###################################
681 groups of orthologs
954 in-paralogs from C.intestinalis
694 in-paralogs from E.cuniculi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1435 bits
Score difference with first non-orthologous sequence - C.intestinalis:1435 E.cuniculi:746

F6SUC2              	100.00%		Q8SSC4              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for Q8SSC4 as seed ortholog is 100%.

Group of orthologs #2. Best score 1332 bits
Score difference with first non-orthologous sequence - C.intestinalis:1332 E.cuniculi:652

F6QR00              	100.00%		Q8SR75              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for Q8SR75 as seed ortholog is 100%.

Group of orthologs #3. Best score 1126 bits
Score difference with first non-orthologous sequence - C.intestinalis:1126 E.cuniculi:1126

F7AKG2              	100.00%		Q8SS63              	100.00%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for Q8SS63 as seed ortholog is 100%.

Group of orthologs #4. Best score 901 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 E.cuniculi:626

F6VLN4              	100.00%		Q8SSJ5              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for Q8SSJ5 as seed ortholog is 100%.

Group of orthologs #5. Best score 847 bits
Score difference with first non-orthologous sequence - C.intestinalis:847 E.cuniculi:847

F6WUQ7              	100.00%		Q8SR23              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for Q8SR23 as seed ortholog is 100%.

Group of orthologs #6. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 E.cuniculi:841

H2XZY7              	100.00%		Q8SS35              	100.00%
H2Y265              	16.23%		
H2XWY7              	16.13%		
F7AY44              	15.83%		
Bootstrap support for H2XZY7 as seed ortholog is 100%.
Bootstrap support for Q8SS35 as seed ortholog is 100%.

Group of orthologs #7. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 E.cuniculi:837

F7AKQ3              	100.00%		Q8SQV6              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for Q8SQV6 as seed ortholog is 100%.

Group of orthologs #8. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 E.cuniculi:783

H2XZZ5              	100.00%		Q8SQL4              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for Q8SQL4 as seed ortholog is 100%.

Group of orthologs #9. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:782 E.cuniculi:604

F6WCR1              	100.00%		Q8SQP5              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for Q8SQP5 as seed ortholog is 100%.

Group of orthologs #10. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 E.cuniculi:757

L7N0T3              	100.00%		Q8SS99              	100.00%
F6SYL0              	94.23%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for Q8SS99 as seed ortholog is 100%.

Group of orthologs #11. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 E.cuniculi:752

H2XJT5              	100.00%		Q8SQU9              	100.00%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for Q8SQU9 as seed ortholog is 100%.

Group of orthologs #12. Best score 750 bits
Score difference with first non-orthologous sequence - C.intestinalis:750 E.cuniculi:750

F6Y1Q3              	100.00%		Q8SUP3              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for Q8SUP3 as seed ortholog is 100%.

Group of orthologs #13. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 E.cuniculi:712

F7A8C2              	100.00%		Q8SR34              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for Q8SR34 as seed ortholog is 100%.

Group of orthologs #14. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 E.cuniculi:693

F6XZ43              	100.00%		Q8SU15              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for Q8SU15 as seed ortholog is 100%.

Group of orthologs #15. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 E.cuniculi:681

F6Z5U4              	100.00%		Q8SS39              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for Q8SS39 as seed ortholog is 100%.

Group of orthologs #16. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 E.cuniculi:560

F6XKY1              	100.00%		Q8SQT7              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for Q8SQT7 as seed ortholog is 100%.

Group of orthologs #17. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 E.cuniculi:670

F6QB29              	100.00%		Q8SRI6              	100.00%
F7B0Q2              	100.00%		
F6SJ24              	94.90%		
F6XCZ8              	88.63%		
F6QB20              	85.88%		
L7N0T5              	84.71%		
F6UV18              	34.12%		
Bootstrap support for F6QB29 as seed ortholog is 100%.
Bootstrap support for F7B0Q2 as seed ortholog is 100%.
Bootstrap support for Q8SRI6 as seed ortholog is 100%.

Group of orthologs #18. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 E.cuniculi:667

F6VC80              	100.00%		Q8SRI2              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for Q8SRI2 as seed ortholog is 100%.

Group of orthologs #19. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 E.cuniculi:238

F6S181              	100.00%		Q8SSB7              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for Q8SSB7 as seed ortholog is 99%.

Group of orthologs #20. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 E.cuniculi:210

Q4H2Q8              	100.00%		Q8SUC5              	100.00%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for Q8SUC5 as seed ortholog is 99%.

Group of orthologs #21. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 E.cuniculi:618

F6TML4              	100.00%		Q8SSK1              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for Q8SSK1 as seed ortholog is 100%.

Group of orthologs #22. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 E.cuniculi:540

A2SY09              	100.00%		Q8SWN8              	100.00%
F6SCP4              	83.92%		
F6QBJ1              	71.33%		
L7N0T1              	68.53%		
F6T8C7              	67.83%		
F6SDC9              	67.83%		
F6Q662              	45.45%		
F6SC57              	39.16%		
F6R0S4              	32.87%		
Bootstrap support for A2SY09 as seed ortholog is 100%.
Bootstrap support for Q8SWN8 as seed ortholog is 100%.

Group of orthologs #23. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 E.cuniculi:377

H2XU53              	100.00%		O96772              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for O96772 as seed ortholog is 100%.

Group of orthologs #24. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 E.cuniculi:595

F6SI05              	100.00%		Q8SRH2              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for Q8SRH2 as seed ortholog is 100%.

Group of orthologs #25. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 E.cuniculi:582

F6PZ06              	100.00%		Q8SS82              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for Q8SS82 as seed ortholog is 100%.

Group of orthologs #26. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 E.cuniculi:565

F6U4L6              	100.00%		Q8SS19              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for Q8SS19 as seed ortholog is 100%.

Group of orthologs #27. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 E.cuniculi:560

F6U4V1              	100.00%		Q8SS94              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for Q8SS94 as seed ortholog is 100%.

Group of orthologs #28. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 E.cuniculi:361

F6THL0              	100.00%		Q8SSE5              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for Q8SSE5 as seed ortholog is 100%.

Group of orthologs #29. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 E.cuniculi:551

F7BHP4              	100.00%		Q8SQK0              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for Q8SQK0 as seed ortholog is 100%.

Group of orthologs #30. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 E.cuniculi:548

F6QZB5              	100.00%		Q8SUC3              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for Q8SUC3 as seed ortholog is 100%.

Group of orthologs #31. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 E.cuniculi:548

F6W785              	100.00%		Q8SUE4              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for Q8SUE4 as seed ortholog is 100%.

Group of orthologs #32. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 E.cuniculi:536

H2Y1Z9              	100.00%		Q8SSD4              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for Q8SSD4 as seed ortholog is 100%.

Group of orthologs #33. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 E.cuniculi:533

F6PJX3              	100.00%		Q8SS27              	100.00%
Bootstrap support for F6PJX3 as seed ortholog is 63%.
Alternative seed ortholog is F6Q9K0 (25 bits away from this cluster)
Bootstrap support for Q8SS27 as seed ortholog is 100%.

Group of orthologs #34. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 E.cuniculi:530

F6T9M1              	100.00%		Q8SQI9              	100.00%
Bootstrap support for F6T9M1 as seed ortholog is 100%.
Bootstrap support for Q8SQI9 as seed ortholog is 100%.

Group of orthologs #35. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 E.cuniculi:372

F6YTL6              	100.00%		Q8SRH0              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for Q8SRH0 as seed ortholog is 100%.

Group of orthologs #36. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 E.cuniculi:428

F6QX34              	100.00%		Q8SRP9              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for Q8SRP9 as seed ortholog is 100%.

Group of orthologs #37. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 E.cuniculi:525

F6Y4K6              	100.00%		Q8SSI1              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for Q8SSI1 as seed ortholog is 100%.

Group of orthologs #38. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 E.cuniculi:519

F6XJ08              	100.00%		Q8SS56              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for Q8SS56 as seed ortholog is 100%.

Group of orthologs #39. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 E.cuniculi:181

F6YDI9              	100.00%		Q8SS80              	100.00%
F6RAB3              	6.74%		
Bootstrap support for F6YDI9 as seed ortholog is 100%.
Bootstrap support for Q8SS80 as seed ortholog is 100%.

Group of orthologs #40. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 E.cuniculi:430

F6UWX3              	100.00%		Q8SRM0              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for Q8SRM0 as seed ortholog is 100%.

Group of orthologs #41. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 E.cuniculi:308

F6RKM9              	100.00%		Q8SRX5              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for Q8SRX5 as seed ortholog is 100%.

Group of orthologs #42. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 E.cuniculi:491

F6W1L1              	100.00%		Q8SRZ1              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for Q8SRZ1 as seed ortholog is 100%.

Group of orthologs #43. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 E.cuniculi:346

F6Z4G6              	100.00%		Q8SRF0              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for Q8SRF0 as seed ortholog is 100%.

Group of orthologs #44. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 E.cuniculi:198

F7ADN1              	100.00%		Q8SRK4              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 99%.
Bootstrap support for Q8SRK4 as seed ortholog is 99%.

Group of orthologs #45. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 E.cuniculi:485

F6Q9P9              	100.00%		Q8SQZ6              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for Q8SQZ6 as seed ortholog is 100%.

Group of orthologs #46. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 E.cuniculi:254

F6W8I3              	100.00%		Q8SSB1              	100.00%
F6XCH5              	43.05%		
F6SXM4              	37.48%		
F7BHA0              	27.33%		
Bootstrap support for F6W8I3 as seed ortholog is 100%.
Bootstrap support for Q8SSB1 as seed ortholog is 100%.

Group of orthologs #47. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 E.cuniculi:323

F7BA18              	100.00%		Q8SRS4              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for Q8SRS4 as seed ortholog is 100%.

Group of orthologs #48. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 E.cuniculi:481

F6YD90              	100.00%		Q8SRS8              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for Q8SRS8 as seed ortholog is 100%.

Group of orthologs #49. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 E.cuniculi:481

F6Y8C3              	100.00%		Q8SUH2              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for Q8SUH2 as seed ortholog is 100%.

Group of orthologs #50. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 E.cuniculi:480

H2XJT1              	100.00%		Q8SU86              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for Q8SU86 as seed ortholog is 100%.

Group of orthologs #51. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 E.cuniculi:422

F6XKP0              	100.00%		Q8SR13              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for Q8SR13 as seed ortholog is 100%.

Group of orthologs #52. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 E.cuniculi:381

H2XVY7              	100.00%		Q8SSC9              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for Q8SSC9 as seed ortholog is 100%.

Group of orthologs #53. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 E.cuniculi:228

F6Y1K6              	100.00%		Q8SQX8              	100.00%
F6Q5E4              	81.19%		
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for Q8SQX8 as seed ortholog is 100%.

Group of orthologs #54. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 E.cuniculi:466

F6UF05              	100.00%		Q8SRG9              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for Q8SRG9 as seed ortholog is 100%.

Group of orthologs #55. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 E.cuniculi:460

H2XYN5              	100.00%		Q8SRZ9              	100.00%
F7B0S6              	19.21%		
Bootstrap support for H2XYN5 as seed ortholog is 99%.
Bootstrap support for Q8SRZ9 as seed ortholog is 100%.

Group of orthologs #56. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 E.cuniculi:459

H2XQX5              	100.00%		Q8SQW5              	100.00%
Bootstrap support for H2XQX5 as seed ortholog is 100%.
Bootstrap support for Q8SQW5 as seed ortholog is 100%.

Group of orthologs #57. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 E.cuniculi:458

F6YFY0              	100.00%		O96719              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for O96719 as seed ortholog is 100%.

Group of orthologs #58. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 E.cuniculi:262

F7AUJ3              	100.00%		Q8SQL8              	100.00%
Bootstrap support for F7AUJ3 as seed ortholog is 100%.
Bootstrap support for Q8SQL8 as seed ortholog is 100%.

Group of orthologs #59. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 E.cuniculi:453

H2XQK9              	100.00%		Q8SR02              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for Q8SR02 as seed ortholog is 100%.

Group of orthologs #60. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 E.cuniculi:228

F6UHH9              	100.00%		Q8SRB2              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 99%.
Bootstrap support for Q8SRB2 as seed ortholog is 100%.

Group of orthologs #61. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 E.cuniculi:42

F6YKR9              	100.00%		Q8SQQ2              	100.00%
F6UYA6              	13.85%		
F7BBN7              	5.33%		
Bootstrap support for F6YKR9 as seed ortholog is 98%.
Bootstrap support for Q8SQQ2 as seed ortholog is 81%.

Group of orthologs #62. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 E.cuniculi:448

F6PST3              	100.00%		Q8SRZ6              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for Q8SRZ6 as seed ortholog is 100%.

Group of orthologs #63. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 E.cuniculi:443

F6XTJ3              	100.00%		Q8SVJ8              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for Q8SVJ8 as seed ortholog is 100%.

Group of orthologs #64. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 E.cuniculi:169

F6VAS2              	100.00%		Q8SS50              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 92%.
Bootstrap support for Q8SS50 as seed ortholog is 100%.

Group of orthologs #65. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 E.cuniculi:440

F6R8X1              	100.00%		Q8STP2              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for Q8STP2 as seed ortholog is 100%.

Group of orthologs #66. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 E.cuniculi:344

F7BEF3              	100.00%		Q8SQP2              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for Q8SQP2 as seed ortholog is 100%.

Group of orthologs #67. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 E.cuniculi:438

H2XJF4              	100.00%		O62585              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for O62585 as seed ortholog is 100%.

Group of orthologs #68. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 E.cuniculi:437

H2XVK2              	100.00%		Q8SRX7              	100.00%
H2XQD5              	58.10%		
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for Q8SRX7 as seed ortholog is 100%.

Group of orthologs #69. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 E.cuniculi:330

F6W7I3              	100.00%		Q8SR76              	100.00%
F6W7K5              	84.29%		
Bootstrap support for F6W7I3 as seed ortholog is 100%.
Bootstrap support for Q8SR76 as seed ortholog is 100%.

Group of orthologs #70. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 E.cuniculi:431

F6XY03              	100.00%		Q8SSE8              	100.00%
F6YNJ1              	6.30%		
Bootstrap support for F6XY03 as seed ortholog is 99%.
Bootstrap support for Q8SSE8 as seed ortholog is 100%.

Group of orthologs #71. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 E.cuniculi:429

F6ZBB5              	100.00%		Q8SR40              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for Q8SR40 as seed ortholog is 100%.

Group of orthologs #72. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 E.cuniculi:428

F6TAK8              	100.00%		Q8SRR2              	100.00%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for Q8SRR2 as seed ortholog is 100%.

Group of orthologs #73. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 E.cuniculi:423

F6VBU5              	100.00%		Q8SS36              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for Q8SS36 as seed ortholog is 100%.

Group of orthologs #74. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 E.cuniculi:423

H2XXZ3              	100.00%		Q8SQP6              	100.00%
Bootstrap support for H2XXZ3 as seed ortholog is 99%.
Bootstrap support for Q8SQP6 as seed ortholog is 100%.

Group of orthologs #75. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 E.cuniculi:422

F6ZM86              	100.00%		Q8SQQ4              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for Q8SQQ4 as seed ortholog is 100%.

Group of orthologs #76. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 E.cuniculi:414

H2XQE4              	100.00%		Q8SQQ3              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for Q8SQQ3 as seed ortholog is 100%.

Group of orthologs #77. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 E.cuniculi:185

F6PMK8              	100.00%		Q8SR00              	100.00%
F6VF77              	5.25%		
Bootstrap support for F6PMK8 as seed ortholog is 100%.
Bootstrap support for Q8SR00 as seed ortholog is 99%.

Group of orthologs #78. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 E.cuniculi:410

F6PYU7              	100.00%		Q8SSA3              	100.00%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for Q8SSA3 as seed ortholog is 100%.

Group of orthologs #79. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 E.cuniculi:167

F6S399              	100.00%		Q8SR10              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for Q8SR10 as seed ortholog is 99%.

Group of orthologs #80. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 E.cuniculi:410

F6YQL6              	100.00%		Q8SWJ2              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for Q8SWJ2 as seed ortholog is 100%.

Group of orthologs #81. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 E.cuniculi:409

H2XQX6              	100.00%		Q8SRD2              	100.00%
Bootstrap support for H2XQX6 as seed ortholog is 100%.
Bootstrap support for Q8SRD2 as seed ortholog is 100%.

Group of orthologs #82. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 E.cuniculi:254

F6W6L5              	100.00%		Q8SS42              	100.00%
Bootstrap support for F6W6L5 as seed ortholog is 100%.
Bootstrap support for Q8SS42 as seed ortholog is 100%.

Group of orthologs #83. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 E.cuniculi:406

H2XKD5              	100.00%		Q8SQX2              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for Q8SQX2 as seed ortholog is 100%.

Group of orthologs #84. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 E.cuniculi:402

F6SH00              	100.00%		Q8SRQ0              	100.00%
H2XS32              	13.95%		
F6ZHQ8              	12.30%		
F6VSD0              	5.66%		
Bootstrap support for F6SH00 as seed ortholog is 100%.
Bootstrap support for Q8SRQ0 as seed ortholog is 100%.

Group of orthologs #85. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 E.cuniculi:396

F6U2M6              	100.00%		Q8SRW0              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for Q8SRW0 as seed ortholog is 100%.

Group of orthologs #86. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 E.cuniculi:392

F6V5U6              	100.00%		Q8SQI7              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for Q8SQI7 as seed ortholog is 100%.

Group of orthologs #87. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 E.cuniculi:388

H2XL55              	100.00%		Q8SW47              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 98%.
Bootstrap support for Q8SW47 as seed ortholog is 100%.

Group of orthologs #88. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 E.cuniculi:291

F7B8G8              	100.00%		Q8SR53              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for Q8SR53 as seed ortholog is 100%.

Group of orthologs #89. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 E.cuniculi:380

F6RHA1              	100.00%		Q8SU27              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for Q8SU27 as seed ortholog is 100%.

