:644 P.knowlesi:217

F6S181              	100.00%		B3L5F6              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for B3L5F6 as seed ortholog is 99%.

Group of orthologs #45. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 P.knowlesi:643

Q4H2Q8              	100.00%		B3L4J4              	100.00%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for B3L4J4 as seed ortholog is 100%.

Group of orthologs #46. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 P.knowlesi:342

F6U4V1              	100.00%		B3LCP8              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for B3LCP8 as seed ortholog is 100%.

Group of orthologs #47. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 P.knowlesi:633

H2Y1Z9              	100.00%		B3L6U2              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #48. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 P.knowlesi:628

F6SI05              	100.00%		B3L565              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #49. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 P.knowlesi:628

F6PZ06              	100.00%		B3LBS7              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for B3LBS7 as seed ortholog is 100%.

Group of orthologs #50. Best score 627 bits
Score difference with first non-orthologous sequence - C.intestinalis:627 P.knowlesi:627

F7BBD1              	100.00%		B3L4J0              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for B3L4J0 as seed ortholog is 100%.

Group of orthologs #51. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 P.knowlesi:624

F6QX34              	100.00%		B3L402              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for B3L402 as seed ortholog is 100%.

Group of orthologs #52. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 P.knowlesi:297

F6RHA1              	100.00%		B3L6Z9              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for B3L6Z9 as seed ortholog is 100%.

Group of orthologs #53. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:621

F6Q9K0              	100.00%		B3L9E5              	100.00%
Bootstrap support for F6Q9K0 as seed ortholog is 81%.
Bootstrap support for B3L9E5 as seed ortholog is 100%.

Group of orthologs #54. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 P.knowlesi:616

F6YD90              	100.00%		B3L7I1              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for B3L7I1 as seed ortholog is 100%.

Group of orthologs #55. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 P.knowlesi:616

F6YFY0              	100.00%		B3LAR0              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for B3LAR0 as seed ortholog is 100%.

Group of orthologs #56. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 P.knowlesi:393

Q1RPW7              	100.00%		B3L5Y4              	100.00%
Bootstrap support for Q1RPW7 as seed ortholog is 100%.
Bootstrap support for B3L5Y4 as seed ortholog is 100%.

Group of orthologs #57. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 P.knowlesi:444

H2XZZ5              	100.00%		B3LCM2              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for B3LCM2 as seed ortholog is 100%.

Group of orthologs #58. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 P.knowlesi:602

F6SI53              	100.00%		B3L2B2              	100.00%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for B3L2B2 as seed ortholog is 100%.

Group of orthologs #59. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:598 P.knowlesi:598

F6XMA0              	100.00%		B3L746              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for B3L746 as seed ortholog is 100%.

Group of orthologs #60. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 P.knowlesi:597

F7BHP4              	100.00%		B3LDD0              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for B3LDD0 as seed ortholog is 100%.

Group of orthologs #61. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.knowlesi:55

F6U4L6              	100.00%		B3L3B1              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 99%.
Bootstrap support for B3L3B1 as seed ortholog is 84%.

Group of orthologs #62. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 P.knowlesi:592

L7N0S7              	100.00%		B3L0I2              	100.00%
F6RR11              	37.31%		
Bootstrap support for L7N0S7 as seed ortholog is 100%.
Bootstrap support for B3L0I2 as seed ortholog is 100%.

Group of orthologs #63. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 P.knowlesi:532

H2XVY7              	100.00%		B3L5D0              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for B3L5D0 as seed ortholog is 100%.

Group of orthologs #64. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 P.knowlesi:586

F6PST3              	100.00%		B3L0N2              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for B3L0N2 as seed ortholog is 100%.

Group of orthologs #65. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 P.knowlesi:517

F7B8G8              	100.00%		B3L4B5              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for B3L4B5 as seed ortholog is 100%.

Group of orthologs #66. Best score 583 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 P.knowlesi:583

F7BEF3              	100.00%		B3L4C8              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for B3L4C8 as seed ortholog is 100%.

Group of orthologs #67. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 P.knowlesi:582

F6TML4              	100.00%		B3L2D7              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for B3L2D7 as seed ortholog is 100%.

Group of orthologs #68. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 P.knowlesi:183

F6WTE3              	100.00%		B3L3U9              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for B3L3U9 as seed ortholog is 99%.

Group of orthologs #69. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 P.knowlesi:195

F6UKC4              	100.00%		B3LCX4              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for B3LCX4 as seed ortholog is 99%.

Group of orthologs #70. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 P.knowlesi:572

F6XKP0              	100.00%		B3L5B0              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for B3L5B0 as seed ortholog is 100%.

Group of orthologs #71. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 P.knowlesi:572

H2XQX6              	100.00%		B3KZB0              	100.00%
Bootstrap support for H2XQX6 as seed ortholog is 100%.
Bootstrap support for B3KZB0 as seed ortholog is 100%.

Group of orthologs #72. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.knowlesi:121

F6XY03              	100.00%		B3LCL1              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 99%.
Bootstrap support for B3LCL1 as seed ortholog is 98%.

Group of orthologs #73. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 P.knowlesi:566

F6ZM86              	100.00%		B3L8D7              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for B3L8D7 as seed ortholog is 100%.

Group of orthologs #74. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 P.knowlesi:564

F6W7K5              	100.00%		B3LCT4              	100.00%
F6W7I3              	84.98%		
Bootstrap support for F6W7K5 as seed ortholog is 100%.
Bootstrap support for B3LCT4 as seed ortholog is 100%.

Group of orthologs #75. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 P.knowlesi:563

F6XJ08              	100.00%		B3L892              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for B3L892 as seed ortholog is 100%.

Group of orthologs #76. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 P.knowlesi:555

F6XZ93              	100.00%		B3L3V4              	100.00%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #77. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.knowlesi:356

F7B898              	100.00%		B3L3Z3              	100.00%
Bootstrap support for F7B898 as seed ortholog is 100%.
Bootstrap support for B3L3Z3 as seed ortholog is 100%.

Group of orthologs #78. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 P.knowlesi:286

F6Y1K6              	100.00%		B3LAL6              	100.00%
F6Q5E4              	70.29%		
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for B3LAL6 as seed ortholog is 100%.

Group of orthologs #79. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.knowlesi:547

F6UWX3              	100.00%		B3LBM5              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for B3LBM5 as seed ortholog is 100%.

Group of orthologs #80. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 P.knowlesi:543

F6Y8C3              	100.00%		B3L1W5              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for B3L1W5 as seed ortholog is 100%.

Group of orthologs #81. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 P.knowlesi:540

F6T9M1              	100.00%		B3L1F4              	100.00%
Bootstrap support for F6T9M1 as seed ortholog is 100%.
Bootstrap support for B3L1F4 as seed ortholog is 100%.

Group of orthologs #82. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.knowlesi:186

F6Y8H4              	100.00%		B3L4Z9              	100.00%
Bootstrap support for F6Y8H4 as seed ortholog is 98%.
Bootstrap support for B3L4Z9 as seed ortholog is 99%.

Group of orthologs #83. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 P.knowlesi:369

F6XF93              	100.00%		B3L1P5              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for B3L1P5 as seed ortholog is 100%.

Group of orthologs #84. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 P.knowlesi:121

F6SH00              	100.00%		B3LCI6              	100.00%
Bootstrap support for F6SH00 as seed ortholog is 100%.
Bootstrap support for B3LCI6 as seed ortholog is 96%.

Group of orthologs #85. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 P.knowlesi:531

F6XHC0              	100.00%		B3LA84              	100.00%
                    	       		B3LAJ5              	9.96%
Bootstrap support for F6XHC0 as seed ortholog is 100%.
Bootstrap support for B3LA84 as seed ortholog is 100%.

Group of orthologs #86. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 P.knowlesi:528

F6QFH5              	100.00%		B3L8E1              	100.00%
F6ZF70              	20.44%		
Bootstrap support for F6QFH5 as seed ortholog is 100%.
Bootstrap support for B3L8E1 as seed ortholog is 100%.

Group of orthologs #87. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.knowlesi:525

F6YDI9              	100.00%		B3L2S3              	100.00%
Bootstrap support for F6YDI9 as seed ortholog is 100%.
Bootstrap support for B3L2S3 as seed ortholog is 100%.

Group of orthologs #88. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 P.knowlesi:524

F6Q9P9              	100.00%		B3LAH4              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #89. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 P.knowlesi:523

F7BPQ7              	100.00%		B3L4W9              	100.00%
F6XU15              	27.58%		
Bootstrap support for F7BPQ7 as seed ortholog is 100%.
Bootstrap support for B3L4W9 as seed ortholog is 100%.

Group of orthologs #90. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.knowlesi:313

F6TMJ9              	100.00%		B3L971              	100.00%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for B3L971 as seed ortholog is 100%.

Group of orthologs #91. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:146

F6W1L1              	100.00%		B3L619              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 99%.
Bootstrap support for B3L619 as seed ortholog is 99%.

Group of orthologs #92. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 P.knowlesi:278

F7A1V5              	100.00%		B3L682              	100.00%
Bootstrap support for F7A1V5 as seed ortholog is 100%.
Bootstrap support for B3L682 as seed ortholog is 100%.

Group of orthologs #93. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 P.knowlesi:518

F6ZHQ8              	100.00%		B3L419              	100.00%
H2XS32              	14.75%		
F6VSD0              	6.74%		
Bootstrap support for F6ZHQ8 as seed ortholog is 100%.
Bootstrap support for B3L419 as seed ortholog is 100%.

Group of orthologs #94. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.knowlesi:350

H2XS20              	100.00%		B3L794              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for B3L794 as seed ortholog is 100%.

Group of orthologs #95. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.knowlesi:302

F6VEU9              	100.00%		B3LBS6              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for B3LBS6 as seed ortholog is 100%.

Group of orthologs #96. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 P.knowlesi:288

F6SSP0              	100.00%		B3L9L0              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for B3L9L0 as seed ortholog is 100%.

Group of orthologs #97. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 P.knowlesi:511

F6ZP18              	100.00%		B3L866              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for B3L866 as seed ortholog is 100%.

Group of orthologs #98. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 P.knowlesi:511

H2XJT1              	100.00%		B3L4H1              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for B3L4H1 as seed ortholog is 100%.

Group of orthologs #99. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 P.knowlesi:509

F6YKX8              	100.00%		B3L240              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for B3L240 as seed ortholog is 100%.

Group of orthologs #100. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 P.knowlesi:508

F6U2M6              	100.00%		B3LAJ1              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for B3LAJ1 as seed ortholog is 100%.

Group of orthologs #101. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 P.knowlesi:501

F6V9G2              	100.00%		B3L613              	100.00%
Bootstrap support for F6V9G2 as seed ortholog is 100%.
Bootstrap support for B3L613 as seed ortholog is 100%.

Group of orthologs #102. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 P.knowlesi:498

F6YQS6              	100.00%		B3L8T7              	100.00%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for B3L8T7 as seed ortholog is 100%.

Group of orthologs #103. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 P.knowlesi:495

F6UE02              	100.00%		B3KZW6              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for B3KZW6 as seed ortholog is 100%.

Group of orthologs #104. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.knowlesi:321

F6Z194              	100.00%		B3L0Q5              	100.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for B3L0Q5 as seed ortholog is 100%.

Group of orthologs #105. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 P.knowlesi:492

F6YND1              	100.00%		B3L2P2              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #106. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 P.knowlesi:336

F6U4J4              	100.00%		B3L633              	100.00%
F6U3N6              	64.13%		
F6S2T0              	47.21%		
F6S2J4              	38.95%		
F6WVU8              	30.94%		
F6RZC1              	27.35%		
Bootstrap support for F6U4J4 as seed ortholog is 100%.
Bootstrap support for B3L633 as seed ortholog is 100%.

Group of orthologs #107. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 P.knowlesi:488

H2XWW7              	100.00%		B3L4F8              	100.00%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for B3L4F8 as seed ortholog is 100%.

Group of orthologs #108. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:172

F6UHH9              	100.00%		B3L9V8              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 98%.
Bootstrap support for B3L9V8 as seed ortholog is 99%.

Group of orthologs #109. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 P.knowlesi:214

F6TZX4              	100.00%		B3L6I2              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for B3L6I2 as seed ortholog is 99%.

Group of orthologs #110. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 P.knowlesi:480

F6VBU5              	100.00%		B3L9R6              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #111. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 P.knowlesi:474

F6TKV3              	100.00%		B3L184              	100.00%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for B3L184 as seed ortholog is 100%.

Group of orthologs #112. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.knowlesi:221

H2XSM0              	100.00%		B3L3A6              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 99%.
Bootstrap support for B3L3A6 as seed ortholog is 100%.

Group of orthologs #113. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 P.knowlesi:472

F6X7X8              	100.00%		B3L538              	100.00%
Bootstrap support for F6X7X8 as seed ortholog is 99%.
Bootstrap support for B3L538 as seed ortholog is 100%.

Group of orthologs #114. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 P.knowlesi:36

F6R8X1              	100.00%		B3L4L2              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for B3L4L2 as seed ortholog is 83%.

Group of orthologs #115. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 P.knowlesi:466

F6V5U6              	100.00%		B3LAR4              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #116. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 P.knowlesi:464

F6XTJ3              	100.00%		B3L7S4              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for B3L7S4 as seed ortholog is 100%.

Group of orthologs #117. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.knowlesi:282

H2Y3E7              	100.00%		B3KZB3              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for B3KZB3 as seed ortholog is 100%.

Group of orthologs #118. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 P.knowlesi:340

Q8T3S5              	100.00%		B3L4N6              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for B3L4N6 as seed ortholog is 100%.

Group of orthologs #119. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 P.knowlesi:462

F6WAZ5              	100.00%		B3L6G7              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for B3L6G7 as seed ortholog is 100%.

Group of orthologs #120. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 P.knowlesi:244

F7AUJ3              	100.00%		B3KZ01              	100.00%
Bootstrap support for F7AUJ3 as seed ortholog is 100%.
Bootstrap support for B3KZ01 as seed ortholog is 99%.

Group of orthologs #121. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 P.knowlesi:459

F6PNS6              	100.00%		B3L2N9              	100.00%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for B3L2N9 as seed ortholog is 100%.

Group of orthologs #122. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.knowlesi:44

F6TVZ8              	100.00%		B3KZN7              	100.00%
Bootstrap support for F6TVZ8 as seed ortholog is 99%.
Bootstrap support for B3KZN7 as seed ortholog is 89%.

Group of orthologs #123. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 P.knowlesi:458

F6R2U8              	100.00%		B3LD39              	100.00%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for B3LD39 as seed ortholog is 100%.

Group of orthologs #124. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 P.knowlesi:457

F6W453              	100.00%		B3L299              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for B3L299 as seed ortholog is 100%.

Group of orthologs #125. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 P.knowlesi:457

F6Z7L9              	100.00%		B3L7W8              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for B3L7W8 as seed ortholog is 100%.

Group of orthologs #126. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 P.knowlesi:456

F6THL0              	100.00%		B3LBY6              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for B3LBY6 as seed ortholog is 100%.

Group of orthologs #127. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.knowlesi:246

F6WRK8              	100.00%		B3L8U0              	100.00%
Bootstrap support for F6WRK8 as seed ortholog is 87%.
Bootstrap support for B3L8U0 as seed ortholog is 99%.

Group of orthologs #128. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 P.knowlesi:453

F6W785              	100.00%		B3LA33              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for B3LA33 as seed ortholog is 100%.

Group of orthologs #129. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.knowlesi:159

F7BQ30              	100.00%		B3L4Y5              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 99%.
Bootstrap support for B3L4Y5 as seed ortholog is 99%.

Group of orthologs #130. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 P.knowlesi:446

F6QIX3              	100.00%		B3L694              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for B3L694 as seed ortholog is 100%.

Group of orthologs #131. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.knowlesi:445

F6XCK4              	100.00%		B3L654              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 78%.
Bootstrap support for B3L654 as seed ortholog is 100%.

Group of orthologs #132. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 P.knowlesi:164

F6UY41              	100.00%		B3L5K9              	100.00%
Bootstrap support for F6UY41 as seed ortholog is 100%.
Bootstrap support for B3L5K9 as seed ortholog is 98%.

Group of orthologs #133. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:441

F6SDI7              	100.00%		B3L5H4              	100.00%
F6VHP9              	7.08%		
F6W3R8              	7.08%		
Bootstrap support for F6SDI7 as seed ortholog is 99%.
Bootstrap support for B3L5H4 as seed ortholog is 100%.

Group of orthologs #134. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 P.knowlesi:360

F6Q0U4              	100.00%		B3L7W9              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for B3L7W9 as seed ortholog is 100%.

Group of orthologs #135. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 P.knowlesi:441

F6S6E8              	100.00%		B3LBE8              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for B3LBE8 as seed ortholog is 100%.

Group of orthologs #136. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 P.knowlesi:430

F7BA18              	100.00%		B3LBA5              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for B3LBA5 as seed ortholog is 100%.

Group of orthologs #137. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 P.knowlesi:430

H2XXZ7              	100.00%		B3L9D3              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for B3L9D3 as seed ortholog is 100%.

Group of orthologs #138. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 P.knowlesi:428

F6RKM9              	100.00%		B3L776              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for B3L776 as seed ortholog is 100%.

Group of orthologs #139. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 P.knowlesi:419

F6ZWW6              	100.00%		B3L3R5              	100.00%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #140. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 P.knowlesi:419

F6Z4G6              	100.00%		B3L5Z1              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for B3L5Z1 as seed ortholog is 100%.

Group of orthologs #141. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 P.knowlesi:417

F6SLC8              	100.00%		B3L0B3              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #142. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.knowlesi:254

F7AYB9              	100.00%		B3KZP7              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for B3KZP7 as seed ortholog is 100%.

Group of orthologs #143. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.knowlesi:416

H2XL55              	100.00%		B3L729              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 98%.
Bootstrap support for B3L729 as seed ortholog is 100%.

Group of orthologs #144. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 P.knowlesi:75

F6SZU4              	100.00%		B3L611              	100.00%
F6T060              	100.00%		
Bootstrap support for F6SZU4 as seed ortholog is 100%.
Bootstrap support for F6T060 as seed ortholog is 100%.
Bootstrap support for B3L611 as seed ortholog is 95%.

Group of orthologs #145. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 P.knowlesi:415

H2XPB4              	100.00%		B3LC85              	100.00%
Bootstrap support for H2XPB4 as seed ortholog is 100%.
Bootstrap support for B3LC85 as seed ortholog is 100%.

Group of orthologs #146. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.knowlesi:162

F6WI66              	100.00%		B3LCA3              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 100%.
Bootstrap support for B3LCA3 as seed ortholog is 99%.

Group of orthologs #147. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 P.knowlesi:413

F6SI15              	100.00%		B3L6L5              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for B3L6L5 as seed ortholog is 100%.

Group of orthologs #148. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 P.knowlesi:413

F6UH30              	100.00%		B3L6M4              	100.00%
Bootstrap support for F6UH30 as seed ortholog is 100%.
Bootstrap support for B3L6M4 as seed ortholog is 100%.

Group of orthologs #149. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 P.knowlesi:334

H2XJF4              	100.00%		B3LD11              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for B3LD11 as seed ortholog is 100%.

Group of orthologs #150. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 P.knowlesi:52

F7B991              	100.00%		B3L2U9              	100.00%
F6VAS2              	9.48%		
Bootstrap support for F7B991 as seed ortholog is 100%.
Bootstrap support for B3L2U9 as seed ortholog is 94%.

Group of orthologs #151. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 P.knowlesi:407

F6U609              	100.00%		B3L3M4              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for B3L3M4 as seed ortholog is 100%.

Group of orthologs #152. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 P.knowlesi:171

F6UI47              	100.00%		B3L7D9              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for B3L7D9 as seed ortholog is 99%.

Group of orthologs #153. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 P.knowlesi:405

F6ZBB5              	100.00%		B3L4D2              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for B3L4D2 as seed ortholog is 100%.

Group of orthologs #154. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:174

F7AA42              	100.00%		B3L0G9              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 99%.
Bootstrap support for B3L0G9 as seed ortholog is 99%.

Group of orthologs #155. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 P.knowlesi:303

H2Y2A4              	100.00%		B3L2Q5              	100.00%
Bootstrap support for H2Y2A4 as seed ortholog is 100%.
Bootstrap support for B3L2Q5 as seed ortholog is 100%.

Group of orthologs #156. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 P.knowlesi:403

F6R356              	100.00%		B3KZ79              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #157. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 P.knowlesi:400

F6QZB5              	100.00%		B3L422              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for B3L422 as seed ortholog is 100%.

Group of orthologs #158. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 P.knowlesi:225

F6TAK8              	100.00%		B3LAV4              	100.00%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for B3LAV4 as seed ortholog is 100%.

Group of orthologs #159. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.knowlesi:398

F6UCG0              	100.00%		B3KZ15              	100.00%
                    	       		B3LAB7              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 99%.
Bootstrap support for B3KZ15 as seed ortholog is 100%.
Bootstrap support for B3LAB7 as seed ortholog is 100%.

Group of orthologs #160. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 P.knowlesi:57

F6PMK8              	100.00%		B3L2D6              	100.00%
F6VF77              	7.06%		
Bootstrap support for F6PMK8 as seed ortholog is 100%.
Bootstrap support for B3L2D6 as seed ortholog is 84%.

Group of orthologs #161. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.knowlesi:72

H2XLI5              	100.00%		B3L454              	100.00%
H2XK85              	70.68%		
Bootstrap support for H2XLI5 as seed ortholog is 100%.
Bootstrap support for B3L454 as seed ortholog is 98%.

Group of orthologs #162. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 P.knowlesi:242

F6Z3S0              	100.00%		B3LCI0              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for B3LCI0 as seed ortholog is 100%.

Group of orthologs #163. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 P.knowlesi:391

F6XP34              	100.00%		B3L287              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #164. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 P.knowlesi:390

F7A5V7              	100.00%		B3L4H6              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for B3L4H6 as seed ortholog is 100%.

Group of orthologs #165. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.knowlesi:390

F6YIL9              	100.00%		B3LD69              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for B3LD69 as seed ortholog is 100%.

Group of orthologs #166. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.knowlesi:386

F6WIG7              	100.00%		B3LBS4              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for B3LBS4 as seed ortholog is 100%.

Group of orthologs #167. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:384

F7A4H8              	100.00%		B3LA75              	100.00%
Bootstrap support for F7A4H8 as seed ortholog is 92%.
Bootstrap support for B3LA75 as seed ortholog is 100%.

Group of orthologs #168. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 P.knowlesi:384

F7A5J2              	100.00%		B3LAT9              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for B3LAT9 as seed ortholog is 100%.

Group of orthologs #169. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:277

F6TIZ3              	100.00%		B3L8H3              	100.00%
F6QYE3              	14.05%		B3L6N3              	8.82%
F6W6J2              	12.10%		
Bootstrap support for F6TIZ3 as seed ortholog is 98%.
Bootstrap support for B3L8H3 as seed ortholog is 99%.

Group of orthologs #170. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 P.knowlesi:381

F6YVU0              	100.00%		B3LAN7              	100.00%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for B3LAN7 as seed ortholog is 100%.

Group of orthologs #171. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 P.knowlesi:379

F6XK10              	100.00%		B3L108              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for B3L108 as seed ortholog is 100%.

Group of orthologs #172. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.knowlesi:379

H2XLP3              	100.00%		B3L6T8              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for B3L6T8 as seed ortholog is 100%.

Group of orthologs #173. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.knowlesi:289

F6TX56              	100.00%		B3L8S5              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for B3L8S5 as seed ortholog is 100%.

Group of orthologs #174. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 P.knowlesi:300

F6ZC49              	100.00%		B3L0L1              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for B3L0L1 as seed ortholog is 100%.

Group of orthologs #175. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.knowlesi:34

F6RW91              	100.00%		B3L193              	100.00%
Bootstrap support for F6RW91 as seed ortholog is 65%.
Alternative seed ortholog is F6ZFK4 (13 bits away from this cluster)
Bootstrap support for B3L193 as seed ortholog is 85%.

Group of orthologs #176. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:370

F6UGA6              	100.00%		B3L1X3              	100.00%
Bootstrap support for F6UGA6 as seed ortholog is 97%.
Bootstrap support for B3L1X3 as seed ortholog is 100%.

Group of orthologs #177. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:370

F6SG33              	100.00%		B3L878              	100.00%
Bootstrap support for F6SG33 as seed ortholog is 99%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #178. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 P.knowlesi:370

F6WAD4              	100.00%		B3L4H0              	100.00%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for B3L4H0 as seed ortholog is 100%.

Group of orthologs #179. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 P.knowlesi:368

F6Q601              	100.00%		B3L6V4              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for B3L6V4 as seed ortholog is 100%.

Group of orthologs #180. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.knowlesi:367

F6UTV1              	100.00%		B3L4N7              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for B3L4N7 as seed ortholog is 100%.

Group of orthologs #181. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.knowlesi:274

F6WUJ1              	100.00%		B3L1F8              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for B3L1F8 as seed ortholog is 93%.

Group of orthologs #182. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.knowlesi:111

Q9NL43              	100.00%		B3L472              	100.00%
Bootstrap support for Q9NL43 as seed ortholog is 100%.
Bootstrap support for B3L472 as seed ortholog is 99%.

Group of orthologs #183. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 P.knowlesi:365

F6UF05              	100.00%		B3KZH9              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for B3KZH9 as seed ortholog is 100%.

Group of orthologs #184. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.knowlesi:363

F6WLA0              	100.00%		B3LC69              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for B3LC69 as seed ortholog is 100%.

Group of orthologs #185. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.knowlesi:363

F7AVN1              	100.00%		B3L8F2              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for B3L8F2 as seed ortholog is 100%.

Group of orthologs #186. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.knowlesi:363

H2XWE4              	100.00%		B3L9U8              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #187. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.knowlesi:196

H2XQT6              	100.00%		B3L873              	100.00%
H2XYB3              	13.71%		
Bootstrap support for H2XQT6 as seed ortholog is 100%.
Bootstrap support for B3L873 as seed ortholog is 99%.

Group of orthologs #188. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.knowlesi:361

F6SK29              	100.00%		B3L122              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for B3L122 as seed ortholog is 100%.

Group of orthologs #189. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 P.knowlesi:361

F6PP44              	100.00%		B3L9W9              	100.00%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for B3L9W9 as seed ortholog is 100%.

Group of orthologs #190. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 P.knowlesi:264

F6Q096              	100.00%		B3L699              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for B3L699 as seed ortholog is 100%.

Group of orthologs #191. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 P.knowlesi:252

F7B040              	100.00%		B3L4U7              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for B3L4U7 as seed ortholog is 100%.

Group of orthologs #192. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.knowlesi:219

F6ZN89              	100.00%		B3L749              	100.00%
Bootstrap support for F6ZN89 as seed ortholog is 100%.
Bootstrap support for B3L749 as seed ortholog is 100%.

Group of orthologs #193. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.knowlesi:356

F7AX62              	100.00%		B3L9N1              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for B3L9N1 as seed ortholog is 100%.

Group of orthologs #194. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 P.knowlesi:354

F6VVR6              	100.00%		B3LAE9              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 99%.
Bootstrap support for B3LAE9 as seed ortholog is 100%.

Group of orthologs #195. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.knowlesi:254

F7A606              	100.00%		B3LBF1              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for B3LBF1 as seed ortholog is 100%.

Group of orthologs #196. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.knowlesi:352

F6UF57              	100.00%		B3L4Y1              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for B3L4Y1 as seed ortholog is 100%.

Group of orthologs #197. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.knowlesi:352

H2XU13              	100.00%		B3L1Y4              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for B3L1Y4 as seed ortholog is 100%.

