###################################
2221 groups of orthologs
2406 in-paralogs from C.immitis
3122 in-paralogs from D.pseudoobscura
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 4315 bits
Score difference with first non-orthologous sequence - C.immitis:4315 D.pseudoobscura:2981

J3K2G8              	100.00%		Q29EA0              	100.00%
Bootstrap support for J3K2G8 as seed ortholog is 100%.
Bootstrap support for Q29EA0 as seed ortholog is 100%.

Group of orthologs #2. Best score 3616 bits
Score difference with first non-orthologous sequence - C.immitis:3616 D.pseudoobscura:3616

J3KE84              	100.00%		Q293E2              	100.00%
Bootstrap support for J3KE84 as seed ortholog is 100%.
Bootstrap support for Q293E2 as seed ortholog is 100%.

Group of orthologs #3. Best score 2238 bits
Score difference with first non-orthologous sequence - C.immitis:2238 D.pseudoobscura:2238

J3KLW0              	100.00%		Q29EX1              	100.00%
Bootstrap support for J3KLW0 as seed ortholog is 100%.
Bootstrap support for Q29EX1 as seed ortholog is 100%.

Group of orthologs #4. Best score 2087 bits
Score difference with first non-orthologous sequence - C.immitis:2087 D.pseudoobscura:2087

J3K0W1              	100.00%		Q29HK5              	100.00%
Bootstrap support for J3K0W1 as seed ortholog is 100%.
Bootstrap support for Q29HK5 as seed ortholog is 100%.

Group of orthologs #5. Best score 2054 bits
Score difference with first non-orthologous sequence - C.immitis:2054 D.pseudoobscura:2054

J3KL43              	100.00%		Q2M0I9              	100.00%
Bootstrap support for J3KL43 as seed ortholog is 100%.
Bootstrap support for Q2M0I9 as seed ortholog is 100%.

Group of orthologs #6. Best score 1791 bits
Score difference with first non-orthologous sequence - C.immitis:1791 D.pseudoobscura:1791

J3K0E8              	100.00%		Q29CS2              	100.00%
Bootstrap support for J3K0E8 as seed ortholog is 100%.
Bootstrap support for Q29CS2 as seed ortholog is 100%.

Group of orthologs #7. Best score 1779 bits
Score difference with first non-orthologous sequence - C.immitis:1779 D.pseudoobscura:1779

J3KHY4              	100.00%		Q290Y2              	100.00%
Bootstrap support for J3KHY4 as seed ortholog is 100%.
Bootstrap support for Q290Y2 as seed ortholog is 100%.

Group of orthologs #8. Best score 1654 bits
Score difference with first non-orthologous sequence - C.immitis:1654 D.pseudoobscura:1654

J3KDR3              	100.00%		Q29L62              	100.00%
Bootstrap support for J3KDR3 as seed ortholog is 100%.
Bootstrap support for Q29L62 as seed ortholog is 100%.

Group of orthologs #9. Best score 1642 bits
Score difference with first non-orthologous sequence - C.immitis:941 D.pseudoobscura:1642

J3KB55              	100.00%		Q29IN2              	100.00%
Bootstrap support for J3KB55 as seed ortholog is 100%.
Bootstrap support for Q29IN2 as seed ortholog is 100%.

Group of orthologs #10. Best score 1617 bits
Score difference with first non-orthologous sequence - C.immitis:1617 D.pseudoobscura:1617

J3KKJ9              	100.00%		Q29BI3              	100.00%
Bootstrap support for J3KKJ9 as seed ortholog is 100%.
Bootstrap support for Q29BI3 as seed ortholog is 100%.

Group of orthologs #11. Best score 1609 bits
Score difference with first non-orthologous sequence - C.immitis:1609 D.pseudoobscura:1609

J3K1U1              	100.00%		Q29AT2              	100.00%
Bootstrap support for J3K1U1 as seed ortholog is 100%.
Bootstrap support for Q29AT2 as seed ortholog is 100%.

Group of orthologs #12. Best score 1442 bits
Score difference with first non-orthologous sequence - C.immitis:1442 D.pseudoobscura:1442

J3KFX8              	100.00%		B5DYZ6              	100.00%
Bootstrap support for J3KFX8 as seed ortholog is 100%.
Bootstrap support for B5DYZ6 as seed ortholog is 100%.

Group of orthologs #13. Best score 1374 bits
Score difference with first non-orthologous sequence - C.immitis:1374 D.pseudoobscura:1374

J3K4V5              	100.00%		Q298X6              	100.00%
Bootstrap support for J3K4V5 as seed ortholog is 100%.
Bootstrap support for Q298X6 as seed ortholog is 100%.

Group of orthologs #14. Best score 1365 bits
Score difference with first non-orthologous sequence - C.immitis:1365 D.pseudoobscura:1365

J0HGE5              	100.00%		B5DI06              	100.00%
Bootstrap support for J0HGE5 as seed ortholog is 100%.
Bootstrap support for B5DI06 as seed ortholog is 100%.

Group of orthologs #15. Best score 1296 bits
Score difference with first non-orthologous sequence - C.immitis:1296 D.pseudoobscura:1296

J3K8D2              	100.00%		Q28ZV6              	100.00%
Bootstrap support for J3K8D2 as seed ortholog is 100%.
Bootstrap support for Q28ZV6 as seed ortholog is 100%.

Group of orthologs #16. Best score 1289 bits
Score difference with first non-orthologous sequence - C.immitis:852 D.pseudoobscura:779

J3KHR5              	100.00%		Q292F4              	100.00%
Bootstrap support for J3KHR5 as seed ortholog is 100%.
Bootstrap support for Q292F4 as seed ortholog is 100%.

Group of orthologs #17. Best score 1275 bits
Score difference with first non-orthologous sequence - C.immitis:932 D.pseudoobscura:1275

J3K0E9              	100.00%		Q28XA7              	100.00%
Bootstrap support for J3K0E9 as seed ortholog is 100%.
Bootstrap support for Q28XA7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1265 bits
Score difference with first non-orthologous sequence - C.immitis:1265 D.pseudoobscura:1265

J3KI95              	100.00%		Q28ZL4              	100.00%
Bootstrap support for J3KI95 as seed ortholog is 100%.
Bootstrap support for Q28ZL4 as seed ortholog is 100%.

Group of orthologs #19. Best score 1170 bits
Score difference with first non-orthologous sequence - C.immitis:1170 D.pseudoobscura:1170

I9NPD7              	100.00%		Q29DX1              	100.00%
Bootstrap support for I9NPD7 as seed ortholog is 100%.
Bootstrap support for Q29DX1 as seed ortholog is 100%.

Group of orthologs #20. Best score 1149 bits
Score difference with first non-orthologous sequence - C.immitis:1149 D.pseudoobscura:1149

I9NNK7              	100.00%		B5DK66              	100.00%
Bootstrap support for I9NNK7 as seed ortholog is 100%.
Bootstrap support for B5DK66 as seed ortholog is 100%.

Group of orthologs #21. Best score 1134 bits
Score difference with first non-orthologous sequence - C.immitis:1134 D.pseudoobscura:882

J3K309              	100.00%		Q290U1              	100.00%
Bootstrap support for J3K309 as seed ortholog is 100%.
Bootstrap support for Q290U1 as seed ortholog is 100%.

Group of orthologs #22. Best score 1134 bits
Score difference with first non-orthologous sequence - C.immitis:1134 D.pseudoobscura:1134

J3KCP4              	100.00%		Q296N6              	100.00%
Bootstrap support for J3KCP4 as seed ortholog is 100%.
Bootstrap support for Q296N6 as seed ortholog is 100%.

Group of orthologs #23. Best score 1109 bits
Score difference with first non-orthologous sequence - C.immitis:1109 D.pseudoobscura:1109

J3KAE2              	100.00%		Q29K53              	100.00%
Bootstrap support for J3KAE2 as seed ortholog is 100%.
Bootstrap support for Q29K53 as seed ortholog is 100%.

Group of orthologs #24. Best score 1096 bits
Score difference with first non-orthologous sequence - C.immitis:1096 D.pseudoobscura:542

J3KJL0              	100.00%		P22811              	100.00%
Bootstrap support for J3KJL0 as seed ortholog is 100%.
Bootstrap support for P22811 as seed ortholog is 100%.

Group of orthologs #25. Best score 1089 bits
Score difference with first non-orthologous sequence - C.immitis:1089 D.pseudoobscura:1089

J3KLB9              	100.00%		Q29AG5              	100.00%
Bootstrap support for J3KLB9 as seed ortholog is 100%.
Bootstrap support for Q29AG5 as seed ortholog is 100%.

Group of orthologs #26. Best score 1084 bits
Score difference with first non-orthologous sequence - C.immitis:598 D.pseudoobscura:602

J3KEC7              	100.00%		Q29GN6              	100.00%
Bootstrap support for J3KEC7 as seed ortholog is 100%.
Bootstrap support for Q29GN6 as seed ortholog is 100%.

Group of orthologs #27. Best score 1082 bits
Score difference with first non-orthologous sequence - C.immitis:1082 D.pseudoobscura:887

J3K366              	100.00%		Q29D92              	100.00%
Bootstrap support for J3K366 as seed ortholog is 100%.
Bootstrap support for Q29D92 as seed ortholog is 100%.

Group of orthologs #28. Best score 1068 bits
Score difference with first non-orthologous sequence - C.immitis:256 D.pseudoobscura:864

J3KK58              	100.00%		Q29NT1              	100.00%
                    	       		Q293Z1              	46.43%
Bootstrap support for J3KK58 as seed ortholog is 100%.
Bootstrap support for Q29NT1 as seed ortholog is 100%.

Group of orthologs #29. Best score 1066 bits
Score difference with first non-orthologous sequence - C.immitis:1066 D.pseudoobscura:1066

J3K9Q8              	100.00%		B5DMP8              	100.00%
Bootstrap support for J3K9Q8 as seed ortholog is 100%.
Bootstrap support for B5DMP8 as seed ortholog is 100%.

Group of orthologs #30. Best score 1065 bits
Score difference with first non-orthologous sequence - C.immitis:1065 D.pseudoobscura:1065

J3K6H6              	100.00%		Q295C2              	100.00%
Bootstrap support for J3K6H6 as seed ortholog is 100%.
Bootstrap support for Q295C2 as seed ortholog is 100%.

Group of orthologs #31. Best score 1063 bits
Score difference with first non-orthologous sequence - C.immitis:1063 D.pseudoobscura:907

J3KBJ1              	100.00%		Q29F05              	100.00%
Bootstrap support for J3KBJ1 as seed ortholog is 100%.
Bootstrap support for Q29F05 as seed ortholog is 100%.

Group of orthologs #32. Best score 1059 bits
Score difference with first non-orthologous sequence - C.immitis:1059 D.pseudoobscura:1059

J3K3N9              	100.00%		Q29NZ9              	100.00%
Bootstrap support for J3K3N9 as seed ortholog is 100%.
Bootstrap support for Q29NZ9 as seed ortholog is 100%.

Group of orthologs #33. Best score 1051 bits
Score difference with first non-orthologous sequence - C.immitis:1051 D.pseudoobscura:1051

J3K4J5              	100.00%		Q293Q3              	100.00%
Bootstrap support for J3K4J5 as seed ortholog is 100%.
Bootstrap support for Q293Q3 as seed ortholog is 100%.

Group of orthologs #34. Best score 1028 bits
Score difference with first non-orthologous sequence - C.immitis:1028 D.pseudoobscura:1028

J3KDC1              	100.00%		Q29KE6              	100.00%
Bootstrap support for J3KDC1 as seed ortholog is 100%.
Bootstrap support for Q29KE6 as seed ortholog is 100%.

Group of orthologs #35. Best score 1006 bits
Score difference with first non-orthologous sequence - C.immitis:604 D.pseudoobscura:807

J3KHB1              	100.00%		Q293F0              	100.00%
Bootstrap support for J3KHB1 as seed ortholog is 100%.
Bootstrap support for Q293F0 as seed ortholog is 100%.

Group of orthologs #36. Best score 1003 bits
Score difference with first non-orthologous sequence - C.immitis:1003 D.pseudoobscura:1003

J0HEL4              	100.00%		Q28Y05              	100.00%
Bootstrap support for J0HEL4 as seed ortholog is 100%.
Bootstrap support for Q28Y05 as seed ortholog is 100%.

Group of orthologs #37. Best score 1002 bits
Score difference with first non-orthologous sequence - C.immitis:1002 D.pseudoobscura:1002

J3K655              	100.00%		B5DWC3              	100.00%
                    	       		B5DWC6              	98.38%
Bootstrap support for J3K655 as seed ortholog is 100%.
Bootstrap support for B5DWC3 as seed ortholog is 100%.

Group of orthologs #38. Best score 981 bits
Score difference with first non-orthologous sequence - C.immitis:729 D.pseudoobscura:868

J3K3V7              	100.00%		Q292Q0              	100.00%
Bootstrap support for J3K3V7 as seed ortholog is 100%.
Bootstrap support for Q292Q0 as seed ortholog is 100%.

Group of orthologs #39. Best score 977 bits
Score difference with first non-orthologous sequence - C.immitis:364 D.pseudoobscura:315

J3KHW9              	100.00%		B5E065              	100.00%
Bootstrap support for J3KHW9 as seed ortholog is 100%.
Bootstrap support for B5E065 as seed ortholog is 100%.

Group of orthologs #40. Best score 970 bits
Score difference with first non-orthologous sequence - C.immitis:292 D.pseudoobscura:96

J3KLW5              	100.00%		Q294C1              	100.00%
                    	       		B5DPL1              	32.17%
                    	       		B5DWQ0              	22.29%
Bootstrap support for J3KLW5 as seed ortholog is 100%.
Bootstrap support for Q294C1 as seed ortholog is 99%.

Group of orthologs #41. Best score 968 bits
Score difference with first non-orthologous sequence - C.immitis:414 D.pseudoobscura:470

J3KI73              	100.00%		Q29CK8              	100.00%
Bootstrap support for J3KI73 as seed ortholog is 100%.
Bootstrap support for Q29CK8 as seed ortholog is 100%.

Group of orthologs #42. Best score 953 bits
Score difference with first non-orthologous sequence - C.immitis:953 D.pseudoobscura:953

J3K7S5              	100.00%		B5DRW4              	100.00%
Bootstrap support for J3K7S5 as seed ortholog is 100%.
Bootstrap support for B5DRW4 as seed ortholog is 100%.

Group of orthologs #43. Best score 951 bits
Score difference with first non-orthologous sequence - C.immitis:951 D.pseudoobscura:951

J3K4L9              	100.00%		Q29DZ6              	100.00%
Bootstrap support for J3K4L9 as seed ortholog is 100%.
Bootstrap support for Q29DZ6 as seed ortholog is 100%.

Group of orthologs #44. Best score 945 bits
Score difference with first non-orthologous sequence - C.immitis:945 D.pseudoobscura:544

J3K9K4              	100.00%		Q292L1              	100.00%
                    	       		B5DI76              	9.81%
Bootstrap support for J3K9K4 as seed ortholog is 100%.
Bootstrap support for Q292L1 as seed ortholog is 100%.

Group of orthologs #45. Best score 936 bits
Score difference with first non-orthologous sequence - C.immitis:439 D.pseudoobscura:936

J3KBI0              	100.00%		Q291D4              	100.00%
Bootstrap support for J3KBI0 as seed ortholog is 100%.
Bootstrap support for Q291D4 as seed ortholog is 100%.

Group of orthologs #46. Best score 906 bits
Score difference with first non-orthologous sequence - C.immitis:906 D.pseudoobscura:325

J3KJT8              	100.00%		Q29DU3              	100.00%
                    	       		Q29E02              	24.54%
Bootstrap support for J3KJT8 as seed ortholog is 100%.
Bootstrap support for Q29DU3 as seed ortholog is 100%.

Group of orthologs #47. Best score 898 bits
Score difference with first non-orthologous sequence - C.immitis:898 D.pseudoobscura:260

J3KEL0              	100.00%		P04809              	100.00%
Bootstrap support for J3KEL0 as seed ortholog is 100%.
Bootstrap support for P04809 as seed ortholog is 100%.

Group of orthologs #48. Best score 891 bits
Score difference with first non-orthologous sequence - C.immitis:891 D.pseudoobscura:278

J3KL31              	100.00%		Q28Z57              	100.00%
Bootstrap support for J3KL31 as seed ortholog is 100%.
Bootstrap support for Q28Z57 as seed ortholog is 99%.

Group of orthologs #49. Best score 890 bits
Score difference with first non-orthologous sequence - C.immitis:890 D.pseudoobscura:890

J3KEU9              	100.00%		Q29GS1              	100.00%
Bootstrap support for J3KEU9 as seed ortholog is 100%.
Bootstrap support for Q29GS1 as seed ortholog is 100%.

Group of orthologs #50. Best score 888 bits
Score difference with first non-orthologous sequence - C.immitis:888 D.pseudoobscura:888

Q1DY01              	100.00%		I5ANM9              	100.00%
Bootstrap support for Q1DY01 as seed ortholog is 100%.
Bootstrap support for I5ANM9 as seed ortholog is 100%.

Group of orthologs #51. Best score 886 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:441

J3K2F2              	100.00%		Q292S7              	100.00%
Bootstrap support for J3K2F2 as seed ortholog is 100%.
Bootstrap support for Q292S7 as seed ortholog is 100%.

Group of orthologs #52. Best score 884 bits
Score difference with first non-orthologous sequence - C.immitis:789 D.pseudoobscura:502

I9XLW9              	100.00%		Q29JZ8              	100.00%
Bootstrap support for I9XLW9 as seed ortholog is 100%.
Bootstrap support for Q29JZ8 as seed ortholog is 100%.

Group of orthologs #53. Best score 878 bits
Score difference with first non-orthologous sequence - C.immitis:878 D.pseudoobscura:878

J3K532              	100.00%		Q29P92              	100.00%
Bootstrap support for J3K532 as seed ortholog is 100%.
Bootstrap support for Q29P92 as seed ortholog is 100%.

Group of orthologs #54. Best score 878 bits
Score difference with first non-orthologous sequence - C.immitis:878 D.pseudoobscura:878

J3KK27              	100.00%		Q29MC7              	100.00%
Bootstrap support for J3KK27 as seed ortholog is 100%.
Bootstrap support for Q29MC7 as seed ortholog is 100%.

Group of orthologs #55. Best score 869 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:124

J3KLI4              	100.00%		Q292E4              	100.00%
Bootstrap support for J3KLI4 as seed ortholog is 96%.
Bootstrap support for Q292E4 as seed ortholog is 99%.

Group of orthologs #56. Best score 866 bits
Score difference with first non-orthologous sequence - C.immitis:866 D.pseudoobscura:866

J3K149              	100.00%		Q291U7              	100.00%
Bootstrap support for J3K149 as seed ortholog is 100%.
Bootstrap support for Q291U7 as seed ortholog is 100%.

Group of orthologs #57. Best score 862 bits
Score difference with first non-orthologous sequence - C.immitis:862 D.pseudoobscura:429

J3KLD6              	100.00%		Q29NZ1              	100.00%
Bootstrap support for J3KLD6 as seed ortholog is 100%.
Bootstrap support for Q29NZ1 as seed ortholog is 100%.

Group of orthologs #58. Best score 859 bits
Score difference with first non-orthologous sequence - C.immitis:776 D.pseudoobscura:859

J3KG85              	100.00%		Q29M40              	100.00%
Bootstrap support for J3KG85 as seed ortholog is 100%.
Bootstrap support for Q29M40 as seed ortholog is 100%.

Group of orthologs #59. Best score 857 bits
Score difference with first non-orthologous sequence - C.immitis:239 D.pseudoobscura:114

J3KIY6              	100.00%		Q29HE5              	100.00%
Bootstrap support for J3KIY6 as seed ortholog is 100%.
Bootstrap support for Q29HE5 as seed ortholog is 99%.

Group of orthologs #60. Best score 852 bits
Score difference with first non-orthologous sequence - C.immitis:852 D.pseudoobscura:614

J3KBH9              	100.00%		B5E1L9              	100.00%
Bootstrap support for J3KBH9 as seed ortholog is 100%.
Bootstrap support for B5E1L9 as seed ortholog is 100%.

Group of orthologs #61. Best score 852 bits
Score difference with first non-orthologous sequence - C.immitis:776 D.pseudoobscura:852

I9NSR7              	100.00%		Q29F45              	100.00%
Bootstrap support for I9NSR7 as seed ortholog is 100%.
Bootstrap support for Q29F45 as seed ortholog is 100%.

Group of orthologs #62. Best score 849 bits
Score difference with first non-orthologous sequence - C.immitis:849 D.pseudoobscura:849

J3KIN9              	100.00%		Q29N37              	100.00%
Bootstrap support for J3KIN9 as seed ortholog is 100%.
Bootstrap support for Q29N37 as seed ortholog is 100%.

Group of orthologs #63. Best score 846 bits
Score difference with first non-orthologous sequence - C.immitis:846 D.pseudoobscura:846

I9XLK3              	100.00%		Q29K69              	100.00%
Bootstrap support for I9XLK3 as seed ortholog is 100%.
Bootstrap support for Q29K69 as seed ortholog is 100%.

Group of orthologs #64. Best score 837 bits
Score difference with first non-orthologous sequence - C.immitis:837 D.pseudoobscura:837

J3K9Z5              	100.00%		Q29G21              	100.00%
Bootstrap support for J3K9Z5 as seed ortholog is 100%.
Bootstrap support for Q29G21 as seed ortholog is 100%.

Group of orthologs #65. Best score 834 bits
Score difference with first non-orthologous sequence - C.immitis:834 D.pseudoobscura:834

J3KL71              	100.00%		B5DU70              	100.00%
Bootstrap support for J3KL71 as seed ortholog is 100%.
Bootstrap support for B5DU70 as seed ortholog is 100%.

Group of orthologs #66. Best score 827 bits
Score difference with first non-orthologous sequence - C.immitis:827 D.pseudoobscura:827

J3KFT2              	100.00%		Q29HM9              	100.00%
Bootstrap support for J3KFT2 as seed ortholog is 100%.
Bootstrap support for Q29HM9 as seed ortholog is 100%.

Group of orthologs #67. Best score 822 bits
Score difference with first non-orthologous sequence - C.immitis:179 D.pseudoobscura:640

J3K857              	100.00%		Q28X60              	100.00%
I9XJA2              	7.80%		Q290X0              	8.42%
                    	       		Q29FI1              	6.49%
Bootstrap support for J3K857 as seed ortholog is 99%.
Bootstrap support for Q28X60 as seed ortholog is 100%.

Group of orthologs #68. Best score 822 bits
Score difference with first non-orthologous sequence - C.immitis:822 D.pseudoobscura:822

J3K1P2              	100.00%		B5DYD3              	100.00%
Bootstrap support for J3K1P2 as seed ortholog is 100%.
Bootstrap support for B5DYD3 as seed ortholog is 100%.

Group of orthologs #69. Best score 822 bits
Score difference with first non-orthologous sequence - C.immitis:822 D.pseudoobscura:822

J3K7S7              	100.00%		Q29LJ9              	100.00%
Bootstrap support for J3K7S7 as seed ortholog is 100%.
Bootstrap support for Q29LJ9 as seed ortholog is 100%.

Group of orthologs #70. Best score 819 bits
Score difference with first non-orthologous sequence - C.immitis:819 D.pseudoobscura:819

J3K8C3              	100.00%		Q28Z54              	100.00%
Bootstrap support for J3K8C3 as seed ortholog is 100%.
Bootstrap support for Q28Z54 as seed ortholog is 100%.

Group of orthologs #71. Best score 819 bits
Score difference with first non-orthologous sequence - C.immitis:335 D.pseudoobscura:280

J3KDW8              	100.00%		Q28X59              	100.00%
Bootstrap support for J3KDW8 as seed ortholog is 100%.
Bootstrap support for Q28X59 as seed ortholog is 100%.

Group of orthologs #72. Best score 816 bits
Score difference with first non-orthologous sequence - C.immitis:816 D.pseudoobscura:816

J3K2G2              	100.00%		Q2LYV7              	100.00%
Bootstrap support for J3K2G2 as seed ortholog is 100%.
Bootstrap support for Q2LYV7 as seed ortholog is 100%.

Group of orthologs #73. Best score 807 bits
Score difference with first non-orthologous sequence - C.immitis:807 D.pseudoobscura:807

J3KFD1              	100.00%		Q29EX5              	100.00%
Bootstrap support for J3KFD1 as seed ortholog is 100%.
Bootstrap support for Q29EX5 as seed ortholog is 100%.

Group of orthologs #74. Best score 804 bits
Score difference with first non-orthologous sequence - C.immitis:804 D.pseudoobscura:271

Q1DUF9              	100.00%		Q293N9              	100.00%
Bootstrap support for Q1DUF9 as seed ortholog is 100%.
Bootstrap support for Q293N9 as seed ortholog is 100%.

Group of orthologs #75. Best score 802 bits
Score difference with first non-orthologous sequence - C.immitis:802 D.pseudoobscura:802

J3K0N8              	100.00%		Q28WR6              	100.00%
Bootstrap support for J3K0N8 as seed ortholog is 100%.
Bootstrap support for Q28WR6 as seed ortholog is 100%.

Group of orthologs #76. Best score 800 bits
Score difference with first non-orthologous sequence - C.immitis:800 D.pseudoobscura:800

J3KGY5              	100.00%		Q292G2              	100.00%
Bootstrap support for J3KGY5 as seed ortholog is 100%.
Bootstrap support for Q292G2 as seed ortholog is 100%.

Group of orthologs #77. Best score 800 bits
Score difference with first non-orthologous sequence - C.immitis:800 D.pseudoobscura:198

J3KLL6              	100.00%		Q28WQ1              	100.00%
Bootstrap support for J3KLL6 as seed ortholog is 100%.
Bootstrap support for Q28WQ1 as seed ortholog is 98%.

Group of orthologs #78. Best score 789 bits
Score difference with first non-orthologous sequence - C.immitis:789 D.pseudoobscura:789

J3KJJ9              	100.00%		B5DLK9              	100.00%
Bootstrap support for J3KJJ9 as seed ortholog is 100%.
Bootstrap support for B5DLK9 as seed ortholog is 100%.

Group of orthologs #79. Best score 787 bits
Score difference with first non-orthologous sequence - C.immitis:787 D.pseudoobscura:787

J3KIB8              	100.00%		Q29DK3              	100.00%
Bootstrap support for J3KIB8 as seed ortholog is 100%.
Bootstrap support for Q29DK3 as seed ortholog is 100%.

Group of orthologs #80. Best score 783 bits
Score difference with first non-orthologous sequence - C.immitis:362 D.pseudoobscura:783

J3K5M3              	100.00%		B5DWR6              	100.00%
                    	       		Q29DF2              	72.79%
                    	       		B5DLI0              	27.46%
Bootstrap support for J3K5M3 as seed ortholog is 100%.
Bootstrap support for B5DWR6 as seed ortholog is 100%.

Group of orthologs #81. Best score 781 bits
Score difference with first non-orthologous sequence - C.immitis:781 D.pseudoobscura:781

J3K8R9              	100.00%		B5DJE5              	100.00%
                    	       		Q29L63              	80.09%
                    	       		Q29L65              	31.90%
Bootstrap support for J3K8R9 as seed ortholog is 100%.
Bootstrap support for B5DJE5 as seed ortholog is 100%.

Group of orthologs #82. Best score 778 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:88

J3K788              	100.00%		Q295S5              	100.00%
Bootstrap support for J3K788 as seed ortholog is 91%.
Bootstrap support for Q295S5 as seed ortholog is 56%.
Alternative seed ortholog is B5DH70 (88 bits away from this cluster)

Group of orthologs #83. Best score 776 bits
Score difference with first non-orthologous sequence - C.immitis:776 D.pseudoobscura:776

J3KF80              	100.00%		Q29DQ2              	100.00%
Bootstrap support for J3KF80 as seed ortholog is 100%.
Bootstrap support for Q29DQ2 as seed ortholog is 100%.

Group of orthologs #84. Best score 775 bits
Score difference with first non-orthologous sequence - C.immitis:495 D.pseudoobscura:775

J3K3D5              	100.00%		Q297C3              	100.00%
Bootstrap support for J3K3D5 as seed ortholog is 100%.
Bootstrap support for Q297C3 as seed ortholog is 100%.

Group of orthologs #85. Best score 770 bits
Score difference with first non-orthologous sequence - C.immitis:770 D.pseudoobscura:770

I9XK07              	100.00%		Q2LZJ4              	100.00%
Bootstrap support for I9XK07 as seed ortholog is 100%.
Bootstrap support for Q2LZJ4 as seed ortholog is 100%.

Group of orthologs #86. Best score 768 bits
Score difference with first non-orthologous sequence - C.immitis:768 D.pseudoobscura:768

I9NSR3              	100.00%		B5DKF4              	100.00%
Bootstrap support for I9NSR3 as seed ortholog is 100%.
Bootstrap support for B5DKF4 as seed ortholog is 100%.

Group of orthologs #87. Best score 765 bits
Score difference with first non-orthologous sequence - C.immitis:396 D.pseudoobscura:94

J3K9Z0              	100.00%		B5DUR1              	100.00%
                    	       		Q29BM0              	71.62%
                    	       		Q28WU4              	50.68%
Bootstrap support for J3K9Z0 as seed ortholog is 100%.
Bootstrap support for B5DUR1 as seed ortholog is 99%.

Group of orthologs #88. Best score 758 bits
Score difference with first non-orthologous sequence - C.immitis:758 D.pseudoobscura:758

Q1DLM0              	100.00%		Q29N77              	100.00%
Bootstrap support for Q1DLM0 as seed ortholog is 100%.
Bootstrap support for Q29N77 as seed ortholog is 100%.

Group of orthologs #89. Best score 757 bits
Score difference with first non-orthologous sequence - C.immitis:757 D.pseudoobscura:757

J3K2I3              	100.00%		Q28XX1              	100.00%
Bootstrap support for J3K2I3 as seed ortholog is 100%.
Bootstrap support for Q28XX1 as seed ortholog is 100%.

Group of orthologs #90. Best score 748 bits
Score difference with first non-orthologous sequence - C.immitis:748 D.pseudoobscura:748

J3K3R0              	100.00%		Q29AH0              	100.00%
                    	       		I5APL2              	59.90%
Bootstrap support for J3K3R0 as seed ortholog is 100%.
Bootstrap support for Q29AH0 as seed ortholog is 100%.

Group of orthologs #91. Best score 748 bits
Score difference with first non-orthologous sequence - C.immitis:748 D.pseudoobscura:618

J3KG37              	100.00%		Q298Q3              	100.00%
Bootstrap support for J3KG37 as seed ortholog is 100%.
Bootstrap support for Q298Q3 as seed ortholog is 100%.

Group of orthologs #92. Best score 747 bits
Score difference with first non-orthologous sequence - C.immitis:747 D.pseudoobscura:627

Q96WZ1              	100.00%		Q297R9              	100.00%
                    	       		Q28XB6              	59.14%
Bootstrap support for Q96WZ1 as seed ortholog is 100%.
Bootstrap support for Q297R9 as seed ortholog is 100%.

Group of orthologs #93. Best score 745 bits
Score difference with first non-orthologous sequence - C.immitis:745 D.pseudoobscura:745

J3K584              	100.00%		Q291E9              	100.00%
Bootstrap support for J3K584 as seed ortholog is 100%.
Bootstrap support for Q291E9 as seed ortholog is 100%.

Group of orthologs #94. Best score 743 bits
Score difference with first non-orthologous sequence - C.immitis:682 D.pseudoobscura:743

J3K6I1              	100.00%		Q29N38              	100.00%
Bootstrap support for J3K6I1 as seed ortholog is 100%.
Bootstrap support for Q29N38 as seed ortholog is 100%.

Group of orthologs #95. Best score 742 bits
Score difference with first non-orthologous sequence - C.immitis:742 D.pseudoobscura:742

J3K7H2              	100.00%		Q29MI1              	100.00%
Bootstrap support for J3K7H2 as seed ortholog is 100%.
Bootstrap support for Q29MI1 as seed ortholog is 100%.

Group of orthologs #96. Best score 737 bits
Score difference with first non-orthologous sequence - C.immitis:737 D.pseudoobscura:737

J3KAN7              	100.00%		Q29HW0              	100.00%
Bootstrap support for J3KAN7 as seed ortholog is 100%.
Bootstrap support for Q29HW0 as seed ortholog is 100%.

Group of orthologs #97. Best score 735 bits
Score difference with first non-orthologous sequence - C.immitis:48 D.pseudoobscura:95

J3K8E4              	100.00%		Q294S5              	100.00%
Bootstrap support for J3K8E4 as seed ortholog is 94%.
Bootstrap support for Q294S5 as seed ortholog is 99%.

Group of orthologs #98. Best score 734 bits
Score difference with first non-orthologous sequence - C.immitis:734 D.pseudoobscura:734

J3KDW6              	100.00%		Q299C3              	100.00%
Bootstrap support for J3KDW6 as seed ortholog is 100%.
Bootstrap support for Q299C3 as seed ortholog is 100%.

Group of orthologs #99. Best score 734 bits
Score difference with first non-orthologous sequence - C.immitis:734 D.pseudoobscura:619

J3KFE2              	100.00%		Q29BS3              	100.00%
Bootstrap support for J3KFE2 as seed ortholog is 100%.
Bootstrap support for Q29BS3 as seed ortholog is 100%.

Group of orthologs #100. Best score 728 bits
Score difference with first non-orthologous sequence - C.immitis:453 D.pseudoobscura:628

J3KID1              	100.00%		Q2M0Q6              	100.00%
Bootstrap support for J3KID1 as seed ortholog is 100%.
Bootstrap support for Q2M0Q6 as seed ortholog is 100%.

Group of orthologs #101. Best score 723 bits
Score difference with first non-orthologous sequence - C.immitis:723 D.pseudoobscura:629

J3KDL6              	100.00%		Q291N3              	100.00%
Bootstrap support for J3KDL6 as seed ortholog is 100%.
Bootstrap support for Q291N3 as seed ortholog is 100%.

Group of orthologs #102. Best score 723 bits
Score difference with first non-orthologous sequence - C.immitis:723 D.pseudoobscura:610

J3KJ34              	100.00%		Q293E0              	100.00%
Bootstrap support for J3KJ34 as seed ortholog is 100%.
Bootstrap support for Q293E0 as seed ortholog is 100%.

Group of orthologs #103. Best score 722 bits
Score difference with first non-orthologous sequence - C.immitis:722 D.pseudoobscura:722

J3KBI9              	100.00%		Q29JY3              	100.00%
Bootstrap support for J3KBI9 as seed ortholog is 100%.
Bootstrap support for Q29JY3 as seed ortholog is 100%.

Group of orthologs #104. Best score 721 bits
Score difference with first non-orthologous sequence - C.immitis:721 D.pseudoobscura:721

J3KKG9              	100.00%		Q2M0E2              	100.00%
Bootstrap support for J3KKG9 as seed ortholog is 100%.
Bootstrap support for Q2M0E2 as seed ortholog is 100%.

Group of orthologs #105. Best score 716 bits
Score difference with first non-orthologous sequence - C.immitis:716 D.pseudoobscura:716

I9NM67              	100.00%		Q296I4              	100.00%
Bootstrap support for I9NM67 as seed ortholog is 100%.
Bootstrap support for Q296I4 as seed ortholog is 100%.

Group of orthologs #106. Best score 713 bits
Score difference with first non-orthologous sequence - C.immitis:713 D.pseudoobscura:713

J3K8Y2              	100.00%		Q29IV9              	100.00%
Bootstrap support for J3K8Y2 as seed ortholog is 100%.
Bootstrap support for Q29IV9 as seed ortholog is 100%.

Group of orthologs #107. Best score 712 bits
Score difference with first non-orthologous sequence - C.immitis:712 D.pseudoobscura:51

J3K8C2              	100.00%		Q29CL2              	100.00%
Bootstrap support for J3K8C2 as seed ortholog is 100%.
Bootstrap support for Q29CL2 as seed ortholog is 94%.

Group of orthologs #108. Best score 711 bits
Score difference with first non-orthologous sequence - C.immitis:711 D.pseudoobscura:711

J3KKE0              	100.00%		Q29H62              	100.00%
Bootstrap support for J3KKE0 as seed ortholog is 100%.
Bootstrap support for Q29H62 as seed ortholog is 100%.

Group of orthologs #109. Best score 710 bits
Score difference with first non-orthologous sequence - C.immitis:120 D.pseudoobscura:710

J3K4L6              	100.00%		Q29H04              	100.00%
Bootstrap support for J3K4L6 as seed ortholog is 99%.
Bootstrap support for Q29H04 as seed ortholog is 100%.

Group of orthologs #110. Best score 710 bits
Score difference with first non-orthologous sequence - C.immitis:710 D.pseudoobscura:710

J3K8G0              	100.00%		Q29FR7              	100.00%
Bootstrap support for J3K8G0 as seed ortholog is 100%.
Bootstrap support for Q29FR7 as seed ortholog is 100%.

Group of orthologs #111. Best score 708 bits
Score difference with first non-orthologous sequence - C.immitis:346 D.pseudoobscura:708

J3KKB5              	100.00%		Q29N74              	100.00%
Bootstrap support for J3KKB5 as seed ortholog is 100%.
Bootstrap support for Q29N74 as seed ortholog is 100%.

Group of orthologs #112. Best score 707 bits
Score difference with first non-orthologous sequence - C.immitis:172 D.pseudoobscura:145

J3K568              	100.00%		Q29L70              	100.00%
Bootstrap support for J3K568 as seed ortholog is 98%.
Bootstrap support for Q29L70 as seed ortholog is 97%.

Group of orthologs #113. Best score 705 bits
Score difference with first non-orthologous sequence - C.immitis:705 D.pseudoobscura:421

Q1DHB2              	100.00%		Q29G56              	100.00%
Bootstrap support for Q1DHB2 as seed ortholog is 100%.
Bootstrap support for Q29G56 as seed ortholog is 100%.

Group of orthologs #114. Best score 704 bits
Score difference with first non-orthologous sequence - C.immitis:704 D.pseudoobscura:282

J3K8J1              	100.00%		Q28YI2              	100.00%
Bootstrap support for J3K8J1 as seed ortholog is 100%.
Bootstrap support for Q28YI2 as seed ortholog is 100%.

Group of orthologs #115. Best score 704 bits
Score difference with first non-orthologous sequence - C.immitis:704 D.pseudoobscura:300

J3KJM2              	100.00%		Q29PN6              	100.00%
Bootstrap support for J3KJM2 as seed ortholog is 100%.
Bootstrap support for Q29PN6 as seed ortholog is 100%.

Group of orthologs #116. Best score 703 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:112

J3K833              	100.00%		Q294S9              	100.00%
                    	       		B5DJ61              	55.54%
                    	       		B5DW27              	54.50%
                    	       		Q29N89              	47.63%
                    	       		Q29NR3              	45.60%
                    	       		B5DXT3              	19.16%
                    	       		Q291V5              	17.07%
                    	       		Q297E7              	16.87%
                    	       		B5DXT4              	14.68%
Bootstrap support for J3K833 as seed ortholog is 90%.
Bootstrap support for Q294S9 as seed ortholog is 87%.

Group of orthologs #117. Best score 702 bits
Score difference with first non-orthologous sequence - C.immitis:702 D.pseudoobscura:702

J3K924              	100.00%		Q29JE9              	100.00%
Bootstrap support for J3K924 as seed ortholog is 100%.
Bootstrap support for Q29JE9 as seed ortholog is 100%.

Group of orthologs #118. Best score 697 bits
Score difference with first non-orthologous sequence - C.immitis:697 D.pseudoobscura:180

J3KA99              	100.00%		Q29H46              	100.00%
                    	       		B5DZR8              	100.00%
                    	       		Q297Q8              	75.38%
                    	       		B5E159              	72.31%
                    	       		B5DVZ6              	70.77%
                    	       		Q29DN0              	61.54%
Bootstrap support for J3KA99 as seed ortholog is 100%.
Bootstrap support for Q29H46 as seed ortholog is 100%.
Bootstrap support for B5DZR8 as seed ortholog is 100%.

Group of orthologs #119. Best score 694 bits
Score difference with first non-orthologous sequence - C.immitis:694 D.pseudoobscura:694

J3KM13              	100.00%		B5DPP2              	100.00%
Bootstrap support for J3KM13 as seed ortholog is 100%.
Bootstrap support for B5DPP2 as seed ortholog is 100%.

Group of orthologs #120. Best score 688 bits
Score difference with first non-orthologous sequence - C.immitis:688 D.pseudoobscura:688

J3K2W0              	100.00%		Q29EI2              	100.00%
Bootstrap support for J3K2W0 as seed ortholog is 100%.
Bootstrap support for Q29EI2 as seed ortholog is 100%.

Group of orthologs #121. Best score 680 bits
Score difference with first non-orthologous sequence - C.immitis:547 D.pseudoobscura:680

J3K9H3              	100.00%		Q292Y6              	100.00%
Bootstrap support for J3K9H3 as seed ortholog is 100%.
Bootstrap support for Q292Y6 as seed ortholog is 100%.

Group of orthologs #122. Best score 676 bits
Score difference with first non-orthologous sequence - C.immitis:676 D.pseudoobscura:676

J3K8U1              	100.00%		Q29PN1              	100.00%
Bootstrap support for J3K8U1 as seed ortholog is 100%.
Bootstrap support for Q29PN1 as seed ortholog is 100%.

Group of orthologs #123. Best score 673 bits
Score difference with first non-orthologous sequence - C.immitis:673 D.pseudoobscura:673

J3K0E7              	100.00%		Q29A03              	100.00%
Bootstrap support for J3K0E7 as seed ortholog is 100%.
Bootstrap support for Q29A03 as seed ortholog is 100%.

Group of orthologs #124. Best score 673 bits
Score difference with first non-orthologous sequence - C.immitis:673 D.pseudoobscura:673

J3K4D4              	100.00%		Q298K8              	100.00%
Bootstrap support for J3K4D4 as seed ortholog is 100%.
Bootstrap support for Q298K8 as seed ortholog is 100%.

Group of orthologs #125. Best score 670 bits
Score difference with first non-orthologous sequence - C.immitis:670 D.pseudoobscura:531

J3KF91              	100.00%		Q29GC2              	100.00%
Bootstrap support for J3KF91 as seed ortholog is 100%.
Bootstrap support for Q29GC2 as seed ortholog is 100%.

Group of orthologs #126. Best score 669 bits
Score difference with first non-orthologous sequence - C.immitis:669 D.pseudoobscura:241

J3KJS9              	100.00%		Q28YJ6              	100.00%
Bootstrap support for J3KJS9 as seed ortholog is 100%.
Bootstrap support for Q28YJ6 as seed ortholog is 98%.

Group of orthologs #127. Best score 667 bits
Score difference with first non-orthologous sequence - C.immitis:667 D.pseudoobscura:614

J3KGR5              	100.00%		Q298V2              	100.00%
Bootstrap support for J3KGR5 as seed ortholog is 100%.
Bootstrap support for Q298V2 as seed ortholog is 100%.

Group of orthologs #128. Best score 663 bits
Score difference with first non-orthologous sequence - C.immitis:344 D.pseudoobscura:663

J3KJ50              	100.00%		Q29G05              	100.00%
Bootstrap support for J3KJ50 as seed ortholog is 100%.
Bootstrap support for Q29G05 as seed ortholog is 100%.

Group of orthologs #129. Best score 661 bits
Score difference with first non-orthologous sequence - C.immitis:270 D.pseudoobscura:452

I9XM85              	100.00%		Q29KH0              	100.00%
Bootstrap support for I9XM85 as seed ortholog is 100%.
Bootstrap support for Q29KH0 as seed ortholog is 100%.

Group of orthologs #130. Best score 660 bits
Score difference with first non-orthologous sequence - C.immitis:660 D.pseudoobscura:578

J3K114              	100.00%		Q29GX0              	100.00%
Bootstrap support for J3K114 as seed ortholog is 100%.
Bootstrap support for Q29GX0 as seed ortholog is 100%.

Group of orthologs #131. Best score 657 bits
Score difference with first non-orthologous sequence - C.immitis:657 D.pseudoobscura:657

J3K1S3              	100.00%		Q28ZD4              	100.00%
Bootstrap support for J3K1S3 as seed ortholog is 100%.
Bootstrap support for Q28ZD4 as seed ortholog is 100%.

Group of orthologs #132. Best score 653 bits
Score difference with first non-orthologous sequence - C.immitis:653 D.pseudoobscura:653

J3KLI3              	100.00%		I5APZ7              	100.00%
Bootstrap support for J3KLI3 as seed ortholog is 100%.
Bootstrap support for I5APZ7 as seed ortholog is 100%.

Group of orthologs #133. Best score 651 bits
Score difference with first non-orthologous sequence - C.immitis:651 D.pseudoobscura:284

J3K8C5              	100.00%		B5DL96              	100.00%
                    	       		B5DJP5              	57.88%
Bootstrap support for J3K8C5 as seed ortholog is 100%.
Bootstrap support for B5DL96 as seed ortholog is 100%.

Group of orthologs #134. Best score 651 bits
Score difference with first non-orthologous sequence - C.immitis:651 D.pseudoobscura:651

I9NQA2              	100.00%		Q2M0V2              	100.00%
Bootstrap support for I9NQA2 as seed ortholog is 100%.
Bootstrap support for Q2M0V2 as seed ortholog is 100%.

Group of orthologs #135. Best score 650 bits
Score difference with first non-orthologous sequence - C.immitis:650 D.pseudoobscura:503

J3K490              	100.00%		Q29D32              	100.00%
Bootstrap support for J3K490 as seed ortholog is 100%.
Bootstrap support for Q29D32 as seed ortholog is 100%.

Group of orthologs #136. Best score 648 bits
Score difference with first non-orthologous sequence - C.immitis:648 D.pseudoobscura:587

J3KBQ0              	100.00%		Q297K0              	100.00%
Bootstrap support for J3KBQ0 as seed ortholog is 100%.
Bootstrap support for Q297K0 as seed ortholog is 100%.

Group of orthologs #137. Best score 648 bits
Score difference with first non-orthologous sequence - C.immitis:648 D.pseudoobscura:648

J3KJ84              	100.00%		Q295Y5              	100.00%
Bootstrap support for J3KJ84 as seed ortholog is 100%.
Bootstrap support for Q295Y5 as seed ortholog is 100%.

Group of orthologs #138. Best score 648 bits
Score difference with first non-orthologous sequence - C.immitis:422 D.pseudoobscura:369

Q1DMX8              	100.00%		Q29MP0              	100.00%
Bootstrap support for Q1DMX8 as seed ortholog is 100%.
Bootstrap support for Q29MP0 as seed ortholog is 100%.

Group of orthologs #139. Best score 646 bits
Score difference with first non-orthologous sequence - C.immitis:370 D.pseudoobscura:446

Q1DTB3              	100.00%		Q298G7              	100.00%
Bootstrap support for Q1DTB3 as seed ortholog is 100%.
Bootstrap support for Q298G7 as seed ortholog is 100%.

Group of orthologs #140. Best score 645 bits
Score difference with first non-orthologous sequence - C.immitis:645 D.pseudoobscura:645

J3K9L2              	100.00%		Q28ZE7              	100.00%
Bootstrap support for J3K9L2 as seed ortholog is 100%.
Bootstrap support for Q28ZE7 as seed ortholog is 100%.

Group of orthologs #141. Best score 642 bits
Score difference with first non-orthologous sequence - C.immitis:642 D.pseudoobscura:642

J3KBL3              	100.00%		B5DKI8              	100.00%
                    	       		Q298B1              	76.74%
Bootstrap support for J3KBL3 as seed ortholog is 100%.
Bootstrap support for B5DKI8 as seed ortholog is 100%.

Group of orthologs #142. Best score 641 bits
Score difference with first non-orthologous sequence - C.immitis:641 D.pseudoobscura:641

J3K4Y0              	100.00%		Q28Y79              	100.00%
Bootstrap support for J3K4Y0 as seed ortholog is 100%.
Bootstrap support for Q28Y79 as seed ortholog is 100%.

Group of orthologs #143. Best score 639 bits
Score difference with first non-orthologous sequence - C.immitis:639 D.pseudoobscura:179

J3KKB8              	100.00%		Q2LYL2              	100.00%
Bootstrap support for J3KKB8 as seed ortholog is 100%.
Bootstrap support for Q2LYL2 as seed ortholog is 99%.

Group of orthologs #144. Best score 638 bits
Score difference with first non-orthologous sequence - C.immitis:638 D.pseudoobscura:582

J3KKK4              	100.00%		B5DLU0              	100.00%
                    	       		B5DWX8              	80.10%
Bootstrap support for J3KKK4 as seed ortholog is 100%.
Bootstrap support for B5DLU0 as seed ortholog is 100%.

Group of orthologs #145. Best score 637 bits
Score difference with first non-orthologous sequence - C.immitis:637 D.pseudoobscura:637

J3KER0              	100.00%		B5DIC7              	100.00%
Bootstrap support for J3KER0 as seed ortholog is 100%.
Bootstrap support for B5DIC7 as seed ortholog is 100%.

Group of orthologs #146. Best score 634 bits
Score difference with first non-orthologous sequence - C.immitis:634 D.pseudoobscura:634

J3KKD4              	100.00%		Q29AE5              	100.00%
Bootstrap support for J3KKD4 as seed ortholog is 100%.
Bootstrap support for Q29AE5 as seed ortholog is 100%.

Group of orthologs #147. Best score 633 bits
Score difference with first non-orthologous sequence - C.immitis:633 D.pseudoobscura:418

J3K9C5              	100.00%		Q29HM8              	100.00%
                    	       		B5DX15              	31.41%
                    	       		B5DV58              	17.69%
Bootstrap support for J3K9C5 as seed ortholog is 100%.
Bootstrap support for Q29HM8 as seed ortholog is 100%.

Group of orthologs #148. Best score 633 bits
Score difference with first non-orthologous sequence - C.immitis:633 D.pseudoobscura:633

J3KJJ4              	100.00%		Q29AK9              	100.00%
Bootstrap support for J3KJJ4 as seed ortholog is 100%.
Bootstrap support for Q29AK9 as seed ortholog is 100%.

Group of orthologs #149. Best score 631 bits
Score difference with first non-orthologous sequence - C.immitis:631 D.pseudoobscura:631

J3K7X6              	100.00%		Q298N1              	100.00%
Bootstrap support for J3K7X6 as seed ortholog is 100%.
Bootstrap support for Q298N1 as seed ortholog is 100%.

Group of orthologs #150. Best score 631 bits
Score difference with first non-orthologous sequence - C.immitis:631 D.pseudoobscura:631

J3KIR3              	100.00%		Q29FS9              	100.00%
Bootstrap support for J3KIR3 as seed ortholog is 100%.
Bootstrap support for Q29FS9 as seed ortholog is 100%.

Group of orthologs #151. Best score 630 bits
Score difference with first non-orthologous sequence - C.immitis:630 D.pseudoobscura:214

J3K3N0              	100.00%		Q28WL2              	100.00%
Bootstrap support for J3K3N0 as seed ortholog is 100%.
Bootstrap support for Q28WL2 as seed ortholog is 100%.

Group of orthologs #152. Best score 630 bits
Score difference with first non-orthologous sequence - C.immitis:630 D.pseudoobscura:554

J3K8X7              	100.00%		Q28XK7              	100.00%
Bootstrap support for J3K8X7 as seed ortholog is 100%.
Bootstrap support for Q28XK7 as seed ortholog is 100%.

Group of orthologs #153. Best score 628 bits
Score difference with first non-orthologous sequence - C.immitis:430 D.pseudoobscura:432

Q1EA54              	100.00%		B5DW65              	100.00%
Bootstrap support for Q1EA54 as seed ortholog is 100%.
Bootstrap support for B5DW65 as seed ortholog is 100%.

Group of orthologs #154. Best score 628 bits
Score difference with first non-orthologous sequence - C.immitis:628 D.pseudoobscura:628

J3KD03              	100.00%		Q294I9              	100.00%
Bootstrap support for J3KD03 as seed ortholog is 100%.
Bootstrap support for Q294I9 as seed ortholog is 100%.

Group of orthologs #155. Best score 627 bits
Score difference with first non-orthologous sequence - C.immitis:627 D.pseudoobscura:627

J3K852              	100.00%		Q29PD8              	100.00%
Bootstrap support for J3K852 as seed ortholog is 100%.
Bootstrap support for Q29PD8 as seed ortholog is 100%.

Group of orthologs #156. Best score 626 bits
Score difference with first non-orthologous sequence - C.immitis:626 D.pseudoobscura:626

J3K6N0              	100.00%		Q2M197              	100.00%
Bootstrap support for J3K6N0 as seed ortholog is 100%.
Bootstrap support for Q2M197 as seed ortholog is 100%.

Group of orthologs #157. Best score 624 bits
Score difference with first non-orthologous sequence - C.immitis:624 D.pseudoobscura:564

J3KLI2              	100.00%		Q29L81              	100.00%
Bootstrap support for J3KLI2 as seed ortholog is 100%.
Bootstrap support for Q29L81 as seed ortholog is 100%.

Group of orthologs #158. Best score 623 bits
Score difference with first non-orthologous sequence - C.immitis:623 D.pseudoobscura:502

J3KHQ2              	100.00%		Q29JI9              	100.00%
Bootstrap support for J3KHQ2 as seed ortholog is 100%.
Bootstrap support for Q29JI9 as seed ortholog is 100%.

Group of orthologs #159. Best score 622 bits
Score difference with first non-orthologous sequence - C.immitis:475 D.pseudoobscura:521

J3K8I8              	100.00%		B5DS03              	100.00%
Bootstrap support for J3K8I8 as seed ortholog is 100%.
Bootstrap support for B5DS03 as seed ortholog is 100%.

Group of orthologs #160. Best score 621 bits
Score difference with first non-orthologous sequence - C.immitis:621 D.pseudoobscura:468

I9NLA9              	100.00%		Q28YI1              	100.00%
Bootstrap support for I9NLA9 as seed ortholog is 100%.
Bootstrap support for Q28YI1 as seed ortholog is 100%.

Group of orthologs #161. Best score 621 bits
Score difference with first non-orthologous sequence - C.immitis:621 D.pseudoobscura:82

J3KED5              	100.00%		B5DTD6              	100.00%
Bootstrap support for J3KED5 as seed ortholog is 100%.
Bootstrap support for B5DTD6 as seed ortholog is 99%.