Group of orthologs #90. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 E.cuniculi:379

F6YKX8              	100.00%		Q8SQI3              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for Q8SQI3 as seed ortholog is 100%.

Group of orthologs #91. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 E.cuniculi:377

F6YUT1              	100.00%		Q8SQI6              	100.00%
                    	       		Q8SRG3              	99.41%
Bootstrap support for F6YUT1 as seed ortholog is 100%.
Bootstrap support for Q8SQI6 as seed ortholog is 100%.

Group of orthologs #92. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:375

F6U7Z2              	100.00%		Q8SQV9              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 99%.
Bootstrap support for Q8SQV9 as seed ortholog is 100%.

Group of orthologs #93. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 E.cuniculi:372

F6VVR6              	100.00%		Q8STM3              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for Q8STM3 as seed ortholog is 100%.

Group of orthologs #94. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 E.cuniculi:370

H2XJK0              	100.00%		Q8SSG2              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for Q8SSG2 as seed ortholog is 100%.

Group of orthologs #95. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 E.cuniculi:360

F6VYC6              	100.00%		Q8SRV7              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for Q8SRV7 as seed ortholog is 100%.

Group of orthologs #96. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 E.cuniculi:359

F6QI37              	100.00%		Q8SRA4              	100.00%
Bootstrap support for F6QI37 as seed ortholog is 100%.
Bootstrap support for Q8SRA4 as seed ortholog is 100%.

Group of orthologs #97. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 E.cuniculi:152

F6YYE4              	100.00%		Q8SSJ9              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 99%.
Bootstrap support for Q8SSJ9 as seed ortholog is 100%.

Group of orthologs #98. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 E.cuniculi:353

F6TGH1              	100.00%		Q8SRV5              	100.00%
F7AVY6              	6.77%		
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for Q8SRV5 as seed ortholog is 100%.

Group of orthologs #99. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 E.cuniculi:284

F6VFC5              	100.00%		Q8SQR0              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for Q8SQR0 as seed ortholog is 100%.

Group of orthologs #100. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 E.cuniculi:350

F6X4W9              	100.00%		Q8SSC5              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for Q8SSC5 as seed ortholog is 100%.

Group of orthologs #101. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 E.cuniculi:162

F6WMK2              	100.00%		Q8SQX1              	100.00%
Bootstrap support for F6WMK2 as seed ortholog is 100%.
Bootstrap support for Q8SQX1 as seed ortholog is 99%.

Group of orthologs #102. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 E.cuniculi:157

F7B898              	100.00%		Q8SQK9              	100.00%
Bootstrap support for F7B898 as seed ortholog is 99%.
Bootstrap support for Q8SQK9 as seed ortholog is 99%.

Group of orthologs #103. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 E.cuniculi:346

F6R356              	100.00%		Q8SQK3              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for Q8SQK3 as seed ortholog is 100%.

Group of orthologs #104. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 E.cuniculi:345

F6ZY44              	100.00%		Q8SRR3              	100.00%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for Q8SRR3 as seed ortholog is 100%.

Group of orthologs #105. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 E.cuniculi:250

F6XMA0              	100.00%		Q8SSH3              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 99%.
Bootstrap support for Q8SSH3 as seed ortholog is 100%.

Group of orthologs #106. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 E.cuniculi:344

H2XLP3              	100.00%		Q8SQY3              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for Q8SQY3 as seed ortholog is 100%.

Group of orthologs #107. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 E.cuniculi:188

F6ZN89              	100.00%		Q8SRQ7              	100.00%
Bootstrap support for F6ZN89 as seed ortholog is 99%.
Bootstrap support for Q8SRQ7 as seed ortholog is 99%.

Group of orthologs #108. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 E.cuniculi:343

H2XXZ7              	100.00%		Q8SRJ8              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for Q8SRJ8 as seed ortholog is 100%.

Group of orthologs #109. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 E.cuniculi:340

F6QI83              	100.00%		Q8SS91              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for Q8SS91 as seed ortholog is 100%.

Group of orthologs #110. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 E.cuniculi:339

F6W1H2              	100.00%		Q8SSJ2              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for Q8SSJ2 as seed ortholog is 100%.

Group of orthologs #111. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 E.cuniculi:338

F7AYB9              	100.00%		Q8SRQ8              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for Q8SRQ8 as seed ortholog is 100%.

Group of orthologs #112. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 E.cuniculi:334

F6WAD4              	100.00%		Q8SS79              	100.00%
Bootstrap support for F6WAD4 as seed ortholog is 99%.
Bootstrap support for Q8SS79 as seed ortholog is 100%.

Group of orthologs #113. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 E.cuniculi:332

F7A7C3              	100.00%		Q8SW96              	100.00%
Bootstrap support for F7A7C3 as seed ortholog is 100%.
Bootstrap support for Q8SW96 as seed ortholog is 100%.

Group of orthologs #114. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 E.cuniculi:273

F6VXL3              	100.00%		Q8SRI7              	100.00%
H2Y2K5              	100.00%		
Bootstrap support for F6VXL3 as seed ortholog is 92%.
Bootstrap support for H2Y2K5 as seed ortholog is 93%.
Bootstrap support for Q8SRI7 as seed ortholog is 100%.

Group of orthologs #115. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 E.cuniculi:159

F7AA42              	100.00%		Q8SR63              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 99%.
Bootstrap support for Q8SR63 as seed ortholog is 99%.

Group of orthologs #116. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 E.cuniculi:326

H2XUE4              	100.00%		Q8SS48              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for Q8SS48 as seed ortholog is 100%.

Group of orthologs #117. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 E.cuniculi:325

F6UQ90              	100.00%		Q8SQK8              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 99%.
Bootstrap support for Q8SQK8 as seed ortholog is 100%.

Group of orthologs #118. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 E.cuniculi:325

F7B580              	100.00%		Q8SS40              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for Q8SS40 as seed ortholog is 100%.

Group of orthologs #119. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 E.cuniculi:324

F6X7X8              	100.00%		Q8SRN3              	100.00%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for Q8SRN3 as seed ortholog is 100%.

Group of orthologs #120. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 E.cuniculi:324

F7BBJ9              	100.00%		Q8SS26              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 99%.
Bootstrap support for Q8SS26 as seed ortholog is 100%.

Group of orthologs #121. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 E.cuniculi:318

H2XZM3              	100.00%		Q8SW15              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for Q8SW15 as seed ortholog is 100%.

Group of orthologs #122. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 E.cuniculi:316

F7A5J2              	100.00%		Q8SR42              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for Q8SR42 as seed ortholog is 100%.

Group of orthologs #123. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 E.cuniculi:213

Q8T3S5              	100.00%		Q8SRU0              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for Q8SRU0 as seed ortholog is 100%.

Group of orthologs #124. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 E.cuniculi:314

H2Y2G1              	100.00%		Q8SU51              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for Q8SU51 as seed ortholog is 100%.

Group of orthologs #125. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 E.cuniculi:313

H2XSM0              	100.00%		Q8SQN6              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 100%.
Bootstrap support for Q8SQN6 as seed ortholog is 100%.

Group of orthologs #126. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 E.cuniculi:312

F6XZ93              	100.00%		Q8SUA4              	100.00%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for Q8SUA4 as seed ortholog is 100%.

Group of orthologs #127. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 E.cuniculi:309

F6SLC8              	100.00%		Q8SRN9              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for Q8SRN9 as seed ortholog is 100%.

Group of orthologs #128. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 E.cuniculi:309

F6VZF6              	100.00%		Q8SUZ5              	100.00%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for Q8SUZ5 as seed ortholog is 100%.

Group of orthologs #129. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 E.cuniculi:309

F6Z8I3              	100.00%		Q8SRK1              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for Q8SRK1 as seed ortholog is 100%.

Group of orthologs #130. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 E.cuniculi:307

F6ST44              	100.00%		Q8SS31              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 56%.
Alternative seed ortholog is F6WDL0 (11 bits away from this cluster)
Bootstrap support for Q8SS31 as seed ortholog is 100%.

Group of orthologs #131. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 E.cuniculi:301

F6UXR3              	100.00%		Q8SS65              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for Q8SS65 as seed ortholog is 100%.

Group of orthologs #132. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 E.cuniculi:299

F6XP34              	100.00%		Q8SQM4              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for Q8SQM4 as seed ortholog is 100%.

Group of orthologs #133. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 E.cuniculi:299

F6ZP25              	100.00%		Q8SSL7              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for Q8SSL7 as seed ortholog is 100%.

Group of orthologs #134. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 E.cuniculi:175

H2XJZ4              	100.00%		Q8SR01              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 99%.
Bootstrap support for Q8SR01 as seed ortholog is 100%.

Group of orthologs #135. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 E.cuniculi:297

F6R6F3              	100.00%		Q8SSJ0              	100.00%
Bootstrap support for F6R6F3 as seed ortholog is 100%.
Bootstrap support for Q8SSJ0 as seed ortholog is 100%.

Group of orthologs #136. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 E.cuniculi:297

F6WA81              	100.00%		Q8SQV3              	100.00%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for Q8SQV3 as seed ortholog is 100%.

Group of orthologs #137. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 E.cuniculi:296

F6X2D1              	100.00%		Q8SRH4              	100.00%
Bootstrap support for F6X2D1 as seed ortholog is 99%.
Bootstrap support for Q8SRH4 as seed ortholog is 100%.

Group of orthologs #138. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 E.cuniculi:131

F6WUJ1              	100.00%		Q8SQJ6              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for Q8SQJ6 as seed ortholog is 100%.

Group of orthologs #139. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 E.cuniculi:287

H2XZ08              	100.00%		Q8SS29              	100.00%
F6ZIF2              	75.97%		
H2XSX9              	75.66%		
F6ZID9              	72.87%		
Bootstrap support for H2XZ08 as seed ortholog is 99%.
Bootstrap support for Q8SS29 as seed ortholog is 100%.

Group of orthologs #140. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 E.cuniculi:230

F6XWW8              	100.00%		Q8SUV4              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 93%.
Bootstrap support for Q8SUV4 as seed ortholog is 100%.

Group of orthologs #141. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 E.cuniculi:286

H2XWZ0              	100.00%		Q8SR55              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for Q8SR55 as seed ortholog is 100%.

Group of orthologs #142. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 E.cuniculi:284

F6SI15              	100.00%		Q8SR47              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 99%.
Bootstrap support for Q8SR47 as seed ortholog is 100%.

Group of orthologs #143. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 E.cuniculi:284

F6TD07              	100.00%		Q8SQN2              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for Q8SQN2 as seed ortholog is 100%.

Group of orthologs #144. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 E.cuniculi:56

F6TMJ9              	100.00%		Q8SQM5              	100.00%
F6XF93              	42.23%		
Bootstrap support for F6TMJ9 as seed ortholog is 97%.
Bootstrap support for Q8SQM5 as seed ortholog is 94%.

Group of orthologs #145. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 E.cuniculi:282

F6RNR5              	100.00%		Q8SVN8              	100.00%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for Q8SVN8 as seed ortholog is 100%.

Group of orthologs #146. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 E.cuniculi:282

H2XXL7              	100.00%		Q8SQL0              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for Q8SQL0 as seed ortholog is 100%.

Group of orthologs #147. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 E.cuniculi:280

F6VJT7              	100.00%		Q8SQV8              	100.00%
F7BLJ0              	29.79%		
F6SF16              	12.70%		
Bootstrap support for F6VJT7 as seed ortholog is 100%.
Bootstrap support for Q8SQV8 as seed ortholog is 100%.

Group of orthologs #148. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 E.cuniculi:179

H2XL64              	100.00%		Q8SRL3              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for Q8SRL3 as seed ortholog is 99%.

Group of orthologs #149. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 E.cuniculi:278

F6S6E8              	100.00%		Q8SR45              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for Q8SR45 as seed ortholog is 100%.

Group of orthologs #150. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 E.cuniculi:85

F7ARV5              	100.00%		Q8SR86              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 93%.
Bootstrap support for Q8SR86 as seed ortholog is 99%.

Group of orthologs #151. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 E.cuniculi:276

F6TDD6              	100.00%		Q8SV76              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for Q8SV76 as seed ortholog is 100%.

Group of orthologs #152. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:163

F7A0P0              	100.00%		Q8SRL5              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 99%.
Bootstrap support for Q8SRL5 as seed ortholog is 100%.

Group of orthologs #153. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 E.cuniculi:276

Q4H3S6              	100.00%		Q8SUQ6              	100.00%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for Q8SUQ6 as seed ortholog is 100%.

Group of orthologs #154. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 E.cuniculi:108

F6VHP9              	100.00%		Q8SS96              	100.00%
F6W3R8              	77.54%		
F6SDI7              	46.81%		
F6PLA8              	12.77%		
Bootstrap support for F6VHP9 as seed ortholog is 99%.
Bootstrap support for Q8SS96 as seed ortholog is 99%.

Group of orthologs #155. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 E.cuniculi:274

F6TEN3              	100.00%		Q8SS55              	100.00%
F6W3N0              	13.75%		
Bootstrap support for F6TEN3 as seed ortholog is 100%.
Bootstrap support for Q8SS55 as seed ortholog is 100%.

Group of orthologs #156. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 E.cuniculi:123

F7B1X4              	100.00%		Q8SS21              	100.00%
F6UNP2              	6.05%		
Bootstrap support for F7B1X4 as seed ortholog is 100%.
Bootstrap support for Q8SS21 as seed ortholog is 99%.

Group of orthologs #157. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 E.cuniculi:272

F6UI47              	100.00%		Q8SQP0              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for Q8SQP0 as seed ortholog is 100%.

Group of orthologs #158. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 E.cuniculi:270

F7AX37              	100.00%		Q8SWG3              	100.00%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for Q8SWG3 as seed ortholog is 100%.

Group of orthologs #159. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 E.cuniculi:270

H2XWZ3              	100.00%		Q8SRI0              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for Q8SRI0 as seed ortholog is 100%.

Group of orthologs #160. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 E.cuniculi:141

H2XZY0              	100.00%		Q8SR51              	100.00%
Q1RPX1              	10.72%		
Bootstrap support for H2XZY0 as seed ortholog is 95%.
Bootstrap support for Q8SR51 as seed ortholog is 99%.

Group of orthologs #161. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 E.cuniculi:265

F6T060              	100.00%		Q8SR38              	100.00%
F6SZU4              	68.28%		Q8SR39              	100.00%
Bootstrap support for F6T060 as seed ortholog is 99%.
Bootstrap support for Q8SR38 as seed ortholog is 100%.
Bootstrap support for Q8SR39 as seed ortholog is 100%.

Group of orthologs #162. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 E.cuniculi:265

F6SSX2              	100.00%		Q8SQZ7              	100.00%
Bootstrap support for F6SSX2 as seed ortholog is 99%.
Bootstrap support for Q8SQZ7 as seed ortholog is 100%.

Group of orthologs #163. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 E.cuniculi:265

F6XPZ4              	100.00%		Q8ST28              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for Q8ST28 as seed ortholog is 100%.

Group of orthologs #164. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 E.cuniculi:264

F6PP44              	100.00%		Q8SSM8              	100.00%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for Q8SSM8 as seed ortholog is 100%.

Group of orthologs #165. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 E.cuniculi:264

F7BKT8              	100.00%		Q8SRA6              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for Q8SRA6 as seed ortholog is 100%.

Group of orthologs #166. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 E.cuniculi:262

H2Y3D5              	100.00%		Q8SRE0              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for Q8SRE0 as seed ortholog is 100%.

Group of orthologs #167. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 E.cuniculi:261

F6U609              	100.00%		Q8SS43              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for Q8SS43 as seed ortholog is 100%.

Group of orthologs #168. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 E.cuniculi:261

F6WRF3              	100.00%		Q8SQL6              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for Q8SQL6 as seed ortholog is 100%.

Group of orthologs #169. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 E.cuniculi:258

F6RC25              	100.00%		Q8SR88              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for Q8SR88 as seed ortholog is 100%.

Group of orthologs #170. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 E.cuniculi:257

F6VT08              	100.00%		Q8SQM8              	100.00%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for Q8SQM8 as seed ortholog is 100%.

Group of orthologs #171. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 E.cuniculi:257

F6WAY8              	100.00%		Q8SU52              	100.00%
Bootstrap support for F6WAY8 as seed ortholog is 99%.
Bootstrap support for Q8SU52 as seed ortholog is 100%.

Group of orthologs #172. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 E.cuniculi:136

F6RKK1              	100.00%		Q8SUH1              	100.00%
Bootstrap support for F6RKK1 as seed ortholog is 99%.
Bootstrap support for Q8SUH1 as seed ortholog is 99%.

Group of orthologs #173. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 E.cuniculi:255

F7B658              	100.00%		Q8SRY7              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for Q8SRY7 as seed ortholog is 100%.

Group of orthologs #174. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 E.cuniculi:253

F7A2K6              	100.00%		Q8SRV2              	100.00%
F6V828              	6.88%		
Bootstrap support for F7A2K6 as seed ortholog is 98%.
Bootstrap support for Q8SRV2 as seed ortholog is 100%.

Group of orthologs #175. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 E.cuniculi:253

F7B4V9              	100.00%		Q8SRT8              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for Q8SRT8 as seed ortholog is 100%.

Group of orthologs #176. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 E.cuniculi:251

F6WLN1              	100.00%		Q8SRV0              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for Q8SRV0 as seed ortholog is 100%.

Group of orthologs #177. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 E.cuniculi:248

F6PN41              	100.00%		Q8SR69              	100.00%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for Q8SR69 as seed ortholog is 100%.

Group of orthologs #178. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 E.cuniculi:248

F6UCG0              	100.00%		Q8SSB0              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 97%.
Bootstrap support for Q8SSB0 as seed ortholog is 100%.

Group of orthologs #179. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 E.cuniculi:246

H2XPB4              	100.00%		Q8SQS3              	100.00%
F7BJA7              	24.69%		
F6PKL1              	21.23%		
Bootstrap support for H2XPB4 as seed ortholog is 99%.
Bootstrap support for Q8SQS3 as seed ortholog is 100%.