Group of orthologs #198. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 P.knowlesi:212

H2XUE4              	100.00%		B3L070              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for B3L070 as seed ortholog is 99%.

Group of orthologs #199. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 P.knowlesi:349

F6TD07              	100.00%		B3LAN9              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for B3LAN9 as seed ortholog is 100%.

Group of orthologs #200. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 P.knowlesi:349

F6Z6H7              	100.00%		B3LA92              	100.00%
Bootstrap support for F6Z6H7 as seed ortholog is 100%.
Bootstrap support for B3LA92 as seed ortholog is 100%.

Group of orthologs #201. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.knowlesi:306

H2XS68              	100.00%		B3L2D4              	100.00%
H2XK79              	85.89%		
Bootstrap support for H2XS68 as seed ortholog is 100%.
Bootstrap support for B3L2D4 as seed ortholog is 100%.

Group of orthologs #202. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 P.knowlesi:113

F6S399              	100.00%		B3L8R5              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for B3L8R5 as seed ortholog is 98%.

Group of orthologs #203. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 P.knowlesi:348

F6ZZJ8              	100.00%		B3L4Q7              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for B3L4Q7 as seed ortholog is 100%.

Group of orthologs #204. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 P.knowlesi:347

F6XQD4              	100.00%		B3KZP9              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for B3KZP9 as seed ortholog is 100%.

Group of orthologs #205. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.knowlesi:227

F6QI83              	100.00%		B3L014              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for B3L014 as seed ortholog is 100%.

Group of orthologs #206. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.knowlesi:346

F6USH9              	100.00%		B3L2M5              	100.00%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for B3L2M5 as seed ortholog is 100%.

Group of orthologs #207. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.knowlesi:342

F6TGH1              	100.00%		B3L520              	100.00%
F7AVY6              	7.86%		
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for B3L520 as seed ortholog is 100%.

Group of orthologs #208. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.knowlesi:149

F6WMK2              	100.00%		B3LBA1              	100.00%
Bootstrap support for F6WMK2 as seed ortholog is 100%.
Bootstrap support for B3LBA1 as seed ortholog is 99%.

Group of orthologs #209. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.knowlesi:342

H2Y2G1              	100.00%		B3KZ23              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for B3KZ23 as seed ortholog is 100%.

Group of orthologs #210. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 P.knowlesi:128

F6RHH3              	100.00%		B3L711              	100.00%
Bootstrap support for F6RHH3 as seed ortholog is 100%.
Bootstrap support for B3L711 as seed ortholog is 99%.

Group of orthologs #211. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 P.knowlesi:338

F6PX61              	100.00%		B3L7J6              	100.00%
Bootstrap support for F6PX61 as seed ortholog is 100%.
Bootstrap support for B3L7J6 as seed ortholog is 100%.

Group of orthologs #212. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:338

F6RNS7              	100.00%		B3L9J0              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 99%.
Bootstrap support for B3L9J0 as seed ortholog is 100%.

Group of orthologs #213. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 P.knowlesi:146

F6WR85              	100.00%		B3LCW5              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for B3LCW5 as seed ortholog is 99%.

Group of orthologs #214. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.knowlesi:159

F7ARV5              	100.00%		B3L755              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 98%.
Bootstrap support for B3L755 as seed ortholog is 99%.

Group of orthologs #215. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.knowlesi:337

F6ZGX7              	100.00%		B3L2K6              	100.00%
F6ZGZ0              	51.81%		
F6XH38              	33.26%		
Bootstrap support for F6ZGX7 as seed ortholog is 100%.
Bootstrap support for B3L2K6 as seed ortholog is 100%.

Group of orthologs #216. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.knowlesi:337

F7B4V9              	100.00%		B3L0G0              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for B3L0G0 as seed ortholog is 100%.

Group of orthologs #217. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.knowlesi:337

F7B580              	100.00%		B3L4J2              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for B3L4J2 as seed ortholog is 100%.

Group of orthologs #218. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.knowlesi:205

F6PH07              	100.00%		B3L322              	100.00%
H2XXD3              	6.41%		
Bootstrap support for F6PH07 as seed ortholog is 99%.
Bootstrap support for B3L322 as seed ortholog is 100%.

Group of orthologs #219. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.knowlesi:336

F6UHI7              	100.00%		B3L021              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for B3L021 as seed ortholog is 100%.

Group of orthologs #220. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 P.knowlesi:336

H2XXL7              	100.00%		B3L4Y8              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for B3L4Y8 as seed ortholog is 100%.

Group of orthologs #221. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 P.knowlesi:334

F7BLS5              	100.00%		B3L8L1              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for B3L8L1 as seed ortholog is 100%.

Group of orthologs #222. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.knowlesi:332

F6UBT3              	100.00%		B3L310              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for B3L310 as seed ortholog is 100%.

Group of orthologs #223. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 P.knowlesi:332

F6RMU1              	100.00%		B3LC55              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for B3LC55 as seed ortholog is 100%.

Group of orthologs #224. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 P.knowlesi:332

F6UHM2              	100.00%		B3L7D0              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for B3L7D0 as seed ortholog is 100%.

Group of orthologs #225. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 P.knowlesi:331

F6QIK7              	100.00%		B3L3C9              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for B3L3C9 as seed ortholog is 100%.

Group of orthologs #226. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:228

F6XSL1              	100.00%		B3L6A1              	100.00%
F6PJ70              	8.25%		
Bootstrap support for F6XSL1 as seed ortholog is 98%.
Bootstrap support for B3L6A1 as seed ortholog is 100%.

Group of orthologs #227. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.knowlesi:329

F6ST44              	100.00%		B3L8C2              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 63%.
Alternative seed ortholog is F6WDL0 (20 bits away from this cluster)
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #228. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 P.knowlesi:329

F6XC92              	100.00%		B3L623              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for B3L623 as seed ortholog is 100%.

Group of orthologs #229. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.knowlesi:328

F6YNG6              	100.00%		B3L712              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 100%.
Bootstrap support for B3L712 as seed ortholog is 100%.

Group of orthologs #230. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.knowlesi:327

F6WWC7              	100.00%		B3LA52              	100.00%
Bootstrap support for F6WWC7 as seed ortholog is 99%.
Bootstrap support for B3LA52 as seed ortholog is 100%.

Group of orthologs #231. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.knowlesi:132

F7ADN1              	100.00%		B3L6H8              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for B3L6H8 as seed ortholog is 100%.

Group of orthologs #232. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.knowlesi:326

F6ZX12              	100.00%		B3LCC4              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for B3LCC4 as seed ortholog is 100%.

Group of orthologs #233. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.knowlesi:231

F6XBC5              	100.00%		B3L4H5              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 99%.
Bootstrap support for B3L4H5 as seed ortholog is 100%.

Group of orthologs #234. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 P.knowlesi:325

F7BDV2              	100.00%		B3LDE8              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for B3LDE8 as seed ortholog is 100%.

Group of orthologs #235. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.knowlesi:322

F6X3Q7              	100.00%		B3L2A8              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for B3L2A8 as seed ortholog is 100%.

Group of orthologs #236. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.knowlesi:257

F6SBG8              	100.00%		B3L1F7              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 99%.
Bootstrap support for B3L1F7 as seed ortholog is 99%.

Group of orthologs #237. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 P.knowlesi:321

F6XKA2              	100.00%		B3KYY6              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for B3KYY6 as seed ortholog is 100%.

Group of orthologs #238. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 P.knowlesi:320

F6UMX9              	100.00%		B3L5B4              	100.00%
Bootstrap support for F6UMX9 as seed ortholog is 100%.
Bootstrap support for B3L5B4 as seed ortholog is 100%.

Group of orthologs #239. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 P.knowlesi:320

H2XJK0              	100.00%		B3L7F1              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for B3L7F1 as seed ortholog is 100%.

Group of orthologs #240. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.knowlesi:319

F6R8V3              	100.00%		B3LCC3              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for B3LCC3 as seed ortholog is 100%.

Group of orthologs #241. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 P.knowlesi:318

F6RA65              	100.00%		B3L1M7              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for B3L1M7 as seed ortholog is 100%.

Group of orthologs #242. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 P.knowlesi:318

F6YIU2              	100.00%		B3L0L0              	100.00%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for B3L0L0 as seed ortholog is 100%.

Group of orthologs #243. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.knowlesi:317

F6TBI8              	100.00%		B3L1L0              	100.00%
                    	       		B3L992              	99.72%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for B3L1L0 as seed ortholog is 100%.

Group of orthologs #244. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.knowlesi:317

F6W8G0              	100.00%		B3LCJ0              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for B3LCJ0 as seed ortholog is 100%.

Group of orthologs #245. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:196

F6S4F7              	100.00%		B3LDB1              	100.00%
Bootstrap support for F6S4F7 as seed ortholog is 99%.
Bootstrap support for B3LDB1 as seed ortholog is 100%.

Group of orthologs #246. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.knowlesi:316

F7APS6              	100.00%		B3L7B6              	100.00%
Bootstrap support for F7APS6 as seed ortholog is 100%.
Bootstrap support for B3L7B6 as seed ortholog is 100%.

Group of orthologs #247. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 P.knowlesi:315

F6YHB0              	100.00%		B3L831              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for B3L831 as seed ortholog is 100%.

Group of orthologs #248. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.knowlesi:312

F6U3Q1              	100.00%		B3L5A0              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for B3L5A0 as seed ortholog is 100%.

Group of orthologs #249. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.knowlesi:231

F7AZV0              	100.00%		B3LC21              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for B3LC21 as seed ortholog is 100%.

Group of orthologs #250. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 P.knowlesi:312

H2Y3D5              	100.00%		B3L3U5              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for B3L3U5 as seed ortholog is 100%.

Group of orthologs #251. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.knowlesi:310

F6TJB5              	100.00%		B3L8J0              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for B3L8J0 as seed ortholog is 100%.

Group of orthologs #252. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.knowlesi:310

F6SBF1              	100.00%		B3LD14              	100.00%
Bootstrap support for F6SBF1 as seed ortholog is 100%.
Bootstrap support for B3LD14 as seed ortholog is 100%.

Group of orthologs #253. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.knowlesi:310

F6Z743              	100.00%		B3LA93              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for B3LA93 as seed ortholog is 100%.

Group of orthologs #254. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 P.knowlesi:309

F7AX37              	100.00%		B3L4G8              	100.00%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for B3L4G8 as seed ortholog is 100%.

Group of orthologs #255. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 P.knowlesi:308

F6SQQ1              	100.00%		B3L8Q5              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for B3L8Q5 as seed ortholog is 100%.

Group of orthologs #256. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 P.knowlesi:178

F6YC60              	100.00%		B3L1K2              	100.00%
Bootstrap support for F6YC60 as seed ortholog is 56%.
Alternative seed ortholog is F6ZSR8 (30 bits away from this cluster)
Bootstrap support for B3L1K2 as seed ortholog is 100%.

Group of orthologs #257. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.knowlesi:307

F7A8H3              	100.00%		B3LBC7              	100.00%
F6XJD6              	30.68%		
F7A4Y2              	17.05%		
F6SE21              	5.02%		
Bootstrap support for F7A8H3 as seed ortholog is 100%.
Bootstrap support for B3LBC7 as seed ortholog is 100%.

Group of orthologs #258. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.knowlesi:307

F6QF37              	100.00%		B3L781              	100.00%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for B3L781 as seed ortholog is 100%.

Group of orthologs #259. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:13

F6X2D1              	100.00%		B3L6N0              	100.00%
Bootstrap support for F6X2D1 as seed ortholog is 88%.
Bootstrap support for B3L6N0 as seed ortholog is 54%.
Alternative seed ortholog is B3KZR4 (13 bits away from this cluster)

Group of orthologs #260. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.knowlesi:305

H2XQE4              	100.00%		B3L268              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 100%.

Group of orthologs #261. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.knowlesi:303

F7BIS1              	100.00%		B3L6H1              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for B3L6H1 as seed ortholog is 100%.

Group of orthologs #262. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 P.knowlesi:178

F7AVB6              	100.00%		B3LAI0              	100.00%
Bootstrap support for F7AVB6 as seed ortholog is 100%.
Bootstrap support for B3LAI0 as seed ortholog is 99%.

Group of orthologs #263. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 P.knowlesi:302

H2Y130              	100.00%		B3L0I9              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for B3L0I9 as seed ortholog is 100%.

Group of orthologs #264. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.knowlesi:301

F6VC80              	100.00%		B3L212              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for B3L212 as seed ortholog is 100%.

Group of orthologs #265. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.knowlesi:299

F6VL61              	100.00%		B3L4A4              	100.00%
F6VKS9              	20.86%		
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for B3L4A4 as seed ortholog is 100%.

Group of orthologs #266. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.knowlesi:297

F6YHS8              	100.00%		B3L1T8              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for B3L1T8 as seed ortholog is 100%.

Group of orthologs #267. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.knowlesi:174

F7BHM4              	100.00%		B3L6M6              	100.00%
Bootstrap support for F7BHM4 as seed ortholog is 98%.
Bootstrap support for B3L6M6 as seed ortholog is 100%.

Group of orthologs #268. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.knowlesi:297

H2XKW2              	100.00%		B3LD81              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for B3LD81 as seed ortholog is 100%.

Group of orthologs #269. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.knowlesi:296

F6XKQ1              	100.00%		B3L430              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for B3L430 as seed ortholog is 100%.

Group of orthologs #270. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.knowlesi:204

F6WL19              	100.00%		B3L1B8              	100.00%
F6TNW3              	32.68%		
Bootstrap support for F6WL19 as seed ortholog is 98%.
Bootstrap support for B3L1B8 as seed ortholog is 100%.

Group of orthologs #271. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.knowlesi:295

F6WWD5              	100.00%		B3KZ18              	100.00%
Bootstrap support for F6WWD5 as seed ortholog is 100%.
Bootstrap support for B3KZ18 as seed ortholog is 100%.

Group of orthologs #272. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.knowlesi:294

F6TXT5              	100.00%		B3L9A1              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for B3L9A1 as seed ortholog is 100%.

Group of orthologs #273. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.knowlesi:294

H2XVC3              	100.00%		B3LB03              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for B3LB03 as seed ortholog is 100%.

Group of orthologs #274. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.knowlesi:292

F6VRH3              	100.00%		B3KZC4              	100.00%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for B3KZC4 as seed ortholog is 100%.

Group of orthologs #275. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:291

F6U113              	100.00%		B3KZ33              	100.00%
Bootstrap support for F6U113 as seed ortholog is 96%.
Bootstrap support for B3KZ33 as seed ortholog is 100%.

Group of orthologs #276. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 P.knowlesi:291

F6VCH9              	100.00%		B3L5H2              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for B3L5H2 as seed ortholog is 100%.

Group of orthologs #277. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.knowlesi:224

H2Y040              	100.00%		B3L1W8              	100.00%
Bootstrap support for H2Y040 as seed ortholog is 92%.
Bootstrap support for B3L1W8 as seed ortholog is 100%.

Group of orthologs #278. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.knowlesi:289

F6ZLM3              	100.00%		B3L5A9              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for B3L5A9 as seed ortholog is 100%.

Group of orthologs #279. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:86

F6YGC1              	100.00%		B3LDG0              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 97%.
Bootstrap support for B3LDG0 as seed ortholog is 98%.

Group of orthologs #280. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.knowlesi:288

H2XZG0              	100.00%		B3LCG6              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for B3LCG6 as seed ortholog is 100%.

Group of orthologs #281. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.knowlesi:287

F6UNP2              	100.00%		B3L228              	100.00%
F7B1X4              	5.37%		
Bootstrap support for F6UNP2 as seed ortholog is 100%.
Bootstrap support for B3L228 as seed ortholog is 100%.

Group of orthologs #282. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.knowlesi:287

H2XZT6              	100.00%		B3L5A2              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for B3L5A2 as seed ortholog is 100%.

Group of orthologs #283. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 P.knowlesi:286

F7BMR9              	100.00%		B3LB36              	100.00%
Bootstrap support for F7BMR9 as seed ortholog is 100%.
Bootstrap support for B3LB36 as seed ortholog is 100%.

Group of orthologs #284. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.knowlesi:285

F6UPC7              	100.00%		B3LA05              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for B3LA05 as seed ortholog is 100%.

Group of orthologs #285. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.knowlesi:285

F7BCV4              	100.00%		B3LBU1              	100.00%
Bootstrap support for F7BCV4 as seed ortholog is 100%.
Bootstrap support for B3LBU1 as seed ortholog is 100%.

Group of orthologs #286. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.knowlesi:285

H2XZM3              	100.00%		B3L7S7              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for B3L7S7 as seed ortholog is 100%.

Group of orthologs #287. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.knowlesi:284

F6UZS7              	100.00%		B3L4U8              	100.00%
                    	       		B3LCF6              	7.01%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for B3L4U8 as seed ortholog is 100%.

Group of orthologs #288. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.knowlesi:284

F7B658              	100.00%		B3L9S4              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for B3L9S4 as seed ortholog is 100%.

Group of orthologs #289. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.knowlesi:283

H2Y307              	100.00%		B3L3N6              	100.00%
Bootstrap support for H2Y307 as seed ortholog is 96%.
Bootstrap support for B3L3N6 as seed ortholog is 100%.

Group of orthologs #290. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.knowlesi:282

H2XL83              	100.00%		B3L0S1              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for B3L0S1 as seed ortholog is 100%.

Group of orthologs #291. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.knowlesi:119

F6S0X0              	100.00%		B3L0A3              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 99%.
Bootstrap support for B3L0A3 as seed ortholog is 98%.

Group of orthologs #292. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 P.knowlesi:281

F7BJC2              	100.00%		B3L2T6              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for B3L2T6 as seed ortholog is 100%.

Group of orthologs #293. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 P.knowlesi:281

F7A172              	100.00%		B3LAE0              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for B3LAE0 as seed ortholog is 100%.

Group of orthologs #294. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 P.knowlesi:281

H2Y2S2              	100.00%		B3L5I1              	100.00%
Bootstrap support for H2Y2S2 as seed ortholog is 100%.
Bootstrap support for B3L5I1 as seed ortholog is 100%.

Group of orthologs #295. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:97

F6PKL5              	100.00%		B3LBB4              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 99%.
Bootstrap support for B3LBB4 as seed ortholog is 99%.

Group of orthologs #296. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.knowlesi:280

F6SSM8              	100.00%		B3L6J8              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for B3L6J8 as seed ortholog is 100%.

Group of orthologs #297. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.knowlesi:280

F6SSW4              	100.00%		B3L7E4              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for B3L7E4 as seed ortholog is 100%.

Group of orthologs #298. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.knowlesi:109

H2Y1B2              	100.00%		B3LCV2              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 96%.
Bootstrap support for B3LCV2 as seed ortholog is 100%.

Group of orthologs #299. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.knowlesi:279

F6RN60              	100.00%		B3L1G8              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for B3L1G8 as seed ortholog is 100%.

Group of orthologs #300. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.knowlesi:279

F6TFE2              	100.00%		B3L640              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for B3L640 as seed ortholog is 100%.

Group of orthologs #301. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 P.knowlesi:278

F6TLL4              	100.00%		B3L598              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for B3L598 as seed ortholog is 100%.

Group of orthologs #302. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 P.knowlesi:188

F7B2M5              	100.00%		B3LCP1              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for B3LCP1 as seed ortholog is 99%.

Group of orthologs #303. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.knowlesi:277

F6VXM8              	100.00%		B3L6H3              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 99%.
Bootstrap support for B3L6H3 as seed ortholog is 100%.

Group of orthologs #304. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.knowlesi:95

F6XCQ7              	100.00%		B3LC19              	100.00%
Bootstrap support for F6XCQ7 as seed ortholog is 99%.
Bootstrap support for B3LC19 as seed ortholog is 99%.

Group of orthologs #305. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.knowlesi:277

F7BML6              	100.00%		B3L1W1              	100.00%
Bootstrap support for F7BML6 as seed ortholog is 100%.
Bootstrap support for B3L1W1 as seed ortholog is 100%.

Group of orthologs #306. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.knowlesi:135

F6R5L0              	100.00%		B3L8Y4              	100.00%
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for B3L8Y4 as seed ortholog is 99%.

Group of orthologs #307. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.knowlesi:276

H2Y0R2              	100.00%		B3L9C8              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for B3L9C8 as seed ortholog is 100%.

Group of orthologs #308. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:153

F6T2A6              	100.00%		B3LBF2              	100.00%
F6T2C1              	54.55%		
Bootstrap support for F6T2A6 as seed ortholog is 100%.
Bootstrap support for B3LBF2 as seed ortholog is 100%.

Group of orthologs #309. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 P.knowlesi:275

F6Z1E3              	100.00%		B3L3W7              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for B3L3W7 as seed ortholog is 100%.

Group of orthologs #310. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.knowlesi:274

F6Q8V8              	100.00%		B3L0A6              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.

Group of orthologs #311. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.knowlesi:274

F6U8C7              	100.00%		B3L691              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for B3L691 as seed ortholog is 100%.

Group of orthologs #312. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.knowlesi:274

F6VKI2              	100.00%		B3L8A8              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for B3L8A8 as seed ortholog is 100%.

Group of orthologs #313. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:28

F7BAT7              	100.00%		B3L0Z7              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 99%.
Bootstrap support for B3L0Z7 as seed ortholog is 84%.

Group of orthologs #314. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.knowlesi:273

F6ZCS4              	100.00%		B3L7E0              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for B3L7E0 as seed ortholog is 100%.

Group of orthologs #315. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.knowlesi:272

F6QRJ2              	100.00%		B3LB10              	100.00%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for B3LB10 as seed ortholog is 100%.

Group of orthologs #316. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.knowlesi:272

F6UFF5              	100.00%		B3L5M0              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 100%.
Bootstrap support for B3L5M0 as seed ortholog is 100%.

Group of orthologs #317. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.knowlesi:272

F6XQM9              	100.00%		B3LBL4              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for B3LBL4 as seed ortholog is 100%.

Group of orthologs #318. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.knowlesi:123

H2XUE3              	100.00%		B3L7X1              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for B3L7X1 as seed ortholog is 100%.

Group of orthologs #319. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.knowlesi:272

H2XX53              	100.00%		B3L6C5              	100.00%
Bootstrap support for H2XX53 as seed ortholog is 72%.
Alternative seed ortholog is F6X1K6 (29 bits away from this cluster)
Bootstrap support for B3L6C5 as seed ortholog is 100%.

Group of orthologs #320. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.knowlesi:271

F7A8S2              	100.00%		B3KZD2              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for B3KZD2 as seed ortholog is 100%.

Group of orthologs #321. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.knowlesi:271

H2XYE1              	100.00%		B3LDA2              	100.00%
Bootstrap support for H2XYE1 as seed ortholog is 94%.
Bootstrap support for B3LDA2 as seed ortholog is 100%.

Group of orthologs #322. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.knowlesi:271

Q1RLD5              	100.00%		B3L7V3              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for B3L7V3 as seed ortholog is 100%.

Group of orthologs #323. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:99

F6W8K8              	100.00%		B3L646              	100.00%
Bootstrap support for F6W8K8 as seed ortholog is 97%.
Bootstrap support for B3L646 as seed ortholog is 96%.

Group of orthologs #324. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:148

F6XT60              	100.00%		B3L342              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 99%.
Bootstrap support for B3L342 as seed ortholog is 100%.

Group of orthologs #325. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:51

H2XL87              	100.00%		B3L6D9              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 97%.
Bootstrap support for B3L6D9 as seed ortholog is 97%.

Group of orthologs #326. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.knowlesi:268

F6PGX9              	100.00%		B3LCT1              	100.00%
F6V2Z5              	23.97%		
F6T8N6              	20.88%		
F6Q5Y8              	17.51%		
Bootstrap support for F6PGX9 as seed ortholog is 100%.
Bootstrap support for B3LCT1 as seed ortholog is 100%.

Group of orthologs #327. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.knowlesi:268

F6Z3U3              	100.00%		B3L5Q6              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for B3L5Q6 as seed ortholog is 100%.

Group of orthologs #328. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.knowlesi:175

F6ZKW1              	100.00%		B3L4Y0              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for B3L4Y0 as seed ortholog is 100%.

Group of orthologs #329. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.knowlesi:268

F6Y1N2              	100.00%		B3L9E8              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for B3L9E8 as seed ortholog is 100%.

Group of orthologs #330. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.knowlesi:267

F6TQ79              	100.00%		B3L6G1              	100.00%
Bootstrap support for F6TQ79 as seed ortholog is 99%.
Bootstrap support for B3L6G1 as seed ortholog is 100%.

Group of orthologs #331. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:131

F6VL41              	100.00%		B3LA59              	100.00%
F6YBW0              	12.96%		B3L0M2              	39.67%
                    	       		B3KZU8              	23.28%
Bootstrap support for F6VL41 as seed ortholog is 99%.
Bootstrap support for B3LA59 as seed ortholog is 99%.

Group of orthologs #332. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.knowlesi:265

F6TEN3              	100.00%		B3L9M5              	100.00%
F6W3N0              	14.47%		
Bootstrap support for F6TEN3 as seed ortholog is 100%.
Bootstrap support for B3L9M5 as seed ortholog is 100%.

Group of orthologs #333. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.knowlesi:265

F6XDI5              	100.00%		B3L9B3              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for B3L9B3 as seed ortholog is 100%.

Group of orthologs #334. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.knowlesi:265

F6Y1Q3              	100.00%		B3LCR8              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for B3LCR8 as seed ortholog is 100%.

Group of orthologs #335. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.knowlesi:265

H2XTB0              	100.00%		B3L230              	100.00%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #336. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.knowlesi:178

F6RKQ2              	100.00%		B3L4B2              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 99%.
Bootstrap support for B3L4B2 as seed ortholog is 99%.

Group of orthologs #337. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.knowlesi:94

F6QE16              	100.00%		B3L8B6              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for B3L8B6 as seed ortholog is 99%.

Group of orthologs #338. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.knowlesi:264

H2XVQ9              	100.00%		B3L665              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #339. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.knowlesi:263

Q4H2R2              	100.00%		B3LA03              	100.00%
F6VQ10              	83.15%		
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for B3LA03 as seed ortholog is 100%.

Group of orthologs #340. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.knowlesi:263

F6WLN1              	100.00%		B3KZJ7              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for B3KZJ7 as seed ortholog is 100%.

Group of orthologs #341. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.knowlesi:263

H2XWZ3              	100.00%		B3L783              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for B3L783 as seed ortholog is 100%.

Group of orthologs #342. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.knowlesi:262

F6ZFS8              	100.00%		B3L8I7              	100.00%
F6UR25              	21.41%		
Bootstrap support for F6ZFS8 as seed ortholog is 100%.
Bootstrap support for B3L8I7 as seed ortholog is 100%.

Group of orthologs #343. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 P.knowlesi:261

F6W2M8              	100.00%		B3L504              	100.00%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for B3L504 as seed ortholog is 100%.

Group of orthologs #344. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 P.knowlesi:261

H2XPV7              	100.00%		B3L2C8              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for B3L2C8 as seed ortholog is 100%.

Group of orthologs #345. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.knowlesi:260

F6SJ40              	100.00%		B3L094              	100.00%
Bootstrap support for F6SJ40 as seed ortholog is 99%.
Bootstrap support for B3L094 as seed ortholog is 100%.

Group of orthologs #346. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.knowlesi:260

F6YM02              	100.00%		B3L3M9              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for B3L3M9 as seed ortholog is 100%.

Group of orthologs #347. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.knowlesi:260

F7ATT1              	100.00%		B3L0H3              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for B3L0H3 as seed ortholog is 100%.