Group of orthologs #162. Best score 621 bits
Score difference with first non-orthologous sequence - C.immitis:621 D.pseudoobscura:193

I9NPK0              	100.00%		Q29G51              	100.00%
Bootstrap support for I9NPK0 as seed ortholog is 100%.
Bootstrap support for Q29G51 as seed ortholog is 100%.

Group of orthologs #163. Best score 618 bits
Score difference with first non-orthologous sequence - C.immitis:561 D.pseudoobscura:618

J3KCK9              	100.00%		B5DN54              	100.00%
Bootstrap support for J3KCK9 as seed ortholog is 100%.
Bootstrap support for B5DN54 as seed ortholog is 100%.

Group of orthologs #164. Best score 616 bits
Score difference with first non-orthologous sequence - C.immitis:616 D.pseudoobscura:616

J3KBZ0              	100.00%		B5E0S4              	100.00%
Bootstrap support for J3KBZ0 as seed ortholog is 100%.
Bootstrap support for B5E0S4 as seed ortholog is 100%.

Group of orthologs #165. Best score 616 bits
Score difference with first non-orthologous sequence - C.immitis:616 D.pseudoobscura:616

J3KAR2              	100.00%		Q29FI4              	100.00%
Bootstrap support for J3KAR2 as seed ortholog is 100%.
Bootstrap support for Q29FI4 as seed ortholog is 100%.

Group of orthologs #166. Best score 615 bits
Score difference with first non-orthologous sequence - C.immitis:615 D.pseudoobscura:615

J3K9C9              	100.00%		B5DH51              	100.00%
Bootstrap support for J3K9C9 as seed ortholog is 100%.
Bootstrap support for B5DH51 as seed ortholog is 100%.

Group of orthologs #167. Best score 614 bits
Score difference with first non-orthologous sequence - C.immitis:462 D.pseudoobscura:500

J3KJM0              	100.00%		Q2LYQ0              	100.00%
Bootstrap support for J3KJM0 as seed ortholog is 100%.
Bootstrap support for Q2LYQ0 as seed ortholog is 100%.

Group of orthologs #168. Best score 613 bits
Score difference with first non-orthologous sequence - C.immitis:613 D.pseudoobscura:613

J3K877              	100.00%		Q2M196              	100.00%
Bootstrap support for J3K877 as seed ortholog is 100%.
Bootstrap support for Q2M196 as seed ortholog is 100%.

Group of orthologs #169. Best score 611 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:611

J3KLE7              	100.00%		Q29KX9              	100.00%
Bootstrap support for J3KLE7 as seed ortholog is 100%.
Bootstrap support for Q29KX9 as seed ortholog is 100%.

Group of orthologs #170. Best score 608 bits
Score difference with first non-orthologous sequence - C.immitis:397 D.pseudoobscura:358

J3K7E8              	100.00%		Q29KG7              	100.00%
                    	       		Q29K32              	45.70%
Bootstrap support for J3K7E8 as seed ortholog is 100%.
Bootstrap support for Q29KG7 as seed ortholog is 100%.

Group of orthologs #171. Best score 606 bits
Score difference with first non-orthologous sequence - C.immitis:232 D.pseudoobscura:205

Q1DJF0              	100.00%		B5DWF0              	100.00%
Bootstrap support for Q1DJF0 as seed ortholog is 99%.
Bootstrap support for B5DWF0 as seed ortholog is 99%.

Group of orthologs #172. Best score 602 bits
Score difference with first non-orthologous sequence - C.immitis:407 D.pseudoobscura:484

J3K9Y8              	100.00%		B5DRY0              	100.00%
J3KCD7              	28.01%		
Bootstrap support for J3K9Y8 as seed ortholog is 100%.
Bootstrap support for B5DRY0 as seed ortholog is 100%.

Group of orthologs #173. Best score 600 bits
Score difference with first non-orthologous sequence - C.immitis:600 D.pseudoobscura:283

J3K980              	100.00%		Q295J6              	100.00%
Bootstrap support for J3K980 as seed ortholog is 100%.
Bootstrap support for Q295J6 as seed ortholog is 100%.

Group of orthologs #174. Best score 599 bits
Score difference with first non-orthologous sequence - C.immitis:599 D.pseudoobscura:247

J3K8N6              	100.00%		Q2LYJ1              	100.00%
Bootstrap support for J3K8N6 as seed ortholog is 100%.
Bootstrap support for Q2LYJ1 as seed ortholog is 99%.

Group of orthologs #175. Best score 598 bits
Score difference with first non-orthologous sequence - C.immitis:380 D.pseudoobscura:382

J3KHG6              	100.00%		Q29HB2              	100.00%
Bootstrap support for J3KHG6 as seed ortholog is 100%.
Bootstrap support for Q29HB2 as seed ortholog is 100%.

Group of orthologs #176. Best score 597 bits
Score difference with first non-orthologous sequence - C.immitis:269 D.pseudoobscura:365

J3KK51              	100.00%		B5DRP7              	100.00%
Bootstrap support for J3KK51 as seed ortholog is 100%.
Bootstrap support for B5DRP7 as seed ortholog is 100%.

Group of orthologs #177. Best score 596 bits
Score difference with first non-orthologous sequence - C.immitis:596 D.pseudoobscura:191

J3KJP7              	100.00%		I5ANG6              	100.00%
                    	       		Q299L9              	32.83%
                    	       		Q29MX4              	29.13%
                    	       		Q299M5              	25.33%
Bootstrap support for J3KJP7 as seed ortholog is 100%.
Bootstrap support for I5ANG6 as seed ortholog is 99%.

Group of orthologs #178. Best score 595 bits
Score difference with first non-orthologous sequence - C.immitis:595 D.pseudoobscura:532

J3K6C8              	100.00%		Q29I61              	100.00%
                    	       		B5DXM1              	55.84%
Bootstrap support for J3K6C8 as seed ortholog is 100%.
Bootstrap support for Q29I61 as seed ortholog is 100%.

Group of orthologs #179. Best score 594 bits
Score difference with first non-orthologous sequence - C.immitis:594 D.pseudoobscura:525

J3KBW7              	100.00%		Q299D0              	100.00%
Bootstrap support for J3KBW7 as seed ortholog is 100%.
Bootstrap support for Q299D0 as seed ortholog is 100%.

Group of orthologs #180. Best score 593 bits
Score difference with first non-orthologous sequence - C.immitis:593 D.pseudoobscura:209

J3K7H8              	100.00%		Q28YB0              	100.00%
Bootstrap support for J3K7H8 as seed ortholog is 100%.
Bootstrap support for Q28YB0 as seed ortholog is 99%.

Group of orthologs #181. Best score 592 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:137

J3K8D9              	100.00%		Q29IJ0              	100.00%
Bootstrap support for J3K8D9 as seed ortholog is 99%.
Bootstrap support for Q29IJ0 as seed ortholog is 99%.

Group of orthologs #182. Best score 591 bits
Score difference with first non-orthologous sequence - C.immitis:591 D.pseudoobscura:129

J3K5W3              	100.00%		Q29FE8              	100.00%
J3K8F6              	6.21%		
Bootstrap support for J3K5W3 as seed ortholog is 100%.
Bootstrap support for Q29FE8 as seed ortholog is 98%.

Group of orthologs #183. Best score 591 bits
Score difference with first non-orthologous sequence - C.immitis:591 D.pseudoobscura:591

J3K429              	100.00%		Q29IN8              	100.00%
Bootstrap support for J3K429 as seed ortholog is 100%.
Bootstrap support for Q29IN8 as seed ortholog is 100%.

Group of orthologs #184. Best score 591 bits
Score difference with first non-orthologous sequence - C.immitis:157 D.pseudoobscura:313

J3KK54              	100.00%		Q29KH2              	100.00%
Bootstrap support for J3KK54 as seed ortholog is 99%.
Bootstrap support for Q29KH2 as seed ortholog is 100%.

Group of orthologs #185. Best score 589 bits
Score difference with first non-orthologous sequence - C.immitis:298 D.pseudoobscura:589

J3KAL5              	100.00%		Q29M07              	100.00%
J3KLM8              	8.21%		Q29M08              	56.79%
J3K6U0              	7.90%		B5DVP9              	25.47%
J3K989              	7.33%		
Bootstrap support for J3KAL5 as seed ortholog is 99%.
Bootstrap support for Q29M07 as seed ortholog is 100%.

Group of orthologs #186. Best score 589 bits
Score difference with first non-orthologous sequence - C.immitis:589 D.pseudoobscura:589

I9NN23              	100.00%		Q28XF3              	100.00%
Bootstrap support for I9NN23 as seed ortholog is 100%.
Bootstrap support for Q28XF3 as seed ortholog is 100%.

Group of orthologs #187. Best score 589 bits
Score difference with first non-orthologous sequence - C.immitis:184 D.pseudoobscura:81

J3KE44              	100.00%		Q29EB4              	100.00%
Bootstrap support for J3KE44 as seed ortholog is 99%.
Bootstrap support for Q29EB4 as seed ortholog is 97%.

Group of orthologs #188. Best score 587 bits
Score difference with first non-orthologous sequence - C.immitis:587 D.pseudoobscura:587

J3K8K3              	100.00%		B5DZ83              	100.00%
Bootstrap support for J3K8K3 as seed ortholog is 100%.
Bootstrap support for B5DZ83 as seed ortholog is 100%.

Group of orthologs #189. Best score 587 bits
Score difference with first non-orthologous sequence - C.immitis:587 D.pseudoobscura:587

J3K8A4              	100.00%		Q29DI0              	100.00%
Bootstrap support for J3K8A4 as seed ortholog is 100%.
Bootstrap support for Q29DI0 as seed ortholog is 100%.

Group of orthologs #190. Best score 587 bits
Score difference with first non-orthologous sequence - C.immitis:587 D.pseudoobscura:587

J3KG95              	100.00%		Q29L91              	100.00%
Bootstrap support for J3KG95 as seed ortholog is 100%.
Bootstrap support for Q29L91 as seed ortholog is 100%.

Group of orthologs #191. Best score 586 bits
Score difference with first non-orthologous sequence - C.immitis:335 D.pseudoobscura:185

J3KDH1              	100.00%		Q29DF9              	100.00%
Bootstrap support for J3KDH1 as seed ortholog is 100%.
Bootstrap support for Q29DF9 as seed ortholog is 99%.

Group of orthologs #192. Best score 585 bits
Score difference with first non-orthologous sequence - C.immitis:585 D.pseudoobscura:585

J3KC80              	100.00%		Q29IU3              	100.00%
                    	       		Q299G9              	32.91%
Bootstrap support for J3KC80 as seed ortholog is 100%.
Bootstrap support for Q29IU3 as seed ortholog is 100%.

Group of orthologs #193. Best score 584 bits
Score difference with first non-orthologous sequence - C.immitis:584 D.pseudoobscura:584

J0HHZ2              	100.00%		B5E0I2              	100.00%
Bootstrap support for J0HHZ2 as seed ortholog is 100%.
Bootstrap support for B5E0I2 as seed ortholog is 100%.

Group of orthologs #194. Best score 584 bits
Score difference with first non-orthologous sequence - C.immitis:584 D.pseudoobscura:584

J3K5R8              	100.00%		Q28ZG8              	100.00%
Bootstrap support for J3K5R8 as seed ortholog is 100%.
Bootstrap support for Q28ZG8 as seed ortholog is 100%.

Group of orthologs #195. Best score 584 bits
Score difference with first non-orthologous sequence - C.immitis:584 D.pseudoobscura:584

J3KGE7              	100.00%		Q290L0              	100.00%
Bootstrap support for J3KGE7 as seed ortholog is 100%.
Bootstrap support for Q290L0 as seed ortholog is 100%.

Group of orthologs #196. Best score 583 bits
Score difference with first non-orthologous sequence - C.immitis:287 D.pseudoobscura:32

Q1DP69              	100.00%		Q297X4              	100.00%
                    	       		B5DQY0              	11.10%
                    	       		B5DRG4              	6.09%
Bootstrap support for Q1DP69 as seed ortholog is 100%.
Bootstrap support for Q297X4 as seed ortholog is 54%.
Alternative seed ortholog is Q29J98 (32 bits away from this cluster)

Group of orthologs #197. Best score 582 bits
Score difference with first non-orthologous sequence - C.immitis:582 D.pseudoobscura:582

J3K3W1              	100.00%		Q29HL5              	100.00%
                    	       		Q2M0Z3              	28.93%
Bootstrap support for J3K3W1 as seed ortholog is 100%.
Bootstrap support for Q29HL5 as seed ortholog is 100%.

Group of orthologs #198. Best score 582 bits
Score difference with first non-orthologous sequence - C.immitis:582 D.pseudoobscura:129

Q1DLP2              	100.00%		Q29EW2              	100.00%
                    	       		B5DIK4              	9.37%
Bootstrap support for Q1DLP2 as seed ortholog is 100%.
Bootstrap support for Q29EW2 as seed ortholog is 99%.

Group of orthologs #199. Best score 582 bits
Score difference with first non-orthologous sequence - C.immitis:582 D.pseudoobscura:582

J3K915              	100.00%		B5DH42              	100.00%
Bootstrap support for J3K915 as seed ortholog is 100%.
Bootstrap support for B5DH42 as seed ortholog is 100%.

Group of orthologs #200. Best score 580 bits
Score difference with first non-orthologous sequence - C.immitis:580 D.pseudoobscura:580

J3KE18              	100.00%		Q29IQ0              	100.00%
Bootstrap support for J3KE18 as seed ortholog is 100%.
Bootstrap support for Q29IQ0 as seed ortholog is 100%.

Group of orthologs #201. Best score 576 bits
Score difference with first non-orthologous sequence - C.immitis:576 D.pseudoobscura:576

J3K7D6              	100.00%		B5DKG3              	100.00%
                    	       		Q29JI7              	38.81%
                    	       		B5DPI9              	32.59%
Bootstrap support for J3K7D6 as seed ortholog is 100%.
Bootstrap support for B5DKG3 as seed ortholog is 100%.

Group of orthologs #202. Best score 576 bits
Score difference with first non-orthologous sequence - C.immitis:576 D.pseudoobscura:576

J3KD08              	100.00%		Q296D7              	100.00%
Bootstrap support for J3KD08 as seed ortholog is 100%.
Bootstrap support for Q296D7 as seed ortholog is 100%.

Group of orthologs #203. Best score 576 bits
Score difference with first non-orthologous sequence - C.immitis:576 D.pseudoobscura:576

J3K2S1              	100.00%		Q29K74              	100.00%
Bootstrap support for J3K2S1 as seed ortholog is 100%.
Bootstrap support for Q29K74 as seed ortholog is 100%.

Group of orthologs #204. Best score 573 bits
Score difference with first non-orthologous sequence - C.immitis:286 D.pseudoobscura:356

Q1DQ20              	100.00%		Q29PM0              	100.00%
Bootstrap support for Q1DQ20 as seed ortholog is 100%.
Bootstrap support for Q29PM0 as seed ortholog is 100%.

Group of orthologs #205. Best score 570 bits
Score difference with first non-orthologous sequence - C.immitis:570 D.pseudoobscura:570

J3K3K5              	100.00%		Q292H1              	100.00%
Bootstrap support for J3K3K5 as seed ortholog is 100%.
Bootstrap support for Q292H1 as seed ortholog is 100%.

Group of orthologs #206. Best score 569 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:35

J3KEZ6              	100.00%		B5DWV1              	100.00%
                    	       		Q29B27              	40.54%
                    	       		B5DMS4              	19.82%
Bootstrap support for J3KEZ6 as seed ortholog is 100%.
Bootstrap support for B5DWV1 as seed ortholog is 91%.

Group of orthologs #207. Best score 569 bits
Score difference with first non-orthologous sequence - C.immitis:569 D.pseudoobscura:569

Q1DLC7              	100.00%		B5DKS8              	100.00%
Bootstrap support for Q1DLC7 as seed ortholog is 100%.
Bootstrap support for B5DKS8 as seed ortholog is 100%.

Group of orthologs #208. Best score 567 bits
Score difference with first non-orthologous sequence - C.immitis:347 D.pseudoobscura:567

J3KKN8              	100.00%		Q29KC0              	100.00%
Bootstrap support for J3KKN8 as seed ortholog is 100%.
Bootstrap support for Q29KC0 as seed ortholog is 100%.

Group of orthologs #209. Best score 566 bits
Score difference with first non-orthologous sequence - C.immitis:566 D.pseudoobscura:28

J3K8T5              	100.00%		B5DX90              	100.00%
Bootstrap support for J3K8T5 as seed ortholog is 100%.
Bootstrap support for B5DX90 as seed ortholog is 79%.

Group of orthologs #210. Best score 566 bits
Score difference with first non-orthologous sequence - C.immitis:566 D.pseudoobscura:566

J3KMA0              	100.00%		Q290F7              	100.00%
Bootstrap support for J3KMA0 as seed ortholog is 100%.
Bootstrap support for Q290F7 as seed ortholog is 100%.

Group of orthologs #211. Best score 562 bits
Score difference with first non-orthologous sequence - C.immitis:562 D.pseudoobscura:562

J3KCR8              	100.00%		B5DHZ5              	100.00%
Bootstrap support for J3KCR8 as seed ortholog is 100%.
Bootstrap support for B5DHZ5 as seed ortholog is 100%.

Group of orthologs #212. Best score 562 bits
Score difference with first non-orthologous sequence - C.immitis:220 D.pseudoobscura:208

I9NSJ3              	100.00%		Q29JL1              	100.00%
Bootstrap support for I9NSJ3 as seed ortholog is 99%.
Bootstrap support for Q29JL1 as seed ortholog is 99%.

Group of orthologs #213. Best score 561 bits
Score difference with first non-orthologous sequence - C.immitis:561 D.pseudoobscura:561

J3K2I2              	100.00%		Q292D9              	100.00%
Bootstrap support for J3K2I2 as seed ortholog is 100%.
Bootstrap support for Q292D9 as seed ortholog is 100%.

Group of orthologs #214. Best score 560 bits
Score difference with first non-orthologous sequence - C.immitis:560 D.pseudoobscura:560

J3KAA3              	100.00%		P16340              	100.00%
Bootstrap support for J3KAA3 as seed ortholog is 100%.
Bootstrap support for P16340 as seed ortholog is 100%.

Group of orthologs #215. Best score 559 bits
Score difference with first non-orthologous sequence - C.immitis:309 D.pseudoobscura:377

Q1DI07              	100.00%		Q29NU1              	100.00%
Bootstrap support for Q1DI07 as seed ortholog is 100%.
Bootstrap support for Q29NU1 as seed ortholog is 100%.

Group of orthologs #216. Best score 557 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:198

J3K0L1              	100.00%		B5DIG8              	100.00%
Bootstrap support for J3K0L1 as seed ortholog is 100%.
Bootstrap support for B5DIG8 as seed ortholog is 100%.

Group of orthologs #217. Best score 556 bits
Score difference with first non-orthologous sequence - C.immitis:556 D.pseudoobscura:383

J3KJB8              	100.00%		Q29GK5              	100.00%
Bootstrap support for J3KJB8 as seed ortholog is 100%.
Bootstrap support for Q29GK5 as seed ortholog is 100%.

Group of orthologs #218. Best score 555 bits
Score difference with first non-orthologous sequence - C.immitis:555 D.pseudoobscura:253

J3K7F7              	100.00%		Q29HM7              	100.00%
                    	       		B5DI54              	23.53%
Bootstrap support for J3K7F7 as seed ortholog is 100%.
Bootstrap support for Q29HM7 as seed ortholog is 100%.

Group of orthologs #219. Best score 553 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:43

J3K0X1              	100.00%		B5DH76              	100.00%
                    	       		Q29PH4              	73.60%
Bootstrap support for J3K0X1 as seed ortholog is 99%.
Bootstrap support for B5DH76 as seed ortholog is 86%.

Group of orthologs #220. Best score 553 bits
Score difference with first non-orthologous sequence - C.immitis:553 D.pseudoobscura:553

J3KC37              	100.00%		Q29EN2              	100.00%
Bootstrap support for J3KC37 as seed ortholog is 100%.
Bootstrap support for Q29EN2 as seed ortholog is 100%.

Group of orthologs #221. Best score 553 bits
Score difference with first non-orthologous sequence - C.immitis:446 D.pseudoobscura:553

Q1E9F1              	100.00%		Q29CK6              	100.00%
Bootstrap support for Q1E9F1 as seed ortholog is 100%.
Bootstrap support for Q29CK6 as seed ortholog is 100%.

Group of orthologs #222. Best score 552 bits
Score difference with first non-orthologous sequence - C.immitis:552 D.pseudoobscura:423

J3K8T0              	100.00%		Q297H0              	100.00%
Bootstrap support for J3K8T0 as seed ortholog is 100%.
Bootstrap support for Q297H0 as seed ortholog is 100%.

Group of orthologs #223. Best score 551 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:551

J3KHV7              	100.00%		Q292Q9              	100.00%
Bootstrap support for J3KHV7 as seed ortholog is 99%.
Bootstrap support for Q292Q9 as seed ortholog is 100%.

Group of orthologs #224. Best score 550 bits
Score difference with first non-orthologous sequence - C.immitis:550 D.pseudoobscura:550

J3K6S7              	100.00%		Q2LZ16              	100.00%
Bootstrap support for J3K6S7 as seed ortholog is 100%.
Bootstrap support for Q2LZ16 as seed ortholog is 100%.

Group of orthologs #225. Best score 550 bits
Score difference with first non-orthologous sequence - C.immitis:550 D.pseudoobscura:550

J3KG56              	100.00%		Q29HF0              	100.00%
Bootstrap support for J3KG56 as seed ortholog is 100%.
Bootstrap support for Q29HF0 as seed ortholog is 100%.

Group of orthologs #226. Best score 548 bits
Score difference with first non-orthologous sequence - C.immitis:11 D.pseudoobscura:315

J3KFX9              	100.00%		Q2M106              	100.00%
Bootstrap support for J3KFX9 as seed ortholog is 41%.
Alternative seed ortholog is J3KHN9 (11 bits away from this cluster)
Bootstrap support for Q2M106 as seed ortholog is 100%.

Group of orthologs #227. Best score 544 bits
Score difference with first non-orthologous sequence - C.immitis:544 D.pseudoobscura:544

J3K113              	100.00%		Q28X89              	100.00%
Bootstrap support for J3K113 as seed ortholog is 100%.
Bootstrap support for Q28X89 as seed ortholog is 100%.

Group of orthologs #228. Best score 544 bits
Score difference with first non-orthologous sequence - C.immitis:544 D.pseudoobscura:544

J3K3V9              	100.00%		Q29LQ4              	100.00%
Bootstrap support for J3K3V9 as seed ortholog is 100%.
Bootstrap support for Q29LQ4 as seed ortholog is 100%.

Group of orthologs #229. Best score 540 bits
Score difference with first non-orthologous sequence - C.immitis:540 D.pseudoobscura:540

Q1DXU0              	100.00%		Q295G5              	100.00%
Bootstrap support for Q1DXU0 as seed ortholog is 100%.
Bootstrap support for Q295G5 as seed ortholog is 100%.

Group of orthologs #230. Best score 536 bits
Score difference with first non-orthologous sequence - C.immitis:298 D.pseudoobscura:153

J3K7X3              	100.00%		Q29IA7              	100.00%
Bootstrap support for J3K7X3 as seed ortholog is 100%.
Bootstrap support for Q29IA7 as seed ortholog is 99%.

Group of orthologs #231. Best score 535 bits
Score difference with first non-orthologous sequence - C.immitis:261 D.pseudoobscura:255

Q1E1N5              	100.00%		Q29NS3              	100.00%
Bootstrap support for Q1E1N5 as seed ortholog is 100%.
Bootstrap support for Q29NS3 as seed ortholog is 100%.

Group of orthologs #232. Best score 534 bits
Score difference with first non-orthologous sequence - C.immitis:534 D.pseudoobscura:534

J3KGJ8              	100.00%		Q29CG0              	100.00%
Bootstrap support for J3KGJ8 as seed ortholog is 100%.
Bootstrap support for Q29CG0 as seed ortholog is 100%.

Group of orthologs #233. Best score 529 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:286

J3KE75              	100.00%		Q296Q1              	100.00%
Bootstrap support for J3KE75 as seed ortholog is 99%.
Bootstrap support for Q296Q1 as seed ortholog is 100%.

Group of orthologs #234. Best score 529 bits
Score difference with first non-orthologous sequence - C.immitis:529 D.pseudoobscura:529

J3KHS9              	100.00%		Q29FG9              	100.00%
Bootstrap support for J3KHS9 as seed ortholog is 100%.
Bootstrap support for Q29FG9 as seed ortholog is 100%.

Group of orthologs #235. Best score 529 bits
Score difference with first non-orthologous sequence - C.immitis:529 D.pseudoobscura:458

J3KM79              	100.00%		Q29E99              	100.00%
Bootstrap support for J3KM79 as seed ortholog is 100%.
Bootstrap support for Q29E99 as seed ortholog is 100%.

Group of orthologs #236. Best score 527 bits
Score difference with first non-orthologous sequence - C.immitis:527 D.pseudoobscura:527

J0HHA1              	100.00%		Q29MU9              	100.00%
Bootstrap support for J0HHA1 as seed ortholog is 100%.
Bootstrap support for Q29MU9 as seed ortholog is 100%.

Group of orthologs #237. Best score 526 bits
Score difference with first non-orthologous sequence - C.immitis:526 D.pseudoobscura:526

J3KLS6              	100.00%		Q28Y76              	100.00%
Bootstrap support for J3KLS6 as seed ortholog is 100%.
Bootstrap support for Q28Y76 as seed ortholog is 100%.

Group of orthologs #238. Best score 524 bits
Score difference with first non-orthologous sequence - C.immitis:524 D.pseudoobscura:524

J3K6Z7              	100.00%		B5DKL9              	100.00%
Bootstrap support for J3K6Z7 as seed ortholog is 100%.
Bootstrap support for B5DKL9 as seed ortholog is 100%.

Group of orthologs #239. Best score 524 bits
Score difference with first non-orthologous sequence - C.immitis:524 D.pseudoobscura:524

J3KG09              	100.00%		Q293X5              	100.00%
Bootstrap support for J3KG09 as seed ortholog is 100%.
Bootstrap support for Q293X5 as seed ortholog is 100%.

Group of orthologs #240. Best score 524 bits
Score difference with first non-orthologous sequence - C.immitis:524 D.pseudoobscura:71

J3K3F9              	100.00%		Q29LM8              	100.00%
Bootstrap support for J3K3F9 as seed ortholog is 100%.
Bootstrap support for Q29LM8 as seed ortholog is 81%.

Group of orthologs #241. Best score 523 bits
Score difference with first non-orthologous sequence - C.immitis:523 D.pseudoobscura:523

J3KDF1              	100.00%		Q297I4              	100.00%
Bootstrap support for J3KDF1 as seed ortholog is 100%.
Bootstrap support for Q297I4 as seed ortholog is 100%.

Group of orthologs #242. Best score 523 bits
Score difference with first non-orthologous sequence - C.immitis:400 D.pseudoobscura:523

J3KGG0              	100.00%		Q294A1              	100.00%
Bootstrap support for J3KGG0 as seed ortholog is 100%.
Bootstrap support for Q294A1 as seed ortholog is 100%.

Group of orthologs #243. Best score 519 bits
Score difference with first non-orthologous sequence - C.immitis:519 D.pseudoobscura:519

J3K900              	100.00%		Q29HL8              	100.00%
Bootstrap support for J3K900 as seed ortholog is 100%.
Bootstrap support for Q29HL8 as seed ortholog is 100%.

Group of orthologs #244. Best score 517 bits
Score difference with first non-orthologous sequence - C.immitis:517 D.pseudoobscura:517

Q1DRB6              	100.00%		Q28XF0              	100.00%
Bootstrap support for Q1DRB6 as seed ortholog is 100%.
Bootstrap support for Q28XF0 as seed ortholog is 100%.

Group of orthologs #245. Best score 515 bits
Score difference with first non-orthologous sequence - C.immitis:515 D.pseudoobscura:515

J3KCR7              	100.00%		Q298I1              	100.00%
Bootstrap support for J3KCR7 as seed ortholog is 100%.
Bootstrap support for Q298I1 as seed ortholog is 100%.

Group of orthologs #246. Best score 513 bits
Score difference with first non-orthologous sequence - C.immitis:513 D.pseudoobscura:48

I9XM91              	100.00%		Q29KW9              	100.00%
Bootstrap support for I9XM91 as seed ortholog is 100%.
Bootstrap support for Q29KW9 as seed ortholog is 92%.

Group of orthologs #247. Best score 513 bits
Score difference with first non-orthologous sequence - C.immitis:513 D.pseudoobscura:513

J3K1X3              	100.00%		Q29NR2              	100.00%
Bootstrap support for J3K1X3 as seed ortholog is 100%.
Bootstrap support for Q29NR2 as seed ortholog is 100%.

Group of orthologs #248. Best score 512 bits
Score difference with first non-orthologous sequence - C.immitis:431 D.pseudoobscura:79

J3K3W7              	100.00%		Q2M001              	100.00%
Bootstrap support for J3K3W7 as seed ortholog is 100%.
Bootstrap support for Q2M001 as seed ortholog is 95%.

Group of orthologs #249. Best score 511 bits
Score difference with first non-orthologous sequence - C.immitis:511 D.pseudoobscura:511

J3KEU6              	100.00%		B5DMS2              	100.00%
Bootstrap support for J3KEU6 as seed ortholog is 100%.
Bootstrap support for B5DMS2 as seed ortholog is 100%.

Group of orthologs #250. Best score 511 bits
Score difference with first non-orthologous sequence - C.immitis:511 D.pseudoobscura:511

J3KAU7              	100.00%		Q29LW8              	100.00%
Bootstrap support for J3KAU7 as seed ortholog is 100%.
Bootstrap support for Q29LW8 as seed ortholog is 100%.

Group of orthologs #251. Best score 510 bits
Score difference with first non-orthologous sequence - C.immitis:510 D.pseudoobscura:510

J3KJV9              	100.00%		Q29IV7              	100.00%
Bootstrap support for J3KJV9 as seed ortholog is 100%.
Bootstrap support for Q29IV7 as seed ortholog is 100%.

Group of orthologs #252. Best score 509 bits
Score difference with first non-orthologous sequence - C.immitis:509 D.pseudoobscura:404

J3KJB0              	100.00%		B5DI84              	100.00%
                    	       		B5DI85              	57.77%
                    	       		B5DTJ9              	47.59%
Bootstrap support for J3KJB0 as seed ortholog is 100%.
Bootstrap support for B5DI84 as seed ortholog is 100%.

Group of orthologs #253. Best score 507 bits
Score difference with first non-orthologous sequence - C.immitis:507 D.pseudoobscura:507

J3KKA7              	100.00%		Q2LYV1              	100.00%
Bootstrap support for J3KKA7 as seed ortholog is 100%.
Bootstrap support for Q2LYV1 as seed ortholog is 100%.

Group of orthologs #254. Best score 506 bits
Score difference with first non-orthologous sequence - C.immitis:506 D.pseudoobscura:506

J3K959              	100.00%		Q29FC0              	100.00%
Bootstrap support for J3K959 as seed ortholog is 100%.
Bootstrap support for Q29FC0 as seed ortholog is 100%.

Group of orthologs #255. Best score 506 bits
Score difference with first non-orthologous sequence - C.immitis:506 D.pseudoobscura:287

J3K3I4              	100.00%		Q2M140              	100.00%
Bootstrap support for J3K3I4 as seed ortholog is 100%.
Bootstrap support for Q2M140 as seed ortholog is 100%.

Group of orthologs #256. Best score 505 bits
Score difference with first non-orthologous sequence - C.immitis:505 D.pseudoobscura:425

J3KEM6              	100.00%		Q296K3              	100.00%
Bootstrap support for J3KEM6 as seed ortholog is 100%.
Bootstrap support for Q296K3 as seed ortholog is 100%.

Group of orthologs #257. Best score 504 bits
Score difference with first non-orthologous sequence - C.immitis:504 D.pseudoobscura:504

J3KKJ1              	100.00%		Q29H49              	100.00%
J3KI59              	20.86%		
Bootstrap support for J3KKJ1 as seed ortholog is 100%.
Bootstrap support for Q29H49 as seed ortholog is 100%.

Group of orthologs #258. Best score 504 bits
Score difference with first non-orthologous sequence - C.immitis:504 D.pseudoobscura:504

J3KCS3              	100.00%		Q28ZV5              	100.00%
Bootstrap support for J3KCS3 as seed ortholog is 100%.
Bootstrap support for Q28ZV5 as seed ortholog is 100%.

Group of orthologs #259. Best score 503 bits
Score difference with first non-orthologous sequence - C.immitis:503 D.pseudoobscura:503

J3KDF8              	100.00%		Q298R2              	100.00%
Bootstrap support for J3KDF8 as seed ortholog is 100%.
Bootstrap support for Q298R2 as seed ortholog is 100%.

Group of orthologs #260. Best score 503 bits
Score difference with first non-orthologous sequence - C.immitis:503 D.pseudoobscura:503

Q1E101              	100.00%		Q291J5              	100.00%
Bootstrap support for Q1E101 as seed ortholog is 100%.
Bootstrap support for Q291J5 as seed ortholog is 100%.

Group of orthologs #261. Best score 502 bits
Score difference with first non-orthologous sequence - C.immitis:502 D.pseudoobscura:502

I9XL53              	100.00%		Q29F72              	100.00%
Bootstrap support for I9XL53 as seed ortholog is 100%.
Bootstrap support for Q29F72 as seed ortholog is 100%.

Group of orthologs #262. Best score 502 bits
Score difference with first non-orthologous sequence - C.immitis:502 D.pseudoobscura:274

J3K2E5              	100.00%		Q29FE3              	100.00%
Bootstrap support for J3K2E5 as seed ortholog is 100%.
Bootstrap support for Q29FE3 as seed ortholog is 100%.

Group of orthologs #263. Best score 501 bits
Score difference with first non-orthologous sequence - C.immitis:355 D.pseudoobscura:372

J3KL30              	100.00%		B5DSA2              	100.00%
Bootstrap support for J3KL30 as seed ortholog is 100%.
Bootstrap support for B5DSA2 as seed ortholog is 100%.

Group of orthologs #264. Best score 500 bits
Score difference with first non-orthologous sequence - C.immitis:500 D.pseudoobscura:280

J3K2R2              	100.00%		Q28ZW7              	100.00%
Bootstrap support for J3K2R2 as seed ortholog is 100%.
Bootstrap support for Q28ZW7 as seed ortholog is 100%.

Group of orthologs #265. Best score 500 bits
Score difference with first non-orthologous sequence - C.immitis:500 D.pseudoobscura:425

Q1DXH0              	100.00%		Q290N0              	100.00%
Bootstrap support for Q1DXH0 as seed ortholog is 100%.
Bootstrap support for Q290N0 as seed ortholog is 100%.

Group of orthologs #266. Best score 499 bits
Score difference with first non-orthologous sequence - C.immitis:499 D.pseudoobscura:218

J3K9A8              	100.00%		Q291L4              	100.00%
Bootstrap support for J3K9A8 as seed ortholog is 100%.
Bootstrap support for Q291L4 as seed ortholog is 99%.

Group of orthologs #267. Best score 497 bits
Score difference with first non-orthologous sequence - C.immitis:497 D.pseudoobscura:497

J3K1F7              	100.00%		Q29AJ7              	100.00%
Bootstrap support for J3K1F7 as seed ortholog is 100%.
Bootstrap support for Q29AJ7 as seed ortholog is 100%.

Group of orthologs #268. Best score 497 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:497

J3K9H6              	100.00%		Q298Q8              	100.00%
Bootstrap support for J3K9H6 as seed ortholog is 100%.
Bootstrap support for Q298Q8 as seed ortholog is 100%.

Group of orthologs #269. Best score 496 bits
Score difference with first non-orthologous sequence - C.immitis:496 D.pseudoobscura:203

I9NM26              	100.00%		B5DWN6              	100.00%
Bootstrap support for I9NM26 as seed ortholog is 100%.
Bootstrap support for B5DWN6 as seed ortholog is 99%.

Group of orthologs #270. Best score 495 bits
Score difference with first non-orthologous sequence - C.immitis:495 D.pseudoobscura:397

J3K1Y2              	100.00%		Q29HL9              	100.00%
Bootstrap support for J3K1Y2 as seed ortholog is 100%.
Bootstrap support for Q29HL9 as seed ortholog is 100%.

Group of orthologs #271. Best score 495 bits
Score difference with first non-orthologous sequence - C.immitis:495 D.pseudoobscura:347

J3K5I9              	100.00%		Q2M109              	100.00%
Bootstrap support for J3K5I9 as seed ortholog is 100%.
Bootstrap support for Q2M109 as seed ortholog is 100%.

Group of orthologs #272. Best score 494 bits
Score difference with first non-orthologous sequence - C.immitis:349 D.pseudoobscura:494

Q1EB31              	100.00%		Q29JE3              	100.00%
Bootstrap support for Q1EB31 as seed ortholog is 100%.
Bootstrap support for Q29JE3 as seed ortholog is 100%.

Group of orthologs #273. Best score 493 bits
Score difference with first non-orthologous sequence - C.immitis:493 D.pseudoobscura:238

J3KKJ4              	100.00%		Q29H77              	100.00%
Bootstrap support for J3KKJ4 as seed ortholog is 100%.
Bootstrap support for Q29H77 as seed ortholog is 100%.

Group of orthologs #274. Best score 493 bits
Score difference with first non-orthologous sequence - C.immitis:493 D.pseudoobscura:493

J3KJ55              	100.00%		Q29M34              	100.00%
Bootstrap support for J3KJ55 as seed ortholog is 100%.
Bootstrap support for Q29M34 as seed ortholog is 100%.

Group of orthologs #275. Best score 492 bits
Score difference with first non-orthologous sequence - C.immitis:492 D.pseudoobscura:436

J3K5D2              	100.00%		B5DYU6              	100.00%
Bootstrap support for J3K5D2 as seed ortholog is 100%.
Bootstrap support for B5DYU6 as seed ortholog is 100%.

Group of orthologs #276. Best score 492 bits
Score difference with first non-orthologous sequence - C.immitis:492 D.pseudoobscura:303

J3KJH2              	100.00%		Q29LN4              	100.00%
Bootstrap support for J3KJH2 as seed ortholog is 100%.
Bootstrap support for Q29LN4 as seed ortholog is 100%.

Group of orthologs #277. Best score 490 bits
Score difference with first non-orthologous sequence - C.immitis:358 D.pseudoobscura:346

J3K9Y9              	100.00%		Q2M042              	100.00%
Bootstrap support for J3K9Y9 as seed ortholog is 100%.
Bootstrap support for Q2M042 as seed ortholog is 100%.

Group of orthologs #278. Best score 489 bits
Score difference with first non-orthologous sequence - C.immitis:489 D.pseudoobscura:489

J3KKM2              	100.00%		B5DIC2              	100.00%
Bootstrap support for J3KKM2 as seed ortholog is 100%.
Bootstrap support for B5DIC2 as seed ortholog is 100%.

Group of orthologs #279. Best score 489 bits
Score difference with first non-orthologous sequence - C.immitis:347 D.pseudoobscura:193

J3K0A9              	100.00%		Q29HF5              	100.00%
Bootstrap support for J3K0A9 as seed ortholog is 100%.
Bootstrap support for Q29HF5 as seed ortholog is 99%.

Group of orthologs #280. Best score 489 bits
Score difference with first non-orthologous sequence - C.immitis:39 D.pseudoobscura:489

J3KKY6              	100.00%		Q28WX8              	100.00%
Bootstrap support for J3KKY6 as seed ortholog is 77%.
Bootstrap support for Q28WX8 as seed ortholog is 100%.

Group of orthologs #281. Best score 488 bits
Score difference with first non-orthologous sequence - C.immitis:488 D.pseudoobscura:488

Q1E873              	100.00%		Q28Y86              	100.00%
Bootstrap support for Q1E873 as seed ortholog is 100%.
Bootstrap support for Q28Y86 as seed ortholog is 100%.

Group of orthologs #282. Best score 487 bits
Score difference with first non-orthologous sequence - C.immitis:487 D.pseudoobscura:487

J3K6P7              	100.00%		B5DI77              	100.00%
Bootstrap support for J3K6P7 as seed ortholog is 100%.
Bootstrap support for B5DI77 as seed ortholog is 100%.

Group of orthologs #283. Best score 487 bits
Score difference with first non-orthologous sequence - C.immitis:487 D.pseudoobscura:225

J3KL08              	100.00%		Q293G5              	100.00%
Bootstrap support for J3KL08 as seed ortholog is 100%.
Bootstrap support for Q293G5 as seed ortholog is 100%.

Group of orthologs #284. Best score 485 bits
Score difference with first non-orthologous sequence - C.immitis:485 D.pseudoobscura:225

I9NT37              	100.00%		Q299N6              	100.00%
Bootstrap support for I9NT37 as seed ortholog is 100%.
Bootstrap support for Q299N6 as seed ortholog is 99%.

Group of orthologs #285. Best score 483 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:483

J3KDN8              	100.00%		Q2M0D6              	100.00%
                    	       		Q29JU0              	51.22%
Bootstrap support for J3KDN8 as seed ortholog is 99%.
Bootstrap support for Q2M0D6 as seed ortholog is 100%.

Group of orthologs #286. Best score 482 bits
Score difference with first non-orthologous sequence - C.immitis:386 D.pseudoobscura:482

J3KM87              	100.00%		Q295J1              	100.00%
Bootstrap support for J3KM87 as seed ortholog is 100%.
Bootstrap support for Q295J1 as seed ortholog is 100%.

Group of orthologs #287. Best score 481 bits
Score difference with first non-orthologous sequence - C.immitis:481 D.pseudoobscura:481

J3KI46              	100.00%		I5AP61              	100.00%
Bootstrap support for J3KI46 as seed ortholog is 100%.
Bootstrap support for I5AP61 as seed ortholog is 100%.

Group of orthologs #288. Best score 480 bits
Score difference with first non-orthologous sequence - C.immitis:167 D.pseudoobscura:480

J3KD99              	100.00%		Q29NC1              	100.00%
Bootstrap support for J3KD99 as seed ortholog is 99%.
Bootstrap support for Q29NC1 as seed ortholog is 100%.

Group of orthologs #289. Best score 478 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:193

I9NNQ1              	100.00%		Q29K63              	100.00%
                    	       		Q29LW7              	5.45%
Bootstrap support for I9NNQ1 as seed ortholog is 86%.
Bootstrap support for Q29K63 as seed ortholog is 99%.

Group of orthologs #290. Best score 477 bits
Score difference with first non-orthologous sequence - C.immitis:477 D.pseudoobscura:477

Q1E6U9              	100.00%		B5DZI1              	100.00%
Bootstrap support for Q1E6U9 as seed ortholog is 100%.
Bootstrap support for B5DZI1 as seed ortholog is 100%.

Group of orthologs #291. Best score 476 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:144

J3K1M5              	100.00%		Q296G7              	100.00%
Bootstrap support for J3K1M5 as seed ortholog is 95%.
Bootstrap support for Q296G7 as seed ortholog is 99%.

Group of orthologs #292. Best score 475 bits
Score difference with first non-orthologous sequence - C.immitis:475 D.pseudoobscura:475

J3KHH3              	100.00%		Q29G09              	100.00%
Bootstrap support for J3KHH3 as seed ortholog is 100%.
Bootstrap support for Q29G09 as seed ortholog is 100%.

Group of orthologs #293. Best score 475 bits
Score difference with first non-orthologous sequence - C.immitis:475 D.pseudoobscura:475

J3KBW1              	100.00%		Q2M0L7              	100.00%
Bootstrap support for J3KBW1 as seed ortholog is 100%.
Bootstrap support for Q2M0L7 as seed ortholog is 100%.

Group of orthologs #294. Best score 474 bits
Score difference with first non-orthologous sequence - C.immitis:474 D.pseudoobscura:143

J3K4I6              	100.00%		Q29HY8              	100.00%
Bootstrap support for J3K4I6 as seed ortholog is 100%.
Bootstrap support for Q29HY8 as seed ortholog is 99%.

Group of orthologs #295. Best score 473 bits
Score difference with first non-orthologous sequence - C.immitis:427 D.pseudoobscura:102

I9XMD5              	100.00%		B5DSF9              	100.00%
Bootstrap support for I9XMD5 as seed ortholog is 100%.
Bootstrap support for B5DSF9 as seed ortholog is 99%.

Group of orthologs #296. Best score 472 bits
Score difference with first non-orthologous sequence - C.immitis:368 D.pseudoobscura:472

J3KFB7              	100.00%		Q28YP5              	100.00%
Bootstrap support for J3KFB7 as seed ortholog is 100%.
Bootstrap support for Q28YP5 as seed ortholog is 100%.

Group of orthologs #297. Best score 471 bits
Score difference with first non-orthologous sequence - C.immitis:471 D.pseudoobscura:270

J3K7N4              	100.00%		B5DYB4              	100.00%
Bootstrap support for J3K7N4 as seed ortholog is 100%.
Bootstrap support for B5DYB4 as seed ortholog is 100%.

Group of orthologs #298. Best score 470 bits
Score difference with first non-orthologous sequence - C.immitis:470 D.pseudoobscura:470

J3K2V2              	100.00%		Q28YK7              	100.00%
Bootstrap support for J3K2V2 as seed ortholog is 100%.
Bootstrap support for Q28YK7 as seed ortholog is 100%.

Group of orthologs #299. Best score 469 bits
Score difference with first non-orthologous sequence - C.immitis:469 D.pseudoobscura:469

J3KC33              	100.00%		Q291S8              	100.00%
Bootstrap support for J3KC33 as seed ortholog is 100%.
Bootstrap support for Q291S8 as seed ortholog is 100%.

Group of orthologs #300. Best score 469 bits
Score difference with first non-orthologous sequence - C.immitis:469 D.pseudoobscura:469

J3K7H1              	100.00%		Q29GU5              	100.00%
Bootstrap support for J3K7H1 as seed ortholog is 100%.
Bootstrap support for Q29GU5 as seed ortholog is 100%.

Group of orthologs #301. Best score 469 bits
Score difference with first non-orthologous sequence - C.immitis:469 D.pseudoobscura:469

J3KKK2              	100.00%		Q298T8              	100.00%
Bootstrap support for J3KKK2 as seed ortholog is 100%.
Bootstrap support for Q298T8 as seed ortholog is 100%.

Group of orthologs #302. Best score 469 bits
Score difference with first non-orthologous sequence - C.immitis:469 D.pseudoobscura:138

J3KLQ2              	100.00%		Q29HB3              	100.00%
Bootstrap support for J3KLQ2 as seed ortholog is 100%.
Bootstrap support for Q29HB3 as seed ortholog is 99%.

Group of orthologs #303. Best score 467 bits
Score difference with first non-orthologous sequence - C.immitis:467 D.pseudoobscura:103

J3KHB6              	100.00%		Q299V2              	100.00%
Bootstrap support for J3KHB6 as seed ortholog is 100%.
Bootstrap support for Q299V2 as seed ortholog is 99%.

Group of orthologs #304. Best score 467 bits
Score difference with first non-orthologous sequence - C.immitis:467 D.pseudoobscura:410

J3KDW5              	100.00%		Q29FE2              	100.00%
Bootstrap support for J3KDW5 as seed ortholog is 100%.
Bootstrap support for Q29FE2 as seed ortholog is 100%.

Group of orthologs #305. Best score 466 bits
Score difference with first non-orthologous sequence - C.immitis:466 D.pseudoobscura:466

J3K2G0              	100.00%		Q292K5              	100.00%
Bootstrap support for J3K2G0 as seed ortholog is 100%.
Bootstrap support for Q292K5 as seed ortholog is 100%.

Group of orthologs #306. Best score 465 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:325

J3K569              	100.00%		Q29DE7              	100.00%
Bootstrap support for J3K569 as seed ortholog is 100%.
Bootstrap support for Q29DE7 as seed ortholog is 100%.

Group of orthologs #307. Best score 465 bits
Score difference with first non-orthologous sequence - C.immitis:465 D.pseudoobscura:465

J3KII3              	100.00%		Q294Y6              	100.00%
Bootstrap support for J3KII3 as seed ortholog is 100%.
Bootstrap support for Q294Y6 as seed ortholog is 100%.

Group of orthologs #308. Best score 464 bits
Score difference with first non-orthologous sequence - C.immitis:24 D.pseudoobscura:78

J3KIZ2              	100.00%		I5APA0              	100.00%
Bootstrap support for J3KIZ2 as seed ortholog is 78%.
Bootstrap support for I5APA0 as seed ortholog is 99%.

Group of orthologs #309. Best score 463 bits
Score difference with first non-orthologous sequence - C.immitis:463 D.pseudoobscura:463

Q1E406              	100.00%		Q29EJ7              	100.00%
Bootstrap support for Q1E406 as seed ortholog is 100%.
Bootstrap support for Q29EJ7 as seed ortholog is 100%.

Group of orthologs #310. Best score 462 bits
Score difference with first non-orthologous sequence - C.immitis:351 D.pseudoobscura:144

J3K2S5              	100.00%		Q290E9              	100.00%
Bootstrap support for J3K2S5 as seed ortholog is 100%.
Bootstrap support for Q290E9 as seed ortholog is 99%.

Group of orthologs #311. Best score 461 bits
Score difference with first non-orthologous sequence - C.immitis:253 D.pseudoobscura:119

I9NSV7              	100.00%		I5ANU0              	100.00%
                    	       		Q290K1              	8.70%
Bootstrap support for I9NSV7 as seed ortholog is 100%.
Bootstrap support for I5ANU0 as seed ortholog is 97%.

Group of orthologs #312. Best score 461 bits
Score difference with first non-orthologous sequence - C.immitis:411 D.pseudoobscura:30

I9XIU9              	100.00%		Q29CD4              	100.00%
J3KAY6              	38.90%		
Bootstrap support for I9XIU9 as seed ortholog is 100%.
Bootstrap support for Q29CD4 as seed ortholog is 85%.

Group of orthologs #313. Best score 460 bits
Score difference with first non-orthologous sequence - C.immitis:460 D.pseudoobscura:460

J3K4B3              	100.00%		Q293H1              	100.00%
Bootstrap support for J3K4B3 as seed ortholog is 100%.
Bootstrap support for Q293H1 as seed ortholog is 100%.

Group of orthologs #314. Best score 460 bits
Score difference with first non-orthologous sequence - C.immitis:460 D.pseudoobscura:460

J3KE22              	100.00%		Q29HD7              	100.00%
Bootstrap support for J3KE22 as seed ortholog is 100%.
Bootstrap support for Q29HD7 as seed ortholog is 100%.

Group of orthologs #315. Best score 460 bits
Score difference with first non-orthologous sequence - C.immitis:460 D.pseudoobscura:227

J3KIP9              	100.00%		Q29KT9              	100.00%
Bootstrap support for J3KIP9 as seed ortholog is 100%.
Bootstrap support for Q29KT9 as seed ortholog is 99%.

Group of orthologs #316. Best score 459 bits
Score difference with first non-orthologous sequence - C.immitis:244 D.pseudoobscura:150

J3KAF9              	100.00%		Q291R3              	100.00%
Bootstrap support for J3KAF9 as seed ortholog is 100%.
Bootstrap support for Q291R3 as seed ortholog is 99%.

Group of orthologs #317. Best score 458 bits
Score difference with first non-orthologous sequence - C.immitis:458 D.pseudoobscura:53

Q1DTF9              	100.00%		O44104              	100.00%
Bootstrap support for Q1DTF9 as seed ortholog is 100%.
Bootstrap support for O44104 as seed ortholog is 96%.

Group of orthologs #318. Best score 457 bits
Score difference with first non-orthologous sequence - C.immitis:457 D.pseudoobscura:62

J3K6E3              	100.00%		B5DYI6              	100.00%
Bootstrap support for J3K6E3 as seed ortholog is 100%.
Bootstrap support for B5DYI6 as seed ortholog is 98%.

Group of orthologs #319. Best score 456 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:70

J3K2J5              	100.00%		Q29IH5              	100.00%
                    	       		B5DIB4              	34.05%
Bootstrap support for J3K2J5 as seed ortholog is 94%.
Bootstrap support for Q29IH5 as seed ortholog is 96%.

Group of orthologs #320. Best score 456 bits
Score difference with first non-orthologous sequence - C.immitis:456 D.pseudoobscura:45

J3K207              	100.00%		Q28ZS9              	100.00%
Bootstrap support for J3K207 as seed ortholog is 100%.
Bootstrap support for Q28ZS9 as seed ortholog is 91%.

Group of orthologs #321. Best score 456 bits
Score difference with first non-orthologous sequence - C.immitis:456 D.pseudoobscura:456

J3KE12              	100.00%		Q299D2              	100.00%
Bootstrap support for J3KE12 as seed ortholog is 100%.
Bootstrap support for Q299D2 as seed ortholog is 100%.

Group of orthologs #322. Best score 456 bits
Score difference with first non-orthologous sequence - C.immitis:456 D.pseudoobscura:456

J3KM11              	100.00%		Q29IL2              	100.00%
Bootstrap support for J3KM11 as seed ortholog is 100%.
Bootstrap support for Q29IL2 as seed ortholog is 100%.

Group of orthologs #323. Best score 455 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:110

J3K4E3              	100.00%		Q29G84              	100.00%
Bootstrap support for J3K4E3 as seed ortholog is 99%.
Bootstrap support for Q29G84 as seed ortholog is 99%.

Group of orthologs #324. Best score 453 bits
Score difference with first non-orthologous sequence - C.immitis:453 D.pseudoobscura:380

J3K8Y3              	100.00%		Q294C5              	100.00%
                    	       		B5DXF8              	33.93%
Bootstrap support for J3K8Y3 as seed ortholog is 100%.
Bootstrap support for Q294C5 as seed ortholog is 100%.

Group of orthologs #325. Best score 452 bits
Score difference with first non-orthologous sequence - C.immitis:452 D.pseudoobscura:452

J3KH82              	100.00%		Q29G49              	100.00%
Bootstrap support for J3KH82 as seed ortholog is 100%.
Bootstrap support for Q29G49 as seed ortholog is 100%.