Group of orthologs #180. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 E.cuniculi:109

F6ZUU0              	100.00%		Q8SR49              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 95%.
Bootstrap support for Q8SR49 as seed ortholog is 98%.

Group of orthologs #181. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 E.cuniculi:149

F6X753              	100.00%		Q8SSB8              	100.00%
L7N0R8              	21.31%		Q8SRK7              	12.46%
F6SUP0              	5.16%		
Bootstrap support for F6X753 as seed ortholog is 100%.
Bootstrap support for Q8SSB8 as seed ortholog is 99%.

Group of orthologs #182. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 E.cuniculi:242

F7A172              	100.00%		Q8SRQ3              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for Q8SRQ3 as seed ortholog is 100%.

Group of orthologs #183. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 E.cuniculi:241

F6SS61              	100.00%		Q8SVM5              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for Q8SVM5 as seed ortholog is 100%.

Group of orthologs #184. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 E.cuniculi:80

F7AZI8              	100.00%		Q8SW92              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 88%.
Bootstrap support for Q8SW92 as seed ortholog is 98%.

Group of orthologs #185. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 E.cuniculi:240

F6SQQ1              	100.00%		Q8SS47              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for Q8SS47 as seed ortholog is 100%.

Group of orthologs #186. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 E.cuniculi:240

F6YY15              	100.00%		Q8SRC6              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for Q8SRC6 as seed ortholog is 100%.

Group of orthologs #187. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 E.cuniculi:239

F7A1S8              	100.00%		Q8SW12              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for Q8SW12 as seed ortholog is 100%.

Group of orthologs #188. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 E.cuniculi:238

F6WRC9              	100.00%		Q8SQJ2              	100.00%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for Q8SQJ2 as seed ortholog is 100%.

Group of orthologs #189. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 E.cuniculi:238

F7AQG9              	100.00%		Q8SQY6              	100.00%
Bootstrap support for F7AQG9 as seed ortholog is 99%.
Bootstrap support for Q8SQY6 as seed ortholog is 100%.

Group of orthologs #190. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 E.cuniculi:236

F6QWP6              	100.00%		Q8SR03              	100.00%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for Q8SR03 as seed ortholog is 100%.

Group of orthologs #191. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 E.cuniculi:236

F7BIS1              	100.00%		Q8SS90              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for Q8SS90 as seed ortholog is 100%.

Group of orthologs #192. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:119

F6TBI8              	100.00%		Q8SQM0              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 97%.
Bootstrap support for Q8SQM0 as seed ortholog is 99%.

Group of orthologs #193. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 E.cuniculi:234

F6Q601              	100.00%		Q8SR80              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for Q8SR80 as seed ortholog is 100%.

Group of orthologs #194. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:233

F6TNW3              	100.00%		Q8SW28              	100.00%
F6WL19              	47.08%		
Bootstrap support for F6TNW3 as seed ortholog is 95%.
Bootstrap support for Q8SW28 as seed ortholog is 100%.

Group of orthologs #195. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 E.cuniculi:233

F6Z2U1              	100.00%		Q8SS10              	100.00%
Bootstrap support for F6Z2U1 as seed ortholog is 99%.
Bootstrap support for Q8SS10 as seed ortholog is 100%.

Group of orthologs #196. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 E.cuniculi:233

H2XWE4              	100.00%		Q8SRG6              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for Q8SRG6 as seed ortholog is 100%.

Group of orthologs #197. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 E.cuniculi:230

H2Y0A5              	100.00%		Q8SQU2              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for Q8SQU2 as seed ortholog is 100%.

Group of orthologs #198. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 E.cuniculi:30

F6TZU9              	100.00%		Q8SRA9              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for Q8SRA9 as seed ortholog is 68%.
Alternative seed ortholog is Q8SSE9 (30 bits away from this cluster)

Group of orthologs #199. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 E.cuniculi:229

F7AH61              	100.00%		Q8SR60              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for Q8SR60 as seed ortholog is 100%.

Group of orthologs #200. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 E.cuniculi:227

F6UZS7              	100.00%		Q8SS04              	100.00%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for Q8SS04 as seed ortholog is 100%.

Group of orthologs #201. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:183

F6YIL9              	100.00%		Q8SSD5              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 99%.
Bootstrap support for Q8SSD5 as seed ortholog is 99%.

Group of orthologs #202. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 E.cuniculi:96

H2XXD3              	100.00%		Q8SRK8              	100.00%
F6PH07              	32.55%		
F6S4F7              	7.49%		
Bootstrap support for H2XXD3 as seed ortholog is 80%.
Bootstrap support for Q8SRK8 as seed ortholog is 99%.

Group of orthologs #203. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 E.cuniculi:48

H2XQT6              	100.00%		Q8SQV1              	100.00%
H2XYB3              	26.18%		
Bootstrap support for H2XQT6 as seed ortholog is 99%.
Bootstrap support for Q8SQV1 as seed ortholog is 87%.

Group of orthologs #204. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 E.cuniculi:224

H2XT98              	100.00%		Q8SQX0              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for Q8SQX0 as seed ortholog is 100%.

Group of orthologs #205. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 E.cuniculi:132

F6WCV2              	100.00%		Q8SR85              	100.00%
                    	       		Q8SR83              	99.80%
Bootstrap support for F6WCV2 as seed ortholog is 99%.
Bootstrap support for Q8SR85 as seed ortholog is 100%.

Group of orthologs #206. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 E.cuniculi:99

H2Y0R2              	100.00%		Q8SSI2              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 93%.
Bootstrap support for Q8SSI2 as seed ortholog is 99%.

Group of orthologs #207. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 E.cuniculi:220

F6QE16              	100.00%		Q8SQW6              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for Q8SQW6 as seed ortholog is 100%.

Group of orthologs #208. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 E.cuniculi:220

F6QIX3              	100.00%		Q8SW60              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for Q8SW60 as seed ortholog is 100%.

Group of orthologs #209. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 E.cuniculi:219

H2XQH0              	100.00%		Q8SSK6              	100.00%
F6ZRC6              	36.70%		
H2XUY3              	17.89%		
Bootstrap support for H2XQH0 as seed ortholog is 92%.
Bootstrap support for Q8SSK6 as seed ortholog is 100%.

Group of orthologs #210. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 E.cuniculi:219

H2XL83              	100.00%		Q8SVW2              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for Q8SVW2 as seed ortholog is 100%.

Group of orthologs #211. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:218

F6U8Z7              	100.00%		Q8SVA6              	100.00%
F6S4Q0              	5.27%		
Bootstrap support for F6U8Z7 as seed ortholog is 92%.
Bootstrap support for Q8SVA6 as seed ortholog is 100%.

Group of orthologs #212. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 E.cuniculi:159

F6Q0U4              	100.00%		Q8SRR6              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 99%.
Bootstrap support for Q8SRR6 as seed ortholog is 99%.

Group of orthologs #213. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 E.cuniculi:218

F6YND1              	100.00%		Q8SRZ8              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for Q8SRZ8 as seed ortholog is 100%.

Group of orthologs #214. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 E.cuniculi:216

F7ACM5              	100.00%		Q8SRP3              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for Q8SRP3 as seed ortholog is 100%.

Group of orthologs #215. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 E.cuniculi:213

F6ZVE7              	100.00%		Q8SR61              	100.00%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for Q8SR61 as seed ortholog is 100%.

Group of orthologs #216. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 E.cuniculi:212

F6XVH4              	100.00%		O62584              	100.00%
                    	       		Q8SRG2              	100.00%
Bootstrap support for F6XVH4 as seed ortholog is 100%.
Bootstrap support for O62584 as seed ortholog is 100%.
Bootstrap support for Q8SRG2 as seed ortholog is 100%.

Group of orthologs #217. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 E.cuniculi:211

F6Z3U3              	100.00%		Q8SSC6              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for Q8SSC6 as seed ortholog is 100%.

Group of orthologs #218. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 E.cuniculi:209

F6UHI7              	100.00%		Q8SSI4              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 99%.
Bootstrap support for Q8SSI4 as seed ortholog is 100%.

Group of orthologs #219. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 E.cuniculi:208

F6SNL0              	100.00%		Q8SSG9              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for Q8SSG9 as seed ortholog is 100%.

Group of orthologs #220. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 E.cuniculi:163

F6TDZ5              	100.00%		Q8SS06              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 94%.
Bootstrap support for Q8SS06 as seed ortholog is 99%.

Group of orthologs #221. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 E.cuniculi:208

F6XQD4              	100.00%		Q8SQV0              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for Q8SQV0 as seed ortholog is 100%.

Group of orthologs #222. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 E.cuniculi:77

F6QXH6              	100.00%		Q8SRE1              	100.00%
F6UAF0              	39.71%		
H2XNB4              	36.03%		
F6RCT7              	36.03%		
F6TFY3              	10.29%		
Bootstrap support for F6QXH6 as seed ortholog is 98%.
Bootstrap support for Q8SRE1 as seed ortholog is 99%.

Group of orthologs #223. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 E.cuniculi:204

F6UUA2              	100.00%		Q8SQS2              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for Q8SQS2 as seed ortholog is 100%.

Group of orthologs #224. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 E.cuniculi:203

F6PSK8              	100.00%		Q8SQX7              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 98%.
Bootstrap support for Q8SQX7 as seed ortholog is 100%.

Group of orthologs #225. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 E.cuniculi:203

F7B0I1              	100.00%		Q8SV20              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for Q8SV20 as seed ortholog is 100%.

Group of orthologs #226. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:56

F6ZVC8              	100.00%		Q8SQV2              	100.00%
K9J6P5              	12.64%		
F7AYD9              	6.10%		
Bootstrap support for F6ZVC8 as seed ortholog is 98%.
Bootstrap support for Q8SQV2 as seed ortholog is 96%.

Group of orthologs #227. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 E.cuniculi:201

F6XKA2              	100.00%		Q8SRE3              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for Q8SRE3 as seed ortholog is 100%.

Group of orthologs #228. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 E.cuniculi:89

F6RHH3              	100.00%		Q8SWA5              	100.00%
F6XHQ2              	8.89%		
Bootstrap support for F6RHH3 as seed ortholog is 100%.
Bootstrap support for Q8SWA5 as seed ortholog is 94%.

Group of orthologs #229. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 E.cuniculi:113

F6WAW7              	100.00%		Q8SR43              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 99%.
Bootstrap support for Q8SR43 as seed ortholog is 99%.

Group of orthologs #230. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 E.cuniculi:197

H2Y359              	100.00%		Q8SR12              	100.00%
Bootstrap support for H2Y359 as seed ortholog is 100%.
Bootstrap support for Q8SR12 as seed ortholog is 100%.

Group of orthologs #231. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 E.cuniculi:195

F6SSM8              	100.00%		Q8SRC2              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for Q8SRC2 as seed ortholog is 100%.

Group of orthologs #232. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 E.cuniculi:195

F6S8Z0              	100.00%		Q8SW70              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 99%.
Bootstrap support for Q8SW70 as seed ortholog is 100%.

Group of orthologs #233. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 E.cuniculi:195

F6WJQ0              	100.00%		Q8SR96              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for Q8SR96 as seed ortholog is 100%.

Group of orthologs #234. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 E.cuniculi:194

F6SPZ6              	100.00%		Q8SQZ3              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for Q8SQZ3 as seed ortholog is 100%.

Group of orthologs #235. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 E.cuniculi:194

F6X3Q7              	100.00%		Q8SS97              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for Q8SS97 as seed ortholog is 100%.

Group of orthologs #236. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 E.cuniculi:194

F6Z743              	100.00%		Q8SRB1              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for Q8SRB1 as seed ortholog is 100%.

Group of orthologs #237. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 E.cuniculi:89

F6S1S7              	100.00%		Q8SRC8              	100.00%
Bootstrap support for F6S1S7 as seed ortholog is 97%.
Bootstrap support for Q8SRC8 as seed ortholog is 99%.

Group of orthologs #238. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 E.cuniculi:191

F6Q096              	100.00%		Q8SSM6              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for Q8SSM6 as seed ortholog is 100%.

Group of orthologs #239. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 E.cuniculi:191

F6YSX7              	100.00%		Q8SSL9              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for Q8SSL9 as seed ortholog is 100%.

Group of orthologs #240. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 E.cuniculi:190

F6TXT5              	100.00%		Q8SQM3              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for Q8SQM3 as seed ortholog is 100%.

Group of orthologs #241. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 E.cuniculi:190

F6TFE2              	100.00%		Q8SRW3              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for Q8SRW3 as seed ortholog is 100%.

Group of orthologs #242. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 E.cuniculi:190

F6UFF5              	100.00%		Q8SS32              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 99%.
Bootstrap support for Q8SS32 as seed ortholog is 100%.

Group of orthologs #243. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 E.cuniculi:189

F6Z3S0              	100.00%		Q8SRD8              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for Q8SRD8 as seed ortholog is 100%.

Group of orthologs #244. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 E.cuniculi:189

F6ZN43              	100.00%		Q8SVG2              	100.00%
Bootstrap support for F6ZN43 as seed ortholog is 100%.
Bootstrap support for Q8SVG2 as seed ortholog is 100%.

Group of orthologs #245. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 E.cuniculi:189

H2XVD5              	100.00%		Q8SQN7              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for Q8SQN7 as seed ortholog is 100%.

Group of orthologs #246. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 E.cuniculi:188

F6YM02              	100.00%		Q8SQT9              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for Q8SQT9 as seed ortholog is 100%.

Group of orthologs #247. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 E.cuniculi:50

Q7YT82              	100.00%		Q8SR68              	100.00%
F6PNQ0              	16.75%		
Q7YT79              	15.76%		
F6PNI9              	12.32%		
Q7YT73              	11.33%		
Q7YT74              	10.34%		
Bootstrap support for Q7YT82 as seed ortholog is 98%.
Bootstrap support for Q8SR68 as seed ortholog is 97%.

Group of orthologs #248. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 E.cuniculi:186

F6UX10              	100.00%		Q8SSE3              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for Q8SSE3 as seed ortholog is 100%.

Group of orthologs #249. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 E.cuniculi:185

F6U1E2              	100.00%		Q8SRA3              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 94%.
Bootstrap support for Q8SRA3 as seed ortholog is 100%.

Group of orthologs #250. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 E.cuniculi:185

F7AMH0              	100.00%		Q8SW59              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 96%.
Bootstrap support for Q8SW59 as seed ortholog is 100%.

Group of orthologs #251. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 E.cuniculi:184

F6Q8V8              	100.00%		Q8SS72              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for Q8SS72 as seed ortholog is 100%.

Group of orthologs #252. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 E.cuniculi:184

F6WKD5              	100.00%		Q8SVI3              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 89%.
Bootstrap support for Q8SVI3 as seed ortholog is 100%.

Group of orthologs #253. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 E.cuniculi:184

H2XUQ0              	100.00%		Q8SSM4              	100.00%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for Q8SSM4 as seed ortholog is 100%.

Group of orthologs #254. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 E.cuniculi:88

F6T718              	100.00%		Q8SQZ4              	100.00%
F6XT42              	13.95%		
Bootstrap support for F6T718 as seed ortholog is 62%.
Alternative seed ortholog is H2XRL6 (8 bits away from this cluster)
Bootstrap support for Q8SQZ4 as seed ortholog is 99%.

Group of orthologs #255. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 E.cuniculi:183

F6TJJ7              	100.00%		Q8SWM6              	100.00%
F6XWE7              	9.35%		
Bootstrap support for F6TJJ7 as seed ortholog is 51%.
Alternative seed ortholog is F6SUL1 (30 bits away from this cluster)
Bootstrap support for Q8SWM6 as seed ortholog is 100%.

Group of orthologs #256. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 E.cuniculi:183

F6TQG1              	100.00%		Q8SQN1              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 99%.
Bootstrap support for Q8SQN1 as seed ortholog is 100%.

Group of orthologs #257. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 E.cuniculi:182

F6VUL9              	100.00%		Q8SWB3              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 99%.
Bootstrap support for Q8SWB3 as seed ortholog is 100%.

Group of orthologs #258. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 E.cuniculi:181

F6XUD5              	100.00%		Q8SSF4              	100.00%
F6V9F0              	45.34%		
Bootstrap support for F6XUD5 as seed ortholog is 99%.
Bootstrap support for Q8SSF4 as seed ortholog is 100%.

Group of orthologs #259. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 E.cuniculi:127

H2XVC3              	100.00%		Q8SW94              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for Q8SW94 as seed ortholog is 99%.

Group of orthologs #260. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 E.cuniculi:38

F6Z255              	100.00%		Q8SW02              	100.00%
H2XL87              	13.66%		
F6UXB3              	9.69%		
H2XWC0              	9.69%		
H2XWP0              	9.25%		
Bootstrap support for F6Z255 as seed ortholog is 84%.
Bootstrap support for Q8SW02 as seed ortholog is 92%.

Group of orthologs #261. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 E.cuniculi:64

F6XCQ7              	100.00%		Q8SS52              	100.00%
F6Z9S5              	9.16%		
Bootstrap support for F6XCQ7 as seed ortholog is 71%.
Alternative seed ortholog is H2XY76 (18 bits away from this cluster)
Bootstrap support for Q8SS52 as seed ortholog is 98%.

Group of orthologs #262. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 E.cuniculi:180

H2XP26              	100.00%		Q8SSM2              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for Q8SSM2 as seed ortholog is 100%.

Group of orthologs #263. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 E.cuniculi:180

H2XM91              	100.00%		Q8SW98              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for Q8SW98 as seed ortholog is 100%.

Group of orthologs #264. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 E.cuniculi:75

H2XRU5              	100.00%		Q8SR17              	100.00%
Bootstrap support for H2XRU5 as seed ortholog is 98%.
Bootstrap support for Q8SR17 as seed ortholog is 99%.

Group of orthologs #265. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 E.cuniculi:178

F6XPL3              	100.00%		Q8SRB7              	100.00%
F7B875              	38.44%		
F7AAZ2              	21.76%		
F6UK45              	10.97%		
F6TB77              	6.26%		
H2XNC3              	5.17%		
Bootstrap support for F6XPL3 as seed ortholog is 90%.
Bootstrap support for Q8SRB7 as seed ortholog is 100%.