Group of orthologs #348. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:259

F7B7E9              	100.00%		B3L2B7              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 99%.
Bootstrap support for B3L2B7 as seed ortholog is 100%.

Group of orthologs #349. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.knowlesi:258

H2Y0A5              	100.00%		B3L1H7              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for B3L1H7 as seed ortholog is 100%.

Group of orthologs #350. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.knowlesi:113

F6Z491              	100.00%		B3KZR0              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for B3KZR0 as seed ortholog is 100%.

Group of orthologs #351. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:257

F6ZVC8              	100.00%		B3L3C0              	100.00%
Bootstrap support for F6ZVC8 as seed ortholog is 99%.
Bootstrap support for B3L3C0 as seed ortholog is 100%.

Group of orthologs #352. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.knowlesi:257

F6YA95              	100.00%		B3LA31              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for B3LA31 as seed ortholog is 100%.

Group of orthologs #353. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.knowlesi:84

F6QIM1              	100.00%		B3KZK4              	100.00%
Bootstrap support for F6QIM1 as seed ortholog is 100%.
Bootstrap support for B3KZK4 as seed ortholog is 100%.

Group of orthologs #354. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.knowlesi:255

F6SNL0              	100.00%		B3L086              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for B3L086 as seed ortholog is 100%.

Group of orthologs #355. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:255

F7BEI8              	100.00%		B3L7E2              	100.00%
Bootstrap support for F7BEI8 as seed ortholog is 99%.
Bootstrap support for B3L7E2 as seed ortholog is 100%.

Group of orthologs #356. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.knowlesi:156

F7A9Y8              	100.00%		B3L9W3              	100.00%
Bootstrap support for F7A9Y8 as seed ortholog is 99%.
Bootstrap support for B3L9W3 as seed ortholog is 99%.

Group of orthologs #357. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.knowlesi:73

F6UK45              	100.00%		B3KZG3              	100.00%
Bootstrap support for F6UK45 as seed ortholog is 100%.
Bootstrap support for B3KZG3 as seed ortholog is 89%.

Group of orthologs #358. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.knowlesi:253

F6UA87              	100.00%		B3L830              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for B3L830 as seed ortholog is 100%.

Group of orthologs #359. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.knowlesi:116

F6XTY4              	100.00%		B3L9H5              	100.00%
Bootstrap support for F6XTY4 as seed ortholog is 99%.
Bootstrap support for B3L9H5 as seed ortholog is 99%.

Group of orthologs #360. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.knowlesi:252

F7B1W3              	100.00%		B3L7H0              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #361. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.knowlesi:97

F6RIY5              	100.00%		B3L120              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for B3L120 as seed ortholog is 99%.

Group of orthologs #362. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.knowlesi:251

F6UK82              	100.00%		B3LAC9              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 85%.
Bootstrap support for B3LAC9 as seed ortholog is 100%.

Group of orthologs #363. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.knowlesi:251

F6Z2U1              	100.00%		B3L436              	100.00%
Bootstrap support for F6Z2U1 as seed ortholog is 100%.
Bootstrap support for B3L436 as seed ortholog is 100%.

Group of orthologs #364. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.knowlesi:250

F6QDE3              	100.00%		B3KZK7              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for B3KZK7 as seed ortholog is 100%.

Group of orthologs #365. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.knowlesi:197

H2XVD5              	100.00%		B3L8V3              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for B3L8V3 as seed ortholog is 100%.

Group of orthologs #366. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.knowlesi:248

H2XT98              	100.00%		B3L1D8              	100.00%
                    	       		B3L4M7              	7.83%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for B3L1D8 as seed ortholog is 100%.

Group of orthologs #367. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.knowlesi:248

H2Y1I4              	100.00%		B3L8C3              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for B3L8C3 as seed ortholog is 100%.

Group of orthologs #368. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.knowlesi:247

F6V766              	100.00%		B3LDC3              	100.00%
Bootstrap support for F6V766 as seed ortholog is 100%.
Bootstrap support for B3LDC3 as seed ortholog is 100%.

Group of orthologs #369. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 P.knowlesi:246

F6W790              	100.00%		B3L0S2              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for B3L0S2 as seed ortholog is 100%.

Group of orthologs #370. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 P.knowlesi:47

F7BKD9              	100.00%		B3L3U6              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for B3L3U6 as seed ortholog is 91%.

Group of orthologs #371. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.knowlesi:115

H2XK16              	100.00%		B3L7V1              	100.00%
F7AHT0              	90.00%		B3L7M9              	26.32%
Bootstrap support for H2XK16 as seed ortholog is 100%.
Bootstrap support for B3L7V1 as seed ortholog is 100%.

Group of orthologs #372. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.knowlesi:245

F6QE47              	100.00%		B3L739              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for B3L739 as seed ortholog is 100%.

Group of orthologs #373. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.knowlesi:243

F6UJ45              	100.00%		B3L4G3              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 99%.
Bootstrap support for B3L4G3 as seed ortholog is 100%.

Group of orthologs #374. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.knowlesi:242

F7B593              	100.00%		B3L3B3              	100.00%
Bootstrap support for F7B593 as seed ortholog is 100%.
Bootstrap support for B3L3B3 as seed ortholog is 100%.

Group of orthologs #375. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.knowlesi:185

H2XYW0              	100.00%		B3L3E0              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 99%.
Bootstrap support for B3L3E0 as seed ortholog is 100%.

Group of orthologs #376. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.knowlesi:241

F6SZ37              	100.00%		B3LD49              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for B3LD49 as seed ortholog is 100%.

Group of orthologs #377. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.knowlesi:240

F6T9R1              	100.00%		B3L6A6              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #378. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.knowlesi:240

F6ZP02              	100.00%		B3L5D4              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for B3L5D4 as seed ortholog is 100%.

Group of orthologs #379. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.knowlesi:240

H2XM91              	100.00%		B3LD25              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for B3LD25 as seed ortholog is 100%.

Group of orthologs #380. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.knowlesi:240

H2XYL3              	100.00%		B3L9D4              	100.00%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for B3L9D4 as seed ortholog is 100%.

Group of orthologs #381. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 P.knowlesi:111

F6Y5B7              	100.00%		B3LB25              	100.00%
F6Y615              	16.22%		
F6Y4V4              	14.86%		
Bootstrap support for F6Y5B7 as seed ortholog is 95%.
Bootstrap support for B3LB25 as seed ortholog is 100%.

Group of orthologs #382. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 P.knowlesi:239

F6WJQ0              	100.00%		B3LAL7              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for B3LAL7 as seed ortholog is 100%.

Group of orthologs #383. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.knowlesi:238

F6U2U3              	100.00%		B3L3R6              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for B3L3R6 as seed ortholog is 100%.

Group of orthologs #384. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.knowlesi:237

F6YXI8              	100.00%		B3LAV2              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for B3LAV2 as seed ortholog is 100%.

Group of orthologs #385. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.knowlesi:237

Q1RPZ2              	100.00%		B3L7K8              	100.00%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for B3L7K8 as seed ortholog is 100%.

Group of orthologs #386. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:236

F6XWW8              	100.00%		B3LAS6              	100.00%
H2XYU0              	6.79%		
Bootstrap support for F6XWW8 as seed ortholog is 98%.
Bootstrap support for B3LAS6 as seed ortholog is 100%.

Group of orthologs #387. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.knowlesi:235

F6WBA4              	100.00%		B3L3Y9              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for B3L3Y9 as seed ortholog is 100%.

Group of orthologs #388. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.knowlesi:235

F6W9I8              	100.00%		B3LA78              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 99%.
Bootstrap support for B3LA78 as seed ortholog is 100%.

Group of orthologs #389. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:170

H2XLJ3              	100.00%		B3L2B5              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 99%.
Bootstrap support for B3L2B5 as seed ortholog is 100%.

Group of orthologs #390. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.knowlesi:235

F7BDE0              	100.00%		B3L984              	100.00%
Bootstrap support for F7BDE0 as seed ortholog is 100%.
Bootstrap support for B3L984 as seed ortholog is 100%.

Group of orthologs #391. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.knowlesi:234

F7B1Y1              	100.00%		B3L4C7              	100.00%
Q8I7D5              	88.14%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #392. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.knowlesi:234

F6YYA5              	100.00%		B3L0B9              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for B3L0B9 as seed ortholog is 100%.

Group of orthologs #393. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.knowlesi:104

F6ZGG6              	100.00%		B3L6U8              	100.00%
Bootstrap support for F6ZGG6 as seed ortholog is 100%.
Bootstrap support for B3L6U8 as seed ortholog is 100%.

Group of orthologs #394. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.knowlesi:233

F6S8Z0              	100.00%		B3KZF5              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 99%.
Bootstrap support for B3KZF5 as seed ortholog is 100%.

Group of orthologs #395. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.knowlesi:233

H2XLC1              	100.00%		B3L2Z8              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for B3L2Z8 as seed ortholog is 100%.

Group of orthologs #396. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.knowlesi:232

F6R683              	100.00%		B3LAH8              	100.00%
Bootstrap support for F6R683 as seed ortholog is 100%.
Bootstrap support for B3LAH8 as seed ortholog is 100%.

Group of orthologs #397. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.knowlesi:89

F6T0J5              	100.00%		B3L786              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for B3L786 as seed ortholog is 99%.

Group of orthologs #398. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.knowlesi:232

F7AMR5              	100.00%		B3L8H9              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for B3L8H9 as seed ortholog is 100%.

Group of orthologs #399. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.knowlesi:231

F6SUP0              	100.00%		B3LAC7              	100.00%
F6X753              	5.56%		
Bootstrap support for F6SUP0 as seed ortholog is 78%.
Bootstrap support for B3LAC7 as seed ortholog is 100%.

Group of orthologs #400. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.knowlesi:230

F6RC25              	100.00%		B3L3Q4              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for B3L3Q4 as seed ortholog is 100%.

Group of orthologs #401. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.knowlesi:229

F6WUM1              	100.00%		B3LCP7              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for B3LCP7 as seed ortholog is 100%.

Group of orthologs #402. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.knowlesi:228

F6XIP9              	100.00%		B3L3L2              	100.00%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for B3L3L2 as seed ortholog is 100%.

Group of orthologs #403. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.knowlesi:228

H2Y288              	100.00%		B3L9P8              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for B3L9P8 as seed ortholog is 100%.

Group of orthologs #404. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.knowlesi:227

H2Y395              	100.00%		B3L008              	100.00%
F6U7Z2              	10.10%		
Bootstrap support for H2Y395 as seed ortholog is 100%.
Bootstrap support for B3L008 as seed ortholog is 100%.

Group of orthologs #405. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.knowlesi:227

F6X3S3              	100.00%		B3L0B0              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for B3L0B0 as seed ortholog is 100%.

Group of orthologs #406. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.knowlesi:93

F6QWS2              	100.00%		B3L111              	100.00%
F6WYW5              	11.83%		
Bootstrap support for F6QWS2 as seed ortholog is 95%.
Bootstrap support for B3L111 as seed ortholog is 96%.

Group of orthologs #407. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.knowlesi:225

F6XRI7              	100.00%		B3L0G6              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for B3L0G6 as seed ortholog is 100%.

Group of orthologs #408. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.knowlesi:225

H2XUA5              	100.00%		B3L0U1              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for B3L0U1 as seed ortholog is 100%.

Group of orthologs #409. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.knowlesi:80

F6R3W0              	100.00%		B3L5Q4              	100.00%
Bootstrap support for F6R3W0 as seed ortholog is 100%.
Bootstrap support for B3L5Q4 as seed ortholog is 99%.

Group of orthologs #410. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.knowlesi:126

H2Y2K5              	100.00%		B3L2K3              	100.00%
F6VXL3              	41.89%		
Bootstrap support for H2Y2K5 as seed ortholog is 99%.
Bootstrap support for B3L2K3 as seed ortholog is 99%.

Group of orthologs #411. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.knowlesi:52

Q4H3L5              	100.00%		B3L4U0              	100.00%
F6TI28              	5.25%		
Bootstrap support for Q4H3L5 as seed ortholog is 86%.
Bootstrap support for B3L4U0 as seed ortholog is 91%.

Group of orthologs #412. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.knowlesi:223

F6SS61              	100.00%		B3L1T3              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for B3L1T3 as seed ortholog is 100%.

Group of orthologs #413. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.knowlesi:223

F6RGI4              	100.00%		B3L698              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for B3L698 as seed ortholog is 100%.

Group of orthologs #414. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.knowlesi:223

F6Q4K7              	100.00%		B3LAS9              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for B3LAS9 as seed ortholog is 100%.

Group of orthologs #415. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.knowlesi:32

F7B9D6              	100.00%		B3L498              	100.00%
F6Z9D3              	100.00%		B3L0H8              	100.00%
F7ATZ1              	12.28%		
F6SUL1              	10.04%		
Bootstrap support for F7B9D6 as seed ortholog is 94%.
Bootstrap support for F6Z9D3 as seed ortholog is 89%.
Bootstrap support for B3L498 as seed ortholog is 72%.
Alternative seed ortholog is B3LD00 (32 bits away from this cluster)
Bootstrap support for B3L0H8 as seed ortholog is 56%.
Alternative seed ortholog is B3LD00 (32 bits away from this cluster)

Group of orthologs #416. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.knowlesi:222

F6STU7              	100.00%		B3L2J5              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for B3L2J5 as seed ortholog is 100%.

Group of orthologs #417. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:222

F7B0I1              	100.00%		B3LAY5              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 91%.
Bootstrap support for B3LAY5 as seed ortholog is 100%.

Group of orthologs #418. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:222

Q1RLA5              	100.00%		B3L4Z6              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 99%.
Bootstrap support for B3L4Z6 as seed ortholog is 100%.

Group of orthologs #419. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.knowlesi:220

F6PRY2              	100.00%		B3KZA8              	100.00%
Bootstrap support for F6PRY2 as seed ortholog is 100%.
Bootstrap support for B3KZA8 as seed ortholog is 100%.

Group of orthologs #420. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:141

F6TXW3              	100.00%		B3L6W2              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for B3L6W2 as seed ortholog is 100%.

Group of orthologs #421. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.knowlesi:85

F7A771              	100.00%		B3KZA2              	100.00%
Bootstrap support for F7A771 as seed ortholog is 99%.
Bootstrap support for B3KZA2 as seed ortholog is 99%.

Group of orthologs #422. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:134

F6XGG4              	100.00%		B3L3M8              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 99%.
Bootstrap support for B3L3M8 as seed ortholog is 100%.

Group of orthologs #423. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.knowlesi:219

F7BBJ9              	100.00%		B3L9V4              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for B3L9V4 as seed ortholog is 100%.

Group of orthologs #424. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.knowlesi:219

H2XY27              	100.00%		B3L0V2              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for B3L0V2 as seed ortholog is 100%.

Group of orthologs #425. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.knowlesi:162

F6RGE7              	100.00%		B3L1J2              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 99%.
Bootstrap support for B3L1J2 as seed ortholog is 100%.

Group of orthologs #426. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:218

F6U1E2              	100.00%		B3L838              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 99%.
Bootstrap support for B3L838 as seed ortholog is 100%.

Group of orthologs #427. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.knowlesi:218

F6S8B5              	100.00%		B3LCL9              	100.00%
Bootstrap support for F6S8B5 as seed ortholog is 69%.
Alternative seed ortholog is F7B2Q7 (16 bits away from this cluster)
Bootstrap support for B3LCL9 as seed ortholog is 100%.

Group of orthologs #428. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:28

F6QXH6              	100.00%		B3L3Y1              	100.00%
F6UAF0              	33.87%		
H2XNB4              	29.84%		
F6RCT7              	29.84%		
Bootstrap support for F6QXH6 as seed ortholog is 98%.
Bootstrap support for B3L3Y1 as seed ortholog is 87%.

Group of orthologs #429. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.knowlesi:217

F6XBT4              	100.00%		B3L7Q9              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for B3L7Q9 as seed ortholog is 100%.

Group of orthologs #430. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.knowlesi:217

F7ASN6              	100.00%		B3L3T0              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for B3L3T0 as seed ortholog is 100%.

Group of orthologs #431. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.knowlesi:217

F7B2R9              	100.00%		B3L752              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for B3L752 as seed ortholog is 100%.

Group of orthologs #432. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:86

F6UAX7              	100.00%		B3L970              	100.00%
Bootstrap support for F6UAX7 as seed ortholog is 99%.
Bootstrap support for B3L970 as seed ortholog is 99%.

Group of orthologs #433. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.knowlesi:216

F6YRR0              	100.00%		B3L3H1              	100.00%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for B3L3H1 as seed ortholog is 100%.

Group of orthologs #434. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.knowlesi:216

H2XQ81              	100.00%		B3L1B5              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for B3L1B5 as seed ortholog is 100%.

Group of orthologs #435. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:215

F6X3X4              	100.00%		B3L152              	100.00%
Bootstrap support for F6X3X4 as seed ortholog is 98%.
Bootstrap support for B3L152 as seed ortholog is 100%.

Group of orthologs #436. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:215

F6VKA0              	100.00%		B3L632              	100.00%
Bootstrap support for F6VKA0 as seed ortholog is 99%.
Bootstrap support for B3L632 as seed ortholog is 100%.

Group of orthologs #437. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:93

F7AFR6              	100.00%		B3L024              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 99%.
Bootstrap support for B3L024 as seed ortholog is 98%.

Group of orthologs #438. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.knowlesi:106

F6VFC5              	100.00%		B3L542              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for B3L542 as seed ortholog is 99%.

Group of orthologs #439. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.knowlesi:55

F6S1S7              	100.00%		B3KZK6              	100.00%
Bootstrap support for F6S1S7 as seed ortholog is 99%.
Bootstrap support for B3KZK6 as seed ortholog is 96%.

Group of orthologs #440. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.knowlesi:213

F6PKA8              	100.00%		B3L8F0              	100.00%
Bootstrap support for F6PKA8 as seed ortholog is 100%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #441. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:105

F6S2W5              	100.00%		B3L5Z0              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 99%.
Bootstrap support for B3L5Z0 as seed ortholog is 100%.

Group of orthologs #442. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.knowlesi:213

F6X600              	100.00%		B3L7Y4              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for B3L7Y4 as seed ortholog is 100%.

Group of orthologs #443. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.knowlesi:213

F7BF26              	100.00%		B3L4B7              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for B3L4B7 as seed ortholog is 100%.

Group of orthologs #444. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.knowlesi:213

F7AH61              	100.00%		B3LAL0              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for B3LAL0 as seed ortholog is 100%.

Group of orthologs #445. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.knowlesi:212

F6U9X5              	100.00%		B3LAD9              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for B3LAD9 as seed ortholog is 100%.

Group of orthologs #446. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.knowlesi:212

F6WZS8              	100.00%		B3LA90              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for B3LA90 as seed ortholog is 100%.

Group of orthologs #447. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.knowlesi:116

F6ZJP7              	100.00%		B3L4W6              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for B3L4W6 as seed ortholog is 100%.

Group of orthologs #448. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.knowlesi:88

F6WTG3              	100.00%		B3L728              	100.00%
F6TIY7              	15.17%		B3LAR8              	18.47%
Bootstrap support for F6WTG3 as seed ortholog is 100%.
Bootstrap support for B3L728 as seed ortholog is 99%.

Group of orthologs #449. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.knowlesi:211

H2XTB6              	100.00%		B3L3Y2              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for B3L3Y2 as seed ortholog is 100%.

Group of orthologs #450. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.knowlesi:211

H2Y3Q6              	100.00%		B3L6W6              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for B3L6W6 as seed ortholog is 100%.

Group of orthologs #451. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.knowlesi:97

F6RUQ3              	100.00%		B3KZ72              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for B3KZ72 as seed ortholog is 99%.

Group of orthologs #452. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.knowlesi:210

F6UE24              	100.00%		B3L0E1              	100.00%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for B3L0E1 as seed ortholog is 100%.

Group of orthologs #453. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 P.knowlesi:210

F6R4T5              	100.00%		B3LBY0              	100.00%
Bootstrap support for F6R4T5 as seed ortholog is 98%.
Bootstrap support for B3LBY0 as seed ortholog is 100%.

Group of orthologs #454. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.knowlesi:210

F6WXC5              	100.00%		B3LB98              	100.00%
Bootstrap support for F6WXC5 as seed ortholog is 95%.
Bootstrap support for B3LB98 as seed ortholog is 100%.

Group of orthologs #455. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.knowlesi:209

F6ULY5              	100.00%		B3LBH0              	100.00%
Bootstrap support for F6ULY5 as seed ortholog is 100%.
Bootstrap support for B3LBH0 as seed ortholog is 100%.

Group of orthologs #456. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.knowlesi:209

F7B5P4              	100.00%		B3LD82              	100.00%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for B3LD82 as seed ortholog is 100%.

Group of orthologs #457. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.knowlesi:208

F6XIQ9              	100.00%		B3L0V6              	100.00%
F7AJP1              	20.90%		
Bootstrap support for F6XIQ9 as seed ortholog is 100%.
Bootstrap support for B3L0V6 as seed ortholog is 100%.

Group of orthologs #458. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.knowlesi:79

F6RID7              	100.00%		B3LA18              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for B3LA18 as seed ortholog is 99%.

Group of orthologs #459. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.knowlesi:208

F6Y6X7              	100.00%		B3L7M5              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for B3L7M5 as seed ortholog is 100%.

Group of orthologs #460. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.knowlesi:92

F6YI64              	100.00%		B3LA43              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for B3LA43 as seed ortholog is 99%.

Group of orthologs #461. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.knowlesi:208

H2XJG6              	100.00%		B3L6X3              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for B3L6X3 as seed ortholog is 100%.

Group of orthologs #462. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.knowlesi:208

H2XQ03              	100.00%		B3L8F7              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 81%.
Bootstrap support for B3L8F7 as seed ortholog is 100%.

Group of orthologs #463. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.knowlesi:208

H2XWU7              	100.00%		B3L895              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for B3L895 as seed ortholog is 100%.

Group of orthologs #464. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.knowlesi:107

F6PTJ9              	100.00%		B3L5J3              	100.00%
Bootstrap support for F6PTJ9 as seed ortholog is 99%.
Bootstrap support for B3L5J3 as seed ortholog is 100%.

Group of orthologs #465. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.knowlesi:126

F6T1J8              	100.00%		B3L2P9              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 100%.
Bootstrap support for B3L2P9 as seed ortholog is 99%.

Group of orthologs #466. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.knowlesi:207

F6Q512              	100.00%		B3LBE4              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for B3LBE4 as seed ortholog is 100%.

Group of orthologs #467. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.knowlesi:207

F6UGM6              	100.00%		B3L8I5              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for B3L8I5 as seed ortholog is 100%.

Group of orthologs #468. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.knowlesi:207

F6YBU7              	100.00%		B3L5N9              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for B3L5N9 as seed ortholog is 100%.

Group of orthologs #469. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.knowlesi:207

F7ASJ4              	100.00%		B3L367              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for B3L367 as seed ortholog is 100%.

Group of orthologs #470. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.knowlesi:207

H2XR71              	100.00%		B3L312              	100.00%
Bootstrap support for H2XR71 as seed ortholog is 100%.
Bootstrap support for B3L312 as seed ortholog is 100%.

Group of orthologs #471. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.knowlesi:206

H2XU57              	100.00%		B3L734              	100.00%
Q8I7D6              	97.89%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for B3L734 as seed ortholog is 100%.

Group of orthologs #472. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.knowlesi:206

F6UDY1              	100.00%		B3L2Z6              	100.00%
Bootstrap support for F6UDY1 as seed ortholog is 100%.
Bootstrap support for B3L2Z6 as seed ortholog is 100%.

Group of orthologs #473. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.knowlesi:67

F6VBD0              	100.00%		B3KZ85              	100.00%
H2XWC3              	17.36%		
F6X313              	12.35%		
Bootstrap support for F6VBD0 as seed ortholog is 100%.
Bootstrap support for B3KZ85 as seed ortholog is 89%.

Group of orthologs #474. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.knowlesi:205

F6SIX8              	100.00%		B3L1E6              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for B3L1E6 as seed ortholog is 100%.

Group of orthologs #475. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.knowlesi:105

H2XMB6              	100.00%		B3L2G9              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 99%.
Bootstrap support for B3L2G9 as seed ortholog is 99%.

Group of orthologs #476. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.knowlesi:205

H2XVP1              	100.00%		B3LAY2              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for B3LAY2 as seed ortholog is 100%.

Group of orthologs #477. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.knowlesi:58

F6R589              	100.00%		B3L702              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for B3L702 as seed ortholog is 95%.

Group of orthologs #478. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.knowlesi:204

F6QBM2              	100.00%		B3LC03              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for B3LC03 as seed ortholog is 100%.

Group of orthologs #479. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.knowlesi:203

F7ADF2              	100.00%		B3KZC5              	100.00%
H2XQS5              	54.62%		
Bootstrap support for F7ADF2 as seed ortholog is 100%.
Bootstrap support for B3KZC5 as seed ortholog is 100%.

Group of orthologs #480. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:63

H2XMA1              	100.00%		B3L239              	100.00%
Bootstrap support for H2XMA1 as seed ortholog is 100%.
Bootstrap support for B3L239 as seed ortholog is 99%.

Group of orthologs #481. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.knowlesi:203

F6ZRT4              	100.00%		B3LCD7              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 100%.
Bootstrap support for B3LCD7 as seed ortholog is 100%.

Group of orthologs #482. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.knowlesi:203

H2Y2W2              	100.00%		B3KZK0              	100.00%
Bootstrap support for H2Y2W2 as seed ortholog is 68%.
Alternative seed ortholog is F6RCK1 (22 bits away from this cluster)
Bootstrap support for B3KZK0 as seed ortholog is 100%.

Group of orthologs #483. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.knowlesi:109

F6TQG1              	100.00%		B3L398              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for B3L398 as seed ortholog is 99%.

Group of orthologs #484. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.knowlesi:202

F7BNW5              	100.00%		B3LAB0              	100.00%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for B3LAB0 as seed ortholog is 100%.

Group of orthologs #485. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:114

F6PJV8              	100.00%		B3L761              	100.00%
Bootstrap support for F6PJV8 as seed ortholog is 98%.
Bootstrap support for B3L761 as seed ortholog is 100%.

Group of orthologs #486. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.knowlesi:200

F6UUA2              	100.00%		B3KZQ8              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for B3KZQ8 as seed ortholog is 100%.

Group of orthologs #487. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.knowlesi:200

F6TBF9              	100.00%		B3LBQ5              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for B3LBQ5 as seed ortholog is 100%.

Group of orthologs #488. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.knowlesi:200

F7B2L3              	100.00%		B3LBZ3              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #489. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.knowlesi:131

H2XRD4              	100.00%		B3L9Z7              	100.00%
Bootstrap support for H2XRD4 as seed ortholog is 98%.
Bootstrap support for B3L9Z7 as seed ortholog is 99%.

Group of orthologs #490. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.knowlesi:200

H2XYT3              	100.00%		B3L580              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for B3L580 as seed ortholog is 100%.

Group of orthologs #491. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:25

H2XRU5              	100.00%		B3LC83              	100.00%
Bootstrap support for H2XRU5 as seed ortholog is 99%.
Bootstrap support for B3LC83 as seed ortholog is 87%.

Group of orthologs #492. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.knowlesi:200

I6L7H7              	100.00%		B3L2G0              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for B3L2G0 as seed ortholog is 100%.

Group of orthologs #493. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.knowlesi:199

F6YH10              	100.00%		B3L3C1              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for B3L3C1 as seed ortholog is 100%.