Group of orthologs #326. Best score 451 bits
Score difference with first non-orthologous sequence - C.immitis:451 D.pseudoobscura:451

Q1E1Q5              	100.00%		B5DK75              	100.00%
Bootstrap support for Q1E1Q5 as seed ortholog is 100%.
Bootstrap support for B5DK75 as seed ortholog is 100%.

Group of orthologs #327. Best score 451 bits
Score difference with first non-orthologous sequence - C.immitis:390 D.pseudoobscura:451

J3KIZ6              	100.00%		Q28XT3              	100.00%
Bootstrap support for J3KIZ6 as seed ortholog is 100%.
Bootstrap support for Q28XT3 as seed ortholog is 100%.

Group of orthologs #328. Best score 451 bits
Score difference with first non-orthologous sequence - C.immitis:451 D.pseudoobscura:184

Q1E5T3              	100.00%		Q29IY5              	100.00%
Bootstrap support for Q1E5T3 as seed ortholog is 100%.
Bootstrap support for Q29IY5 as seed ortholog is 98%.

Group of orthologs #329. Best score 450 bits
Score difference with first non-orthologous sequence - C.immitis:338 D.pseudoobscura:298

J3KH70              	100.00%		Q29PD4              	100.00%
Bootstrap support for J3KH70 as seed ortholog is 100%.
Bootstrap support for Q29PD4 as seed ortholog is 100%.

Group of orthologs #330. Best score 449 bits
Score difference with first non-orthologous sequence - C.immitis:290 D.pseudoobscura:251

J3KM48              	100.00%		Q29BB9              	100.00%
Bootstrap support for J3KM48 as seed ortholog is 100%.
Bootstrap support for Q29BB9 as seed ortholog is 100%.

Group of orthologs #331. Best score 448 bits
Score difference with first non-orthologous sequence - C.immitis:448 D.pseudoobscura:111

J3KJS5              	100.00%		Q28X45              	100.00%
Bootstrap support for J3KJS5 as seed ortholog is 100%.
Bootstrap support for Q28X45 as seed ortholog is 99%.

Group of orthologs #332. Best score 448 bits
Score difference with first non-orthologous sequence - C.immitis:448 D.pseudoobscura:448

J3KFP3              	100.00%		Q295Z3              	100.00%
Bootstrap support for J3KFP3 as seed ortholog is 100%.
Bootstrap support for Q295Z3 as seed ortholog is 100%.

Group of orthologs #333. Best score 448 bits
Score difference with first non-orthologous sequence - C.immitis:448 D.pseudoobscura:448

J3KEJ1              	100.00%		Q29C41              	100.00%
Bootstrap support for J3KEJ1 as seed ortholog is 100%.
Bootstrap support for Q29C41 as seed ortholog is 100%.

Group of orthologs #334. Best score 448 bits
Score difference with first non-orthologous sequence - C.immitis:448 D.pseudoobscura:448

J3K7V4              	100.00%		Q29MI2              	100.00%
Bootstrap support for J3K7V4 as seed ortholog is 100%.
Bootstrap support for Q29MI2 as seed ortholog is 100%.

Group of orthologs #335. Best score 447 bits
Score difference with first non-orthologous sequence - C.immitis:378 D.pseudoobscura:447

J3KJS4              	100.00%		Q295Y7              	100.00%
Bootstrap support for J3KJS4 as seed ortholog is 100%.
Bootstrap support for Q295Y7 as seed ortholog is 100%.

Group of orthologs #336. Best score 446 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:446

J0HF14              	100.00%		Q29FT0              	100.00%
Bootstrap support for J0HF14 as seed ortholog is 100%.
Bootstrap support for Q29FT0 as seed ortholog is 100%.

Group of orthologs #337. Best score 446 bits
Score difference with first non-orthologous sequence - C.immitis:446 D.pseudoobscura:446

J3KAW8              	100.00%		Q29AI0              	100.00%
Bootstrap support for J3KAW8 as seed ortholog is 100%.
Bootstrap support for Q29AI0 as seed ortholog is 100%.

Group of orthologs #338. Best score 445 bits
Score difference with first non-orthologous sequence - C.immitis:445 D.pseudoobscura:445

J3KIP7              	100.00%		Q290F6              	100.00%
Bootstrap support for J3KIP7 as seed ortholog is 100%.
Bootstrap support for Q290F6 as seed ortholog is 100%.

Group of orthologs #339. Best score 445 bits
Score difference with first non-orthologous sequence - C.immitis:321 D.pseudoobscura:348

J3KI63              	100.00%		Q297C4              	100.00%
Bootstrap support for J3KI63 as seed ortholog is 100%.
Bootstrap support for Q297C4 as seed ortholog is 100%.

Group of orthologs #340. Best score 445 bits
Score difference with first non-orthologous sequence - C.immitis:364 D.pseudoobscura:317

J3K583              	100.00%		Q29PI0              	100.00%
Bootstrap support for J3K583 as seed ortholog is 100%.
Bootstrap support for Q29PI0 as seed ortholog is 100%.

Group of orthologs #341. Best score 444 bits
Score difference with first non-orthologous sequence - C.immitis:444 D.pseudoobscura:169

J3KJS6              	100.00%		Q29EQ6              	100.00%
J3K050              	24.82%		
Bootstrap support for J3KJS6 as seed ortholog is 100%.
Bootstrap support for Q29EQ6 as seed ortholog is 99%.

Group of orthologs #342. Best score 444 bits
Score difference with first non-orthologous sequence - C.immitis:444 D.pseudoobscura:326

J3K5Z5              	100.00%		Q291A7              	100.00%
Bootstrap support for J3K5Z5 as seed ortholog is 100%.
Bootstrap support for Q291A7 as seed ortholog is 100%.

Group of orthologs #343. Best score 444 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:444

J3K1M8              	100.00%		Q2M1A6              	100.00%
Bootstrap support for J3K1M8 as seed ortholog is 99%.
Bootstrap support for Q2M1A6 as seed ortholog is 100%.

Group of orthologs #344. Best score 443 bits
Score difference with first non-orthologous sequence - C.immitis:443 D.pseudoobscura:443

J3K2Y5              	100.00%		Q29CJ5              	100.00%
Bootstrap support for J3K2Y5 as seed ortholog is 100%.
Bootstrap support for Q29CJ5 as seed ortholog is 100%.

Group of orthologs #345. Best score 443 bits
Score difference with first non-orthologous sequence - C.immitis:443 D.pseudoobscura:443

J3KBE4              	100.00%		Q299D3              	100.00%
Bootstrap support for J3KBE4 as seed ortholog is 100%.
Bootstrap support for Q299D3 as seed ortholog is 100%.

Group of orthologs #346. Best score 442 bits
Score difference with first non-orthologous sequence - C.immitis:442 D.pseudoobscura:356

J3K5B6              	100.00%		Q297T9              	100.00%
Bootstrap support for J3K5B6 as seed ortholog is 100%.
Bootstrap support for Q297T9 as seed ortholog is 100%.

Group of orthologs #347. Best score 441 bits
Score difference with first non-orthologous sequence - C.immitis:200 D.pseudoobscura:154

J3K9T6              	100.00%		Q2M086              	100.00%
Bootstrap support for J3K9T6 as seed ortholog is 99%.
Bootstrap support for Q2M086 as seed ortholog is 99%.

Group of orthologs #348. Best score 441 bits
Score difference with first non-orthologous sequence - C.immitis:234 D.pseudoobscura:313

J3KGI0              	100.00%		Q29JN6              	100.00%
Bootstrap support for J3KGI0 as seed ortholog is 99%.
Bootstrap support for Q29JN6 as seed ortholog is 100%.

Group of orthologs #349. Best score 440 bits
Score difference with first non-orthologous sequence - C.immitis:236 D.pseudoobscura:80

J3K9R5              	100.00%		Q29IW3              	100.00%
Bootstrap support for J3K9R5 as seed ortholog is 100%.
Bootstrap support for Q29IW3 as seed ortholog is 99%.

Group of orthologs #350. Best score 439 bits
Score difference with first non-orthologous sequence - C.immitis:439 D.pseudoobscura:439

J3KD94              	100.00%		B5DPA2              	100.00%
Bootstrap support for J3KD94 as seed ortholog is 100%.
Bootstrap support for B5DPA2 as seed ortholog is 100%.

Group of orthologs #351. Best score 439 bits
Score difference with first non-orthologous sequence - C.immitis:439 D.pseudoobscura:439

J3KHA4              	100.00%		Q29GF4              	100.00%
Bootstrap support for J3KHA4 as seed ortholog is 100%.
Bootstrap support for Q29GF4 as seed ortholog is 100%.

Group of orthologs #352. Best score 438 bits
Score difference with first non-orthologous sequence - C.immitis:438 D.pseudoobscura:438

I9NPQ2              	100.00%		Q28ZL9              	100.00%
Bootstrap support for I9NPQ2 as seed ortholog is 100%.
Bootstrap support for Q28ZL9 as seed ortholog is 100%.

Group of orthologs #353. Best score 438 bits
Score difference with first non-orthologous sequence - C.immitis:74 D.pseudoobscura:438

J3KHE3              	100.00%		B5DLH5              	100.00%
Bootstrap support for J3KHE3 as seed ortholog is 91%.
Bootstrap support for B5DLH5 as seed ortholog is 100%.

Group of orthologs #354. Best score 438 bits
Score difference with first non-orthologous sequence - C.immitis:438 D.pseudoobscura:438

J3K8X6              	100.00%		Q29GX2              	100.00%
Bootstrap support for J3K8X6 as seed ortholog is 100%.
Bootstrap support for Q29GX2 as seed ortholog is 100%.

Group of orthologs #355. Best score 436 bits
Score difference with first non-orthologous sequence - C.immitis:436 D.pseudoobscura:436

J3K348              	100.00%		Q29JL9              	100.00%
Bootstrap support for J3K348 as seed ortholog is 100%.
Bootstrap support for Q29JL9 as seed ortholog is 100%.

Group of orthologs #356. Best score 436 bits
Score difference with first non-orthologous sequence - C.immitis:382 D.pseudoobscura:346

J3K2A0              	100.00%		Q29MB0              	100.00%
Bootstrap support for J3K2A0 as seed ortholog is 100%.
Bootstrap support for Q29MB0 as seed ortholog is 100%.

Group of orthologs #357. Best score 435 bits
Score difference with first non-orthologous sequence - C.immitis:435 D.pseudoobscura:435

J3K8K8              	100.00%		Q28X80              	100.00%
Bootstrap support for J3K8K8 as seed ortholog is 100%.
Bootstrap support for Q28X80 as seed ortholog is 100%.

Group of orthologs #358. Best score 433 bits
Score difference with first non-orthologous sequence - C.immitis:193 D.pseudoobscura:433

J3KG86              	100.00%		Q296L9              	100.00%
Bootstrap support for J3KG86 as seed ortholog is 99%.
Bootstrap support for Q296L9 as seed ortholog is 100%.

Group of orthologs #359. Best score 431 bits
Score difference with first non-orthologous sequence - C.immitis:431 D.pseudoobscura:431

Q1EB38              	100.00%		Q29ER5              	100.00%
Bootstrap support for Q1EB38 as seed ortholog is 100%.
Bootstrap support for Q29ER5 as seed ortholog is 100%.

Group of orthologs #360. Best score 430 bits
Score difference with first non-orthologous sequence - C.immitis:374 D.pseudoobscura:430

J3KDD7              	100.00%		Q29MG3              	100.00%
J3KAI9              	22.64%		
Bootstrap support for J3KDD7 as seed ortholog is 100%.
Bootstrap support for Q29MG3 as seed ortholog is 100%.

Group of orthologs #361. Best score 430 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:151

J3KB82              	100.00%		Q2M0E5              	100.00%
Bootstrap support for J3KB82 as seed ortholog is 100%.
Bootstrap support for Q2M0E5 as seed ortholog is 99%.

Group of orthologs #362. Best score 429 bits
Score difference with first non-orthologous sequence - C.immitis:429 D.pseudoobscura:429

Q1E803              	100.00%		Q29DD3              	100.00%
J3KJI5              	5.85%		
Bootstrap support for Q1E803 as seed ortholog is 100%.
Bootstrap support for Q29DD3 as seed ortholog is 100%.

Group of orthologs #363. Best score 429 bits
Score difference with first non-orthologous sequence - C.immitis:429 D.pseudoobscura:328

J0HFZ5              	100.00%		Q29EV0              	100.00%
Bootstrap support for J0HFZ5 as seed ortholog is 100%.
Bootstrap support for Q29EV0 as seed ortholog is 100%.

Group of orthologs #364. Best score 429 bits
Score difference with first non-orthologous sequence - C.immitis:429 D.pseudoobscura:429

J3K1D5              	100.00%		Q29GJ5              	100.00%
Bootstrap support for J3K1D5 as seed ortholog is 100%.
Bootstrap support for Q29GJ5 as seed ortholog is 100%.

Group of orthologs #365. Best score 429 bits
Score difference with first non-orthologous sequence - C.immitis:429 D.pseudoobscura:253

J3KIM8              	100.00%		Q29FL9              	100.00%
Bootstrap support for J3KIM8 as seed ortholog is 100%.
Bootstrap support for Q29FL9 as seed ortholog is 99%.

Group of orthologs #366. Best score 428 bits
Score difference with first non-orthologous sequence - C.immitis:428 D.pseudoobscura:428

J3K2B1              	100.00%		Q29H28              	100.00%
                    	       		Q29NQ0              	23.38%
Bootstrap support for J3K2B1 as seed ortholog is 100%.
Bootstrap support for Q29H28 as seed ortholog is 100%.

Group of orthologs #367. Best score 427 bits
Score difference with first non-orthologous sequence - C.immitis:266 D.pseudoobscura:164

J3K9H4              	100.00%		Q29CZ7              	100.00%
Bootstrap support for J3K9H4 as seed ortholog is 100%.
Bootstrap support for Q29CZ7 as seed ortholog is 100%.

Group of orthologs #368. Best score 425 bits
Score difference with first non-orthologous sequence - C.immitis:425 D.pseudoobscura:425

J3K417              	100.00%		Q29HV6              	100.00%
Bootstrap support for J3K417 as seed ortholog is 100%.
Bootstrap support for Q29HV6 as seed ortholog is 100%.

Group of orthologs #369. Best score 425 bits
Score difference with first non-orthologous sequence - C.immitis:425 D.pseudoobscura:425

J3K782              	100.00%		Q29FQ4              	100.00%
Bootstrap support for J3K782 as seed ortholog is 100%.
Bootstrap support for Q29FQ4 as seed ortholog is 100%.

Group of orthologs #370. Best score 425 bits
Score difference with first non-orthologous sequence - C.immitis:425 D.pseudoobscura:425

J3K9D3              	100.00%		Q29ES0              	100.00%
Bootstrap support for J3K9D3 as seed ortholog is 100%.
Bootstrap support for Q29ES0 as seed ortholog is 100%.

Group of orthologs #371. Best score 425 bits
Score difference with first non-orthologous sequence - C.immitis:425 D.pseudoobscura:425

J3K6I5              	100.00%		Q29LG2              	100.00%
Bootstrap support for J3K6I5 as seed ortholog is 100%.
Bootstrap support for Q29LG2 as seed ortholog is 100%.

Group of orthologs #372. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:423 D.pseudoobscura:168

J3KI25              	100.00%		I5ANG0              	100.00%
                    	       		I5ANP5              	23.97%
                    	       		B5DZU7              	16.40%
                    	       		Q291T3              	12.73%
Bootstrap support for J3KI25 as seed ortholog is 100%.
Bootstrap support for I5ANG0 as seed ortholog is 99%.

Group of orthologs #373. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:423 D.pseudoobscura:423

J3K358              	100.00%		Q29L99              	100.00%
Bootstrap support for J3K358 as seed ortholog is 100%.
Bootstrap support for Q29L99 as seed ortholog is 100%.

Group of orthologs #374. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:423 D.pseudoobscura:255

J3K7Q1              	100.00%		Q29J05              	100.00%
Bootstrap support for J3K7Q1 as seed ortholog is 100%.
Bootstrap support for Q29J05 as seed ortholog is 100%.

Group of orthologs #375. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:423 D.pseudoobscura:423

J3KH50              	100.00%		Q29JS0              	100.00%
Bootstrap support for J3KH50 as seed ortholog is 100%.
Bootstrap support for Q29JS0 as seed ortholog is 100%.

Group of orthologs #376. Best score 422 bits
Score difference with first non-orthologous sequence - C.immitis:422 D.pseudoobscura:422

J3K7M9              	100.00%		Q293L9              	100.00%
Bootstrap support for J3K7M9 as seed ortholog is 100%.
Bootstrap support for Q293L9 as seed ortholog is 100%.

Group of orthologs #377. Best score 422 bits
Score difference with first non-orthologous sequence - C.immitis:317 D.pseudoobscura:222

J3K250              	100.00%		Q29KV1              	100.00%
Bootstrap support for J3K250 as seed ortholog is 100%.
Bootstrap support for Q29KV1 as seed ortholog is 100%.

Group of orthologs #378. Best score 422 bits
Score difference with first non-orthologous sequence - C.immitis:422 D.pseudoobscura:422

J3KK53              	100.00%		Q29B16              	100.00%
Bootstrap support for J3KK53 as seed ortholog is 100%.
Bootstrap support for Q29B16 as seed ortholog is 100%.

Group of orthologs #379. Best score 421 bits
Score difference with first non-orthologous sequence - C.immitis:421 D.pseudoobscura:200

J3KHG5              	100.00%		I5AMY6              	100.00%
Bootstrap support for J3KHG5 as seed ortholog is 100%.
Bootstrap support for I5AMY6 as seed ortholog is 99%.

Group of orthologs #380. Best score 421 bits
Score difference with first non-orthologous sequence - C.immitis:421 D.pseudoobscura:421

J3KCX9              	100.00%		Q29C43              	100.00%
Bootstrap support for J3KCX9 as seed ortholog is 100%.
Bootstrap support for Q29C43 as seed ortholog is 100%.

Group of orthologs #381. Best score 421 bits
Score difference with first non-orthologous sequence - C.immitis:421 D.pseudoobscura:421

J3K8H1              	100.00%		Q29LZ8              	100.00%
Bootstrap support for J3K8H1 as seed ortholog is 100%.
Bootstrap support for Q29LZ8 as seed ortholog is 100%.

Group of orthologs #382. Best score 420 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:204

Q1E2B2              	100.00%		Q292K7              	100.00%
Bootstrap support for Q1E2B2 as seed ortholog is 100%.
Bootstrap support for Q292K7 as seed ortholog is 99%.

Group of orthologs #383. Best score 419 bits
Score difference with first non-orthologous sequence - C.immitis:419 D.pseudoobscura:419

Q1E5B0              	100.00%		Q291E2              	100.00%
Bootstrap support for Q1E5B0 as seed ortholog is 100%.
Bootstrap support for Q291E2 as seed ortholog is 100%.

Group of orthologs #384. Best score 418 bits
Score difference with first non-orthologous sequence - C.immitis:418 D.pseudoobscura:127

J3KK63              	100.00%		Q2LZK2              	100.00%
                    	       		B5DLC8              	24.37%
Bootstrap support for J3KK63 as seed ortholog is 100%.
Bootstrap support for Q2LZK2 as seed ortholog is 99%.

Group of orthologs #385. Best score 418 bits
Score difference with first non-orthologous sequence - C.immitis:418 D.pseudoobscura:418

J3KED7              	100.00%		Q28XY9              	100.00%
Bootstrap support for J3KED7 as seed ortholog is 100%.
Bootstrap support for Q28XY9 as seed ortholog is 100%.

Group of orthologs #386. Best score 417 bits
Score difference with first non-orthologous sequence - C.immitis:417 D.pseudoobscura:417

J3K7S6              	100.00%		B5DPQ3              	100.00%
                    	       		B5DL62              	7.11%
Bootstrap support for J3K7S6 as seed ortholog is 100%.
Bootstrap support for B5DPQ3 as seed ortholog is 100%.

Group of orthologs #387. Best score 416 bits
Score difference with first non-orthologous sequence - C.immitis:416 D.pseudoobscura:341

J3KIB5              	100.00%		Q29DL4              	100.00%
Bootstrap support for J3KIB5 as seed ortholog is 100%.
Bootstrap support for Q29DL4 as seed ortholog is 100%.

Group of orthologs #388. Best score 414 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:300

J3K1V0              	100.00%		Q28YP2              	100.00%
Bootstrap support for J3K1V0 as seed ortholog is 100%.
Bootstrap support for Q28YP2 as seed ortholog is 100%.

Group of orthologs #389. Best score 413 bits
Score difference with first non-orthologous sequence - C.immitis:413 D.pseudoobscura:413

I9XKE9              	100.00%		Q28YH3              	100.00%
Bootstrap support for I9XKE9 as seed ortholog is 100%.
Bootstrap support for Q28YH3 as seed ortholog is 100%.

Group of orthologs #390. Best score 412 bits
Score difference with first non-orthologous sequence - C.immitis:412 D.pseudoobscura:212

J0HG28              	100.00%		B5E189              	100.00%
Bootstrap support for J0HG28 as seed ortholog is 100%.
Bootstrap support for B5E189 as seed ortholog is 100%.

Group of orthologs #391. Best score 412 bits
Score difference with first non-orthologous sequence - C.immitis:412 D.pseudoobscura:412

Q1DI97              	100.00%		B5E081              	100.00%
Bootstrap support for Q1DI97 as seed ortholog is 100%.
Bootstrap support for B5E081 as seed ortholog is 100%.

Group of orthologs #392. Best score 412 bits
Score difference with first non-orthologous sequence - C.immitis:412 D.pseudoobscura:412

J3KFF1              	100.00%		Q29CF1              	100.00%
Bootstrap support for J3KFF1 as seed ortholog is 100%.
Bootstrap support for Q29CF1 as seed ortholog is 100%.

Group of orthologs #393. Best score 411 bits
Score difference with first non-orthologous sequence - C.immitis:411 D.pseudoobscura:249

J3KAX0              	100.00%		B5DZN8              	100.00%
Bootstrap support for J3KAX0 as seed ortholog is 100%.
Bootstrap support for B5DZN8 as seed ortholog is 100%.

Group of orthologs #394. Best score 410 bits
Score difference with first non-orthologous sequence - C.immitis:410 D.pseudoobscura:410

J3K8L5              	100.00%		B5DP22              	100.00%
Bootstrap support for J3K8L5 as seed ortholog is 100%.
Bootstrap support for B5DP22 as seed ortholog is 100%.

Group of orthologs #395. Best score 410 bits
Score difference with first non-orthologous sequence - C.immitis:410 D.pseudoobscura:410

I9NLC0              	100.00%		Q29HT6              	100.00%
Bootstrap support for I9NLC0 as seed ortholog is 100%.
Bootstrap support for Q29HT6 as seed ortholog is 100%.

Group of orthologs #396. Best score 410 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:66

J3KFP5              	100.00%		Q292K3              	100.00%
Bootstrap support for J3KFP5 as seed ortholog is 99%.
Bootstrap support for Q292K3 as seed ortholog is 95%.

Group of orthologs #397. Best score 409 bits
Score difference with first non-orthologous sequence - C.immitis:294 D.pseudoobscura:278

J3K140              	100.00%		B5DI07              	100.00%
Bootstrap support for J3K140 as seed ortholog is 100%.
Bootstrap support for B5DI07 as seed ortholog is 100%.

Group of orthologs #398. Best score 409 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:141

J3KAG3              	100.00%		Q29G46              	100.00%
Bootstrap support for J3KAG3 as seed ortholog is 92%.
Bootstrap support for Q29G46 as seed ortholog is 99%.

Group of orthologs #399. Best score 409 bits
Score difference with first non-orthologous sequence - C.immitis:409 D.pseudoobscura:409

J3KFM4              	100.00%		Q2LZ76              	100.00%
Bootstrap support for J3KFM4 as seed ortholog is 100%.
Bootstrap support for Q2LZ76 as seed ortholog is 100%.

Group of orthologs #400. Best score 407 bits
Score difference with first non-orthologous sequence - C.immitis:407 D.pseudoobscura:407

J3KH72              	100.00%		B5DUR8              	100.00%
Bootstrap support for J3KH72 as seed ortholog is 100%.
Bootstrap support for B5DUR8 as seed ortholog is 100%.

Group of orthologs #401. Best score 407 bits
Score difference with first non-orthologous sequence - C.immitis:407 D.pseudoobscura:83

J3K0G1              	100.00%		Q29MP1              	100.00%
Bootstrap support for J3K0G1 as seed ortholog is 100%.
Bootstrap support for Q29MP1 as seed ortholog is 93%.

Group of orthologs #402. Best score 406 bits
Score difference with first non-orthologous sequence - C.immitis:360 D.pseudoobscura:307

J3KC10              	100.00%		Q29EQ8              	100.00%
Bootstrap support for J3KC10 as seed ortholog is 100%.
Bootstrap support for Q29EQ8 as seed ortholog is 100%.

Group of orthologs #403. Best score 406 bits
Score difference with first non-orthologous sequence - C.immitis:406 D.pseudoobscura:406

J3K8I5              	100.00%		Q29M02              	100.00%
Bootstrap support for J3K8I5 as seed ortholog is 100%.
Bootstrap support for Q29M02 as seed ortholog is 100%.

Group of orthologs #404. Best score 405 bits
Score difference with first non-orthologous sequence - C.immitis:316 D.pseudoobscura:405

J3K6Z6              	100.00%		B5DJJ9              	100.00%
Bootstrap support for J3K6Z6 as seed ortholog is 100%.
Bootstrap support for B5DJJ9 as seed ortholog is 100%.

Group of orthologs #405. Best score 405 bits
Score difference with first non-orthologous sequence - C.immitis:308 D.pseudoobscura:405

J3KDL2              	100.00%		Q28X05              	100.00%
Bootstrap support for J3KDL2 as seed ortholog is 100%.
Bootstrap support for Q28X05 as seed ortholog is 100%.

Group of orthologs #406. Best score 405 bits
Score difference with first non-orthologous sequence - C.immitis:405 D.pseudoobscura:405

J3KE43              	100.00%		Q29L00              	100.00%
Bootstrap support for J3KE43 as seed ortholog is 100%.
Bootstrap support for Q29L00 as seed ortholog is 100%.

Group of orthologs #407. Best score 404 bits
Score difference with first non-orthologous sequence - C.immitis:306 D.pseudoobscura:192

J3K7T7              	100.00%		Q290C4              	100.00%
Bootstrap support for J3K7T7 as seed ortholog is 100%.
Bootstrap support for Q290C4 as seed ortholog is 100%.

Group of orthologs #408. Best score 403 bits
Score difference with first non-orthologous sequence - C.immitis:403 D.pseudoobscura:403

J3K424              	100.00%		I7KU16              	100.00%
Bootstrap support for J3K424 as seed ortholog is 100%.
Bootstrap support for I7KU16 as seed ortholog is 100%.

Group of orthologs #409. Best score 403 bits
Score difference with first non-orthologous sequence - C.immitis:403 D.pseudoobscura:403

J3K3P5              	100.00%		Q28ZN4              	100.00%
Bootstrap support for J3K3P5 as seed ortholog is 100%.
Bootstrap support for Q28ZN4 as seed ortholog is 100%.

Group of orthologs #410. Best score 403 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:403

J3K2C6              	100.00%		Q29J51              	100.00%
Bootstrap support for J3K2C6 as seed ortholog is 99%.
Bootstrap support for Q29J51 as seed ortholog is 100%.

Group of orthologs #411. Best score 403 bits
Score difference with first non-orthologous sequence - C.immitis:29 D.pseudoobscura:304

J3KKC9              	100.00%		Q28XU5              	100.00%
Bootstrap support for J3KKC9 as seed ortholog is 70%.
Alternative seed ortholog is J3KEL1 (29 bits away from this cluster)
Bootstrap support for Q28XU5 as seed ortholog is 100%.

Group of orthologs #412. Best score 403 bits
Score difference with first non-orthologous sequence - C.immitis:403 D.pseudoobscura:403

J3KJA6              	100.00%		Q29JV2              	100.00%
Bootstrap support for J3KJA6 as seed ortholog is 100%.
Bootstrap support for Q29JV2 as seed ortholog is 100%.

Group of orthologs #413. Best score 402 bits
Score difference with first non-orthologous sequence - C.immitis:402 D.pseudoobscura:402

Q1DX43              	100.00%		Q28Y45              	100.00%
Bootstrap support for Q1DX43 as seed ortholog is 100%.
Bootstrap support for Q28Y45 as seed ortholog is 100%.

Group of orthologs #414. Best score 401 bits
Score difference with first non-orthologous sequence - C.immitis:401 D.pseudoobscura:401

J3KGM2              	100.00%		Q29LI1              	100.00%
Bootstrap support for J3KGM2 as seed ortholog is 100%.
Bootstrap support for Q29LI1 as seed ortholog is 100%.

Group of orthologs #415. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:399 D.pseudoobscura:399

J3KCY2              	100.00%		B5DU58              	100.00%
                    	       		B5DXK5              	100.00%
Bootstrap support for J3KCY2 as seed ortholog is 100%.
Bootstrap support for B5DU58 as seed ortholog is 100%.
Bootstrap support for B5DXK5 as seed ortholog is 100%.

Group of orthologs #416. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:399 D.pseudoobscura:399

Q1E4Z3              	100.00%		B5DY99              	100.00%
                    	       		Q295S1              	43.90%
Bootstrap support for Q1E4Z3 as seed ortholog is 100%.
Bootstrap support for B5DY99 as seed ortholog is 100%.

Group of orthologs #417. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:399 D.pseudoobscura:399

J3KJ93              	100.00%		Q295J7              	100.00%
Bootstrap support for J3KJ93 as seed ortholog is 100%.
Bootstrap support for Q295J7 as seed ortholog is 100%.

Group of orthologs #418. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:27 D.pseudoobscura:145

J3KJK0              	100.00%		Q29D45              	100.00%
Bootstrap support for J3KJK0 as seed ortholog is 83%.
Bootstrap support for Q29D45 as seed ortholog is 100%.

Group of orthologs #419. Best score 398 bits
Score difference with first non-orthologous sequence - C.immitis:398 D.pseudoobscura:398

J3KH31              	100.00%		Q2LYK1              	100.00%
Bootstrap support for J3KH31 as seed ortholog is 100%.
Bootstrap support for Q2LYK1 as seed ortholog is 100%.

Group of orthologs #420. Best score 398 bits
Score difference with first non-orthologous sequence - C.immitis:398 D.pseudoobscura:398

Q1DLJ4              	100.00%		Q29NB4              	100.00%
Bootstrap support for Q1DLJ4 as seed ortholog is 100%.
Bootstrap support for Q29NB4 as seed ortholog is 100%.

Group of orthologs #421. Best score 397 bits
Score difference with first non-orthologous sequence - C.immitis:397 D.pseudoobscura:397

J3K9X0              	100.00%		Q291J6              	100.00%
Bootstrap support for J3K9X0 as seed ortholog is 100%.
Bootstrap support for Q291J6 as seed ortholog is 100%.

Group of orthologs #422. Best score 396 bits
Score difference with first non-orthologous sequence - C.immitis:291 D.pseudoobscura:233

J3K4W1              	100.00%		Q28Y67              	100.00%
Bootstrap support for J3K4W1 as seed ortholog is 100%.
Bootstrap support for Q28Y67 as seed ortholog is 99%.

Group of orthologs #423. Best score 396 bits
Score difference with first non-orthologous sequence - C.immitis:396 D.pseudoobscura:396

J3KBU7              	100.00%		B5E078              	100.00%
Bootstrap support for J3KBU7 as seed ortholog is 100%.
Bootstrap support for B5E078 as seed ortholog is 100%.

Group of orthologs #424. Best score 396 bits
Score difference with first non-orthologous sequence - C.immitis:396 D.pseudoobscura:396

J3K671              	100.00%		Q29AC1              	100.00%
Bootstrap support for J3K671 as seed ortholog is 100%.
Bootstrap support for Q29AC1 as seed ortholog is 100%.

Group of orthologs #425. Best score 396 bits
Score difference with first non-orthologous sequence - C.immitis:396 D.pseudoobscura:396

J3K5C0              	100.00%		Q29BZ6              	100.00%
Bootstrap support for J3K5C0 as seed ortholog is 100%.
Bootstrap support for Q29BZ6 as seed ortholog is 100%.

Group of orthologs #426. Best score 395 bits
Score difference with first non-orthologous sequence - C.immitis:395 D.pseudoobscura:395

J3K4S3              	100.00%		B5DXS3              	100.00%
Bootstrap support for J3K4S3 as seed ortholog is 100%.
Bootstrap support for B5DXS3 as seed ortholog is 100%.

Group of orthologs #427. Best score 395 bits
Score difference with first non-orthologous sequence - C.immitis:395 D.pseudoobscura:395

J3K0Q0              	100.00%		Q29FD8              	100.00%
Bootstrap support for J3K0Q0 as seed ortholog is 100%.
Bootstrap support for Q29FD8 as seed ortholog is 100%.

Group of orthologs #428. Best score 394 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:313

J3K1W4              	100.00%		Q29C69              	100.00%
Bootstrap support for J3K1W4 as seed ortholog is 99%.
Bootstrap support for Q29C69 as seed ortholog is 100%.

Group of orthologs #429. Best score 394 bits
Score difference with first non-orthologous sequence - C.immitis:394 D.pseudoobscura:394

J3KBQ3              	100.00%		Q29NI5              	100.00%
Bootstrap support for J3KBQ3 as seed ortholog is 100%.
Bootstrap support for Q29NI5 as seed ortholog is 100%.

Group of orthologs #430. Best score 394 bits
Score difference with first non-orthologous sequence - C.immitis:150 D.pseudoobscura:45

J3KJU5              	100.00%		Q2LZZ7              	100.00%
Bootstrap support for J3KJU5 as seed ortholog is 99%.
Bootstrap support for Q2LZZ7 as seed ortholog is 92%.

Group of orthologs #431. Best score 393 bits
Score difference with first non-orthologous sequence - C.immitis:393 D.pseudoobscura:393

J3KGX8              	100.00%		Q2M038              	100.00%
Bootstrap support for J3KGX8 as seed ortholog is 100%.
Bootstrap support for Q2M038 as seed ortholog is 100%.

Group of orthologs #432. Best score 390 bits
Score difference with first non-orthologous sequence - C.immitis:390 D.pseudoobscura:390

J3K2N0              	100.00%		Q29CF0              	100.00%
Bootstrap support for J3K2N0 as seed ortholog is 100%.
Bootstrap support for Q29CF0 as seed ortholog is 100%.

Group of orthologs #433. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:389

I9NRZ2              	100.00%		Q29IW2              	100.00%
Bootstrap support for I9NRZ2 as seed ortholog is 99%.
Bootstrap support for Q29IW2 as seed ortholog is 100%.

Group of orthologs #434. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 D.pseudoobscura:389

J3KBV6              	100.00%		Q29CH3              	100.00%
Bootstrap support for J3KBV6 as seed ortholog is 100%.
Bootstrap support for Q29CH3 as seed ortholog is 100%.

Group of orthologs #435. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 D.pseudoobscura:389

J3K4S2              	100.00%		Q29PE0              	100.00%
Bootstrap support for J3K4S2 as seed ortholog is 100%.
Bootstrap support for Q29PE0 as seed ortholog is 100%.

Group of orthologs #436. Best score 388 bits
Score difference with first non-orthologous sequence - C.immitis:388 D.pseudoobscura:388

J3K6P1              	100.00%		Q291F3              	100.00%
                    	       		Q28ZB9              	32.03%
Bootstrap support for J3K6P1 as seed ortholog is 100%.
Bootstrap support for Q291F3 as seed ortholog is 100%.

Group of orthologs #437. Best score 388 bits
Score difference with first non-orthologous sequence - C.immitis:388 D.pseudoobscura:332

I9NSN2              	100.00%		Q29FX8              	100.00%
Bootstrap support for I9NSN2 as seed ortholog is 100%.
Bootstrap support for Q29FX8 as seed ortholog is 100%.

Group of orthologs #438. Best score 388 bits
Score difference with first non-orthologous sequence - C.immitis:388 D.pseudoobscura:90

J3KA06              	100.00%		Q29H82              	100.00%
Bootstrap support for J3KA06 as seed ortholog is 100%.
Bootstrap support for Q29H82 as seed ortholog is 92%.

Group of orthologs #439. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 D.pseudoobscura:386

J3KJ17              	100.00%		B5DLB2              	100.00%
Bootstrap support for J3KJ17 as seed ortholog is 100%.
Bootstrap support for B5DLB2 as seed ortholog is 100%.

Group of orthologs #440. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 D.pseudoobscura:386

J3KHV3              	100.00%		B5DXU6              	100.00%
Bootstrap support for J3KHV3 as seed ortholog is 100%.
Bootstrap support for B5DXU6 as seed ortholog is 100%.

Group of orthologs #441. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:243 D.pseudoobscura:233

Q1DWF4              	100.00%		Q29JE7              	100.00%
Bootstrap support for Q1DWF4 as seed ortholog is 100%.
Bootstrap support for Q29JE7 as seed ortholog is 100%.

Group of orthologs #442. Best score 385 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:81

J3K9Q1              	100.00%		Q28XI2              	100.00%
                    	       		Q29F33              	20.61%
Bootstrap support for J3K9Q1 as seed ortholog is 98%.
Bootstrap support for Q28XI2 as seed ortholog is 97%.

Group of orthologs #443. Best score 384 bits
Score difference with first non-orthologous sequence - C.immitis:384 D.pseudoobscura:384

I9XLL8              	100.00%		Q29K24              	100.00%
Bootstrap support for I9XLL8 as seed ortholog is 100%.
Bootstrap support for Q29K24 as seed ortholog is 100%.

Group of orthologs #444. Best score 384 bits
Score difference with first non-orthologous sequence - C.immitis:384 D.pseudoobscura:384

J3K6C6              	100.00%		Q29EY4              	100.00%
Bootstrap support for J3K6C6 as seed ortholog is 100%.
Bootstrap support for Q29EY4 as seed ortholog is 100%.

Group of orthologs #445. Best score 384 bits
Score difference with first non-orthologous sequence - C.immitis:384 D.pseudoobscura:384

J3KM61              	100.00%		Q29D84              	100.00%
Bootstrap support for J3KM61 as seed ortholog is 100%.
Bootstrap support for Q29D84 as seed ortholog is 100%.

Group of orthologs #446. Best score 382 bits
Score difference with first non-orthologous sequence - C.immitis:382 D.pseudoobscura:382

I9NSG7              	100.00%		B5DP06              	100.00%
Bootstrap support for I9NSG7 as seed ortholog is 100%.
Bootstrap support for B5DP06 as seed ortholog is 100%.

Group of orthologs #447. Best score 382 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:140

J0HHX9              	100.00%		Q297G9              	100.00%
Bootstrap support for J0HHX9 as seed ortholog is 99%.
Bootstrap support for Q297G9 as seed ortholog is 99%.

Group of orthologs #448. Best score 382 bits
Score difference with first non-orthologous sequence - C.immitis:382 D.pseudoobscura:382

J3KBB1              	100.00%		Q28ZB7              	100.00%
Bootstrap support for J3KBB1 as seed ortholog is 100%.
Bootstrap support for Q28ZB7 as seed ortholog is 100%.

Group of orthologs #449. Best score 382 bits
Score difference with first non-orthologous sequence - C.immitis:382 D.pseudoobscura:382

J3KBF0              	100.00%		Q29I46              	100.00%
Bootstrap support for J3KBF0 as seed ortholog is 100%.
Bootstrap support for Q29I46 as seed ortholog is 100%.

Group of orthologs #450. Best score 381 bits
Score difference with first non-orthologous sequence - C.immitis:381 D.pseudoobscura:381

J3KHS8              	100.00%		Q29I48              	100.00%
                    	       		B5DJ87              	12.15%
Bootstrap support for J3KHS8 as seed ortholog is 100%.
Bootstrap support for Q29I48 as seed ortholog is 100%.

Group of orthologs #451. Best score 381 bits
Score difference with first non-orthologous sequence - C.immitis:381 D.pseudoobscura:381

Q1DVD1              	100.00%		B5DI51              	100.00%
Bootstrap support for Q1DVD1 as seed ortholog is 100%.
Bootstrap support for B5DI51 as seed ortholog is 100%.

Group of orthologs #452. Best score 381 bits
Score difference with first non-orthologous sequence - C.immitis:271 D.pseudoobscura:381

J3KJH3              	100.00%		Q290S2              	100.00%
Bootstrap support for J3KJH3 as seed ortholog is 100%.
Bootstrap support for Q290S2 as seed ortholog is 100%.

Group of orthologs #453. Best score 380 bits
Score difference with first non-orthologous sequence - C.immitis:380 D.pseudoobscura:380

I9XM32              	100.00%		Q29FW1              	100.00%
Bootstrap support for I9XM32 as seed ortholog is 100%.
Bootstrap support for Q29FW1 as seed ortholog is 100%.

Group of orthologs #454. Best score 380 bits
Score difference with first non-orthologous sequence - C.immitis:380 D.pseudoobscura:380

J3K0W8              	100.00%		Q29M26              	100.00%
Bootstrap support for J3K0W8 as seed ortholog is 100%.
Bootstrap support for Q29M26 as seed ortholog is 100%.

Group of orthologs #455. Best score 377 bits
Score difference with first non-orthologous sequence - C.immitis:278 D.pseudoobscura:377

J3K3P9              	100.00%		Q29E26              	100.00%
Bootstrap support for J3K3P9 as seed ortholog is 100%.
Bootstrap support for Q29E26 as seed ortholog is 100%.

Group of orthologs #456. Best score 377 bits
Score difference with first non-orthologous sequence - C.immitis:216 D.pseudoobscura:229

Q1E1R7              	100.00%		Q298Q2              	100.00%
Bootstrap support for Q1E1R7 as seed ortholog is 99%.
Bootstrap support for Q298Q2 as seed ortholog is 99%.

Group of orthologs #457. Best score 377 bits
Score difference with first non-orthologous sequence - C.immitis:377 D.pseudoobscura:377

J3KMA8              	100.00%		Q29FT4              	100.00%
Bootstrap support for J3KMA8 as seed ortholog is 100%.
Bootstrap support for Q29FT4 as seed ortholog is 100%.

Group of orthologs #458. Best score 376 bits
Score difference with first non-orthologous sequence - C.immitis:376 D.pseudoobscura:376

J3K3T0              	100.00%		Q292C8              	100.00%
Bootstrap support for J3K3T0 as seed ortholog is 100%.
Bootstrap support for Q292C8 as seed ortholog is 100%.

Group of orthologs #459. Best score 376 bits
Score difference with first non-orthologous sequence - C.immitis:376 D.pseudoobscura:376

Q1DJR8              	100.00%		Q29IL4              	100.00%
Bootstrap support for Q1DJR8 as seed ortholog is 100%.
Bootstrap support for Q29IL4 as seed ortholog is 100%.

Group of orthologs #460. Best score 375 bits
Score difference with first non-orthologous sequence - C.immitis:172 D.pseudoobscura:228

J0HEE4              	100.00%		I5ANS5              	100.00%
J3KAU2              	31.98%		B5DLK6              	57.66%
J3KGC8              	27.50%		Q28ZL5              	7.16%
Bootstrap support for J0HEE4 as seed ortholog is 99%.
Bootstrap support for I5ANS5 as seed ortholog is 99%.

Group of orthologs #461. Best score 375 bits
Score difference with first non-orthologous sequence - C.immitis:375 D.pseudoobscura:375

J3K3A0              	100.00%		Q296C9              	100.00%
Bootstrap support for J3K3A0 as seed ortholog is 100%.
Bootstrap support for Q296C9 as seed ortholog is 100%.

Group of orthologs #462. Best score 374 bits
Score difference with first non-orthologous sequence - C.immitis:374 D.pseudoobscura:374

J3KH55              	100.00%		Q29PI4              	100.00%
Bootstrap support for J3KH55 as seed ortholog is 100%.
Bootstrap support for Q29PI4 as seed ortholog is 100%.

Group of orthologs #463. Best score 373 bits
Score difference with first non-orthologous sequence - C.immitis:373 D.pseudoobscura:373

I9NPB7              	100.00%		Q295H7              	100.00%
Bootstrap support for I9NPB7 as seed ortholog is 100%.
Bootstrap support for Q295H7 as seed ortholog is 100%.

Group of orthologs #464. Best score 373 bits
Score difference with first non-orthologous sequence - C.immitis:373 D.pseudoobscura:303

J3KM53              	100.00%		Q28XJ0              	100.00%
Bootstrap support for J3KM53 as seed ortholog is 100%.
Bootstrap support for Q28XJ0 as seed ortholog is 100%.

Group of orthologs #465. Best score 373 bits
Score difference with first non-orthologous sequence - C.immitis:373 D.pseudoobscura:373

J3KJ56              	100.00%		Q2LZW6              	100.00%
Bootstrap support for J3KJ56 as seed ortholog is 100%.
Bootstrap support for Q2LZW6 as seed ortholog is 100%.

Group of orthologs #466. Best score 372 bits
Score difference with first non-orthologous sequence - C.immitis:372 D.pseudoobscura:372

J3K745              	100.00%		Q298Y4              	100.00%
Bootstrap support for J3K745 as seed ortholog is 100%.
Bootstrap support for Q298Y4 as seed ortholog is 100%.

Group of orthologs #467. Best score 371 bits
Score difference with first non-orthologous sequence - C.immitis:371 D.pseudoobscura:290

J3KBU6              	100.00%		Q2M1B5              	100.00%
Bootstrap support for J3KBU6 as seed ortholog is 100%.
Bootstrap support for Q2M1B5 as seed ortholog is 100%.

Group of orthologs #468. Best score 368 bits
Score difference with first non-orthologous sequence - C.immitis:259 D.pseudoobscura:210

J3K8F0              	100.00%		Q2M0E3              	100.00%
Bootstrap support for J3K8F0 as seed ortholog is 100%.
Bootstrap support for Q2M0E3 as seed ortholog is 99%.

Group of orthologs #469. Best score 367 bits
Score difference with first non-orthologous sequence - C.immitis:43 D.pseudoobscura:171

Q1DUU8              	100.00%		Q29K65              	100.00%
                    	       		B5DIM1              	82.84%
                    	       		Q298J6              	61.39%
                    	       		B5DVL2              	17.16%
Bootstrap support for Q1DUU8 as seed ortholog is 89%.
Bootstrap support for Q29K65 as seed ortholog is 100%.

Group of orthologs #470. Best score 367 bits
Score difference with first non-orthologous sequence - C.immitis:367 D.pseudoobscura:367

J3K764              	100.00%		Q292X9              	100.00%
                    	       		Q29GD5              	8.43%
Bootstrap support for J3K764 as seed ortholog is 100%.
Bootstrap support for Q292X9 as seed ortholog is 100%.

Group of orthologs #471. Best score 367 bits
Score difference with first non-orthologous sequence - C.immitis:367 D.pseudoobscura:367

I9NQ56              	100.00%		Q29FA8              	100.00%
Bootstrap support for I9NQ56 as seed ortholog is 100%.
Bootstrap support for Q29FA8 as seed ortholog is 100%.

Group of orthologs #472. Best score 367 bits
Score difference with first non-orthologous sequence - C.immitis:367 D.pseudoobscura:367

Q1DP77              	100.00%		Q28Z41              	100.00%
Bootstrap support for Q1DP77 as seed ortholog is 100%.
Bootstrap support for Q28Z41 as seed ortholog is 100%.

Group of orthologs #473. Best score 366 bits
Score difference with first non-orthologous sequence - C.immitis:322 D.pseudoobscura:52

J3KD29              	100.00%		Q295U8              	100.00%
Bootstrap support for J3KD29 as seed ortholog is 100%.
Bootstrap support for Q295U8 as seed ortholog is 95%.

Group of orthologs #474. Best score 366 bits
Score difference with first non-orthologous sequence - C.immitis:366 D.pseudoobscura:366

J3KBA9              	100.00%		Q29ER8              	100.00%
Bootstrap support for J3KBA9 as seed ortholog is 100%.
Bootstrap support for Q29ER8 as seed ortholog is 100%.

Group of orthologs #475. Best score 364 bits
Score difference with first non-orthologous sequence - C.immitis:166 D.pseudoobscura:364

J3KI90              	100.00%		Q29FV1              	100.00%
J3K712              	5.90%		
Bootstrap support for J3KI90 as seed ortholog is 99%.
Bootstrap support for Q29FV1 as seed ortholog is 100%.

Group of orthologs #476. Best score 364 bits
Score difference with first non-orthologous sequence - C.immitis:364 D.pseudoobscura:364

J3K2X2              	100.00%		Q291S0              	100.00%
Bootstrap support for J3K2X2 as seed ortholog is 100%.
Bootstrap support for Q291S0 as seed ortholog is 100%.

Group of orthologs #477. Best score 363 bits
Score difference with first non-orthologous sequence - C.immitis:363 D.pseudoobscura:363

J3KLS7              	100.00%		Q29IF6              	100.00%
                    	       		Q29IF7              	9.85%
Bootstrap support for J3KLS7 as seed ortholog is 100%.
Bootstrap support for Q29IF6 as seed ortholog is 100%.

Group of orthologs #478. Best score 363 bits
Score difference with first non-orthologous sequence - C.immitis:363 D.pseudoobscura:363

J3K0C3              	100.00%		B5DNL3              	100.00%
Bootstrap support for J3K0C3 as seed ortholog is 100%.
Bootstrap support for B5DNL3 as seed ortholog is 100%.

Group of orthologs #479. Best score 363 bits
Score difference with first non-orthologous sequence - C.immitis:363 D.pseudoobscura:363

I9NL99              	100.00%		Q29EI3              	100.00%
Bootstrap support for I9NL99 as seed ortholog is 100%.
Bootstrap support for Q29EI3 as seed ortholog is 100%.

Group of orthologs #480. Best score 363 bits
Score difference with first non-orthologous sequence - C.immitis:363 D.pseudoobscura:363

J3KBK3              	100.00%		Q296T3              	100.00%
Bootstrap support for J3KBK3 as seed ortholog is 100%.
Bootstrap support for Q296T3 as seed ortholog is 100%.

Group of orthologs #481. Best score 363 bits
Score difference with first non-orthologous sequence - C.immitis:363 D.pseudoobscura:363

J3KAP7              	100.00%		Q2LZX2              	100.00%
Bootstrap support for J3KAP7 as seed ortholog is 100%.
Bootstrap support for Q2LZX2 as seed ortholog is 100%.

Group of orthologs #482. Best score 363 bits
Score difference with first non-orthologous sequence - C.immitis:363 D.pseudoobscura:363

J3KFJ7              	100.00%		Q2LYP0              	100.00%
Bootstrap support for J3KFJ7 as seed ortholog is 100%.
Bootstrap support for Q2LYP0 as seed ortholog is 100%.

Group of orthologs #483. Best score 361 bits
Score difference with first non-orthologous sequence - C.immitis:361 D.pseudoobscura:52

J3KE53              	100.00%		Q296W0              	100.00%
Bootstrap support for J3KE53 as seed ortholog is 100%.
Bootstrap support for Q296W0 as seed ortholog is 97%.

Group of orthologs #484. Best score 360 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:242

J3K8Q0              	100.00%		Q29B91              	100.00%
Bootstrap support for J3K8Q0 as seed ortholog is 100%.
Bootstrap support for Q29B91 as seed ortholog is 100%.

Group of orthologs #485. Best score 360 bits
Score difference with first non-orthologous sequence - C.immitis:360 D.pseudoobscura:360

J3K5S6              	100.00%		Q29L48              	100.00%
Bootstrap support for J3K5S6 as seed ortholog is 100%.
Bootstrap support for Q29L48 as seed ortholog is 100%.

Group of orthologs #486. Best score 359 bits
Score difference with first non-orthologous sequence - C.immitis:359 D.pseudoobscura:359

J3KDB9              	100.00%		Q296K7              	100.00%
Bootstrap support for J3KDB9 as seed ortholog is 100%.
Bootstrap support for Q296K7 as seed ortholog is 100%.

Group of orthologs #487. Best score 359 bits
Score difference with first non-orthologous sequence - C.immitis:359 D.pseudoobscura:359

J3KG27              	100.00%		Q299R6              	100.00%
Bootstrap support for J3KG27 as seed ortholog is 100%.
Bootstrap support for Q299R6 as seed ortholog is 100%.

Group of orthologs #488. Best score 359 bits
Score difference with first non-orthologous sequence - C.immitis:359 D.pseudoobscura:359

J3K5Q8              	100.00%		Q29M77              	100.00%
Bootstrap support for J3K5Q8 as seed ortholog is 100%.
Bootstrap support for Q29M77 as seed ortholog is 100%.

Group of orthologs #489. Best score 358 bits
Score difference with first non-orthologous sequence - C.immitis:358 D.pseudoobscura:358

J3K1L3              	100.00%		Q29FJ0              	100.00%
Bootstrap support for J3K1L3 as seed ortholog is 100%.
Bootstrap support for Q29FJ0 as seed ortholog is 100%.

Group of orthologs #490. Best score 357 bits
Score difference with first non-orthologous sequence - C.immitis:357 D.pseudoobscura:357

J3K656              	100.00%		Q29CL0              	100.00%
                    	       		Q290I6              	25.74%
                    	       		Q292Z5              	23.62%
                    	       		Q29K30              	15.56%
                    	       		Q292Z7              	11.32%
Bootstrap support for J3K656 as seed ortholog is 100%.
Bootstrap support for Q29CL0 as seed ortholog is 100%.

Group of orthologs #491. Best score 357 bits
Score difference with first non-orthologous sequence - C.immitis:357 D.pseudoobscura:357

J3KIS7              	100.00%		B5DSC2              	100.00%
Bootstrap support for J3KIS7 as seed ortholog is 100%.
Bootstrap support for B5DSC2 as seed ortholog is 100%.

Group of orthologs #492. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:356 D.pseudoobscura:356

I9NQ79              	100.00%		I7LZD1              	100.00%
Bootstrap support for I9NQ79 as seed ortholog is 100%.
Bootstrap support for I7LZD1 as seed ortholog is 100%.

Group of orthologs #493. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:356 D.pseudoobscura:356

J3KHR8              	100.00%		B5DL48              	100.00%
Bootstrap support for J3KHR8 as seed ortholog is 100%.
Bootstrap support for B5DL48 as seed ortholog is 100%.