Group of orthologs #266. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 E.cuniculi:178

F6ZCS4              	100.00%		Q8SUU4              	100.00%
                    	       		Q8SW07              	26.95%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for Q8SUU4 as seed ortholog is 100%.

Group of orthologs #267. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:178

F6TIU3              	100.00%		Q8SR77              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 99%.
Bootstrap support for Q8SR77 as seed ortholog is 100%.

Group of orthologs #268. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 E.cuniculi:178

F7A955              	100.00%		Q8SR11              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for Q8SR11 as seed ortholog is 100%.

Group of orthologs #269. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 E.cuniculi:67

F6WQV1              	100.00%		Q8SQQ9              	100.00%
Bootstrap support for F6WQV1 as seed ortholog is 83%.
Bootstrap support for Q8SQQ9 as seed ortholog is 93%.

Group of orthologs #270. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 E.cuniculi:86

F6Z491              	100.00%		Q8SRU3              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 94%.
Bootstrap support for Q8SRU3 as seed ortholog is 99%.

Group of orthologs #271. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 E.cuniculi:46

Q9NL43              	100.00%		Q8SRI3              	100.00%
Bootstrap support for Q9NL43 as seed ortholog is 84%.
Bootstrap support for Q8SRI3 as seed ortholog is 90%.

Group of orthologs #272. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 E.cuniculi:174

F6QMD4              	100.00%		Q8SW31              	100.00%
F6RCR9              	5.41%		
Bootstrap support for F6QMD4 as seed ortholog is 59%.
Alternative seed ortholog is F7B9D6 (10 bits away from this cluster)
Bootstrap support for Q8SW31 as seed ortholog is 100%.

Group of orthologs #273. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:174

F6Q9C5              	100.00%		Q8SSL8              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 99%.
Bootstrap support for Q8SSL8 as seed ortholog is 100%.

Group of orthologs #274. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 E.cuniculi:68

F6PJL4              	100.00%		Q8SR98              	100.00%
F6R6I1              	12.00%		
F6VXQ6              	11.00%		
Bootstrap support for F6PJL4 as seed ortholog is 83%.
Bootstrap support for Q8SR98 as seed ortholog is 98%.

Group of orthologs #275. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 E.cuniculi:173

F6T8Y3              	100.00%		Q8SQT3              	100.00%
Bootstrap support for F6T8Y3 as seed ortholog is 93%.
Bootstrap support for Q8SQT3 as seed ortholog is 100%.

Group of orthologs #276. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 E.cuniculi:173

F6YGG6              	100.00%		Q8SRU8              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for Q8SRU8 as seed ortholog is 100%.

Group of orthologs #277. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 E.cuniculi:172

F6SZY0              	100.00%		Q8SR99              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for Q8SR99 as seed ortholog is 100%.

Group of orthologs #278. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 E.cuniculi:172

H2Y0S6              	100.00%		Q8SQQ5              	100.00%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for Q8SQQ5 as seed ortholog is 100%.

Group of orthologs #279. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 E.cuniculi:51

F6TMT5              	100.00%		Q8SS54              	100.00%
Bootstrap support for F6TMT5 as seed ortholog is 65%.
Alternative seed ortholog is F6XWG9 (11 bits away from this cluster)
Bootstrap support for Q8SS54 as seed ortholog is 98%.

Group of orthologs #280. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 E.cuniculi:65

H2XZ35              	100.00%		Q8SRL8              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 100%.
Bootstrap support for Q8SRL8 as seed ortholog is 94%.

Group of orthologs #281. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 E.cuniculi:170

F7B1Y1              	100.00%		Q8SR65              	100.00%
Q8I7D5              	100.00%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for Q8I7D5 as seed ortholog is 100%.
Bootstrap support for Q8SR65 as seed ortholog is 100%.

Group of orthologs #282. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 E.cuniculi:170

F6RGI4              	100.00%		Q8SR84              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for Q8SR84 as seed ortholog is 100%.

Group of orthologs #283. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 E.cuniculi:170

F7BHB2              	100.00%		Q8SQS1              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for Q8SQS1 as seed ortholog is 100%.

Group of orthologs #284. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 E.cuniculi:170

H2XW76              	100.00%		Q8SR29              	100.00%
Bootstrap support for H2XW76 as seed ortholog is 99%.
Bootstrap support for Q8SR29 as seed ortholog is 100%.

Group of orthologs #285. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 E.cuniculi:168

F6U3Q1              	100.00%		Q8SUH5              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for Q8SUH5 as seed ortholog is 100%.

Group of orthologs #286. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 E.cuniculi:168

F6YVU0              	100.00%		Q8SS81              	100.00%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for Q8SS81 as seed ortholog is 100%.

Group of orthologs #287. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 E.cuniculi:168

H2XUA5              	100.00%		Q8STM5              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for Q8STM5 as seed ortholog is 100%.

Group of orthologs #288. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 E.cuniculi:35

F7AHT0              	100.00%		Q8SS77              	100.00%
H2XK16              	98.97%		
Bootstrap support for F7AHT0 as seed ortholog is 99%.
Bootstrap support for Q8SS77 as seed ortholog is 93%.

Group of orthologs #289. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 E.cuniculi:94

H2XWU7              	100.00%		Q8SV24              	100.00%
F6STU7              	9.09%		
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for Q8SV24 as seed ortholog is 99%.

Group of orthologs #290. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 E.cuniculi:165

F6TJ64              	100.00%		Q8SU53              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for Q8SU53 as seed ortholog is 100%.

Group of orthologs #291. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 E.cuniculi:165

F6ZLM3              	100.00%		Q8SRJ7              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for Q8SRJ7 as seed ortholog is 100%.

Group of orthologs #292. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 E.cuniculi:165

H2XYT3              	100.00%		Q8SU19              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for Q8SU19 as seed ortholog is 100%.

Group of orthologs #293. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 E.cuniculi:53

F6XSL1              	100.00%		Q8SRQ2              	100.00%
F6PJ70              	17.19%		
F6UBJ3              	7.50%		
F7BP11              	6.62%		
Bootstrap support for F6XSL1 as seed ortholog is 84%.
Bootstrap support for Q8SRQ2 as seed ortholog is 87%.

Group of orthologs #294. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 E.cuniculi:121

F6TJ76              	100.00%		Q8SSI0              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for Q8SSI0 as seed ortholog is 100%.

Group of orthologs #295. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 E.cuniculi:34

F6V5P8              	100.00%		Q8SQR3              	100.00%
Bootstrap support for F6V5P8 as seed ortholog is 100%.
Bootstrap support for Q8SQR3 as seed ortholog is 80%.

Group of orthologs #296. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 E.cuniculi:163

F6Z0U1              	100.00%		Q8SRR7              	100.00%
Bootstrap support for F6Z0U1 as seed ortholog is 100%.
Bootstrap support for Q8SRR7 as seed ortholog is 100%.

Group of orthologs #297. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 E.cuniculi:163

H2XKA9              	100.00%		Q8STZ8              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for Q8STZ8 as seed ortholog is 100%.

Group of orthologs #298. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 E.cuniculi:162

F6U3G5              	100.00%		Q8SQI1              	100.00%
Bootstrap support for F6U3G5 as seed ortholog is 100%.
Bootstrap support for Q8SQI1 as seed ortholog is 100%.

Group of orthologs #299. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 E.cuniculi:162

F6ZWW6              	100.00%		Q8SW65              	100.00%
Bootstrap support for F6ZWW6 as seed ortholog is 98%.
Bootstrap support for Q8SW65 as seed ortholog is 100%.

Group of orthologs #300. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 E.cuniculi:161

F6Q0S7              	100.00%		Q8SVX5              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for Q8SVX5 as seed ortholog is 100%.

Group of orthologs #301. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 E.cuniculi:100

F6RA65              	100.00%		Q8STQ0              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for Q8STQ0 as seed ortholog is 99%.

Group of orthologs #302. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 E.cuniculi:161

F6T9R1              	100.00%		Q8SSA6              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for Q8SSA6 as seed ortholog is 100%.

Group of orthologs #303. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 E.cuniculi:161

F7AJZ2              	100.00%		Q8SV71              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for Q8SV71 as seed ortholog is 100%.

Group of orthologs #304. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 E.cuniculi:99

F6ZX23              	100.00%		Q8SR36              	100.00%
F6Y5B7              	11.97%		
F6Y4V4              	5.98%		
Bootstrap support for F6ZX23 as seed ortholog is 86%.
Bootstrap support for Q8SR36 as seed ortholog is 99%.

Group of orthologs #305. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:4

H2Y169              	100.00%		Q8STS8              	100.00%
F7AQE7              	20.69%		
Bootstrap support for H2Y169 as seed ortholog is 98%.
Bootstrap support for Q8STS8 as seed ortholog is 53%.
Alternative seed ortholog is Q8SSI8 (4 bits away from this cluster)

Group of orthologs #306. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:160

H2XYW0              	100.00%		Q8SS61              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 99%.
Bootstrap support for Q8SS61 as seed ortholog is 100%.

Group of orthologs #307. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 E.cuniculi:158

F6PKL5              	100.00%		Q8SRK0              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 94%.
Bootstrap support for Q8SRK0 as seed ortholog is 100%.

Group of orthologs #308. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 E.cuniculi:158

F6RD37              	100.00%		Q8SQZ0              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for Q8SQZ0 as seed ortholog is 100%.

Group of orthologs #309. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 E.cuniculi:157

F6PM63              	100.00%		Q8SR82              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for Q8SR82 as seed ortholog is 100%.

Group of orthologs #310. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 E.cuniculi:157

F7BDS3              	100.00%		Q8SUB6              	100.00%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for Q8SUB6 as seed ortholog is 100%.

Group of orthologs #311. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 E.cuniculi:155

H2XZ54              	100.00%		Q8SRR5              	100.00%
F6Y5Q3              	26.40%		
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for Q8SRR5 as seed ortholog is 100%.

Group of orthologs #312. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 E.cuniculi:154

F6RID7              	100.00%		Q8SQZ1              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for Q8SQZ1 as seed ortholog is 100%.

Group of orthologs #313. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 E.cuniculi:154

F6W9I8              	100.00%		Q8SRF4              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 94%.
Bootstrap support for Q8SRF4 as seed ortholog is 100%.

Group of orthologs #314. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 E.cuniculi:152

F6VN41              	100.00%		Q8SV73              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for Q8SV73 as seed ortholog is 100%.

Group of orthologs #315. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 E.cuniculi:151

F7B1W3              	100.00%		Q8SSA4              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for Q8SSA4 as seed ortholog is 100%.

Group of orthologs #316. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 E.cuniculi:150

F6VPX3              	100.00%		Q8SR70              	100.00%
Bootstrap support for F6VPX3 as seed ortholog is 100%.
Bootstrap support for Q8SR70 as seed ortholog is 100%.

Group of orthologs #317. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 E.cuniculi:150

F7A429              	100.00%		Q8SVF0              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for Q8SVF0 as seed ortholog is 100%.

Group of orthologs #318. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 E.cuniculi:149

F7BBQ5              	100.00%		Q8SRM7              	100.00%
F6YB01              	53.48%		
Bootstrap support for F7BBQ5 as seed ortholog is 99%.
Bootstrap support for Q8SRM7 as seed ortholog is 100%.

Group of orthologs #319. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 E.cuniculi:22

F6YM78              	100.00%		Q8SS87              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for Q8SS87 as seed ortholog is 72%.
Alternative seed ortholog is Q8SUM4 (22 bits away from this cluster)

Group of orthologs #320. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 E.cuniculi:148

F6Y3K6              	100.00%		Q8SUM2              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for Q8SUM2 as seed ortholog is 100%.

Group of orthologs #321. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 E.cuniculi:66

F6ZKW1              	100.00%		Q8SS11              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 96%.
Bootstrap support for Q8SS11 as seed ortholog is 99%.

Group of orthologs #322. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 E.cuniculi:148

H2XTB0              	100.00%		Q8SS60              	100.00%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for Q8SS60 as seed ortholog is 100%.

Group of orthologs #323. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 E.cuniculi:147

H2XU41              	100.00%		Q8SS85              	100.00%
F6QQZ3              	36.45%		
Q68A28              	33.73%		
Bootstrap support for H2XU41 as seed ortholog is 99%.
Bootstrap support for Q8SS85 as seed ortholog is 100%.

Group of orthologs #324. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 E.cuniculi:147

Q8I7E2              	100.00%		Q8SRM5              	100.00%
H2XWN2              	23.59%		
Bootstrap support for Q8I7E2 as seed ortholog is 100%.
Bootstrap support for Q8SRM5 as seed ortholog is 100%.

Group of orthologs #325. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 E.cuniculi:147

F6Z1E3              	100.00%		Q8SS05              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for Q8SS05 as seed ortholog is 100%.

Group of orthologs #326. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 E.cuniculi:146

F6XBT4              	100.00%		Q8SRP5              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for Q8SRP5 as seed ortholog is 100%.

Group of orthologs #327. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 E.cuniculi:146

F7BK08              	100.00%		Q8SUB9              	100.00%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for Q8SUB9 as seed ortholog is 100%.

Group of orthologs #328. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 E.cuniculi:146

H2Y130              	100.00%		Q8SRN0              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for Q8SRN0 as seed ortholog is 100%.

Group of orthologs #329. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 E.cuniculi:145

F6TB52              	100.00%		Q8SRH7              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for Q8SRH7 as seed ortholog is 100%.

Group of orthologs #330. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 E.cuniculi:145

F6V6S8              	100.00%		Q8SQV7              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for Q8SQV7 as seed ortholog is 100%.

Group of orthologs #331. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 E.cuniculi:145

F7AMR5              	100.00%		Q8SRY0              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for Q8SRY0 as seed ortholog is 100%.

Group of orthologs #332. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 E.cuniculi:143

F6TMB1              	100.00%		Q8SQR5              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for Q8SQR5 as seed ortholog is 100%.

Group of orthologs #333. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:86

F6TXW3              	100.00%		Q8SWD4              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 99%.
Bootstrap support for Q8SWD4 as seed ortholog is 100%.

Group of orthologs #334. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 E.cuniculi:143

F6WB92              	100.00%		Q8SUJ2              	100.00%
Bootstrap support for F6WB92 as seed ortholog is 100%.
Bootstrap support for Q8SUJ2 as seed ortholog is 100%.

Group of orthologs #335. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 E.cuniculi:143

F6Y6X7              	100.00%		O62581              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for O62581 as seed ortholog is 100%.

Group of orthologs #336. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 E.cuniculi:143

F6YA95              	100.00%		Q8SRD5              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for Q8SRD5 as seed ortholog is 100%.

Group of orthologs #337. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 E.cuniculi:142

F7AI19              	100.00%		Q8STX6              	100.00%
F6X4I5              	10.06%		
F6ZCT8              	8.10%		
F7AAW0              	6.42%		
Bootstrap support for F7AI19 as seed ortholog is 97%.
Bootstrap support for Q8STX6 as seed ortholog is 100%.

Group of orthologs #338. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 E.cuniculi:51

Q7YT71              	100.00%		Q8SVZ2              	100.00%
Bootstrap support for Q7YT71 as seed ortholog is 53%.
Alternative seed ortholog is Q7YT70 (25 bits away from this cluster)
Bootstrap support for Q8SVZ2 as seed ortholog is 69%.
Alternative seed ortholog is Q8SSH9 (51 bits away from this cluster)

Group of orthologs #339. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 E.cuniculi:141

F6RMU1              	100.00%		Q8SR21              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for Q8SR21 as seed ortholog is 100%.

Group of orthologs #340. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:141

F6SFM0              	100.00%		Q8SQR4              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 96%.
Bootstrap support for Q8SQR4 as seed ortholog is 100%.

Group of orthologs #341. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 E.cuniculi:139

F6VKZ4              	100.00%		Q8SR41              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for Q8SR41 as seed ortholog is 100%.

Group of orthologs #342. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 E.cuniculi:139

F7A5L4              	100.00%		Q8SRJ9              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for Q8SRJ9 as seed ortholog is 100%.

Group of orthologs #343. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 E.cuniculi:139

F7BBD1              	100.00%		Q8SQU3              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for Q8SQU3 as seed ortholog is 100%.

Group of orthologs #344. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 E.cuniculi:139

H2XQ81              	100.00%		Q8SVL0              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 99%.
Bootstrap support for Q8SVL0 as seed ortholog is 100%.

Group of orthologs #345. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 E.cuniculi:138

F6V136              	100.00%		Q8SQY1              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for Q8SQY1 as seed ortholog is 100%.

Group of orthologs #346. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 E.cuniculi:138

F6Z8G0              	100.00%		Q8SSA8              	100.00%
Bootstrap support for F6Z8G0 as seed ortholog is 88%.
Bootstrap support for Q8SSA8 as seed ortholog is 100%.

Group of orthologs #347. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 E.cuniculi:137

F6Y7E9              	100.00%		Q8SS93              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for Q8SS93 as seed ortholog is 100%.

Group of orthologs #348. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:136

F6RD78              	100.00%		Q8SS12              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 86%.
Bootstrap support for Q8SS12 as seed ortholog is 100%.

Group of orthologs #349. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 E.cuniculi:136

F6TQ69              	100.00%		Q8SR54              	100.00%
Bootstrap support for F6TQ69 as seed ortholog is 97%.
Bootstrap support for Q8SR54 as seed ortholog is 100%.

Group of orthologs #350. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 E.cuniculi:136

F6UUL4              	100.00%		Q8SRC9              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for Q8SRC9 as seed ortholog is 100%.

Group of orthologs #351. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 E.cuniculi:136

F6TIM2              	100.00%		Q8SVI2              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for Q8SVI2 as seed ortholog is 100%.

Group of orthologs #352. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 E.cuniculi:136

H2XSU1              	100.00%		Q8SRH6              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 99%.
Bootstrap support for Q8SRH6 as seed ortholog is 100%.

Group of orthologs #353. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 E.cuniculi:135

F6Y6W3              	100.00%		Q8SUC4              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for Q8SUC4 as seed ortholog is 100%.