Group of orthologs #494. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.knowlesi:75

F6TYS5              	100.00%		B3L5X6              	100.00%
Bootstrap support for F6TYS5 as seed ortholog is 100%.
Bootstrap support for B3L5X6 as seed ortholog is 99%.

Group of orthologs #495. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.knowlesi:198

F6Y7E9              	100.00%		B3L4C5              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for B3L4C5 as seed ortholog is 100%.

Group of orthologs #496. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.knowlesi:36

F7AG96              	100.00%		B3KZ74              	100.00%
Bootstrap support for F7AG96 as seed ortholog is 88%.
Bootstrap support for B3KZ74 as seed ortholog is 87%.

Group of orthologs #497. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.knowlesi:198

F6ZN66              	100.00%		B3L904              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for B3L904 as seed ortholog is 100%.

Group of orthologs #498. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.knowlesi:197

F6YLI3              	100.00%		B3L7G9              	100.00%
H2XKD1              	28.44%		
H2XUD0              	27.00%		
Bootstrap support for F6YLI3 as seed ortholog is 100%.
Bootstrap support for B3L7G9 as seed ortholog is 100%.

Group of orthologs #499. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.knowlesi:197

F6TMB1              	100.00%		B3L1A5              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for B3L1A5 as seed ortholog is 100%.

Group of orthologs #500. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.knowlesi:47

F6W6I5              	100.00%		B3L068              	100.00%
F6W2N4              	7.25%		
Bootstrap support for F6W6I5 as seed ortholog is 79%.
Bootstrap support for B3L068 as seed ortholog is 90%.

Group of orthologs #501. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.knowlesi:3

F6Z8I3              	100.00%		B3KZH1              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 99%.
Bootstrap support for B3KZH1 as seed ortholog is 70%.
Alternative seed ortholog is B3LBG1 (3 bits away from this cluster)

Group of orthologs #502. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:70

F7B7G6              	100.00%		B3LD60              	100.00%
Bootstrap support for F7B7G6 as seed ortholog is 93%.
Bootstrap support for B3LD60 as seed ortholog is 91%.

Group of orthologs #503. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.knowlesi:32

F6PJL4              	100.00%		B3L8L4              	100.00%
F6QMD4              	8.37%		
F6R6I1              	7.95%		
F6VXQ6              	6.90%		
Bootstrap support for F6PJL4 as seed ortholog is 68%.
Alternative seed ortholog is H2XLH6 (20 bits away from this cluster)
Bootstrap support for B3L8L4 as seed ortholog is 70%.
Alternative seed ortholog is B3LBW6 (32 bits away from this cluster)

Group of orthologs #504. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.knowlesi:96

Q8I7E2              	100.00%		B3L789              	100.00%
H2XWN2              	8.05%		
Bootstrap support for Q8I7E2 as seed ortholog is 100%.
Bootstrap support for B3L789 as seed ortholog is 99%.

Group of orthologs #505. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.knowlesi:66

F6UUI1              	100.00%		B3L4Y4              	100.00%
Bootstrap support for F6UUI1 as seed ortholog is 99%.
Bootstrap support for B3L4Y4 as seed ortholog is 99%.

Group of orthologs #506. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.knowlesi:95

H2XZQ0              	100.00%		B3L291              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 99%.
Bootstrap support for B3L291 as seed ortholog is 99%.

Group of orthologs #507. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.knowlesi:193

F6PKT6              	100.00%		B3L3R7              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for B3L3R7 as seed ortholog is 100%.

Group of orthologs #508. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.knowlesi:192

F6RZU6              	100.00%		B3L635              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for B3L635 as seed ortholog is 100%.

Group of orthologs #509. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.knowlesi:192

F6VMS4              	100.00%		B3L625              	100.00%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for B3L625 as seed ortholog is 100%.

Group of orthologs #510. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.knowlesi:192

F7AAC1              	100.00%		B3L8Z3              	100.00%
Bootstrap support for F7AAC1 as seed ortholog is 100%.
Bootstrap support for B3L8Z3 as seed ortholog is 100%.

Group of orthologs #511. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.knowlesi:191

F6WYT3              	100.00%		B3L191              	100.00%
H2XRA0              	23.81%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for B3L191 as seed ortholog is 100%.

Group of orthologs #512. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.knowlesi:191

F7BBQ5              	100.00%		B3L6V5              	100.00%
F6YB01              	40.00%		
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #513. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.knowlesi:191

F6QY24              	100.00%		B3L5F7              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for B3L5F7 as seed ortholog is 100%.

Group of orthologs #514. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.knowlesi:191

F6TJ64              	100.00%		B3L963              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for B3L963 as seed ortholog is 100%.

Group of orthologs #515. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.knowlesi:191

H2XNG1              	100.00%		B3L1Y5              	100.00%
Bootstrap support for H2XNG1 as seed ortholog is 100%.
Bootstrap support for B3L1Y5 as seed ortholog is 100%.

Group of orthologs #516. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:190

F6RTW0              	100.00%		B3L3R9              	100.00%
H2XPX9              	18.89%		
Bootstrap support for F6RTW0 as seed ortholog is 89%.
Bootstrap support for B3L3R9 as seed ortholog is 100%.

Group of orthologs #517. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.knowlesi:116

F6PW34              	100.00%		B3L163              	100.00%
Bootstrap support for F6PW34 as seed ortholog is 99%.
Bootstrap support for B3L163 as seed ortholog is 99%.

Group of orthologs #518. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.knowlesi:190

F6SSX2              	100.00%		B3L9V6              	100.00%
Bootstrap support for F6SSX2 as seed ortholog is 93%.
Bootstrap support for B3L9V6 as seed ortholog is 100%.

Group of orthologs #519. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.knowlesi:37

F6TZU9              	100.00%		B3L8Z0              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for B3L8Z0 as seed ortholog is 45%.
Alternative seed ortholog is B3LAT1 (37 bits away from this cluster)

Group of orthologs #520. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 P.knowlesi:190

F6XYB7              	100.00%		B3LDC2              	100.00%
Bootstrap support for F6XYB7 as seed ortholog is 52%.
Alternative seed ortholog is F6YCY6 (2 bits away from this cluster)
Bootstrap support for B3LDC2 as seed ortholog is 100%.

Group of orthologs #521. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.knowlesi:190

F6YY79              	100.00%		B3LCS1              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for B3LCS1 as seed ortholog is 100%.

Group of orthologs #522. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 P.knowlesi:189

F6RLX1              	100.00%		B3L3Z2              	100.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for B3L3Z2 as seed ortholog is 100%.

Group of orthologs #523. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:188

F6TIU3              	100.00%		B3L059              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 99%.
Bootstrap support for B3L059 as seed ortholog is 100%.

Group of orthologs #524. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.knowlesi:188

F6V9A1              	100.00%		B3L435              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for B3L435 as seed ortholog is 100%.

Group of orthologs #525. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.knowlesi:188

F6XIZ4              	100.00%		B3L6I5              	100.00%
Bootstrap support for F6XIZ4 as seed ortholog is 100%.
Bootstrap support for B3L6I5 as seed ortholog is 100%.

Group of orthologs #526. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.knowlesi:188

F6YGG6              	100.00%		B3L9F2              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for B3L9F2 as seed ortholog is 100%.

Group of orthologs #527. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.knowlesi:188

F7AD97              	100.00%		B3L8Z7              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for B3L8Z7 as seed ortholog is 100%.

Group of orthologs #528. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.knowlesi:187

F6PM63              	100.00%		B3L8I0              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for B3L8I0 as seed ortholog is 100%.

Group of orthologs #529. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.knowlesi:187

F6VHI4              	100.00%		B3LAE7              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for B3LAE7 as seed ortholog is 100%.

Group of orthologs #530. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.knowlesi:187

H2XXH1              	100.00%		B3LC68              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #531. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.knowlesi:187

L7N0S3              	100.00%		B3L9T7              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 94%.
Bootstrap support for B3L9T7 as seed ortholog is 100%.

Group of orthologs #532. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.knowlesi:187

Q68A31              	100.00%		B3L9J5              	100.00%
Bootstrap support for Q68A31 as seed ortholog is 100%.
Bootstrap support for B3L9J5 as seed ortholog is 100%.

Group of orthologs #533. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.knowlesi:186

F6Q0S7              	100.00%		B3LBW4              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for B3LBW4 as seed ortholog is 100%.

Group of orthologs #534. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.knowlesi:186

F7BHB2              	100.00%		B3L8G3              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for B3L8G3 as seed ortholog is 100%.

Group of orthologs #535. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.knowlesi:185

F6X0L7              	100.00%		B3L6Y9              	100.00%
Bootstrap support for F6X0L7 as seed ortholog is 100%.
Bootstrap support for B3L6Y9 as seed ortholog is 100%.

Group of orthologs #536. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.knowlesi:53

F7A0P0              	100.00%		B3L807              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 85%.
Bootstrap support for B3L807 as seed ortholog is 93%.

Group of orthologs #537. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.knowlesi:185

F6ZWA3              	100.00%		B3LAC8              	100.00%
Bootstrap support for F6ZWA3 as seed ortholog is 100%.
Bootstrap support for B3LAC8 as seed ortholog is 100%.

Group of orthologs #538. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.knowlesi:184

F6RHG2              	100.00%		B3LAU3              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for B3LAU3 as seed ortholog is 100%.

Group of orthologs #539. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.knowlesi:184

F6TB52              	100.00%		B3L879              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for B3L879 as seed ortholog is 100%.

Group of orthologs #540. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.knowlesi:183

H2XU41              	100.00%		B3LA28              	100.00%
F6QQZ3              	28.72%		B3LCE5              	15.09%
Q68A28              	25.68%		
Bootstrap support for H2XU41 as seed ortholog is 100%.
Bootstrap support for B3LA28 as seed ortholog is 100%.

Group of orthologs #541. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:183

H2Y2C6              	100.00%		B3L5C6              	100.00%
F6W8D0              	7.21%		
Bootstrap support for H2Y2C6 as seed ortholog is 97%.
Bootstrap support for B3L5C6 as seed ortholog is 100%.

Group of orthologs #542. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.knowlesi:183

F6TJ76              	100.00%		B3KZJ5              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for B3KZJ5 as seed ortholog is 100%.

Group of orthologs #543. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.knowlesi:183

F6U602              	100.00%		B3LB55              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for B3LB55 as seed ortholog is 100%.

Group of orthologs #544. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.knowlesi:183

F6WUG3              	100.00%		B3L5W9              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for B3L5W9 as seed ortholog is 100%.

Group of orthologs #545. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.knowlesi:183

F6YTX7              	100.00%		B3LD90              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for B3LD90 as seed ortholog is 100%.

Group of orthologs #546. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.knowlesi:183

H2XKP7              	100.00%		B3LC53              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 76%.
Bootstrap support for B3LC53 as seed ortholog is 100%.

Group of orthologs #547. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.knowlesi:182

F6XER0              	100.00%		B3L1J9              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for B3L1J9 as seed ortholog is 100%.

Group of orthologs #548. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.knowlesi:181

F6S8S3              	100.00%		B3L7T1              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for B3L7T1 as seed ortholog is 100%.

Group of orthologs #549. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.knowlesi:181

H2XK69              	100.00%		B3L2P4              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for B3L2P4 as seed ortholog is 100%.

Group of orthologs #550. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.knowlesi:180

F6PPC0              	100.00%		B3L8K9              	100.00%
Bootstrap support for F6PPC0 as seed ortholog is 100%.
Bootstrap support for B3L8K9 as seed ortholog is 100%.

Group of orthologs #551. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:180

F6TTI3              	100.00%		B3L5Y9              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 98%.
Bootstrap support for B3L5Y9 as seed ortholog is 100%.

Group of orthologs #552. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.knowlesi:57

F6ZRB6              	100.00%		B3L441              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for B3L441 as seed ortholog is 98%.

Group of orthologs #553. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:7

H2Y0H5              	100.00%		B3LAT3              	100.00%
Bootstrap support for H2Y0H5 as seed ortholog is 99%.
Bootstrap support for B3LAT3 as seed ortholog is 61%.
Alternative seed ortholog is B3LA89 (7 bits away from this cluster)

Group of orthologs #554. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.knowlesi:179

F7B0J8              	100.00%		B3L2N7              	100.00%
Bootstrap support for F7B0J8 as seed ortholog is 100%.
Bootstrap support for B3L2N7 as seed ortholog is 100%.

Group of orthologs #555. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.knowlesi:178

F6QID5              	100.00%		B3L7R7              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for B3L7R7 as seed ortholog is 100%.

Group of orthologs #556. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.knowlesi:38

F6V8V5              	100.00%		B3L480              	100.00%
Bootstrap support for F6V8V5 as seed ortholog is 99%.
Bootstrap support for B3L480 as seed ortholog is 81%.

Group of orthologs #557. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.knowlesi:177

F6QI05              	100.00%		B3L7N0              	100.00%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for B3L7N0 as seed ortholog is 100%.

Group of orthologs #558. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.knowlesi:176

F6YEQ8              	100.00%		B3LBB3              	100.00%
                    	       		B3L4E9              	76.94%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for B3LBB3 as seed ortholog is 100%.

Group of orthologs #559. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.knowlesi:70

F6UUI8              	100.00%		B3L5E5              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for B3L5E5 as seed ortholog is 91%.

Group of orthologs #560. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 P.knowlesi:4

F6ZMB2              	100.00%		B3L603              	100.00%
Bootstrap support for F6ZMB2 as seed ortholog is 74%.
Alternative seed ortholog is F6YEI6 (21 bits away from this cluster)
Bootstrap support for B3L603 as seed ortholog is 56%.
Alternative seed ortholog is B3L082 (4 bits away from this cluster)

Group of orthologs #561. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.knowlesi:174

F6X0N8              	100.00%		B3L8R9              	100.00%
L7N0S6              	85.79%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for B3L8R9 as seed ortholog is 100%.

Group of orthologs #562. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.knowlesi:174

F6QHP8              	100.00%		B3L593              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for B3L593 as seed ortholog is 100%.

Group of orthologs #563. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.knowlesi:174

F6U019              	100.00%		B3L4X4              	100.00%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for B3L4X4 as seed ortholog is 100%.

Group of orthologs #564. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.knowlesi:173

F6PW28              	100.00%		B3LC99              	100.00%
F6Z726              	14.70%		
F6SBC7              	9.51%		
F6R472              	8.05%		
Bootstrap support for F6PW28 as seed ortholog is 100%.
Bootstrap support for B3LC99 as seed ortholog is 100%.

Group of orthologs #565. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.knowlesi:173

F6S4Q0              	100.00%		B3L9Q8              	100.00%
F6U8Z7              	11.94%		
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for B3L9Q8 as seed ortholog is 100%.

Group of orthologs #566. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.knowlesi:173

F6RXW9              	100.00%		B3L673              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for B3L673 as seed ortholog is 100%.

Group of orthologs #567. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 P.knowlesi:74

F6TMT5              	100.00%		B3L2M7              	100.00%
Bootstrap support for F6TMT5 as seed ortholog is 69%.
Alternative seed ortholog is F6XWG9 (12 bits away from this cluster)
Bootstrap support for B3L2M7 as seed ortholog is 99%.

Group of orthologs #568. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.knowlesi:172

F6T6N4              	100.00%		B3L4V5              	100.00%
F6T724              	100.00%		B3L4V4              	100.00%
F6WXG6              	100.00%		B3L4V3              	100.00%
F6T6J2              	42.99%		
F6T6I0              	38.32%		
Bootstrap support for F6T6N4 as seed ortholog is 100%.
Bootstrap support for F6T724 as seed ortholog is 100%.
Bootstrap support for F6WXG6 as seed ortholog is 100%.
Bootstrap support for B3L4V5 as seed ortholog is 100%.
Bootstrap support for B3L4V4 as seed ortholog is 100%.
Bootstrap support for B3L4V3 as seed ortholog is 100%.

Group of orthologs #569. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.knowlesi:171

F6WW36              	100.00%		B3L2P6              	100.00%
H2XRG7              	13.73%		
Bootstrap support for F6WW36 as seed ortholog is 84%.
Bootstrap support for B3L2P6 as seed ortholog is 100%.

Group of orthologs #570. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:97

F6VCD8              	100.00%		B3L695              	100.00%
F6SGH3              	17.67%		
Bootstrap support for F6VCD8 as seed ortholog is 99%.
Bootstrap support for B3L695 as seed ortholog is 99%.

Group of orthologs #571. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.knowlesi:171

F6UQ99              	100.00%		B3L362              	100.00%
Bootstrap support for F6UQ99 as seed ortholog is 100%.
Bootstrap support for B3L362 as seed ortholog is 100%.

Group of orthologs #572. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.knowlesi:171

F6VT08              	100.00%		B3L549              	100.00%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for B3L549 as seed ortholog is 100%.

Group of orthologs #573. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.knowlesi:171

F7AEP2              	100.00%		B3L1K9              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for B3L1K9 as seed ortholog is 100%.

Group of orthologs #574. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.knowlesi:171

F7ASK1              	100.00%		B3L8A6              	100.00%
Bootstrap support for F7ASK1 as seed ortholog is 100%.
Bootstrap support for B3L8A6 as seed ortholog is 100%.

Group of orthologs #575. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.knowlesi:170

F6PPH5              	100.00%		B3L8M3              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 100%.
Bootstrap support for B3L8M3 as seed ortholog is 100%.

Group of orthologs #576. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.knowlesi:88

F6SDE2              	100.00%		B3L5C8              	100.00%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for B3L5C8 as seed ortholog is 75%.

Group of orthologs #577. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:170

F6X5U2              	100.00%		B3L376              	100.00%
Bootstrap support for F6X5U2 as seed ortholog is 99%.
Bootstrap support for B3L376 as seed ortholog is 100%.

Group of orthologs #578. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:96

H2XZG7              	100.00%		B3L9Q0              	100.00%
Bootstrap support for H2XZG7 as seed ortholog is 99%.
Bootstrap support for B3L9Q0 as seed ortholog is 99%.

Group of orthologs #579. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.knowlesi:170

H2Y1D7              	100.00%		B3L9G8              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for B3L9G8 as seed ortholog is 100%.

Group of orthologs #580. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:119

F6UHS2              	100.00%		B3KZF9              	100.00%
Bootstrap support for F6UHS2 as seed ortholog is 99%.
Bootstrap support for B3KZF9 as seed ortholog is 100%.

Group of orthologs #581. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.knowlesi:169

F6VTZ3              	100.00%		B3L645              	100.00%
Bootstrap support for F6VTZ3 as seed ortholog is 100%.
Bootstrap support for B3L645 as seed ortholog is 100%.

Group of orthologs #582. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.knowlesi:168

F6Q7D4              	100.00%		B3KZ41              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for B3KZ41 as seed ortholog is 100%.

Group of orthologs #583. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.knowlesi:168

F6S902              	100.00%		B3L8M1              	100.00%
Bootstrap support for F6S902 as seed ortholog is 100%.
Bootstrap support for B3L8M1 as seed ortholog is 100%.

Group of orthologs #584. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.knowlesi:168

F6ZTX9              	100.00%		B3L242              	100.00%
Bootstrap support for F6ZTX9 as seed ortholog is 100%.
Bootstrap support for B3L242 as seed ortholog is 100%.

Group of orthologs #585. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.knowlesi:167

F7AI93              	100.00%		B3LA40              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for B3LA40 as seed ortholog is 100%.

Group of orthologs #586. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.knowlesi:166

F6UA65              	100.00%		B3LA23              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for B3LA23 as seed ortholog is 100%.

Group of orthologs #587. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.knowlesi:166

F6ZGD4              	100.00%		B3LBQ9              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for B3LBQ9 as seed ortholog is 100%.

Group of orthologs #588. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:165

F6YRX9              	100.00%		B3L1N7              	100.00%
F6TK16              	12.24%		
Bootstrap support for F6YRX9 as seed ortholog is 99%.
Bootstrap support for B3L1N7 as seed ortholog is 100%.

Group of orthologs #589. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.knowlesi:165

F6UJM5              	100.00%		B3L2N5              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for B3L2N5 as seed ortholog is 100%.

Group of orthologs #590. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.knowlesi:164

F6SK91              	100.00%		B3LDF8              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for B3LDF8 as seed ortholog is 100%.

Group of orthologs #591. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:115

F6ZP71              	100.00%		B3L3A0              	100.00%
Bootstrap support for F6ZP71 as seed ortholog is 95%.
Bootstrap support for B3L3A0 as seed ortholog is 99%.

Group of orthologs #592. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.knowlesi:164

F6ZP25              	100.00%		B3L5A7              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for B3L5A7 as seed ortholog is 100%.

Group of orthologs #593. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.knowlesi:163

F6UJD6              	100.00%		B3KZT0              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for B3KZT0 as seed ortholog is 100%.

Group of orthologs #594. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.knowlesi:163

F6PXA9              	100.00%		B3LAD6              	100.00%
Bootstrap support for F6PXA9 as seed ortholog is 100%.
Bootstrap support for B3LAD6 as seed ortholog is 100%.

Group of orthologs #595. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.knowlesi:163

F6SID0              	100.00%		B3L5Y1              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for B3L5Y1 as seed ortholog is 100%.

Group of orthologs #596. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.knowlesi:163

H2Y3L9              	100.00%		B3L543              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for B3L543 as seed ortholog is 100%.

Group of orthologs #597. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.knowlesi:162

F6VM60              	100.00%		B3L325              	100.00%
H2XLN0              	11.51%		
Bootstrap support for F6VM60 as seed ortholog is 100%.
Bootstrap support for B3L325 as seed ortholog is 100%.

Group of orthologs #598. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:162

F7AEF7              	100.00%		B3L0V4              	100.00%
F6TVX8              	5.23%		
Bootstrap support for F7AEF7 as seed ortholog is 91%.
Bootstrap support for B3L0V4 as seed ortholog is 100%.

Group of orthologs #599. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.knowlesi:162

F6PPI4              	100.00%		B3L3R4              	100.00%
Bootstrap support for F6PPI4 as seed ortholog is 100%.
Bootstrap support for B3L3R4 as seed ortholog is 100%.

Group of orthologs #600. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.knowlesi:162

F6SZY0              	100.00%		B3LC08              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for B3LC08 as seed ortholog is 100%.

Group of orthologs #601. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.knowlesi:162

F6X0F3              	100.00%		B3L4C4              	100.00%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for B3L4C4 as seed ortholog is 100%.

Group of orthologs #602. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.knowlesi:161

H2XSU1              	100.00%		B3L684              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for B3L684 as seed ortholog is 100%.

Group of orthologs #603. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.knowlesi:119

H2Y1Y8              	100.00%		B3L8R4              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 100%.

Group of orthologs #604. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.knowlesi:117

Q67EQ6              	100.00%		B3L9X9              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for B3L9X9 as seed ortholog is 99%.

Group of orthologs #605. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.knowlesi:160

F6QE62              	100.00%		B3KZ34              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for B3KZ34 as seed ortholog is 100%.

Group of orthologs #606. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.knowlesi:160

F6YI25              	100.00%		B3KZQ9              	100.00%
Bootstrap support for F6YI25 as seed ortholog is 100%.
Bootstrap support for B3KZQ9 as seed ortholog is 100%.

Group of orthologs #607. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.knowlesi:160

F6WAW7              	100.00%		B3L4R3              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for B3L4R3 as seed ortholog is 100%.

Group of orthologs #608. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.knowlesi:160

F6ZIP8              	100.00%		B3L5K2              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for B3L5K2 as seed ortholog is 100%.

Group of orthologs #609. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.knowlesi:160

F6ZYJ2              	100.00%		B3LA41              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for B3LA41 as seed ortholog is 100%.

Group of orthologs #610. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.knowlesi:63

H2XME3              	100.00%		B3LDF0              	100.00%
Bootstrap support for H2XME3 as seed ortholog is 99%.
Bootstrap support for B3LDF0 as seed ortholog is 99%.

Group of orthologs #611. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.knowlesi:159

F6TL19              	100.00%		B3L2I9              	100.00%
Bootstrap support for F6TL19 as seed ortholog is 100%.
Bootstrap support for B3L2I9 as seed ortholog is 100%.

Group of orthologs #612. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.knowlesi:159

F7B3M4              	100.00%		B3L782              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for B3L782 as seed ortholog is 100%.

Group of orthologs #613. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.knowlesi:58

H2XL64              	100.00%		B3L610              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for B3L610 as seed ortholog is 98%.

Group of orthologs #614. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 P.knowlesi:158

H2XQD5              	100.00%		B3LAK3              	100.00%
H2XVK2              	76.98%		
Bootstrap support for H2XQD5 as seed ortholog is 60%.
Alternative seed ortholog is F6Y4G4 (3 bits away from this cluster)
Bootstrap support for B3LAK3 as seed ortholog is 100%.

Group of orthologs #615. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.knowlesi:158

F6UUL4              	100.00%		B3L341              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for B3L341 as seed ortholog is 100%.

Group of orthologs #616. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.knowlesi:158

F6VP14              	100.00%		B3LC15              	100.00%
Bootstrap support for F6VP14 as seed ortholog is 100%.
Bootstrap support for B3LC15 as seed ortholog is 100%.

Group of orthologs #617. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.knowlesi:158

F6Y0T9              	100.00%		B3LD01              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for B3LD01 as seed ortholog is 100%.

Group of orthologs #618. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.knowlesi:158

F6Z998              	100.00%		B3LD68              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for B3LD68 as seed ortholog is 100%.

Group of orthologs #619. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.knowlesi:158

F7BIC8              	100.00%		B3LDC6              	100.00%
Bootstrap support for F7BIC8 as seed ortholog is 89%.
Bootstrap support for B3LDC6 as seed ortholog is 100%.

Group of orthologs #620. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.knowlesi:158

H2Y323              	100.00%		B3L124              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 100%.
Bootstrap support for B3L124 as seed ortholog is 100%.

Group of orthologs #621. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.knowlesi:157

F7AIP5              	100.00%		B3L3I6              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for B3L3I6 as seed ortholog is 100%.

Group of orthologs #622. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:112

Q2PEE1              	100.00%		B3LCD2              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for B3LCD2 as seed ortholog is 100%.

Group of orthologs #623. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.knowlesi:156

F6V580              	100.00%		B3L1E5              	100.00%
Bootstrap support for F6V580 as seed ortholog is 100%.
Bootstrap support for B3L1E5 as seed ortholog is 100%.

Group of orthologs #624. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.knowlesi:64

H2XUL1              	100.00%		B3LAP9              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 100%.
Bootstrap support for B3LAP9 as seed ortholog is 43%.
Alternative seed ortholog is B3L148 (64 bits away from this cluster)

Group of orthologs #625. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.knowlesi:156

Q967X2              	100.00%		B3L4I9              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for B3L4I9 as seed ortholog is 100%.

Group of orthologs #626. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.knowlesi:155

F6UAZ6              	100.00%		B3L7R2              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for B3L7R2 as seed ortholog is 100%.

Group of orthologs #627. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.knowlesi:155

F6ZQX9              	100.00%		B3L8I6              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for B3L8I6 as seed ortholog is 100%.

Group of orthologs #628. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.knowlesi:155

H2XP26              	100.00%		B3L9M4              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for B3L9M4 as seed ortholog is 100%.

Group of orthologs #629. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.knowlesi:155

H2Y2K2              	100.00%		B3L023              	100.00%
Bootstrap support for H2Y2K2 as seed ortholog is 100%.
Bootstrap support for B3L023 as seed ortholog is 100%.

Group of orthologs #630. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.knowlesi:154

F6PJM3              	100.00%		B3KZU0              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 100%.
Bootstrap support for B3KZU0 as seed ortholog is 100%.