Group of orthologs #494. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:356 D.pseudoobscura:250

J3KIY7              	100.00%		B5DPP1              	100.00%
Bootstrap support for J3KIY7 as seed ortholog is 100%.
Bootstrap support for B5DPP1 as seed ortholog is 100%.

Group of orthologs #495. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:356 D.pseudoobscura:356

J3K822              	100.00%		Q299Z8              	100.00%
Bootstrap support for J3K822 as seed ortholog is 100%.
Bootstrap support for Q299Z8 as seed ortholog is 100%.

Group of orthologs #496. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:81

J0HGQ5              	100.00%		Q29NB1              	100.00%
Bootstrap support for J0HGQ5 as seed ortholog is 92%.
Bootstrap support for Q29NB1 as seed ortholog is 99%.

Group of orthologs #497. Best score 355 bits
Score difference with first non-orthologous sequence - C.immitis:355 D.pseudoobscura:355

J3KLY9              	100.00%		Q28WV0              	100.00%
Bootstrap support for J3KLY9 as seed ortholog is 100%.
Bootstrap support for Q28WV0 as seed ortholog is 100%.

Group of orthologs #498. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:354

J3KL66              	100.00%		Q2LZ62              	100.00%
J3KH14              	5.42%		
Bootstrap support for J3KL66 as seed ortholog is 100%.
Bootstrap support for Q2LZ62 as seed ortholog is 100%.

Group of orthologs #499. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:354

J3K867              	100.00%		I5APZ0              	100.00%
Bootstrap support for J3K867 as seed ortholog is 100%.
Bootstrap support for I5APZ0 as seed ortholog is 100%.

Group of orthologs #500. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:36

J3KCR5              	100.00%		Q28ZJ4              	100.00%
Bootstrap support for J3KCR5 as seed ortholog is 100%.
Bootstrap support for Q28ZJ4 as seed ortholog is 62%.
Alternative seed ortholog is Q29PM8 (36 bits away from this cluster)

Group of orthologs #501. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:354

Q1E167              	100.00%		Q28YJ2              	100.00%
Bootstrap support for Q1E167 as seed ortholog is 100%.
Bootstrap support for Q28YJ2 as seed ortholog is 100%.

Group of orthologs #502. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:196 D.pseudoobscura:354

J3K6Y9              	100.00%		Q29IZ7              	100.00%
Bootstrap support for J3K6Y9 as seed ortholog is 100%.
Bootstrap support for Q29IZ7 as seed ortholog is 100%.

Group of orthologs #503. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:116

J3KBT9              	100.00%		Q29G85              	100.00%
Bootstrap support for J3KBT9 as seed ortholog is 100%.
Bootstrap support for Q29G85 as seed ortholog is 99%.

Group of orthologs #504. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 D.pseudoobscura:354

J3KLX8              	100.00%		Q29JW9              	100.00%
Bootstrap support for J3KLX8 as seed ortholog is 100%.
Bootstrap support for Q29JW9 as seed ortholog is 100%.

Group of orthologs #505. Best score 353 bits
Score difference with first non-orthologous sequence - C.immitis:353 D.pseudoobscura:252

J3K3E2              	100.00%		Q29AN9              	100.00%
Bootstrap support for J3K3E2 as seed ortholog is 100%.
Bootstrap support for Q29AN9 as seed ortholog is 99%.

Group of orthologs #506. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 D.pseudoobscura:139

J3K984              	100.00%		Q29I60              	100.00%
                    	       		B5DPN7              	31.80%
                    	       		B5DY81              	18.91%
                    	       		B5DK87              	16.86%
                    	       		Q29I59              	7.68%
Bootstrap support for J3K984 as seed ortholog is 100%.
Bootstrap support for Q29I60 as seed ortholog is 92%.

Group of orthologs #507. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 D.pseudoobscura:352

J3K5D9              	100.00%		B5DHP0              	100.00%
Bootstrap support for J3K5D9 as seed ortholog is 100%.
Bootstrap support for B5DHP0 as seed ortholog is 100%.

Group of orthologs #508. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 D.pseudoobscura:352

J3KF33              	100.00%		Q28ZC1              	100.00%
Bootstrap support for J3KF33 as seed ortholog is 100%.
Bootstrap support for Q28ZC1 as seed ortholog is 100%.

Group of orthologs #509. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 D.pseudoobscura:352

J3K8X1              	100.00%		Q29AF5              	100.00%
Bootstrap support for J3K8X1 as seed ortholog is 100%.
Bootstrap support for Q29AF5 as seed ortholog is 100%.

Group of orthologs #510. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 D.pseudoobscura:303

J3KJX0              	100.00%		Q29JJ9              	100.00%
Bootstrap support for J3KJX0 as seed ortholog is 100%.
Bootstrap support for Q29JJ9 as seed ortholog is 100%.

Group of orthologs #511. Best score 351 bits
Score difference with first non-orthologous sequence - C.immitis:351 D.pseudoobscura:351

J3KFR6              	100.00%		Q28XD0              	100.00%
Bootstrap support for J3KFR6 as seed ortholog is 100%.
Bootstrap support for Q28XD0 as seed ortholog is 100%.

Group of orthologs #512. Best score 350 bits
Score difference with first non-orthologous sequence - C.immitis:350 D.pseudoobscura:350

J3K9D0              	100.00%		B5DZ19              	100.00%
Bootstrap support for J3K9D0 as seed ortholog is 100%.
Bootstrap support for B5DZ19 as seed ortholog is 100%.

Group of orthologs #513. Best score 350 bits
Score difference with first non-orthologous sequence - C.immitis:289 D.pseudoobscura:248

J3KK18              	100.00%		Q291L9              	100.00%
Bootstrap support for J3KK18 as seed ortholog is 100%.
Bootstrap support for Q291L9 as seed ortholog is 100%.

Group of orthologs #514. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:283 D.pseudoobscura:172

I9XM29              	100.00%		Q29HL0              	100.00%
Bootstrap support for I9XM29 as seed ortholog is 100%.
Bootstrap support for Q29HL0 as seed ortholog is 100%.

Group of orthologs #515. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:349 D.pseudoobscura:349

J3KHH7              	100.00%		Q299W8              	100.00%
Bootstrap support for J3KHH7 as seed ortholog is 100%.
Bootstrap support for Q299W8 as seed ortholog is 100%.

Group of orthologs #516. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:349 D.pseudoobscura:194

J3KA84              	100.00%		Q29IU6              	100.00%
Bootstrap support for J3KA84 as seed ortholog is 100%.
Bootstrap support for Q29IU6 as seed ortholog is 100%.

Group of orthologs #517. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:83

Q1EAU8              	100.00%		Q29MT7              	100.00%
Bootstrap support for Q1EAU8 as seed ortholog is 99%.
Bootstrap support for Q29MT7 as seed ortholog is 99%.

Group of orthologs #518. Best score 348 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:39

J3K2N2              	100.00%		Q290U3              	100.00%
J3KEK2              	38.19%		
Bootstrap support for J3K2N2 as seed ortholog is 100%.
Bootstrap support for Q290U3 as seed ortholog is 88%.

Group of orthologs #519. Best score 347 bits
Score difference with first non-orthologous sequence - C.immitis:347 D.pseudoobscura:347

J3K7V7              	100.00%		Q29BD5              	100.00%
Bootstrap support for J3K7V7 as seed ortholog is 100%.
Bootstrap support for Q29BD5 as seed ortholog is 100%.

Group of orthologs #520. Best score 347 bits
Score difference with first non-orthologous sequence - C.immitis:347 D.pseudoobscura:347

J3KAS8              	100.00%		Q29HG5              	100.00%
Bootstrap support for J3KAS8 as seed ortholog is 100%.
Bootstrap support for Q29HG5 as seed ortholog is 100%.

Group of orthologs #521. Best score 347 bits
Score difference with first non-orthologous sequence - C.immitis:347 D.pseudoobscura:347

J3KJ00              	100.00%		Q298L5              	100.00%
Bootstrap support for J3KJ00 as seed ortholog is 100%.
Bootstrap support for Q298L5 as seed ortholog is 100%.

Group of orthologs #522. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:346 D.pseudoobscura:346

I9NTL3              	100.00%		Q298Q4              	100.00%
Bootstrap support for I9NTL3 as seed ortholog is 100%.
Bootstrap support for Q298Q4 as seed ortholog is 100%.

Group of orthologs #523. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:346 D.pseudoobscura:346

J3K415              	100.00%		Q29BB3              	100.00%
Bootstrap support for J3K415 as seed ortholog is 100%.
Bootstrap support for Q29BB3 as seed ortholog is 100%.

Group of orthologs #524. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:222 D.pseudoobscura:245

J3K4R2              	100.00%		Q29N00              	100.00%
Bootstrap support for J3K4R2 as seed ortholog is 100%.
Bootstrap support for Q29N00 as seed ortholog is 100%.

Group of orthologs #525. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:346 D.pseudoobscura:346

J3KEY2              	100.00%		Q29LJ0              	100.00%
Bootstrap support for J3KEY2 as seed ortholog is 100%.
Bootstrap support for Q29LJ0 as seed ortholog is 100%.

Group of orthologs #526. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:346 D.pseudoobscura:143

J3KFT1              	100.00%		Q2LZ70              	100.00%
Bootstrap support for J3KFT1 as seed ortholog is 100%.
Bootstrap support for Q2LZ70 as seed ortholog is 99%.

Group of orthologs #527. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:345 D.pseudoobscura:345

I9NM18              	100.00%		Q297V9              	100.00%
Bootstrap support for I9NM18 as seed ortholog is 100%.
Bootstrap support for Q297V9 as seed ortholog is 100%.

Group of orthologs #528. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:345 D.pseudoobscura:345

J3K1P0              	100.00%		Q292S1              	100.00%
Bootstrap support for J3K1P0 as seed ortholog is 100%.
Bootstrap support for Q292S1 as seed ortholog is 100%.

Group of orthologs #529. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:345 D.pseudoobscura:345

J3K091              	100.00%		Q29IU4              	100.00%
Bootstrap support for J3K091 as seed ortholog is 100%.
Bootstrap support for Q29IU4 as seed ortholog is 100%.

Group of orthologs #530. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:345

J3KI45              	100.00%		Q29LX1              	100.00%
Bootstrap support for J3KI45 as seed ortholog is 82%.
Bootstrap support for Q29LX1 as seed ortholog is 100%.

Group of orthologs #531. Best score 343 bits
Score difference with first non-orthologous sequence - C.immitis:343 D.pseudoobscura:106

J3K6B1              	100.00%		Q29L75              	100.00%
Bootstrap support for J3K6B1 as seed ortholog is 100%.
Bootstrap support for Q29L75 as seed ortholog is 98%.

Group of orthologs #532. Best score 341 bits
Score difference with first non-orthologous sequence - C.immitis:341 D.pseudoobscura:269

J3KIB9              	100.00%		Q298Z5              	100.00%
Bootstrap support for J3KIB9 as seed ortholog is 100%.
Bootstrap support for Q298Z5 as seed ortholog is 100%.

Group of orthologs #533. Best score 340 bits
Score difference with first non-orthologous sequence - C.immitis:340 D.pseudoobscura:340

J3K1L1              	100.00%		Q29EV1              	100.00%
Bootstrap support for J3K1L1 as seed ortholog is 100%.
Bootstrap support for Q29EV1 as seed ortholog is 100%.

Group of orthologs #534. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 D.pseudoobscura:339

J3K5I5              	100.00%		Q29ND6              	100.00%
                    	       		B5DKQ5              	95.07%
                    	       		B5DKQ3              	76.85%
                    	       		B5DSM5              	30.05%
Bootstrap support for J3K5I5 as seed ortholog is 100%.
Bootstrap support for Q29ND6 as seed ortholog is 100%.

Group of orthologs #535. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 D.pseudoobscura:295

J3K6J5              	100.00%		Q293U0              	100.00%
                    	       		B5E0L9              	8.97%
Bootstrap support for J3K6J5 as seed ortholog is 100%.
Bootstrap support for Q293U0 as seed ortholog is 100%.

Group of orthologs #536. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 D.pseudoobscura:339

J3KL17              	100.00%		B5DX95              	100.00%
Bootstrap support for J3KL17 as seed ortholog is 100%.
Bootstrap support for B5DX95 as seed ortholog is 100%.

Group of orthologs #537. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 D.pseudoobscura:90

I9NPB4              	100.00%		Q29NP2              	100.00%
Bootstrap support for I9NPB4 as seed ortholog is 100%.
Bootstrap support for Q29NP2 as seed ortholog is 96%.

Group of orthologs #538. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 D.pseudoobscura:339

J3K680              	100.00%		Q29MS6              	100.00%
Bootstrap support for J3K680 as seed ortholog is 100%.
Bootstrap support for Q29MS6 as seed ortholog is 100%.

Group of orthologs #539. Best score 338 bits
Score difference with first non-orthologous sequence - C.immitis:338 D.pseudoobscura:338

J3KBC4              	100.00%		Q29J95              	100.00%
Bootstrap support for J3KBC4 as seed ortholog is 100%.
Bootstrap support for Q29J95 as seed ortholog is 100%.

Group of orthologs #540. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:337 D.pseudoobscura:337

Q1DY54              	100.00%		Q296G8              	100.00%
Bootstrap support for Q1DY54 as seed ortholog is 100%.
Bootstrap support for Q296G8 as seed ortholog is 100%.

Group of orthologs #541. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:337 D.pseudoobscura:337

Q1DZB0              	100.00%		Q2M0S3              	100.00%
Bootstrap support for Q1DZB0 as seed ortholog is 100%.
Bootstrap support for Q2M0S3 as seed ortholog is 100%.

Group of orthologs #542. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:197 D.pseudoobscura:48

J3KC79              	100.00%		Q292G7              	100.00%
                    	       		Q291K6              	28.98%
Bootstrap support for J3KC79 as seed ortholog is 100%.
Bootstrap support for Q292G7 as seed ortholog is 88%.

Group of orthologs #543. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 D.pseudoobscura:336

J3K484              	100.00%		Q29KG2              	100.00%
Bootstrap support for J3K484 as seed ortholog is 100%.
Bootstrap support for Q29KG2 as seed ortholog is 100%.

Group of orthologs #544. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:223 D.pseudoobscura:336

J3KDG0              	100.00%		Q29IR8              	100.00%
Bootstrap support for J3KDG0 as seed ortholog is 100%.
Bootstrap support for Q29IR8 as seed ortholog is 100%.

Group of orthologs #545. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 D.pseudoobscura:86

J3KD49              	100.00%		Q29L61              	100.00%
Bootstrap support for J3KD49 as seed ortholog is 100%.
Bootstrap support for Q29L61 as seed ortholog is 93%.

Group of orthologs #546. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 D.pseudoobscura:336

Q1E2F4              	100.00%		Q29K05              	100.00%
Bootstrap support for Q1E2F4 as seed ortholog is 100%.
Bootstrap support for Q29K05 as seed ortholog is 100%.

Group of orthologs #547. Best score 335 bits
Score difference with first non-orthologous sequence - C.immitis:335 D.pseudoobscura:335

J3KJM1              	100.00%		Q299C1              	100.00%
Bootstrap support for J3KJM1 as seed ortholog is 100%.
Bootstrap support for Q299C1 as seed ortholog is 100%.

Group of orthologs #548. Best score 334 bits
Score difference with first non-orthologous sequence - C.immitis:334 D.pseudoobscura:334

I9NQ24              	100.00%		Q293R5              	100.00%
Bootstrap support for I9NQ24 as seed ortholog is 100%.
Bootstrap support for Q293R5 as seed ortholog is 100%.

Group of orthologs #549. Best score 334 bits
Score difference with first non-orthologous sequence - C.immitis:334 D.pseudoobscura:334

J3KFJ6              	100.00%		Q29HE3              	100.00%
Bootstrap support for J3KFJ6 as seed ortholog is 100%.
Bootstrap support for Q29HE3 as seed ortholog is 100%.

Group of orthologs #550. Best score 333 bits
Score difference with first non-orthologous sequence - C.immitis:333 D.pseudoobscura:333

J3KF58              	100.00%		Q298R8              	100.00%
                    	       		I5ANT7              	12.76%
Bootstrap support for J3KF58 as seed ortholog is 100%.
Bootstrap support for Q298R8 as seed ortholog is 100%.

Group of orthologs #551. Best score 333 bits
Score difference with first non-orthologous sequence - C.immitis:196 D.pseudoobscura:21

I9XK88              	100.00%		Q29AP6              	100.00%
Bootstrap support for I9XK88 as seed ortholog is 100%.
Bootstrap support for Q29AP6 as seed ortholog is 75%.

Group of orthologs #552. Best score 333 bits
Score difference with first non-orthologous sequence - C.immitis:333 D.pseudoobscura:333

J3KAJ3              	100.00%		Q28XG3              	100.00%
Bootstrap support for J3KAJ3 as seed ortholog is 100%.
Bootstrap support for Q28XG3 as seed ortholog is 100%.

Group of orthologs #553. Best score 333 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:94

J3K3W2              	100.00%		Q29A36              	100.00%
Bootstrap support for J3K3W2 as seed ortholog is 96%.
Bootstrap support for Q29A36 as seed ortholog is 93%.

Group of orthologs #554. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 D.pseudoobscura:332

J3KB54              	100.00%		Q28ZX5              	100.00%
Bootstrap support for J3KB54 as seed ortholog is 100%.
Bootstrap support for Q28ZX5 as seed ortholog is 100%.

Group of orthologs #555. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 D.pseudoobscura:332

J0HFH6              	100.00%		Q29KG5              	100.00%
Bootstrap support for J0HFH6 as seed ortholog is 100%.
Bootstrap support for Q29KG5 as seed ortholog is 100%.

Group of orthologs #556. Best score 331 bits
Score difference with first non-orthologous sequence - C.immitis:331 D.pseudoobscura:331

J3KFQ5              	100.00%		Q29IP7              	100.00%
Bootstrap support for J3KFQ5 as seed ortholog is 100%.
Bootstrap support for Q29IP7 as seed ortholog is 100%.

Group of orthologs #557. Best score 331 bits
Score difference with first non-orthologous sequence - C.immitis:331 D.pseudoobscura:331

J3KFP1              	100.00%		Q29M36              	100.00%
Bootstrap support for J3KFP1 as seed ortholog is 100%.
Bootstrap support for Q29M36 as seed ortholog is 100%.

Group of orthologs #558. Best score 330 bits
Score difference with first non-orthologous sequence - C.immitis:330 D.pseudoobscura:330

I9NT40              	100.00%		Q28ZX7              	100.00%
Bootstrap support for I9NT40 as seed ortholog is 100%.
Bootstrap support for Q28ZX7 as seed ortholog is 100%.

Group of orthologs #559. Best score 330 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:50

J3KIS1              	100.00%		Q29AX7              	100.00%
Bootstrap support for J3KIS1 as seed ortholog is 99%.
Bootstrap support for Q29AX7 as seed ortholog is 93%.

Group of orthologs #560. Best score 329 bits
Score difference with first non-orthologous sequence - C.immitis:329 D.pseudoobscura:329

J3KFH6              	100.00%		Q28YL8              	100.00%
Bootstrap support for J3KFH6 as seed ortholog is 100%.
Bootstrap support for Q28YL8 as seed ortholog is 100%.

Group of orthologs #561. Best score 329 bits
Score difference with first non-orthologous sequence - C.immitis:329 D.pseudoobscura:329

J3KFS0              	100.00%		Q296N7              	100.00%
Bootstrap support for J3KFS0 as seed ortholog is 100%.
Bootstrap support for Q296N7 as seed ortholog is 100%.

Group of orthologs #562. Best score 329 bits
Score difference with first non-orthologous sequence - C.immitis:329 D.pseudoobscura:255

J3KIC0              	100.00%		Q296V3              	100.00%
Bootstrap support for J3KIC0 as seed ortholog is 100%.
Bootstrap support for Q296V3 as seed ortholog is 100%.

Group of orthologs #563. Best score 329 bits
Score difference with first non-orthologous sequence - C.immitis:247 D.pseudoobscura:218

J3KL64              	100.00%		Q2LZI7              	100.00%
Bootstrap support for J3KL64 as seed ortholog is 99%.
Bootstrap support for Q2LZI7 as seed ortholog is 100%.

Group of orthologs #564. Best score 328 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:93

J3KEY5              	100.00%		Q29A24              	100.00%
Bootstrap support for J3KEY5 as seed ortholog is 92%.
Bootstrap support for Q29A24 as seed ortholog is 95%.

Group of orthologs #565. Best score 327 bits
Score difference with first non-orthologous sequence - C.immitis:327 D.pseudoobscura:327

J3K695              	100.00%		Q29A25              	100.00%
Bootstrap support for J3K695 as seed ortholog is 100%.
Bootstrap support for Q29A25 as seed ortholog is 100%.

Group of orthologs #566. Best score 327 bits
Score difference with first non-orthologous sequence - C.immitis:327 D.pseudoobscura:327

J3K7N1              	100.00%		Q29BB7              	100.00%
Bootstrap support for J3K7N1 as seed ortholog is 100%.
Bootstrap support for Q29BB7 as seed ortholog is 100%.

Group of orthologs #567. Best score 327 bits
Score difference with first non-orthologous sequence - C.immitis:327 D.pseudoobscura:327

J3K5R3              	100.00%		Q29JW6              	100.00%
Bootstrap support for J3K5R3 as seed ortholog is 100%.
Bootstrap support for Q29JW6 as seed ortholog is 100%.

Group of orthologs #568. Best score 327 bits
Score difference with first non-orthologous sequence - C.immitis:327 D.pseudoobscura:327

J3KEY3              	100.00%		Q29DM5              	100.00%
Bootstrap support for J3KEY3 as seed ortholog is 100%.
Bootstrap support for Q29DM5 as seed ortholog is 100%.

Group of orthologs #569. Best score 327 bits
Score difference with first non-orthologous sequence - C.immitis:327 D.pseudoobscura:327

J3KDZ8              	100.00%		Q29NX2              	100.00%
Bootstrap support for J3KDZ8 as seed ortholog is 100%.
Bootstrap support for Q29NX2 as seed ortholog is 100%.

Group of orthologs #570. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:326 D.pseudoobscura:326

I9XL94              	100.00%		Q28Y18              	100.00%
Bootstrap support for I9XL94 as seed ortholog is 100%.
Bootstrap support for Q28Y18 as seed ortholog is 100%.

Group of orthologs #571. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:326 D.pseudoobscura:326

J0HHA3              	100.00%		Q292P7              	100.00%
Bootstrap support for J0HHA3 as seed ortholog is 100%.
Bootstrap support for Q292P7 as seed ortholog is 100%.

Group of orthologs #572. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:326 D.pseudoobscura:326

J3KGS5              	100.00%		Q29EX3              	100.00%
Bootstrap support for J3KGS5 as seed ortholog is 100%.
Bootstrap support for Q29EX3 as seed ortholog is 100%.

Group of orthologs #573. Best score 324 bits
Score difference with first non-orthologous sequence - C.immitis:324 D.pseudoobscura:324

J3K968              	100.00%		Q292D8              	100.00%
Bootstrap support for J3K968 as seed ortholog is 100%.
Bootstrap support for Q292D8 as seed ortholog is 100%.

Group of orthologs #574. Best score 323 bits
Score difference with first non-orthologous sequence - C.immitis:148 D.pseudoobscura:162

J3KJF9              	100.00%		B5DHR7              	100.00%
Bootstrap support for J3KJF9 as seed ortholog is 99%.
Bootstrap support for B5DHR7 as seed ortholog is 99%.

Group of orthologs #575. Best score 322 bits
Score difference with first non-orthologous sequence - C.immitis:322 D.pseudoobscura:322

J3K019              	100.00%		B5DX31              	100.00%
Bootstrap support for J3K019 as seed ortholog is 100%.
Bootstrap support for B5DX31 as seed ortholog is 100%.

Group of orthologs #576. Best score 322 bits
Score difference with first non-orthologous sequence - C.immitis:322 D.pseudoobscura:322

J3KFK4              	100.00%		Q28YX8              	100.00%
Bootstrap support for J3KFK4 as seed ortholog is 100%.
Bootstrap support for Q28YX8 as seed ortholog is 100%.

Group of orthologs #577. Best score 322 bits
Score difference with first non-orthologous sequence - C.immitis:322 D.pseudoobscura:249

Q1E8M9              	100.00%		Q28YP7              	100.00%
Bootstrap support for Q1E8M9 as seed ortholog is 100%.
Bootstrap support for Q28YP7 as seed ortholog is 100%.

Group of orthologs #578. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 D.pseudoobscura:321

J3K8V7              	100.00%		Q29G92              	100.00%
                    	       		Q299I7              	30.01%
                    	       		B5DTT7              	5.34%
Bootstrap support for J3K8V7 as seed ortholog is 100%.
Bootstrap support for Q29G92 as seed ortholog is 100%.

Group of orthologs #579. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 D.pseudoobscura:321

J3KLT1              	100.00%		Q29FD7              	100.00%
Bootstrap support for J3KLT1 as seed ortholog is 100%.
Bootstrap support for Q29FD7 as seed ortholog is 100%.

Group of orthologs #580. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 D.pseudoobscura:321

Q1E170              	100.00%		Q29EX2              	100.00%
Bootstrap support for Q1E170 as seed ortholog is 100%.
Bootstrap support for Q29EX2 as seed ortholog is 100%.

Group of orthologs #581. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 D.pseudoobscura:321

J3KL68              	100.00%		Q29GW3              	100.00%
Bootstrap support for J3KL68 as seed ortholog is 100%.
Bootstrap support for Q29GW3 as seed ortholog is 100%.

Group of orthologs #582. Best score 320 bits
Score difference with first non-orthologous sequence - C.immitis:320 D.pseudoobscura:320

J0HG74              	100.00%		Q29NT9              	100.00%
Bootstrap support for J0HG74 as seed ortholog is 100%.
Bootstrap support for Q29NT9 as seed ortholog is 100%.

Group of orthologs #583. Best score 320 bits
Score difference with first non-orthologous sequence - C.immitis:320 D.pseudoobscura:320

Q1EA11              	100.00%		I5ANZ0              	100.00%
Bootstrap support for Q1EA11 as seed ortholog is 100%.
Bootstrap support for I5ANZ0 as seed ortholog is 100%.

Group of orthologs #584. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:319 D.pseudoobscura:319

J3K1D1              	100.00%		Q290T2              	100.00%
                    	       		B5DWU6              	13.36%
                    	       		B5DWX7              	12.95%
                    	       		B5DW28              	7.92%
                    	       		Q294W2              	5.99%
Bootstrap support for J3K1D1 as seed ortholog is 100%.
Bootstrap support for Q290T2 as seed ortholog is 100%.

Group of orthologs #585. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:319 D.pseudoobscura:186

J3K2B6              	100.00%		Q297B0              	100.00%
J3K1Z2              	31.21%		Q2M101              	6.21%
Bootstrap support for J3K2B6 as seed ortholog is 100%.
Bootstrap support for Q297B0 as seed ortholog is 100%.

Group of orthologs #586. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:258 D.pseudoobscura:319

J0HE59              	100.00%		Q28WK1              	100.00%
Bootstrap support for J0HE59 as seed ortholog is 100%.
Bootstrap support for Q28WK1 as seed ortholog is 100%.

Group of orthologs #587. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:123

J3K504              	100.00%		Q290T0              	100.00%
Bootstrap support for J3K504 as seed ortholog is 99%.
Bootstrap support for Q290T0 as seed ortholog is 99%.

Group of orthologs #588. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:319 D.pseudoobscura:319

J3K0Q7              	100.00%		Q29GY0              	100.00%
Bootstrap support for J3K0Q7 as seed ortholog is 100%.
Bootstrap support for Q29GY0 as seed ortholog is 100%.

Group of orthologs #589. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:50

J3K492              	100.00%		Q29IR9              	100.00%
Bootstrap support for J3K492 as seed ortholog is 94%.
Bootstrap support for Q29IR9 as seed ortholog is 84%.

Group of orthologs #590. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:317 D.pseudoobscura:317

J3KCR6              	100.00%		Q29C13              	100.00%
                    	       		B5DTW2              	51.48%
Bootstrap support for J3KCR6 as seed ortholog is 100%.
Bootstrap support for Q29C13 as seed ortholog is 100%.

Group of orthologs #591. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:238

J3K4J0              	100.00%		Q2LZS8              	100.00%
                    	       		Q28ZA7              	54.55%
Bootstrap support for J3K4J0 as seed ortholog is 99%.
Bootstrap support for Q2LZS8 as seed ortholog is 100%.

Group of orthologs #592. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:161 D.pseudoobscura:195

J3KIN1              	100.00%		Q29IF8              	100.00%
                    	       		Q28XG0              	8.96%
Bootstrap support for J3KIN1 as seed ortholog is 99%.
Bootstrap support for Q29IF8 as seed ortholog is 100%.

Group of orthologs #593. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:317 D.pseudoobscura:317

J3K4F7              	100.00%		B5E1A1              	100.00%
Bootstrap support for J3K4F7 as seed ortholog is 100%.
Bootstrap support for B5E1A1 as seed ortholog is 100%.

Group of orthologs #594. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:317 D.pseudoobscura:196

J3KAG2              	100.00%		Q28XI8              	100.00%
Bootstrap support for J3KAG2 as seed ortholog is 100%.
Bootstrap support for Q28XI8 as seed ortholog is 99%.

Group of orthologs #595. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:317 D.pseudoobscura:317

J3KEI2              	100.00%		Q292T4              	100.00%
Bootstrap support for J3KEI2 as seed ortholog is 100%.
Bootstrap support for Q292T4 as seed ortholog is 100%.

Group of orthologs #596. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:316 D.pseudoobscura:316

J3K254              	100.00%		Q28YB8              	100.00%
                    	       		B5DHH8              	80.70%
                    	       		B5DHH6              	80.33%
Bootstrap support for J3K254 as seed ortholog is 100%.
Bootstrap support for Q28YB8 as seed ortholog is 100%.

Group of orthologs #597. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:316 D.pseudoobscura:316

J0HHH5              	100.00%		Q2M1A7              	100.00%
Bootstrap support for J0HHH5 as seed ortholog is 100%.
Bootstrap support for Q2M1A7 as seed ortholog is 100%.

Group of orthologs #598. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:316 D.pseudoobscura:257

J3KHR0              	100.00%		Q29DV7              	100.00%
Bootstrap support for J3KHR0 as seed ortholog is 100%.
Bootstrap support for Q29DV7 as seed ortholog is 100%.

Group of orthologs #599. Best score 315 bits
Score difference with first non-orthologous sequence - C.immitis:315 D.pseudoobscura:315

J3KH40              	100.00%		Q297K5              	100.00%
Bootstrap support for J3KH40 as seed ortholog is 100%.
Bootstrap support for Q297K5 as seed ortholog is 100%.

Group of orthologs #600. Best score 314 bits
Score difference with first non-orthologous sequence - C.immitis:243 D.pseudoobscura:238

J3K5A7              	100.00%		B5DZA9              	100.00%
J3K074              	8.45%		Q29KS1              	54.70%
                    	       		B5DZ78              	21.64%
Bootstrap support for J3K5A7 as seed ortholog is 100%.
Bootstrap support for B5DZA9 as seed ortholog is 100%.

Group of orthologs #601. Best score 314 bits
Score difference with first non-orthologous sequence - C.immitis:314 D.pseudoobscura:314

J3KKC0              	100.00%		Q29HK8              	100.00%
                    	       		Q29K61              	6.22%
Bootstrap support for J3KKC0 as seed ortholog is 100%.
Bootstrap support for Q29HK8 as seed ortholog is 100%.

Group of orthologs #602. Best score 313 bits
Score difference with first non-orthologous sequence - C.immitis:313 D.pseudoobscura:55

J3K6L4              	100.00%		Q2LYV4              	100.00%
Bootstrap support for J3K6L4 as seed ortholog is 100%.
Bootstrap support for Q2LYV4 as seed ortholog is 95%.

Group of orthologs #603. Best score 313 bits
Score difference with first non-orthologous sequence - C.immitis:313 D.pseudoobscura:313

J3KIF6              	100.00%		Q29CT9              	100.00%
Bootstrap support for J3KIF6 as seed ortholog is 100%.
Bootstrap support for Q29CT9 as seed ortholog is 100%.

Group of orthologs #604. Best score 312 bits
Score difference with first non-orthologous sequence - C.immitis:312 D.pseudoobscura:312

J3K393              	100.00%		Q29EI4              	100.00%
Bootstrap support for J3K393 as seed ortholog is 100%.
Bootstrap support for Q29EI4 as seed ortholog is 100%.

Group of orthologs #605. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:55

I9NMD2              	100.00%		Q28XF7              	100.00%
J3KKI5              	30.78%		Q28WL9              	32.56%
                    	       		Q29JH2              	31.60%
                    	       		Q28WM0              	30.25%
Bootstrap support for I9NMD2 as seed ortholog is 84%.
Bootstrap support for Q28XF7 as seed ortholog is 83%.

Group of orthologs #606. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:42

I9XJE9              	100.00%		B5DQJ0              	100.00%
                    	       		Q29EV6              	100.00%
Bootstrap support for I9XJE9 as seed ortholog is 100%.
Bootstrap support for B5DQJ0 as seed ortholog is 96%.
Bootstrap support for Q29EV6 as seed ortholog is 95%.

Group of orthologs #607. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:311 D.pseudoobscura:311

J3K6N3              	100.00%		Q297T2              	100.00%
Bootstrap support for J3K6N3 as seed ortholog is 100%.
Bootstrap support for Q297T2 as seed ortholog is 100%.

Group of orthologs #608. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:100

J3K8F5              	100.00%		Q29B06              	100.00%
Bootstrap support for J3K8F5 as seed ortholog is 100%.
Bootstrap support for Q29B06 as seed ortholog is 99%.

Group of orthologs #609. Best score 310 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:310

Q1DKI1              	100.00%		Q291A3              	100.00%
Bootstrap support for Q1DKI1 as seed ortholog is 75%.
Bootstrap support for Q291A3 as seed ortholog is 100%.

Group of orthologs #610. Best score 310 bits
Score difference with first non-orthologous sequence - C.immitis:310 D.pseudoobscura:310

J3KC02              	100.00%		Q29PB8              	100.00%
Bootstrap support for J3KC02 as seed ortholog is 100%.
Bootstrap support for Q29PB8 as seed ortholog is 100%.

Group of orthologs #611. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:309 D.pseudoobscura:137

J3KDX3              	100.00%		Q29PK4              	100.00%
I9NNZ3              	12.60%		Q2M169              	9.58%
                    	       		Q29JS9              	7.91%
Bootstrap support for J3KDX3 as seed ortholog is 100%.
Bootstrap support for Q29PK4 as seed ortholog is 98%.

Group of orthologs #612. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:64

J3K773              	100.00%		B5DKH3              	100.00%
                    	       		Q29G10              	36.94%
Bootstrap support for J3K773 as seed ortholog is 99%.
Bootstrap support for B5DKH3 as seed ortholog is 93%.

Group of orthologs #613. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:309 D.pseudoobscura:309

J3K2G3              	100.00%		Q296M0              	100.00%
Bootstrap support for J3K2G3 as seed ortholog is 100%.
Bootstrap support for Q296M0 as seed ortholog is 100%.

Group of orthologs #614. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:143

J3K8B8              	100.00%		Q296V6              	100.00%
Bootstrap support for J3K8B8 as seed ortholog is 100%.
Bootstrap support for Q296V6 as seed ortholog is 100%.

Group of orthologs #615. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:309

J3K659              	100.00%		Q29BT3              	100.00%
Bootstrap support for J3K659 as seed ortholog is 99%.
Bootstrap support for Q29BT3 as seed ortholog is 100%.

Group of orthologs #616. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:309 D.pseudoobscura:309

J3KD16              	100.00%		Q29F06              	100.00%
Bootstrap support for J3KD16 as seed ortholog is 100%.
Bootstrap support for Q29F06 as seed ortholog is 100%.

Group of orthologs #617. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:309

J3KK60              	100.00%		Q29LJ1              	100.00%
Bootstrap support for J3KK60 as seed ortholog is 81%.
Bootstrap support for Q29LJ1 as seed ortholog is 100%.

Group of orthologs #618. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:113

I9NSL3              	100.00%		Q297P1              	100.00%
                    	       		Q297P0              	8.78%
Bootstrap support for I9NSL3 as seed ortholog is 97%.
Bootstrap support for Q297P1 as seed ortholog is 97%.

Group of orthologs #619. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:308 D.pseudoobscura:308

J3K7Y4              	100.00%		Q29EE0              	100.00%
Bootstrap support for J3K7Y4 as seed ortholog is 100%.
Bootstrap support for Q29EE0 as seed ortholog is 100%.

Group of orthologs #620. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:308 D.pseudoobscura:308

J3K7Q7              	100.00%		Q29J17              	100.00%
Bootstrap support for J3K7Q7 as seed ortholog is 100%.
Bootstrap support for Q29J17 as seed ortholog is 100%.

Group of orthologs #621. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:308 D.pseudoobscura:218

J3KKH1              	100.00%		Q29G24              	100.00%
Bootstrap support for J3KKH1 as seed ortholog is 100%.
Bootstrap support for Q29G24 as seed ortholog is 99%.

Group of orthologs #622. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 D.pseudoobscura:307

J3K489              	100.00%		B5DPB6              	100.00%
Bootstrap support for J3K489 as seed ortholog is 100%.
Bootstrap support for B5DPB6 as seed ortholog is 100%.

Group of orthologs #623. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 D.pseudoobscura:307

J0HH65              	100.00%		Q28YS1              	100.00%
Bootstrap support for J0HH65 as seed ortholog is 100%.
Bootstrap support for Q28YS1 as seed ortholog is 100%.

Group of orthologs #624. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 D.pseudoobscura:307

I9NS04              	100.00%		Q29NY1              	100.00%
Bootstrap support for I9NS04 as seed ortholog is 100%.
Bootstrap support for Q29NY1 as seed ortholog is 100%.

Group of orthologs #625. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 D.pseudoobscura:307

J3K3P2              	100.00%		Q2M0R1              	100.00%
Bootstrap support for J3K3P2 as seed ortholog is 100%.
Bootstrap support for Q2M0R1 as seed ortholog is 100%.

Group of orthologs #626. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 D.pseudoobscura:307

J3K9P6              	100.00%		Q29LG5              	100.00%
Bootstrap support for J3K9P6 as seed ortholog is 100%.
Bootstrap support for Q29LG5 as seed ortholog is 100%.

Group of orthologs #627. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:55

J3KHV1              	100.00%		Q29HY3              	100.00%
Bootstrap support for J3KHV1 as seed ortholog is 100%.
Bootstrap support for Q29HY3 as seed ortholog is 99%.

Group of orthologs #628. Best score 306 bits
Score difference with first non-orthologous sequence - C.immitis:306 D.pseudoobscura:306

J0HHR9              	100.00%		B5DHQ5              	100.00%
Bootstrap support for J0HHR9 as seed ortholog is 100%.
Bootstrap support for B5DHQ5 as seed ortholog is 100%.

Group of orthologs #629. Best score 306 bits
Score difference with first non-orthologous sequence - C.immitis:306 D.pseudoobscura:306

J3K7G8              	100.00%		B5DK39              	100.00%
Bootstrap support for J3K7G8 as seed ortholog is 100%.
Bootstrap support for B5DK39 as seed ortholog is 100%.

Group of orthologs #630. Best score 306 bits
Score difference with first non-orthologous sequence - C.immitis:306 D.pseudoobscura:142

J3K1T5              	100.00%		Q293V2              	100.00%
Bootstrap support for J3K1T5 as seed ortholog is 100%.
Bootstrap support for Q293V2 as seed ortholog is 99%.

Group of orthologs #631. Best score 306 bits
Score difference with first non-orthologous sequence - C.immitis:306 D.pseudoobscura:306

J3KK03              	100.00%		B5E0U9              	100.00%
Bootstrap support for J3KK03 as seed ortholog is 100%.
Bootstrap support for B5E0U9 as seed ortholog is 100%.

Group of orthologs #632. Best score 306 bits
Score difference with first non-orthologous sequence - C.immitis:254 D.pseudoobscura:247

Q1DPU4              	100.00%		Q29L19              	100.00%
Bootstrap support for Q1DPU4 as seed ortholog is 100%.
Bootstrap support for Q29L19 as seed ortholog is 100%.

Group of orthologs #633. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:186

J3KA00              	100.00%		B5E0G3              	100.00%
                    	       		Q293S6              	9.68%
Bootstrap support for J3KA00 as seed ortholog is 97%.
Bootstrap support for B5E0G3 as seed ortholog is 100%.

Group of orthologs #634. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:134

Q1E7Y4              	100.00%		B5E1L1              	100.00%
Bootstrap support for Q1E7Y4 as seed ortholog is 98%.
Bootstrap support for B5E1L1 as seed ortholog is 98%.

Group of orthologs #635. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 D.pseudoobscura:305

J3KBH0              	100.00%		Q29BK7              	100.00%
Bootstrap support for J3KBH0 as seed ortholog is 100%.
Bootstrap support for Q29BK7 as seed ortholog is 100%.

Group of orthologs #636. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 D.pseudoobscura:305

J3K3S7              	100.00%		Q29K75              	100.00%
Bootstrap support for J3K3S7 as seed ortholog is 100%.
Bootstrap support for Q29K75 as seed ortholog is 100%.

Group of orthologs #637. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 D.pseudoobscura:305

J3KJW7              	100.00%		Q29JD2              	100.00%
Bootstrap support for J3KJW7 as seed ortholog is 100%.
Bootstrap support for Q29JD2 as seed ortholog is 100%.

Group of orthologs #638. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:304 D.pseudoobscura:126

J3K0C9              	100.00%		Q290J2              	100.00%
Bootstrap support for J3K0C9 as seed ortholog is 100%.
Bootstrap support for Q290J2 as seed ortholog is 99%.

Group of orthologs #639. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:304 D.pseudoobscura:304

J3KHR4              	100.00%		Q295E6              	100.00%
Bootstrap support for J3KHR4 as seed ortholog is 100%.
Bootstrap support for Q295E6 as seed ortholog is 100%.

Group of orthologs #640. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:304 D.pseudoobscura:304

J3KL07              	100.00%		Q298I7              	100.00%
Bootstrap support for J3KL07 as seed ortholog is 100%.
Bootstrap support for Q298I7 as seed ortholog is 100%.

Group of orthologs #641. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:304 D.pseudoobscura:304

J3K6H4              	100.00%		Q2M1D2              	100.00%
Bootstrap support for J3K6H4 as seed ortholog is 100%.
Bootstrap support for Q2M1D2 as seed ortholog is 100%.

Group of orthologs #642. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:260 D.pseudoobscura:19

J3KA40              	100.00%		Q2M0P5              	100.00%
Bootstrap support for J3KA40 as seed ortholog is 100%.
Bootstrap support for Q2M0P5 as seed ortholog is 83%.

Group of orthologs #643. Best score 303 bits
Score difference with first non-orthologous sequence - C.immitis:121 D.pseudoobscura:183

J3K3U0              	100.00%		Q2LZF1              	100.00%
Bootstrap support for J3K3U0 as seed ortholog is 98%.
Bootstrap support for Q2LZF1 as seed ortholog is 99%.

Group of orthologs #644. Best score 303 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:67

J3K8Y8              	100.00%		Q2LYK4              	100.00%
Bootstrap support for J3K8Y8 as seed ortholog is 99%.
Bootstrap support for Q2LYK4 as seed ortholog is 97%.

Group of orthologs #645. Best score 303 bits
Score difference with first non-orthologous sequence - C.immitis:194 D.pseudoobscura:303

J3KHI1              	100.00%		Q2M0W7              	100.00%
Bootstrap support for J3KHI1 as seed ortholog is 99%.
Bootstrap support for Q2M0W7 as seed ortholog is 100%.

Group of orthologs #646. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:228 D.pseudoobscura:208

J3KCU0              	100.00%		Q29H34              	100.00%
                    	       		Q29H33              	56.83%
Bootstrap support for J3KCU0 as seed ortholog is 100%.
Bootstrap support for Q29H34 as seed ortholog is 100%.

Group of orthologs #647. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:302 D.pseudoobscura:302

J3K753              	100.00%		Q29CK9              	100.00%
Bootstrap support for J3K753 as seed ortholog is 100%.
Bootstrap support for Q29CK9 as seed ortholog is 100%.

Group of orthologs #648. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:158

J3KGL8              	100.00%		Q29N73              	100.00%
Bootstrap support for J3KGL8 as seed ortholog is 100%.
Bootstrap support for Q29N73 as seed ortholog is 100%.

Group of orthologs #649. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:302 D.pseudoobscura:302

Q1DHH9              	100.00%		Q29JY7              	100.00%
Bootstrap support for Q1DHH9 as seed ortholog is 100%.
Bootstrap support for Q29JY7 as seed ortholog is 100%.

Group of orthologs #650. Best score 301 bits
Score difference with first non-orthologous sequence - C.immitis:301 D.pseudoobscura:301

I9NNU2              	100.00%		Q292X3              	100.00%
                    	       		I5ANQ5              	40.25%
Bootstrap support for I9NNU2 as seed ortholog is 100%.
Bootstrap support for Q292X3 as seed ortholog is 100%.

Group of orthologs #651. Best score 301 bits
Score difference with first non-orthologous sequence - C.immitis:301 D.pseudoobscura:301

I9NPA4              	100.00%		Q29I22              	100.00%
                    	       		B5DPL2              	18.82%
Bootstrap support for I9NPA4 as seed ortholog is 100%.
Bootstrap support for Q29I22 as seed ortholog is 100%.

Group of orthologs #652. Best score 301 bits
Score difference with first non-orthologous sequence - C.immitis:301 D.pseudoobscura:301

Q1E9Q9              	100.00%		Q29FE7              	100.00%
Bootstrap support for Q1E9Q9 as seed ortholog is 100%.
Bootstrap support for Q29FE7 as seed ortholog is 100%.

Group of orthologs #653. Best score 300 bits
Score difference with first non-orthologous sequence - C.immitis:300 D.pseudoobscura:300

J3KG82              	100.00%		Q29HM4              	100.00%
Bootstrap support for J3KG82 as seed ortholog is 100%.
Bootstrap support for Q29HM4 as seed ortholog is 100%.

Group of orthologs #654. Best score 299 bits
Score difference with first non-orthologous sequence - C.immitis:299 D.pseudoobscura:299

J3K2V7              	100.00%		I5AMW3              	100.00%
Bootstrap support for J3K2V7 as seed ortholog is 100%.
Bootstrap support for I5AMW3 as seed ortholog is 100%.

Group of orthologs #655. Best score 299 bits
Score difference with first non-orthologous sequence - C.immitis:299 D.pseudoobscura:209

J3KGW7              	100.00%		Q29EE2              	100.00%
Bootstrap support for J3KGW7 as seed ortholog is 100%.
Bootstrap support for Q29EE2 as seed ortholog is 100%.

Group of orthologs #656. Best score 298 bits
Score difference with first non-orthologous sequence - C.immitis:298 D.pseudoobscura:298

I9NT75              	100.00%		B5DMG1              	100.00%
                    	       		Q296J5              	45.33%
Bootstrap support for I9NT75 as seed ortholog is 100%.
Bootstrap support for B5DMG1 as seed ortholog is 100%.

Group of orthologs #657. Best score 298 bits
Score difference with first non-orthologous sequence - C.immitis:189 D.pseudoobscura:147

J3K2K5              	100.00%		B5DUQ0              	100.00%
Bootstrap support for J3K2K5 as seed ortholog is 100%.
Bootstrap support for B5DUQ0 as seed ortholog is 100%.

Group of orthologs #658. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:5 D.pseudoobscura:160

J3KAP8              	100.00%		Q28ZU1              	100.00%
J3K5X0              	8.32%		
Bootstrap support for J3KAP8 as seed ortholog is 49%.
Alternative seed ortholog is J3KCH7 (5 bits away from this cluster)
Bootstrap support for Q28ZU1 as seed ortholog is 99%.

Group of orthologs #659. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:297 D.pseudoobscura:192

J3K5Q6              	100.00%		Q291H6              	100.00%
Bootstrap support for J3K5Q6 as seed ortholog is 100%.
Bootstrap support for Q291H6 as seed ortholog is 100%.

Group of orthologs #660. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:23

J3K531              	100.00%		Q294V1              	100.00%
Bootstrap support for J3K531 as seed ortholog is 90%.
Bootstrap support for Q294V1 as seed ortholog is 71%.
Alternative seed ortholog is Q28YC5 (23 bits away from this cluster)

Group of orthologs #661. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:297 D.pseudoobscura:297

J3KE97              	100.00%		Q29NB3              	100.00%
Bootstrap support for J3KE97 as seed ortholog is 100%.
Bootstrap support for Q29NB3 as seed ortholog is 100%.

Group of orthologs #662. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:296 D.pseudoobscura:175

J3KFA1              	100.00%		Q2M015              	100.00%
                    	       		Q29DG4              	12.31%
Bootstrap support for J3KFA1 as seed ortholog is 100%.
Bootstrap support for Q2M015 as seed ortholog is 99%.

Group of orthologs #663. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:296 D.pseudoobscura:296

J3KF46              	100.00%		B5DSA7              	100.00%
Bootstrap support for J3KF46 as seed ortholog is 100%.
Bootstrap support for B5DSA7 as seed ortholog is 100%.

Group of orthologs #664. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:296 D.pseudoobscura:296

J3K0G8              	100.00%		Q297F0              	100.00%
Bootstrap support for J3K0G8 as seed ortholog is 100%.
Bootstrap support for Q297F0 as seed ortholog is 100%.

Group of orthologs #665. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:296 D.pseudoobscura:296

J3K4V6              	100.00%		Q295Q5              	100.00%
Bootstrap support for J3K4V6 as seed ortholog is 100%.
Bootstrap support for Q295Q5 as seed ortholog is 100%.

Group of orthologs #666. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:296

J3K7J7              	100.00%		Q29E71              	100.00%
Bootstrap support for J3K7J7 as seed ortholog is 99%.
Bootstrap support for Q29E71 as seed ortholog is 100%.

Group of orthologs #667. Best score 295 bits
Score difference with first non-orthologous sequence - C.immitis:295 D.pseudoobscura:295

J3KDJ3              	100.00%		Q29DN1              	100.00%
Bootstrap support for J3KDJ3 as seed ortholog is 100%.
Bootstrap support for Q29DN1 as seed ortholog is 100%.

Group of orthologs #668. Best score 295 bits
Score difference with first non-orthologous sequence - C.immitis:295 D.pseudoobscura:295

J3KEQ2              	100.00%		Q29MS7              	100.00%
Bootstrap support for J3KEQ2 as seed ortholog is 100%.
Bootstrap support for Q29MS7 as seed ortholog is 100%.

Group of orthologs #669. Best score 295 bits
Score difference with first non-orthologous sequence - C.immitis:295 D.pseudoobscura:200

J3KHZ0              	100.00%		Q2M0G0              	100.00%
Bootstrap support for J3KHZ0 as seed ortholog is 100%.
Bootstrap support for Q2M0G0 as seed ortholog is 100%.

Group of orthologs #670. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 D.pseudoobscura:294

J0HGE3              	100.00%		Q28ZI4              	100.00%
                    	       		Q29PG9              	15.77%
Bootstrap support for J0HGE3 as seed ortholog is 100%.
Bootstrap support for Q28ZI4 as seed ortholog is 100%.

Group of orthologs #671. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 D.pseudoobscura:294

J3K9S0              	100.00%		B5DHY5              	100.00%
Bootstrap support for J3K9S0 as seed ortholog is 100%.
Bootstrap support for B5DHY5 as seed ortholog is 100%.

Group of orthologs #672. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:146

J3KEQ0              	100.00%		Q28YL4              	100.00%
Bootstrap support for J3KEQ0 as seed ortholog is 99%.
Bootstrap support for Q28YL4 as seed ortholog is 99%.

Group of orthologs #673. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 D.pseudoobscura:294

J3KGY4              	100.00%		I7LZD2              	100.00%
Bootstrap support for J3KGY4 as seed ortholog is 100%.
Bootstrap support for I7LZD2 as seed ortholog is 100%.

Group of orthologs #674. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:233 D.pseudoobscura:196

J3KM36              	100.00%		Q29GF7              	100.00%
Bootstrap support for J3KM36 as seed ortholog is 100%.
Bootstrap support for Q29GF7 as seed ortholog is 100%.

Group of orthologs #675. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 D.pseudoobscura:294

J3KJQ1              	100.00%		Q29K04              	100.00%
Bootstrap support for J3KJQ1 as seed ortholog is 100%.
Bootstrap support for Q29K04 as seed ortholog is 100%.

Group of orthologs #676. Best score 293 bits
Score difference with first non-orthologous sequence - C.immitis:293 D.pseudoobscura:293

J3KKZ6              	100.00%		B5DIE4              	100.00%
Bootstrap support for J3KKZ6 as seed ortholog is 100%.
Bootstrap support for B5DIE4 as seed ortholog is 100%.

Group of orthologs #677. Best score 293 bits
Score difference with first non-orthologous sequence - C.immitis:211 D.pseudoobscura:62

I9NP72              	100.00%		Q298L4              	100.00%
Bootstrap support for I9NP72 as seed ortholog is 100%.
Bootstrap support for Q298L4 as seed ortholog is 94%.

Group of orthologs #678. Best score 293 bits
Score difference with first non-orthologous sequence - C.immitis:293 D.pseudoobscura:247

J3K3K4              	100.00%		Q292B2              	100.00%
Bootstrap support for J3K3K4 as seed ortholog is 100%.
Bootstrap support for Q292B2 as seed ortholog is 100%.

Group of orthologs #679. Best score 293 bits
Score difference with first non-orthologous sequence - C.immitis:293 D.pseudoobscura:293

J3KIE5              	100.00%		Q292H6              	100.00%
Bootstrap support for J3KIE5 as seed ortholog is 100%.
Bootstrap support for Q292H6 as seed ortholog is 100%.

Group of orthologs #680. Best score 293 bits
Score difference with first non-orthologous sequence - C.immitis:293 D.pseudoobscura:293

J3KAM0              	100.00%		Q2LZF8              	100.00%
Bootstrap support for J3KAM0 as seed ortholog is 100%.
Bootstrap support for Q2LZF8 as seed ortholog is 100%.