Group of orthologs #354. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 E.cuniculi:134

F6V771              	100.00%		Q8SSD6              	100.00%
Bootstrap support for F6V771 as seed ortholog is 100%.
Bootstrap support for Q8SSD6 as seed ortholog is 100%.

Group of orthologs #355. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 E.cuniculi:131

F6PP61              	100.00%		Q8SS01              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for Q8SS01 as seed ortholog is 100%.

Group of orthologs #356. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 E.cuniculi:131

F6SK91              	100.00%		Q8SS22              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for Q8SS22 as seed ortholog is 100%.

Group of orthologs #357. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 E.cuniculi:131

F6U9X5              	100.00%		Q8SSG1              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for Q8SSG1 as seed ortholog is 100%.

Group of orthologs #358. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 E.cuniculi:130

F6UUV5              	100.00%		Q8SV52              	100.00%
Bootstrap support for F6UUV5 as seed ortholog is 100%.
Bootstrap support for Q8SV52 as seed ortholog is 100%.

Group of orthologs #359. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 E.cuniculi:129

H2XKH3              	100.00%		Q8SRF2              	100.00%
F6T453              	6.88%		
F6ZID3              	5.91%		
Bootstrap support for H2XKH3 as seed ortholog is 86%.
Bootstrap support for Q8SRF2 as seed ortholog is 100%.

Group of orthologs #360. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 E.cuniculi:129

F6UF46              	100.00%		Q8SRL7              	100.00%
F6QGB1              	18.21%		
Bootstrap support for F6UF46 as seed ortholog is 100%.
Bootstrap support for Q8SRL7 as seed ortholog is 100%.

Group of orthologs #361. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 E.cuniculi:129

F6R5Z4              	100.00%		Q8SVZ4              	100.00%
Bootstrap support for F6R5Z4 as seed ortholog is 100%.
Bootstrap support for Q8SVZ4 as seed ortholog is 100%.

Group of orthologs #362. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 E.cuniculi:129

F6TLE4              	100.00%		Q8SS41              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for Q8SS41 as seed ortholog is 100%.

Group of orthologs #363. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 E.cuniculi:129

F6X3S3              	100.00%		Q8SW06              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for Q8SW06 as seed ortholog is 100%.

Group of orthologs #364. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 E.cuniculi:129

H2Y1I3              	100.00%		Q8SQX4              	100.00%
Bootstrap support for H2Y1I3 as seed ortholog is 100%.
Bootstrap support for Q8SQX4 as seed ortholog is 100%.

Group of orthologs #365. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 E.cuniculi:128

F6VQ10              	100.00%		Q8SRJ1              	100.00%
Q4H2R2              	100.00%		
Bootstrap support for F6VQ10 as seed ortholog is 100%.
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for Q8SRJ1 as seed ortholog is 100%.

Group of orthologs #366. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 E.cuniculi:128

F6YBW7              	100.00%		Q8SRM6              	100.00%
F6ZUD0              	7.13%		
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for Q8SRM6 as seed ortholog is 100%.

Group of orthologs #367. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 E.cuniculi:128

H2XU57              	100.00%		Q8SRB3              	100.00%
Q8I7D6              	98.84%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for Q8SRB3 as seed ortholog is 100%.

Group of orthologs #368. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 E.cuniculi:128

F6RZU6              	100.00%		Q8SRV3              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for Q8SRV3 as seed ortholog is 100%.

Group of orthologs #369. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 E.cuniculi:128

F6ZHM4              	100.00%		Q8SQQ6              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for Q8SQQ6 as seed ortholog is 100%.

Group of orthologs #370. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 E.cuniculi:128

F7AUY7              	100.00%		Q8SRQ6              	100.00%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for Q8SRQ6 as seed ortholog is 100%.

Group of orthologs #371. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 E.cuniculi:127

H2Y1T7              	100.00%		Q8SRM9              	100.00%
F6YJ55              	45.21%		
F6YJ69              	43.81%		
F6WY28              	41.24%		
F6VYA1              	28.62%		
F6XMJ7              	27.10%		
F6YP78              	27.10%		
F6YYX0              	25.58%		
F6WN12              	23.60%		
F7AGY9              	20.79%		
F7B629              	20.68%		
F6WDV1              	20.09%		
F6ZSG1              	19.51%		
F6WSG2              	18.93%		
F7A9X4              	18.69%		
F6ZS22              	16.00%		
F6TBT3              	15.65%		
F6W4G0              	13.55%		
F6YJM6              	13.32%		
Bootstrap support for H2Y1T7 as seed ortholog is 95%.
Bootstrap support for Q8SRM9 as seed ortholog is 100%.

Group of orthologs #372. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 E.cuniculi:127

F6SU13              	100.00%		Q8SS18              	100.00%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for Q8SS18 as seed ortholog is 100%.

Group of orthologs #373. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 E.cuniculi:127

F6YB21              	100.00%		Q8SR18              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for Q8SR18 as seed ortholog is 100%.

Group of orthologs #374. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 E.cuniculi:126

F6YHS8              	100.00%		Q8SVI6              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for Q8SVI6 as seed ortholog is 100%.

Group of orthologs #375. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 E.cuniculi:126

H2XVQ9              	100.00%		Q8SRW6              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for Q8SRW6 as seed ortholog is 100%.

Group of orthologs #376. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 E.cuniculi:125

I6L7H7              	100.00%		Q8SVV3              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for Q8SVV3 as seed ortholog is 100%.

Group of orthologs #377. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 E.cuniculi:124

F6QQ08              	100.00%		Q8SUF5              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for Q8SUF5 as seed ortholog is 100%.

Group of orthologs #378. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 E.cuniculi:124

F6UW27              	100.00%		Q8SUA9              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for Q8SUA9 as seed ortholog is 100%.

Group of orthologs #379. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 E.cuniculi:124

F6YXT8              	100.00%		Q8SR66              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for Q8SR66 as seed ortholog is 100%.

Group of orthologs #380. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 E.cuniculi:124

F7AZT4              	100.00%		Q8SVV6              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 83%.
Bootstrap support for Q8SVV6 as seed ortholog is 100%.

Group of orthologs #381. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 E.cuniculi:123

F6VD75              	100.00%		Q8SW97              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for Q8SW97 as seed ortholog is 100%.

Group of orthologs #382. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 E.cuniculi:123

F7B2L3              	100.00%		Q8SRE7              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for Q8SRE7 as seed ortholog is 100%.

Group of orthologs #383. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 E.cuniculi:123

H2XNZ7              	100.00%		Q8SWJ6              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 89%.
Bootstrap support for Q8SWJ6 as seed ortholog is 100%.

Group of orthologs #384. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 E.cuniculi:122

F6RCC2              	100.00%		Q8SW05              	100.00%
I6L237              	97.28%		
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for Q8SW05 as seed ortholog is 100%.

Group of orthologs #385. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 E.cuniculi:122

F6WM99              	100.00%		Q8SRG5              	100.00%
Bootstrap support for F6WM99 as seed ortholog is 100%.
Bootstrap support for Q8SRG5 as seed ortholog is 100%.

Group of orthologs #386. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:60

F6R8L5              	100.00%		Q8SU70              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for Q8SU70 as seed ortholog is 92%.

Group of orthologs #387. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:121

F6QSK8              	100.00%		Q8SWC5              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for Q8SWC5 as seed ortholog is 100%.

Group of orthologs #388. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:121

F6UGN5              	100.00%		Q8SWP5              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for Q8SWP5 as seed ortholog is 100%.

Group of orthologs #389. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:121

F7A9D9              	100.00%		Q8SRM8              	100.00%
Bootstrap support for F7A9D9 as seed ortholog is 98%.
Bootstrap support for Q8SRM8 as seed ortholog is 100%.

Group of orthologs #390. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:121

F7AX62              	100.00%		Q8SR89              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for Q8SR89 as seed ortholog is 100%.

Group of orthologs #391. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:121

H2Y197              	100.00%		Q8SRF1              	100.00%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for Q8SRF1 as seed ortholog is 100%.

Group of orthologs #392. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:121

H2Y1Y8              	100.00%		Q8SRA7              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for Q8SRA7 as seed ortholog is 100%.

Group of orthologs #393. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 E.cuniculi:121

Q1RLA5              	100.00%		Q8SQL5              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for Q8SQL5 as seed ortholog is 100%.

Group of orthologs #394. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 E.cuniculi:120

F6S909              	100.00%		Q8SRA0              	100.00%
F6S925              	41.54%		
Q4H398              	29.98%		
Q4H396              	23.95%		
Bootstrap support for F6S909 as seed ortholog is 83%.
Bootstrap support for Q8SRA0 as seed ortholog is 100%.

Group of orthologs #395. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 E.cuniculi:120

F6X0N8              	100.00%		Q8SSG0              	100.00%
L7N0S6              	88.93%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for Q8SSG0 as seed ortholog is 100%.

Group of orthologs #396. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 E.cuniculi:63

H2XRD4              	100.00%		Q8SSB5              	100.00%
F6S6V5              	31.47%		
Bootstrap support for H2XRD4 as seed ortholog is 92%.
Bootstrap support for Q8SSB5 as seed ortholog is 99%.

Group of orthologs #397. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 E.cuniculi:120

F7AP04              	100.00%		Q8SR25              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for Q8SR25 as seed ortholog is 100%.

Group of orthologs #398. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 E.cuniculi:120

H2XWR8              	100.00%		Q8SUV3              	100.00%
Bootstrap support for H2XWR8 as seed ortholog is 100%.
Bootstrap support for Q8SUV3 as seed ortholog is 100%.

Group of orthologs #399. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 E.cuniculi:119

F6QID5              	100.00%		Q8SSH8              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for Q8SSH8 as seed ortholog is 100%.

Group of orthologs #400. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 E.cuniculi:119

H2Y1N7              	100.00%		Q8SSH7              	100.00%
Bootstrap support for H2Y1N7 as seed ortholog is 79%.
Bootstrap support for Q8SSH7 as seed ortholog is 100%.

Group of orthologs #401. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 E.cuniculi:118

H2XZJ2              	100.00%		Q8SS75              	100.00%
F6W6Z9              	28.69%		
F6VT59              	16.88%		
Bootstrap support for H2XZJ2 as seed ortholog is 96%.
Bootstrap support for Q8SS75 as seed ortholog is 100%.

Group of orthologs #402. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 E.cuniculi:118

F6WYT3              	100.00%		Q8SQW8              	100.00%
H2XRA0              	30.35%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for Q8SQW8 as seed ortholog is 100%.

Group of orthologs #403. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 E.cuniculi:118

F7AFK8              	100.00%		Q8SUC7              	100.00%
F6QL17              	6.00%		
Bootstrap support for F7AFK8 as seed ortholog is 100%.
Bootstrap support for Q8SUC7 as seed ortholog is 100%.

Group of orthologs #404. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 E.cuniculi:118

F7A2R6              	100.00%		Q8SVK4              	100.00%
                    	       		Q8STY4              	11.48%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for Q8SVK4 as seed ortholog is 100%.

Group of orthologs #405. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 E.cuniculi:68

F6RGE7              	100.00%		Q8SS09              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 94%.
Bootstrap support for Q8SS09 as seed ortholog is 99%.

Group of orthologs #406. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 E.cuniculi:118

F6Q4K7              	100.00%		Q8SWC9              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for Q8SWC9 as seed ortholog is 100%.

Group of orthologs #407. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 E.cuniculi:117

F6WZS8              	100.00%		Q8SVB5              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for Q8SVB5 as seed ortholog is 100%.

Group of orthologs #408. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 E.cuniculi:117

F7AX33              	100.00%		Q8SVD1              	100.00%
Bootstrap support for F7AX33 as seed ortholog is 100%.
Bootstrap support for Q8SVD1 as seed ortholog is 100%.

Group of orthologs #409. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 E.cuniculi:116

F6PR96              	100.00%		Q8SVC2              	100.00%
F6XGG4              	13.45%		
Bootstrap support for F6PR96 as seed ortholog is 56%.
Alternative seed ortholog is F6UHS2 (5 bits away from this cluster)
Bootstrap support for Q8SVC2 as seed ortholog is 100%.

Group of orthologs #410. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 E.cuniculi:116

F6PWP3              	100.00%		Q8SSE2              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for Q8SSE2 as seed ortholog is 100%.

Group of orthologs #411. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 E.cuniculi:116

F6XTV8              	100.00%		Q8SS71              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for Q8SS71 as seed ortholog is 100%.

Group of orthologs #412. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 E.cuniculi:115

F6ZN66              	100.00%		Q8SSF7              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for Q8SSF7 as seed ortholog is 100%.

Group of orthologs #413. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 E.cuniculi:114

F6R589              	100.00%		Q8SRV9              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for Q8SRV9 as seed ortholog is 100%.

Group of orthologs #414. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 E.cuniculi:114

F6V9A1              	100.00%		Q8SS53              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for Q8SS53 as seed ortholog is 100%.

Group of orthologs #415. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 E.cuniculi:114

F7BF26              	100.00%		Q8SQN5              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for Q8SQN5 as seed ortholog is 100%.

Group of orthologs #416. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 E.cuniculi:114

F7ATS3              	100.00%		Q8SVU3              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for Q8SVU3 as seed ortholog is 100%.

Group of orthologs #417. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 E.cuniculi:54

H2XLJ3              	100.00%		Q8SQH8              	100.00%
H2Y040              	40.16%		
F6TYN3              	35.25%		
H2Y3F2              	33.61%		
H2Y2F6              	28.69%		
H2Y1B6              	27.87%		
H2XPB8              	14.75%		
F7B124              	11.07%		
F6XGT0              	10.66%		
F6XBW4              	9.02%		
F6S959              	6.15%		
F6QE09              	5.74%		
Bootstrap support for H2XLJ3 as seed ortholog is 93%.
Bootstrap support for Q8SQH8 as seed ortholog is 99%.

Group of orthologs #418. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 E.cuniculi:113

H2XXH1              	100.00%		Q8SSC2              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for Q8SSC2 as seed ortholog is 100%.

Group of orthologs #419. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 E.cuniculi:113

Q967X2              	100.00%		Q8SR24              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for Q8SR24 as seed ortholog is 100%.

Group of orthologs #420. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 E.cuniculi:112

F6XDI5              	100.00%		Q8SR97              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for Q8SR97 as seed ortholog is 100%.

Group of orthologs #421. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 E.cuniculi:34

F6SBG8              	100.00%		Q8SSA5              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for Q8SSA5 as seed ortholog is 76%.

Group of orthologs #422. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 E.cuniculi:111

F6SNU1              	100.00%		Q8SRW8              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for Q8SRW8 as seed ortholog is 100%.

Group of orthologs #423. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 E.cuniculi:111

F6T8R8              	100.00%		Q8SR78              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for Q8SR78 as seed ortholog is 100%.

Group of orthologs #424. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 E.cuniculi:111

H2XJG6              	100.00%		Q8SRJ3              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for Q8SRJ3 as seed ortholog is 100%.

Group of orthologs #425. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 E.cuniculi:110

F6T485              	100.00%		Q8SUC6              	100.00%
Bootstrap support for F6T485 as seed ortholog is 100%.
Bootstrap support for Q8SUC6 as seed ortholog is 100%.

Group of orthologs #426. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 E.cuniculi:27

F6ZRB6              	100.00%		Q8SQP9              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 88%.
Bootstrap support for Q8SQP9 as seed ortholog is 85%.

Group of orthologs #427. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 E.cuniculi:109

F6TL19              	100.00%		Q8SRC4              	100.00%
Bootstrap support for F6TL19 as seed ortholog is 100%.
Bootstrap support for Q8SRC4 as seed ortholog is 100%.

Group of orthologs #428. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 E.cuniculi:109

F6TPA2              	100.00%		Q8SUY4              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for Q8SUY4 as seed ortholog is 100%.

Group of orthologs #429. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 E.cuniculi:109

F6WPS3              	100.00%		Q8STM7              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for Q8STM7 as seed ortholog is 100%.

Group of orthologs #430. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 E.cuniculi:109

H2XTF1              	100.00%		Q8SQK4              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for Q8SQK4 as seed ortholog is 100%.

Group of orthologs #431. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 E.cuniculi:109

H2XVJ2              	100.00%		Q8SRE9              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for Q8SRE9 as seed ortholog is 100%.

Group of orthologs #432. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 E.cuniculi:109

H2XSG4              	100.00%		Q8SW53              	100.00%
Bootstrap support for H2XSG4 as seed ortholog is 100%.
Bootstrap support for Q8SW53 as seed ortholog is 100%.

Group of orthologs #433. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 E.cuniculi:108

F6TA22              	100.00%		Q8SQM6              	100.00%
F6XFM9              	100.00%		Q8SRY6              	100.00%
Bootstrap support for F6TA22 as seed ortholog is 74%.
Alternative seed ortholog is F6ZUD7 (33 bits away from this cluster)
Bootstrap support for F6XFM9 as seed ortholog is 40%.
Alternative seed ortholog is F6ZUD7 (33 bits away from this cluster)
Bootstrap support for Q8SQM6 as seed ortholog is 100%.
Bootstrap support for Q8SRY6 as seed ortholog is 100%.

Group of orthologs #434. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 E.cuniculi:108

F6WQE3              	100.00%		Q8SUA2              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for Q8SUA2 as seed ortholog is 100%.

Group of orthologs #435. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 E.cuniculi:5

H2XMB6              	100.00%		Q8SSK8              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 61%.
Alternative seed ortholog is F6QZM4 (9 bits away from this cluster)
Bootstrap support for Q8SSK8 as seed ortholog is 57%.
Alternative seed ortholog is Q8SQR1 (5 bits away from this cluster)

Group of orthologs #436. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 E.cuniculi:107

F6QHP8              	100.00%		Q8SQS0              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for Q8SQS0 as seed ortholog is 100%.

Group of orthologs #437. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 E.cuniculi:107

F6PI87              	100.00%		Q8SVK1              	100.00%
Bootstrap support for F6PI87 as seed ortholog is 95%.
Bootstrap support for Q8SVK1 as seed ortholog is 100%.