Group of orthologs #631. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.knowlesi:154

F6Q7P2              	100.00%		B3LC44              	100.00%
Bootstrap support for F6Q7P2 as seed ortholog is 99%.
Bootstrap support for B3LC44 as seed ortholog is 100%.

Group of orthologs #632. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.knowlesi:9

F6WV80              	100.00%		B3LCS3              	100.00%
Bootstrap support for F6WV80 as seed ortholog is 100%.
Bootstrap support for B3LCS3 as seed ortholog is 74%.
Alternative seed ortholog is B3L1H1 (9 bits away from this cluster)

Group of orthologs #633. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:154

F6XX66              	100.00%		B3LBK8              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 98%.
Bootstrap support for B3LBK8 as seed ortholog is 100%.

Group of orthologs #634. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.knowlesi:153

F6W1X7              	100.00%		B3L745              	100.00%
F6Z9B3              	13.79%		
Bootstrap support for F6W1X7 as seed ortholog is 100%.
Bootstrap support for B3L745 as seed ortholog is 100%.

Group of orthologs #635. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.knowlesi:153

F6YX67              	100.00%		B3L1D6              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for B3L1D6 as seed ortholog is 100%.

Group of orthologs #636. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.knowlesi:153

F6U8U5              	100.00%		B3LCK5              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 100%.
Bootstrap support for B3LCK5 as seed ortholog is 100%.

Group of orthologs #637. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.knowlesi:153

F7A4X2              	100.00%		B3LCI8              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for B3LCI8 as seed ortholog is 100%.

Group of orthologs #638. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.knowlesi:51

H2XP13              	100.00%		B3LAK7              	100.00%
Bootstrap support for H2XP13 as seed ortholog is 87%.
Bootstrap support for B3LAK7 as seed ortholog is 99%.

Group of orthologs #639. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.knowlesi:152

F6URQ9              	100.00%		B3L7H3              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for B3L7H3 as seed ortholog is 100%.

Group of orthologs #640. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.knowlesi:152

F6SP32              	100.00%		B3LCQ7              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for B3LCQ7 as seed ortholog is 100%.

Group of orthologs #641. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.knowlesi:152

F7A1S8              	100.00%		B3L6W7              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for B3L6W7 as seed ortholog is 100%.

Group of orthologs #642. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.knowlesi:152

H2XW54              	100.00%		B3LB59              	100.00%
Bootstrap support for H2XW54 as seed ortholog is 100%.
Bootstrap support for B3LB59 as seed ortholog is 100%.

Group of orthologs #643. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.knowlesi:151

F6R7I5              	100.00%		B3L826              	100.00%
Bootstrap support for F6R7I5 as seed ortholog is 100%.
Bootstrap support for B3L826 as seed ortholog is 100%.

Group of orthologs #644. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.knowlesi:151

F6YB21              	100.00%		B3L4F6              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for B3L4F6 as seed ortholog is 100%.

Group of orthologs #645. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.knowlesi:151

H2XVD0              	100.00%		B3L7Z1              	100.00%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for B3L7Z1 as seed ortholog is 100%.

Group of orthologs #646. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.knowlesi:150

F6SGU7              	100.00%		B3L2V1              	100.00%
H2Y279              	16.37%		
Bootstrap support for F6SGU7 as seed ortholog is 100%.
Bootstrap support for B3L2V1 as seed ortholog is 100%.

Group of orthologs #647. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.knowlesi:150

F6Z235              	100.00%		B3L470              	100.00%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for B3L470 as seed ortholog is 100%.

Group of orthologs #648. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:149

F6XPL3              	100.00%		B3L5S0              	100.00%
F7B875              	40.02%		
F7AAZ2              	23.76%		
F6WQV1              	8.75%		
F6TB77              	8.66%		
H2XNC3              	7.60%		
F6Z987              	5.12%		
Bootstrap support for F6XPL3 as seed ortholog is 94%.
Bootstrap support for B3L5S0 as seed ortholog is 100%.

Group of orthologs #649. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.knowlesi:149

F6V6S8              	100.00%		B3LC58              	100.00%
                    	       		B3L7H4              	22.78%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for B3LC58 as seed ortholog is 100%.

Group of orthologs #650. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.knowlesi:149

H2XPW5              	100.00%		B3L8X2              	100.00%
F6Z5V2              	9.53%		
Bootstrap support for H2XPW5 as seed ortholog is 86%.
Bootstrap support for B3L8X2 as seed ortholog is 100%.

Group of orthologs #651. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.knowlesi:44

F6WUF6              	100.00%		B3L3J7              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for B3L3J7 as seed ortholog is 95%.

Group of orthologs #652. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.knowlesi:149

F6U8F3              	100.00%		B3LA44              	100.00%
Bootstrap support for F6U8F3 as seed ortholog is 100%.
Bootstrap support for B3LA44 as seed ortholog is 100%.

Group of orthologs #653. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.knowlesi:149

F6YSX7              	100.00%		B3L5N8              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for B3L5N8 as seed ortholog is 100%.

Group of orthologs #654. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.knowlesi:50

F6WUA7              	100.00%		B3LBA2              	100.00%
Bootstrap support for F6WUA7 as seed ortholog is 100%.
Bootstrap support for B3LBA2 as seed ortholog is 94%.

Group of orthologs #655. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:149

H2XQ34              	100.00%		B3L6H9              	100.00%
Bootstrap support for H2XQ34 as seed ortholog is 99%.
Bootstrap support for B3L6H9 as seed ortholog is 100%.

Group of orthologs #656. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:149

Q8T888              	100.00%		B3L166              	100.00%
Bootstrap support for Q8T888 as seed ortholog is 99%.
Bootstrap support for B3L166 as seed ortholog is 100%.

Group of orthologs #657. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.knowlesi:148

F6TC27              	100.00%		B3LAG9              	100.00%
F6Q0G0              	18.85%		
Bootstrap support for F6TC27 as seed ortholog is 100%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #658. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.knowlesi:148

F6YHC8              	100.00%		B3KZL3              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for B3KZL3 as seed ortholog is 100%.

Group of orthologs #659. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.knowlesi:148

F6X0R0              	100.00%		B3L6S2              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 99%.
Bootstrap support for B3L6S2 as seed ortholog is 100%.

Group of orthologs #660. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:147

F6XLK3              	100.00%		B3L8Y6              	100.00%
                    	       		B3L8Y3              	26.79%
                    	       		B3L7M3              	22.57%
Bootstrap support for F6XLK3 as seed ortholog is 89%.
Bootstrap support for B3L8Y6 as seed ortholog is 100%.

Group of orthologs #661. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 P.knowlesi:147

F6R0P0              	100.00%		B3L3G6              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #662. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.knowlesi:147

F6YLC1              	100.00%		B3L3G4              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 99%.
Bootstrap support for B3L3G4 as seed ortholog is 100%.

Group of orthologs #663. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 P.knowlesi:147

H2Y197              	100.00%		B3L948              	100.00%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for B3L948 as seed ortholog is 100%.

Group of orthologs #664. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.knowlesi:146

F6Y6W3              	100.00%		B3L032              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for B3L032 as seed ortholog is 100%.

Group of orthologs #665. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.knowlesi:146

F6U3F2              	100.00%		B3LCN8              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for B3LCN8 as seed ortholog is 100%.

Group of orthologs #666. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.knowlesi:79

F6Z241              	100.00%		B3LD56              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 99%.
Bootstrap support for B3LD56 as seed ortholog is 99%.

Group of orthologs #667. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:84

H2XNZ7              	100.00%		B3L418              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 98%.
Bootstrap support for B3L418 as seed ortholog is 99%.

Group of orthologs #668. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.knowlesi:146

H2XXR8              	100.00%		B3L181              	100.00%
Bootstrap support for H2XXR8 as seed ortholog is 100%.
Bootstrap support for B3L181 as seed ortholog is 100%.

Group of orthologs #669. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.knowlesi:145

F7ABS5              	100.00%		B3L366              	100.00%
Bootstrap support for F7ABS5 as seed ortholog is 100%.
Bootstrap support for B3L366 as seed ortholog is 100%.

Group of orthologs #670. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.knowlesi:145

F7A429              	100.00%		B3L7U8              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for B3L7U8 as seed ortholog is 100%.

Group of orthologs #671. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.knowlesi:144

F6SYV7              	100.00%		B3L1J7              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for B3L1J7 as seed ortholog is 100%.

Group of orthologs #672. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.knowlesi:144

F6TST6              	100.00%		B3L0C6              	100.00%
Bootstrap support for F6TST6 as seed ortholog is 100%.
Bootstrap support for B3L0C6 as seed ortholog is 100%.

Group of orthologs #673. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.knowlesi:144

F6VYC6              	100.00%		B3KZ67              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for B3KZ67 as seed ortholog is 100%.

Group of orthologs #674. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.knowlesi:144

F6Z8S6              	100.00%		B3L9P0              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 87%.
Bootstrap support for B3L9P0 as seed ortholog is 100%.

Group of orthologs #675. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.knowlesi:28

F6YD02              	100.00%		B3KZA0              	100.00%
Bootstrap support for F6YD02 as seed ortholog is 99%.
Bootstrap support for B3KZA0 as seed ortholog is 78%.

Group of orthologs #676. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.knowlesi:142

F6REI3              	100.00%		B3L136              	100.00%
Bootstrap support for F6REI3 as seed ortholog is 100%.
Bootstrap support for B3L136 as seed ortholog is 100%.

Group of orthologs #677. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.knowlesi:142

F6WH15              	100.00%		B3L671              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for B3L671 as seed ortholog is 100%.

Group of orthologs #678. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.knowlesi:142

F6XPZ4              	100.00%		B3L6K8              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 99%.
Bootstrap support for B3L6K8 as seed ortholog is 100%.

Group of orthologs #679. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.knowlesi:142

F6YI57              	100.00%		B3L5Y6              	100.00%
Bootstrap support for F6YI57 as seed ortholog is 100%.
Bootstrap support for B3L5Y6 as seed ortholog is 100%.

Group of orthologs #680. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.knowlesi:142

F7AJZ2              	100.00%		B3LBI7              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for B3LBI7 as seed ortholog is 100%.

Group of orthologs #681. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.knowlesi:141

F6UQL0              	100.00%		B3L2Y1              	100.00%
Bootstrap support for F6UQL0 as seed ortholog is 100%.
Bootstrap support for B3L2Y1 as seed ortholog is 100%.

Group of orthologs #682. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:140

F6S855              	100.00%		B3L7E6              	100.00%
F6XUY3              	66.46%		
F6S880              	66.04%		
F6W3Q9              	45.70%		
F7BGH4              	11.11%		
F6UJQ6              	10.69%		
H2XY22              	9.01%		
Bootstrap support for F6S855 as seed ortholog is 91%.
Bootstrap support for B3L7E6 as seed ortholog is 100%.

Group of orthologs #683. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 P.knowlesi:140

H2XMQ5              	100.00%		B3KZI4              	100.00%
F6S6I4              	21.73%		
F6SPL5              	7.48%		
Bootstrap support for H2XMQ5 as seed ortholog is 100%.
Bootstrap support for B3KZI4 as seed ortholog is 100%.

Group of orthologs #684. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 P.knowlesi:140

F6Q521              	100.00%		B3L444              	100.00%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for B3L444 as seed ortholog is 100%.

Group of orthologs #685. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 P.knowlesi:140

F6QCQ5              	100.00%		B3LBG9              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for B3LBG9 as seed ortholog is 100%.

Group of orthologs #686. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.knowlesi:139

F6QAQ0              	100.00%		B3L9Z2              	100.00%
Bootstrap support for F6QAQ0 as seed ortholog is 100%.
Bootstrap support for B3L9Z2 as seed ortholog is 100%.

Group of orthologs #687. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.knowlesi:139

F6T0L9              	100.00%		B3L926              	100.00%
Bootstrap support for F6T0L9 as seed ortholog is 100%.
Bootstrap support for B3L926 as seed ortholog is 100%.

Group of orthologs #688. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:139

F6TKH9              	100.00%		B3LAB5              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 99%.
Bootstrap support for B3LAB5 as seed ortholog is 100%.

Group of orthologs #689. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.knowlesi:139

F6XWN6              	100.00%		B3LDF1              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for B3LDF1 as seed ortholog is 100%.

Group of orthologs #690. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.knowlesi:139

F6YR71              	100.00%		B3LDB6              	100.00%
Bootstrap support for F6YR71 as seed ortholog is 98%.
Bootstrap support for B3LDB6 as seed ortholog is 100%.

Group of orthologs #691. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.knowlesi:139

Q4H2I7              	100.00%		B3L3N3              	100.00%
Bootstrap support for Q4H2I7 as seed ortholog is 100%.
Bootstrap support for B3L3N3 as seed ortholog is 100%.

Group of orthologs #692. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:56

H2XY34              	100.00%		B3L1Y3              	100.00%
F6X9C7              	34.82%		
H2XPK9              	27.32%		
F6Y7T8              	16.96%		
Bootstrap support for H2XY34 as seed ortholog is 94%.
Bootstrap support for B3L1Y3 as seed ortholog is 98%.

Group of orthologs #693. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.knowlesi:94

F6UNA3              	100.00%		B3L085              	100.00%
F6QH95              	42.40%		
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for B3L085 as seed ortholog is 99%.

Group of orthologs #694. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.knowlesi:74

F6QMU4              	100.00%		B3LCN2              	100.00%
F6R2J6              	9.21%		
Bootstrap support for F6QMU4 as seed ortholog is 98%.
Bootstrap support for B3LCN2 as seed ortholog is 98%.

Group of orthologs #695. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.knowlesi:138

F6PP61              	100.00%		B3KZA9              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for B3KZA9 as seed ortholog is 100%.

Group of orthologs #696. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.knowlesi:138

F6SU13              	100.00%		B3L349              	100.00%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for B3L349 as seed ortholog is 100%.

Group of orthologs #697. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.knowlesi:138

F6XXF0              	100.00%		B3L4X8              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for B3L4X8 as seed ortholog is 100%.

Group of orthologs #698. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.knowlesi:137

F6UK51              	100.00%		B3L6U9              	100.00%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for B3L6U9 as seed ortholog is 100%.

Group of orthologs #699. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.knowlesi:137

F6XCG6              	100.00%		B3L747              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for B3L747 as seed ortholog is 100%.

Group of orthologs #700. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

F6ZZP5              	100.00%		B3L2K7              	100.00%
F7B8I8              	17.34%		
Bootstrap support for F6ZZP5 as seed ortholog is 100%.
Bootstrap support for B3L2K7 as seed ortholog is 100%.

Group of orthologs #701. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

H2XQU6              	100.00%		B3LAX1              	100.00%
H2XPH8              	20.69%		
Bootstrap support for H2XQU6 as seed ortholog is 100%.
Bootstrap support for B3LAX1 as seed ortholog is 100%.

Group of orthologs #702. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.knowlesi:51

Q1RPW1              	100.00%		B3L241              	100.00%
                    	       		B3L5X9              	12.00%
Bootstrap support for Q1RPW1 as seed ortholog is 97%.
Bootstrap support for B3L241 as seed ortholog is 88%.

Group of orthologs #703. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

F6QWW6              	100.00%		B3L6C0              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for B3L6C0 as seed ortholog is 100%.

Group of orthologs #704. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

F6QSC7              	100.00%		B3L9G0              	100.00%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for B3L9G0 as seed ortholog is 100%.

Group of orthologs #705. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

F6R4F4              	100.00%		B3LB24              	100.00%
Bootstrap support for F6R4F4 as seed ortholog is 100%.
Bootstrap support for B3LB24 as seed ortholog is 100%.

Group of orthologs #706. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.knowlesi:33

F6SFM0              	100.00%		B3L973              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 95%.
Bootstrap support for B3L973 as seed ortholog is 88%.

Group of orthologs #707. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

F6VGC6              	100.00%		B3L303              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for B3L303 as seed ortholog is 100%.

Group of orthologs #708. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

F6VUL9              	100.00%		B3LAY3              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for B3LAY3 as seed ortholog is 100%.

Group of orthologs #709. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.knowlesi:136

H2XS37              	100.00%		B3L6N7              	100.00%
Bootstrap support for H2XS37 as seed ortholog is 100%.
Bootstrap support for B3L6N7 as seed ortholog is 100%.

Group of orthologs #710. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 P.knowlesi:135

F6T485              	100.00%		B3KYX5              	100.00%
Bootstrap support for F6T485 as seed ortholog is 83%.
Bootstrap support for B3KYX5 as seed ortholog is 100%.

Group of orthologs #711. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.knowlesi:135

F6TQ69              	100.00%		B3KZ07              	100.00%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for B3KZ07 as seed ortholog is 100%.

Group of orthologs #712. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.knowlesi:135

F6UU89              	100.00%		B3L6M1              	100.00%
Bootstrap support for F6UU89 as seed ortholog is 100%.
Bootstrap support for B3L6M1 as seed ortholog is 100%.

Group of orthologs #713. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.knowlesi:90

F6YF45              	100.00%		B3L4M2              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 99%.
Bootstrap support for B3L4M2 as seed ortholog is 99%.

Group of orthologs #714. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.knowlesi:135

F7AMW5              	100.00%		B3L443              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for B3L443 as seed ortholog is 100%.

Group of orthologs #715. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

H2XZ54              	100.00%		B3L2P7              	100.00%
F6Y5Q3              	29.84%		
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for B3L2P7 as seed ortholog is 100%.

Group of orthologs #716. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6QQ08              	100.00%		B3L994              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for B3L994 as seed ortholog is 100%.

Group of orthologs #717. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6PWP3              	100.00%		B3LAX8              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for B3LAX8 as seed ortholog is 100%.

Group of orthologs #718. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6WM99              	100.00%		B3L236              	100.00%
Bootstrap support for F6WM99 as seed ortholog is 100%.
Bootstrap support for B3L236 as seed ortholog is 100%.

Group of orthologs #719. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6SVN8              	100.00%		B3LBG7              	100.00%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for B3LBG7 as seed ortholog is 100%.

Group of orthologs #720. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:134

F6Y8Y8              	100.00%		B3L324              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 99%.
Bootstrap support for B3L324 as seed ortholog is 100%.

Group of orthologs #721. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6YIY8              	100.00%		B3L4P4              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for B3L4P4 as seed ortholog is 100%.

Group of orthologs #722. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6VYZ5              	100.00%		B3LCB8              	100.00%
Bootstrap support for F6VYZ5 as seed ortholog is 100%.
Bootstrap support for B3LCB8 as seed ortholog is 100%.

Group of orthologs #723. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F7AG43              	100.00%		B3L319              	100.00%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for B3L319 as seed ortholog is 100%.

Group of orthologs #724. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.knowlesi:134

F6YU96              	100.00%		B3LAL4              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for B3LAL4 as seed ortholog is 100%.

Group of orthologs #725. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.knowlesi:133

F7AD70              	100.00%		B3L4L9              	100.00%
H2XQI0              	29.13%		
Bootstrap support for F7AD70 as seed ortholog is 82%.
Bootstrap support for B3L4L9 as seed ortholog is 100%.

Group of orthologs #726. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:133

F6RBT7              	100.00%		B3KZQ6              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for B3KZQ6 as seed ortholog is 100%.

Group of orthologs #727. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:27

F6S1K1              	100.00%		B3LCN5              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for B3LCN5 as seed ortholog is 79%.

Group of orthologs #728. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:133

F6Z897              	100.00%		B3L1V2              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for B3L1V2 as seed ortholog is 100%.

Group of orthologs #729. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:133

F6YL86              	100.00%		B3L7L2              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for B3L7L2 as seed ortholog is 100%.

Group of orthologs #730. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:41

F7BDK3              	100.00%		B3L238              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for B3L238 as seed ortholog is 91%.

Group of orthologs #731. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.knowlesi:133

H2XT24              	100.00%		B3L947              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 94%.
Bootstrap support for B3L947 as seed ortholog is 100%.

Group of orthologs #732. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.knowlesi:133

H2Y1I7              	100.00%		B3LCV4              	100.00%
Bootstrap support for H2Y1I7 as seed ortholog is 100%.
Bootstrap support for B3LCV4 as seed ortholog is 100%.

Group of orthologs #733. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.knowlesi:132

H2XX55              	100.00%		B3L1F3              	100.00%
Bootstrap support for H2XX55 as seed ortholog is 100%.
Bootstrap support for B3L1F3 as seed ortholog is 100%.

Group of orthologs #734. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.knowlesi:131

F6SDU1              	100.00%		B3L474              	100.00%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for B3L474 as seed ortholog is 100%.

Group of orthologs #735. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:65

F6W1C5              	100.00%		B3KZB4              	100.00%
Bootstrap support for F6W1C5 as seed ortholog is 99%.
Bootstrap support for B3KZB4 as seed ortholog is 98%.

Group of orthologs #736. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.knowlesi:131

F6TUR1              	100.00%		B3L5F0              	100.00%
Bootstrap support for F6TUR1 as seed ortholog is 95%.
Bootstrap support for B3L5F0 as seed ortholog is 100%.

Group of orthologs #737. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.knowlesi:131

F7APT3              	100.00%		B3L0C4              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for B3L0C4 as seed ortholog is 100%.

Group of orthologs #738. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.knowlesi:131

F6X4T0              	100.00%		B3LBI9              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for B3LBI9 as seed ortholog is 100%.

Group of orthologs #739. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.knowlesi:130

H2XNI2              	100.00%		B3L4T2              	100.00%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for B3L4T2 as seed ortholog is 100%.

Group of orthologs #740. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.knowlesi:129

H2XW88              	100.00%		B3L1D1              	100.00%
F7AX27              	14.50%		
Bootstrap support for H2XW88 as seed ortholog is 100%.
Bootstrap support for B3L1D1 as seed ortholog is 100%.

Group of orthologs #741. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.knowlesi:72

F6QDG1              	100.00%		B3LD79              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for B3LD79 as seed ortholog is 95%.

Group of orthologs #742. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.knowlesi:129

F6RE18              	100.00%		B3LBS5              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for B3LBS5 as seed ortholog is 100%.

Group of orthologs #743. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.knowlesi:129

F6VEG5              	100.00%		B3L7Y6              	100.00%
Bootstrap support for F6VEG5 as seed ortholog is 100%.
Bootstrap support for B3L7Y6 as seed ortholog is 100%.

Group of orthologs #744. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.knowlesi:129

F6YQB2              	100.00%		B3L687              	100.00%
Bootstrap support for F6YQB2 as seed ortholog is 100%.
Bootstrap support for B3L687 as seed ortholog is 100%.

Group of orthologs #745. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.knowlesi:34

F7BD35              	100.00%		B3LAZ0              	100.00%
Bootstrap support for F7BD35 as seed ortholog is 91%.
Bootstrap support for B3LAZ0 as seed ortholog is 76%.

Group of orthologs #746. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.knowlesi:129

H2XS91              	100.00%		B3LBT5              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for B3LBT5 as seed ortholog is 100%.

Group of orthologs #747. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

I6L237              	100.00%		B3L5P4              	100.00%
F6RCC2              	95.45%		
Bootstrap support for I6L237 as seed ortholog is 100%.
Bootstrap support for B3L5P4 as seed ortholog is 100%.

Group of orthologs #748. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

F6RAN6              	100.00%		B3L176              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for B3L176 as seed ortholog is 100%.

Group of orthologs #749. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

F6S2C6              	100.00%		B3L901              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for B3L901 as seed ortholog is 100%.

Group of orthologs #750. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

F6V6R4              	100.00%		B3L544              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for B3L544 as seed ortholog is 100%.

Group of orthologs #751. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

F6TRZ2              	100.00%		B3LC67              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for B3LC67 as seed ortholog is 100%.

Group of orthologs #752. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.knowlesi:128

F7AZT4              	100.00%		B3L4T4              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 75%.
Bootstrap support for B3L4T4 as seed ortholog is 100%.

Group of orthologs #753. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

F6Z7S0              	100.00%		B3LA15              	100.00%
Bootstrap support for F6Z7S0 as seed ortholog is 100%.
Bootstrap support for B3LA15 as seed ortholog is 100%.

Group of orthologs #754. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

H2XNC6              	100.00%		B3L0Z8              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for B3L0Z8 as seed ortholog is 100%.

Group of orthologs #755. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

F7B2Q1              	100.00%		B3L8R3              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for B3L8R3 as seed ortholog is 100%.

Group of orthologs #756. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

Q4H3E2              	100.00%		B3KZS5              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for B3KZS5 as seed ortholog is 100%.

Group of orthologs #757. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.knowlesi:128

H2XZL8              	100.00%		B3L560              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for B3L560 as seed ortholog is 100%.

Group of orthologs #758. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.knowlesi:127

F6Q9P1              	100.00%		B3KZG4              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for B3KZG4 as seed ortholog is 100%.

Group of orthologs #759. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:31

H2XQ42              	100.00%		B3L0J3              	100.00%
H2Y0K9              	9.17%		
Bootstrap support for H2XQ42 as seed ortholog is 95%.
Bootstrap support for B3L0J3 as seed ortholog is 78%.

Group of orthologs #760. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.knowlesi:126

F6QR08              	100.00%		B3LBM7              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for B3LBM7 as seed ortholog is 100%.

Group of orthologs #761. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.knowlesi:126

F6SNU1              	100.00%		B3LAD1              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for B3LAD1 as seed ortholog is 100%.

Group of orthologs #762. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.knowlesi:126

F7A1R5              	100.00%		B3L6Y7              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for B3L6Y7 as seed ortholog is 100%.

Group of orthologs #763. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.knowlesi:78

H2XW02              	100.00%		B3L0G8              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for B3L0G8 as seed ortholog is 99%.

Group of orthologs #764. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.knowlesi:126

H2Y2X7              	100.00%		B3L1L6              	100.00%
Bootstrap support for H2Y2X7 as seed ortholog is 100%.
Bootstrap support for B3L1L6 as seed ortholog is 100%.

Group of orthologs #765. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.knowlesi:29

H2XUK5              	100.00%		B3LA96              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 86%.
Bootstrap support for B3LA96 as seed ortholog is 67%.
Alternative seed ortholog is B3LAM7 (29 bits away from this cluster)

Group of orthologs #766. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.knowlesi:125

F6R180              	100.00%		B3L8P9              	100.00%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for B3L8P9 as seed ortholog is 100%.

Group of orthologs #767. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.knowlesi:125

F6YD53              	100.00%		B3L6X5              	100.00%
Bootstrap support for F6YD53 as seed ortholog is 100%.
Bootstrap support for B3L6X5 as seed ortholog is 100%.

Group of orthologs #768. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.knowlesi:125

F6ZMJ7              	100.00%		B3LBE7              	100.00%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for B3LBE7 as seed ortholog is 100%.

Group of orthologs #769. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:124

F6SHZ7              	100.00%		B3L692              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for B3L692 as seed ortholog is 100%.

Group of orthologs #770. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:124

F6UMM5              	100.00%		B3L267              	100.00%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for B3L267 as seed ortholog is 100%.

Group of orthologs #771. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:124

F7AZA1              	100.00%		B3KZI2              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for B3KZI2 as seed ortholog is 100%.

Group of orthologs #772. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:124

F6ZQ58              	100.00%		B3L4J9              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for B3L4J9 as seed ortholog is 100%.

Group of orthologs #773. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.knowlesi:124

F6ZGS5              	100.00%		B3L6U4              	100.00%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for B3L6U4 as seed ortholog is 100%.

Group of orthologs #774. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.knowlesi:123

F6S8X6              	100.00%		B3L174              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for B3L174 as seed ortholog is 100%.

Group of orthologs #775. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.knowlesi:123

C4B8X6              	100.00%		B3LCF2              	100.00%
Bootstrap support for C4B8X6 as seed ortholog is 100%.
Bootstrap support for B3LCF2 as seed ortholog is 100%.