Group of orthologs #681. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:150

Q1E9T9              	100.00%		B5DM48              	100.00%
Bootstrap support for Q1E9T9 as seed ortholog is 99%.
Bootstrap support for B5DM48 as seed ortholog is 99%.

Group of orthologs #682. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:290 D.pseudoobscura:290

J3KEZ9              	100.00%		B5DKH5              	100.00%
Bootstrap support for J3KEZ9 as seed ortholog is 100%.
Bootstrap support for B5DKH5 as seed ortholog is 100%.

Group of orthologs #683. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:176

J3KHA7              	100.00%		B5DZZ7              	100.00%
Bootstrap support for J3KHA7 as seed ortholog is 99%.
Bootstrap support for B5DZZ7 as seed ortholog is 99%.

Group of orthologs #684. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:290 D.pseudoobscura:290

J3KA43              	100.00%		Q29DY4              	100.00%
Bootstrap support for J3KA43 as seed ortholog is 100%.
Bootstrap support for Q29DY4 as seed ortholog is 100%.

Group of orthologs #685. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:99 D.pseudoobscura:151

J3K4Q9              	100.00%		Q29KH3              	100.00%
Bootstrap support for J3K4Q9 as seed ortholog is 96%.
Bootstrap support for Q29KH3 as seed ortholog is 99%.

Group of orthologs #686. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:289 D.pseudoobscura:289

J3K6R2              	100.00%		Q2LYM6              	100.00%
Bootstrap support for J3K6R2 as seed ortholog is 100%.
Bootstrap support for Q2LYM6 as seed ortholog is 100%.

Group of orthologs #687. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:288 D.pseudoobscura:288

J3K9C8              	100.00%		Q29E65              	100.00%
                    	       		Q29H73              	51.55%
                    	       		Q29GY2              	16.03%
                    	       		Q29KJ3              	13.39%
                    	       		B5DJS9              	9.56%
Bootstrap support for J3K9C8 as seed ortholog is 100%.
Bootstrap support for Q29E65 as seed ortholog is 100%.

Group of orthologs #688. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:16

I9NPH5              	100.00%		Q295U1              	100.00%
Bootstrap support for I9NPH5 as seed ortholog is 99%.
Bootstrap support for Q295U1 as seed ortholog is 68%.
Alternative seed ortholog is Q29PJ0 (16 bits away from this cluster)

Group of orthologs #689. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:200 D.pseudoobscura:288

J3K2W8              	100.00%		Q29C17              	100.00%
Bootstrap support for J3K2W8 as seed ortholog is 100%.
Bootstrap support for Q29C17 as seed ortholog is 100%.

Group of orthologs #690. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:288 D.pseudoobscura:288

J3KIL6              	100.00%		Q29DW0              	100.00%
Bootstrap support for J3KIL6 as seed ortholog is 100%.
Bootstrap support for Q29DW0 as seed ortholog is 100%.

Group of orthologs #691. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:237 D.pseudoobscura:288

J3KFM2              	100.00%		Q29JX1              	100.00%
Bootstrap support for J3KFM2 as seed ortholog is 100%.
Bootstrap support for Q29JX1 as seed ortholog is 100%.

Group of orthologs #692. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:287

J3K4N3              	100.00%		B5DX70              	100.00%
                    	       		I5APV8              	65.35%
                    	       		B5DWY2              	50.47%
Bootstrap support for J3K4N3 as seed ortholog is 93%.
Bootstrap support for B5DX70 as seed ortholog is 100%.

Group of orthologs #693. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 D.pseudoobscura:74

J3K5A9              	100.00%		B5DLT3              	100.00%
                    	       		Q29EH9              	11.05%
Bootstrap support for J3K5A9 as seed ortholog is 100%.
Bootstrap support for B5DLT3 as seed ortholog is 99%.

Group of orthologs #694. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 D.pseudoobscura:146

J3KIJ6              	100.00%		Q2M187              	100.00%
                    	       		Q29JC3              	14.18%
Bootstrap support for J3KIJ6 as seed ortholog is 100%.
Bootstrap support for Q2M187 as seed ortholog is 100%.

Group of orthologs #695. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:25 D.pseudoobscura:28

I9NQ47              	100.00%		Q29E52              	100.00%
Bootstrap support for I9NQ47 as seed ortholog is 75%.
Bootstrap support for Q29E52 as seed ortholog is 72%.
Alternative seed ortholog is B5DKW1 (28 bits away from this cluster)

Group of orthologs #696. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 D.pseudoobscura:36

J3K0S0              	100.00%		Q29GT7              	100.00%
Bootstrap support for J3K0S0 as seed ortholog is 100%.
Bootstrap support for Q29GT7 as seed ortholog is 88%.

Group of orthologs #697. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 D.pseudoobscura:287

J3K0N3              	100.00%		Q2M0I6              	100.00%
Bootstrap support for J3K0N3 as seed ortholog is 100%.
Bootstrap support for Q2M0I6 as seed ortholog is 100%.

Group of orthologs #698. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:287

J3KB49              	100.00%		Q29JK3              	100.00%
Bootstrap support for J3KB49 as seed ortholog is 94%.
Bootstrap support for Q29JK3 as seed ortholog is 100%.

Group of orthologs #699. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:232 D.pseudoobscura:154

Q1DZQ0              	100.00%		Q29BI5              	100.00%
Bootstrap support for Q1DZQ0 as seed ortholog is 99%.
Bootstrap support for Q29BI5 as seed ortholog is 99%.

Group of orthologs #700. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 D.pseudoobscura:287

J3KIE0              	100.00%		Q29N57              	100.00%
Bootstrap support for J3KIE0 as seed ortholog is 100%.
Bootstrap support for Q29N57 as seed ortholog is 100%.

Group of orthologs #701. Best score 286 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:78

J3K3H9              	100.00%		B5DP50              	100.00%
                    	       		B5DP49              	79.23%
                    	       		Q29E87              	32.51%
Bootstrap support for J3K3H9 as seed ortholog is 100%.
Bootstrap support for B5DP50 as seed ortholog is 99%.

Group of orthologs #702. Best score 286 bits
Score difference with first non-orthologous sequence - C.immitis:286 D.pseudoobscura:194

J3KJ76              	100.00%		Q28X36              	100.00%
Bootstrap support for J3KJ76 as seed ortholog is 100%.
Bootstrap support for Q28X36 as seed ortholog is 100%.

Group of orthologs #703. Best score 285 bits
Score difference with first non-orthologous sequence - C.immitis:285 D.pseudoobscura:285

J3K8M2              	100.00%		B5DHM4              	100.00%
Bootstrap support for J3K8M2 as seed ortholog is 100%.
Bootstrap support for B5DHM4 as seed ortholog is 100%.

Group of orthologs #704. Best score 285 bits
Score difference with first non-orthologous sequence - C.immitis:285 D.pseudoobscura:285

J3K9B3              	100.00%		Q296E3              	100.00%
Bootstrap support for J3K9B3 as seed ortholog is 100%.
Bootstrap support for Q296E3 as seed ortholog is 100%.

Group of orthologs #705. Best score 285 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:136

J3K4B8              	100.00%		Q29ES8              	100.00%
Bootstrap support for J3K4B8 as seed ortholog is 99%.
Bootstrap support for Q29ES8 as seed ortholog is 99%.

Group of orthologs #706. Best score 285 bits
Score difference with first non-orthologous sequence - C.immitis:285 D.pseudoobscura:285

J3KJ18              	100.00%		Q298U4              	100.00%
Bootstrap support for J3KJ18 as seed ortholog is 100%.
Bootstrap support for Q298U4 as seed ortholog is 100%.

Group of orthologs #707. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:284 D.pseudoobscura:284

J3K2Z4              	100.00%		Q28YP6              	100.00%
Bootstrap support for J3K2Z4 as seed ortholog is 100%.
Bootstrap support for Q28YP6 as seed ortholog is 100%.

Group of orthologs #708. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:284 D.pseudoobscura:284

J3K5Z9              	100.00%		Q29GM0              	100.00%
Bootstrap support for J3K5Z9 as seed ortholog is 100%.
Bootstrap support for Q29GM0 as seed ortholog is 100%.

Group of orthologs #709. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:166

J3KK79              	100.00%		Q28Z52              	100.00%
Bootstrap support for J3KK79 as seed ortholog is 100%.
Bootstrap support for Q28Z52 as seed ortholog is 99%.

Group of orthologs #710. Best score 283 bits
Score difference with first non-orthologous sequence - C.immitis:70 D.pseudoobscura:283

J3KF59              	100.00%		Q29EG3              	100.00%
                    	       		Q29GS4              	10.18%
                    	       		Q28X77              	9.27%
                    	       		B5DN57              	8.45%
Bootstrap support for J3KF59 as seed ortholog is 90%.
Bootstrap support for Q29EG3 as seed ortholog is 100%.

Group of orthologs #711. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:179

J3K8P7              	100.00%		Q29GE7              	100.00%
                    	       		B5DHA3              	71.63%
                    	       		B5DZ68              	5.77%
Bootstrap support for J3K8P7 as seed ortholog is 100%.
Bootstrap support for Q29GE7 as seed ortholog is 100%.

Group of orthologs #712. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:282

I9NPC1              	100.00%		B5DR47              	100.00%
                    	       		B5DVZ7              	49.54%
Bootstrap support for I9NPC1 as seed ortholog is 100%.
Bootstrap support for B5DR47 as seed ortholog is 100%.

Group of orthologs #713. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:221 D.pseudoobscura:218

J3K2W2              	100.00%		Q28YR7              	100.00%
Bootstrap support for J3K2W2 as seed ortholog is 100%.
Bootstrap support for Q28YR7 as seed ortholog is 100%.

Group of orthologs #714. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:84

J3KD26              	100.00%		B5DZ84              	100.00%
Bootstrap support for J3KD26 as seed ortholog is 99%.
Bootstrap support for B5DZ84 as seed ortholog is 99%.

Group of orthologs #715. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:282

J3KF71              	100.00%		Q28WT7              	100.00%
Bootstrap support for J3KF71 as seed ortholog is 100%.
Bootstrap support for Q28WT7 as seed ortholog is 100%.

Group of orthologs #716. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:282

J3K8S4              	100.00%		Q29KS5              	100.00%
Bootstrap support for J3K8S4 as seed ortholog is 100%.
Bootstrap support for Q29KS5 as seed ortholog is 100%.

Group of orthologs #717. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 D.pseudoobscura:282

J3KIS5              	100.00%		Q2LZ44              	100.00%
Bootstrap support for J3KIS5 as seed ortholog is 100%.
Bootstrap support for Q2LZ44 as seed ortholog is 100%.

Group of orthologs #718. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:281 D.pseudoobscura:281

J3KEJ9              	100.00%		Q297I8              	100.00%
                    	       		Q29LM4              	23.73%
Bootstrap support for J3KEJ9 as seed ortholog is 100%.
Bootstrap support for Q297I8 as seed ortholog is 100%.

Group of orthologs #719. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:197

I9NNB3              	100.00%		Q28XY6              	100.00%
Bootstrap support for I9NNB3 as seed ortholog is 100%.
Bootstrap support for Q28XY6 as seed ortholog is 100%.

Group of orthologs #720. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:281 D.pseudoobscura:281

J3K8S5              	100.00%		Q28Y31              	100.00%
Bootstrap support for J3K8S5 as seed ortholog is 100%.
Bootstrap support for Q28Y31 as seed ortholog is 100%.

Group of orthologs #721. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:281 D.pseudoobscura:236

J3KEA4              	100.00%		Q28WK3              	100.00%
Bootstrap support for J3KEA4 as seed ortholog is 100%.
Bootstrap support for Q28WK3 as seed ortholog is 99%.

Group of orthologs #722. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:281 D.pseudoobscura:281

J3KKP2              	100.00%		Q29AI2              	100.00%
Bootstrap support for J3KKP2 as seed ortholog is 100%.
Bootstrap support for Q29AI2 as seed ortholog is 100%.

Group of orthologs #723. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:146 D.pseudoobscura:81

J3KH69              	100.00%		B5DVF8              	100.00%
Bootstrap support for J3KH69 as seed ortholog is 100%.
Bootstrap support for B5DVF8 as seed ortholog is 99%.

Group of orthologs #724. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 D.pseudoobscura:280

J3K661              	100.00%		Q29I23              	100.00%
Bootstrap support for J3K661 as seed ortholog is 100%.
Bootstrap support for Q29I23 as seed ortholog is 100%.

Group of orthologs #725. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 D.pseudoobscura:280

J3K2X5              	100.00%		Q29MC1              	100.00%
Bootstrap support for J3K2X5 as seed ortholog is 100%.
Bootstrap support for Q29MC1 as seed ortholog is 100%.

Group of orthologs #726. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 D.pseudoobscura:280

J3KCG6              	100.00%		Q29N70              	100.00%
Bootstrap support for J3KCG6 as seed ortholog is 100%.
Bootstrap support for Q29N70 as seed ortholog is 100%.

Group of orthologs #727. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 D.pseudoobscura:280

J3KK16              	100.00%		Q29J55              	100.00%
Bootstrap support for J3KK16 as seed ortholog is 100%.
Bootstrap support for Q29J55 as seed ortholog is 100%.

Group of orthologs #728. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:279 D.pseudoobscura:279

I9XK40              	100.00%		Q29FB8              	100.00%
Bootstrap support for I9XK40 as seed ortholog is 100%.
Bootstrap support for Q29FB8 as seed ortholog is 100%.

Group of orthologs #729. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:279 D.pseudoobscura:279

J3K8S2              	100.00%		Q295L4              	100.00%
Bootstrap support for J3K8S2 as seed ortholog is 100%.
Bootstrap support for Q295L4 as seed ortholog is 100%.

Group of orthologs #730. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:279 D.pseudoobscura:279

J3K8F7              	100.00%		Q2M0P7              	100.00%
Bootstrap support for J3K8F7 as seed ortholog is 100%.
Bootstrap support for Q2M0P7 as seed ortholog is 100%.

Group of orthologs #731. Best score 278 bits
Score difference with first non-orthologous sequence - C.immitis:278 D.pseudoobscura:278

J3K654              	100.00%		Q295D1              	100.00%
Bootstrap support for J3K654 as seed ortholog is 100%.
Bootstrap support for Q295D1 as seed ortholog is 100%.

Group of orthologs #732. Best score 278 bits
Score difference with first non-orthologous sequence - C.immitis:278 D.pseudoobscura:278

J3K2P6              	100.00%		Q29BE1              	100.00%
Bootstrap support for J3K2P6 as seed ortholog is 100%.
Bootstrap support for Q29BE1 as seed ortholog is 100%.

Group of orthologs #733. Best score 278 bits
Score difference with first non-orthologous sequence - C.immitis:278 D.pseudoobscura:278

J3KEF3              	100.00%		Q293F6              	100.00%
Bootstrap support for J3KEF3 as seed ortholog is 100%.
Bootstrap support for Q293F6 as seed ortholog is 100%.

Group of orthologs #734. Best score 278 bits
Score difference with first non-orthologous sequence - C.immitis:278 D.pseudoobscura:278

I9NQC0              	100.00%		Q29PM1              	100.00%
Bootstrap support for I9NQC0 as seed ortholog is 100%.
Bootstrap support for Q29PM1 as seed ortholog is 100%.

Group of orthologs #735. Best score 278 bits
Score difference with first non-orthologous sequence - C.immitis:278 D.pseudoobscura:278

Q1E1R2              	100.00%		Q29J14              	100.00%
Bootstrap support for Q1E1R2 as seed ortholog is 100%.
Bootstrap support for Q29J14 as seed ortholog is 100%.

Group of orthologs #736. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 D.pseudoobscura:277

J0HFE8              	100.00%		Q2M0V5              	100.00%
                    	       		B5DHT6              	78.80%
                    	       		B5DID3              	25.12%
Bootstrap support for J0HFE8 as seed ortholog is 100%.
Bootstrap support for Q2M0V5 as seed ortholog is 100%.

Group of orthologs #737. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 D.pseudoobscura:277

J3K144              	100.00%		Q2LZL6              	100.00%
                    	       		Q29BY0              	35.55%
Bootstrap support for J3K144 as seed ortholog is 100%.
Bootstrap support for Q2LZL6 as seed ortholog is 100%.

Group of orthologs #738. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 D.pseudoobscura:277

J3KB64              	100.00%		Q299C9              	100.00%
Bootstrap support for J3KB64 as seed ortholog is 100%.
Bootstrap support for Q299C9 as seed ortholog is 100%.

Group of orthologs #739. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 D.pseudoobscura:277

J3KIG8              	100.00%		Q290C0              	100.00%
Bootstrap support for J3KIG8 as seed ortholog is 100%.
Bootstrap support for Q290C0 as seed ortholog is 100%.

Group of orthologs #740. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 D.pseudoobscura:154

J3KAT4              	100.00%		Q29P36              	100.00%
Bootstrap support for J3KAT4 as seed ortholog is 100%.
Bootstrap support for Q29P36 as seed ortholog is 99%.

Group of orthologs #741. Best score 276 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:276

J3KJL4              	100.00%		Q295B7              	100.00%
Bootstrap support for J3KJL4 as seed ortholog is 99%.
Bootstrap support for Q295B7 as seed ortholog is 100%.

Group of orthologs #742. Best score 276 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:19

J3K3P6              	100.00%		Q2M1A2              	100.00%
Bootstrap support for J3K3P6 as seed ortholog is 99%.
Bootstrap support for Q2M1A2 as seed ortholog is 61%.
Alternative seed ortholog is B5E183 (19 bits away from this cluster)

Group of orthologs #743. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 D.pseudoobscura:275

J0HE18              	100.00%		B5DIQ1              	100.00%
Bootstrap support for J0HE18 as seed ortholog is 100%.
Bootstrap support for B5DIQ1 as seed ortholog is 100%.

Group of orthologs #744. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 D.pseudoobscura:184

J3K7R6              	100.00%		B5DPJ4              	100.00%
Bootstrap support for J3K7R6 as seed ortholog is 100%.
Bootstrap support for B5DPJ4 as seed ortholog is 100%.

Group of orthologs #745. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 D.pseudoobscura:275

J3KCD9              	100.00%		Q28YM2              	100.00%
Bootstrap support for J3KCD9 as seed ortholog is 100%.
Bootstrap support for Q28YM2 as seed ortholog is 100%.

Group of orthologs #746. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 D.pseudoobscura:189

J3K8S0              	100.00%		Q2LYK5              	100.00%
Bootstrap support for J3K8S0 as seed ortholog is 100%.
Bootstrap support for Q2LYK5 as seed ortholog is 99%.

Group of orthologs #747. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 D.pseudoobscura:275

J3KJX2              	100.00%		Q29L43              	100.00%
Bootstrap support for J3KJX2 as seed ortholog is 100%.
Bootstrap support for Q29L43 as seed ortholog is 100%.

Group of orthologs #748. Best score 274 bits
Score difference with first non-orthologous sequence - C.immitis:49 D.pseudoobscura:140

J3K4P1              	100.00%		Q299T0              	100.00%
Bootstrap support for J3K4P1 as seed ortholog is 98%.
Bootstrap support for Q299T0 as seed ortholog is 100%.

Group of orthologs #749. Best score 274 bits
Score difference with first non-orthologous sequence - C.immitis:274 D.pseudoobscura:28

J3KG34              	100.00%		Q28YV1              	100.00%
Bootstrap support for J3KG34 as seed ortholog is 100%.
Bootstrap support for Q28YV1 as seed ortholog is 92%.

Group of orthologs #750. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 D.pseudoobscura:272

J3KDJ8              	100.00%		Q29BW3              	100.00%
                    	       		Q29CJ1              	100.00%
Bootstrap support for J3KDJ8 as seed ortholog is 100%.
Bootstrap support for Q29BW3 as seed ortholog is 100%.
Bootstrap support for Q29CJ1 as seed ortholog is 100%.

Group of orthologs #751. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 D.pseudoobscura:272

J3KIL3              	100.00%		Q296T4              	100.00%
Bootstrap support for J3KIL3 as seed ortholog is 100%.
Bootstrap support for Q296T4 as seed ortholog is 100%.

Group of orthologs #752. Best score 271 bits
Score difference with first non-orthologous sequence - C.immitis:220 D.pseudoobscura:180

J3KEG3              	100.00%		Q29GJ0              	100.00%
                    	       		Q291Z5              	27.15%
Bootstrap support for J3KEG3 as seed ortholog is 100%.
Bootstrap support for Q29GJ0 as seed ortholog is 99%.

Group of orthologs #753. Best score 271 bits
Score difference with first non-orthologous sequence - C.immitis:271 D.pseudoobscura:271

J3K2J1              	100.00%		Q28ZG2              	100.00%
Bootstrap support for J3K2J1 as seed ortholog is 100%.
Bootstrap support for Q28ZG2 as seed ortholog is 100%.

Group of orthologs #754. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 D.pseudoobscura:270

J3KHW0              	100.00%		B5DVW4              	100.00%
Bootstrap support for J3KHW0 as seed ortholog is 100%.
Bootstrap support for B5DVW4 as seed ortholog is 100%.

Group of orthologs #755. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 D.pseudoobscura:270

Q1E2S2              	100.00%		Q29E31              	100.00%
Bootstrap support for Q1E2S2 as seed ortholog is 100%.
Bootstrap support for Q29E31 as seed ortholog is 100%.

Group of orthologs #756. Best score 269 bits
Score difference with first non-orthologous sequence - C.immitis:269 D.pseudoobscura:269

J3KFT5              	100.00%		Q294L6              	100.00%
Bootstrap support for J3KFT5 as seed ortholog is 100%.
Bootstrap support for Q294L6 as seed ortholog is 100%.

Group of orthologs #757. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 D.pseudoobscura:268

J3KCN1              	100.00%		Q29LR4              	100.00%
                    	       		B5DIU2              	54.50%
                    	       		B5DL11              	28.49%
Bootstrap support for J3KCN1 as seed ortholog is 100%.
Bootstrap support for Q29LR4 as seed ortholog is 100%.

Group of orthologs #758. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 D.pseudoobscura:268

I9NP76              	100.00%		Q29BL7              	100.00%
                    	       		I5APK4              	15.08%
Bootstrap support for I9NP76 as seed ortholog is 100%.
Bootstrap support for Q29BL7 as seed ortholog is 100%.

Group of orthologs #759. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 D.pseudoobscura:268

J0HHZ5              	100.00%		Q29P66              	100.00%
Bootstrap support for J0HHZ5 as seed ortholog is 100%.
Bootstrap support for Q29P66 as seed ortholog is 100%.

Group of orthologs #760. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3K152              	100.00%		Q27928              	100.00%
                    	       		Q291Z0              	28.26%
Bootstrap support for J3K152 as seed ortholog is 100%.
Bootstrap support for Q27928 as seed ortholog is 100%.

Group of orthologs #761. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:216

J3KCK1              	100.00%		B5DVA8              	100.00%
Bootstrap support for J3KCK1 as seed ortholog is 100%.
Bootstrap support for B5DVA8 as seed ortholog is 100%.

Group of orthologs #762. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3KHC6              	100.00%		Q293Q0              	100.00%
Bootstrap support for J3KHC6 as seed ortholog is 100%.
Bootstrap support for Q293Q0 as seed ortholog is 100%.

Group of orthologs #763. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:60

J3K9W6              	100.00%		Q29E44              	100.00%
Bootstrap support for J3K9W6 as seed ortholog is 100%.
Bootstrap support for Q29E44 as seed ortholog is 81%.

Group of orthologs #764. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3KH13              	100.00%		Q297I7              	100.00%
Bootstrap support for J3KH13 as seed ortholog is 100%.
Bootstrap support for Q297I7 as seed ortholog is 100%.

Group of orthologs #765. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:116

J3K515              	100.00%		Q29NI0              	100.00%
Bootstrap support for J3K515 as seed ortholog is 100%.
Bootstrap support for Q29NI0 as seed ortholog is 99%.

Group of orthologs #766. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3KEX0              	100.00%		Q29FD5              	100.00%
Bootstrap support for J3KEX0 as seed ortholog is 100%.
Bootstrap support for Q29FD5 as seed ortholog is 100%.

Group of orthologs #767. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3KDV1              	100.00%		Q29GW7              	100.00%
Bootstrap support for J3KDV1 as seed ortholog is 100%.
Bootstrap support for Q29GW7 as seed ortholog is 100%.

Group of orthologs #768. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3K953              	100.00%		Q29LW9              	100.00%
Bootstrap support for J3K953 as seed ortholog is 100%.
Bootstrap support for Q29LW9 as seed ortholog is 100%.

Group of orthologs #769. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

Q1DHE1              	100.00%		Q29GA0              	100.00%
Bootstrap support for Q1DHE1 as seed ortholog is 100%.
Bootstrap support for Q29GA0 as seed ortholog is 100%.

Group of orthologs #770. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3KHY6              	100.00%		Q2LYS5              	100.00%
Bootstrap support for J3KHY6 as seed ortholog is 100%.
Bootstrap support for Q2LYS5 as seed ortholog is 100%.

Group of orthologs #771. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 D.pseudoobscura:267

J3KH61              	100.00%		Q2M039              	100.00%
Bootstrap support for J3KH61 as seed ortholog is 100%.
Bootstrap support for Q2M039 as seed ortholog is 100%.

Group of orthologs #772. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:111 D.pseudoobscura:266

J3KM66              	100.00%		Q29H89              	100.00%
                    	       		Q29NJ9              	14.96%
                    	       		B5DYS6              	14.46%
                    	       		B5DQR8              	13.84%
                    	       		Q29AD1              	10.63%
Bootstrap support for J3KM66 as seed ortholog is 95%.
Bootstrap support for Q29H89 as seed ortholog is 100%.

Group of orthologs #773. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:205 D.pseudoobscura:266

J3K5C1              	100.00%		B5DZB4              	100.00%
Bootstrap support for J3K5C1 as seed ortholog is 99%.
Bootstrap support for B5DZB4 as seed ortholog is 100%.

Group of orthologs #774. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:72

J3KD83              	100.00%		Q28XA0              	100.00%
Bootstrap support for J3KD83 as seed ortholog is 95%.
Bootstrap support for Q28XA0 as seed ortholog is 94%.

Group of orthologs #775. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:266 D.pseudoobscura:100

J3KCK6              	100.00%		Q28ZN7              	100.00%
Bootstrap support for J3KCK6 as seed ortholog is 100%.
Bootstrap support for Q28ZN7 as seed ortholog is 99%.

Group of orthologs #776. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:221 D.pseudoobscura:170

Q1E4I8              	100.00%		Q290A8              	100.00%
Bootstrap support for Q1E4I8 as seed ortholog is 100%.
Bootstrap support for Q290A8 as seed ortholog is 100%.

Group of orthologs #777. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:266 D.pseudoobscura:266

J3K7T3              	100.00%		Q29NR1              	100.00%
Bootstrap support for J3K7T3 as seed ortholog is 100%.
Bootstrap support for Q29NR1 as seed ortholog is 100%.

Group of orthologs #778. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:172

J3KHA5              	100.00%		Q29IC0              	100.00%
Bootstrap support for J3KHA5 as seed ortholog is 92%.
Bootstrap support for Q29IC0 as seed ortholog is 100%.

Group of orthologs #779. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:265

J3KIC6              	100.00%		B5DWW5              	100.00%
                    	       		Q29GH0              	39.01%
                    	       		Q293D3              	23.84%
                    	       		Q297B6              	9.60%
Bootstrap support for J3KIC6 as seed ortholog is 99%.
Bootstrap support for B5DWW5 as seed ortholog is 100%.

Group of orthologs #780. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 D.pseudoobscura:265

J3K1B1              	100.00%		B5DJP1              	100.00%
Bootstrap support for J3K1B1 as seed ortholog is 100%.
Bootstrap support for B5DJP1 as seed ortholog is 100%.

Group of orthologs #781. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 D.pseudoobscura:265

J3KEJ7              	100.00%		B5DWQ1              	100.00%
Bootstrap support for J3KEJ7 as seed ortholog is 100%.
Bootstrap support for B5DWQ1 as seed ortholog is 100%.

Group of orthologs #782. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:27 D.pseudoobscura:265

J3KAZ1              	100.00%		Q28YL3              	100.00%
Bootstrap support for J3KAZ1 as seed ortholog is 77%.
Bootstrap support for Q28YL3 as seed ortholog is 100%.

Group of orthologs #783. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 D.pseudoobscura:265

J3K7U3              	100.00%		Q297T4              	100.00%
Bootstrap support for J3K7U3 as seed ortholog is 100%.
Bootstrap support for Q297T4 as seed ortholog is 100%.

Group of orthologs #784. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 D.pseudoobscura:3

J3KFL5              	100.00%		Q28XI5              	100.00%
Bootstrap support for J3KFL5 as seed ortholog is 100%.
Bootstrap support for Q28XI5 as seed ortholog is 50%.
Alternative seed ortholog is B5DK44 (3 bits away from this cluster)

Group of orthologs #785. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 D.pseudoobscura:265

J3KII1              	100.00%		Q292H2              	100.00%
Bootstrap support for J3KII1 as seed ortholog is 100%.
Bootstrap support for Q292H2 as seed ortholog is 100%.

Group of orthologs #786. Best score 264 bits
Score difference with first non-orthologous sequence - C.immitis:264 D.pseudoobscura:220

J3K070              	100.00%		Q29L17              	100.00%
Bootstrap support for J3K070 as seed ortholog is 100%.
Bootstrap support for Q29L17 as seed ortholog is 100%.

Group of orthologs #787. Best score 264 bits
Score difference with first non-orthologous sequence - C.immitis:264 D.pseudoobscura:264

J3KCZ0              	100.00%		Q296Q6              	100.00%
Bootstrap support for J3KCZ0 as seed ortholog is 100%.
Bootstrap support for Q296Q6 as seed ortholog is 100%.

Group of orthologs #788. Best score 264 bits
Score difference with first non-orthologous sequence - C.immitis:264 D.pseudoobscura:108

J3KIA4              	100.00%		Q291H3              	100.00%
Bootstrap support for J3KIA4 as seed ortholog is 100%.
Bootstrap support for Q291H3 as seed ortholog is 97%.

Group of orthologs #789. Best score 264 bits
Score difference with first non-orthologous sequence - C.immitis:264 D.pseudoobscura:163

J3K4T0              	100.00%		Q29JK0              	100.00%
Bootstrap support for J3K4T0 as seed ortholog is 100%.
Bootstrap support for Q29JK0 as seed ortholog is 99%.

Group of orthologs #790. Best score 264 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:100

J3KDD3              	100.00%		Q29BG1              	100.00%
Bootstrap support for J3KDD3 as seed ortholog is 76%.
Bootstrap support for Q29BG1 as seed ortholog is 99%.

Group of orthologs #791. Best score 263 bits
Score difference with first non-orthologous sequence - C.immitis:263 D.pseudoobscura:263

J3K6V8              	100.00%		Q2LYS2              	100.00%
Bootstrap support for J3K6V8 as seed ortholog is 100%.
Bootstrap support for Q2LYS2 as seed ortholog is 100%.

Group of orthologs #792. Best score 263 bits
Score difference with first non-orthologous sequence - C.immitis:263 D.pseudoobscura:263

J3KAP9              	100.00%		Q29NS9              	100.00%
Bootstrap support for J3KAP9 as seed ortholog is 100%.
Bootstrap support for Q29NS9 as seed ortholog is 100%.

Group of orthologs #793. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 D.pseudoobscura:262

J3K8C0              	100.00%		B5DUJ0              	100.00%
                    	       		Q294T5              	100.00%
Bootstrap support for J3K8C0 as seed ortholog is 100%.
Bootstrap support for B5DUJ0 as seed ortholog is 100%.
Bootstrap support for Q294T5 as seed ortholog is 100%.

Group of orthologs #794. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 D.pseudoobscura:262

J3KE78              	100.00%		B5DND3              	100.00%
Bootstrap support for J3KE78 as seed ortholog is 100%.
Bootstrap support for B5DND3 as seed ortholog is 100%.

Group of orthologs #795. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 D.pseudoobscura:262

J3KEM5              	100.00%		Q29KS9              	100.00%
Bootstrap support for J3KEM5 as seed ortholog is 100%.
Bootstrap support for Q29KS9 as seed ortholog is 100%.

Group of orthologs #796. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 D.pseudoobscura:261

J3K0V6              	100.00%		Q28Y69              	100.00%
Bootstrap support for J3K0V6 as seed ortholog is 100%.
Bootstrap support for Q28Y69 as seed ortholog is 100%.

Group of orthologs #797. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 D.pseudoobscura:261

J3K1A8              	100.00%		Q292P4              	100.00%
Bootstrap support for J3K1A8 as seed ortholog is 100%.
Bootstrap support for Q292P4 as seed ortholog is 100%.

Group of orthologs #798. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:260

J3K1K2              	100.00%		Q290X7              	100.00%
Bootstrap support for J3K1K2 as seed ortholog is 84%.
Bootstrap support for Q290X7 as seed ortholog is 100%.

Group of orthologs #799. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:69

J3K8I6              	100.00%		Q290H4              	100.00%
Bootstrap support for J3K8I6 as seed ortholog is 99%.
Bootstrap support for Q290H4 as seed ortholog is 95%.

Group of orthologs #800. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:260 D.pseudoobscura:260

J3K0R9              	100.00%		Q29E27              	100.00%
Bootstrap support for J3K0R9 as seed ortholog is 100%.
Bootstrap support for Q29E27 as seed ortholog is 100%.

Group of orthologs #801. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:47

J3KLP2              	100.00%		B5DZG9              	100.00%
Bootstrap support for J3KLP2 as seed ortholog is 100%.
Bootstrap support for B5DZG9 as seed ortholog is 99%.

Group of orthologs #802. Best score 258 bits
Score difference with first non-orthologous sequence - C.immitis:258 D.pseudoobscura:74

J3KIN8              	100.00%		Q28XK4              	100.00%
                    	       		Q291Z9              	25.80%
Bootstrap support for J3KIN8 as seed ortholog is 100%.
Bootstrap support for Q28XK4 as seed ortholog is 99%.

Group of orthologs #803. Best score 258 bits
Score difference with first non-orthologous sequence - C.immitis:258 D.pseudoobscura:258

J3K9R2              	100.00%		B5DNH4              	100.00%
Bootstrap support for J3K9R2 as seed ortholog is 100%.
Bootstrap support for B5DNH4 as seed ortholog is 100%.

Group of orthologs #804. Best score 258 bits
Score difference with first non-orthologous sequence - C.immitis:258 D.pseudoobscura:258

J3K1C9              	100.00%		Q29P53              	100.00%
Bootstrap support for J3K1C9 as seed ortholog is 100%.
Bootstrap support for Q29P53 as seed ortholog is 100%.

Group of orthologs #805. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 D.pseudoobscura:257

J3K5Q7              	100.00%		Q29G36              	100.00%
                    	       		B5DQ06              	36.02%
Bootstrap support for J3K5Q7 as seed ortholog is 100%.
Bootstrap support for Q29G36 as seed ortholog is 100%.

Group of orthologs #806. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 D.pseudoobscura:82

J3K595              	100.00%		Q29DZ8              	100.00%
Bootstrap support for J3K595 as seed ortholog is 100%.
Bootstrap support for Q29DZ8 as seed ortholog is 98%.

Group of orthologs #807. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:162

J0HHI0              	100.00%		Q29LZ7              	100.00%
Bootstrap support for J0HHI0 as seed ortholog is 100%.
Bootstrap support for Q29LZ7 as seed ortholog is 99%.

Group of orthologs #808. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 D.pseudoobscura:257

J3KJ52              	100.00%		Q292P6              	100.00%
Bootstrap support for J3KJ52 as seed ortholog is 100%.
Bootstrap support for Q292P6 as seed ortholog is 100%.

Group of orthologs #809. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 D.pseudoobscura:257

Q1E9L2              	100.00%		Q297S2              	100.00%
Bootstrap support for Q1E9L2 as seed ortholog is 100%.
Bootstrap support for Q297S2 as seed ortholog is 100%.

Group of orthologs #810. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 D.pseudoobscura:257

J3KHE0              	100.00%		Q2M0L9              	100.00%
Bootstrap support for J3KHE0 as seed ortholog is 100%.
Bootstrap support for Q2M0L9 as seed ortholog is 100%.

Group of orthologs #811. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 D.pseudoobscura:256

J3K2N9              	100.00%		Q28ZJ3              	100.00%
Bootstrap support for J3K2N9 as seed ortholog is 100%.
Bootstrap support for Q28ZJ3 as seed ortholog is 100%.

Group of orthologs #812. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 D.pseudoobscura:256

I9NMG4              	100.00%		Q2M0L5              	100.00%
Bootstrap support for I9NMG4 as seed ortholog is 100%.
Bootstrap support for Q2M0L5 as seed ortholog is 100%.

Group of orthologs #813. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 D.pseudoobscura:256

J0HHS0              	100.00%		Q29NT3              	100.00%
Bootstrap support for J0HHS0 as seed ortholog is 100%.
Bootstrap support for Q29NT3 as seed ortholog is 100%.

Group of orthologs #814. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 D.pseudoobscura:256

Q1DTL7              	100.00%		Q29CU2              	100.00%
Bootstrap support for Q1DTL7 as seed ortholog is 100%.
Bootstrap support for Q29CU2 as seed ortholog is 100%.

Group of orthologs #815. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3KCI3              	100.00%		Q2LZW7              	100.00%
                    	       		Q29K73              	21.96%
                    	       		Q2M0V1              	14.81%
Bootstrap support for J3KCI3 as seed ortholog is 100%.
Bootstrap support for Q2LZW7 as seed ortholog is 100%.

Group of orthologs #816. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:157 D.pseudoobscura:255

J3KH60              	100.00%		Q291S3              	100.00%
I9NSK9              	8.96%		
Bootstrap support for J3KH60 as seed ortholog is 99%.
Bootstrap support for Q291S3 as seed ortholog is 100%.

Group of orthologs #817. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3KJZ7              	100.00%		Q28ZC5              	100.00%
                    	       		Q28ZC4              	28.51%
Bootstrap support for J3KJZ7 as seed ortholog is 100%.
Bootstrap support for Q28ZC5 as seed ortholog is 100%.

Group of orthologs #818. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3K7U1              	100.00%		B5DVW2              	100.00%
Bootstrap support for J3K7U1 as seed ortholog is 100%.
Bootstrap support for B5DVW2 as seed ortholog is 100%.

Group of orthologs #819. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3K1F5              	100.00%		Q290Y3              	100.00%
Bootstrap support for J3K1F5 as seed ortholog is 100%.
Bootstrap support for Q290Y3 as seed ortholog is 100%.

Group of orthologs #820. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:111 D.pseudoobscura:88

Q1EBK0              	100.00%		B5DRF0              	100.00%
Bootstrap support for Q1EBK0 as seed ortholog is 99%.
Bootstrap support for B5DRF0 as seed ortholog is 98%.

Group of orthologs #821. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3KBN9              	100.00%		Q29A77              	100.00%
Bootstrap support for J3KBN9 as seed ortholog is 100%.
Bootstrap support for Q29A77 as seed ortholog is 100%.

Group of orthologs #822. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:130

J3KG18              	100.00%		Q29B24              	100.00%
Bootstrap support for J3KG18 as seed ortholog is 100%.
Bootstrap support for Q29B24 as seed ortholog is 99%.

Group of orthologs #823. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3KIV6              	100.00%		Q29GW0              	100.00%
Bootstrap support for J3KIV6 as seed ortholog is 100%.
Bootstrap support for Q29GW0 as seed ortholog is 100%.

Group of orthologs #824. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 D.pseudoobscura:255

J3KM19              	100.00%		Q2LZ15              	100.00%
Bootstrap support for J3KM19 as seed ortholog is 100%.
Bootstrap support for Q2LZ15 as seed ortholog is 100%.

Group of orthologs #825. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:254 D.pseudoobscura:254

J0HEF0              	100.00%		Q295W1              	100.00%
Bootstrap support for J0HEF0 as seed ortholog is 100%.
Bootstrap support for Q295W1 as seed ortholog is 100%.

Group of orthologs #826. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:254 D.pseudoobscura:254

J3KM29              	100.00%		Q28YI7              	100.00%
Bootstrap support for J3KM29 as seed ortholog is 100%.
Bootstrap support for Q28YI7 as seed ortholog is 100%.

Group of orthologs #827. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:253

J3KIC7              	100.00%		Q298C7              	100.00%
Bootstrap support for J3KIC7 as seed ortholog is 99%.
Bootstrap support for Q298C7 as seed ortholog is 100%.

Group of orthologs #828. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 D.pseudoobscura:253

J3KCK8              	100.00%		Q29HV5              	100.00%
Bootstrap support for J3KCK8 as seed ortholog is 100%.
Bootstrap support for Q29HV5 as seed ortholog is 100%.

Group of orthologs #829. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:252

J3K0F7              	100.00%		B5DUR4              	100.00%
Bootstrap support for J3K0F7 as seed ortholog is 100%.
Bootstrap support for B5DUR4 as seed ortholog is 100%.

Group of orthologs #830. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:252

J3K5E6              	100.00%		Q28XI3              	100.00%
Bootstrap support for J3K5E6 as seed ortholog is 100%.
Bootstrap support for Q28XI3 as seed ortholog is 100%.

Group of orthologs #831. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:138

J3KH54              	100.00%		Q29BC6              	100.00%
Bootstrap support for J3KH54 as seed ortholog is 100%.
Bootstrap support for Q29BC6 as seed ortholog is 99%.

Group of orthologs #832. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:252

J3KAQ9              	100.00%		Q29L74              	100.00%
Bootstrap support for J3KAQ9 as seed ortholog is 100%.
Bootstrap support for Q29L74 as seed ortholog is 100%.

Group of orthologs #833. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 D.pseudoobscura:252

J3KLH8              	100.00%		Q29NI9              	100.00%
Bootstrap support for J3KLH8 as seed ortholog is 100%.
Bootstrap support for Q29NI9 as seed ortholog is 100%.

Group of orthologs #834. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:251 D.pseudoobscura:251

J3K2F1              	100.00%		Q291R2              	100.00%
Bootstrap support for J3K2F1 as seed ortholog is 100%.
Bootstrap support for Q291R2 as seed ortholog is 100%.

Group of orthologs #835. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:251 D.pseudoobscura:251

J3KGL6              	100.00%		Q29JI1              	100.00%
Bootstrap support for J3KGL6 as seed ortholog is 100%.
Bootstrap support for Q29JI1 as seed ortholog is 100%.

Group of orthologs #836. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:251 D.pseudoobscura:251

Q1DQZ5              	100.00%		Q29IG6              	100.00%
Bootstrap support for Q1DQZ5 as seed ortholog is 100%.
Bootstrap support for Q29IG6 as seed ortholog is 100%.

Group of orthologs #837. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 D.pseudoobscura:250

J3KDI7              	100.00%		B5DJT8              	100.00%
Bootstrap support for J3KDI7 as seed ortholog is 100%.
Bootstrap support for B5DJT8 as seed ortholog is 100%.

Group of orthologs #838. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 D.pseudoobscura:250

J3KC78              	100.00%		Q28X88              	100.00%
Bootstrap support for J3KC78 as seed ortholog is 100%.
Bootstrap support for Q28X88 as seed ortholog is 100%.

Group of orthologs #839. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 D.pseudoobscura:250

J3KBL0              	100.00%		Q29D51              	100.00%
Bootstrap support for J3KBL0 as seed ortholog is 100%.
Bootstrap support for Q29D51 as seed ortholog is 100%.

Group of orthologs #840. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 D.pseudoobscura:147

J3KED9              	100.00%		Q29G37              	100.00%
Bootstrap support for J3KED9 as seed ortholog is 100%.
Bootstrap support for Q29G37 as seed ortholog is 99%.

Group of orthologs #841. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 D.pseudoobscura:250

J3KED6              	100.00%		Q29L21              	100.00%
Bootstrap support for J3KED6 as seed ortholog is 100%.
Bootstrap support for Q29L21 as seed ortholog is 100%.

Group of orthologs #842. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:249 D.pseudoobscura:249

J0HF00              	100.00%		Q29NI8              	100.00%
                    	       		B5DHI3              	59.20%
Bootstrap support for J0HF00 as seed ortholog is 100%.
Bootstrap support for Q29NI8 as seed ortholog is 100%.

Group of orthologs #843. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:249 D.pseudoobscura:249

J3K8Y4              	100.00%		B5E1M2              	100.00%
Bootstrap support for J3K8Y4 as seed ortholog is 100%.
Bootstrap support for B5E1M2 as seed ortholog is 100%.

Group of orthologs #844. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:249 D.pseudoobscura:249

J3KM23              	100.00%		Q296V4              	100.00%
Bootstrap support for J3KM23 as seed ortholog is 100%.
Bootstrap support for Q296V4 as seed ortholog is 100%.

Group of orthologs #845. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:249 D.pseudoobscura:249

J3KM68              	100.00%		Q29BY2              	100.00%
Bootstrap support for J3KM68 as seed ortholog is 100%.
Bootstrap support for Q29BY2 as seed ortholog is 100%.

Group of orthologs #846. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:1 D.pseudoobscura:99

I9XLZ7              	100.00%		Q29IS3              	100.00%
                    	       		Q29IS8              	24.67%
                    	       		Q29IS1              	23.82%
                    	       		Q29IS7              	22.40%
                    	       		B5DLA1              	21.83%
                    	       		Q297A4              	17.77%
                    	       		Q29IT0              	17.49%
                    	       		Q29IS9              	17.20%
                    	       		Q29IT1              	17.01%
                    	       		P18172              	16.64%
                    	       		Q29IT2              	16.07%
                    	       		Q29IS6              	12.00%
                    	       		Q29IS5              	11.91%
Bootstrap support for I9XLZ7 as seed ortholog is 51%.
Alternative seed ortholog is J3K0N1 (1 bits away from this cluster)
Bootstrap support for Q29IS3 as seed ortholog is 95%.

Group of orthologs #847. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:248 D.pseudoobscura:248

J3K7Z9              	100.00%		B5DQN8              	100.00%
J3KDS1              	46.12%		
Bootstrap support for J3K7Z9 as seed ortholog is 100%.
Bootstrap support for B5DQN8 as seed ortholog is 100%.

Group of orthologs #848. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:248 D.pseudoobscura:137

J3K0B4              	100.00%		Q294H4              	100.00%
Bootstrap support for J3K0B4 as seed ortholog is 100%.
Bootstrap support for Q294H4 as seed ortholog is 100%.

Group of orthologs #849. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:248 D.pseudoobscura:248

J3KGR7              	100.00%		Q297C2              	100.00%
Bootstrap support for J3KGR7 as seed ortholog is 100%.
Bootstrap support for Q297C2 as seed ortholog is 100%.

Group of orthologs #850. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:248 D.pseudoobscura:248

J3K3Z2              	100.00%		Q2LZ33              	100.00%
Bootstrap support for J3K3Z2 as seed ortholog is 100%.
Bootstrap support for Q2LZ33 as seed ortholog is 100%.

Group of orthologs #851. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 D.pseudoobscura:247

J3KET5              	100.00%		Q28ZZ6              	100.00%
Bootstrap support for J3KET5 as seed ortholog is 100%.
Bootstrap support for Q28ZZ6 as seed ortholog is 100%.

Group of orthologs #852. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 D.pseudoobscura:247

J3K4F4              	100.00%		Q29G67              	100.00%
Bootstrap support for J3K4F4 as seed ortholog is 100%.
Bootstrap support for Q29G67 as seed ortholog is 100%.

Group of orthologs #853. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 D.pseudoobscura:247

J3K7D2              	100.00%		Q29M45              	100.00%
Bootstrap support for J3K7D2 as seed ortholog is 100%.
Bootstrap support for Q29M45 as seed ortholog is 100%.

Group of orthologs #854. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 D.pseudoobscura:167

J3KGP0              	100.00%		Q2M0N1              	100.00%
Bootstrap support for J3KGP0 as seed ortholog is 100%.
Bootstrap support for Q2M0N1 as seed ortholog is 99%.

Group of orthologs #855. Best score 246 bits
Score difference with first non-orthologous sequence - C.immitis:246 D.pseudoobscura:246

J3KFB3              	100.00%		Q296G2              	100.00%
Bootstrap support for J3KFB3 as seed ortholog is 100%.
Bootstrap support for Q296G2 as seed ortholog is 100%.

Group of orthologs #856. Best score 246 bits
Score difference with first non-orthologous sequence - C.immitis:246 D.pseudoobscura:246

J3KG14              	100.00%		Q29FM7              	100.00%
Bootstrap support for J3KG14 as seed ortholog is 100%.
Bootstrap support for Q29FM7 as seed ortholog is 100%.

Group of orthologs #857. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 D.pseudoobscura:245

J3K2H6              	100.00%		Q28YY2              	100.00%
Bootstrap support for J3K2H6 as seed ortholog is 100%.
Bootstrap support for Q28YY2 as seed ortholog is 100%.

Group of orthologs #858. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 D.pseudoobscura:245

J3K3R6              	100.00%		Q295H9              	100.00%
Bootstrap support for J3K3R6 as seed ortholog is 100%.
Bootstrap support for Q295H9 as seed ortholog is 100%.

Group of orthologs #859. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:121

Q1E306              	100.00%		B5DQ82              	100.00%
Bootstrap support for Q1E306 as seed ortholog is 89%.
Bootstrap support for B5DQ82 as seed ortholog is 98%.

Group of orthologs #860. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 D.pseudoobscura:245

J3KAP3              	100.00%		Q290G0              	100.00%
Bootstrap support for J3KAP3 as seed ortholog is 100%.
Bootstrap support for Q290G0 as seed ortholog is 100%.

Group of orthologs #861. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 D.pseudoobscura:147

J0HGJ5              	100.00%		Q29NP1              	100.00%
Bootstrap support for J0HGJ5 as seed ortholog is 100%.
Bootstrap support for Q29NP1 as seed ortholog is 100%.

Group of orthologs #862. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 D.pseudoobscura:245

J3KI47              	100.00%		Q292L7              	100.00%
Bootstrap support for J3KI47 as seed ortholog is 100%.
Bootstrap support for Q292L7 as seed ortholog is 100%.

Group of orthologs #863. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:245

J3KKK7              	100.00%		Q290F1              	100.00%
Bootstrap support for J3KKK7 as seed ortholog is 99%.
Bootstrap support for Q290F1 as seed ortholog is 100%.

Group of orthologs #864. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:245

Q1E225              	100.00%		Q29L01              	100.00%
Bootstrap support for Q1E225 as seed ortholog is 100%.
Bootstrap support for Q29L01 as seed ortholog is 100%.

Group of orthologs #865. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 D.pseudoobscura:245

J3KII4              	100.00%		Q2M0L4              	100.00%
Bootstrap support for J3KII4 as seed ortholog is 100%.
Bootstrap support for Q2M0L4 as seed ortholog is 100%.

Group of orthologs #866. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:136 D.pseudoobscura:37

J3K6A7              	100.00%		B5DPR3              	100.00%
                    	       		B5DN66              	17.75%
Bootstrap support for J3K6A7 as seed ortholog is 100%.
Bootstrap support for B5DPR3 as seed ortholog is 97%.

Group of orthologs #867. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:138

J3K428              	100.00%		Q29KK4              	100.00%
Bootstrap support for J3K428 as seed ortholog is 98%.
Bootstrap support for Q29KK4 as seed ortholog is 99%.

Group of orthologs #868. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:244 D.pseudoobscura:244

J3KHG9              	100.00%		Q299H0              	100.00%
Bootstrap support for J3KHG9 as seed ortholog is 100%.
Bootstrap support for Q299H0 as seed ortholog is 100%.

Group of orthologs #869. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:2 D.pseudoobscura:87

J3KKJ8              	100.00%		Q29CP9              	100.00%
Bootstrap support for J3KKJ8 as seed ortholog is 54%.
Alternative seed ortholog is J3KED3 (2 bits away from this cluster)
Bootstrap support for Q29CP9 as seed ortholog is 98%.

Group of orthologs #870. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:244 D.pseudoobscura:244

J3KET7              	100.00%		Q2M0U8              	100.00%
Bootstrap support for J3KET7 as seed ortholog is 100%.
Bootstrap support for Q2M0U8 as seed ortholog is 100%.

Group of orthologs #871. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 D.pseudoobscura:32

J3KA64              	100.00%		Q29DS5              	100.00%
J3KJC6              	50.16%		Q29N19              	19.11%
                    	       		Q29N20              	18.62%
                    	       		Q28XV5              	14.66%
                    	       		Q29NC3              	5.11%
Bootstrap support for J3KA64 as seed ortholog is 100%.
Bootstrap support for Q29DS5 as seed ortholog is 76%.

Group of orthologs #872. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:243

J3K669              	100.00%		B5E0E2              	100.00%
Bootstrap support for J3K669 as seed ortholog is 100%.
Bootstrap support for B5E0E2 as seed ortholog is 100%.

Group of orthologs #873. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:6 D.pseudoobscura:242

J3KDS0              	100.00%		Q2LZ65              	100.00%
                    	       		Q2LZ66              	28.19%
Bootstrap support for J3KDS0 as seed ortholog is 54%.
Alternative seed ortholog is J0HHD8 (6 bits away from this cluster)
Bootstrap support for Q2LZ65 as seed ortholog is 100%.

Group of orthologs #874. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 D.pseudoobscura:242

J3K5F5              	100.00%		Q299Q5              	100.00%
Bootstrap support for J3K5F5 as seed ortholog is 100%.
Bootstrap support for Q299Q5 as seed ortholog is 100%.

Group of orthologs #875. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 D.pseudoobscura:242

J3K7H7              	100.00%		Q29HH8              	100.00%
Bootstrap support for J3K7H7 as seed ortholog is 100%.
Bootstrap support for Q29HH8 as seed ortholog is 100%.

Group of orthologs #876. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 D.pseudoobscura:242

J3K9Y1              	100.00%		Q29KR0              	100.00%
Bootstrap support for J3K9Y1 as seed ortholog is 100%.
Bootstrap support for Q29KR0 as seed ortholog is 100%.

Group of orthologs #877. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:241 D.pseudoobscura:192

J3KDP9              	100.00%		B5DKT4              	100.00%
                    	       		B5DKT3              	91.07%
                    	       		B5DRY2              	71.43%
                    	       		B5DJ85              	37.50%
Bootstrap support for J3KDP9 as seed ortholog is 100%.
Bootstrap support for B5DKT4 as seed ortholog is 100%.