Group of orthologs #438. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 E.cuniculi:107

F6YRR0              	100.00%		Q8SS16              	100.00%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for Q8SS16 as seed ortholog is 100%.

Group of orthologs #439. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:107

H2XXD0              	100.00%		Q8SV84              	100.00%
Bootstrap support for H2XXD0 as seed ortholog is 93%.
Bootstrap support for Q8SV84 as seed ortholog is 100%.

Group of orthologs #440. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 E.cuniculi:106

F6Z998              	100.00%		Q8SSF9              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for Q8SSF9 as seed ortholog is 100%.

Group of orthologs #441. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 E.cuniculi:105

F6QLU5              	100.00%		Q8SSI9              	100.00%
Bootstrap support for F6QLU5 as seed ortholog is 100%.
Bootstrap support for Q8SSI9 as seed ortholog is 100%.

Group of orthologs #442. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 E.cuniculi:105

F6XTQ1              	100.00%		Q8SVH1              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 81%.
Bootstrap support for Q8SVH1 as seed ortholog is 100%.

Group of orthologs #443. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:105

H2Y233              	100.00%		Q8SW46              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 99%.
Bootstrap support for Q8SW46 as seed ortholog is 100%.

Group of orthologs #444. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 E.cuniculi:104

F6W9T5              	100.00%		Q8SRW5              	100.00%
F6PQ74              	17.12%		
H2XSJ5              	11.69%		
H2XUU3              	5.64%		
Bootstrap support for F6W9T5 as seed ortholog is 100%.
Bootstrap support for Q8SRW5 as seed ortholog is 100%.

Group of orthologs #445. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 E.cuniculi:60

F6RQZ5              	100.00%		Q8SSD9              	100.00%
Bootstrap support for F6RQZ5 as seed ortholog is 100%.
Bootstrap support for Q8SSD9 as seed ortholog is 84%.

Group of orthologs #446. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 E.cuniculi:104

F6TRN8              	100.00%		Q8SRR8              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for Q8SRR8 as seed ortholog is 100%.

Group of orthologs #447. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 E.cuniculi:104

F6XCG6              	100.00%		Q8SVE1              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for Q8SVE1 as seed ortholog is 100%.

Group of orthologs #448. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 E.cuniculi:104

Q4H2R5              	100.00%		Q8SR92              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for Q8SR92 as seed ortholog is 100%.

Group of orthologs #449. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 E.cuniculi:104

Q1RPZ2              	100.00%		Q8SSB4              	100.00%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for Q8SSB4 as seed ortholog is 100%.

Group of orthologs #450. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 E.cuniculi:103

F7AEF7              	100.00%		Q8SRI8              	100.00%
F6TVX8              	100.00%		Q8SS69              	100.00%
F6YRW6              	26.03%		
F6YR14              	19.04%		
F6TBD1              	16.74%		
F6ZLA6              	15.14%		
F6X3U5              	9.98%		
H2XK10              	8.72%		
F6UQH1              	7.45%		
F6XFW8              	7.45%		
F6UQF7              	7.22%		
F6UQG4              	7.11%		
H2XMK9              	6.88%		
Bootstrap support for F7AEF7 as seed ortholog is 100%.
Bootstrap support for F6TVX8 as seed ortholog is 100%.
Bootstrap support for Q8SRI8 as seed ortholog is 100%.
Bootstrap support for Q8SS69 as seed ortholog is 100%.

Group of orthologs #451. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 E.cuniculi:103

F6WMZ2              	100.00%		Q8SSC0              	100.00%
Bootstrap support for F6WMZ2 as seed ortholog is 100%.
Bootstrap support for Q8SSC0 as seed ortholog is 100%.

Group of orthologs #452. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 E.cuniculi:102

F6TMG7              	100.00%		Q8SS44              	100.00%
F6PM82              	39.02%		
F7ASL8              	30.16%		
F6QRC2              	28.20%		
H2XW06              	22.62%		
F6SJC3              	16.07%		
F6V8I4              	16.07%		
F6WRZ9              	8.52%		
F7ASM9              	8.52%		
Bootstrap support for F6TMG7 as seed ortholog is 100%.
Bootstrap support for Q8SS44 as seed ortholog is 100%.

Group of orthologs #453. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 E.cuniculi:101

F7AMQ9              	100.00%		Q8SW72              	100.00%
F6XJ57              	26.85%		
H2XR17              	6.04%		
Bootstrap support for F7AMQ9 as seed ortholog is 100%.
Bootstrap support for Q8SW72 as seed ortholog is 100%.

Group of orthologs #454. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:101

H2XQ42              	100.00%		Q8STX3              	100.00%
H2Y0K9              	14.10%		
Bootstrap support for H2XQ42 as seed ortholog is 93%.
Bootstrap support for Q8STX3 as seed ortholog is 100%.

Group of orthologs #455. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 E.cuniculi:101

F6PJM3              	100.00%		Q8SV88              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 100%.
Bootstrap support for Q8SV88 as seed ortholog is 100%.

Group of orthologs #456. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 E.cuniculi:101

F6UW46              	100.00%		Q8SRX4              	100.00%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for Q8SRX4 as seed ortholog is 100%.

Group of orthologs #457. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 E.cuniculi:20

F6VKI2              	100.00%		Q8SVQ5              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 83%.
Bootstrap support for Q8SVQ5 as seed ortholog is 68%.
Alternative seed ortholog is Q8SW54 (20 bits away from this cluster)

Group of orthologs #458. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 E.cuniculi:100

F7AMW5              	100.00%		Q8SQL9              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for Q8SQL9 as seed ortholog is 100%.

Group of orthologs #459. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 E.cuniculi:100

F6ZQH5              	100.00%		Q8SUT3              	100.00%
Bootstrap support for F6ZQH5 as seed ortholog is 100%.
Bootstrap support for Q8SUT3 as seed ortholog is 100%.

Group of orthologs #460. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 E.cuniculi:100

H2XQJ8              	100.00%		Q8SRP4              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for Q8SRP4 as seed ortholog is 100%.

Group of orthologs #461. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:99

F6RK88              	100.00%		Q8STL1              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for Q8STL1 as seed ortholog is 100%.

Group of orthologs #462. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:99

F6SSS9              	100.00%		Q8SSI5              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for Q8SSI5 as seed ortholog is 100%.

Group of orthologs #463. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:99

F6TRZ2              	100.00%		Q8SSC1              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for Q8SSC1 as seed ortholog is 100%.

Group of orthologs #464. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:99

F6S7T3              	100.00%		Q8SWM3              	100.00%
Bootstrap support for F6S7T3 as seed ortholog is 100%.
Bootstrap support for Q8SWM3 as seed ortholog is 100%.

Group of orthologs #465. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 E.cuniculi:99

F6ZQX9              	100.00%		Q8SRD7              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for Q8SRD7 as seed ortholog is 100%.

Group of orthologs #466. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 E.cuniculi:98

F6YH10              	100.00%		Q8SRV4              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for Q8SRV4 as seed ortholog is 100%.

Group of orthologs #467. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 E.cuniculi:97

F7A1R5              	100.00%		Q8SQK6              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for Q8SQK6 as seed ortholog is 100%.

Group of orthologs #468. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 E.cuniculi:96

F6ZUK0              	100.00%		Q8SS00              	100.00%
Bootstrap support for F6ZUK0 as seed ortholog is 100%.
Bootstrap support for Q8SS00 as seed ortholog is 100%.

Group of orthologs #469. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 E.cuniculi:95

F6QWW6              	100.00%		Q8SR79              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for Q8SR79 as seed ortholog is 100%.

Group of orthologs #470. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 E.cuniculi:95

F6X8B5              	100.00%		Q8SS92              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for Q8SS92 as seed ortholog is 100%.

Group of orthologs #471. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 E.cuniculi:95

F6Z8S6              	100.00%		Q8SUE8              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 91%.
Bootstrap support for Q8SUE8 as seed ortholog is 100%.

Group of orthologs #472. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 E.cuniculi:94

F6TIY7              	100.00%		Q8SR30              	100.00%
F6WTG3              	26.26%		
Bootstrap support for F6TIY7 as seed ortholog is 100%.
Bootstrap support for Q8SR30 as seed ortholog is 100%.

Group of orthologs #473. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 E.cuniculi:94

F6QIV0              	100.00%		Q8SR32              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for Q8SR32 as seed ortholog is 100%.

Group of orthologs #474. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 E.cuniculi:42

F7AZA1              	100.00%		Q8SRG8              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 94%.
Bootstrap support for Q8SRG8 as seed ortholog is 96%.

Group of orthologs #475. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 E.cuniculi:94

H2XT24              	100.00%		Q8SRP7              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for Q8SRP7 as seed ortholog is 100%.

Group of orthologs #476. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 E.cuniculi:94

H2XUK0              	100.00%		Q8SSK7              	100.00%
Bootstrap support for H2XUK0 as seed ortholog is 100%.
Bootstrap support for Q8SSK7 as seed ortholog is 100%.

Group of orthologs #477. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 E.cuniculi:33

H2Y3L9              	100.00%		Q8SRL0              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for Q8SRL0 as seed ortholog is 97%.

Group of orthologs #478. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 E.cuniculi:93

F6WKP3              	100.00%		Q8STY7              	100.00%
                    	       		Q8SQZ5              	12.47%
Bootstrap support for F6WKP3 as seed ortholog is 71%.
Alternative seed ortholog is F6WR94 (14 bits away from this cluster)
Bootstrap support for Q8STY7 as seed ortholog is 100%.

Group of orthologs #479. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 E.cuniculi:93

F7A4X2              	100.00%		Q8SRP6              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for Q8SRP6 as seed ortholog is 100%.

Group of orthologs #480. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 E.cuniculi:92

F6ZIM0              	100.00%		Q8SS68              	100.00%
F6VKM8              	9.32%		
Bootstrap support for F6ZIM0 as seed ortholog is 100%.
Bootstrap support for Q8SS68 as seed ortholog is 100%.

Group of orthologs #481. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 E.cuniculi:92

F6YTX7              	100.00%		Q8STR5              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for Q8STR5 as seed ortholog is 100%.

Group of orthologs #482. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 E.cuniculi:91

F6R255              	100.00%		Q8SQS9              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for Q8SQS9 as seed ortholog is 100%.

Group of orthologs #483. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 E.cuniculi:91

F6SYB9              	100.00%		Q8STT8              	100.00%
Bootstrap support for F6SYB9 as seed ortholog is 95%.
Bootstrap support for Q8STT8 as seed ortholog is 100%.

Group of orthologs #484. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 E.cuniculi:91

F6UGM6              	100.00%		Q8SS76              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for Q8SS76 as seed ortholog is 100%.

Group of orthologs #485. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 E.cuniculi:91

F6X2C4              	100.00%		Q8SQT8              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for Q8SQT8 as seed ortholog is 100%.

Group of orthologs #486. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 E.cuniculi:91

F6Z2I4              	100.00%		Q8SVW9              	100.00%
Bootstrap support for F6Z2I4 as seed ortholog is 100%.
Bootstrap support for Q8SVW9 as seed ortholog is 100%.

Group of orthologs #487. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 E.cuniculi:91

F7AFF3              	100.00%		Q8SW52              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for Q8SW52 as seed ortholog is 100%.

Group of orthologs #488. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 E.cuniculi:90

F7BME9              	100.00%		Q8SR62              	100.00%
Bootstrap support for F7BME9 as seed ortholog is 100%.
Bootstrap support for Q8SR62 as seed ortholog is 100%.

Group of orthologs #489. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 E.cuniculi:90

F7BDK3              	100.00%		Q8SVS9              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for Q8SVS9 as seed ortholog is 100%.

Group of orthologs #490. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 E.cuniculi:90

H2XSI3              	100.00%		Q8SV19              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 100%.
Bootstrap support for Q8SV19 as seed ortholog is 100%.

Group of orthologs #491. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 E.cuniculi:89

F6QR08              	100.00%		Q8SRF3              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for Q8SRF3 as seed ortholog is 100%.

Group of orthologs #492. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 E.cuniculi:89

Q4H329              	100.00%		Q8SR74              	100.00%
Bootstrap support for Q4H329 as seed ortholog is 98%.
Bootstrap support for Q8SR74 as seed ortholog is 100%.

Group of orthologs #493. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 E.cuniculi:88

F6UAX0              	100.00%		Q8SW43              	100.00%
L7N0R2              	56.87%		
F6R6Q8              	43.65%		
H2Y1C2              	41.22%		
Q1RL67              	38.26%		
F6W0H5              	36.87%		
H2XZX8              	34.61%		
Q1RLF1              	34.43%		
H2Y260              	33.91%		
H2XX05              	30.96%		
F6RSE2              	30.09%		
Q1RL43              	27.83%		
Q1RLE9              	20.70%		
F6WPJ4              	20.00%		
Q1RL62              	19.48%		
F6QEX4              	18.09%		
F6TCA9              	16.87%		
F6VWP3              	16.87%		
H2XKK9              	16.35%		
F6SXL4              	14.09%		
H2XYP9              	13.22%		
Q1RLE2              	12.87%		
Q4H2L1              	12.17%		
F6UXM4              	11.65%		
H2XX10              	8.52%		
F6YI50              	7.48%		
H2XXK3              	6.78%		
F6U2I3              	5.74%		
Q1RLE5              	5.39%		
Bootstrap support for F6UAX0 as seed ortholog is 72%.
Alternative seed ortholog is H2XUP5 (21 bits away from this cluster)
Bootstrap support for Q8SW43 as seed ortholog is 100%.

Group of orthologs #494. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 E.cuniculi:29

F6SK29              	100.00%		Q8SRB0              	100.00%
H2XLI2              	7.16%		
F6ZM65              	6.81%		
F6SZ54              	6.47%		
Bootstrap support for F6SK29 as seed ortholog is 67%.
Alternative seed ortholog is F6W8G0 (18 bits away from this cluster)
Bootstrap support for Q8SRB0 as seed ortholog is 82%.

Group of orthologs #495. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 E.cuniculi:32

F7A726              	100.00%		Q8SS20              	100.00%
H2XV91              	33.09%		
Bootstrap support for F7A726 as seed ortholog is 75%.
Bootstrap support for Q8SS20 as seed ortholog is 89%.

Group of orthologs #496. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 E.cuniculi:88

F7BP82              	100.00%		Q8SQJ1              	100.00%
F7A686              	38.03%		
Bootstrap support for F7BP82 as seed ortholog is 78%.
Bootstrap support for Q8SQJ1 as seed ortholog is 100%.

Group of orthologs #497. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 E.cuniculi:88

F6Q9P1              	100.00%		Q8SUE1              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for Q8SUE1 as seed ortholog is 100%.

Group of orthologs #498. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 E.cuniculi:88

F7A4V3              	100.00%		Q8SVD8              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for Q8SVD8 as seed ortholog is 100%.

Group of orthologs #499. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 E.cuniculi:87

F6WPK3              	100.00%		Q8SUX1              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for Q8SUX1 as seed ortholog is 100%.

Group of orthologs #500. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 E.cuniculi:87

F6X2B6              	100.00%		Q8SUM3              	100.00%
Bootstrap support for F6X2B6 as seed ortholog is 89%.
Bootstrap support for Q8SUM3 as seed ortholog is 100%.

Group of orthologs #501. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 E.cuniculi:87

F6YU96              	100.00%		Q8SQP7              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for Q8SQP7 as seed ortholog is 100%.

Group of orthologs #502. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 E.cuniculi:87

F6YRM0              	100.00%		Q8SU09              	100.00%
Bootstrap support for F6YRM0 as seed ortholog is 65%.
Alternative seed ortholog is F7B946 (13 bits away from this cluster)
Bootstrap support for Q8SU09 as seed ortholog is 100%.

Group of orthologs #503. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 E.cuniculi:87

Q1RL41              	100.00%		Q8SVX7              	100.00%
Bootstrap support for Q1RL41 as seed ortholog is 86%.
Bootstrap support for Q8SVX7 as seed ortholog is 100%.

Group of orthologs #504. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 E.cuniculi:86

F6QSH0              	100.00%		Q8SWA2              	100.00%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for Q8SWA2 as seed ortholog is 100%.

Group of orthologs #505. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 E.cuniculi:86

F6Z010              	100.00%		Q8SV02              	100.00%
Bootstrap support for F6Z010 as seed ortholog is 61%.
Alternative seed ortholog is F6QAK1 (8 bits away from this cluster)
Bootstrap support for Q8SV02 as seed ortholog is 100%.

Group of orthologs #506. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 E.cuniculi:85

F6QH95              	100.00%		Q8SRN1              	100.00%
F6UNA3              	45.82%		
Bootstrap support for F6QH95 as seed ortholog is 100%.
Bootstrap support for Q8SRN1 as seed ortholog is 100%.

Group of orthologs #507. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 E.cuniculi:85

Q1RL34              	100.00%		Q8SSB6              	100.00%
H2XW94              	30.66%		
Bootstrap support for Q1RL34 as seed ortholog is 73%.
Alternative seed ortholog is F6TVS6 (28 bits away from this cluster)
Bootstrap support for Q8SSB6 as seed ortholog is 100%.

Group of orthologs #508. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 E.cuniculi:85

F6QNW0              	100.00%		Q8SSM3              	100.00%
Bootstrap support for F6QNW0 as seed ortholog is 100%.
Bootstrap support for Q8SSM3 as seed ortholog is 100%.

Group of orthologs #509. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 E.cuniculi:84

F6V437              	100.00%		Q8SSK4              	100.00%
Bootstrap support for F6V437 as seed ortholog is 100%.
Bootstrap support for Q8SSK4 as seed ortholog is 100%.

Group of orthologs #510. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 E.cuniculi:84

F7APY2              	100.00%		Q8SRN2              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for Q8SRN2 as seed ortholog is 100%.

Group of orthologs #511. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 E.cuniculi:84

H2XZQ0              	100.00%		Q8STV7              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 77%.
Bootstrap support for Q8STV7 as seed ortholog is 100%.