Group of orthologs #776. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.knowlesi:123

F6S360              	100.00%		B3LD50              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for B3LD50 as seed ortholog is 100%.

Group of orthologs #777. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.knowlesi:123

H2XM23              	100.00%		B3L6A3              	100.00%
Bootstrap support for H2XM23 as seed ortholog is 100%.
Bootstrap support for B3L6A3 as seed ortholog is 100%.

Group of orthologs #778. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.knowlesi:123

H2XWF2              	100.00%		B3L8U3              	100.00%
Bootstrap support for H2XWF2 as seed ortholog is 82%.
Bootstrap support for B3L8U3 as seed ortholog is 100%.

Group of orthologs #779. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.knowlesi:122

F6SM21              	100.00%		B3L8G2              	100.00%
F6Q2J0              	26.75%		
F6YPX6              	22.11%		
F7AKC9              	22.11%		
H2XSR0              	17.93%		
F7BC57              	15.01%		
F6ZXE7              	14.56%		
F6XRF6              	12.65%		
H2XV00              	12.37%		
F7A5P0              	11.83%		
F6QJJ5              	10.56%		
F6Y221              	10.28%		
F6Y050              	9.83%		
F6ZYD9              	9.19%		
F6XX55              	9.19%		
H2Y1J9              	8.92%		
F7B7S4              	8.19%		
F6SR61              	7.73%		
F6U7S8              	7.28%		
F6QXU2              	6.73%		
F6WWQ0              	6.28%		
F6ZV29              	6.28%		
F6VLL9              	6.10%		
F6RA21              	6.01%		
F6YTZ8              	5.46%		
Bootstrap support for F6SM21 as seed ortholog is 100%.
Bootstrap support for B3L8G2 as seed ortholog is 100%.

Group of orthologs #780. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.knowlesi:122

F7AEF1              	100.00%		B3L5N7              	100.00%
Bootstrap support for F7AEF1 as seed ortholog is 100%.
Bootstrap support for B3L5N7 as seed ortholog is 100%.

Group of orthologs #781. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.knowlesi:122

H2XSZ1              	100.00%		B3L662              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 99%.
Bootstrap support for B3L662 as seed ortholog is 100%.

Group of orthologs #782. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

F6Q548              	100.00%		B3L3E4              	100.00%
Bootstrap support for F6Q548 as seed ortholog is 100%.
Bootstrap support for B3L3E4 as seed ortholog is 100%.

Group of orthologs #783. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:121

F6PP92              	100.00%		B3L9G7              	100.00%
Bootstrap support for F6PP92 as seed ortholog is 99%.
Bootstrap support for B3L9G7 as seed ortholog is 100%.

Group of orthologs #784. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

F6W7Q3              	100.00%		B3L6N2              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for B3L6N2 as seed ortholog is 100%.

Group of orthologs #785. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

F6YLQ9              	100.00%		B3L2R9              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for B3L2R9 as seed ortholog is 100%.

Group of orthologs #786. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

F6W170              	100.00%		B3LAV1              	100.00%
Bootstrap support for F6W170 as seed ortholog is 100%.
Bootstrap support for B3LAV1 as seed ortholog is 100%.

Group of orthologs #787. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 P.knowlesi:121

F6YMX2              	100.00%		B3L5I2              	100.00%
Bootstrap support for F6YMX2 as seed ortholog is 83%.
Bootstrap support for B3L5I2 as seed ortholog is 100%.

Group of orthologs #788. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

F6ZT62              	100.00%		B3L4N3              	100.00%
Bootstrap support for F6ZT62 as seed ortholog is 100%.
Bootstrap support for B3L4N3 as seed ortholog is 100%.

Group of orthologs #789. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

H2XPR5              	100.00%		B3L4N5              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for B3L4N5 as seed ortholog is 100%.

Group of orthologs #790. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.knowlesi:121

H2XWZ0              	100.00%		B3L358              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for B3L358 as seed ortholog is 100%.

Group of orthologs #791. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.knowlesi:121

H2XSI3              	100.00%		B3LCE1              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 89%.
Bootstrap support for B3LCE1 as seed ortholog is 100%.

Group of orthologs #792. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.knowlesi:120

F6ZRQ5              	100.00%		B3KZ86              	100.00%
Bootstrap support for F6ZRQ5 as seed ortholog is 100%.
Bootstrap support for B3KZ86 as seed ortholog is 100%.

Group of orthologs #793. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.knowlesi:120

F6VMC6              	100.00%		B3LBW0              	100.00%
Bootstrap support for F6VMC6 as seed ortholog is 100%.
Bootstrap support for B3LBW0 as seed ortholog is 100%.

Group of orthologs #794. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.knowlesi:120

F7BI62              	100.00%		B3L8W9              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for B3L8W9 as seed ortholog is 100%.

Group of orthologs #795. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.knowlesi:58

H2XTZ1              	100.00%		B3LAW9              	100.00%
Bootstrap support for H2XTZ1 as seed ortholog is 100%.
Bootstrap support for B3LAW9 as seed ortholog is 99%.

Group of orthologs #796. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:119

F6WVH2              	100.00%		B3L6V2              	100.00%
F6Q6W6              	67.19%		
F6WXF1              	15.25%		
Bootstrap support for F6WVH2 as seed ortholog is 100%.
Bootstrap support for B3L6V2 as seed ortholog is 100%.

Group of orthologs #797. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:119

F6Q4Z2              	100.00%		B3L937              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for B3L937 as seed ortholog is 100%.

Group of orthologs #798. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:119

F6SV73              	100.00%		B3L4Z4              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for B3L4Z4 as seed ortholog is 100%.

Group of orthologs #799. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:119

F7AMD9              	100.00%		B3L9L6              	100.00%
Bootstrap support for F7AMD9 as seed ortholog is 100%.
Bootstrap support for B3L9L6 as seed ortholog is 100%.

Group of orthologs #800. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.knowlesi:75

H2XQ56              	100.00%		B3L1V9              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for B3L1V9 as seed ortholog is 99%.

Group of orthologs #801. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

F6Z1D9              	100.00%		B3L387              	100.00%
F6V0W8              	6.85%		
Bootstrap support for F6Z1D9 as seed ortholog is 100%.
Bootstrap support for B3L387 as seed ortholog is 100%.

Group of orthologs #802. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

F6SAX8              	100.00%		B3L4C6              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for B3L4C6 as seed ortholog is 100%.

Group of orthologs #803. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

F6UCW1              	100.00%		B3L3R0              	100.00%
Bootstrap support for F6UCW1 as seed ortholog is 100%.
Bootstrap support for B3L3R0 as seed ortholog is 100%.

Group of orthologs #804. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

F6YXX9              	100.00%		B3L2D9              	100.00%
Bootstrap support for F6YXX9 as seed ortholog is 100%.
Bootstrap support for B3L2D9 as seed ortholog is 100%.

Group of orthologs #805. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

F7BK44              	100.00%		B3L087              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for B3L087 as seed ortholog is 100%.

Group of orthologs #806. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

F7ASB0              	100.00%		B3LDA8              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for B3LDA8 as seed ortholog is 100%.

Group of orthologs #807. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.knowlesi:118

H2XSX6              	100.00%		B3LBX3              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for B3LBX3 as seed ortholog is 100%.

Group of orthologs #808. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.knowlesi:117

F6QDX7              	100.00%		B3L7B0              	100.00%
Bootstrap support for F6QDX7 as seed ortholog is 100%.
Bootstrap support for B3L7B0 as seed ortholog is 100%.

Group of orthologs #809. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.knowlesi:117

F6WSV9              	100.00%		B3L258              	100.00%
Bootstrap support for F6WSV9 as seed ortholog is 83%.
Bootstrap support for B3L258 as seed ortholog is 100%.

Group of orthologs #810. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.knowlesi:117

F6VSM2              	100.00%		B3L551              	100.00%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for B3L551 as seed ortholog is 100%.

Group of orthologs #811. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.knowlesi:117

F6V7G7              	100.00%		B3LD77              	100.00%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for B3LD77 as seed ortholog is 100%.

Group of orthologs #812. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.knowlesi:117

F6Y3K6              	100.00%		B3L7Y3              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for B3L7Y3 as seed ortholog is 100%.

Group of orthologs #813. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.knowlesi:117

F7AMV0              	100.00%		B3L2X6              	100.00%
Bootstrap support for F7AMV0 as seed ortholog is 100%.
Bootstrap support for B3L2X6 as seed ortholog is 100%.

Group of orthologs #814. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6YSJ3              	100.00%		B3L7Z7              	100.00%
F6VL03              	40.22%		
Q5SE06              	21.76%		
F6S1J5              	20.66%		
F6XRM9              	11.21%		
Bootstrap support for F6YSJ3 as seed ortholog is 100%.
Bootstrap support for B3L7Z7 as seed ortholog is 100%.

Group of orthologs #815. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6QZW1              	100.00%		B3L4M3              	100.00%
F6XGK4              	26.79%		
F7BA12              	6.24%		
F7B1Z2              	6.06%		
Bootstrap support for F6QZW1 as seed ortholog is 100%.
Bootstrap support for B3L4M3 as seed ortholog is 100%.

Group of orthologs #816. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6TAV4              	100.00%		B3L0K0              	100.00%
Bootstrap support for F6TAV4 as seed ortholog is 100%.
Bootstrap support for B3L0K0 as seed ortholog is 100%.

Group of orthologs #817. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6PQL4              	100.00%		B3LB83              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for B3LB83 as seed ortholog is 100%.

Group of orthologs #818. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6VJL7              	100.00%		B3L9F7              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for B3L9F7 as seed ortholog is 100%.

Group of orthologs #819. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6X034              	100.00%		B3L796              	100.00%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for B3L796 as seed ortholog is 100%.

Group of orthologs #820. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6ZPU3              	100.00%		B3LBB5              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for B3LBB5 as seed ortholog is 100%.

Group of orthologs #821. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.knowlesi:116

F6ZV18              	100.00%		B3LBD6              	100.00%
Bootstrap support for F6ZV18 as seed ortholog is 100%.
Bootstrap support for B3LBD6 as seed ortholog is 100%.

Group of orthologs #822. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.knowlesi:115

F6U899              	100.00%		B3L7D2              	100.00%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for B3L7D2 as seed ortholog is 100%.

Group of orthologs #823. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.knowlesi:115

F7ATN8              	100.00%		B3L1M2              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 100%.
Bootstrap support for B3L1M2 as seed ortholog is 100%.

Group of orthologs #824. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.knowlesi:115

H2Y0Q6              	100.00%		B3L1F0              	100.00%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for B3L1F0 as seed ortholog is 100%.

Group of orthologs #825. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:114

F6SJY8              	100.00%		B3L608              	100.00%
F6VZA9              	100.00%		
Bootstrap support for F6SJY8 as seed ortholog is 100%.
Bootstrap support for F6VZA9 as seed ortholog is 100%.
Bootstrap support for B3L608 as seed ortholog is 100%.

Group of orthologs #826. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 P.knowlesi:23

F6PLY6              	100.00%		B3L8J4              	100.00%
Bootstrap support for F6PLY6 as seed ortholog is 84%.
Bootstrap support for B3L8J4 as seed ortholog is 74%.
Alternative seed ortholog is B3L6X6 (23 bits away from this cluster)

Group of orthologs #827. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:114

F6WPY5              	100.00%		B3L7P4              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for B3L7P4 as seed ortholog is 100%.

Group of orthologs #828. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.knowlesi:114

F7APY2              	100.00%		B3L0H5              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for B3L0H5 as seed ortholog is 100%.

Group of orthologs #829. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.knowlesi:54

F6RD78              	100.00%		B3KZ61              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 100%.
Bootstrap support for B3KZ61 as seed ortholog is 84%.

Group of orthologs #830. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.knowlesi:113

F6U3H2              	100.00%		B3L8T1              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 100%.
Bootstrap support for B3L8T1 as seed ortholog is 100%.

Group of orthologs #831. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.knowlesi:113

F6UMH6              	100.00%		B3L7V6              	100.00%
Bootstrap support for F6UMH6 as seed ortholog is 81%.
Bootstrap support for B3L7V6 as seed ortholog is 100%.

Group of orthologs #832. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.knowlesi:57

F6XDJ2              	100.00%		B3L6T2              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 72%.
Alternative seed ortholog is F7API1 (31 bits away from this cluster)
Bootstrap support for B3L6T2 as seed ortholog is 91%.

Group of orthologs #833. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.knowlesi:113

F6VCT2              	100.00%		B3LDD9              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for B3LDD9 as seed ortholog is 100%.

Group of orthologs #834. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.knowlesi:113

F6X9U7              	100.00%		B3LBC8              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for B3LBC8 as seed ortholog is 100%.

Group of orthologs #835. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.knowlesi:112

F6QS20              	100.00%		B3KZ68              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for B3KZ68 as seed ortholog is 100%.

Group of orthologs #836. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.knowlesi:112

F6XTV8              	100.00%		B3LC41              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for B3LC41 as seed ortholog is 100%.

Group of orthologs #837. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.knowlesi:112

F7A9Q6              	100.00%		B3LAB4              	100.00%
Bootstrap support for F7A9Q6 as seed ortholog is 100%.
Bootstrap support for B3LAB4 as seed ortholog is 100%.

Group of orthologs #838. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.knowlesi:112

H2XUW4              	100.00%		B3L2A7              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 80%.
Bootstrap support for B3L2A7 as seed ortholog is 100%.

Group of orthologs #839. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.knowlesi:112

H2XVJ2              	100.00%		B3L4G7              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for B3L4G7 as seed ortholog is 100%.

Group of orthologs #840. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.knowlesi:112

H2XY06              	100.00%		B3LCU0              	100.00%
Bootstrap support for H2XY06 as seed ortholog is 100%.
Bootstrap support for B3LCU0 as seed ortholog is 100%.

Group of orthologs #841. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.knowlesi:22

F6TCF8              	100.00%		B3L8Y8              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for B3L8Y8 as seed ortholog is 80%.

Group of orthologs #842. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.knowlesi:111

H2XKA1              	100.00%		B3L891              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for B3L891 as seed ortholog is 100%.

Group of orthologs #843. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:110

F6PHR7              	100.00%		B3KZ77              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for B3KZ77 as seed ortholog is 100%.

Group of orthologs #844. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:110

F6X4A0              	100.00%		B3L050              	100.00%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for B3L050 as seed ortholog is 100%.

Group of orthologs #845. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:110

F7A955              	100.00%		B3L2Z4              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for B3L2Z4 as seed ortholog is 100%.

Group of orthologs #846. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.knowlesi:110

H2XM46              	100.00%		B3L1L3              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for B3L1L3 as seed ortholog is 100%.

Group of orthologs #847. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:109

F6VPU4              	100.00%		B3L4W5              	100.00%
Bootstrap support for F6VPU4 as seed ortholog is 100%.
Bootstrap support for B3L4W5 as seed ortholog is 100%.

Group of orthologs #848. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:109

F6YQR4              	100.00%		B3L8J3              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for B3L8J3 as seed ortholog is 100%.

Group of orthologs #849. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:109

F7A5W3              	100.00%		B3L6L7              	100.00%
Bootstrap support for F7A5W3 as seed ortholog is 100%.
Bootstrap support for B3L6L7 as seed ortholog is 100%.

Group of orthologs #850. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.knowlesi:12

F6ZIP1              	100.00%		B3L910              	100.00%
Bootstrap support for F6ZIP1 as seed ortholog is 51%.
Alternative seed ortholog is H2Y299 (1 bits away from this cluster)
Bootstrap support for B3L910 as seed ortholog is 60%.
Alternative seed ortholog is B3L4G6 (12 bits away from this cluster)

Group of orthologs #851. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:109

H2XTQ3              	100.00%		B3L766              	100.00%
Bootstrap support for H2XTQ3 as seed ortholog is 100%.
Bootstrap support for B3L766 as seed ortholog is 100%.

Group of orthologs #852. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.knowlesi:109

H2XR58              	100.00%		B3L9Y0              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for B3L9Y0 as seed ortholog is 100%.

Group of orthologs #853. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.knowlesi:108

F6YQ60              	100.00%		B3L784              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for B3L784 as seed ortholog is 100%.

Group of orthologs #854. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.knowlesi:108

F7BNU5              	100.00%		B3L0N9              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for B3L0N9 as seed ortholog is 100%.

Group of orthologs #855. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.knowlesi:108

F7A5L4              	100.00%		B3L6J2              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for B3L6J2 as seed ortholog is 100%.

Group of orthologs #856. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.knowlesi:22

F6T4U7              	100.00%		B3L9K6              	100.00%
F6ZUV3              	29.07%		
Bootstrap support for F6T4U7 as seed ortholog is 89%.
Bootstrap support for B3L9K6 as seed ortholog is 69%.
Alternative seed ortholog is B3L5G8 (22 bits away from this cluster)

Group of orthologs #857. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.knowlesi:107

F6PM75              	100.00%		B3L246              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for B3L246 as seed ortholog is 100%.

Group of orthologs #858. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.knowlesi:49

F6VLD0              	100.00%		B3LBJ3              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for B3LBJ3 as seed ortholog is 98%.

Group of orthologs #859. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.knowlesi:107

F6YSQ6              	100.00%		B3L513              	100.00%
Bootstrap support for F6YSQ6 as seed ortholog is 77%.
Bootstrap support for B3L513 as seed ortholog is 100%.

Group of orthologs #860. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.knowlesi:46

H2XZV4              	100.00%		B3L5R4              	100.00%
F7AW67              	32.84%		
Bootstrap support for H2XZV4 as seed ortholog is 83%.
Bootstrap support for B3L5R4 as seed ortholog is 85%.

Group of orthologs #861. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.knowlesi:106

H2Y1N7              	100.00%		B3L9U0              	100.00%
                    	       		B3LBA8              	100.00%
Bootstrap support for H2Y1N7 as seed ortholog is 63%.
Alternative seed ortholog is F6RM35 (9 bits away from this cluster)
Bootstrap support for B3L9U0 as seed ortholog is 100%.
Bootstrap support for B3LBA8 as seed ortholog is 100%.

Group of orthologs #862. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:106

F6SW03              	100.00%		B3KZ63              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for B3KZ63 as seed ortholog is 100%.

Group of orthologs #863. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.knowlesi:106

F6WHB0              	100.00%		B3L2S2              	100.00%
Bootstrap support for F6WHB0 as seed ortholog is 57%.
Alternative seed ortholog is H2Y3K2 (4 bits away from this cluster)
Bootstrap support for B3L2S2 as seed ortholog is 100%.

Group of orthologs #864. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:106

F6VFA0              	100.00%		B3L554              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for B3L554 as seed ortholog is 100%.

Group of orthologs #865. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:106

F6Y089              	100.00%		B3L098              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #866. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.knowlesi:106

F6VXS0              	100.00%		B3L5K5              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for B3L5K5 as seed ortholog is 100%.

Group of orthologs #867. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.knowlesi:29

F6TNN9              	100.00%		B3L1G3              	100.00%
Bootstrap support for F6TNN9 as seed ortholog is 85%.
Bootstrap support for B3L1G3 as seed ortholog is 84%.

Group of orthologs #868. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.knowlesi:105

F6UTG5              	100.00%		B3L1V7              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 96%.
Bootstrap support for B3L1V7 as seed ortholog is 100%.

Group of orthologs #869. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.knowlesi:33

F6WPK3              	100.00%		B3L198              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for B3L198 as seed ortholog is 81%.

Group of orthologs #870. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.knowlesi:105

F6X1E1              	100.00%		B3L8G7              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for B3L8G7 as seed ortholog is 100%.

Group of orthologs #871. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.knowlesi:63

F7B3P4              	100.00%		B3L3Q7              	100.00%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for B3L3Q7 as seed ortholog is 94%.

Group of orthologs #872. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:61

F7B012              	100.00%		B3L4D9              	100.00%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for B3L4D9 as seed ortholog is 99%.

Group of orthologs #873. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

F6THM1              	100.00%		B3L298              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for B3L298 as seed ortholog is 100%.

Group of orthologs #874. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:104

F6UTK0              	100.00%		B3L2Q6              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 99%.
Bootstrap support for B3L2Q6 as seed ortholog is 100%.

Group of orthologs #875. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

F6VKC0              	100.00%		B3L6Z8              	100.00%
Bootstrap support for F6VKC0 as seed ortholog is 100%.
Bootstrap support for B3L6Z8 as seed ortholog is 100%.

Group of orthologs #876. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

F6XRM1              	100.00%		B3LD37              	100.00%
Bootstrap support for F6XRM1 as seed ortholog is 100%.
Bootstrap support for B3LD37 as seed ortholog is 100%.

Group of orthologs #877. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

H2XPM9              	100.00%		B3L372              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 100%.
Bootstrap support for B3L372 as seed ortholog is 100%.

Group of orthologs #878. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

H2XUI3              	100.00%		B3L090              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for B3L090 as seed ortholog is 100%.

Group of orthologs #879. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

F7BBF0              	100.00%		B3LBV1              	100.00%
Bootstrap support for F7BBF0 as seed ortholog is 100%.
Bootstrap support for B3LBV1 as seed ortholog is 100%.

Group of orthologs #880. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.knowlesi:104

H2Y0C3              	100.00%		B3L9Y4              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for B3L9Y4 as seed ortholog is 100%.

Group of orthologs #881. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:44

F6PIE8              	100.00%		B3LC98              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 89%.
Bootstrap support for B3LC98 as seed ortholog is 80%.

Group of orthologs #882. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.knowlesi:23

F6X2B6              	100.00%		B3LC27              	100.00%
Bootstrap support for F6X2B6 as seed ortholog is 71%.
Alternative seed ortholog is F7BHB8 (17 bits away from this cluster)
Bootstrap support for B3LC27 as seed ortholog is 73%.
Alternative seed ortholog is B3L4W2 (23 bits away from this cluster)

Group of orthologs #883. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.knowlesi:103

H2XKS6              	100.00%		B3KZ52              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for B3KZ52 as seed ortholog is 100%.

Group of orthologs #884. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

F6Q484              	100.00%		B3L1P2              	100.00%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for B3L1P2 as seed ortholog is 100%.

Group of orthologs #885. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

F6RRL3              	100.00%		B3L4A3              	100.00%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for B3L4A3 as seed ortholog is 100%.

Group of orthologs #886. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

F6WNH2              	100.00%		B3L2R8              	100.00%
Bootstrap support for F6WNH2 as seed ortholog is 100%.
Bootstrap support for B3L2R8 as seed ortholog is 100%.

Group of orthologs #887. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

F6YF30              	100.00%		B3KZ11              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for B3KZ11 as seed ortholog is 100%.

Group of orthologs #888. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

F6WRK0              	100.00%		B3L3N5              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for B3L3N5 as seed ortholog is 100%.

Group of orthologs #889. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

F6Z2X4              	100.00%		B3LC37              	100.00%
Bootstrap support for F6Z2X4 as seed ortholog is 100%.
Bootstrap support for B3LC37 as seed ortholog is 100%.

Group of orthologs #890. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

Q7YZS7              	100.00%		B3L3A4              	100.00%
Bootstrap support for Q7YZS7 as seed ortholog is 100%.
Bootstrap support for B3L3A4 as seed ortholog is 100%.

Group of orthologs #891. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.knowlesi:102

Q4H2Q4              	100.00%		B3L9C0              	100.00%
Bootstrap support for Q4H2Q4 as seed ortholog is 100%.
Bootstrap support for B3L9C0 as seed ortholog is 100%.

Group of orthologs #892. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.knowlesi:101

F6ZVS4              	100.00%		B3KZ84              	100.00%
F6UWB9              	32.58%		
Bootstrap support for F6ZVS4 as seed ortholog is 100%.
Bootstrap support for B3KZ84 as seed ortholog is 100%.

Group of orthologs #893. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.knowlesi:101

F6RS75              	100.00%		B3L2Z2              	100.00%
Bootstrap support for F6RS75 as seed ortholog is 100%.
Bootstrap support for B3L2Z2 as seed ortholog is 100%.

Group of orthologs #894. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.knowlesi:101

F6QSH0              	100.00%		B3LBK1              	100.00%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for B3LBK1 as seed ortholog is 100%.

Group of orthologs #895. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.knowlesi:101

F6T8R8              	100.00%		B3LAG4              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for B3LAG4 as seed ortholog is 100%.

Group of orthologs #896. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.knowlesi:101

F6XTZ6              	100.00%		B3L7J1              	100.00%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for B3L7J1 as seed ortholog is 100%.

Group of orthologs #897. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.knowlesi:100

F6YAZ4              	100.00%		B3L4K3              	100.00%
                    	       		B3LC36              	37.69%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for B3L4K3 as seed ortholog is 100%.

Group of orthologs #898. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.knowlesi:100

H2XR44              	100.00%		B3L571              	100.00%
F6UDM9              	17.12%		
Bootstrap support for H2XR44 as seed ortholog is 100%.
Bootstrap support for B3L571 as seed ortholog is 100%.

Group of orthologs #899. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.knowlesi:100

F6WUC3              	100.00%		B3L5Z9              	100.00%
Bootstrap support for F6WUC3 as seed ortholog is 100%.
Bootstrap support for B3L5Z9 as seed ortholog is 100%.

Group of orthologs #900. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.knowlesi:100

F6WF37              	100.00%		B3L8R0              	100.00%
Bootstrap support for F6WF37 as seed ortholog is 100%.
Bootstrap support for B3L8R0 as seed ortholog is 100%.

Group of orthologs #901. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.knowlesi:100

F7BDS3              	100.00%		B3L0G5              	100.00%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for B3L0G5 as seed ortholog is 100%.

Group of orthologs #902. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6S146              	100.00%		B3L774              	100.00%
F6RQ08              	12.94%		
Bootstrap support for F6S146 as seed ortholog is 100%.
Bootstrap support for B3L774 as seed ortholog is 100%.

Group of orthologs #903. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6XWH9              	100.00%		B3L6I6              	100.00%
                    	       		B3L5W0              	15.65%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for B3L6I6 as seed ortholog is 100%.

Group of orthologs #904. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6ZS71              	100.00%		B3LC76              	100.00%
F6VQC2              	75.73%		
Bootstrap support for F6ZS71 as seed ortholog is 100%.
Bootstrap support for B3LC76 as seed ortholog is 100%.

Group of orthologs #905. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6PMD1              	100.00%		B3L9Z9              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for B3L9Z9 as seed ortholog is 100%.

Group of orthologs #906. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6Q021              	100.00%		B3LBQ7              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for B3LBQ7 as seed ortholog is 100%.

Group of orthologs #907. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6WWT1              	100.00%		B3L3P6              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for B3L3P6 as seed ortholog is 100%.

Group of orthologs #908. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6YSM6              	100.00%		B3L0Q9              	100.00%
Bootstrap support for F6YSM6 as seed ortholog is 100%.
Bootstrap support for B3L0Q9 as seed ortholog is 100%.

Group of orthologs #909. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

F6UA18              	100.00%		B3LAR6              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for B3LAR6 as seed ortholog is 100%.

Group of orthologs #910. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.knowlesi:99

H2XNY0              	100.00%		B3LD71              	100.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for B3LD71 as seed ortholog is 100%.

Group of orthologs #911. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.knowlesi:98

F6RKZ8              	100.00%		B3L001              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for B3L001 as seed ortholog is 100%.

Group of orthologs #912. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.knowlesi:98

C4B8X4              	100.00%		B3L4J8              	100.00%
Bootstrap support for C4B8X4 as seed ortholog is 100%.
Bootstrap support for B3L4J8 as seed ortholog is 100%.