Group of orthologs #878. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:241 D.pseudoobscura:241

Q1E6Q3              	100.00%		Q291S1              	100.00%
Bootstrap support for Q1E6Q3 as seed ortholog is 100%.
Bootstrap support for Q291S1 as seed ortholog is 100%.

Group of orthologs #879. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:241 D.pseudoobscura:241

J3KJ94              	100.00%		Q29E23              	100.00%
Bootstrap support for J3KJ94 as seed ortholog is 100%.
Bootstrap support for Q29E23 as seed ortholog is 100%.

Group of orthologs #880. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 D.pseudoobscura:44

J3KDX5              	100.00%		Q29NN6              	100.00%
                    	       		Q29NQ1              	100.00%
                    	       		Q29NF1              	24.26%
                    	       		B5DJM6              	23.65%
                    	       		Q29KX3              	17.91%
                    	       		Q29LQ0              	17.39%
                    	       		Q29NQ2              	15.34%
                    	       		B5DJM5              	14.87%
                    	       		Q2LZ69              	13.30%
Bootstrap support for J3KDX5 as seed ortholog is 100%.
Bootstrap support for Q29NN6 as seed ortholog is 82%.
Bootstrap support for Q29NQ1 as seed ortholog is 83%.

Group of orthologs #881. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 D.pseudoobscura:240

J3KGZ2              	100.00%		B5DPH9              	100.00%
Bootstrap support for J3KGZ2 as seed ortholog is 100%.
Bootstrap support for B5DPH9 as seed ortholog is 100%.

Group of orthologs #882. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 D.pseudoobscura:240

J3KAC3              	100.00%		Q28ZI6              	100.00%
Bootstrap support for J3KAC3 as seed ortholog is 100%.
Bootstrap support for Q28ZI6 as seed ortholog is 100%.

Group of orthologs #883. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 D.pseudoobscura:240

J3KF61              	100.00%		Q29C61              	100.00%
Bootstrap support for J3KF61 as seed ortholog is 100%.
Bootstrap support for Q29C61 as seed ortholog is 100%.

Group of orthologs #884. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:140

J3KK62              	100.00%		Q29AF9              	100.00%
Bootstrap support for J3KK62 as seed ortholog is 99%.
Bootstrap support for Q29AF9 as seed ortholog is 99%.

Group of orthologs #885. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:240

Q1DKE7              	100.00%		Q29FM5              	100.00%
Bootstrap support for Q1DKE7 as seed ortholog is 99%.
Bootstrap support for Q29FM5 as seed ortholog is 100%.

Group of orthologs #886. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 D.pseudoobscura:239

J3KCM0              	100.00%		Q297M7              	100.00%
                    	       		B5DUE5              	9.83%
Bootstrap support for J3KCM0 as seed ortholog is 100%.
Bootstrap support for Q297M7 as seed ortholog is 100%.

Group of orthologs #887. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 D.pseudoobscura:239

J3KDF9              	100.00%		Q298Z1              	100.00%
                    	       		B5DPB9              	6.28%
Bootstrap support for J3KDF9 as seed ortholog is 100%.
Bootstrap support for Q298Z1 as seed ortholog is 100%.

Group of orthologs #888. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 D.pseudoobscura:133

I9NRN9              	100.00%		Q298N7              	100.00%
Bootstrap support for I9NRN9 as seed ortholog is 100%.
Bootstrap support for Q298N7 as seed ortholog is 100%.

Group of orthologs #889. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:239

J3KL80              	100.00%		B5DS14              	100.00%
Bootstrap support for J3KL80 as seed ortholog is 99%.
Bootstrap support for B5DS14 as seed ortholog is 100%.

Group of orthologs #890. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:56

J3KIW3              	100.00%		Q295G1              	100.00%
Bootstrap support for J3KIW3 as seed ortholog is 99%.
Bootstrap support for Q295G1 as seed ortholog is 93%.

Group of orthologs #891. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 D.pseudoobscura:239

J3KL90              	100.00%		Q291U5              	100.00%
Bootstrap support for J3KL90 as seed ortholog is 100%.
Bootstrap support for Q291U5 as seed ortholog is 100%.

Group of orthologs #892. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 D.pseudoobscura:238

J3K7P9              	100.00%		Q299W5              	100.00%
                    	       		B5DUQ5              	78.41%
Bootstrap support for J3K7P9 as seed ortholog is 100%.
Bootstrap support for Q299W5 as seed ortholog is 100%.

Group of orthologs #893. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 D.pseudoobscura:238

J0HH32              	100.00%		Q29GR6              	100.00%
Bootstrap support for J0HH32 as seed ortholog is 100%.
Bootstrap support for Q29GR6 as seed ortholog is 100%.

Group of orthologs #894. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:140 D.pseudoobscura:103

J3K7A7              	100.00%		Q29FF4              	100.00%
Bootstrap support for J3K7A7 as seed ortholog is 100%.
Bootstrap support for Q29FF4 as seed ortholog is 100%.

Group of orthologs #895. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 D.pseudoobscura:238

J3K882              	100.00%		Q29EV9              	100.00%
Bootstrap support for J3K882 as seed ortholog is 100%.
Bootstrap support for Q29EV9 as seed ortholog is 100%.

Group of orthologs #896. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:155

J3KC05              	100.00%		Q29BK3              	100.00%
Bootstrap support for J3KC05 as seed ortholog is 96%.
Bootstrap support for Q29BK3 as seed ortholog is 99%.

Group of orthologs #897. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:164 D.pseudoobscura:87

J3KK35              	100.00%		Q2LYY5              	100.00%
Bootstrap support for J3KK35 as seed ortholog is 99%.
Bootstrap support for Q2LYY5 as seed ortholog is 98%.

Group of orthologs #898. Best score 237 bits
Score difference with first non-orthologous sequence - C.immitis:237 D.pseudoobscura:237

J0HFV4              	100.00%		B5DYE1              	100.00%
Bootstrap support for J0HFV4 as seed ortholog is 100%.
Bootstrap support for B5DYE1 as seed ortholog is 100%.

Group of orthologs #899. Best score 237 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:109

J0HEY2              	100.00%		Q29H12              	100.00%
Bootstrap support for J0HEY2 as seed ortholog is 100%.
Bootstrap support for Q29H12 as seed ortholog is 100%.

Group of orthologs #900. Best score 237 bits
Score difference with first non-orthologous sequence - C.immitis:237 D.pseudoobscura:237

J3KBZ4              	100.00%		Q29F49              	100.00%
Bootstrap support for J3KBZ4 as seed ortholog is 100%.
Bootstrap support for Q29F49 as seed ortholog is 100%.

Group of orthologs #901. Best score 237 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:112

J3K7C8              	100.00%		Q29NI2              	100.00%
Bootstrap support for J3K7C8 as seed ortholog is 99%.
Bootstrap support for Q29NI2 as seed ortholog is 99%.

Group of orthologs #902. Best score 236 bits
Score difference with first non-orthologous sequence - C.immitis:236 D.pseudoobscura:236

J3KAS2              	100.00%		Q29FR6              	100.00%
                    	       		Q29F24              	71.88%
Bootstrap support for J3KAS2 as seed ortholog is 100%.
Bootstrap support for Q29FR6 as seed ortholog is 100%.

Group of orthologs #903. Best score 236 bits
Score difference with first non-orthologous sequence - C.immitis:236 D.pseudoobscura:236

J3KDL1              	100.00%		B5DPM6              	100.00%
Bootstrap support for J3KDL1 as seed ortholog is 100%.
Bootstrap support for B5DPM6 as seed ortholog is 100%.

Group of orthologs #904. Best score 236 bits
Score difference with first non-orthologous sequence - C.immitis:236 D.pseudoobscura:236

J3KEM0              	100.00%		Q28YL5              	100.00%
Bootstrap support for J3KEM0 as seed ortholog is 100%.
Bootstrap support for Q28YL5 as seed ortholog is 100%.

Group of orthologs #905. Best score 236 bits
Score difference with first non-orthologous sequence - C.immitis:236 D.pseudoobscura:236

J3KLA3              	100.00%		Q29A91              	100.00%
Bootstrap support for J3KLA3 as seed ortholog is 100%.
Bootstrap support for Q29A91 as seed ortholog is 100%.

Group of orthologs #906. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:107

J3K5M4              	100.00%		B5E1J0              	100.00%
Bootstrap support for J3K5M4 as seed ortholog is 99%.
Bootstrap support for B5E1J0 as seed ortholog is 98%.

Group of orthologs #907. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 D.pseudoobscura:235

J3KAG5              	100.00%		B5DX75              	100.00%
Bootstrap support for J3KAG5 as seed ortholog is 100%.
Bootstrap support for B5DX75 as seed ortholog is 100%.

Group of orthologs #908. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 D.pseudoobscura:235

J3K9E6              	100.00%		I5ANY8              	100.00%
Bootstrap support for J3K9E6 as seed ortholog is 100%.
Bootstrap support for I5ANY8 as seed ortholog is 100%.

Group of orthologs #909. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:158 D.pseudoobscura:156

J3KFM8              	100.00%		B5DYN3              	100.00%
Bootstrap support for J3KFM8 as seed ortholog is 100%.
Bootstrap support for B5DYN3 as seed ortholog is 100%.

Group of orthologs #910. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 D.pseudoobscura:235

J3KDZ2              	100.00%		Q29NX1              	100.00%
Bootstrap support for J3KDZ2 as seed ortholog is 100%.
Bootstrap support for Q29NX1 as seed ortholog is 100%.

Group of orthologs #911. Best score 234 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:21

J0HHR6              	100.00%		Q28XM2              	100.00%
Bootstrap support for J0HHR6 as seed ortholog is 99%.
Bootstrap support for Q28XM2 as seed ortholog is 82%.

Group of orthologs #912. Best score 234 bits
Score difference with first non-orthologous sequence - C.immitis:234 D.pseudoobscura:234

J3K1Z0              	100.00%		Q29LJ5              	100.00%
Bootstrap support for J3K1Z0 as seed ortholog is 100%.
Bootstrap support for Q29LJ5 as seed ortholog is 100%.

Group of orthologs #913. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 D.pseudoobscura:233

J3K0N5              	100.00%		B5DRI8              	100.00%
Bootstrap support for J3K0N5 as seed ortholog is 100%.
Bootstrap support for B5DRI8 as seed ortholog is 100%.

Group of orthologs #914. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 D.pseudoobscura:190

J3K7X7              	100.00%		Q293F7              	100.00%
Bootstrap support for J3K7X7 as seed ortholog is 100%.
Bootstrap support for Q293F7 as seed ortholog is 99%.

Group of orthologs #915. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:103

J3KAF8              	100.00%		Q295Z5              	100.00%
Bootstrap support for J3KAF8 as seed ortholog is 100%.
Bootstrap support for Q295Z5 as seed ortholog is 100%.

Group of orthologs #916. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 D.pseudoobscura:233

J3KM14              	100.00%		Q29HM2              	100.00%
Bootstrap support for J3KM14 as seed ortholog is 100%.
Bootstrap support for Q29HM2 as seed ortholog is 100%.

Group of orthologs #917. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:146 D.pseudoobscura:76

J3KFH7              	100.00%		Q29A20              	100.00%
                    	       		Q298B8              	29.09%
                    	       		Q290Y0              	15.76%
Bootstrap support for J3KFH7 as seed ortholog is 99%.
Bootstrap support for Q29A20 as seed ortholog is 98%.

Group of orthologs #918. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 D.pseudoobscura:232

J3K4U1              	100.00%		Q28XI0              	100.00%
Bootstrap support for J3K4U1 as seed ortholog is 100%.
Bootstrap support for Q28XI0 as seed ortholog is 100%.

Group of orthologs #919. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 D.pseudoobscura:232

J3KM71              	100.00%		B5DWV9              	100.00%
Bootstrap support for J3KM71 as seed ortholog is 100%.
Bootstrap support for B5DWV9 as seed ortholog is 100%.

Group of orthologs #920. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 D.pseudoobscura:232

J3K7C7              	100.00%		Q29PP8              	100.00%
Bootstrap support for J3K7C7 as seed ortholog is 100%.
Bootstrap support for Q29PP8 as seed ortholog is 100%.

Group of orthologs #921. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 D.pseudoobscura:232

J3KJ92              	100.00%		Q29GG8              	100.00%
Bootstrap support for J3KJ92 as seed ortholog is 100%.
Bootstrap support for Q29GG8 as seed ortholog is 100%.

Group of orthologs #922. Best score 231 bits
Score difference with first non-orthologous sequence - C.immitis:231 D.pseudoobscura:231

J3K6I9              	100.00%		Q296W6              	100.00%
Bootstrap support for J3K6I9 as seed ortholog is 100%.
Bootstrap support for Q296W6 as seed ortholog is 100%.

Group of orthologs #923. Best score 231 bits
Score difference with first non-orthologous sequence - C.immitis:231 D.pseudoobscura:231

J3K6V0              	100.00%		Q29D36              	100.00%
Bootstrap support for J3K6V0 as seed ortholog is 100%.
Bootstrap support for Q29D36 as seed ortholog is 100%.

Group of orthologs #924. Best score 231 bits
Score difference with first non-orthologous sequence - C.immitis:231 D.pseudoobscura:231

J3KEH9              	100.00%		Q29N88              	100.00%
Bootstrap support for J3KEH9 as seed ortholog is 100%.
Bootstrap support for Q29N88 as seed ortholog is 100%.

Group of orthologs #925. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:131

J3KAG8              	100.00%		B5DK47              	100.00%
                    	       		Q29P34              	42.19%
Bootstrap support for J3KAG8 as seed ortholog is 89%.
Bootstrap support for B5DK47 as seed ortholog is 99%.

Group of orthologs #926. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 D.pseudoobscura:230

J3K4N2              	100.00%		B5DVN7              	100.00%
                    	       		Q295C7              	30.67%
Bootstrap support for J3K4N2 as seed ortholog is 100%.
Bootstrap support for B5DVN7 as seed ortholog is 100%.

Group of orthologs #927. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 D.pseudoobscura:105

J3K2I4              	100.00%		Q28YM9              	100.00%
                    	       		Q29FR0              	70.29%
Bootstrap support for J3K2I4 as seed ortholog is 100%.
Bootstrap support for Q28YM9 as seed ortholog is 99%.

Group of orthologs #928. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 D.pseudoobscura:230

J3KHN7              	100.00%		B5DJ23              	100.00%
Bootstrap support for J3KHN7 as seed ortholog is 100%.
Bootstrap support for B5DJ23 as seed ortholog is 100%.

Group of orthologs #929. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 D.pseudoobscura:230

J3KIZ3              	100.00%		Q28YS3              	100.00%
Bootstrap support for J3KIZ3 as seed ortholog is 100%.
Bootstrap support for Q28YS3 as seed ortholog is 100%.

Group of orthologs #930. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:8

J3KHJ6              	100.00%		Q295X7              	100.00%
Bootstrap support for J3KHJ6 as seed ortholog is 99%.
Bootstrap support for Q295X7 as seed ortholog is 65%.
Alternative seed ortholog is Q29D83 (8 bits away from this cluster)

Group of orthologs #931. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 D.pseudoobscura:157

J3K6X3              	100.00%		Q29JK5              	100.00%
Bootstrap support for J3K6X3 as seed ortholog is 100%.
Bootstrap support for Q29JK5 as seed ortholog is 99%.

Group of orthologs #932. Best score 229 bits
Score difference with first non-orthologous sequence - C.immitis:229 D.pseudoobscura:155

J3KF04              	100.00%		Q29A78              	100.00%
Bootstrap support for J3KF04 as seed ortholog is 100%.
Bootstrap support for Q29A78 as seed ortholog is 99%.

Group of orthologs #933. Best score 229 bits
Score difference with first non-orthologous sequence - C.immitis:229 D.pseudoobscura:229

J3K8L0              	100.00%		Q29MN6              	100.00%
Bootstrap support for J3K8L0 as seed ortholog is 100%.
Bootstrap support for Q29MN6 as seed ortholog is 100%.

Group of orthologs #934. Best score 229 bits
Score difference with first non-orthologous sequence - C.immitis:229 D.pseudoobscura:82

J3KMD6              	100.00%		Q29KI2              	100.00%
Bootstrap support for J3KMD6 as seed ortholog is 100%.
Bootstrap support for Q29KI2 as seed ortholog is 99%.

Group of orthologs #935. Best score 229 bits
Score difference with first non-orthologous sequence - C.immitis:148 D.pseudoobscura:229

Q1DN93              	100.00%		Q2LYW8              	100.00%
Bootstrap support for Q1DN93 as seed ortholog is 99%.
Bootstrap support for Q2LYW8 as seed ortholog is 100%.

Group of orthologs #936. Best score 228 bits
Score difference with first non-orthologous sequence - C.immitis:228 D.pseudoobscura:228

J3K3G4              	100.00%		Q28XH3              	100.00%
Bootstrap support for J3K3G4 as seed ortholog is 100%.
Bootstrap support for Q28XH3 as seed ortholog is 100%.

Group of orthologs #937. Best score 228 bits
Score difference with first non-orthologous sequence - C.immitis:228 D.pseudoobscura:75

J3KA14              	100.00%		B5E0J9              	100.00%
Bootstrap support for J3KA14 as seed ortholog is 100%.
Bootstrap support for B5E0J9 as seed ortholog is 99%.

Group of orthologs #938. Best score 228 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:41

J3K425              	100.00%		Q29J32              	100.00%
Bootstrap support for J3K425 as seed ortholog is 92%.
Bootstrap support for Q29J32 as seed ortholog is 86%.

Group of orthologs #939. Best score 228 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:105

J3K5N9              	100.00%		Q29KW7              	100.00%
Bootstrap support for J3K5N9 as seed ortholog is 99%.
Bootstrap support for Q29KW7 as seed ortholog is 94%.

Group of orthologs #940. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

J3K2Q3              	100.00%		Q28ZS2              	100.00%
J3KGD4              	100.00%		B5E155              	100.00%
Bootstrap support for J3K2Q3 as seed ortholog is 100%.
Bootstrap support for J3KGD4 as seed ortholog is 100%.
Bootstrap support for Q28ZS2 as seed ortholog is 100%.
Bootstrap support for B5E155 as seed ortholog is 100%.

Group of orthologs #941. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

J0HIC7              	100.00%		Q2M0G4              	100.00%
                    	       		B5DU09              	21.33%
Bootstrap support for J0HIC7 as seed ortholog is 100%.
Bootstrap support for Q2M0G4 as seed ortholog is 100%.

Group of orthologs #942. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

J0HE87              	100.00%		Q298Q9              	100.00%
Bootstrap support for J0HE87 as seed ortholog is 100%.
Bootstrap support for Q298Q9 as seed ortholog is 100%.

Group of orthologs #943. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

I9NPH1              	100.00%		Q29DM2              	100.00%
Bootstrap support for I9NPH1 as seed ortholog is 100%.
Bootstrap support for Q29DM2 as seed ortholog is 100%.

Group of orthologs #944. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

J3K7F0              	100.00%		Q299H1              	100.00%
Bootstrap support for J3K7F0 as seed ortholog is 100%.
Bootstrap support for Q299H1 as seed ortholog is 100%.

Group of orthologs #945. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

J3K9X8              	100.00%		Q29D87              	100.00%
Bootstrap support for J3K9X8 as seed ortholog is 100%.
Bootstrap support for Q29D87 as seed ortholog is 100%.

Group of orthologs #946. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 D.pseudoobscura:227

J3K6A2              	100.00%		Q29ND5              	100.00%
Bootstrap support for J3K6A2 as seed ortholog is 100%.
Bootstrap support for Q29ND5 as seed ortholog is 100%.

Group of orthologs #947. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:155

J3KLV4              	100.00%		Q296V5              	100.00%
Bootstrap support for J3KLV4 as seed ortholog is 99%.
Bootstrap support for Q296V5 as seed ortholog is 99%.

Group of orthologs #948. Best score 226 bits
Score difference with first non-orthologous sequence - C.immitis:226 D.pseudoobscura:226

J3K8A2              	100.00%		Q2LZ30              	100.00%
Bootstrap support for J3K8A2 as seed ortholog is 100%.
Bootstrap support for Q2LZ30 as seed ortholog is 100%.

Group of orthologs #949. Best score 226 bits
Score difference with first non-orthologous sequence - C.immitis:226 D.pseudoobscura:226

J3K888              	100.00%		Q2M0V0              	100.00%
Bootstrap support for J3K888 as seed ortholog is 100%.
Bootstrap support for Q2M0V0 as seed ortholog is 100%.

Group of orthologs #950. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:180

J3K8T1              	100.00%		Q29B22              	100.00%
                    	       		Q29BH1              	15.97%
Bootstrap support for J3K8T1 as seed ortholog is 99%.
Bootstrap support for Q29B22 as seed ortholog is 100%.

Group of orthologs #951. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:225 D.pseudoobscura:225

J3KM21              	100.00%		Q2LYR4              	100.00%
                    	       		Q28ZG3              	8.38%
Bootstrap support for J3KM21 as seed ortholog is 100%.
Bootstrap support for Q2LYR4 as seed ortholog is 100%.

Group of orthologs #952. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:225 D.pseudoobscura:44

J3KBA1              	100.00%		Q298G2              	100.00%
Bootstrap support for J3KBA1 as seed ortholog is 100%.
Bootstrap support for Q298G2 as seed ortholog is 98%.

Group of orthologs #953. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:167 D.pseudoobscura:166

J3K2W5              	100.00%		Q29JW7              	100.00%
Bootstrap support for J3K2W5 as seed ortholog is 100%.
Bootstrap support for Q29JW7 as seed ortholog is 100%.

Group of orthologs #954. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:225 D.pseudoobscura:99

J3K6G9              	100.00%		Q29IB2              	100.00%
Bootstrap support for J3K6G9 as seed ortholog is 100%.
Bootstrap support for Q29IB2 as seed ortholog is 98%.

Group of orthologs #955. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:225 D.pseudoobscura:225

J3KBH8              	100.00%		Q29DG3              	100.00%
Bootstrap support for J3KBH8 as seed ortholog is 100%.
Bootstrap support for Q29DG3 as seed ortholog is 100%.

Group of orthologs #956. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 D.pseudoobscura:224

J3KB89              	100.00%		Q29B31              	100.00%
J3KI82              	12.13%		
Bootstrap support for J3KB89 as seed ortholog is 100%.
Bootstrap support for Q29B31 as seed ortholog is 100%.

Group of orthologs #957. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 D.pseudoobscura:224

J3K783              	100.00%		Q296K1              	100.00%
Bootstrap support for J3K783 as seed ortholog is 100%.
Bootstrap support for Q296K1 as seed ortholog is 100%.

Group of orthologs #958. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 D.pseudoobscura:224

J3K9M0              	100.00%		Q294H1              	100.00%
Bootstrap support for J3K9M0 as seed ortholog is 100%.
Bootstrap support for Q294H1 as seed ortholog is 100%.

Group of orthologs #959. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:135

J3K709              	100.00%		Q29FJ6              	100.00%
Bootstrap support for J3K709 as seed ortholog is 100%.
Bootstrap support for Q29FJ6 as seed ortholog is 100%.

Group of orthologs #960. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 D.pseudoobscura:224

J3KIE8              	100.00%		Q29HA5              	100.00%
Bootstrap support for J3KIE8 as seed ortholog is 100%.
Bootstrap support for Q29HA5 as seed ortholog is 100%.

Group of orthologs #961. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:121

J3K362              	100.00%		Q29J67              	100.00%
J3K1L2              	23.59%		B5DLC2              	6.94%
Bootstrap support for J3K362 as seed ortholog is 98%.
Bootstrap support for Q29J67 as seed ortholog is 99%.

Group of orthologs #962. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:122

J3KD93              	100.00%		Q29N51              	100.00%
                    	       		B5DI15              	57.02%
Bootstrap support for J3KD93 as seed ortholog is 100%.
Bootstrap support for Q29N51 as seed ortholog is 100%.

Group of orthologs #963. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 D.pseudoobscura:223

J3K1W5              	100.00%		B5DWM0              	100.00%
Bootstrap support for J3K1W5 as seed ortholog is 100%.
Bootstrap support for B5DWM0 as seed ortholog is 100%.

Group of orthologs #964. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 D.pseudoobscura:223

J3KLJ3              	100.00%		B5DPF1              	100.00%
Bootstrap support for J3KLJ3 as seed ortholog is 100%.
Bootstrap support for B5DPF1 as seed ortholog is 100%.

Group of orthologs #965. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:34 D.pseudoobscura:77

I9NQQ9              	100.00%		Q29MK6              	100.00%
Bootstrap support for I9NQQ9 as seed ortholog is 85%.
Bootstrap support for Q29MK6 as seed ortholog is 99%.

Group of orthologs #966. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 D.pseudoobscura:223

J3K652              	100.00%		Q29E37              	100.00%
Bootstrap support for J3K652 as seed ortholog is 100%.
Bootstrap support for Q29E37 as seed ortholog is 100%.

Group of orthologs #967. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 D.pseudoobscura:223

J3K5T4              	100.00%		Q29HE6              	100.00%
Bootstrap support for J3K5T4 as seed ortholog is 100%.
Bootstrap support for Q29HE6 as seed ortholog is 100%.

Group of orthologs #968. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:77

J3KAJ2              	100.00%		Q29DT5              	100.00%
Bootstrap support for J3KAJ2 as seed ortholog is 81%.
Bootstrap support for Q29DT5 as seed ortholog is 91%.

Group of orthologs #969. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 D.pseudoobscura:223

J3KI04              	100.00%		Q29BR9              	100.00%
Bootstrap support for J3KI04 as seed ortholog is 100%.
Bootstrap support for Q29BR9 as seed ortholog is 100%.

Group of orthologs #970. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:165

J0HI55              	100.00%		Q28ZC8              	100.00%
Bootstrap support for J0HI55 as seed ortholog is 99%.
Bootstrap support for Q28ZC8 as seed ortholog is 99%.

Group of orthologs #971. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 D.pseudoobscura:222

J3KIY3              	100.00%		Q293T5              	100.00%
Bootstrap support for J3KIY3 as seed ortholog is 100%.
Bootstrap support for Q293T5 as seed ortholog is 100%.

Group of orthologs #972. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:99

J3K9A2              	100.00%		Q29I41              	100.00%
Bootstrap support for J3K9A2 as seed ortholog is 99%.
Bootstrap support for Q29I41 as seed ortholog is 99%.

Group of orthologs #973. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 D.pseudoobscura:222

J3KJ82              	100.00%		Q29I64              	100.00%
Bootstrap support for J3KJ82 as seed ortholog is 100%.
Bootstrap support for Q29I64 as seed ortholog is 100%.

Group of orthologs #974. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 D.pseudoobscura:222

Q1E8Q5              	100.00%		Q29M95              	100.00%
Bootstrap support for Q1E8Q5 as seed ortholog is 100%.
Bootstrap support for Q29M95 as seed ortholog is 100%.

Group of orthologs #975. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:220 D.pseudoobscura:88

J3K3R2              	100.00%		B5E188              	100.00%
Bootstrap support for J3K3R2 as seed ortholog is 100%.
Bootstrap support for B5E188 as seed ortholog is 99%.

Group of orthologs #976. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:220 D.pseudoobscura:107

I9NPR6              	100.00%		Q296Z4              	100.00%
Bootstrap support for I9NPR6 as seed ortholog is 100%.
Bootstrap support for Q296Z4 as seed ortholog is 99%.

Group of orthologs #977. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:164 D.pseudoobscura:220

J3KE45              	100.00%		Q28X51              	100.00%
Bootstrap support for J3KE45 as seed ortholog is 100%.
Bootstrap support for Q28X51 as seed ortholog is 100%.

Group of orthologs #978. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:220 D.pseudoobscura:16

J3KDP0              	100.00%		Q29D91              	100.00%
Bootstrap support for J3KDP0 as seed ortholog is 100%.
Bootstrap support for Q29D91 as seed ortholog is 74%.
Alternative seed ortholog is Q29CQ9 (16 bits away from this cluster)

Group of orthologs #979. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:48

J3K9H2              	100.00%		Q2M061              	100.00%
Bootstrap support for J3K9H2 as seed ortholog is 94%.
Bootstrap support for Q2M061 as seed ortholog is 98%.

Group of orthologs #980. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 D.pseudoobscura:219

Q1DKJ3              	100.00%		Q29FJ3              	100.00%
                    	       		Q29KM9              	14.31%
Bootstrap support for Q1DKJ3 as seed ortholog is 100%.
Bootstrap support for Q29FJ3 as seed ortholog is 100%.

Group of orthologs #981. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 D.pseudoobscura:219

J3K143              	100.00%		Q295N7              	100.00%
Bootstrap support for J3K143 as seed ortholog is 100%.
Bootstrap support for Q295N7 as seed ortholog is 100%.

Group of orthologs #982. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 D.pseudoobscura:219

J3K4E9              	100.00%		Q29CJ4              	100.00%
Bootstrap support for J3K4E9 as seed ortholog is 100%.
Bootstrap support for Q29CJ4 as seed ortholog is 100%.

Group of orthologs #983. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 D.pseudoobscura:219

J3K3D2              	100.00%		Q29I16              	100.00%
Bootstrap support for J3K3D2 as seed ortholog is 100%.
Bootstrap support for Q29I16 as seed ortholog is 100%.

Group of orthologs #984. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 D.pseudoobscura:219

J3KL12              	100.00%		Q295U7              	100.00%
Bootstrap support for J3KL12 as seed ortholog is 100%.
Bootstrap support for Q295U7 as seed ortholog is 100%.

Group of orthologs #985. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 D.pseudoobscura:218

J3KH80              	100.00%		B5E1F8              	100.00%
                    	       		Q28ZQ9              	33.85%
Bootstrap support for J3KH80 as seed ortholog is 100%.
Bootstrap support for B5E1F8 as seed ortholog is 100%.

Group of orthologs #986. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 D.pseudoobscura:218

J3KDK4              	100.00%		Q29DK4              	100.00%
                    	       		B5DYB0              	41.54%
Bootstrap support for J3KDK4 as seed ortholog is 100%.
Bootstrap support for Q29DK4 as seed ortholog is 100%.

Group of orthologs #987. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 D.pseudoobscura:218

J3K0P9              	100.00%		Q291V1              	100.00%
Bootstrap support for J3K0P9 as seed ortholog is 100%.
Bootstrap support for Q291V1 as seed ortholog is 100%.

Group of orthologs #988. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 D.pseudoobscura:218

J3K650              	100.00%		Q295D2              	100.00%
Bootstrap support for J3K650 as seed ortholog is 100%.
Bootstrap support for Q295D2 as seed ortholog is 100%.

Group of orthologs #989. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:33

J3KLD5              	100.00%		Q292Z8              	100.00%
Bootstrap support for J3KLD5 as seed ortholog is 98%.
Bootstrap support for Q292Z8 as seed ortholog is 90%.

Group of orthologs #990. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:147

J3K4A4              	100.00%		Q28X68              	100.00%
                    	       		B5DKA0              	13.03%
                    	       		B5DKA6              	12.61%
Bootstrap support for J3K4A4 as seed ortholog is 100%.
Bootstrap support for Q28X68 as seed ortholog is 100%.

Group of orthologs #991. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:217

J3K079              	100.00%		Q29DS4              	100.00%
                    	       		Q294L1              	71.24%
Bootstrap support for J3K079 as seed ortholog is 100%.
Bootstrap support for Q29DS4 as seed ortholog is 100%.

Group of orthologs #992. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:130

J3K9P7              	100.00%		Q28ZE2              	100.00%
Bootstrap support for J3K9P7 as seed ortholog is 99%.
Bootstrap support for Q28ZE2 as seed ortholog is 99%.

Group of orthologs #993. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:217

J3K944              	100.00%		Q29DF6              	100.00%
Bootstrap support for J3K944 as seed ortholog is 100%.
Bootstrap support for Q29DF6 as seed ortholog is 100%.

Group of orthologs #994. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:134

J3KM38              	100.00%		Q28XV6              	100.00%
Bootstrap support for J3KM38 as seed ortholog is 96%.
Bootstrap support for Q28XV6 as seed ortholog is 99%.

Group of orthologs #995. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:166 D.pseudoobscura:102

J3KIP1              	100.00%		Q299A4              	100.00%
Bootstrap support for J3KIP1 as seed ortholog is 100%.
Bootstrap support for Q299A4 as seed ortholog is 99%.

Group of orthologs #996. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:217

J3KBJ0              	100.00%		Q29I21              	100.00%
Bootstrap support for J3KBJ0 as seed ortholog is 100%.
Bootstrap support for Q29I21 as seed ortholog is 100%.

Group of orthologs #997. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:217

J3KFR9              	100.00%		Q29ME9              	100.00%
Bootstrap support for J3KFR9 as seed ortholog is 100%.
Bootstrap support for Q29ME9 as seed ortholog is 100%.

Group of orthologs #998. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 D.pseudoobscura:217

J3KK64              	100.00%		Q29I30              	100.00%
Bootstrap support for J3KK64 as seed ortholog is 100%.
Bootstrap support for Q29I30 as seed ortholog is 100%.

Group of orthologs #999. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 D.pseudoobscura:216

J3K0C5              	100.00%		Q28XA8              	100.00%
Bootstrap support for J3K0C5 as seed ortholog is 100%.
Bootstrap support for Q28XA8 as seed ortholog is 100%.

Group of orthologs #1000. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 D.pseudoobscura:216

J3K9Q7              	100.00%		B5DU68              	100.00%
Bootstrap support for J3K9Q7 as seed ortholog is 100%.
Bootstrap support for B5DU68 as seed ortholog is 100%.

Group of orthologs #1001. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 D.pseudoobscura:216

J3KC75              	100.00%		Q298K0              	100.00%
Bootstrap support for J3KC75 as seed ortholog is 100%.
Bootstrap support for Q298K0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 D.pseudoobscura:216

J3K266              	100.00%		Q29LY9              	100.00%
Bootstrap support for J3K266 as seed ortholog is 100%.
Bootstrap support for Q29LY9 as seed ortholog is 100%.

Group of orthologs #1003. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 D.pseudoobscura:216

J3KLJ8              	100.00%		Q2LYK8              	100.00%
Bootstrap support for J3KLJ8 as seed ortholog is 100%.
Bootstrap support for Q2LYK8 as seed ortholog is 100%.

Group of orthologs #1004. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:79

J3KEY6              	100.00%		Q29C81              	48.64%
J3KJ24              	100.00%		B5E0Y6              	100.00%
                    	       		Q29BI6              	18.31%
                    	       		Q29EE1              	15.17%
                    	       		Q29C55              	15.06%
                    	       		Q29CA3              	13.70%
                    	       		Q29A32              	10.67%
                    	       		Q293I4              	10.46%
Bootstrap support for J3KEY6 as seed ortholog is 98%.
Bootstrap support for J3KJ24 as seed ortholog is 98%.
Bootstrap support for B5E0Y6 as seed ortholog is 95%.

Group of orthologs #1005. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:66

J3K7M8              	100.00%		Q29E40              	100.00%
                    	       		Q29LG1              	42.01%
Bootstrap support for J3K7M8 as seed ortholog is 86%.
Bootstrap support for Q29E40 as seed ortholog is 95%.

Group of orthologs #1006. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:215 D.pseudoobscura:66

J0HFA7              	100.00%		Q29J88              	100.00%
Bootstrap support for J0HFA7 as seed ortholog is 100%.
Bootstrap support for Q29J88 as seed ortholog is 97%.

Group of orthologs #1007. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:214 D.pseudoobscura:214

J3K3H7              	100.00%		Q2M046              	100.00%
                    	       		B5DPP5              	27.46%
                    	       		B5DQE3              	23.79%
Bootstrap support for J3K3H7 as seed ortholog is 100%.
Bootstrap support for Q2M046 as seed ortholog is 100%.

Group of orthologs #1008. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:111 D.pseudoobscura:73

J3KAG4              	100.00%		B5DWZ6              	100.00%
Bootstrap support for J3KAG4 as seed ortholog is 99%.
Bootstrap support for B5DWZ6 as seed ortholog is 89%.

Group of orthologs #1009. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:214 D.pseudoobscura:214

J3K4Y4              	100.00%		Q293X3              	100.00%
Bootstrap support for J3K4Y4 as seed ortholog is 100%.
Bootstrap support for Q293X3 as seed ortholog is 100%.

Group of orthologs #1010. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:214 D.pseudoobscura:214

J3KB57              	100.00%		Q2M0V3              	100.00%
Bootstrap support for J3KB57 as seed ortholog is 100%.
Bootstrap support for Q2M0V3 as seed ortholog is 100%.

Group of orthologs #1011. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:9 D.pseudoobscura:213

J3K5A3              	100.00%		Q29PH5              	100.00%
                    	       		Q29CP8              	13.90%
                    	       		B5DMM9              	11.73%
                    	       		Q296X0              	7.78%
Bootstrap support for J3K5A3 as seed ortholog is 54%.
Alternative seed ortholog is J3KH83 (9 bits away from this cluster)
Bootstrap support for Q29PH5 as seed ortholog is 100%.

Group of orthologs #1012. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 D.pseudoobscura:213

J3K1M7              	100.00%		Q28Z21              	100.00%
Bootstrap support for J3K1M7 as seed ortholog is 100%.
Bootstrap support for Q28Z21 as seed ortholog is 100%.

Group of orthologs #1013. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:172 D.pseudoobscura:163

J3K2V0              	100.00%		Q29NY8              	100.00%
Bootstrap support for J3K2V0 as seed ortholog is 99%.
Bootstrap support for Q29NY8 as seed ortholog is 100%.

Group of orthologs #1014. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 D.pseudoobscura:213

J3KM55              	100.00%		Q29A02              	100.00%
Bootstrap support for J3KM55 as seed ortholog is 100%.
Bootstrap support for Q29A02 as seed ortholog is 100%.

Group of orthologs #1015. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 D.pseudoobscura:213

Q1DTI6              	100.00%		Q29C12              	100.00%
Bootstrap support for Q1DTI6 as seed ortholog is 100%.
Bootstrap support for Q29C12 as seed ortholog is 100%.

Group of orthologs #1016. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 D.pseudoobscura:213

J3KCV1              	100.00%		Q29MJ3              	100.00%
Bootstrap support for J3KCV1 as seed ortholog is 100%.
Bootstrap support for Q29MJ3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 212 bits
Score difference with first non-orthologous sequence - C.immitis:7 D.pseudoobscura:212

J3K0G2              	100.00%		Q28WX5              	100.00%
                    	       		B5DYR7              	43.48%
                    	       		B5DHG5              	20.65%
                    	       		B5DYR6              	9.78%
                    	       		Q290J9              	7.61%
Bootstrap support for J3K0G2 as seed ortholog is 64%.
Alternative seed ortholog is J3K9L7 (7 bits away from this cluster)
Bootstrap support for Q28WX5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:211 D.pseudoobscura:211

J3K6Z2              	100.00%		Q29NJ3              	100.00%
                    	       		B5DLE5              	31.39%
                    	       		B5DNK9              	23.57%
                    	       		B5DLQ7              	22.31%
                    	       		B5DLR2              	16.68%
Bootstrap support for J3K6Z2 as seed ortholog is 100%.
Bootstrap support for Q29NJ3 as seed ortholog is 100%.

Group of orthologs #1019. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:211 D.pseudoobscura:211

J3K1Q4              	100.00%		Q29CJ3              	100.00%
Bootstrap support for J3K1Q4 as seed ortholog is 100%.
Bootstrap support for Q29CJ3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:101

J3K8J0              	100.00%		Q292Q3              	100.00%
                    	       		Q29FN6              	9.64%
Bootstrap support for J3K8J0 as seed ortholog is 100%.
Bootstrap support for Q292Q3 as seed ortholog is 98%.

Group of orthologs #1021. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:210

J0HDS7              	100.00%		B5DRX3              	100.00%
Bootstrap support for J0HDS7 as seed ortholog is 100%.
Bootstrap support for B5DRX3 as seed ortholog is 100%.

Group of orthologs #1022. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:64

J0HDI7              	100.00%		Q29G35              	100.00%
Bootstrap support for J0HDI7 as seed ortholog is 100%.
Bootstrap support for Q29G35 as seed ortholog is 99%.

Group of orthologs #1023. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:91

J3KDA6              	100.00%		Q292W9              	100.00%
Bootstrap support for J3KDA6 as seed ortholog is 100%.
Bootstrap support for Q292W9 as seed ortholog is 99%.

Group of orthologs #1024. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:210

J3KGT0              	100.00%		Q29AN2              	100.00%
Bootstrap support for J3KGT0 as seed ortholog is 100%.
Bootstrap support for Q29AN2 as seed ortholog is 100%.

Group of orthologs #1025. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:210

J3K716              	100.00%		Q29NM4              	100.00%
Bootstrap support for J3K716 as seed ortholog is 100%.
Bootstrap support for Q29NM4 as seed ortholog is 100%.

Group of orthologs #1026. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:210

J3KDK7              	100.00%		Q29HG2              	100.00%
Bootstrap support for J3KDK7 as seed ortholog is 100%.
Bootstrap support for Q29HG2 as seed ortholog is 100%.

Group of orthologs #1027. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 D.pseudoobscura:210

J3KK39              	100.00%		Q29JC5              	100.00%
Bootstrap support for J3KK39 as seed ortholog is 100%.
Bootstrap support for Q29JC5 as seed ortholog is 100%.

Group of orthologs #1028. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 D.pseudoobscura:209

J3KA72              	100.00%		B5DSC1              	100.00%
Bootstrap support for J3KA72 as seed ortholog is 100%.
Bootstrap support for B5DSC1 as seed ortholog is 100%.

Group of orthologs #1029. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 D.pseudoobscura:209

J0HI33              	100.00%		Q290U0              	100.00%
Bootstrap support for J0HI33 as seed ortholog is 100%.
Bootstrap support for Q290U0 as seed ortholog is 100%.

Group of orthologs #1030. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 D.pseudoobscura:209

J3K1X4              	100.00%		Q294R9              	100.00%
Bootstrap support for J3K1X4 as seed ortholog is 100%.
Bootstrap support for Q294R9 as seed ortholog is 100%.

Group of orthologs #1031. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 D.pseudoobscura:209

J3KIZ9              	100.00%		B5DXL4              	100.00%
Bootstrap support for J3KIZ9 as seed ortholog is 100%.
Bootstrap support for B5DXL4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 D.pseudoobscura:209

J3KDP7              	100.00%		Q290H8              	100.00%
Bootstrap support for J3KDP7 as seed ortholog is 100%.
Bootstrap support for Q290H8 as seed ortholog is 100%.

Group of orthologs #1033. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 D.pseudoobscura:209

J3KMC0              	100.00%		Q29BX7              	100.00%
Bootstrap support for J3KMC0 as seed ortholog is 100%.
Bootstrap support for Q29BX7 as seed ortholog is 100%.

Group of orthologs #1034. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 D.pseudoobscura:208

Q1E0W9              	100.00%		Q29DE9              	100.00%
                    	       		B5DYA2              	48.61%
Bootstrap support for Q1E0W9 as seed ortholog is 100%.
Bootstrap support for Q29DE9 as seed ortholog is 100%.

Group of orthologs #1035. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 D.pseudoobscura:208

Q1E736              	100.00%		B5DK31              	100.00%
Bootstrap support for Q1E736 as seed ortholog is 100%.
Bootstrap support for B5DK31 as seed ortholog is 100%.

Group of orthologs #1036. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:208

J3KG26              	100.00%		Q291Y0              	100.00%
Bootstrap support for J3KG26 as seed ortholog is 90%.
Bootstrap support for Q291Y0 as seed ortholog is 100%.

Group of orthologs #1037. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 D.pseudoobscura:208

J3KFC9              	100.00%		Q299C2              	100.00%
Bootstrap support for J3KFC9 as seed ortholog is 100%.
Bootstrap support for Q299C2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 D.pseudoobscura:207

J3KCK3              	100.00%		B5DN49              	100.00%
J3KJG6              	100.00%		Q29GY1              	100.00%
J3KI27              	44.41%		Q295B3              	9.57%
J3K8W3              	23.90%		
J3K069              	18.17%		
Bootstrap support for J3KCK3 as seed ortholog is 100%.
Bootstrap support for J3KJG6 as seed ortholog is 100%.
Bootstrap support for B5DN49 as seed ortholog is 100%.
Bootstrap support for Q29GY1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:207

J3KGL7              	100.00%		Q296J4              	100.00%
                    	       		B5DXP5              	32.02%
Bootstrap support for J3KGL7 as seed ortholog is 100%.
Bootstrap support for Q296J4 as seed ortholog is 100%.

Group of orthologs #1040. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:207

J3KJT1              	100.00%		Q28WQ2              	100.00%
Bootstrap support for J3KJT1 as seed ortholog is 100%.
Bootstrap support for Q28WQ2 as seed ortholog is 100%.

Group of orthologs #1041. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 D.pseudoobscura:207

J3KJX9              	100.00%		Q295G6              	100.00%
Bootstrap support for J3KJX9 as seed ortholog is 100%.
Bootstrap support for Q295G6 as seed ortholog is 100%.

Group of orthologs #1042. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 D.pseudoobscura:207

J3KKZ9              	100.00%		Q296D9              	100.00%
Bootstrap support for J3KKZ9 as seed ortholog is 100%.
Bootstrap support for Q296D9 as seed ortholog is 100%.

Group of orthologs #1043. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 D.pseudoobscura:207

J3KH66              	100.00%		Q29JM3              	100.00%
Bootstrap support for J3KH66 as seed ortholog is 100%.
Bootstrap support for Q29JM3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:5 D.pseudoobscura:206

J3K1R0              	100.00%		Q29EZ1              	100.00%
                    	       		B5DPD4              	35.03%
                    	       		Q292Y3              	34.15%
                    	       		B5DPD5              	16.41%
                    	       		B5DSP9              	13.97%
Bootstrap support for J3K1R0 as seed ortholog is 54%.
Alternative seed ortholog is J0HHD8 (5 bits away from this cluster)
Bootstrap support for Q29EZ1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 D.pseudoobscura:206

J3K3D6              	100.00%		B5DQY7              	100.00%
Bootstrap support for J3K3D6 as seed ortholog is 100%.
Bootstrap support for B5DQY7 as seed ortholog is 100%.

Group of orthologs #1046. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 D.pseudoobscura:206

J3KH33              	100.00%		Q290T9              	100.00%
Bootstrap support for J3KH33 as seed ortholog is 100%.
Bootstrap support for Q290T9 as seed ortholog is 100%.

Group of orthologs #1047. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 D.pseudoobscura:206

Q1DNB9              	100.00%		I7LPX5              	100.00%
Bootstrap support for Q1DNB9 as seed ortholog is 100%.
Bootstrap support for I7LPX5 as seed ortholog is 100%.

Group of orthologs #1048. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 D.pseudoobscura:206

J3K8Q1              	100.00%		Q29GE9              	100.00%
Bootstrap support for J3K8Q1 as seed ortholog is 100%.
Bootstrap support for Q29GE9 as seed ortholog is 100%.

Group of orthologs #1049. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:157

Q1DR81              	100.00%		Q292E8              	100.00%
Bootstrap support for Q1DR81 as seed ortholog is 99%.
Bootstrap support for Q292E8 as seed ortholog is 99%.

Group of orthologs #1050. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:92 D.pseudoobscura:62

J3KJB3              	100.00%		Q29K23              	100.00%
Bootstrap support for J3KJB3 as seed ortholog is 99%.
Bootstrap support for Q29K23 as seed ortholog is 95%.

Group of orthologs #1051. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:205 D.pseudoobscura:56

I9NNT6              	100.00%		Q290T7              	100.00%
Bootstrap support for I9NNT6 as seed ortholog is 100%.
Bootstrap support for Q290T7 as seed ortholog is 89%.

Group of orthologs #1052. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:205 D.pseudoobscura:106

J3K3M5              	100.00%		Q29E07              	100.00%
Bootstrap support for J3K3M5 as seed ortholog is 100%.
Bootstrap support for Q29E07 as seed ortholog is 100%.

Group of orthologs #1053. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 D.pseudoobscura:93

I9XMB2              	100.00%		Q298L3              	100.00%
                    	       		B5DWJ8              	8.47%
                    	       		I5ANC8              	6.05%
Bootstrap support for I9XMB2 as seed ortholog is 100%.
Bootstrap support for Q298L3 as seed ortholog is 99%.

Group of orthologs #1054. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 D.pseudoobscura:204

J3K9Z4              	100.00%		Q28X16              	100.00%
Bootstrap support for J3K9Z4 as seed ortholog is 100%.
Bootstrap support for Q28X16 as seed ortholog is 100%.

Group of orthologs #1055. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 D.pseudoobscura:151

J3K0N4              	100.00%		Q29BU9              	100.00%
Bootstrap support for J3K0N4 as seed ortholog is 100%.
Bootstrap support for Q29BU9 as seed ortholog is 99%.

Group of orthologs #1056. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 D.pseudoobscura:204

J3KKM6              	100.00%		B5DYG6              	100.00%
Bootstrap support for J3KKM6 as seed ortholog is 100%.
Bootstrap support for B5DYG6 as seed ortholog is 100%.

Group of orthologs #1057. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 D.pseudoobscura:204

J3KDI3              	100.00%		Q298G6              	100.00%
Bootstrap support for J3KDI3 as seed ortholog is 100%.
Bootstrap support for Q298G6 as seed ortholog is 100%.

Group of orthologs #1058. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:72

I9NKL8              	100.00%		Q29GB9              	100.00%
                    	       		B5DZB3              	75.00%
Bootstrap support for I9NKL8 as seed ortholog is 100%.
Bootstrap support for Q29GB9 as seed ortholog is 99%.

Group of orthologs #1059. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3KC67              	100.00%		B5DLV7              	100.00%
Bootstrap support for J3KC67 as seed ortholog is 100%.
Bootstrap support for B5DLV7 as seed ortholog is 100%.

Group of orthologs #1060. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3K8J7              	100.00%		B5DYK6              	100.00%
Bootstrap support for J3K8J7 as seed ortholog is 100%.
Bootstrap support for B5DYK6 as seed ortholog is 100%.

Group of orthologs #1061. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:14 D.pseudoobscura:203

J3KJR7              	100.00%		B5DX68              	100.00%
Bootstrap support for J3KJR7 as seed ortholog is 60%.
Alternative seed ortholog is J3KK13 (14 bits away from this cluster)
Bootstrap support for B5DX68 as seed ortholog is 100%.

Group of orthologs #1062. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:148

J3K1Q6              	100.00%		Q29JF3              	100.00%
Bootstrap support for J3K1Q6 as seed ortholog is 100%.
Bootstrap support for Q29JF3 as seed ortholog is 99%.

Group of orthologs #1063. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3KD40              	100.00%		Q298G1              	100.00%
Bootstrap support for J3KD40 as seed ortholog is 100%.
Bootstrap support for Q298G1 as seed ortholog is 100%.

Group of orthologs #1064. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3K8J2              	100.00%		Q29L15              	100.00%
Bootstrap support for J3K8J2 as seed ortholog is 100%.
Bootstrap support for Q29L15 as seed ortholog is 100%.

Group of orthologs #1065. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3KAU6              	100.00%		Q29IR2              	100.00%
Bootstrap support for J3KAU6 as seed ortholog is 100%.
Bootstrap support for Q29IR2 as seed ortholog is 100%.

Group of orthologs #1066. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3KK59              	100.00%		Q29CQ2              	100.00%
Bootstrap support for J3KK59 as seed ortholog is 100%.
Bootstrap support for Q29CQ2 as seed ortholog is 100%.

Group of orthologs #1067. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 D.pseudoobscura:203

J3KJQ8              	100.00%		Q29J99              	100.00%
Bootstrap support for J3KJQ8 as seed ortholog is 100%.
Bootstrap support for Q29J99 as seed ortholog is 100%.

Group of orthologs #1068. Best score 202 bits
Score difference with first non-orthologous sequence - C.immitis:202 D.pseudoobscura:202

J3K420              	100.00%		B5E0G7              	100.00%
                    	       		Q290Q1              	75.05%
                    	       		Q292F8              	70.10%
Bootstrap support for J3K420 as seed ortholog is 100%.
Bootstrap support for B5E0G7 as seed ortholog is 100%.

Group of orthologs #1069. Best score 202 bits
Score difference with first non-orthologous sequence - C.immitis:202 D.pseudoobscura:202

J3KEU4              	100.00%		Q298M8              	100.00%
Bootstrap support for J3KEU4 as seed ortholog is 100%.
Bootstrap support for Q298M8 as seed ortholog is 100%.

Group of orthologs #1070. Best score 202 bits
Score difference with first non-orthologous sequence - C.immitis:202 D.pseudoobscura:202

J3KJA5              	100.00%		Q293C7              	100.00%
Bootstrap support for J3KJA5 as seed ortholog is 100%.
Bootstrap support for Q293C7 as seed ortholog is 100%.

Group of orthologs #1071. Best score 202 bits
Score difference with first non-orthologous sequence - C.immitis:202 D.pseudoobscura:202

J3KB14              	100.00%		Q29IM3              	100.00%
Bootstrap support for J3KB14 as seed ortholog is 100%.
Bootstrap support for Q29IM3 as seed ortholog is 100%.

Group of orthologs #1072. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:201

J3K1M1              	100.00%		B5DH86              	100.00%
                    	       		Q29CJ7              	100.00%
Bootstrap support for J3K1M1 as seed ortholog is 100%.
Bootstrap support for B5DH86 as seed ortholog is 100%.
Bootstrap support for Q29CJ7 as seed ortholog is 100%.

Group of orthologs #1073. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:201

J3KA47              	100.00%		Q29BE7              	100.00%
                    	       		B5DY61              	8.63%
Bootstrap support for J3KA47 as seed ortholog is 100%.
Bootstrap support for Q29BE7 as seed ortholog is 100%.

Group of orthologs #1074. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:201

I9NRL8              	100.00%		B5DVI6              	100.00%
Bootstrap support for I9NRL8 as seed ortholog is 100%.
Bootstrap support for B5DVI6 as seed ortholog is 100%.

Group of orthologs #1075. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:201

J3K7P1              	100.00%		Q29I74              	100.00%
Bootstrap support for J3K7P1 as seed ortholog is 100%.
Bootstrap support for Q29I74 as seed ortholog is 100%.

Group of orthologs #1076. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:201

J3KEP9              	100.00%		Q29F66              	100.00%
Bootstrap support for J3KEP9 as seed ortholog is 100%.
Bootstrap support for Q29F66 as seed ortholog is 100%.