Group of orthologs #512. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 E.cuniculi:83

F7BQ69              	100.00%		Q8SWB8              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for Q8SWB8 as seed ortholog is 100%.

Group of orthologs #513. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 E.cuniculi:82

F6TA16              	100.00%		Q8SRA8              	100.00%
F6YRX9              	100.00%		
F6TK16              	26.15%		
H2XN77              	5.92%		
Bootstrap support for F6TA16 as seed ortholog is 77%.
Bootstrap support for F6YRX9 as seed ortholog is 86%.
Bootstrap support for Q8SRA8 as seed ortholog is 100%.

Group of orthologs #514. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 E.cuniculi:82

H2XV16              	100.00%		Q8SSD8              	100.00%
H2XMF7              	15.43%		
Bootstrap support for H2XV16 as seed ortholog is 100%.
Bootstrap support for Q8SSD8 as seed ortholog is 100%.

Group of orthologs #515. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 E.cuniculi:82

F6UAZ6              	100.00%		Q8SVJ2              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for Q8SVJ2 as seed ortholog is 100%.

Group of orthologs #516. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 E.cuniculi:82

F7A631              	100.00%		Q8STW4              	100.00%
Bootstrap support for F7A631 as seed ortholog is 100%.
Bootstrap support for Q8STW4 as seed ortholog is 100%.

Group of orthologs #517. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 E.cuniculi:82

H2XM46              	100.00%		Q8STW1              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for Q8STW1 as seed ortholog is 100%.

Group of orthologs #518. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 E.cuniculi:82

H2XZG0              	100.00%		Q8SRD9              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 97%.
Bootstrap support for Q8SRD9 as seed ortholog is 100%.

Group of orthologs #519. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:81

F6PH72              	100.00%		Q8SUA0              	100.00%
Bootstrap support for F6PH72 as seed ortholog is 100%.
Bootstrap support for Q8SUA0 as seed ortholog is 100%.

Group of orthologs #520. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:81

F6QEH8              	100.00%		Q8SU76              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for Q8SU76 as seed ortholog is 100%.

Group of orthologs #521. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:81

F6S2C6              	100.00%		Q8SR87              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for Q8SR87 as seed ortholog is 100%.

Group of orthologs #522. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:81

F6UJD6              	100.00%		Q8SWP6              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for Q8SWP6 as seed ortholog is 100%.

Group of orthologs #523. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:81

F6Y8T6              	100.00%		Q8SVL4              	100.00%
Bootstrap support for F6Y8T6 as seed ortholog is 100%.
Bootstrap support for Q8SVL4 as seed ortholog is 100%.

Group of orthologs #524. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 E.cuniculi:81

H2XQM2              	100.00%		I7JTZ5              	100.00%
Bootstrap support for H2XQM2 as seed ortholog is 100%.
Bootstrap support for I7JTZ5 as seed ortholog is 100%.

Group of orthologs #525. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 E.cuniculi:81

H2XR04              	100.00%		Q8SQX5              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 89%.
Bootstrap support for Q8SQX5 as seed ortholog is 100%.

Group of orthologs #526. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 E.cuniculi:80

F7AUU8              	100.00%		Q8STM6              	100.00%
Bootstrap support for F7AUU8 as seed ortholog is 100%.
Bootstrap support for Q8STM6 as seed ortholog is 100%.

Group of orthologs #527. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 E.cuniculi:80

H2Y2U8              	100.00%		Q8SUE9              	100.00%
Bootstrap support for H2Y2U8 as seed ortholog is 100%.
Bootstrap support for Q8SUE9 as seed ortholog is 100%.

Group of orthologs #528. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 E.cuniculi:25

F6QEE3              	100.00%		Q8SU39              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 85%.
Bootstrap support for Q8SU39 as seed ortholog is 78%.

Group of orthologs #529. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 E.cuniculi:79

F6UZU2              	100.00%		Q8SQK5              	100.00%
Bootstrap support for F6UZU2 as seed ortholog is 100%.
Bootstrap support for Q8SQK5 as seed ortholog is 100%.

Group of orthologs #530. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 E.cuniculi:79

F6VII3              	100.00%		Q8STW3              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for Q8STW3 as seed ortholog is 100%.

Group of orthologs #531. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 E.cuniculi:79

F6Z235              	100.00%		Q8SRE6              	100.00%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for Q8SRE6 as seed ortholog is 100%.

Group of orthologs #532. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 E.cuniculi:79

H2XVN4              	100.00%		Q8SV04              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for Q8SV04 as seed ortholog is 100%.

Group of orthologs #533. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 E.cuniculi:78

F6X0F3              	100.00%		Q8SWK0              	100.00%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for Q8SWK0 as seed ortholog is 100%.

Group of orthologs #534. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 E.cuniculi:78

F7BB49              	100.00%		Q8SVJ1              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for Q8SVJ1 as seed ortholog is 100%.

Group of orthologs #535. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 E.cuniculi:77

F6Z145              	100.00%		Q8SSA1              	100.00%
F7B1Z2              	49.68%		
F6TNN9              	21.92%		
F6XGK4              	19.32%		
F7BA12              	19.16%		
F6QZW1              	14.94%		
H2Y0K5              	8.77%		
H2Y1H5              	8.12%		
Bootstrap support for F6Z145 as seed ortholog is 77%.
Bootstrap support for Q8SSA1 as seed ortholog is 100%.

Group of orthologs #536. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 E.cuniculi:77

H2Y1V5              	100.00%		Q8SRF8              	100.00%
H2XZG7              	15.54%		
Bootstrap support for H2Y1V5 as seed ortholog is 37%.
Alternative seed ortholog is H2XXW6 (10 bits away from this cluster)
Bootstrap support for Q8SRF8 as seed ortholog is 100%.

Group of orthologs #537. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 E.cuniculi:77

F6RKZ8              	100.00%		Q8SVU8              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for Q8SVU8 as seed ortholog is 100%.

Group of orthologs #538. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 E.cuniculi:77

F6TCF8              	100.00%		Q8SW56              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for Q8SW56 as seed ortholog is 100%.

Group of orthologs #539. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 E.cuniculi:77

F6WII1              	100.00%		Q8SW23              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for Q8SW23 as seed ortholog is 100%.

Group of orthologs #540. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 E.cuniculi:77

F7ATY3              	100.00%		Q8SS37              	100.00%
Bootstrap support for F7ATY3 as seed ortholog is 100%.
Bootstrap support for Q8SS37 as seed ortholog is 100%.

Group of orthologs #541. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 E.cuniculi:77

F7B3M4              	100.00%		Q8SRT5              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for Q8SRT5 as seed ortholog is 100%.

Group of orthologs #542. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:76

F7B2Q7              	100.00%		Q8SRB5              	100.00%
F6S8B5              	20.12%		
Bootstrap support for F7B2Q7 as seed ortholog is 100%.
Bootstrap support for Q8SRB5 as seed ortholog is 100%.

Group of orthologs #543. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:76

H2XNW6              	100.00%		O62583              	100.00%
H2XLB1              	40.36%		
Bootstrap support for H2XNW6 as seed ortholog is 100%.
Bootstrap support for O62583 as seed ortholog is 100%.

Group of orthologs #544. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:76

F6SN27              	100.00%		Q8SS59              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for Q8SS59 as seed ortholog is 100%.

Group of orthologs #545. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:76

F6YHC8              	100.00%		Q8SSB2              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for Q8SSB2 as seed ortholog is 100%.

Group of orthologs #546. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:76

H2XSX2              	100.00%		Q8STQ4              	100.00%
Bootstrap support for H2XSX2 as seed ortholog is 100%.
Bootstrap support for Q8STQ4 as seed ortholog is 100%.

Group of orthologs #547. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 E.cuniculi:76

H2XX49              	100.00%		Q8SWD6              	100.00%
Bootstrap support for H2XX49 as seed ortholog is 100%.
Bootstrap support for Q8SWD6 as seed ortholog is 100%.

Group of orthologs #548. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 E.cuniculi:75

F6VQC2              	100.00%		Q8SSJ3              	100.00%
F6ZS71              	76.23%		
F6PPH5              	6.13%		
Bootstrap support for F6VQC2 as seed ortholog is 100%.
Bootstrap support for Q8SSJ3 as seed ortholog is 100%.

Group of orthologs #549. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 E.cuniculi:75

F6QBM2              	100.00%		Q8SRQ5              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for Q8SRQ5 as seed ortholog is 100%.

Group of orthologs #550. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 E.cuniculi:75

F7BLS5              	100.00%		Q8SRT7              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for Q8SRT7 as seed ortholog is 100%.

Group of orthologs #551. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 E.cuniculi:75

H2XW02              	100.00%		Q8SR04              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for Q8SR04 as seed ortholog is 100%.

Group of orthologs #552. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:74

F6V7V9              	100.00%		Q8SS70              	100.00%
H2XRC5              	30.11%		
Bootstrap support for F6V7V9 as seed ortholog is 100%.
Bootstrap support for Q8SS70 as seed ortholog is 100%.

Group of orthologs #553. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:74

F6PHR7              	100.00%		Q8SVZ0              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for Q8SVZ0 as seed ortholog is 100%.

Group of orthologs #554. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:74

F6PM75              	100.00%		Q8SVS4              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for Q8SVS4 as seed ortholog is 100%.

Group of orthologs #555. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:74

H2XZI3              	100.00%		I7KFW8              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for I7KFW8 as seed ortholog is 100%.

Group of orthologs #556. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:74

H2Y299              	100.00%		Q8SR46              	100.00%
Bootstrap support for H2Y299 as seed ortholog is 100%.
Bootstrap support for Q8SR46 as seed ortholog is 100%.

Group of orthologs #557. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 E.cuniculi:74

H2Y2A0              	100.00%		Q8SVE4              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for Q8SVE4 as seed ortholog is 100%.

Group of orthologs #558. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 E.cuniculi:73

F7A7T2              	100.00%		Q8SS88              	100.00%
F6V2S0              	17.08%		
H2XQR2              	13.66%		
F6XVZ5              	13.35%		
F6SZN1              	10.87%		
F6Y516              	7.76%		
Bootstrap support for F7A7T2 as seed ortholog is 100%.
Bootstrap support for Q8SS88 as seed ortholog is 100%.

Group of orthologs #559. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 E.cuniculi:73

F6PK54              	100.00%		Q8SRY3              	100.00%
Bootstrap support for F6PK54 as seed ortholog is 64%.
Alternative seed ortholog is F6Q3M5 (31 bits away from this cluster)
Bootstrap support for Q8SRY3 as seed ortholog is 100%.

Group of orthologs #560. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 E.cuniculi:73

F6RRS1              	100.00%		Q8SRL9              	100.00%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for Q8SRL9 as seed ortholog is 100%.

Group of orthologs #561. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 E.cuniculi:73

F6QDG1              	100.00%		Q8SVQ1              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for Q8SVQ1 as seed ortholog is 100%.

Group of orthologs #562. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 E.cuniculi:72

H2XPK9              	100.00%		Q8SRU2              	100.00%
F6X9C7              	58.61%		
H2XY34              	52.39%		
F6Y7T8              	33.49%		
F6VCD8              	16.03%		
F6SGH3              	9.09%		
Bootstrap support for H2XPK9 as seed ortholog is 100%.
Bootstrap support for Q8SRU2 as seed ortholog is 100%.

Group of orthologs #563. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 E.cuniculi:72

F6UK15              	100.00%		Q8SVS5              	100.00%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for Q8SVS5 as seed ortholog is 100%.

Group of orthologs #564. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 E.cuniculi:72

Q4H3E0              	100.00%		Q8SRN7              	100.00%
Bootstrap support for Q4H3E0 as seed ortholog is 100%.
Bootstrap support for Q8SRN7 as seed ortholog is 100%.

Group of orthologs #565. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 E.cuniculi:71

F6Q521              	100.00%		Q8STK5              	100.00%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for Q8STK5 as seed ortholog is 100%.

Group of orthologs #566. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 E.cuniculi:71

F6THW7              	100.00%		Q8SSD1              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 100%.
Bootstrap support for Q8SSD1 as seed ortholog is 100%.

Group of orthologs #567. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 E.cuniculi:71

F6TX35              	100.00%		Q8SSG4              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for Q8SSG4 as seed ortholog is 100%.

Group of orthologs #568. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 E.cuniculi:27

F6XPS9              	100.00%		Q8SRS0              	100.00%
Bootstrap support for F6XPS9 as seed ortholog is 100%.
Bootstrap support for Q8SRS0 as seed ortholog is 91%.

Group of orthologs #569. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 E.cuniculi:71

F6ZCL3              	100.00%		Q8SWH1              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for Q8SWH1 as seed ortholog is 100%.

Group of orthologs #570. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 E.cuniculi:70

F6Q4X5              	100.00%		Q8SR91              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for Q8SR91 as seed ortholog is 100%.

Group of orthologs #571. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 E.cuniculi:70

F7BHW5              	100.00%		Q8SRS3              	100.00%
Bootstrap support for F7BHW5 as seed ortholog is 100%.
Bootstrap support for Q8SRS3 as seed ortholog is 100%.

Group of orthologs #572. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:69

F6Q484              	100.00%		Q8SQS8              	100.00%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for Q8SQS8 as seed ortholog is 100%.

Group of orthologs #573. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:69

F6UPC7              	100.00%		Q8SRY5              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for Q8SRY5 as seed ortholog is 100%.

Group of orthologs #574. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:69

F6V1A9              	100.00%		Q8SVU4              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for Q8SVU4 as seed ortholog is 100%.

Group of orthologs #575. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:69

F6YF30              	100.00%		Q8SRH5              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for Q8SRH5 as seed ortholog is 100%.

Group of orthologs #576. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 E.cuniculi:69

H2Y060              	100.00%		Q8SRN5              	100.00%
Bootstrap support for H2Y060 as seed ortholog is 71%.
Alternative seed ortholog is F6XDP4 (15 bits away from this cluster)
Bootstrap support for Q8SRN5 as seed ortholog is 100%.

Group of orthologs #577. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 E.cuniculi:23

Q1RPU6              	100.00%		Q8SSB3              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for Q8SSB3 as seed ortholog is 82%.

Group of orthologs #578. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 E.cuniculi:68

F6VEB2              	100.00%		Q8STN6              	100.00%
F6WTM4              	5.81%		
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for Q8STN6 as seed ortholog is 100%.

Group of orthologs #579. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 E.cuniculi:68

F6YBU7              	100.00%		Q8SS25              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for Q8SS25 as seed ortholog is 100%.

Group of orthologs #580. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6Y089              	100.00%		Q8SS24              	100.00%
                    	       		Q8SRX0              	7.89%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for Q8SS24 as seed ortholog is 100%.

Group of orthologs #581. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F7ATN8              	100.00%		Q8SSI6              	100.00%
L7N0T0              	8.10%		
Bootstrap support for F7ATN8 as seed ortholog is 100%.
Bootstrap support for Q8SSI6 as seed ortholog is 100%.

Group of orthologs #582. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6QY24              	100.00%		Q8SRE8              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for Q8SRE8 as seed ortholog is 100%.

Group of orthologs #583. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6SEF1              	100.00%		Q8SSF8              	100.00%
Bootstrap support for F6SEF1 as seed ortholog is 100%.
Bootstrap support for Q8SSF8 as seed ortholog is 100%.

Group of orthologs #584. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6UG66              	100.00%		Q8SRJ2              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for Q8SRJ2 as seed ortholog is 100%.

Group of orthologs #585. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6U3F2              	100.00%		Q8SWE3              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for Q8SWE3 as seed ortholog is 100%.

Group of orthologs #586. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6WH15              	100.00%		Q8SR06              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for Q8SR06 as seed ortholog is 100%.

Group of orthologs #587. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F6Z897              	100.00%		Q8SRU1              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for Q8SRU1 as seed ortholog is 100%.

Group of orthologs #588. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

F7BKI1              	100.00%		Q8SUX2              	100.00%
Bootstrap support for F7BKI1 as seed ortholog is 100%.
Bootstrap support for Q8SUX2 as seed ortholog is 100%.

Group of orthologs #589. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 E.cuniculi:67

H2XV35              	100.00%		Q8STR7              	100.00%
Bootstrap support for H2XV35 as seed ortholog is 100%.
Bootstrap support for Q8STR7 as seed ortholog is 100%.

Group of orthologs #590. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 E.cuniculi:66

F6RAN6              	100.00%		Q8SWN7              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for Q8SWN7 as seed ortholog is 100%.

Group of orthologs #591. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 E.cuniculi:66

F6YFR8              	100.00%		Q8STQ5              	100.00%
Bootstrap support for F6YFR8 as seed ortholog is 100%.
Bootstrap support for Q8STQ5 as seed ortholog is 100%.

Group of orthologs #592. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 E.cuniculi:66

F6YNR7              	100.00%		Q8STN9              	100.00%
Bootstrap support for F6YNR7 as seed ortholog is 81%.
Bootstrap support for Q8STN9 as seed ortholog is 100%.

Group of orthologs #593. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 E.cuniculi:65

F6TKH9              	100.00%		Q8SQN4              	100.00%
F6V2B2              	10.70%		
Bootstrap support for F6TKH9 as seed ortholog is 100%.
Bootstrap support for Q8SQN4 as seed ortholog is 100%.

Group of orthologs #594. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 E.cuniculi:65

F6U8Q9              	100.00%		Q8SVG5              	100.00%
Bootstrap support for F6U8Q9 as seed ortholog is 100%.
Bootstrap support for Q8SVG5 as seed ortholog is 100%.

Group of orthologs #595. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 E.cuniculi:64

H2XQT4              	100.00%		Q8SS66              	100.00%
F7AM82              	31.33%		
F6QL68              	20.83%		
F6XIK7              	18.83%		
H2XL49              	16.50%		
F6W4M3              	16.33%		
F7AGL2              	16.17%		
F6TGU6              	14.50%		
H2Y1M2              	13.33%		
F6QJI6              	12.50%		
F7A0I1              	11.50%		
Bootstrap support for H2XQT4 as seed ortholog is 100%.
Bootstrap support for Q8SS66 as seed ortholog is 100%.