Group of orthologs #913. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.knowlesi:98

F6VBG8              	100.00%		B3L1I5              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for B3L1I5 as seed ortholog is 100%.

Group of orthologs #914. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.knowlesi:98

F6VN74              	100.00%		B3L1H2              	100.00%
Bootstrap support for F6VN74 as seed ortholog is 100%.
Bootstrap support for B3L1H2 as seed ortholog is 100%.

Group of orthologs #915. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.knowlesi:98

F7AW07              	100.00%		B3LAA1              	100.00%
Bootstrap support for F7AW07 as seed ortholog is 100%.
Bootstrap support for B3LAA1 as seed ortholog is 100%.

Group of orthologs #916. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.knowlesi:52

H2XY81              	100.00%		B3LB79              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for B3LB79 as seed ortholog is 99%.

Group of orthologs #917. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.knowlesi:97

F6R6C4              	100.00%		B3L3V9              	100.00%
Bootstrap support for F6R6C4 as seed ortholog is 100%.
Bootstrap support for B3L3V9 as seed ortholog is 100%.

Group of orthologs #918. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.knowlesi:97

F6Y4L7              	100.00%		B3L1B4              	100.00%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for B3L1B4 as seed ortholog is 100%.

Group of orthologs #919. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.knowlesi:97

H2XWE7              	100.00%		B3L5N0              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for B3L5N0 as seed ortholog is 100%.

Group of orthologs #920. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.knowlesi:97

H2XV35              	100.00%		B3LB32              	100.00%
Bootstrap support for H2XV35 as seed ortholog is 100%.
Bootstrap support for B3LB32 as seed ortholog is 100%.

Group of orthologs #921. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:96

F6S2G5              	100.00%		B3L2X0              	100.00%
Bootstrap support for F6S2G5 as seed ortholog is 100%.
Bootstrap support for B3L2X0 as seed ortholog is 100%.

Group of orthologs #922. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:96

F6UG66              	100.00%		B3L0Q3              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for B3L0Q3 as seed ortholog is 100%.

Group of orthologs #923. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:96

F6SPH4              	100.00%		B3LAV0              	100.00%
Bootstrap support for F6SPH4 as seed ortholog is 100%.
Bootstrap support for B3LAV0 as seed ortholog is 100%.

Group of orthologs #924. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.knowlesi:96

F6U1Q3              	100.00%		B3L8R6              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 91%.
Bootstrap support for B3L8R6 as seed ortholog is 100%.

Group of orthologs #925. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:96

F6V437              	100.00%		B3LBX2              	100.00%
Bootstrap support for F6V437 as seed ortholog is 100%.
Bootstrap support for B3LBX2 as seed ortholog is 100%.

Group of orthologs #926. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:7

F6Z8N3              	100.00%		B3L889              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for B3L889 as seed ortholog is 64%.
Alternative seed ortholog is B3L5Q0 (7 bits away from this cluster)

Group of orthologs #927. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:49

F7AH68              	100.00%		B3L8E3              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 100%.
Bootstrap support for B3L8E3 as seed ortholog is 97%.

Group of orthologs #928. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.knowlesi:96

F7BBJ6              	100.00%		B3LD31              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for B3LD31 as seed ortholog is 100%.

Group of orthologs #929. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.knowlesi:95

F6SRD6              	100.00%		B3L2R5              	100.00%
Bootstrap support for F6SRD6 as seed ortholog is 100%.
Bootstrap support for B3L2R5 as seed ortholog is 100%.

Group of orthologs #930. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.knowlesi:94

F7BDX5              	100.00%		B3LAI5              	100.00%
F6X6U3              	55.38%		
F6QSB8              	12.03%		
F6T5Q1              	10.44%		
F6VQ32              	8.54%		
F6RDW1              	7.28%		
Bootstrap support for F7BDX5 as seed ortholog is 61%.
Alternative seed ortholog is F6Y3D6 (10 bits away from this cluster)
Bootstrap support for B3LAI5 as seed ortholog is 100%.

Group of orthologs #931. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

F6S925              	100.00%		B3L6I7              	100.00%
F6S909              	43.22%		
Q4H398              	38.49%		
Q4H396              	26.34%		
Bootstrap support for F6S925 as seed ortholog is 100%.
Bootstrap support for B3L6I7 as seed ortholog is 100%.

Group of orthologs #932. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

F6R982              	100.00%		B3L987              	100.00%
Bootstrap support for F6R982 as seed ortholog is 100%.
Bootstrap support for B3L987 as seed ortholog is 100%.

Group of orthologs #933. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:14

F6Y043              	100.00%		B3L053              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 100%.
Bootstrap support for B3L053 as seed ortholog is 86%.

Group of orthologs #934. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:45

F6YAA4              	100.00%		B3L413              	100.00%
Bootstrap support for F6YAA4 as seed ortholog is 100%.
Bootstrap support for B3L413 as seed ortholog is 82%.

Group of orthologs #935. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

F6VAW2              	100.00%		B3LAF4              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for B3LAF4 as seed ortholog is 100%.

Group of orthologs #936. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

F6ZXN3              	100.00%		B3L3K1              	100.00%
Bootstrap support for F6ZXN3 as seed ortholog is 100%.
Bootstrap support for B3L3K1 as seed ortholog is 100%.

Group of orthologs #937. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

F7B480              	100.00%		B3L3D9              	100.00%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for B3L3D9 as seed ortholog is 100%.

Group of orthologs #938. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

H2XM66              	100.00%		B3L829              	100.00%
Bootstrap support for H2XM66 as seed ortholog is 100%.
Bootstrap support for B3L829 as seed ortholog is 100%.

Group of orthologs #939. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

H2XRE3              	100.00%		B3L7Y1              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for B3L7Y1 as seed ortholog is 100%.

Group of orthologs #940. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

H2XRS4              	100.00%		B3LCF3              	100.00%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for B3LCF3 as seed ortholog is 100%.

Group of orthologs #941. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:94

Q4H2R5              	100.00%		B3L262              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for B3L262 as seed ortholog is 100%.

Group of orthologs #942. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.knowlesi:36

H2XZ35              	100.00%		B3LCU7              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 100%.
Bootstrap support for B3LCU7 as seed ortholog is 86%.

Group of orthologs #943. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.knowlesi:93

F6ZLL7              	100.00%		B3L2I4              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for B3L2I4 as seed ortholog is 100%.

Group of orthologs #944. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.knowlesi:93

F6ZSB0              	100.00%		B3L2L4              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for B3L2L4 as seed ortholog is 100%.

Group of orthologs #945. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.knowlesi:93

F7AG49              	100.00%		B3L3V0              	100.00%
Bootstrap support for F7AG49 as seed ortholog is 100%.
Bootstrap support for B3L3V0 as seed ortholog is 100%.

Group of orthologs #946. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.knowlesi:92

F6RJZ1              	100.00%		B3L9N2              	100.00%
Bootstrap support for F6RJZ1 as seed ortholog is 100%.
Bootstrap support for B3L9N2 as seed ortholog is 100%.

Group of orthologs #947. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.knowlesi:92

F6WNR2              	100.00%		B3L052              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for B3L052 as seed ortholog is 100%.

Group of orthologs #948. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.knowlesi:92

F6YRM0              	100.00%		B3L4U3              	100.00%
Bootstrap support for F6YRM0 as seed ortholog is 67%.
Alternative seed ortholog is F6SL18 (13 bits away from this cluster)
Bootstrap support for B3L4U3 as seed ortholog is 100%.

Group of orthologs #949. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.knowlesi:32

F7B496              	100.00%		B3L6A4              	100.00%
Bootstrap support for F7B496 as seed ortholog is 88%.
Bootstrap support for B3L6A4 as seed ortholog is 80%.

Group of orthologs #950. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.knowlesi:92

H2XWD3              	100.00%		B3KZI5              	100.00%
Bootstrap support for H2XWD3 as seed ortholog is 100%.
Bootstrap support for B3KZI5 as seed ortholog is 100%.

Group of orthologs #951. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.knowlesi:92

F7BME9              	100.00%		B3LBC5              	100.00%
Bootstrap support for F7BME9 as seed ortholog is 100%.
Bootstrap support for B3LBC5 as seed ortholog is 100%.

Group of orthologs #952. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.knowlesi:92

H2XQM2              	100.00%		B3L7V0              	100.00%
Bootstrap support for H2XQM2 as seed ortholog is 100%.
Bootstrap support for B3L7V0 as seed ortholog is 100%.

Group of orthologs #953. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:29

C4B8X5              	100.00%		B3L9F0              	100.00%
F6ZDX4              	6.20%		B3L274              	8.25%
Bootstrap support for C4B8X5 as seed ortholog is 100%.
Bootstrap support for B3L9F0 as seed ortholog is 55%.
Alternative seed ortholog is B3L3P4 (29 bits away from this cluster)

Group of orthologs #954. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F6QEE3              	100.00%		B3L025              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 100%.
Bootstrap support for B3L025 as seed ortholog is 100%.

Group of orthologs #955. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F6SM47              	100.00%		B3L2L3              	100.00%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for B3L2L3 as seed ortholog is 100%.

Group of orthologs #956. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F6VIA9              	100.00%		B3L3E3              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for B3L3E3 as seed ortholog is 100%.

Group of orthologs #957. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F6YCP6              	100.00%		B3L105              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for B3L105 as seed ortholog is 100%.

Group of orthologs #958. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F7AI05              	100.00%		B3L4F5              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for B3L4F5 as seed ortholog is 100%.

Group of orthologs #959. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F6ZF76              	100.00%		B3L8I8              	100.00%
Bootstrap support for F6ZF76 as seed ortholog is 100%.
Bootstrap support for B3L8I8 as seed ortholog is 100%.

Group of orthologs #960. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

F7BB49              	100.00%		B3LCH0              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for B3LCH0 as seed ortholog is 100%.

Group of orthologs #961. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.knowlesi:91

H2XTC9              	100.00%		B3L6L2              	100.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for B3L6L2 as seed ortholog is 100%.

Group of orthologs #962. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.knowlesi:90

F6U8M8              	100.00%		B3L1E4              	100.00%
F6XUK1              	13.13%		
Bootstrap support for F6U8M8 as seed ortholog is 84%.
Bootstrap support for B3L1E4 as seed ortholog is 100%.

Group of orthologs #963. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.knowlesi:90

F6RBK2              	100.00%		B3L798              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 100%.
Bootstrap support for B3L798 as seed ortholog is 100%.

Group of orthologs #964. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.knowlesi:90

F6ZYA6              	100.00%		B3LD76              	100.00%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for B3LD76 as seed ortholog is 100%.

Group of orthologs #965. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.knowlesi:90

H2XJN8              	100.00%		B3LCE8              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for B3LCE8 as seed ortholog is 100%.

Group of orthologs #966. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.knowlesi:89

F6SVU6              	100.00%		B3KZM6              	100.00%
L7N0U5              	64.29%		B3KZM7              	12.69%
H2XS65              	26.93%		B3L5A6              	5.36%
F6VTQ0              	26.35%		
F6ULA0              	26.35%		
F6Q966              	16.51%		
H2Y1F0              	16.28%		
H2XKG0              	16.16%		
F6PND8              	15.57%		
H2Y3K6              	12.76%		
Bootstrap support for F6SVU6 as seed ortholog is 100%.
Bootstrap support for B3KZM6 as seed ortholog is 100%.

Group of orthologs #967. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.knowlesi:89

F7A160              	100.00%		B3L7C4              	100.00%
H2Y2E8              	8.07%		
Bootstrap support for F7A160 as seed ortholog is 100%.
Bootstrap support for B3L7C4 as seed ortholog is 100%.

Group of orthologs #968. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.knowlesi:22

F6QEH2              	100.00%		B3L004              	100.00%
Bootstrap support for F6QEH2 as seed ortholog is 65%.
Alternative seed ortholog is F6TXM9 (9 bits away from this cluster)
Bootstrap support for B3L004 as seed ortholog is 69%.
Alternative seed ortholog is B3KZJ2 (22 bits away from this cluster)

Group of orthologs #969. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.knowlesi:89

F6X073              	100.00%		B3L591              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for B3L591 as seed ortholog is 100%.

Group of orthologs #970. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.knowlesi:89

F7ACM5              	100.00%		B3KZH0              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for B3KZH0 as seed ortholog is 100%.

Group of orthologs #971. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.knowlesi:29

F6XMT9              	100.00%		B3L713              	100.00%
Bootstrap support for F6XMT9 as seed ortholog is 84%.
Bootstrap support for B3L713 as seed ortholog is 83%.

Group of orthologs #972. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 P.knowlesi:89

F6VR17              	100.00%		B3LDB0              	100.00%
Bootstrap support for F6VR17 as seed ortholog is 80%.
Bootstrap support for B3LDB0 as seed ortholog is 100%.

Group of orthologs #973. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.knowlesi:22

H2XSA5              	100.00%		B3L8Y5              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for B3L8Y5 as seed ortholog is 94%.

Group of orthologs #974. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.knowlesi:88

F6V2B2              	100.00%		B3L0R1              	100.00%
Bootstrap support for F6V2B2 as seed ortholog is 100%.
Bootstrap support for B3L0R1 as seed ortholog is 100%.

Group of orthologs #975. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.knowlesi:88

F6UTS4              	100.00%		B3L2L8              	100.00%
Bootstrap support for F6UTS4 as seed ortholog is 100%.
Bootstrap support for B3L2L8 as seed ortholog is 100%.

Group of orthologs #976. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.knowlesi:88

F6XR12              	100.00%		B3LD96              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for B3LD96 as seed ortholog is 100%.

Group of orthologs #977. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.knowlesi:88

H2Y2U8              	100.00%		B3L7P2              	100.00%
Bootstrap support for H2Y2U8 as seed ortholog is 100%.
Bootstrap support for B3L7P2 as seed ortholog is 100%.

Group of orthologs #978. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.knowlesi:21

F6YXQ0              	100.00%		B3L9J3              	100.00%
H2XXT0              	7.03%		
Bootstrap support for F6YXQ0 as seed ortholog is 82%.
Bootstrap support for B3L9J3 as seed ortholog is 86%.

Group of orthologs #979. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.knowlesi:86

F6SQC0              	100.00%		B3L144              	100.00%
Bootstrap support for F6SQC0 as seed ortholog is 100%.
Bootstrap support for B3L144 as seed ortholog is 100%.

Group of orthologs #980. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.knowlesi:86

F6SSS2              	100.00%		B3L4R7              	100.00%
Bootstrap support for F6SSS2 as seed ortholog is 100%.
Bootstrap support for B3L4R7 as seed ortholog is 100%.

Group of orthologs #981. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.knowlesi:86

F7B7K2              	100.00%		B3L4P5              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for B3L4P5 as seed ortholog is 100%.

Group of orthologs #982. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.knowlesi:86

Q1RL49              	100.00%		B3L4G2              	100.00%
Bootstrap support for Q1RL49 as seed ortholog is 100%.
Bootstrap support for B3L4G2 as seed ortholog is 100%.

Group of orthologs #983. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:85

F6QMA7              	100.00%		B3L953              	100.00%
H2XPQ4              	34.94%		
Bootstrap support for F6QMA7 as seed ortholog is 100%.
Bootstrap support for B3L953 as seed ortholog is 100%.

Group of orthologs #984. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:85

F6YU89              	100.00%		B3L975              	100.00%
F6XW18              	18.35%		
Bootstrap support for F6YU89 as seed ortholog is 100%.
Bootstrap support for B3L975 as seed ortholog is 100%.

Group of orthologs #985. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:85

F6S1A9              	100.00%		B3L3K3              	100.00%
Bootstrap support for F6S1A9 as seed ortholog is 100%.
Bootstrap support for B3L3K3 as seed ortholog is 100%.

Group of orthologs #986. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.knowlesi:85

F6V396              	100.00%		B3L0D7              	100.00%
Bootstrap support for F6V396 as seed ortholog is 69%.
Alternative seed ortholog is F6WHM9 (16 bits away from this cluster)
Bootstrap support for B3L0D7 as seed ortholog is 100%.

Group of orthologs #987. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:85

F6YUN5              	100.00%		B3L7X7              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for B3L7X7 as seed ortholog is 100%.

Group of orthologs #988. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:85

H2XVN4              	100.00%		B3L790              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for B3L790 as seed ortholog is 100%.

Group of orthologs #989. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.knowlesi:85

Q1RPU6              	100.00%		B3L0T6              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for B3L0T6 as seed ortholog is 100%.

Group of orthologs #990. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.knowlesi:84

F6SM68              	100.00%		B3L7U6              	100.00%
Bootstrap support for F6SM68 as seed ortholog is 100%.
Bootstrap support for B3L7U6 as seed ortholog is 100%.

Group of orthologs #991. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.knowlesi:84

F6QVW6              	100.00%		B3LD22              	100.00%
Bootstrap support for F6QVW6 as seed ortholog is 100%.
Bootstrap support for B3LD22 as seed ortholog is 100%.

Group of orthologs #992. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.knowlesi:84

F6YMZ5              	100.00%		B3L9F1              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for B3L9F1 as seed ortholog is 100%.

Group of orthologs #993. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.knowlesi:84

H2XKF1              	100.00%		B3L9H6              	100.00%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for B3L9H6 as seed ortholog is 100%.

Group of orthologs #994. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.knowlesi:83

F6TLE4              	100.00%		B3KZA4              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for B3KZA4 as seed ortholog is 100%.

Group of orthologs #995. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.knowlesi:83

F6W248              	100.00%		B3L1K6              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for B3L1K6 as seed ortholog is 100%.

Group of orthologs #996. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F6Q4X5              	100.00%		B3L8L0              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for B3L8L0 as seed ortholog is 100%.

Group of orthologs #997. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F6R035              	100.00%		B3L9N7              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for B3L9N7 as seed ortholog is 100%.

Group of orthologs #998. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F6UW27              	100.00%		B3L9E9              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for B3L9E9 as seed ortholog is 100%.

Group of orthologs #999. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F6ZZX7              	100.00%		B3L307              	100.00%
Bootstrap support for F6ZZX7 as seed ortholog is 100%.
Bootstrap support for B3L307 as seed ortholog is 100%.

Group of orthologs #1000. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F7AFF3              	100.00%		B3L936              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for B3L936 as seed ortholog is 100%.

Group of orthologs #1001. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F7BQ69              	100.00%		B3L8M6              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for B3L8M6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

F7B6C9              	100.00%		B3LBN4              	100.00%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for B3LBN4 as seed ortholog is 100%.

Group of orthologs #1003. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 P.knowlesi:82

H2XXA8              	100.00%		B3L525              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 54%.
Alternative seed ortholog is F6Y9P0 (5 bits away from this cluster)
Bootstrap support for B3L525 as seed ortholog is 100%.

Group of orthologs #1004. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

H2XY20              	100.00%		B3L5D7              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for B3L5D7 as seed ortholog is 100%.

Group of orthologs #1005. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.knowlesi:82

H2XSQ8              	100.00%		B3LBQ3              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for B3LBQ3 as seed ortholog is 100%.

Group of orthologs #1006. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.knowlesi:81

F6R255              	100.00%		B3L399              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for B3L399 as seed ortholog is 100%.

Group of orthologs #1007. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.knowlesi:81

H2XL05              	100.00%		B3L0Z6              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for B3L0Z6 as seed ortholog is 100%.

Group of orthologs #1008. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.knowlesi:81

H2XXZ1              	100.00%		B3L2D8              	100.00%
Bootstrap support for H2XXZ1 as seed ortholog is 100%.
Bootstrap support for B3L2D8 as seed ortholog is 100%.

Group of orthologs #1009. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.knowlesi:80

H2XQJ8              	100.00%		B3KZH5              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for B3KZH5 as seed ortholog is 100%.

Group of orthologs #1010. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.knowlesi:80

H2XSS0              	100.00%		B3LB29              	100.00%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for B3LB29 as seed ortholog is 100%.

Group of orthologs #1011. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

F6R2C6              	100.00%		B3LAG6              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for B3LAG6 as seed ortholog is 100%.

Group of orthologs #1012. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

F6ZD00              	100.00%		B3L3U4              	100.00%
Bootstrap support for F6ZD00 as seed ortholog is 100%.
Bootstrap support for B3L3U4 as seed ortholog is 100%.

Group of orthologs #1013. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

H2XLA2              	100.00%		B3L433              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for B3L433 as seed ortholog is 100%.

Group of orthologs #1014. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

F7AX45              	100.00%		B3LCD3              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for B3LCD3 as seed ortholog is 100%.

Group of orthologs #1015. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:21

H2XNS7              	100.00%		B3L664              	100.00%
Bootstrap support for H2XNS7 as seed ortholog is 100%.
Bootstrap support for B3L664 as seed ortholog is 62%.
Alternative seed ortholog is B3LCA4 (21 bits away from this cluster)

Group of orthologs #1016. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

H2XKD8              	100.00%		B3L9G1              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for B3L9G1 as seed ortholog is 100%.

Group of orthologs #1017. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:18

H2Y2X6              	100.00%		B3L0T1              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for B3L0T1 as seed ortholog is 78%.

Group of orthologs #1018. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

H2Y184              	100.00%		B3L379              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for B3L379 as seed ortholog is 100%.

Group of orthologs #1019. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

H2XVZ6              	100.00%		B3LAV7              	100.00%
Bootstrap support for H2XVZ6 as seed ortholog is 100%.
Bootstrap support for B3LAV7 as seed ortholog is 100%.

Group of orthologs #1020. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.knowlesi:79

Q4H3U1              	100.00%		B3LAD0              	100.00%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for B3LAD0 as seed ortholog is 100%.

Group of orthologs #1021. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.knowlesi:78

F6TNU2              	100.00%		B3L1X5              	100.00%
Bootstrap support for F6TNU2 as seed ortholog is 100%.
Bootstrap support for B3L1X5 as seed ortholog is 100%.

Group of orthologs #1022. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.knowlesi:78

F6WTN6              	100.00%		B3L2Q4              	100.00%
Bootstrap support for F6WTN6 as seed ortholog is 100%.
Bootstrap support for B3L2Q4 as seed ortholog is 100%.

Group of orthologs #1023. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.knowlesi:78

H2XU65              	100.00%		B3LBN2              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for B3LBN2 as seed ortholog is 100%.

Group of orthologs #1024. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.knowlesi:78

Q2PEE2              	100.00%		B3L2U6              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 93%.
Bootstrap support for B3L2U6 as seed ortholog is 100%.

Group of orthologs #1025. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6REF5              	100.00%		B3L4N8              	100.00%
F6XGI2              	62.32%		
F7AV16              	44.89%		
H2XP66              	14.61%		
F7A934              	5.99%		
Bootstrap support for F6REF5 as seed ortholog is 100%.
Bootstrap support for B3L4N8 as seed ortholog is 100%.

Group of orthologs #1026. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6UJL9              	100.00%		B3L2J8              	100.00%
F6QX49              	21.09%		
F6XU54              	17.36%		
H2XWL5              	6.05%		
Bootstrap support for F6UJL9 as seed ortholog is 100%.
Bootstrap support for B3L2J8 as seed ortholog is 100%.

Group of orthologs #1027. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F7AMQ9              	100.00%		B3L637              	100.00%
F6XJ57              	30.57%		
H2XR17              	10.83%		
Bootstrap support for F7AMQ9 as seed ortholog is 100%.
Bootstrap support for B3L637 as seed ortholog is 100%.

Group of orthologs #1028. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6VQB3              	100.00%		B3L720              	100.00%
H2XML0              	59.38%		
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for B3L720 as seed ortholog is 100%.

Group of orthologs #1029. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:21

H2XWC1              	100.00%		B3L8Q0              	100.00%
F6QZ03              	7.53%		
Bootstrap support for H2XWC1 as seed ortholog is 100%.
Bootstrap support for B3L8Q0 as seed ortholog is 79%.

Group of orthologs #1030. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6QU62              	100.00%		B3L4N9              	100.00%
Bootstrap support for F6QU62 as seed ortholog is 100%.
Bootstrap support for B3L4N9 as seed ortholog is 100%.

Group of orthologs #1031. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6QEH8              	100.00%		B3LA45              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for B3LA45 as seed ortholog is 100%.

Group of orthologs #1032. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6XW35              	100.00%		B3L279              	100.00%
Bootstrap support for F6XW35 as seed ortholog is 100%.
Bootstrap support for B3L279 as seed ortholog is 100%.

Group of orthologs #1033. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

F6YNH3              	100.00%		B3LAX6              	100.00%
Bootstrap support for F6YNH3 as seed ortholog is 100%.
Bootstrap support for B3LAX6 as seed ortholog is 100%.

Group of orthologs #1034. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.knowlesi:77

H2Y2E7              	100.00%		B3L1B3              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 100%.
Bootstrap support for B3L1B3 as seed ortholog is 100%.

Group of orthologs #1035. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.knowlesi:76

F6VIC3              	100.00%		B3LA19              	100.00%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for B3LA19 as seed ortholog is 100%.

Group of orthologs #1036. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.knowlesi:76

Q8I7D9              	100.00%		B3L0Q4              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for B3L0Q4 as seed ortholog is 100%.

Group of orthologs #1037. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.knowlesi:75

F6SN27              	100.00%		B3LAK2              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.knowlesi:75

F6XJ18              	100.00%		B3L5M1              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for B3L5M1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.knowlesi:74

F6QQM7              	100.00%		B3L0N5              	100.00%
F6XH20              	42.57%		
Bootstrap support for F6QQM7 as seed ortholog is 56%.
Alternative seed ortholog is F7AWS8 (19 bits away from this cluster)
Bootstrap support for B3L0N5 as seed ortholog is 100%.

Group of orthologs #1040. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:74

F6W282              	100.00%		B3L4E0              	100.00%
Bootstrap support for F6W282 as seed ortholog is 100%.
Bootstrap support for B3L4E0 as seed ortholog is 100%.

Group of orthologs #1041. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:74

F6WQD2              	100.00%		B3L5Q8              	100.00%
Bootstrap support for F6WQD2 as seed ortholog is 100%.
Bootstrap support for B3L5Q8 as seed ortholog is 100%.

Group of orthologs #1042. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:74

H2XL84              	100.00%		B3L743              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for B3L743 as seed ortholog is 100%.

Group of orthologs #1043. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.knowlesi:14

H2XKM5              	100.00%		B3LBL0              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for B3LBL0 as seed ortholog is 76%.

Group of orthologs #1044. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.knowlesi:73

F6QTI2              	100.00%		B3L6U3              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for B3L6U3 as seed ortholog is 100%.

Group of orthologs #1045. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.knowlesi:73

F6TJA4              	100.00%		B3L354              	100.00%
Bootstrap support for F6TJA4 as seed ortholog is 100%.
Bootstrap support for B3L354 as seed ortholog is 100%.

Group of orthologs #1046. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.knowlesi:73

H2XLW7              	100.00%		B3L7J5              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for B3L7J5 as seed ortholog is 100%.

Group of orthologs #1047. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.knowlesi:28

F7B860              	100.00%		B3LAN0              	100.00%
F6ZIB9              	11.74%		
Bootstrap support for F7B860 as seed ortholog is 73%.
Alternative seed ortholog is F6T9N5 (22 bits away from this cluster)
Bootstrap support for B3LAN0 as seed ortholog is 78%.

Group of orthologs #1048. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.knowlesi:72

F6QIV0              	100.00%		B3L9C7              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for B3L9C7 as seed ortholog is 100%.

Group of orthologs #1049. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.knowlesi:72

F6XR53              	100.00%		B3L6G0              	100.00%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for B3L6G0 as seed ortholog is 100%.