Group of orthologs #1077. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 D.pseudoobscura:201

J3KHG1              	100.00%		Q29HV4              	100.00%
Bootstrap support for J3KHG1 as seed ortholog is 100%.
Bootstrap support for Q29HV4 as seed ortholog is 100%.

Group of orthologs #1078. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:92

J3KJ72              	100.00%		Q293T6              	100.00%
                    	       		Q297I1              	100.00%
                    	       		B5DUI0              	62.08%
Bootstrap support for J3KJ72 as seed ortholog is 99%.
Bootstrap support for Q293T6 as seed ortholog is 99%.
Bootstrap support for Q297I1 as seed ortholog is 98%.

Group of orthologs #1079. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:69

J3KJ14              	100.00%		Q29EA7              	100.00%
                    	       		Q29BV6              	40.65%
Bootstrap support for J3KJ14 as seed ortholog is 99%.
Bootstrap support for Q29EA7 as seed ortholog is 97%.

Group of orthologs #1080. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 D.pseudoobscura:200

J3KCJ6              	100.00%		B5DK37              	100.00%
Bootstrap support for J3KCJ6 as seed ortholog is 100%.
Bootstrap support for B5DK37 as seed ortholog is 100%.

Group of orthologs #1081. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 D.pseudoobscura:200

J3KGH1              	100.00%		B5DIQ2              	100.00%
Bootstrap support for J3KGH1 as seed ortholog is 100%.
Bootstrap support for B5DIQ2 as seed ortholog is 100%.

Group of orthologs #1082. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:200

I9NLD9              	100.00%		Q29MV0              	100.00%
Bootstrap support for I9NLD9 as seed ortholog is 94%.
Bootstrap support for Q29MV0 as seed ortholog is 100%.

Group of orthologs #1083. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 D.pseudoobscura:200

J3KDN5              	100.00%		Q296L6              	100.00%
Bootstrap support for J3KDN5 as seed ortholog is 100%.
Bootstrap support for Q296L6 as seed ortholog is 100%.

Group of orthologs #1084. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:200

J3K339              	100.00%		Q2LZA8              	100.00%
Bootstrap support for J3K339 as seed ortholog is 99%.
Bootstrap support for Q2LZA8 as seed ortholog is 100%.

Group of orthologs #1085. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 D.pseudoobscura:200

J3KK49              	100.00%		Q29BN5              	100.00%
Bootstrap support for J3KK49 as seed ortholog is 100%.
Bootstrap support for Q29BN5 as seed ortholog is 100%.

Group of orthologs #1086. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 D.pseudoobscura:199

J3KFW4              	100.00%		Q29GI1              	100.00%
                    	       		Q293K1              	17.88%
                    	       		Q29GW2              	10.27%
Bootstrap support for J3KFW4 as seed ortholog is 100%.
Bootstrap support for Q29GI1 as seed ortholog is 100%.

Group of orthologs #1087. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 D.pseudoobscura:199

J3K3K7              	100.00%		Q294H3              	100.00%
Bootstrap support for J3K3K7 as seed ortholog is 100%.
Bootstrap support for Q294H3 as seed ortholog is 100%.

Group of orthologs #1088. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 D.pseudoobscura:199

J3KEU7              	100.00%		Q29AN8              	100.00%
Bootstrap support for J3KEU7 as seed ortholog is 100%.
Bootstrap support for Q29AN8 as seed ortholog is 100%.

Group of orthologs #1089. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 D.pseudoobscura:199

J3KK48              	100.00%		Q29DC3              	100.00%
Bootstrap support for J3KK48 as seed ortholog is 100%.
Bootstrap support for Q29DC3 as seed ortholog is 100%.

Group of orthologs #1090. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:56

J0HHF8              	100.00%		Q28ZA4              	100.00%
                    	       		B5DMB8              	56.91%
Bootstrap support for J0HHF8 as seed ortholog is 93%.
Bootstrap support for Q28ZA4 as seed ortholog is 97%.

Group of orthologs #1091. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 D.pseudoobscura:25

J3K892              	100.00%		B5DKH1              	100.00%
Bootstrap support for J3K892 as seed ortholog is 100%.
Bootstrap support for B5DKH1 as seed ortholog is 92%.

Group of orthologs #1092. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 D.pseudoobscura:198

J3K0C1              	100.00%		Q28XR8              	100.00%
Bootstrap support for J3K0C1 as seed ortholog is 100%.
Bootstrap support for Q28XR8 as seed ortholog is 100%.

Group of orthologs #1093. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 D.pseudoobscura:198

J3K4A5              	100.00%		Q29F01              	100.00%
Bootstrap support for J3K4A5 as seed ortholog is 100%.
Bootstrap support for Q29F01 as seed ortholog is 100%.

Group of orthologs #1094. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:125 D.pseudoobscura:198

J3K3Z0              	100.00%		Q29GV9              	100.00%
Bootstrap support for J3K3Z0 as seed ortholog is 99%.
Bootstrap support for Q29GV9 as seed ortholog is 100%.

Group of orthologs #1095. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 D.pseudoobscura:198

J3K9P5              	100.00%		Q29FV5              	100.00%
Bootstrap support for J3K9P5 as seed ortholog is 100%.
Bootstrap support for Q29FV5 as seed ortholog is 100%.

Group of orthologs #1096. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 D.pseudoobscura:198

J3K570              	100.00%		Q2LZU0              	100.00%
Bootstrap support for J3K570 as seed ortholog is 100%.
Bootstrap support for Q2LZU0 as seed ortholog is 100%.

Group of orthologs #1097. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 D.pseudoobscura:197

J3KF43              	100.00%		B5DKJ8              	100.00%
Bootstrap support for J3KF43 as seed ortholog is 100%.
Bootstrap support for B5DKJ8 as seed ortholog is 100%.

Group of orthologs #1098. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 D.pseudoobscura:197

J3KF75              	100.00%		Q28ZZ7              	100.00%
Bootstrap support for J3KF75 as seed ortholog is 100%.
Bootstrap support for Q28ZZ7 as seed ortholog is 100%.

Group of orthologs #1099. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 D.pseudoobscura:197

J3KDP1              	100.00%		Q29G73              	100.00%
Bootstrap support for J3KDP1 as seed ortholog is 100%.
Bootstrap support for Q29G73 as seed ortholog is 100%.

Group of orthologs #1100. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:73

J3KIU9              	100.00%		Q29IP3              	100.00%
Bootstrap support for J3KIU9 as seed ortholog is 100%.
Bootstrap support for Q29IP3 as seed ortholog is 99%.

Group of orthologs #1101. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 D.pseudoobscura:84

J3KHX7              	100.00%		B5E134              	100.00%
                    	       		Q29MJ6              	12.71%
Bootstrap support for J3KHX7 as seed ortholog is 100%.
Bootstrap support for B5E134 as seed ortholog is 99%.

Group of orthologs #1102. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:60

J3KM10              	100.00%		Q292Z1              	100.00%
                    	       		Q29KB8              	23.50%
Bootstrap support for J3KM10 as seed ortholog is 99%.
Bootstrap support for Q292Z1 as seed ortholog is 99%.

Group of orthologs #1103. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 D.pseudoobscura:196

J3KGV5              	100.00%		B5DVG3              	100.00%
Bootstrap support for J3KGV5 as seed ortholog is 100%.
Bootstrap support for B5DVG3 as seed ortholog is 100%.

Group of orthologs #1104. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 D.pseudoobscura:196

J3KJE1              	100.00%		Q28YJ4              	100.00%
Bootstrap support for J3KJE1 as seed ortholog is 100%.
Bootstrap support for Q28YJ4 as seed ortholog is 100%.

Group of orthologs #1105. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 D.pseudoobscura:196

J3KI78              	100.00%		Q29D93              	100.00%
Bootstrap support for J3KI78 as seed ortholog is 100%.
Bootstrap support for Q29D93 as seed ortholog is 100%.

Group of orthologs #1106. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:195

J3KBI4              	100.00%		B3XWN8              	100.00%
J3KFX2              	50.00%		
Bootstrap support for J3KBI4 as seed ortholog is 100%.
Bootstrap support for B3XWN8 as seed ortholog is 100%.

Group of orthologs #1107. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:195

J3KC27              	100.00%		B5DHX4              	100.00%
Bootstrap support for J3KC27 as seed ortholog is 100%.
Bootstrap support for B5DHX4 as seed ortholog is 100%.

Group of orthologs #1108. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:195

J3KL87              	100.00%		B5DHB2              	100.00%
Bootstrap support for J3KL87 as seed ortholog is 100%.
Bootstrap support for B5DHB2 as seed ortholog is 100%.

Group of orthologs #1109. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:195

J3KF12              	100.00%		Q28X32              	100.00%
Bootstrap support for J3KF12 as seed ortholog is 100%.
Bootstrap support for Q28X32 as seed ortholog is 100%.

Group of orthologs #1110. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:55

J3K862              	100.00%		Q29CY5              	100.00%
Bootstrap support for J3K862 as seed ortholog is 100%.
Bootstrap support for Q29CY5 as seed ortholog is 81%.

Group of orthologs #1111. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:195

J3KKZ8              	100.00%		Q296G0              	100.00%
Bootstrap support for J3KKZ8 as seed ortholog is 100%.
Bootstrap support for Q296G0 as seed ortholog is 100%.

Group of orthologs #1112. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:82

J3KBE0              	100.00%		Q29NY9              	100.00%
Bootstrap support for J3KBE0 as seed ortholog is 100%.
Bootstrap support for Q29NY9 as seed ortholog is 97%.

Group of orthologs #1113. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:46

J3KGB2              	100.00%		Q29N95              	100.00%
Bootstrap support for J3KGB2 as seed ortholog is 100%.
Bootstrap support for Q29N95 as seed ortholog is 23%.
Alternative seed ortholog is Q29C60 (46 bits away from this cluster)

Group of orthologs #1114. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 D.pseudoobscura:195

J3KGT6              	100.00%		Q2LYJ4              	100.00%
Bootstrap support for J3KGT6 as seed ortholog is 100%.
Bootstrap support for Q2LYJ4 as seed ortholog is 100%.

Group of orthologs #1115. Best score 194 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:111

J3KHG0              	100.00%		Q29N71              	100.00%
Bootstrap support for J3KHG0 as seed ortholog is 99%.
Bootstrap support for Q29N71 as seed ortholog is 99%.

Group of orthologs #1116. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 D.pseudoobscura:193

J3K3X4              	100.00%		Q29L20              	100.00%
Bootstrap support for J3K3X4 as seed ortholog is 100%.
Bootstrap support for Q29L20 as seed ortholog is 100%.

Group of orthologs #1117. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 D.pseudoobscura:193

J3KGJ4              	100.00%		Q29B04              	100.00%
Bootstrap support for J3KGJ4 as seed ortholog is 100%.
Bootstrap support for Q29B04 as seed ortholog is 100%.

Group of orthologs #1118. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 D.pseudoobscura:193

J3KF76              	100.00%		Q29NU9              	100.00%
Bootstrap support for J3KF76 as seed ortholog is 100%.
Bootstrap support for Q29NU9 as seed ortholog is 100%.

Group of orthologs #1119. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 D.pseudoobscura:193

J3KFL8              	100.00%		Q2LZ23              	100.00%
Bootstrap support for J3KFL8 as seed ortholog is 100%.
Bootstrap support for Q2LZ23 as seed ortholog is 100%.

Group of orthologs #1120. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:192

J3K7N3              	100.00%		Q28XN7              	100.00%
                    	       		Q28XN8              	24.03%
                    	       		Q29KU9              	23.40%
                    	       		Q28XN9              	15.64%
Bootstrap support for J3K7N3 as seed ortholog is 100%.
Bootstrap support for Q28XN7 as seed ortholog is 100%.

Group of orthologs #1121. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:192

J3KDA1              	100.00%		Q29EQ1              	100.00%
                    	       		I5AMV1              	65.45%
Bootstrap support for J3KDA1 as seed ortholog is 100%.
Bootstrap support for Q29EQ1 as seed ortholog is 100%.

Group of orthologs #1122. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:12

J3K7A0              	100.00%		Q295V0              	100.00%
Bootstrap support for J3K7A0 as seed ortholog is 100%.
Bootstrap support for Q295V0 as seed ortholog is 56%.
Alternative seed ortholog is B5E066 (12 bits away from this cluster)

Group of orthologs #1123. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:28

J3K418              	100.00%		Q29KK8              	100.00%
Bootstrap support for J3K418 as seed ortholog is 100%.
Bootstrap support for Q29KK8 as seed ortholog is 66%.
Alternative seed ortholog is Q298X2 (28 bits away from this cluster)

Group of orthologs #1124. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:192

J3KE76              	100.00%		Q29BT6              	100.00%
Bootstrap support for J3KE76 as seed ortholog is 100%.
Bootstrap support for Q29BT6 as seed ortholog is 100%.

Group of orthologs #1125. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 D.pseudoobscura:192

J3KJV0              	100.00%		Q29IT9              	100.00%
Bootstrap support for J3KJV0 as seed ortholog is 100%.
Bootstrap support for Q29IT9 as seed ortholog is 100%.

Group of orthologs #1126. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:191

J3KE41              	100.00%		Q29BP8              	100.00%
J3KJG3              	12.66%		
Bootstrap support for J3KE41 as seed ortholog is 100%.
Bootstrap support for Q29BP8 as seed ortholog is 100%.

Group of orthologs #1127. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:107

J3KGW9              	100.00%		B5DI81              	100.00%
Bootstrap support for J3KGW9 as seed ortholog is 91%.
Bootstrap support for B5DI81 as seed ortholog is 98%.

Group of orthologs #1128. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:191

J3KFG7              	100.00%		B5E1D9              	100.00%
Bootstrap support for J3KFG7 as seed ortholog is 100%.
Bootstrap support for B5E1D9 as seed ortholog is 100%.

Group of orthologs #1129. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:191

J3KD01              	100.00%		Q294B3              	100.00%
Bootstrap support for J3KD01 as seed ortholog is 100%.
Bootstrap support for Q294B3 as seed ortholog is 100%.

Group of orthologs #1130. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:191

J3KF18              	100.00%		Q291B1              	100.00%
Bootstrap support for J3KF18 as seed ortholog is 100%.
Bootstrap support for Q291B1 as seed ortholog is 100%.

Group of orthologs #1131. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:191

J3K8I2              	100.00%		Q29E53              	100.00%
Bootstrap support for J3K8I2 as seed ortholog is 100%.
Bootstrap support for Q29E53 as seed ortholog is 100%.

Group of orthologs #1132. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 D.pseudoobscura:191

J3KHZ4              	100.00%		Q293V6              	100.00%
Bootstrap support for J3KHZ4 as seed ortholog is 100%.
Bootstrap support for Q293V6 as seed ortholog is 100%.

Group of orthologs #1133. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:190

J3KGS2              	100.00%		B5DK76              	100.00%
                    	       		Q29FG2              	6.65%
Bootstrap support for J3KGS2 as seed ortholog is 100%.
Bootstrap support for B5DK76 as seed ortholog is 100%.

Group of orthologs #1134. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:190

J3KIQ9              	100.00%		Q28YQ5              	100.00%
                    	       		Q29M14              	5.66%
Bootstrap support for J3KIQ9 as seed ortholog is 100%.
Bootstrap support for Q28YQ5 as seed ortholog is 100%.

Group of orthologs #1135. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:74

J0HF35              	100.00%		Q29M32              	100.00%
Bootstrap support for J0HF35 as seed ortholog is 97%.
Bootstrap support for Q29M32 as seed ortholog is 98%.

Group of orthologs #1136. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:190

J3KBH2              	100.00%		Q29B05              	100.00%
Bootstrap support for J3KBH2 as seed ortholog is 100%.
Bootstrap support for Q29B05 as seed ortholog is 100%.

Group of orthologs #1137. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:190

J3KGA3              	100.00%		Q298M4              	100.00%
Bootstrap support for J3KGA3 as seed ortholog is 100%.
Bootstrap support for Q298M4 as seed ortholog is 100%.

Group of orthologs #1138. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:190

J3K6G5              	100.00%		Q29NF8              	100.00%
Bootstrap support for J3K6G5 as seed ortholog is 100%.
Bootstrap support for Q29NF8 as seed ortholog is 100%.

Group of orthologs #1139. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 D.pseudoobscura:190

J3KFA8              	100.00%		Q29K60              	100.00%
Bootstrap support for J3KFA8 as seed ortholog is 100%.
Bootstrap support for Q29K60 as seed ortholog is 100%.

Group of orthologs #1140. Best score 189 bits
Score difference with first non-orthologous sequence - C.immitis:189 D.pseudoobscura:112

J3KK09              	100.00%		Q29HR6              	100.00%
Bootstrap support for J3KK09 as seed ortholog is 100%.
Bootstrap support for Q29HR6 as seed ortholog is 99%.

Group of orthologs #1141. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:23 D.pseudoobscura:44

J3KAR7              	100.00%		Q29EE6              	100.00%
                    	       		B5DMF9              	37.74%
Bootstrap support for J3KAR7 as seed ortholog is 73%.
Alternative seed ortholog is J3KL24 (23 bits away from this cluster)
Bootstrap support for Q29EE6 as seed ortholog is 86%.

Group of orthologs #1142. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 D.pseudoobscura:188

J3K5E2              	100.00%		Q292D0              	100.00%
Bootstrap support for J3K5E2 as seed ortholog is 100%.
Bootstrap support for Q292D0 as seed ortholog is 100%.

Group of orthologs #1143. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 D.pseudoobscura:188

Q1E9A1              	100.00%		Q293K2              	100.00%
Bootstrap support for Q1E9A1 as seed ortholog is 100%.
Bootstrap support for Q293K2 as seed ortholog is 100%.

Group of orthologs #1144. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 D.pseudoobscura:188

J3K7L4              	100.00%		Q29MM8              	100.00%
Bootstrap support for J3K7L4 as seed ortholog is 100%.
Bootstrap support for Q29MM8 as seed ortholog is 100%.

Group of orthologs #1145. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 D.pseudoobscura:188

J3KDP4              	100.00%		Q29GP0              	100.00%
Bootstrap support for J3KDP4 as seed ortholog is 100%.
Bootstrap support for Q29GP0 as seed ortholog is 100%.

Group of orthologs #1146. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 D.pseudoobscura:96

J3K5N5              	100.00%		B5DNH3              	100.00%
                    	       		Q29B20              	100.00%
                    	       		Q29B21              	62.30%
                    	       		B5DXL8              	46.12%
                    	       		B5DYR4              	43.85%
                    	       		Q2LZY6              	43.53%
                    	       		Q29A09              	29.29%
                    	       		Q29C25              	25.08%
                    	       		Q29C24              	21.68%
Bootstrap support for J3K5N5 as seed ortholog is 100%.
Bootstrap support for B5DNH3 as seed ortholog is 99%.
Bootstrap support for Q29B20 as seed ortholog is 99%.

Group of orthologs #1147. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 D.pseudoobscura:187

J3KDN3              	100.00%		Q2M0I1              	100.00%
J3KJZ5              	37.91%		Q2M0I0              	39.62%
                    	       		Q291C7              	34.40%
                    	       		Q299Z5              	17.57%
                    	       		B5DXD9              	14.91%
                    	       		Q2M0I2              	13.74%
Bootstrap support for J3KDN3 as seed ortholog is 100%.
Bootstrap support for Q2M0I1 as seed ortholog is 100%.

Group of orthologs #1148. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:136

J3KIH0              	100.00%		Q29IV2              	100.00%
                    	       		Q294N2              	40.47%
                    	       		B5DL90              	21.10%
Bootstrap support for J3KIH0 as seed ortholog is 95%.
Bootstrap support for Q29IV2 as seed ortholog is 99%.

Group of orthologs #1149. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:99

J3KAF5              	100.00%		B5DVQ6              	100.00%
                    	       		Q299Z2              	49.14%
Bootstrap support for J3KAF5 as seed ortholog is 98%.
Bootstrap support for B5DVQ6 as seed ortholog is 99%.

Group of orthologs #1150. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:22

J0HE89              	100.00%		B5DXX9              	100.00%
Bootstrap support for J0HE89 as seed ortholog is 100%.
Bootstrap support for B5DXX9 as seed ortholog is 60%.
Alternative seed ortholog is Q29JX9 (22 bits away from this cluster)

Group of orthologs #1151. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 D.pseudoobscura:187

J3K396              	100.00%		Q29CL8              	100.00%
Bootstrap support for J3K396 as seed ortholog is 100%.
Bootstrap support for Q29CL8 as seed ortholog is 100%.

Group of orthologs #1152. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 D.pseudoobscura:187

J3KCE1              	100.00%		Q29C26              	100.00%
Bootstrap support for J3KCE1 as seed ortholog is 100%.
Bootstrap support for Q29C26 as seed ortholog is 100%.

Group of orthologs #1153. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 D.pseudoobscura:187

J3K3U8              	100.00%		Q29MA6              	100.00%
Bootstrap support for J3K3U8 as seed ortholog is 100%.
Bootstrap support for Q29MA6 as seed ortholog is 100%.

Group of orthologs #1154. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:187

J3KB34              	100.00%		Q29J97              	100.00%
Bootstrap support for J3KB34 as seed ortholog is 91%.
Bootstrap support for Q29J97 as seed ortholog is 100%.

Group of orthologs #1155. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 D.pseudoobscura:187

J3KFK1              	100.00%		Q2M0V4              	100.00%
Bootstrap support for J3KFK1 as seed ortholog is 100%.
Bootstrap support for Q2M0V4 as seed ortholog is 100%.

Group of orthologs #1156. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:186

J3K3M7              	100.00%		Q29IN0              	100.00%
Bootstrap support for J3K3M7 as seed ortholog is 100%.
Bootstrap support for Q29IN0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:186

J3K209              	100.00%		Q29KG3              	100.00%
Bootstrap support for J3K209 as seed ortholog is 100%.
Bootstrap support for Q29KG3 as seed ortholog is 100%.

Group of orthologs #1158. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:186

J3K3F8              	100.00%		Q29LH2              	100.00%
Bootstrap support for J3K3F8 as seed ortholog is 100%.
Bootstrap support for Q29LH2 as seed ortholog is 100%.

Group of orthologs #1159. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:186

J3KJM6              	100.00%		Q293J9              	100.00%
Bootstrap support for J3KJM6 as seed ortholog is 100%.
Bootstrap support for Q293J9 as seed ortholog is 100%.

Group of orthologs #1160. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 D.pseudoobscura:186

J3KL04              	100.00%		Q29KH7              	100.00%
Bootstrap support for J3KL04 as seed ortholog is 100%.
Bootstrap support for Q29KH7 as seed ortholog is 100%.

Group of orthologs #1161. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 D.pseudoobscura:97

J3K1R3              	100.00%		Q290H0              	100.00%
                    	       		Q29KG0              	15.02%
Bootstrap support for J3K1R3 as seed ortholog is 100%.
Bootstrap support for Q290H0 as seed ortholog is 99%.

Group of orthologs #1162. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 D.pseudoobscura:185

J3K9Y3              	100.00%		Q291S7              	100.00%
Bootstrap support for J3K9Y3 as seed ortholog is 100%.
Bootstrap support for Q291S7 as seed ortholog is 100%.

Group of orthologs #1163. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 D.pseudoobscura:185

J3KFG6              	100.00%		Q29K78              	100.00%
Bootstrap support for J3KFG6 as seed ortholog is 100%.
Bootstrap support for Q29K78 as seed ortholog is 100%.

Group of orthologs #1164. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 D.pseudoobscura:185

J3KJT0              	100.00%		Q29KP1              	100.00%
Bootstrap support for J3KJT0 as seed ortholog is 100%.
Bootstrap support for Q29KP1 as seed ortholog is 100%.

Group of orthologs #1165. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 D.pseudoobscura:58

J3K860              	100.00%		Q29CI8              	100.00%
                    	       		B5DVK4              	56.67%
                    	       		B5DVK3              	50.00%
                    	       		Q28XZ2              	42.00%
                    	       		B5DS78              	24.67%
Bootstrap support for J3K860 as seed ortholog is 100%.
Bootstrap support for Q29CI8 as seed ortholog is 98%.

Group of orthologs #1166. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:94

J3K3S3              	100.00%		Q29AP4              	100.00%
Bootstrap support for J3K3S3 as seed ortholog is 98%.
Bootstrap support for Q29AP4 as seed ortholog is 99%.

Group of orthologs #1167. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 D.pseudoobscura:184

J3KER6              	100.00%		Q290M7              	100.00%
Bootstrap support for J3KER6 as seed ortholog is 100%.
Bootstrap support for Q290M7 as seed ortholog is 100%.

Group of orthologs #1168. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:27 D.pseudoobscura:95

J3KL05              	100.00%		B5DVX7              	100.00%
                    	       		B5DWK7              	55.92%
Bootstrap support for J3KL05 as seed ortholog is 78%.
Bootstrap support for B5DVX7 as seed ortholog is 99%.

Group of orthologs #1169. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

J3K9Z6              	100.00%		Q29E36              	100.00%
                    	       		Q29H30              	26.86%
Bootstrap support for J3K9Z6 as seed ortholog is 100%.
Bootstrap support for Q29E36 as seed ortholog is 100%.

Group of orthologs #1170. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

I9NNA9              	100.00%		B5DY60              	100.00%
Bootstrap support for I9NNA9 as seed ortholog is 100%.
Bootstrap support for B5DY60 as seed ortholog is 100%.

Group of orthologs #1171. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

I9XLX6              	100.00%		Q29ET1              	100.00%
Bootstrap support for I9XLX6 as seed ortholog is 100%.
Bootstrap support for Q29ET1 as seed ortholog is 100%.

Group of orthologs #1172. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

J3K4H4              	100.00%		Q29C42              	100.00%
Bootstrap support for J3K4H4 as seed ortholog is 100%.
Bootstrap support for Q29C42 as seed ortholog is 100%.

Group of orthologs #1173. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

J3K328              	100.00%		Q29PD5              	100.00%
Bootstrap support for J3K328 as seed ortholog is 100%.
Bootstrap support for Q29PD5 as seed ortholog is 100%.

Group of orthologs #1174. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

J3K814              	100.00%		Q8I1B4              	100.00%
Bootstrap support for J3K814 as seed ortholog is 100%.
Bootstrap support for Q8I1B4 as seed ortholog is 100%.

Group of orthologs #1175. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:72

J3K9G3              	100.00%		Q2M045              	100.00%
Bootstrap support for J3K9G3 as seed ortholog is 97%.
Bootstrap support for Q2M045 as seed ortholog is 88%.

Group of orthologs #1176. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

J3KEY0              	100.00%		Q2M1A9              	100.00%
Bootstrap support for J3KEY0 as seed ortholog is 100%.
Bootstrap support for Q2M1A9 as seed ortholog is 100%.

Group of orthologs #1177. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 D.pseudoobscura:183

J3KLZ8              	100.00%		Q29N40              	100.00%
Bootstrap support for J3KLZ8 as seed ortholog is 100%.
Bootstrap support for Q29N40 as seed ortholog is 100%.

Group of orthologs #1178. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:43

J3K688              	100.00%		B5DQB3              	100.00%
                    	       		Q29D89              	5.57%
Bootstrap support for J3K688 as seed ortholog is 99%.
Bootstrap support for B5DQB3 as seed ortholog is 90%.

Group of orthologs #1179. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 D.pseudoobscura:182

J3K6X2              	100.00%		B5DVF5              	100.00%
                    	       		B5DQL4              	78.76%
Bootstrap support for J3K6X2 as seed ortholog is 100%.
Bootstrap support for B5DVF5 as seed ortholog is 100%.

Group of orthologs #1180. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:60

J3K2V1              	100.00%		Q28XM4              	100.00%
                    	       		Q28XM3              	60.66%
Bootstrap support for J3K2V1 as seed ortholog is 99%.
Bootstrap support for Q28XM4 as seed ortholog is 96%.

Group of orthologs #1181. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:33

I9NSL6              	100.00%		Q29I56              	100.00%
                    	       		Q29JR6              	36.55%
Bootstrap support for I9NSL6 as seed ortholog is 95%.
Bootstrap support for Q29I56 as seed ortholog is 89%.

Group of orthologs #1182. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 D.pseudoobscura:182

J3KDJ7              	100.00%		Q295Q0              	100.00%
Bootstrap support for J3KDJ7 as seed ortholog is 100%.
Bootstrap support for Q295Q0 as seed ortholog is 100%.

Group of orthologs #1183. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 D.pseudoobscura:96

J3KG76              	100.00%		Q29GS6              	100.00%
Bootstrap support for J3KG76 as seed ortholog is 100%.
Bootstrap support for Q29GS6 as seed ortholog is 99%.

Group of orthologs #1184. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 D.pseudoobscura:182

Q1E878              	100.00%		Q29PI9              	100.00%
Bootstrap support for Q1E878 as seed ortholog is 100%.
Bootstrap support for Q29PI9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

J3K4J9              	100.00%		B5DPD8              	100.00%
Bootstrap support for J3K4J9 as seed ortholog is 100%.
Bootstrap support for B5DPD8 as seed ortholog is 100%.

Group of orthologs #1186. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:63

J3K4N4              	100.00%		Q291A4              	100.00%
Bootstrap support for J3K4N4 as seed ortholog is 94%.
Bootstrap support for Q291A4 as seed ortholog is 93%.

Group of orthologs #1187. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

J3KBW2              	100.00%		Q292Z9              	100.00%
Bootstrap support for J3KBW2 as seed ortholog is 100%.
Bootstrap support for Q292Z9 as seed ortholog is 100%.

Group of orthologs #1188. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:96

J3K4A3              	100.00%		Q29KH1              	100.00%
Bootstrap support for J3K4A3 as seed ortholog is 99%.
Bootstrap support for Q29KH1 as seed ortholog is 99%.

Group of orthologs #1189. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

J3KIM5              	100.00%		Q29BZ1              	100.00%
Bootstrap support for J3KIM5 as seed ortholog is 100%.
Bootstrap support for Q29BZ1 as seed ortholog is 100%.

Group of orthologs #1190. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

J3K9Z1              	100.00%		Q2LYN4              	100.00%
Bootstrap support for J3K9Z1 as seed ortholog is 100%.
Bootstrap support for Q2LYN4 as seed ortholog is 100%.

Group of orthologs #1191. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

J3KDT4              	100.00%		Q29LB3              	100.00%
Bootstrap support for J3KDT4 as seed ortholog is 100%.
Bootstrap support for Q29LB3 as seed ortholog is 100%.

Group of orthologs #1192. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

J3KCT9              	100.00%		Q2M0S5              	100.00%
Bootstrap support for J3KCT9 as seed ortholog is 100%.
Bootstrap support for Q2M0S5 as seed ortholog is 100%.

Group of orthologs #1193. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 D.pseudoobscura:181

Q1EAH9              	100.00%		Q2LZH7              	100.00%
Bootstrap support for Q1EAH9 as seed ortholog is 100%.
Bootstrap support for Q2LZH7 as seed ortholog is 100%.

Group of orthologs #1194. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 D.pseudoobscura:180

J3KJC8              	100.00%		Q29NA6              	100.00%
                    	       		Q293Y7              	30.12%
                    	       		Q29NA5              	12.20%
Bootstrap support for J3KJC8 as seed ortholog is 100%.
Bootstrap support for Q29NA6 as seed ortholog is 100%.

Group of orthologs #1195. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 D.pseudoobscura:180

J3K4F8              	100.00%		B5DMU8              	100.00%
Bootstrap support for J3K4F8 as seed ortholog is 100%.
Bootstrap support for B5DMU8 as seed ortholog is 100%.

Group of orthologs #1196. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 D.pseudoobscura:180

J3KCH4              	100.00%		B5DLV3              	100.00%
Bootstrap support for J3KCH4 as seed ortholog is 100%.
Bootstrap support for B5DLV3 as seed ortholog is 100%.

Group of orthologs #1197. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:111

J3K3F0              	100.00%		Q29HG9              	100.00%
Bootstrap support for J3K3F0 as seed ortholog is 99%.
Bootstrap support for Q29HG9 as seed ortholog is 99%.

Group of orthologs #1198. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 D.pseudoobscura:180

J3K3G3              	100.00%		Q29HR5              	100.00%
Bootstrap support for J3K3G3 as seed ortholog is 100%.
Bootstrap support for Q29HR5 as seed ortholog is 100%.

Group of orthologs #1199. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:30

J3KBW6              	100.00%		Q298C1              	100.00%
Bootstrap support for J3KBW6 as seed ortholog is 88%.
Bootstrap support for Q298C1 as seed ortholog is 76%.

Group of orthologs #1200. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 D.pseudoobscura:135

J3KBM1              	100.00%		Q299G0              	100.00%
Bootstrap support for J3KBM1 as seed ortholog is 100%.
Bootstrap support for Q299G0 as seed ortholog is 99%.

Group of orthologs #1201. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:9 D.pseudoobscura:180

J3KJI4              	100.00%		Q29H29              	100.00%
Bootstrap support for J3KJI4 as seed ortholog is 51%.
Alternative seed ortholog is J3KAE4 (9 bits away from this cluster)
Bootstrap support for Q29H29 as seed ortholog is 100%.

Group of orthologs #1202. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:179 D.pseudoobscura:179

I9NPE4              	100.00%		Q29KX2              	100.00%
Bootstrap support for I9NPE4 as seed ortholog is 100%.
Bootstrap support for Q29KX2 as seed ortholog is 100%.

Group of orthologs #1203. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:132

J3KC71              	100.00%		Q293E8              	100.00%
Bootstrap support for J3KC71 as seed ortholog is 99%.
Bootstrap support for Q293E8 as seed ortholog is 100%.

Group of orthologs #1204. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:179 D.pseudoobscura:179

J3KGW8              	100.00%		Q29K21              	100.00%
Bootstrap support for J3KGW8 as seed ortholog is 100%.
Bootstrap support for Q29K21 as seed ortholog is 100%.

Group of orthologs #1205. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:179

Q1E180              	100.00%		Q29HA9              	100.00%
Bootstrap support for Q1E180 as seed ortholog is 99%.
Bootstrap support for Q29HA9 as seed ortholog is 100%.

Group of orthologs #1206. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:179 D.pseudoobscura:179

J3KLU5              	100.00%		Q2M047              	100.00%
Bootstrap support for J3KLU5 as seed ortholog is 100%.
Bootstrap support for Q2M047 as seed ortholog is 100%.

Group of orthologs #1207. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

J3KIA0              	100.00%		B5DS74              	100.00%
                    	       		Q29PG3              	89.55%
Bootstrap support for J3KIA0 as seed ortholog is 100%.
Bootstrap support for B5DS74 as seed ortholog is 100%.

Group of orthologs #1208. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

J3K4R3              	100.00%		B5DR31              	100.00%
Bootstrap support for J3K4R3 as seed ortholog is 100%.
Bootstrap support for B5DR31 as seed ortholog is 100%.

Group of orthologs #1209. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:35 D.pseudoobscura:178

J3K8E5              	100.00%		Q28Z17              	100.00%
Bootstrap support for J3K8E5 as seed ortholog is 98%.
Bootstrap support for Q28Z17 as seed ortholog is 100%.

Group of orthologs #1210. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

J3K9F1              	100.00%		Q28XW5              	100.00%
Bootstrap support for J3K9F1 as seed ortholog is 100%.
Bootstrap support for Q28XW5 as seed ortholog is 100%.

Group of orthologs #1211. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:117

J3K1N9              	100.00%		Q29EX0              	100.00%
Bootstrap support for J3K1N9 as seed ortholog is 100%.
Bootstrap support for Q29EX0 as seed ortholog is 99%.

Group of orthologs #1212. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

J3K468              	100.00%		Q29D05              	100.00%
Bootstrap support for J3K468 as seed ortholog is 100%.
Bootstrap support for Q29D05 as seed ortholog is 100%.

Group of orthologs #1213. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

Q1E6R9              	100.00%		Q28ZH5              	100.00%
Bootstrap support for Q1E6R9 as seed ortholog is 100%.
Bootstrap support for Q28ZH5 as seed ortholog is 100%.

Group of orthologs #1214. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

J3KEV5              	100.00%		Q29FH3              	100.00%
Bootstrap support for J3KEV5 as seed ortholog is 100%.
Bootstrap support for Q29FH3 as seed ortholog is 100%.

Group of orthologs #1215. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:25 D.pseudoobscura:117

Q1DWN4              	100.00%		Q29DY6              	100.00%
Bootstrap support for Q1DWN4 as seed ortholog is 81%.
Bootstrap support for Q29DY6 as seed ortholog is 99%.

Group of orthologs #1216. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 D.pseudoobscura:178

J3KLH6              	100.00%		Q29K52              	100.00%
Bootstrap support for J3KLH6 as seed ortholog is 100%.
Bootstrap support for Q29K52 as seed ortholog is 100%.

Group of orthologs #1217. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 D.pseudoobscura:50

J3KHX3              	100.00%		B5DKQ8              	100.00%
                    	       		B5DKQ7              	9.54%
                    	       		Q290Y8              	5.18%
                    	       		B5DXR9              	5.04%
Bootstrap support for J3KHX3 as seed ortholog is 100%.
Bootstrap support for B5DKQ8 as seed ortholog is 88%.

Group of orthologs #1218. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:105

J3KAS1              	100.00%		B5DLK8              	100.00%
                    	       		Q297N4              	15.17%
                    	       		Q29IB7              	10.69%
Bootstrap support for J3KAS1 as seed ortholog is 91%.
Bootstrap support for B5DLK8 as seed ortholog is 99%.

Group of orthologs #1219. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 D.pseudoobscura:177

J3KFP0              	100.00%		I5AMM9              	100.00%
Bootstrap support for J3KFP0 as seed ortholog is 100%.
Bootstrap support for I5AMM9 as seed ortholog is 100%.

Group of orthologs #1220. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 D.pseudoobscura:177

J3KA34              	100.00%		Q298I9              	100.00%
Bootstrap support for J3KA34 as seed ortholog is 100%.
Bootstrap support for Q298I9 as seed ortholog is 100%.

Group of orthologs #1221. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 D.pseudoobscura:120

J3KHL9              	100.00%		Q290P6              	100.00%
Bootstrap support for J3KHL9 as seed ortholog is 100%.
Bootstrap support for Q290P6 as seed ortholog is 100%.

Group of orthologs #1222. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 D.pseudoobscura:15

J3KJY2              	100.00%		Q291N4              	100.00%
J3K0A6              	14.98%		B5DID4              	40.75%
                    	       		B5DY97              	33.65%
Bootstrap support for J3KJY2 as seed ortholog is 100%.
Bootstrap support for Q291N4 as seed ortholog is 63%.
Alternative seed ortholog is Q29CG1 (15 bits away from this cluster)

Group of orthologs #1223. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 D.pseudoobscura:176

J3K6Z8              	100.00%		B5DX52              	100.00%
                    	       		Q29E54              	77.31%
Bootstrap support for J3K6Z8 as seed ortholog is 100%.
Bootstrap support for B5DX52 as seed ortholog is 100%.

Group of orthologs #1224. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 D.pseudoobscura:176

J3K9Z2              	100.00%		Q294C0              	100.00%
J3KID0              	37.48%		
Bootstrap support for J3K9Z2 as seed ortholog is 100%.
Bootstrap support for Q294C0 as seed ortholog is 100%.

Group of orthologs #1225. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 D.pseudoobscura:90

J3K2P8              	100.00%		Q29D97              	100.00%
Bootstrap support for J3K2P8 as seed ortholog is 100%.
Bootstrap support for Q29D97 as seed ortholog is 99%.

Group of orthologs #1226. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 D.pseudoobscura:176

J3K9D6              	100.00%		Q294L3              	100.00%
Bootstrap support for J3K9D6 as seed ortholog is 100%.
Bootstrap support for Q294L3 as seed ortholog is 100%.

Group of orthologs #1227. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 D.pseudoobscura:106

J3K8M4              	100.00%		Q29DY0              	100.00%
Bootstrap support for J3K8M4 as seed ortholog is 100%.
Bootstrap support for Q29DY0 as seed ortholog is 99%.

Group of orthologs #1228. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:127

J3K3S2              	100.00%		Q296B6              	100.00%
                    	       		B5DIT9              	15.95%
                    	       		B5DHN3              	8.11%
Bootstrap support for J3K3S2 as seed ortholog is 100%.
Bootstrap support for Q296B6 as seed ortholog is 99%.

Group of orthologs #1229. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

J3K3S0              	100.00%		Q29EG7              	100.00%
                    	       		B5DRL2              	22.15%
Bootstrap support for J3K3S0 as seed ortholog is 100%.
Bootstrap support for Q29EG7 as seed ortholog is 100%.

Group of orthologs #1230. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

J3K0G9              	100.00%		B5DWE4              	100.00%
Bootstrap support for J3K0G9 as seed ortholog is 100%.
Bootstrap support for B5DWE4 as seed ortholog is 100%.

Group of orthologs #1231. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

J3K9X2              	100.00%		B5DPD7              	100.00%
Bootstrap support for J3K9X2 as seed ortholog is 100%.
Bootstrap support for B5DPD7 as seed ortholog is 100%.

Group of orthologs #1232. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

J3K6G7              	100.00%		B5DXD8              	100.00%
Bootstrap support for J3K6G7 as seed ortholog is 100%.
Bootstrap support for B5DXD8 as seed ortholog is 100%.

Group of orthologs #1233. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:56 D.pseudoobscura:62

J3KJZ9              	100.00%		B5DIU6              	100.00%
Bootstrap support for J3KJZ9 as seed ortholog is 88%.
Bootstrap support for B5DIU6 as seed ortholog is 91%.

Group of orthologs #1234. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

Q1DHP3              	100.00%		B5DKY4              	100.00%
Bootstrap support for Q1DHP3 as seed ortholog is 100%.
Bootstrap support for B5DKY4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

J3KIS4              	100.00%		Q29G74              	100.00%
Bootstrap support for J3KIS4 as seed ortholog is 100%.
Bootstrap support for Q29G74 as seed ortholog is 100%.

Group of orthologs #1236. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:43

J3K9D2              	100.00%		Q95086              	100.00%
Bootstrap support for J3K9D2 as seed ortholog is 100%.
Bootstrap support for Q95086 as seed ortholog is 95%.

Group of orthologs #1237. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 D.pseudoobscura:175

J3KF69              	100.00%		Q2M1D3              	100.00%
Bootstrap support for J3KF69 as seed ortholog is 100%.
Bootstrap support for Q2M1D3 as seed ortholog is 100%.

Group of orthologs #1238. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:174

J3K8T7              	100.00%		Q291L7              	100.00%
Bootstrap support for J3K8T7 as seed ortholog is 100%.
Bootstrap support for Q291L7 as seed ortholog is 100%.

Group of orthologs #1239. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:174

J3K1U2              	100.00%		Q29I28              	100.00%
Bootstrap support for J3K1U2 as seed ortholog is 100%.
Bootstrap support for Q29I28 as seed ortholog is 100%.

Group of orthologs #1240. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:174

J3KBV9              	100.00%		Q296V7              	100.00%
Bootstrap support for J3KBV9 as seed ortholog is 100%.
Bootstrap support for Q296V7 as seed ortholog is 100%.

Group of orthologs #1241. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:174

J3K8N7              	100.00%		Q29FA5              	100.00%
Bootstrap support for J3K8N7 as seed ortholog is 100%.
Bootstrap support for Q29FA5 as seed ortholog is 100%.

Group of orthologs #1242. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:174

J3KKV4              	100.00%		Q28ZE6              	100.00%
Bootstrap support for J3KKV4 as seed ortholog is 100%.
Bootstrap support for Q28ZE6 as seed ortholog is 100%.

Group of orthologs #1243. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 D.pseudoobscura:174

J3K3E6              	100.00%		Q2LZR5              	100.00%
Bootstrap support for J3K3E6 as seed ortholog is 100%.
Bootstrap support for Q2LZR5 as seed ortholog is 100%.

Group of orthologs #1244. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:174

J3K743              	100.00%		Q29MQ5              	100.00%
Bootstrap support for J3K743 as seed ortholog is 99%.
Bootstrap support for Q29MQ5 as seed ortholog is 100%.

Group of orthologs #1245. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 D.pseudoobscura:173

J3KDF3              	100.00%		Q292E9              	100.00%
Bootstrap support for J3KDF3 as seed ortholog is 100%.
Bootstrap support for Q292E9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 D.pseudoobscura:52

Q1DHR3              	100.00%		Q28X82              	100.00%
Bootstrap support for Q1DHR3 as seed ortholog is 100%.
Bootstrap support for Q28X82 as seed ortholog is 96%.

Group of orthologs #1247. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 D.pseudoobscura:108

J3KA35              	100.00%		Q29GE0              	100.00%
Bootstrap support for J3KA35 as seed ortholog is 100%.
Bootstrap support for Q29GE0 as seed ortholog is 96%.

Group of orthologs #1248. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 D.pseudoobscura:172

J3K5F8              	100.00%		Q28YQ7              	100.00%
Bootstrap support for J3K5F8 as seed ortholog is 100%.
Bootstrap support for Q28YQ7 as seed ortholog is 100%.

Group of orthologs #1249. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:172

J3KAU3              	100.00%		Q298L0              	100.00%
Bootstrap support for J3KAU3 as seed ortholog is 98%.
Bootstrap support for Q298L0 as seed ortholog is 100%.

Group of orthologs #1250. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:63

J3K185              	100.00%		Q2LZ68              	100.00%
Bootstrap support for J3K185 as seed ortholog is 99%.
Bootstrap support for Q2LZ68 as seed ortholog is 98%.

Group of orthologs #1251. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 D.pseudoobscura:172

J3KFA3              	100.00%		Q2LZX6              	100.00%
Bootstrap support for J3KFA3 as seed ortholog is 100%.
Bootstrap support for Q2LZX6 as seed ortholog is 100%.

Group of orthologs #1252. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 D.pseudoobscura:171

J3K6R0              	100.00%		B5DVW6              	100.00%
                    	       		B5DJL9              	37.63%
                    	       		B5DY55              	13.44%
                    	       		B5DN15              	5.91%
Bootstrap support for J3K6R0 as seed ortholog is 100%.
Bootstrap support for B5DVW6 as seed ortholog is 100%.

Group of orthologs #1253. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:77

Q1E7P0              	100.00%		B5DWY3              	100.00%
                    	       		Q292N0              	15.70%
Bootstrap support for Q1E7P0 as seed ortholog is 96%.
Bootstrap support for B5DWY3 as seed ortholog is 98%.

Group of orthologs #1254. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:39 D.pseudoobscura:105

J3KKZ7              	100.00%		Q29MH7              	100.00%
                    	       		Q29JJ3              	20.53%
Bootstrap support for J3KKZ7 as seed ortholog is 71%.
Alternative seed ortholog is J3KK46 (39 bits away from this cluster)
Bootstrap support for Q29MH7 as seed ortholog is 98%.

Group of orthologs #1255. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 D.pseudoobscura:171

J3K316              	100.00%		Q294R1              	100.00%
Bootstrap support for J3K316 as seed ortholog is 100%.
Bootstrap support for Q294R1 as seed ortholog is 100%.

Group of orthologs #1256. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 D.pseudoobscura:171

J0HF86              	100.00%		Q29CL6              	100.00%
Bootstrap support for J0HF86 as seed ortholog is 100%.
Bootstrap support for Q29CL6 as seed ortholog is 100%.

Group of orthologs #1257. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 D.pseudoobscura:171

J3KDP5              	100.00%		P22673              	100.00%
Bootstrap support for J3KDP5 as seed ortholog is 100%.
Bootstrap support for P22673 as seed ortholog is 100%.

Group of orthologs #1258. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 D.pseudoobscura:171

J3KBP2              	100.00%		Q29FN3              	100.00%
Bootstrap support for J3KBP2 as seed ortholog is 100%.
Bootstrap support for Q29FN3 as seed ortholog is 100%.

Group of orthologs #1259. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 D.pseudoobscura:171

J3K7A6              	100.00%		Q29N52              	100.00%
Bootstrap support for J3K7A6 as seed ortholog is 100%.
Bootstrap support for Q29N52 as seed ortholog is 100%.

Group of orthologs #1260. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 D.pseudoobscura:170

J3KAK8              	100.00%		B5DVN2              	100.00%
                    	       		Q29DI9              	17.55%
Bootstrap support for J3KAK8 as seed ortholog is 100%.
Bootstrap support for B5DVN2 as seed ortholog is 100%.

Group of orthologs #1261. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:42

J3K134              	100.00%		Q294S7              	100.00%
J3KAC4              	41.29%		
Bootstrap support for J3K134 as seed ortholog is 72%.
Alternative seed ortholog is J3KD58 (59 bits away from this cluster)
Bootstrap support for Q294S7 as seed ortholog is 60%.
Alternative seed ortholog is Q29DW3 (42 bits away from this cluster)

Group of orthologs #1262. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 D.pseudoobscura:170

Q1E5N0              	100.00%		B5DUL5              	100.00%
                    	       		B5DNJ2              	58.57%
Bootstrap support for Q1E5N0 as seed ortholog is 100%.
Bootstrap support for B5DUL5 as seed ortholog is 100%.

Group of orthologs #1263. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:107

J3K2H8              	100.00%		Q295M1              	100.00%
Bootstrap support for J3K2H8 as seed ortholog is 97%.
Bootstrap support for Q295M1 as seed ortholog is 98%.

Group of orthologs #1264. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:63 D.pseudoobscura:48

J3K8I4              	100.00%		Q296G6              	100.00%
Bootstrap support for J3K8I4 as seed ortholog is 99%.
Bootstrap support for Q296G6 as seed ortholog is 97%.

Group of orthologs #1265. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 D.pseudoobscura:170

J3K9G8              	100.00%		Q29GX7              	100.00%
Bootstrap support for J3K9G8 as seed ortholog is 100%.
Bootstrap support for Q29GX7 as seed ortholog is 100%.

Group of orthologs #1266. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

Q1DPD9              	100.00%		Q29GU0              	100.00%
                    	       		Q298C0              	52.22%
Bootstrap support for Q1DPD9 as seed ortholog is 100%.
Bootstrap support for Q29GU0 as seed ortholog is 100%.

Group of orthologs #1267. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3K6K1              	100.00%		Q290Z2              	100.00%
Bootstrap support for J3K6K1 as seed ortholog is 100%.
Bootstrap support for Q290Z2 as seed ortholog is 100%.

Group of orthologs #1268. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:169

J3KDH2              	100.00%		B5DZN2              	100.00%
Bootstrap support for J3KDH2 as seed ortholog is 98%.
Bootstrap support for B5DZN2 as seed ortholog is 100%.

Group of orthologs #1269. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3K2C3              	100.00%		Q29C92              	100.00%
Bootstrap support for J3K2C3 as seed ortholog is 100%.
Bootstrap support for Q29C92 as seed ortholog is 100%.

Group of orthologs #1270. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3KIL5              	100.00%		B5DYB6              	100.00%
Bootstrap support for J3KIL5 as seed ortholog is 100%.
Bootstrap support for B5DYB6 as seed ortholog is 100%.

Group of orthologs #1271. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3KIP6              	100.00%		B5E0A0              	100.00%
Bootstrap support for J3KIP6 as seed ortholog is 100%.
Bootstrap support for B5E0A0 as seed ortholog is 100%.

Group of orthologs #1272. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3K850              	100.00%		Q298W2              	100.00%
Bootstrap support for J3K850 as seed ortholog is 100%.
Bootstrap support for Q298W2 as seed ortholog is 100%.

Group of orthologs #1273. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

Q1DKL9              	100.00%		Q28ZT4              	100.00%
Bootstrap support for Q1DKL9 as seed ortholog is 100%.
Bootstrap support for Q28ZT4 as seed ortholog is 100%.

Group of orthologs #1274. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3KL27              	100.00%		Q293T8              	100.00%
Bootstrap support for J3KL27 as seed ortholog is 100%.
Bootstrap support for Q293T8 as seed ortholog is 100%.

Group of orthologs #1275. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 D.pseudoobscura:169

J3K2E6              	100.00%		Q2M105              	100.00%
Bootstrap support for J3K2E6 as seed ortholog is 100%.
Bootstrap support for Q2M105 as seed ortholog is 100%.

Group of orthologs #1276. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3K1N2              	100.00%		Q29E61              	100.00%
                    	       		Q29DC5              	13.57%
                    	       		Q29E62              	13.21%
Bootstrap support for J3K1N2 as seed ortholog is 100%.
Bootstrap support for Q29E61 as seed ortholog is 100%.

Group of orthologs #1277. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:59

I9XM10              	100.00%		B5DY45              	100.00%
Bootstrap support for I9XM10 as seed ortholog is 99%.
Bootstrap support for B5DY45 as seed ortholog is 96%.

Group of orthologs #1278. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3KBG7              	100.00%		B5DWD6              	100.00%
Bootstrap support for J3KBG7 as seed ortholog is 100%.
Bootstrap support for B5DWD6 as seed ortholog is 100%.

Group of orthologs #1279. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3KFY7              	100.00%		B5DRX9              	100.00%
Bootstrap support for J3KFY7 as seed ortholog is 100%.
Bootstrap support for B5DRX9 as seed ortholog is 100%.

Group of orthologs #1280. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3K315              	100.00%		Q29CG9              	100.00%
Bootstrap support for J3K315 as seed ortholog is 100%.
Bootstrap support for Q29CG9 as seed ortholog is 100%.

Group of orthologs #1281. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3KI19              	100.00%		Q291F7              	100.00%
Bootstrap support for J3KI19 as seed ortholog is 100%.
Bootstrap support for Q291F7 as seed ortholog is 100%.

Group of orthologs #1282. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3KL15              	100.00%		Q298L1              	100.00%
Bootstrap support for J3KL15 as seed ortholog is 100%.
Bootstrap support for Q298L1 as seed ortholog is 100%.

Group of orthologs #1283. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 D.pseudoobscura:168

J3KCT4              	100.00%		Q29M53              	100.00%
Bootstrap support for J3KCT4 as seed ortholog is 100%.
Bootstrap support for Q29M53 as seed ortholog is 100%.

Group of orthologs #1284. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:51

J3KJZ8              	100.00%		Q2M0M1              	100.00%
Bootstrap support for J3KJZ8 as seed ortholog is 99%.
Bootstrap support for Q2M0M1 as seed ortholog is 97%.