Group of orthologs #596. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 E.cuniculi:64

F6QST8              	100.00%		Q8SWG0              	100.00%
Bootstrap support for F6QST8 as seed ortholog is 55%.
Alternative seed ortholog is F6QMU4 (4 bits away from this cluster)
Bootstrap support for Q8SWG0 as seed ortholog is 100%.

Group of orthologs #597. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 E.cuniculi:64

F6VLH4              	100.00%		Q8SWN5              	100.00%
Bootstrap support for F6VLH4 as seed ortholog is 100%.
Bootstrap support for Q8SWN5 as seed ortholog is 100%.

Group of orthologs #598. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 E.cuniculi:64

F6YSI2              	100.00%		Q8SR93              	100.00%
Bootstrap support for F6YSI2 as seed ortholog is 100%.
Bootstrap support for Q8SR93 as seed ortholog is 100%.

Group of orthologs #599. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 E.cuniculi:64

H2XK44              	100.00%		Q8SSD0              	100.00%
Bootstrap support for H2XK44 as seed ortholog is 100%.
Bootstrap support for Q8SSD0 as seed ortholog is 100%.

Group of orthologs #600. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:63

F6W282              	100.00%		Q8SRN6              	100.00%
Bootstrap support for F6W282 as seed ortholog is 100%.
Bootstrap support for Q8SRN6 as seed ortholog is 100%.

Group of orthologs #601. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:63

F6VXS0              	100.00%		Q8SSC3              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for Q8SSC3 as seed ortholog is 100%.

Group of orthologs #602. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:63

F6XIG6              	100.00%		Q8SRC5              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for Q8SRC5 as seed ortholog is 100%.

Group of orthologs #603. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 E.cuniculi:63

F7B670              	100.00%		Q8SUZ0              	100.00%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for Q8SUZ0 as seed ortholog is 100%.

Group of orthologs #604. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 E.cuniculi:62

F6WUF6              	100.00%		Q8SWM0              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 81%.
Bootstrap support for Q8SWM0 as seed ortholog is 100%.

Group of orthologs #605. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 E.cuniculi:62

F7B4V3              	100.00%		Q8SRB6              	100.00%
Bootstrap support for F7B4V3 as seed ortholog is 100%.
Bootstrap support for Q8SRB6 as seed ortholog is 100%.

Group of orthologs #606. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 E.cuniculi:61

F6PN13              	100.00%		Q8SQU4              	100.00%
F6ZFY8              	10.83%		
Bootstrap support for F6PN13 as seed ortholog is 100%.
Bootstrap support for Q8SQU4 as seed ortholog is 100%.

Group of orthologs #607. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 E.cuniculi:61

F6UTS4              	100.00%		Q8SSG5              	100.00%
Bootstrap support for F6UTS4 as seed ortholog is 100%.
Bootstrap support for Q8SSG5 as seed ortholog is 100%.

Group of orthologs #608. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 E.cuniculi:61

H2XR58              	100.00%		Q8SU80              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for Q8SU80 as seed ortholog is 100%.

Group of orthologs #609. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 E.cuniculi:61

H2XU65              	100.00%		Q8STQ1              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for Q8STQ1 as seed ortholog is 100%.

Group of orthologs #610. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 E.cuniculi:19

H2XZL8              	100.00%		Q8SSM1              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for Q8SSM1 as seed ortholog is 81%.

Group of orthologs #611. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 E.cuniculi:60

F6UUI1              	100.00%		Q8SRF9              	100.00%
H2XLK7              	33.33%		
H2XME3              	16.86%		
Bootstrap support for F6UUI1 as seed ortholog is 100%.
Bootstrap support for Q8SRF9 as seed ortholog is 100%.

Group of orthologs #612. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 E.cuniculi:60

F6U3C1              	100.00%		Q8SR73              	100.00%
Bootstrap support for F6U3C1 as seed ortholog is 100%.
Bootstrap support for Q8SR73 as seed ortholog is 100%.

Group of orthologs #613. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 E.cuniculi:60

F6ZQ58              	100.00%		Q8SRD3              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for Q8SRD3 as seed ortholog is 100%.

Group of orthologs #614. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 E.cuniculi:60

H2XKS6              	100.00%		Q8SSA2              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for Q8SSA2 as seed ortholog is 100%.

Group of orthologs #615. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 E.cuniculi:59

H2XKD1              	100.00%		Q8SU17              	100.00%
F6YLI3              	40.76%		
H2XUD0              	29.85%		
Bootstrap support for H2XKD1 as seed ortholog is 100%.
Bootstrap support for Q8SU17 as seed ortholog is 100%.

Group of orthologs #616. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 E.cuniculi:59

F6SST4              	100.00%		Q8SWJ3              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for Q8SWJ3 as seed ortholog is 100%.

Group of orthologs #617. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 E.cuniculi:59

H2XMJ7              	100.00%		Q8SR15              	100.00%
Bootstrap support for H2XMJ7 as seed ortholog is 100%.
Bootstrap support for Q8SR15 as seed ortholog is 100%.

Group of orthologs #618. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 E.cuniculi:59

H2XSZ1              	100.00%		Q8SQK1              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for Q8SQK1 as seed ortholog is 100%.

Group of orthologs #619. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 E.cuniculi:59

H2XRE3              	100.00%		Q8SWI7              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for Q8SWI7 as seed ortholog is 100%.

Group of orthologs #620. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 E.cuniculi:58

F6X139              	100.00%		Q8SSH0              	100.00%
F6X7G6              	29.84%		
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for Q8SSH0 as seed ortholog is 100%.

Group of orthologs #621. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 E.cuniculi:58

F6YMZ5              	100.00%		Q8SQM2              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for Q8SQM2 as seed ortholog is 100%.

Group of orthologs #622. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 E.cuniculi:58

F6ZPU3              	100.00%		Q8SU25              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for Q8SU25 as seed ortholog is 100%.

Group of orthologs #623. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 E.cuniculi:58

H2XRI7              	100.00%		Q8SU59              	100.00%
Bootstrap support for H2XRI7 as seed ortholog is 100%.
Bootstrap support for Q8SU59 as seed ortholog is 100%.

Group of orthologs #624. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:57

F6Y3J4              	100.00%		Q8SRK2              	100.00%
F7AXY8              	6.72%		
F6YVW8              	6.51%		
H2Y0E6              	6.07%		
Bootstrap support for F6Y3J4 as seed ortholog is 100%.
Bootstrap support for Q8SRK2 as seed ortholog is 100%.

Group of orthologs #625. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:57

F6QS20              	100.00%		Q8SR64              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for Q8SR64 as seed ortholog is 100%.

Group of orthologs #626. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:57

F6PKD1              	100.00%		Q8SV89              	100.00%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for Q8SV89 as seed ortholog is 100%.

Group of orthologs #627. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:57

F6ZZX7              	100.00%		Q8SVI0              	100.00%
Bootstrap support for F6ZZX7 as seed ortholog is 100%.
Bootstrap support for Q8SVI0 as seed ortholog is 100%.

Group of orthologs #628. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:57

H2XKD8              	100.00%		I7JTZ6              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for I7JTZ6 as seed ortholog is 100%.

Group of orthologs #629. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 E.cuniculi:57

H2XWE7              	100.00%		Q8SSF3              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for Q8SSF3 as seed ortholog is 100%.

Group of orthologs #630. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 E.cuniculi:56

F6W0T2              	100.00%		Q8SQN0              	100.00%
H2XR06              	5.77%		
Bootstrap support for F6W0T2 as seed ortholog is 100%.
Bootstrap support for Q8SQN0 as seed ortholog is 100%.

Group of orthologs #631. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 E.cuniculi:56

F6VJL7              	100.00%		Q8SS64              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for Q8SS64 as seed ortholog is 100%.

Group of orthologs #632. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 E.cuniculi:56

F6WWW4              	100.00%		Q8SW87              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for Q8SW87 as seed ortholog is 100%.

Group of orthologs #633. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 E.cuniculi:12

F6YF45              	100.00%		Q8SSB9              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 59%.
Alternative seed ortholog is H2Y1I9 (3 bits away from this cluster)
Bootstrap support for Q8SSB9 as seed ortholog is 79%.

Group of orthologs #634. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 E.cuniculi:55

F6T8A4              	100.00%		Q8SUJ5              	100.00%
Bootstrap support for F6T8A4 as seed ortholog is 100%.
Bootstrap support for Q8SUJ5 as seed ortholog is 100%.

Group of orthologs #635. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 E.cuniculi:55

F6U1Q3              	100.00%		Q8SVG7              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 100%.
Bootstrap support for Q8SVG7 as seed ortholog is 100%.

Group of orthologs #636. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 E.cuniculi:55

F6YLQ9              	100.00%		Q8SSD7              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for Q8SSD7 as seed ortholog is 100%.

Group of orthologs #637. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 E.cuniculi:55

H2XTD6              	100.00%		Q8SVM3              	100.00%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for Q8SVM3 as seed ortholog is 100%.

Group of orthologs #638. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 E.cuniculi:55

H2XZ76              	100.00%		Q8SUE2              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for Q8SUE2 as seed ortholog is 100%.

Group of orthologs #639. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 E.cuniculi:54

F6QIH1              	100.00%		Q8SQR7              	100.00%
F6YSN1              	11.70%		Q8SQR6              	39.33%
Bootstrap support for F6QIH1 as seed ortholog is 100%.
Bootstrap support for Q8SQR7 as seed ortholog is 100%.

Group of orthologs #640. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 E.cuniculi:54

Q4H3C9              	100.00%		Q8SW18              	100.00%
Q4H3C8              	5.06%		
Bootstrap support for Q4H3C9 as seed ortholog is 100%.
Bootstrap support for Q8SW18 as seed ortholog is 100%.

Group of orthologs #641. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 E.cuniculi:54

F6VIC3              	100.00%		Q8SQX9              	100.00%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for Q8SQX9 as seed ortholog is 100%.

Group of orthologs #642. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 E.cuniculi:54

F6V6R4              	100.00%		Q8SVY0              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for Q8SVY0 as seed ortholog is 100%.

Group of orthologs #643. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 E.cuniculi:53

F6RXW9              	100.00%		Q8SRH9              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for Q8SRH9 as seed ortholog is 100%.

Group of orthologs #644. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 E.cuniculi:53

Q8I7D9              	100.00%		Q8SRW9              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for Q8SRW9 as seed ortholog is 100%.

Group of orthologs #645. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 E.cuniculi:52

F6UMM5              	100.00%		Q8STZ6              	100.00%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for Q8STZ6 as seed ortholog is 100%.

Group of orthologs #646. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 E.cuniculi:52

H2XTG7              	100.00%		I7JU08              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for I7JU08 as seed ortholog is 100%.

Group of orthologs #647. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 E.cuniculi:51

F6R4R6              	100.00%		Q8SU35              	100.00%
H2XU97              	21.88%		
Bootstrap support for F6R4R6 as seed ortholog is 100%.
Bootstrap support for Q8SU35 as seed ortholog is 100%.

Group of orthologs #648. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 E.cuniculi:51

F7BK44              	100.00%		Q8SS17              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for Q8SS17 as seed ortholog is 100%.

Group of orthologs #649. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 E.cuniculi:51

H2XZ38              	100.00%		Q8SUA3              	100.00%
Bootstrap support for H2XZ38 as seed ortholog is 100%.
Bootstrap support for Q8SUA3 as seed ortholog is 100%.

Group of orthologs #650. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 E.cuniculi:50

F6T957              	100.00%		Q8SQL2              	100.00%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for Q8SQL2 as seed ortholog is 100%.

Group of orthologs #651. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 E.cuniculi:50

F6WUG3              	100.00%		Q8SRU6              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for Q8SRU6 as seed ortholog is 100%.

Group of orthologs #652. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 E.cuniculi:50

F6XW35              	100.00%		I7L8P7              	100.00%
Bootstrap support for F6XW35 as seed ortholog is 100%.
Bootstrap support for I7L8P7 as seed ortholog is 100%.

Group of orthologs #653. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 E.cuniculi:50

H2Y1C3              	100.00%		Q8SWK9              	100.00%
Bootstrap support for H2Y1C3 as seed ortholog is 100%.
Bootstrap support for Q8SWK9 as seed ortholog is 100%.

Group of orthologs #654. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

F7AX27              	100.00%		Q8SRE4              	100.00%
H2XW88              	31.94%		
Bootstrap support for F7AX27 as seed ortholog is 100%.
Bootstrap support for Q8SRE4 as seed ortholog is 100%.

Group of orthologs #655. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

Q1RLG5              	100.00%		Q8SRY4              	100.00%
H2XM63              	5.01%		
Bootstrap support for Q1RLG5 as seed ortholog is 100%.
Bootstrap support for Q8SRY4 as seed ortholog is 100%.

Group of orthologs #656. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

F6WZ37              	100.00%		Q8SQP8              	100.00%
Bootstrap support for F6WZ37 as seed ortholog is 100%.
Bootstrap support for Q8SQP8 as seed ortholog is 100%.

Group of orthologs #657. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

F6Y4R6              	100.00%		Q8SUS2              	100.00%
Bootstrap support for F6Y4R6 as seed ortholog is 100%.
Bootstrap support for Q8SUS2 as seed ortholog is 100%.

Group of orthologs #658. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

F7ANQ7              	100.00%		Q8SVU7              	100.00%
Bootstrap support for F7ANQ7 as seed ortholog is 100%.
Bootstrap support for Q8SVU7 as seed ortholog is 100%.

Group of orthologs #659. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

H2XKM5              	100.00%		Q8SS03              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for Q8SS03 as seed ortholog is 100%.

Group of orthologs #660. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 E.cuniculi:49

H2XTC9              	100.00%		Q8SRK5              	100.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for Q8SRK5 as seed ortholog is 100%.

Group of orthologs #661. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 E.cuniculi:48

F6R0P0              	100.00%		Q8SQX6              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for Q8SQX6 as seed ortholog is 100%.

Group of orthologs #662. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:47

F6UAX7              	100.00%		Q8SRX8              	100.00%
H2XQB0              	5.21%		
Bootstrap support for F6UAX7 as seed ortholog is 100%.
Bootstrap support for Q8SRX8 as seed ortholog is 100%.

Group of orthologs #663. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:47

F6SD13              	100.00%		Q8SS73              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for Q8SS73 as seed ortholog is 100%.

Group of orthologs #664. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:47

F6U8W0              	100.00%		Q8SVK9              	100.00%
Bootstrap support for F6U8W0 as seed ortholog is 100%.
Bootstrap support for Q8SVK9 as seed ortholog is 100%.

Group of orthologs #665. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 E.cuniculi:47

H2XPE3              	100.00%		Q8SV74              	100.00%
Bootstrap support for H2XPE3 as seed ortholog is 100%.
Bootstrap support for Q8SV74 as seed ortholog is 100%.

Group of orthologs #666. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 E.cuniculi:46

F6PPJ7              	100.00%		Q8SUU2              	100.00%
                    	       		Q8STI4              	100.00%
Bootstrap support for F6PPJ7 as seed ortholog is 100%.
Bootstrap support for Q8SUU2 as seed ortholog is 100%.
Bootstrap support for Q8STI4 as seed ortholog is 100%.

Group of orthologs #667. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 E.cuniculi:46

F6YUN5              	100.00%		Q8SV39              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for Q8SV39 as seed ortholog is 100%.

Group of orthologs #668. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:45

F6QGB8              	100.00%		I7IV38              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for I7IV38 as seed ortholog is 100%.

Group of orthologs #669. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:45

F6R4H7              	100.00%		Q8SR28              	100.00%
Bootstrap support for F6R4H7 as seed ortholog is 100%.
Bootstrap support for Q8SR28 as seed ortholog is 100%.

Group of orthologs #670. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:45

F6W7Q3              	100.00%		Q8SSC8              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for Q8SSC8 as seed ortholog is 100%.

Group of orthologs #671. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:45

F6YD02              	100.00%		Q8STT5              	100.00%
Bootstrap support for F6YD02 as seed ortholog is 100%.
Bootstrap support for Q8STT5 as seed ortholog is 100%.

Group of orthologs #672. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:45

F6YXI8              	100.00%		Q8SWB4              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for Q8SWB4 as seed ortholog is 100%.

Group of orthologs #673. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:45

H2XJI9              	100.00%		Q8SRS7              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for Q8SRS7 as seed ortholog is 100%.

Group of orthologs #674. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 E.cuniculi:1

H2XSA5              	100.00%		Q8SRP0              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for Q8SRP0 as seed ortholog is 53%.
Alternative seed ortholog is Q8SS46 (1 bits away from this cluster)

Group of orthologs #675. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 E.cuniculi:2

H2XL05              	100.00%		Q8SRU9              	100.00%
F6YVQ1              	6.94%		
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for Q8SRU9 as seed ortholog is 54%.
Alternative seed ortholog is I7JU03 (2 bits away from this cluster)

Group of orthologs #676. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 E.cuniculi:44

F7B7K2              	100.00%		Q8SRP1              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for Q8SRP1 as seed ortholog is 100%.

Group of orthologs #677. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 E.cuniculi:43

H2XKA1              	100.00%		Q8SSF1              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for Q8SSF1 as seed ortholog is 100%.

Group of orthologs #678. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 E.cuniculi:42

F6SAX8              	100.00%		Q8SSK9              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for Q8SSK9 as seed ortholog is 100%.

Group of orthologs #679. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 E.cuniculi:42

F7B376              	100.00%		Q8SV34              	100.00%
Bootstrap support for F7B376 as seed ortholog is 100%.
Bootstrap support for Q8SV34 as seed ortholog is 100%.

Group of orthologs #680. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 E.cuniculi:41

F6QI05              	100.00%		Q8SSG3              	100.00%
F6RLX1              	39.24%		
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for Q8SSG3 as seed ortholog is 100%.

Group of orthologs #681. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 E.cuniculi:41

H2XT70              	100.00%		O96720              	100.00%
Bootstrap support for H2XT70 as seed ortholog is 100%.
Bootstrap support for O96720 as seed ortholog is 100%.