Group of orthologs #1050. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.knowlesi:72

F6XWZ8              	100.00%		B3LBL5              	100.00%
Bootstrap support for F6XWZ8 as seed ortholog is 100%.
Bootstrap support for B3LBL5 as seed ortholog is 100%.

Group of orthologs #1051. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.knowlesi:72

F7BPM3              	100.00%		B3L321              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 68%.
Alternative seed ortholog is F6S7J0 (24 bits away from this cluster)
Bootstrap support for B3L321 as seed ortholog is 100%.

Group of orthologs #1052. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.knowlesi:72

H2XKP6              	100.00%		B3LA74              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for B3LA74 as seed ortholog is 100%.

Group of orthologs #1053. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.knowlesi:72

H2Y1H3              	100.00%		B3L1L8              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for B3L1L8 as seed ortholog is 100%.

Group of orthologs #1054. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.knowlesi:71

H2XXC3              	100.00%		B3L7W5              	100.00%
H2XY86              	14.72%		
H2XKL0              	10.13%		
Bootstrap support for H2XXC3 as seed ortholog is 100%.
Bootstrap support for B3L7W5 as seed ortholog is 100%.

Group of orthologs #1055. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.knowlesi:71

F6RKR7              	100.00%		B3L7N6              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for B3L7N6 as seed ortholog is 100%.

Group of orthologs #1056. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.knowlesi:71

F6PZM1              	100.00%		B3LBR2              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for B3LBR2 as seed ortholog is 100%.

Group of orthologs #1057. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.knowlesi:71

F6TJY9              	100.00%		B3L5P5              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for B3L5P5 as seed ortholog is 100%.

Group of orthologs #1058. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.knowlesi:71

F6Z910              	100.00%		B3L1A2              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for B3L1A2 as seed ortholog is 100%.

Group of orthologs #1059. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.knowlesi:25

F6Y4J7              	100.00%		B3L3P5              	100.00%
F6YVE9              	7.02%		
Bootstrap support for F6Y4J7 as seed ortholog is 65%.
Alternative seed ortholog is F7B236 (10 bits away from this cluster)
Bootstrap support for B3L3P5 as seed ortholog is 85%.

Group of orthologs #1060. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.knowlesi:70

F6SD13              	100.00%		B3KZ04              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for B3KZ04 as seed ortholog is 100%.

Group of orthologs #1061. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.knowlesi:70

F6SZQ5              	100.00%		B3L7J9              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for B3L7J9 as seed ortholog is 100%.

Group of orthologs #1062. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.knowlesi:70

H2XQL8              	100.00%		B3L2P8              	100.00%
Bootstrap support for H2XQL8 as seed ortholog is 100%.
Bootstrap support for B3L2P8 as seed ortholog is 100%.

Group of orthologs #1063. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.knowlesi:20

H2XQH7              	100.00%		B3L3F4              	100.00%
Bootstrap support for H2XQH7 as seed ortholog is 100%.
Bootstrap support for B3L3F4 as seed ortholog is 43%.
Alternative seed ortholog is B3L5B6 (20 bits away from this cluster)

Group of orthologs #1064. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.knowlesi:70

H2XW33              	100.00%		B3L0H6              	100.00%
Bootstrap support for H2XW33 as seed ortholog is 100%.
Bootstrap support for B3L0H6 as seed ortholog is 100%.

Group of orthologs #1065. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.knowlesi:69

F6YSI6              	100.00%		B3L9L8              	100.00%
F6ZLS3              	66.67%		
F6VES6              	43.71%		
F6W5K3              	23.35%		
F6TJQ3              	15.69%		
H2Y1E7              	14.53%		
F6PRI9              	13.49%		
F6TYP3              	11.54%		
Bootstrap support for F6YSI6 as seed ortholog is 100%.
Bootstrap support for B3L9L8 as seed ortholog is 100%.

Group of orthologs #1066. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.knowlesi:69

F6W7H5              	100.00%		B3L2U0              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for B3L2U0 as seed ortholog is 100%.

Group of orthologs #1067. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.knowlesi:69

F6W2W3              	100.00%		B3L880              	100.00%
Bootstrap support for F6W2W3 as seed ortholog is 100%.
Bootstrap support for B3L880 as seed ortholog is 100%.

Group of orthologs #1068. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.knowlesi:69

F7BL51              	100.00%		B3L0T5              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for B3L0T5 as seed ortholog is 100%.

Group of orthologs #1069. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.knowlesi:69

H2XJX4              	100.00%		B3LAP2              	100.00%
Bootstrap support for H2XJX4 as seed ortholog is 100%.
Bootstrap support for B3LAP2 as seed ortholog is 100%.

Group of orthologs #1070. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.knowlesi:68

F6SST4              	100.00%		B3LCW6              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for B3LCW6 as seed ortholog is 100%.

Group of orthologs #1071. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.knowlesi:68

F6ZED0              	100.00%		B3L3A5              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for B3L3A5 as seed ortholog is 100%.

Group of orthologs #1072. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 P.knowlesi:68

H2XRA8              	100.00%		B3L2F9              	100.00%
Bootstrap support for H2XRA8 as seed ortholog is 68%.
Alternative seed ortholog is F7B4P3 (12 bits away from this cluster)
Bootstrap support for B3L2F9 as seed ortholog is 100%.

Group of orthologs #1073. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

F6UEG1              	100.00%		B3L945              	100.00%
F6RSU8              	26.46%		
F6VIT0              	11.37%		
F7BAF2              	10.41%		
F7AG00              	10.03%		
F6QB79              	9.36%		
F6RWK5              	8.79%		
F6RWI8              	7.26%		
Bootstrap support for F6UEG1 as seed ortholog is 100%.
Bootstrap support for B3L945 as seed ortholog is 100%.

Group of orthologs #1074. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

H2XJX5              	100.00%		B3L4U2              	100.00%
F6QRT7              	100.00%		B3L110              	100.00%
Bootstrap support for H2XJX5 as seed ortholog is 100%.
Bootstrap support for F6QRT7 as seed ortholog is 100%.
Bootstrap support for B3L4U2 as seed ortholog is 100%.
Bootstrap support for B3L110 as seed ortholog is 100%.

Group of orthologs #1075. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

F6Y321              	100.00%		B3L0P7              	100.00%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for B3L0P7 as seed ortholog is 100%.

Group of orthologs #1076. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

F7BD80              	100.00%		B3L0D1              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for B3L0D1 as seed ortholog is 100%.

Group of orthologs #1077. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

H2XMF0              	100.00%		B3L4X9              	100.00%
Bootstrap support for H2XMF0 as seed ortholog is 100%.
Bootstrap support for B3L4X9 as seed ortholog is 100%.

Group of orthologs #1078. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

H2XJI9              	100.00%		B3LBF3              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for B3LBF3 as seed ortholog is 100%.

Group of orthologs #1079. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

H2XZ67              	100.00%		B3L160              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for B3L160 as seed ortholog is 100%.

Group of orthologs #1080. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

H2XP93              	100.00%		B3LCU9              	100.00%
Bootstrap support for H2XP93 as seed ortholog is 100%.
Bootstrap support for B3LCU9 as seed ortholog is 100%.

Group of orthologs #1081. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.knowlesi:67

H2Y013              	100.00%		B3LC71              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for B3LC71 as seed ortholog is 100%.

Group of orthologs #1082. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.knowlesi:66

F6X139              	100.00%		B3KZZ3              	100.00%
F6X7G6              	28.50%		B3LB42              	14.85%
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for B3KZZ3 as seed ortholog is 100%.

Group of orthologs #1083. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.knowlesi:66

H2XMB9              	100.00%		B3KZ06              	100.00%
Bootstrap support for H2XMB9 as seed ortholog is 100%.
Bootstrap support for B3KZ06 as seed ortholog is 100%.

Group of orthologs #1084. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.knowlesi:66

F6ZGB7              	100.00%		B3L810              	100.00%
Bootstrap support for F6ZGB7 as seed ortholog is 100%.
Bootstrap support for B3L810 as seed ortholog is 100%.

Group of orthologs #1085. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.knowlesi:66

F6ZIQ8              	100.00%		B3LBE0              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for B3LBE0 as seed ortholog is 100%.

Group of orthologs #1086. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.knowlesi:65

H2XT36              	100.00%		B3L4D3              	100.00%
F7AK54              	23.81%		
H2XZE7              	18.37%		
Bootstrap support for H2XT36 as seed ortholog is 100%.
Bootstrap support for B3L4D3 as seed ortholog is 100%.

Group of orthologs #1087. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.knowlesi:65

F7A9T3              	100.00%		B3L4M8              	100.00%
Bootstrap support for F7A9T3 as seed ortholog is 100%.
Bootstrap support for B3L4M8 as seed ortholog is 100%.

Group of orthologs #1088. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.knowlesi:64

F7AUH4              	100.00%		B3L4Q8              	100.00%
Bootstrap support for F7AUH4 as seed ortholog is 100%.
Bootstrap support for B3L4Q8 as seed ortholog is 100%.

Group of orthologs #1089. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.knowlesi:64

F7A7P7              	100.00%		B3L995              	100.00%
Bootstrap support for F7A7P7 as seed ortholog is 100%.
Bootstrap support for B3L995 as seed ortholog is 100%.

Group of orthologs #1090. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.knowlesi:64

H2XQF1              	100.00%		B3KZP6              	100.00%
Bootstrap support for H2XQF1 as seed ortholog is 100%.
Bootstrap support for B3KZP6 as seed ortholog is 100%.

Group of orthologs #1091. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.knowlesi:63

F6Y3J4              	100.00%		B3L5D6              	100.00%
F7AXY8              	5.49%		
F6YVW8              	5.27%		
Bootstrap support for F6Y3J4 as seed ortholog is 100%.
Bootstrap support for B3L5D6 as seed ortholog is 100%.

Group of orthologs #1092. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.knowlesi:63

F6VKW3              	100.00%		B3LA32              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for B3LA32 as seed ortholog is 100%.

Group of orthologs #1093. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.knowlesi:63

F6Z7A9              	100.00%		B3L420              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for B3L420 as seed ortholog is 100%.

Group of orthologs #1094. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.knowlesi:63

H2XTT8              	100.00%		B3L6A9              	100.00%
Bootstrap support for H2XTT8 as seed ortholog is 78%.
Bootstrap support for B3L6A9 as seed ortholog is 100%.

Group of orthologs #1095. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:62

F6UNS0              	100.00%		B3L3J2              	100.00%
Bootstrap support for F6UNS0 as seed ortholog is 100%.
Bootstrap support for B3L3J2 as seed ortholog is 100%.

Group of orthologs #1096. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:62

F6XIG6              	100.00%		B3L0U6              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for B3L0U6 as seed ortholog is 100%.

Group of orthologs #1097. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:62

F6XL41              	100.00%		B3L481              	100.00%
Bootstrap support for F6XL41 as seed ortholog is 100%.
Bootstrap support for B3L481 as seed ortholog is 100%.

Group of orthologs #1098. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.knowlesi:62

F6W4Z8              	100.00%		B3L9L7              	100.00%
Bootstrap support for F6W4Z8 as seed ortholog is 73%.
Alternative seed ortholog is H2Y1V3 (13 bits away from this cluster)
Bootstrap support for B3L9L7 as seed ortholog is 100%.

Group of orthologs #1099. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:62

H2XJL7              	100.00%		B3L3P7              	100.00%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for B3L3P7 as seed ortholog is 100%.

Group of orthologs #1100. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:62

H2Y1B5              	100.00%		B3L5A8              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for B3L5A8 as seed ortholog is 100%.

Group of orthologs #1101. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.knowlesi:62

H2Y1S7              	100.00%		B3L869              	100.00%
Bootstrap support for H2Y1S7 as seed ortholog is 48%.
Alternative seed ortholog is F7AZA6 (1 bits away from this cluster)
Bootstrap support for B3L869 as seed ortholog is 100%.

Group of orthologs #1102. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.knowlesi:62

H2XWG7              	100.00%		B3LDC0              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for B3LDC0 as seed ortholog is 100%.

Group of orthologs #1103. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:61

F6QN34              	100.00%		B3L0Q7              	100.00%
F6Y9W3              	38.37%		
F6VKE2              	36.61%		
F6VSC2              	36.35%		
H2XL32              	36.17%		
F6UPM0              	35.65%		
H2XV07              	34.50%		
F6XTN6              	34.24%		
F6V5B4              	34.06%		
F6XQ30              	33.89%		
F6XZF9              	32.84%		
F6YPZ5              	32.48%		
F6SIE8              	32.48%		
F6YPI9              	32.05%		
F6SGT8              	31.34%		
F7AFY1              	28.97%		
F6QSQ2              	28.27%		
F6WBL5              	26.95%		
F6TM37              	26.78%		
F7BDN3              	24.23%		
F6WX88              	21.95%		
F6TAM4              	19.84%		
F7AZV4              	19.32%		
F6X9M4              	18.53%		
F6SUX9              	12.64%		
F6T8C2              	12.20%		
Bootstrap support for F6QN34 as seed ortholog is 100%.
Bootstrap support for B3L0Q7 as seed ortholog is 100%.

Group of orthologs #1104. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:61

F6Q3E6              	100.00%		B3LBK3              	100.00%
                    	       		B3LAB6              	5.98%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for B3LBK3 as seed ortholog is 100%.

Group of orthologs #1105. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:61

F6W9C9              	100.00%		B3L5X8              	100.00%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for B3L5X8 as seed ortholog is 100%.

Group of orthologs #1106. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.knowlesi:61

H2XP72              	100.00%		B3L8S6              	100.00%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for B3L8S6 as seed ortholog is 100%.

Group of orthologs #1107. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.knowlesi:60

F6ZCN2              	100.00%		B3L0Q1              	100.00%
H2XWF3              	46.95%		B3L2T0              	13.94%
F6ZST9              	11.35%		
H2XV23              	10.07%		
F6T0V1              	9.50%		
F7AXQ6              	9.36%		
H2XVY9              	9.36%		
F6R5Y6              	7.80%		
F6TL82              	7.09%		
H2XMT1              	5.25%		
Bootstrap support for F6ZCN2 as seed ortholog is 100%.
Bootstrap support for B3L0Q1 as seed ortholog is 100%.

Group of orthologs #1108. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.knowlesi:60

F6V9P3              	100.00%		B3L9Q2              	100.00%
Bootstrap support for F6V9P3 as seed ortholog is 100%.
Bootstrap support for B3L9Q2 as seed ortholog is 100%.

Group of orthologs #1109. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.knowlesi:60

F7B4X6              	100.00%		B3KZ62              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for B3KZ62 as seed ortholog is 100%.

Group of orthologs #1110. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:59

F6RGQ1              	100.00%		B3L0N3              	100.00%
Bootstrap support for F6RGQ1 as seed ortholog is 100%.
Bootstrap support for B3L0N3 as seed ortholog is 100%.

Group of orthologs #1111. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:59

F6ZA91              	100.00%		B3L234              	100.00%
Bootstrap support for F6ZA91 as seed ortholog is 100%.
Bootstrap support for B3L234 as seed ortholog is 100%.

Group of orthologs #1112. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:59

H2XPZ5              	100.00%		B3L218              	100.00%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for B3L218 as seed ortholog is 100%.

Group of orthologs #1113. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:59

H2XPJ3              	100.00%		B3L2U1              	100.00%
Bootstrap support for H2XPJ3 as seed ortholog is 100%.
Bootstrap support for B3L2U1 as seed ortholog is 100%.

Group of orthologs #1114. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.knowlesi:59

H2XRT6              	100.00%		B3L882              	100.00%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for B3L882 as seed ortholog is 100%.

Group of orthologs #1115. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.knowlesi:58

F6TDH1              	100.00%		B3L7D3              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for B3L7D3 as seed ortholog is 100%.

Group of orthologs #1116. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.knowlesi:57

F6YF53              	100.00%		B3LC22              	100.00%
H2XX28              	11.43%		
H2Y1H5              	8.21%		
F7B2N2              	7.14%		
Bootstrap support for F6YF53 as seed ortholog is 85%.
Bootstrap support for B3LC22 as seed ortholog is 100%.

Group of orthologs #1117. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.knowlesi:57

F6QZE9              	100.00%		B3KZL0              	100.00%
Bootstrap support for F6QZE9 as seed ortholog is 100%.
Bootstrap support for B3KZL0 as seed ortholog is 100%.

Group of orthologs #1118. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.knowlesi:57

F7B349              	100.00%		B3L034              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for B3L034 as seed ortholog is 100%.

Group of orthologs #1119. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.knowlesi:57

H2XJW9              	100.00%		B3L5K4              	100.00%
Bootstrap support for H2XJW9 as seed ortholog is 100%.
Bootstrap support for B3L5K4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.knowlesi:57

H2XVT6              	100.00%		B3L355              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for B3L355 as seed ortholog is 100%.

Group of orthologs #1121. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:56

F7AIM1              	100.00%		B3L4W7              	100.00%
Bootstrap support for F7AIM1 as seed ortholog is 100%.
Bootstrap support for B3L4W7 as seed ortholog is 100%.

Group of orthologs #1122. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:56

H2XL08              	100.00%		B3L3D3              	100.00%
Bootstrap support for H2XL08 as seed ortholog is 100%.
Bootstrap support for B3L3D3 as seed ortholog is 100%.

Group of orthologs #1123. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 P.knowlesi:56

F7AA36              	100.00%		B3LBV3              	100.00%
Bootstrap support for F7AA36 as seed ortholog is 62%.
Alternative seed ortholog is F6YBB2 (11 bits away from this cluster)
Bootstrap support for B3LBV3 as seed ortholog is 100%.

Group of orthologs #1124. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:56

F7AIB9              	100.00%		B3LBE6              	100.00%
Bootstrap support for F7AIB9 as seed ortholog is 100%.
Bootstrap support for B3LBE6 as seed ortholog is 100%.

Group of orthologs #1125. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:56

H2Y216              	100.00%		B3L2H6              	100.00%
Bootstrap support for H2Y216 as seed ortholog is 100%.
Bootstrap support for B3L2H6 as seed ortholog is 100%.

Group of orthologs #1126. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.knowlesi:56

H2Y008              	100.00%		B3L6W0              	100.00%
Bootstrap support for H2Y008 as seed ortholog is 100%.
Bootstrap support for B3L6W0 as seed ortholog is 100%.

Group of orthologs #1127. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:55

F6RTY1              	100.00%		B3L4R1              	100.00%
Bootstrap support for F6RTY1 as seed ortholog is 100%.
Bootstrap support for B3L4R1 as seed ortholog is 100%.

Group of orthologs #1128. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:55

F6SVM4              	100.00%		B3L493              	100.00%
Bootstrap support for F6SVM4 as seed ortholog is 100%.
Bootstrap support for B3L493 as seed ortholog is 100%.

Group of orthologs #1129. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:55

F6SAX1              	100.00%		B3L6F0              	100.00%
Bootstrap support for F6SAX1 as seed ortholog is 100%.
Bootstrap support for B3L6F0 as seed ortholog is 100%.

Group of orthologs #1130. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:55

F6XVG4              	100.00%		B3LA94              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for B3LA94 as seed ortholog is 100%.

Group of orthologs #1131. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.knowlesi:55

H2XZW2              	100.00%		B3LB73              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for B3LB73 as seed ortholog is 100%.

Group of orthologs #1132. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:54

F6PWR0              	100.00%		B3LC45              	100.00%
Bootstrap support for F6PWR0 as seed ortholog is 100%.
Bootstrap support for B3LC45 as seed ortholog is 100%.

Group of orthologs #1133. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:54

F7AF59              	100.00%		B3L1D9              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for B3L1D9 as seed ortholog is 100%.

Group of orthologs #1134. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:54

H2XJJ6              	100.00%		B3L173              	100.00%
Bootstrap support for H2XJJ6 as seed ortholog is 100%.
Bootstrap support for B3L173 as seed ortholog is 100%.

Group of orthologs #1135. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:54

H2XVM5              	100.00%		B3LCA9              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 100%.
Bootstrap support for B3LCA9 as seed ortholog is 100%.

Group of orthologs #1136. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.knowlesi:54

H2Y058              	100.00%		B3L9W2              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for B3L9W2 as seed ortholog is 100%.

Group of orthologs #1137. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.knowlesi:53

F7A9H5              	100.00%		B3LD21              	100.00%
H2XUF7              	17.89%		
Bootstrap support for F7A9H5 as seed ortholog is 100%.
Bootstrap support for B3LD21 as seed ortholog is 100%.

Group of orthologs #1138. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.knowlesi:53

F6XS68              	100.00%		B3LDB2              	100.00%
Bootstrap support for F6XS68 as seed ortholog is 100%.
Bootstrap support for B3LDB2 as seed ortholog is 100%.

Group of orthologs #1139. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

F7ARL3              	100.00%		B3L7F9              	100.00%
F6XKA8              	20.57%		B3L7G0              	23.24%
H2XS26              	6.42%		
Bootstrap support for F7ARL3 as seed ortholog is 100%.
Bootstrap support for B3L7F9 as seed ortholog is 100%.

Group of orthologs #1140. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

F6RRS1              	100.00%		B3L066              	100.00%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for B3L066 as seed ortholog is 100%.

Group of orthologs #1141. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

F6T120              	100.00%		B3LD18              	100.00%
Bootstrap support for F6T120 as seed ortholog is 100%.
Bootstrap support for B3LD18 as seed ortholog is 100%.

Group of orthologs #1142. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

F6YVG2              	100.00%		B3L269              	100.00%
Bootstrap support for F6YVG2 as seed ortholog is 100%.
Bootstrap support for B3L269 as seed ortholog is 100%.

Group of orthologs #1143. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

H2XSV0              	100.00%		B3L0G2              	100.00%
Bootstrap support for H2XSV0 as seed ortholog is 100%.
Bootstrap support for B3L0G2 as seed ortholog is 100%.

Group of orthologs #1144. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

H2XTG7              	100.00%		B3L8H2              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for B3L8H2 as seed ortholog is 100%.

Group of orthologs #1145. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.knowlesi:52

H2Y0B1              	100.00%		B3LAK1              	100.00%
Bootstrap support for H2Y0B1 as seed ortholog is 100%.
Bootstrap support for B3LAK1 as seed ortholog is 100%.

Group of orthologs #1146. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:51

F6R5Z4              	100.00%		B3L244              	100.00%
Bootstrap support for F6R5Z4 as seed ortholog is 100%.
Bootstrap support for B3L244 as seed ortholog is 100%.

Group of orthologs #1147. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:51

F6VLF4              	100.00%		B3LDB4              	100.00%
Bootstrap support for F6VLF4 as seed ortholog is 100%.
Bootstrap support for B3LDB4 as seed ortholog is 100%.

Group of orthologs #1148. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:1

F7ALL0              	100.00%		B3L638              	100.00%
Bootstrap support for F7ALL0 as seed ortholog is 100%.
Bootstrap support for B3L638 as seed ortholog is 54%.
Alternative seed ortholog is B3LA81 (1 bits away from this cluster)

Group of orthologs #1149. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.knowlesi:51

H2XZE6              	100.00%		B3L2I7              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for B3L2I7 as seed ortholog is 100%.

Group of orthologs #1150. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.knowlesi:50

Q1RL82              	100.00%		B3LBP3              	100.00%
Q4H329              	6.67%		
Bootstrap support for Q1RL82 as seed ortholog is 100%.
Bootstrap support for B3LBP3 as seed ortholog is 100%.

Group of orthologs #1151. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.knowlesi:50

F6R1Q7              	100.00%		B3L3K0              	100.00%
Bootstrap support for F6R1Q7 as seed ortholog is 100%.
Bootstrap support for B3L3K0 as seed ortholog is 100%.

Group of orthologs #1152. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.knowlesi:50

F6UU76              	100.00%		B3L0K9              	100.00%
Bootstrap support for F6UU76 as seed ortholog is 100%.
Bootstrap support for B3L0K9 as seed ortholog is 100%.

Group of orthologs #1153. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.knowlesi:50

H2XN89              	100.00%		B3L6F3              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for B3L6F3 as seed ortholog is 100%.

Group of orthologs #1154. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:49

H2Y3S3              	100.00%		B3LCT3              	100.00%
H2Y234              	34.33%		
Bootstrap support for H2Y3S3 as seed ortholog is 100%.
Bootstrap support for B3LCT3 as seed ortholog is 100%.

Group of orthologs #1155. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:49

F6WVC9              	100.00%		B3L8F3              	100.00%
Bootstrap support for F6WVC9 as seed ortholog is 100%.
Bootstrap support for B3L8F3 as seed ortholog is 100%.

Group of orthologs #1156. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:49

F6ZVT2              	100.00%		B3L4F0              	100.00%
Bootstrap support for F6ZVT2 as seed ortholog is 100%.
Bootstrap support for B3L4F0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:49

H2XYK0              	100.00%		B3L3P0              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for B3L3P0 as seed ortholog is 100%.

Group of orthologs #1158. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.knowlesi:49

H2XWM7              	100.00%		B3L6T3              	100.00%
Bootstrap support for H2XWM7 as seed ortholog is 100%.
Bootstrap support for B3L6T3 as seed ortholog is 100%.

Group of orthologs #1159. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.knowlesi:48

F6WJ25              	100.00%		B3L7N4              	100.00%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for B3L7N4 as seed ortholog is 100%.

Group of orthologs #1160. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.knowlesi:48

H2Y1B1              	100.00%		B3L6D6              	100.00%
Bootstrap support for H2Y1B1 as seed ortholog is 100%.
Bootstrap support for B3L6D6 as seed ortholog is 100%.

Group of orthologs #1161. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.knowlesi:47

H2XR92              	100.00%		B3LAR5              	100.00%
H2XNE6              	56.69%		
F6YNR2              	26.06%		
F6S021              	23.94%		
Bootstrap support for H2XR92 as seed ortholog is 100%.
Bootstrap support for B3LAR5 as seed ortholog is 100%.

Group of orthologs #1162. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.knowlesi:47

F6T5I8              	100.00%		B3LAG0              	100.00%
F6QAV6              	6.90%		
Bootstrap support for F6T5I8 as seed ortholog is 100%.
Bootstrap support for B3LAG0 as seed ortholog is 100%.

Group of orthologs #1163. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.knowlesi:46

F6TV26              	100.00%		B3L5S8              	100.00%
Bootstrap support for F6TV26 as seed ortholog is 100%.
Bootstrap support for B3L5S8 as seed ortholog is 100%.

Group of orthologs #1164. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.knowlesi:45

F6RUW6              	100.00%		B3LCJ8              	100.00%
Bootstrap support for F6RUW6 as seed ortholog is 100%.
Bootstrap support for B3LCJ8 as seed ortholog is 100%.

Group of orthologs #1165. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.knowlesi:43

F6Z1H7              	100.00%		B3L583              	100.00%
Bootstrap support for F6Z1H7 as seed ortholog is 100%.
Bootstrap support for B3L583 as seed ortholog is 100%.

Group of orthologs #1166. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.knowlesi:41

H2XYL6              	100.00%		B3KZ05              	100.00%
F6W9F7              	21.34%		
F6YLR6              	7.62%		
Bootstrap support for H2XYL6 as seed ortholog is 100%.
Bootstrap support for B3KZ05 as seed ortholog is 100%.

Group of orthologs #1167. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.knowlesi:40

H2Y0K5              	100.00%		B3L721              	100.00%
F6Z145              	28.98%		
Bootstrap support for H2Y0K5 as seed ortholog is 100%.
Bootstrap support for B3L721 as seed ortholog is 100%.

Group of orthologs #1168. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.knowlesi:40

H2XSG2              	100.00%		B3L8Z1              	100.00%
Bootstrap support for H2XSG2 as seed ortholog is 100%.
Bootstrap support for B3L8Z1 as seed ortholog is 100%.