Group of orthologs #1285. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:167 D.pseudoobscura:167

J3K9U6              	100.00%		B5DUI6              	100.00%
                    	       		Q294T9              	100.00%
Bootstrap support for J3K9U6 as seed ortholog is 100%.
Bootstrap support for B5DUI6 as seed ortholog is 100%.
Bootstrap support for Q294T9 as seed ortholog is 100%.

Group of orthologs #1286. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:167 D.pseudoobscura:167

J3KBT5              	100.00%		Q28WM9              	100.00%
Bootstrap support for J3KBT5 as seed ortholog is 100%.
Bootstrap support for Q28WM9 as seed ortholog is 100%.

Group of orthologs #1287. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:167 D.pseudoobscura:167

J3KGX3              	100.00%		Q28ZP0              	100.00%
Bootstrap support for J3KGX3 as seed ortholog is 100%.
Bootstrap support for Q28ZP0 as seed ortholog is 100%.

Group of orthologs #1288. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:166 D.pseudoobscura:121

J3KD95              	100.00%		Q29KP2              	100.00%
                    	       		Q29KP3              	23.27%
Bootstrap support for J3KD95 as seed ortholog is 100%.
Bootstrap support for Q29KP2 as seed ortholog is 99%.

Group of orthologs #1289. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:166 D.pseudoobscura:118

J3KJJ7              	100.00%		Q29EZ4              	100.00%
Bootstrap support for J3KJJ7 as seed ortholog is 100%.
Bootstrap support for Q29EZ4 as seed ortholog is 99%.

Group of orthologs #1290. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:166 D.pseudoobscura:166

J3KJM5              	100.00%		Q2M0U1              	100.00%
Bootstrap support for J3KJM5 as seed ortholog is 100%.
Bootstrap support for Q2M0U1 as seed ortholog is 100%.

Group of orthologs #1291. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:165

J3KAH7              	100.00%		Q29N79              	100.00%
J0HI21              	30.11%		Q2LZ95              	20.34%
Bootstrap support for J3KAH7 as seed ortholog is 100%.
Bootstrap support for Q29N79 as seed ortholog is 100%.

Group of orthologs #1292. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:165

J3KJ96              	100.00%		Q291H4              	100.00%
                    	       		Q297F5              	37.24%
Bootstrap support for J3KJ96 as seed ortholog is 100%.
Bootstrap support for Q291H4 as seed ortholog is 100%.

Group of orthologs #1293. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:165

J0HFY9              	100.00%		B5DLW5              	100.00%
Bootstrap support for J0HFY9 as seed ortholog is 100%.
Bootstrap support for B5DLW5 as seed ortholog is 100%.

Group of orthologs #1294. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:165

I9NN55              	100.00%		Q29F17              	100.00%
Bootstrap support for I9NN55 as seed ortholog is 100%.
Bootstrap support for Q29F17 as seed ortholog is 100%.

Group of orthologs #1295. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:165

J3KJC7              	100.00%		Q28X29              	100.00%
Bootstrap support for J3KJC7 as seed ortholog is 100%.
Bootstrap support for Q28X29 as seed ortholog is 100%.

Group of orthologs #1296. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 D.pseudoobscura:165

J3KM47              	100.00%		Q29G82              	100.00%
Bootstrap support for J3KM47 as seed ortholog is 100%.
Bootstrap support for Q29G82 as seed ortholog is 100%.

Group of orthologs #1297. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:39

Q1DNC5              	100.00%		Q29I25              	100.00%
Bootstrap support for Q1DNC5 as seed ortholog is 99%.
Bootstrap support for Q29I25 as seed ortholog is 86%.

Group of orthologs #1298. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:164 D.pseudoobscura:164

J3KJ81              	100.00%		Q2LYI7              	100.00%
Bootstrap support for J3KJ81 as seed ortholog is 100%.
Bootstrap support for Q2LYI7 as seed ortholog is 100%.

Group of orthologs #1299. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:107

J3K8N3              	100.00%		B5E1J6              	45.66%
J3KG41              	100.00%		Q28Z33              	100.00%
J3K5Y2              	100.00%		Q297W3              	100.00%
                    	       		Q28ZD8              	43.82%
                    	       		B5DQ85              	42.89%
                    	       		I5AP16              	24.61%
                    	       		Q297J4              	12.50%
                    	       		B5DIJ9              	7.16%
                    	       		Q29M60              	5.26%
Bootstrap support for J3K8N3 as seed ortholog is 100%.
Bootstrap support for J3KG41 as seed ortholog is 100%.
Bootstrap support for J3K5Y2 as seed ortholog is 100%.
Bootstrap support for Q28Z33 as seed ortholog is 99%.
Bootstrap support for Q297W3 as seed ortholog is 99%.

Group of orthologs #1300. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J0HH35              	100.00%		Q2LYQ7              	100.00%
                    	       		Q29EA1              	13.77%
                    	       		Q294F1              	13.21%
Bootstrap support for J0HH35 as seed ortholog is 100%.
Bootstrap support for Q2LYQ7 as seed ortholog is 100%.

Group of orthologs #1301. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:65

J3KEX5              	100.00%		B5DL93              	100.00%
                    	       		B5DW67              	80.50%
Bootstrap support for J3KEX5 as seed ortholog is 100%.
Bootstrap support for B5DL93 as seed ortholog is 99%.

Group of orthologs #1302. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:72

I9XN44              	100.00%		Q29CH0              	100.00%
J3K345              	100.00%		
Bootstrap support for I9XN44 as seed ortholog is 97%.
Bootstrap support for J3K345 as seed ortholog is 94%.
Bootstrap support for Q29CH0 as seed ortholog is 97%.

Group of orthologs #1303. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:48

J3KLH4              	100.00%		Q295L9              	100.00%
                    	       		B5DQK5              	5.22%
Bootstrap support for J3KLH4 as seed ortholog is 91%.
Bootstrap support for Q295L9 as seed ortholog is 95%.

Group of orthologs #1304. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3K138              	100.00%		Q28X86              	100.00%
Bootstrap support for J3K138 as seed ortholog is 100%.
Bootstrap support for Q28X86 as seed ortholog is 100%.

Group of orthologs #1305. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:89

J3K397              	100.00%		P84323              	100.00%
Bootstrap support for J3K397 as seed ortholog is 100%.
Bootstrap support for P84323 as seed ortholog is 100%.

Group of orthologs #1306. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3K5J5              	100.00%		Q292B4              	100.00%
Bootstrap support for J3K5J5 as seed ortholog is 100%.
Bootstrap support for Q292B4 as seed ortholog is 100%.

Group of orthologs #1307. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3K918              	100.00%		Q290Q8              	100.00%
Bootstrap support for J3K918 as seed ortholog is 100%.
Bootstrap support for Q290Q8 as seed ortholog is 100%.

Group of orthologs #1308. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

Q1DI23              	100.00%		Q28XU9              	100.00%
Bootstrap support for Q1DI23 as seed ortholog is 100%.
Bootstrap support for Q28XU9 as seed ortholog is 100%.

Group of orthologs #1309. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3K994              	100.00%		Q29FV6              	100.00%
Bootstrap support for J3K994 as seed ortholog is 100%.
Bootstrap support for Q29FV6 as seed ortholog is 100%.

Group of orthologs #1310. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3K5X8              	100.00%		Q29K64              	100.00%
Bootstrap support for J3K5X8 as seed ortholog is 100%.
Bootstrap support for Q29K64 as seed ortholog is 100%.

Group of orthologs #1311. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3KHR9              	100.00%		Q297B7              	100.00%
Bootstrap support for J3KHR9 as seed ortholog is 100%.
Bootstrap support for Q297B7 as seed ortholog is 100%.

Group of orthologs #1312. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3KBU8              	100.00%		Q29GG6              	100.00%
Bootstrap support for J3KBU8 as seed ortholog is 100%.
Bootstrap support for Q29GG6 as seed ortholog is 100%.

Group of orthologs #1313. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3KDL9              	100.00%		Q29KQ6              	100.00%
Bootstrap support for J3KDL9 as seed ortholog is 100%.
Bootstrap support for Q29KQ6 as seed ortholog is 100%.

Group of orthologs #1314. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 D.pseudoobscura:163

J3KES4              	100.00%		Q29M52              	100.00%
Bootstrap support for J3KES4 as seed ortholog is 100%.
Bootstrap support for Q29M52 as seed ortholog is 100%.

Group of orthologs #1315. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 D.pseudoobscura:97

I9NPF2              	100.00%		Q298H1              	100.00%
Bootstrap support for I9NPF2 as seed ortholog is 100%.
Bootstrap support for Q298H1 as seed ortholog is 99%.

Group of orthologs #1316. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 D.pseudoobscura:162

Q1E6M1              	100.00%		B5DS02              	100.00%
Bootstrap support for Q1E6M1 as seed ortholog is 100%.
Bootstrap support for B5DS02 as seed ortholog is 100%.

Group of orthologs #1317. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:38 D.pseudoobscura:162

J3KBQ7              	100.00%		Q296T6              	100.00%
Bootstrap support for J3KBQ7 as seed ortholog is 90%.
Bootstrap support for Q296T6 as seed ortholog is 100%.

Group of orthologs #1318. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 D.pseudoobscura:94

J3KET9              	100.00%		Q293Z6              	100.00%
Bootstrap support for J3KET9 as seed ortholog is 100%.
Bootstrap support for Q293Z6 as seed ortholog is 99%.

Group of orthologs #1319. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 D.pseudoobscura:162

J3KJJ0              	100.00%		Q295Q1              	100.00%
Bootstrap support for J3KJJ0 as seed ortholog is 100%.
Bootstrap support for Q295Q1 as seed ortholog is 100%.

Group of orthologs #1320. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 D.pseudoobscura:161

J3K9L4              	100.00%		Q299A3              	100.00%
Bootstrap support for J3K9L4 as seed ortholog is 100%.
Bootstrap support for Q299A3 as seed ortholog is 100%.

Group of orthologs #1321. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 D.pseudoobscura:161

J3KC38              	100.00%		Q299C5              	100.00%
Bootstrap support for J3KC38 as seed ortholog is 100%.
Bootstrap support for Q299C5 as seed ortholog is 100%.

Group of orthologs #1322. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 D.pseudoobscura:161

J3K1X9              	100.00%		Q29MT3              	100.00%
Bootstrap support for J3K1X9 as seed ortholog is 100%.
Bootstrap support for Q29MT3 as seed ortholog is 100%.

Group of orthologs #1323. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 D.pseudoobscura:161

J3KM97              	100.00%		Q295M4              	100.00%
Bootstrap support for J3KM97 as seed ortholog is 100%.
Bootstrap support for Q295M4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 D.pseudoobscura:161

J3KHP9              	100.00%		Q29NB2              	100.00%
Bootstrap support for J3KHP9 as seed ortholog is 100%.
Bootstrap support for Q29NB2 as seed ortholog is 100%.

Group of orthologs #1325. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3KBF5              	100.00%		B5DLL1              	100.00%
                    	       		B5E0K0              	66.54%
                    	       		B5DLP1              	49.62%
Bootstrap support for J3KBF5 as seed ortholog is 100%.
Bootstrap support for B5DLL1 as seed ortholog is 100%.

Group of orthologs #1326. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3KM75              	100.00%		Q2M082              	100.00%
                    	       		Q29IY8              	7.94%
Bootstrap support for J3KM75 as seed ortholog is 100%.
Bootstrap support for Q2M082 as seed ortholog is 100%.

Group of orthologs #1327. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3K1R7              	100.00%		Q291L3              	100.00%
Bootstrap support for J3K1R7 as seed ortholog is 100%.
Bootstrap support for Q291L3 as seed ortholog is 100%.

Group of orthologs #1328. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3K2I6              	100.00%		Q29MI4              	100.00%
Bootstrap support for J3K2I6 as seed ortholog is 100%.
Bootstrap support for Q29MI4 as seed ortholog is 100%.

Group of orthologs #1329. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3KD14              	100.00%		Q29FE4              	100.00%
Bootstrap support for J3KD14 as seed ortholog is 100%.
Bootstrap support for Q29FE4 as seed ortholog is 100%.

Group of orthologs #1330. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:102

J3KD15              	100.00%		Q29G97              	100.00%
Bootstrap support for J3KD15 as seed ortholog is 98%.
Bootstrap support for Q29G97 as seed ortholog is 97%.

Group of orthologs #1331. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3KDM4              	100.00%		Q29GM7              	100.00%
Bootstrap support for J3KDM4 as seed ortholog is 100%.
Bootstrap support for Q29GM7 as seed ortholog is 100%.

Group of orthologs #1332. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:160

J3KIR5              	100.00%		Q29DQ0              	100.00%
Bootstrap support for J3KIR5 as seed ortholog is 95%.
Bootstrap support for Q29DQ0 as seed ortholog is 100%.

Group of orthologs #1333. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 D.pseudoobscura:160

J3KB94              	100.00%		Q2M144              	100.00%
Bootstrap support for J3KB94 as seed ortholog is 100%.
Bootstrap support for Q2M144 as seed ortholog is 100%.

Group of orthologs #1334. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:160

J3KHH4              	100.00%		Q29NU4              	100.00%
Bootstrap support for J3KHH4 as seed ortholog is 99%.
Bootstrap support for Q29NU4 as seed ortholog is 100%.

Group of orthologs #1335. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:73 D.pseudoobscura:42

J3K445              	100.00%		Q296Z5              	100.00%
                    	       		B5DNC4              	41.26%
Bootstrap support for J3K445 as seed ortholog is 99%.
Bootstrap support for Q296Z5 as seed ortholog is 92%.

Group of orthologs #1336. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J0HGK9              	100.00%		Q29MT2              	100.00%
                    	       		Q29MT1              	5.88%
Bootstrap support for J0HGK9 as seed ortholog is 100%.
Bootstrap support for Q29MT2 as seed ortholog is 100%.

Group of orthologs #1337. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3KLE8              	100.00%		Q29GG2              	100.00%
                    	       		Q29AB4              	35.99%
Bootstrap support for J3KLE8 as seed ortholog is 100%.
Bootstrap support for Q29GG2 as seed ortholog is 100%.

Group of orthologs #1338. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3K6I2              	100.00%		B5DXR7              	100.00%
Bootstrap support for J3K6I2 as seed ortholog is 100%.
Bootstrap support for B5DXR7 as seed ortholog is 100%.

Group of orthologs #1339. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3K742              	100.00%		B5DZ21              	100.00%
Bootstrap support for J3K742 as seed ortholog is 100%.
Bootstrap support for B5DZ21 as seed ortholog is 100%.

Group of orthologs #1340. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3K0V7              	100.00%		Q29DK7              	100.00%
Bootstrap support for J3K0V7 as seed ortholog is 100%.
Bootstrap support for Q29DK7 as seed ortholog is 100%.

Group of orthologs #1341. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3K2E7              	100.00%		Q29LH3              	100.00%
Bootstrap support for J3K2E7 as seed ortholog is 100%.
Bootstrap support for Q29LH3 as seed ortholog is 100%.

Group of orthologs #1342. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3KFX5              	100.00%		Q298J1              	100.00%
Bootstrap support for J3KFX5 as seed ortholog is 100%.
Bootstrap support for Q298J1 as seed ortholog is 100%.

Group of orthologs #1343. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:159

J3K8J9              	100.00%		Q2LZP4              	100.00%
Bootstrap support for J3K8J9 as seed ortholog is 100%.
Bootstrap support for Q2LZP4 as seed ortholog is 100%.

Group of orthologs #1344. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 D.pseudoobscura:80

J3KLE5              	100.00%		Q29E19              	100.00%
Bootstrap support for J3KLE5 as seed ortholog is 100%.
Bootstrap support for Q29E19 as seed ortholog is 99%.

Group of orthologs #1345. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:74

J3KFQ9              	100.00%		B5E1G5              	100.00%
Q1E3R8              	37.12%		Q28X25              	27.14%
J3KCK2              	30.03%		Q28X24              	18.21%
                    	       		Q29E12              	16.43%
                    	       		Q299Y8              	14.29%
                    	       		B5E1G6              	10.00%
                    	       		B5E1G7              	8.57%
                    	       		B5E1G8              	8.57%
Bootstrap support for J3KFQ9 as seed ortholog is 97%.
Bootstrap support for B5E1G5 as seed ortholog is 94%.

Group of orthologs #1346. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 D.pseudoobscura:158

J3K3I3              	100.00%		Q290H7              	100.00%
Bootstrap support for J3K3I3 as seed ortholog is 100%.
Bootstrap support for Q290H7 as seed ortholog is 100%.

Group of orthologs #1347. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:92 D.pseudoobscura:158

I9XJX8              	100.00%		Q29JF1              	100.00%
Bootstrap support for I9XJX8 as seed ortholog is 99%.
Bootstrap support for Q29JF1 as seed ortholog is 100%.

Group of orthologs #1348. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 D.pseudoobscura:158

I9NM14              	100.00%		Q29NF6              	100.00%
Bootstrap support for I9NM14 as seed ortholog is 100%.
Bootstrap support for Q29NF6 as seed ortholog is 100%.

Group of orthologs #1349. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 D.pseudoobscura:158

J3K8B6              	100.00%		Q29D54              	100.00%
Bootstrap support for J3K8B6 as seed ortholog is 100%.
Bootstrap support for Q29D54 as seed ortholog is 100%.

Group of orthologs #1350. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:18 D.pseudoobscura:29

J3KII8              	100.00%		Q2M043              	100.00%
Bootstrap support for J3KII8 as seed ortholog is 61%.
Alternative seed ortholog is J3KKQ3 (18 bits away from this cluster)
Bootstrap support for Q2M043 as seed ortholog is 87%.

Group of orthologs #1351. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 D.pseudoobscura:85

J3K6B6              	100.00%		Q29E69              	100.00%
                    	       		B5DWP3              	59.76%
                    	       		B5DR54              	33.63%
                    	       		B5DK99              	20.40%
Bootstrap support for J3K6B6 as seed ortholog is 100%.
Bootstrap support for Q29E69 as seed ortholog is 94%.

Group of orthologs #1352. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 D.pseudoobscura:157

J3K514              	100.00%		Q29AQ9              	100.00%
Bootstrap support for J3K514 as seed ortholog is 100%.
Bootstrap support for Q29AQ9 as seed ortholog is 100%.

Group of orthologs #1353. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 D.pseudoobscura:157

J3KDR1              	100.00%		Q29FA0              	100.00%
Bootstrap support for J3KDR1 as seed ortholog is 100%.
Bootstrap support for Q29FA0 as seed ortholog is 100%.

Group of orthologs #1354. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 D.pseudoobscura:157

J3K7L1              	100.00%		Q2M0D4              	100.00%
Bootstrap support for J3K7L1 as seed ortholog is 100%.
Bootstrap support for Q2M0D4 as seed ortholog is 100%.

Group of orthologs #1355. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

I9NQ62              	100.00%		Q291H8              	100.00%
J3K7J6              	57.67%		
J3KG23              	32.98%		
J3K5E9              	32.36%		
J3KKC3              	30.86%		
I9NTF7              	11.73%		
Bootstrap support for I9NQ62 as seed ortholog is 100%.
Bootstrap support for Q291H8 as seed ortholog is 100%.

Group of orthologs #1356. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

Q1E4K5              	100.00%		B5DLB9              	100.00%
                    	       		Q294X0              	43.16%
Bootstrap support for Q1E4K5 as seed ortholog is 100%.
Bootstrap support for B5DLB9 as seed ortholog is 100%.

Group of orthologs #1357. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:65

J3K0C2              	100.00%		Q29MT6              	100.00%
                    	       		B5DJK5              	37.69%
Bootstrap support for J3K0C2 as seed ortholog is 100%.
Bootstrap support for Q29MT6 as seed ortholog is 99%.

Group of orthologs #1358. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

I9NPP6              	100.00%		Q28XM1              	100.00%
Bootstrap support for I9NPP6 as seed ortholog is 100%.
Bootstrap support for Q28XM1 as seed ortholog is 100%.

Group of orthologs #1359. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

Q1DHB6              	100.00%		B5DJJ2              	100.00%
Bootstrap support for Q1DHB6 as seed ortholog is 100%.
Bootstrap support for B5DJJ2 as seed ortholog is 100%.

Group of orthologs #1360. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

J3K3E1              	100.00%		Q29A33              	100.00%
Bootstrap support for J3K3E1 as seed ortholog is 100%.
Bootstrap support for Q29A33 as seed ortholog is 100%.

Group of orthologs #1361. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

J3K2D1              	100.00%		Q2LYW1              	100.00%
Bootstrap support for J3K2D1 as seed ortholog is 100%.
Bootstrap support for Q2LYW1 as seed ortholog is 100%.

Group of orthologs #1362. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

J3KHZ8              	100.00%		Q29H31              	100.00%
Bootstrap support for J3KHZ8 as seed ortholog is 100%.
Bootstrap support for Q29H31 as seed ortholog is 100%.

Group of orthologs #1363. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 D.pseudoobscura:156

J3K9Z9              	100.00%		Q2M016              	100.00%
Bootstrap support for J3K9Z9 as seed ortholog is 100%.
Bootstrap support for Q2M016 as seed ortholog is 100%.

Group of orthologs #1364. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:115

D2YW48              	100.00%		Q29BM6              	100.00%
                    	       		Q29BM5              	51.16%
Bootstrap support for D2YW48 as seed ortholog is 99%.
Bootstrap support for Q29BM6 as seed ortholog is 99%.

Group of orthologs #1365. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:155

J3K552              	100.00%		Q297N6              	100.00%
Bootstrap support for J3K552 as seed ortholog is 100%.
Bootstrap support for Q297N6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:155

J0HE82              	100.00%		Q29MN8              	100.00%
Bootstrap support for J0HE82 as seed ortholog is 100%.
Bootstrap support for Q29MN8 as seed ortholog is 100%.

Group of orthologs #1367. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:155

J3KD50              	100.00%		Q298W5              	100.00%
Bootstrap support for J3KD50 as seed ortholog is 100%.
Bootstrap support for Q298W5 as seed ortholog is 100%.

Group of orthologs #1368. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:155

J3KD06              	100.00%		Q29MH9              	100.00%
Bootstrap support for J3KD06 as seed ortholog is 100%.
Bootstrap support for Q29MH9 as seed ortholog is 100%.

Group of orthologs #1369. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:155

J3KL47              	100.00%		Q29HV1              	100.00%
Bootstrap support for J3KL47 as seed ortholog is 100%.
Bootstrap support for Q29HV1 as seed ortholog is 100%.

Group of orthologs #1370. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 D.pseudoobscura:155

J3KIG2              	100.00%		Q2M0K6              	100.00%
Bootstrap support for J3KIG2 as seed ortholog is 100%.
Bootstrap support for Q2M0K6 as seed ortholog is 100%.

Group of orthologs #1371. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:154

J3K593              	100.00%		B5DXD5              	100.00%
Bootstrap support for J3K593 as seed ortholog is 100%.
Bootstrap support for B5DXD5 as seed ortholog is 100%.

Group of orthologs #1372. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:154

J3K4Y8              	100.00%		B5DYF9              	100.00%
Bootstrap support for J3K4Y8 as seed ortholog is 100%.
Bootstrap support for B5DYF9 as seed ortholog is 100%.

Group of orthologs #1373. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:154

J3K7L9              	100.00%		Q29B23              	100.00%
Bootstrap support for J3K7L9 as seed ortholog is 100%.
Bootstrap support for Q29B23 as seed ortholog is 100%.

Group of orthologs #1374. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:154

J3KDL4              	100.00%		Q294T7              	100.00%
Bootstrap support for J3KDL4 as seed ortholog is 100%.
Bootstrap support for Q294T7 as seed ortholog is 100%.

Group of orthologs #1375. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 D.pseudoobscura:154

J3K3K0              	100.00%		Q29I26              	100.00%
Bootstrap support for J3K3K0 as seed ortholog is 100%.
Bootstrap support for Q29I26 as seed ortholog is 100%.

Group of orthologs #1376. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:18 D.pseudoobscura:88

J3K8F4              	100.00%		Q2LZ86              	100.00%
Bootstrap support for J3K8F4 as seed ortholog is 47%.
Alternative seed ortholog is J3KEU1 (18 bits away from this cluster)
Bootstrap support for Q2LZ86 as seed ortholog is 99%.

Group of orthologs #1377. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:24 D.pseudoobscura:154

Q1DTG2              	100.00%		Q29BA0              	100.00%
Bootstrap support for Q1DTG2 as seed ortholog is 97%.
Bootstrap support for Q29BA0 as seed ortholog is 100%.

Group of orthologs #1378. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3K9H0              	100.00%		Q290Z8              	100.00%
                    	       		Q29A22              	35.51%
                    	       		Q29K12              	30.31%
                    	       		Q29KR3              	27.49%
                    	       		Q296X1              	23.63%
                    	       		Q29AY9              	22.88%
                    	       		Q29KR9              	21.99%
                    	       		Q296X2              	20.06%
                    	       		Q29M66              	20.06%
                    	       		Q29AY7              	18.13%
                    	       		Q29KR5              	17.83%
                    	       		Q29DC9              	17.68%
                    	       		B5DU62              	17.24%
                    	       		B5DY09              	15.30%
                    	       		B5DJN7              	15.16%
                    	       		B5DUD8              	14.56%
                    	       		Q29KR8              	14.41%
                    	       		Q28WT8              	12.93%
                    	       		Q29AY8              	12.04%
Bootstrap support for J3K9H0 as seed ortholog is 100%.
Bootstrap support for Q290Z8 as seed ortholog is 100%.

Group of orthologs #1379. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3KM58              	100.00%		Q29AS8              	100.00%
J3K3W8              	24.01%		Q29AS7              	35.17%
I9NSG1              	19.73%		
J3KIR9              	17.75%		
J3KLK8              	17.22%		
J3K0P6              	15.55%		
J3KAY1              	14.93%		
J3KKI0              	13.88%		
J3KDZ0              	10.96%		
J3K4A8              	10.86%		
Bootstrap support for J3KM58 as seed ortholog is 100%.
Bootstrap support for Q29AS8 as seed ortholog is 100%.

Group of orthologs #1380. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:56 D.pseudoobscura:28

J3KB13              	100.00%		Q29LX7              	100.00%
J3KJU9              	37.81%		Q29LX8              	36.62%
J3K2L8              	6.71%		Q297L4              	20.83%
Bootstrap support for J3KB13 as seed ortholog is 95%.
Bootstrap support for Q29LX7 as seed ortholog is 81%.

Group of orthologs #1381. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J0HG53              	100.00%		Q29N05              	100.00%
J3KH45              	8.30%		Q29PC1              	30.88%
Bootstrap support for J0HG53 as seed ortholog is 100%.
Bootstrap support for Q29N05 as seed ortholog is 100%.

Group of orthologs #1382. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

I9XJB2              	100.00%		Q29AF7              	100.00%
Bootstrap support for I9XJB2 as seed ortholog is 100%.
Bootstrap support for Q29AF7 as seed ortholog is 100%.

Group of orthologs #1383. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3K790              	100.00%		Q295N3              	100.00%
Bootstrap support for J3K790 as seed ortholog is 100%.
Bootstrap support for Q295N3 as seed ortholog is 100%.

Group of orthologs #1384. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3K6P4              	100.00%		Q299D5              	100.00%
Bootstrap support for J3K6P4 as seed ortholog is 100%.
Bootstrap support for Q299D5 as seed ortholog is 100%.

Group of orthologs #1385. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:26 D.pseudoobscura:44

J3KCM2              	100.00%		Q291I1              	100.00%
Bootstrap support for J3KCM2 as seed ortholog is 70%.
Alternative seed ortholog is I9NTF1 (26 bits away from this cluster)
Bootstrap support for Q291I1 as seed ortholog is 83%.

Group of orthologs #1386. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3KDF4              	100.00%		Q293A7              	100.00%
Bootstrap support for J3KDF4 as seed ortholog is 100%.
Bootstrap support for Q293A7 as seed ortholog is 100%.

Group of orthologs #1387. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3KHT4              	100.00%		Q297L1              	100.00%
Bootstrap support for J3KHT4 as seed ortholog is 100%.
Bootstrap support for Q297L1 as seed ortholog is 100%.

Group of orthologs #1388. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 D.pseudoobscura:153

J3KF26              	100.00%		Q29FL0              	100.00%
Bootstrap support for J3KF26 as seed ortholog is 100%.
Bootstrap support for Q29FL0 as seed ortholog is 100%.

Group of orthologs #1389. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:153

J3KEK1              	100.00%		Q29I14              	100.00%
Bootstrap support for J3KEK1 as seed ortholog is 95%.
Bootstrap support for Q29I14 as seed ortholog is 100%.

Group of orthologs #1390. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:152

J3K0X9              	100.00%		Q29JE6              	100.00%
J3KE69              	17.56%		
Bootstrap support for J3K0X9 as seed ortholog is 100%.
Bootstrap support for Q29JE6 as seed ortholog is 100%.

Group of orthologs #1391. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:152

J3KHL0              	100.00%		B5DK41              	100.00%
Bootstrap support for J3KHL0 as seed ortholog is 100%.
Bootstrap support for B5DK41 as seed ortholog is 100%.

Group of orthologs #1392. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:152

J3K2W6              	100.00%		Q28ZD5              	100.00%
Bootstrap support for J3K2W6 as seed ortholog is 100%.
Bootstrap support for Q28ZD5 as seed ortholog is 100%.

Group of orthologs #1393. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:152

J3KBC3              	100.00%		Q29IW9              	100.00%
Bootstrap support for J3KBC3 as seed ortholog is 100%.
Bootstrap support for Q29IW9 as seed ortholog is 100%.

Group of orthologs #1394. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:152

J3K8S9              	100.00%		Q29PH7              	100.00%
Bootstrap support for J3K8S9 as seed ortholog is 100%.
Bootstrap support for Q29PH7 as seed ortholog is 100%.

Group of orthologs #1395. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:49

J3KHW8              	100.00%		Q29IK7              	100.00%
Bootstrap support for J3KHW8 as seed ortholog is 100%.
Bootstrap support for Q29IK7 as seed ortholog is 94%.

Group of orthologs #1396. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:90

Q1DJF7              	100.00%		Q29KQ0              	100.00%
Bootstrap support for Q1DJF7 as seed ortholog is 100%.
Bootstrap support for Q29KQ0 as seed ortholog is 98%.

Group of orthologs #1397. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 D.pseudoobscura:4

Q1E5M9              	100.00%		Q29LI3              	100.00%
Bootstrap support for Q1E5M9 as seed ortholog is 100%.
Bootstrap support for Q29LI3 as seed ortholog is 59%.
Alternative seed ortholog is Q29BE2 (4 bits away from this cluster)

Group of orthologs #1398. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:38 D.pseudoobscura:43

J3K062              	100.00%		Q28YK4              	100.00%
                    	       		Q290Q4              	55.58%
                    	       		Q28YK5              	47.50%
                    	       		Q29II8              	30.38%
Bootstrap support for J3K062 as seed ortholog is 84%.
Bootstrap support for Q28YK4 as seed ortholog is 87%.

Group of orthologs #1399. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:44

J3K384              	100.00%		B5E0C5              	100.00%
                    	       		B5E102              	31.00%
                    	       		B5E105              	31.00%
Bootstrap support for J3K384 as seed ortholog is 87%.
Bootstrap support for B5E0C5 as seed ortholog is 98%.

Group of orthologs #1400. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:151

J3KJA1              	100.00%		Q29M64              	100.00%
                    	       		Q297M0              	16.88%
Bootstrap support for J3KJA1 as seed ortholog is 100%.
Bootstrap support for Q29M64 as seed ortholog is 100%.

Group of orthologs #1401. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:151

J0HDY1              	100.00%		Q29NM8              	100.00%
Bootstrap support for J0HDY1 as seed ortholog is 100%.
Bootstrap support for Q29NM8 as seed ortholog is 100%.

Group of orthologs #1402. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:151

J3KJR4              	100.00%		Q28YK0              	100.00%
Bootstrap support for J3KJR4 as seed ortholog is 100%.
Bootstrap support for Q28YK0 as seed ortholog is 100%.

Group of orthologs #1403. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:151

J3K8H9              	100.00%		Q29GB0              	100.00%
Bootstrap support for J3K8H9 as seed ortholog is 100%.
Bootstrap support for Q29GB0 as seed ortholog is 100%.

Group of orthologs #1404. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:151

J3KHW7              	100.00%		Q29IC7              	100.00%
Bootstrap support for J3KHW7 as seed ortholog is 100%.
Bootstrap support for Q29IC7 as seed ortholog is 100%.

Group of orthologs #1405. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 D.pseudoobscura:151

J3KHT1              	100.00%		Q2M084              	100.00%
Bootstrap support for J3KHT1 as seed ortholog is 100%.
Bootstrap support for Q2M084 as seed ortholog is 100%.

Group of orthologs #1406. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 D.pseudoobscura:150

J3K3Y2              	100.00%		Q29LG3              	100.00%
Bootstrap support for J3K3Y2 as seed ortholog is 100%.
Bootstrap support for Q29LG3 as seed ortholog is 100%.

Group of orthologs #1407. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 D.pseudoobscura:150

J3KJQ4              	100.00%		Q29PF6              	100.00%
Bootstrap support for J3KJQ4 as seed ortholog is 100%.
Bootstrap support for Q29PF6 as seed ortholog is 100%.

Group of orthologs #1408. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 D.pseudoobscura:150

J3KL79              	100.00%		Q2LZ71              	100.00%
Bootstrap support for J3KL79 as seed ortholog is 100%.
Bootstrap support for Q2LZ71 as seed ortholog is 100%.

Group of orthologs #1409. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 D.pseudoobscura:149

J3K8X3              	100.00%		Q28X58              	100.00%
Bootstrap support for J3K8X3 as seed ortholog is 100%.
Bootstrap support for Q28X58 as seed ortholog is 100%.

Group of orthologs #1410. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 D.pseudoobscura:149

J3K939              	100.00%		Q28YH8              	100.00%
Bootstrap support for J3K939 as seed ortholog is 100%.
Bootstrap support for Q28YH8 as seed ortholog is 100%.

Group of orthologs #1411. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 D.pseudoobscura:149

J3K2R0              	100.00%		Q298A9              	100.00%
Bootstrap support for J3K2R0 as seed ortholog is 100%.
Bootstrap support for Q298A9 as seed ortholog is 100%.

Group of orthologs #1412. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 D.pseudoobscura:149

J3KLV6              	100.00%		Q28YM1              	100.00%
Bootstrap support for J3KLV6 as seed ortholog is 100%.
Bootstrap support for Q28YM1 as seed ortholog is 100%.

Group of orthologs #1413. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 D.pseudoobscura:149

J3KKZ4              	100.00%		Q29FC9              	100.00%
Bootstrap support for J3KKZ4 as seed ortholog is 100%.
Bootstrap support for Q29FC9 as seed ortholog is 100%.

Group of orthologs #1414. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:149

J3KBD5              	100.00%		Q2LZ84              	100.00%
Bootstrap support for J3KBD5 as seed ortholog is 96%.
Bootstrap support for Q2LZ84 as seed ortholog is 100%.

Group of orthologs #1415. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 D.pseudoobscura:149

J3KKJ6              	100.00%		Q2LYT2              	100.00%
Bootstrap support for J3KKJ6 as seed ortholog is 100%.
Bootstrap support for Q2LYT2 as seed ortholog is 100%.

Group of orthologs #1416. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:104

J3KJX3              	100.00%		Q2LZL7              	100.00%
Bootstrap support for J3KJX3 as seed ortholog is 99%.
Bootstrap support for Q2LZL7 as seed ortholog is 100%.

Group of orthologs #1417. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 D.pseudoobscura:148

J0HE30              	100.00%		I5ANM7              	100.00%
Bootstrap support for J0HE30 as seed ortholog is 100%.
Bootstrap support for I5ANM7 as seed ortholog is 100%.

Group of orthologs #1418. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 D.pseudoobscura:148

J3K092              	100.00%		Q299W6              	100.00%
Bootstrap support for J3K092 as seed ortholog is 100%.
Bootstrap support for Q299W6 as seed ortholog is 100%.

Group of orthologs #1419. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 D.pseudoobscura:148

I9XLY6              	100.00%		Q29FP3              	100.00%
Bootstrap support for I9XLY6 as seed ortholog is 100%.
Bootstrap support for Q29FP3 as seed ortholog is 100%.

Group of orthologs #1420. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:148

J3K9A9              	100.00%		Q296Z9              	100.00%
Bootstrap support for J3K9A9 as seed ortholog is 97%.
Bootstrap support for Q296Z9 as seed ortholog is 100%.

Group of orthologs #1421. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 D.pseudoobscura:91

J3KKQ1              	100.00%		Q29FG4              	100.00%
Bootstrap support for J3KKQ1 as seed ortholog is 100%.
Bootstrap support for Q29FG4 as seed ortholog is 99%.

Group of orthologs #1422. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:147

J3K9E0              	100.00%		Q28XU7              	100.00%
                    	       		Q28XU6              	59.23%
                    	       		B5DYM2              	40.48%
                    	       		Q28YB9              	22.32%
                    	       		B5E056              	22.02%
Bootstrap support for J3K9E0 as seed ortholog is 100%.
Bootstrap support for Q28XU7 as seed ortholog is 100%.

Group of orthologs #1423. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:147

J3K8J3              	100.00%		Q28YH0              	100.00%
Bootstrap support for J3K8J3 as seed ortholog is 100%.
Bootstrap support for Q28YH0 as seed ortholog is 100%.

Group of orthologs #1424. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:147

J3KAL8              	100.00%		Q299Z6              	100.00%
Bootstrap support for J3KAL8 as seed ortholog is 100%.
Bootstrap support for Q299Z6 as seed ortholog is 100%.

Group of orthologs #1425. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:90

J3K1Q3              	100.00%		Q29L16              	100.00%
Bootstrap support for J3K1Q3 as seed ortholog is 100%.
Bootstrap support for Q29L16 as seed ortholog is 99%.

Group of orthologs #1426. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:147

J3KIC5              	100.00%		Q291T1              	100.00%
Bootstrap support for J3KIC5 as seed ortholog is 100%.
Bootstrap support for Q291T1 as seed ortholog is 100%.

Group of orthologs #1427. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:147

J3KES3              	100.00%		Q29F87              	100.00%
Bootstrap support for J3KES3 as seed ortholog is 100%.
Bootstrap support for Q29F87 as seed ortholog is 100%.

Group of orthologs #1428. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 D.pseudoobscura:147

Q1DM35              	100.00%		Q299R9              	100.00%
Bootstrap support for Q1DM35 as seed ortholog is 100%.
Bootstrap support for Q299R9 as seed ortholog is 100%.

Group of orthologs #1429. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 D.pseudoobscura:146

J3KF62              	100.00%		B5DPF3              	100.00%
                    	       		Q294E6              	42.61%
                    	       		B5DWQ2              	37.33%
                    	       		Q29CP1              	5.47%
Bootstrap support for J3KF62 as seed ortholog is 100%.
Bootstrap support for B5DPF3 as seed ortholog is 100%.

Group of orthologs #1430. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 D.pseudoobscura:92

J3K2X8              	100.00%		B5DTH2              	100.00%
Bootstrap support for J3K2X8 as seed ortholog is 100%.
Bootstrap support for B5DTH2 as seed ortholog is 97%.

Group of orthologs #1431. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 D.pseudoobscura:146

I9XM55              	100.00%		Q29AN0              	100.00%
Bootstrap support for I9XM55 as seed ortholog is 100%.
Bootstrap support for Q29AN0 as seed ortholog is 100%.

Group of orthologs #1432. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 D.pseudoobscura:146

J3KJA0              	100.00%		Q290W2              	100.00%
Bootstrap support for J3KJA0 as seed ortholog is 100%.
Bootstrap support for Q290W2 as seed ortholog is 100%.

Group of orthologs #1433. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:146

J3KDT2              	100.00%		Q299S8              	100.00%
Bootstrap support for J3KDT2 as seed ortholog is 99%.
Bootstrap support for Q299S8 as seed ortholog is 100%.

Group of orthologs #1434. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:37 D.pseudoobscura:145

J3K9F8              	100.00%		Q2LZU9              	100.00%
J3KEX6              	100.00%		Q29JL5              	100.00%
J3KGC0              	34.31%		Q292Z0              	17.94%
J3K3C6              	28.17%		Q28X65              	15.90%
J3KKX0              	21.23%		
J3KIP4              	14.29%		
J3KE26              	12.50%		
J3K1Y8              	11.02%		
Bootstrap support for J3K9F8 as seed ortholog is 83%.
Bootstrap support for J3KEX6 as seed ortholog is 76%.
Bootstrap support for Q2LZU9 as seed ortholog is 100%.
Bootstrap support for Q29JL5 as seed ortholog is 100%.

Group of orthologs #1435. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 D.pseudoobscura:145

J3K0I7              	100.00%		Q28XI6              	100.00%
Bootstrap support for J3K0I7 as seed ortholog is 100%.
Bootstrap support for Q28XI6 as seed ortholog is 100%.

Group of orthologs #1436. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 D.pseudoobscura:145

I9NKR1              	100.00%		Q29BR8              	100.00%
Bootstrap support for I9NKR1 as seed ortholog is 100%.
Bootstrap support for Q29BR8 as seed ortholog is 100%.

Group of orthologs #1437. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 D.pseudoobscura:145

J3KLA5              	100.00%		Q28Z58              	100.00%
Bootstrap support for J3KLA5 as seed ortholog is 100%.
Bootstrap support for Q28Z58 as seed ortholog is 100%.

Group of orthologs #1438. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 D.pseudoobscura:145

J3KH05              	100.00%		Q29F38              	100.00%
Bootstrap support for J3KH05 as seed ortholog is 100%.
Bootstrap support for Q29F38 as seed ortholog is 100%.

Group of orthologs #1439. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 D.pseudoobscura:145

J3KH46              	100.00%		Q29GK0              	100.00%
Bootstrap support for J3KH46 as seed ortholog is 100%.
Bootstrap support for Q29GK0 as seed ortholog is 100%.

Group of orthologs #1440. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 D.pseudoobscura:145

J3KJF3              	100.00%		Q29P85              	100.00%
Bootstrap support for J3KJF3 as seed ortholog is 100%.
Bootstrap support for Q29P85 as seed ortholog is 100%.

Group of orthologs #1441. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:74

J3K5I3              	100.00%		Q29D47              	100.00%
                    	       		B5DRH4              	32.92%
                    	       		B5DQZ1              	27.43%
                    	       		Q29FK2              	22.69%
                    	       		B5DJG9              	19.70%
Bootstrap support for J3K5I3 as seed ortholog is 99%.
Bootstrap support for Q29D47 as seed ortholog is 99%.

Group of orthologs #1442. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J3K8M1              	100.00%		B5DXG9              	100.00%
                    	       		B5DM19              	49.09%
Bootstrap support for J3K8M1 as seed ortholog is 100%.
Bootstrap support for B5DXG9 as seed ortholog is 100%.

Group of orthologs #1443. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J3K0L0              	100.00%		B5DZH8              	100.00%
Bootstrap support for J3K0L0 as seed ortholog is 100%.
Bootstrap support for B5DZH8 as seed ortholog is 100%.

Group of orthologs #1444. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J0HG50              	100.00%		Q290H1              	100.00%
Bootstrap support for J0HG50 as seed ortholog is 100%.
Bootstrap support for Q290H1 as seed ortholog is 100%.

Group of orthologs #1445. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J3KAT3              	100.00%		B5E0J8              	100.00%
Bootstrap support for J3KAT3 as seed ortholog is 100%.
Bootstrap support for B5E0J8 as seed ortholog is 100%.

Group of orthologs #1446. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J3K589              	100.00%		Q2LZ36              	100.00%
Bootstrap support for J3K589 as seed ortholog is 100%.
Bootstrap support for Q2LZ36 as seed ortholog is 100%.

Group of orthologs #1447. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J3K876              	100.00%		Q29NK6              	100.00%
Bootstrap support for J3K876 as seed ortholog is 100%.
Bootstrap support for Q29NK6 as seed ortholog is 100%.

Group of orthologs #1448. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 D.pseudoobscura:144

J3KD35              	100.00%		Q29LS8              	100.00%
Bootstrap support for J3KD35 as seed ortholog is 100%.
Bootstrap support for Q29LS8 as seed ortholog is 100%.

Group of orthologs #1449. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:39 D.pseudoobscura:143

J3KHT3              	100.00%		Q28XL2              	100.00%
                    	       		Q2LZN0              	47.59%
                    	       		Q29BY5              	34.10%
                    	       		B5DP18              	32.68%
                    	       		Q299F1              	32.24%
                    	       		Q2LZN1              	31.03%
                    	       		Q28XS4              	23.14%
                    	       		Q29CD2              	19.74%
                    	       		Q28XS3              	19.74%
                    	       		Q29I88              	16.01%
Bootstrap support for J3KHT3 as seed ortholog is 76%.
Bootstrap support for Q28XL2 as seed ortholog is 100%.

Group of orthologs #1450. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:143

J3KLY5              	100.00%		Q29MK9              	100.00%
                    	       		Q29MK8              	24.23%
                    	       		Q29MU7              	18.08%
Bootstrap support for J3KLY5 as seed ortholog is 90%.
Bootstrap support for Q29MK9 as seed ortholog is 100%.

Group of orthologs #1451. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J0HEU4              	100.00%		B5DSB0              	100.00%
Bootstrap support for J0HEU4 as seed ortholog is 100%.
Bootstrap support for B5DSB0 as seed ortholog is 100%.

Group of orthologs #1452. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J0HE12              	100.00%		Q28Y16              	100.00%
Bootstrap support for J0HE12 as seed ortholog is 100%.
Bootstrap support for Q28Y16 as seed ortholog is 100%.

Group of orthologs #1453. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J3K4Q7              	100.00%		P54363              	100.00%
Bootstrap support for J3K4Q7 as seed ortholog is 100%.
Bootstrap support for P54363 as seed ortholog is 100%.

Group of orthologs #1454. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

I9NPW4              	100.00%		Q29MR3              	100.00%
Bootstrap support for I9NPW4 as seed ortholog is 100%.
Bootstrap support for Q29MR3 as seed ortholog is 100%.

Group of orthologs #1455. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:27 D.pseudoobscura:102

J3K2I5              	100.00%		Q29J33              	100.00%
Bootstrap support for J3K2I5 as seed ortholog is 81%.
Bootstrap support for Q29J33 as seed ortholog is 99%.

Group of orthologs #1456. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J3K0F8              	100.00%		Q29NI7              	100.00%
Bootstrap support for J3K0F8 as seed ortholog is 100%.
Bootstrap support for Q29NI7 as seed ortholog is 100%.

Group of orthologs #1457. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J3KK15              	100.00%		Q290C3              	100.00%
Bootstrap support for J3KK15 as seed ortholog is 100%.
Bootstrap support for Q290C3 as seed ortholog is 100%.

Group of orthologs #1458. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J3K6D2              	100.00%		Q29L64              	100.00%
Bootstrap support for J3K6D2 as seed ortholog is 100%.
Bootstrap support for Q29L64 as seed ortholog is 100%.

Group of orthologs #1459. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:66

J3KL44              	100.00%		Q294Q9              	100.00%
Bootstrap support for J3KL44 as seed ortholog is 97%.
Bootstrap support for Q294Q9 as seed ortholog is 93%.

Group of orthologs #1460. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J3K7D3              	100.00%		Q29P96              	100.00%
Bootstrap support for J3K7D3 as seed ortholog is 100%.
Bootstrap support for Q29P96 as seed ortholog is 100%.

Group of orthologs #1461. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

J3K6K8              	100.00%		Q2LZ08              	100.00%
Bootstrap support for J3K6K8 as seed ortholog is 100%.
Bootstrap support for Q2LZ08 as seed ortholog is 100%.

Group of orthologs #1462. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 D.pseudoobscura:143

Q1EAF9              	100.00%		Q2LZZ4              	100.00%
Bootstrap support for Q1EAF9 as seed ortholog is 100%.
Bootstrap support for Q2LZZ4 as seed ortholog is 100%.

Group of orthologs #1463. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:84

J3KBF9              	100.00%		B5DZT2              	100.00%
                    	       		Q29BG6              	65.81%
Bootstrap support for J3KBF9 as seed ortholog is 99%.
Bootstrap support for B5DZT2 as seed ortholog is 99%.

Group of orthologs #1464. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:28

J3KI38              	100.00%		Q29NR5              	100.00%
                    	       		Q29MQ7              	12.55%
Bootstrap support for J3KI38 as seed ortholog is 99%.
Bootstrap support for Q29NR5 as seed ortholog is 83%.

Group of orthologs #1465. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 D.pseudoobscura:58

J3K199              	100.00%		Q28WU9              	100.00%
Bootstrap support for J3K199 as seed ortholog is 100%.
Bootstrap support for Q28WU9 as seed ortholog is 71%.
Alternative seed ortholog is Q29FS7 (58 bits away from this cluster)

Group of orthologs #1466. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 D.pseudoobscura:142

J3K546              	100.00%		Q29P26              	100.00%
Bootstrap support for J3K546 as seed ortholog is 100%.
Bootstrap support for Q29P26 as seed ortholog is 100%.

Group of orthologs #1467. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:25 D.pseudoobscura:45

J3KLG1              	100.00%		Q29H38              	100.00%
Bootstrap support for J3KLG1 as seed ortholog is 75%.
Bootstrap support for Q29H38 as seed ortholog is 89%.

Group of orthologs #1468. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 D.pseudoobscura:9

J3K440              	100.00%		Q28Y61              	100.00%
                    	       		B5E092              	24.52%
                    	       		B5E094              	19.10%
                    	       		B5E093              	17.29%
                    	       		Q28YZ0              	5.97%
Bootstrap support for J3K440 as seed ortholog is 100%.
Bootstrap support for Q28Y61 as seed ortholog is 57%.
Alternative seed ortholog is Q29NB7 (9 bits away from this cluster)

Group of orthologs #1469. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 D.pseudoobscura:141

I9NT45              	100.00%		Q290X2              	100.00%
Bootstrap support for I9NT45 as seed ortholog is 100%.
Bootstrap support for Q290X2 as seed ortholog is 100%.

Group of orthologs #1470. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 D.pseudoobscura:141

J3K333              	100.00%		Q29MW3              	100.00%
Bootstrap support for J3K333 as seed ortholog is 100%.
Bootstrap support for Q29MW3 as seed ortholog is 100%.

Group of orthologs #1471. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:24 D.pseudoobscura:23

J3K9R1              	100.00%		Q29IW6              	100.00%
Bootstrap support for J3K9R1 as seed ortholog is 76%.
Bootstrap support for Q29IW6 as seed ortholog is 75%.

Group of orthologs #1472. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:53

J3KIM2              	100.00%		Q292Y1              	100.00%
                    	       		Q28YD1              	49.72%
                    	       		Q28YD2              	46.79%
                    	       		B5E048              	39.91%
                    	       		B5E049              	39.35%
                    	       		Q28YD8              	37.43%
                    	       		Q28YD6              	37.09%
                    	       		Q28YD4              	36.98%
                    	       		Q28YD7              	34.05%
                    	       		B5DJP8              	20.74%
                    	       		Q292C5              	20.18%
                    	       		Q28WY4              	19.95%
                    	       		Q28YD0              	19.62%
                    	       		Q292C6              	18.83%
                    	       		Q298W4              	17.70%
                    	       		Q29AT3              	17.25%
                    	       		Q291Q4              	16.01%
                    	       		B5E1D0              	14.99%
                    	       		Q29B34              	13.64%
                    	       		Q29GL1              	12.97%
                    	       		B5DJQ6              	12.85%
                    	       		Q292U4              	11.50%
                    	       		Q28XA2              	9.92%
                    	       		B5DNJ0              	8.79%
                    	       		Q28XV3              	8.79%
                    	       		Q292C7              	8.00%
                    	       		Q29M20              	5.07%
Bootstrap support for J3KIM2 as seed ortholog is 91%.
Bootstrap support for Q292Y1 as seed ortholog is 89%.

Group of orthologs #1473. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:28 D.pseudoobscura:140

J3KBN8              	100.00%		Q29D42              	100.00%
Q1DVI3              	11.61%		
J3K1V1              	6.93%		
Bootstrap support for J3KBN8 as seed ortholog is 74%.
Alternative seed ortholog is J3KF60 (28 bits away from this cluster)
Bootstrap support for Q29D42 as seed ortholog is 100%.

Group of orthologs #1474. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 D.pseudoobscura:140

J3K4L8              	100.00%		Q29H00              	100.00%
Bootstrap support for J3K4L8 as seed ortholog is 100%.
Bootstrap support for Q29H00 as seed ortholog is 100%.

Group of orthologs #1475. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 D.pseudoobscura:93

J3KIE6              	100.00%		Q299N5              	100.00%
Bootstrap support for J3KIE6 as seed ortholog is 100%.
Bootstrap support for Q299N5 as seed ortholog is 99%.

Group of orthologs #1476. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 D.pseudoobscura:140

J3KFN1              	100.00%		Q29LP1              	100.00%
Bootstrap support for J3KFN1 as seed ortholog is 100%.
Bootstrap support for Q29LP1 as seed ortholog is 100%.

Group of orthologs #1477. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:35

J3K5L4              	100.00%		B5DLY8              	100.00%
J3K5I2              	23.31%		B5DIR4              	66.57%
J3K5J8              	12.29%		B5DIR9              	15.32%
Bootstrap support for J3K5L4 as seed ortholog is 88%.
Bootstrap support for B5DLY8 as seed ortholog is 77%.

Group of orthologs #1478. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:16

J3K7X5              	100.00%		Q29D46              	100.00%
                    	       		B5DRQ8              	58.09%
                    	       		B5DPU2              	41.91%
                    	       		B5DLF9              	17.65%
Bootstrap support for J3K7X5 as seed ortholog is 95%.
Bootstrap support for Q29D46 as seed ortholog is 73%.
Alternative seed ortholog is Q29KQ1 (16 bits away from this cluster)

Group of orthologs #1479. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 D.pseudoobscura:32

J3K4I2              	100.00%		I5APL5              	100.00%
Bootstrap support for J3K4I2 as seed ortholog is 100%.
Bootstrap support for I5APL5 as seed ortholog is 86%.

Group of orthologs #1480. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 D.pseudoobscura:139

Q1DK38              	100.00%		Q297S9              	100.00%
Bootstrap support for Q1DK38 as seed ortholog is 100%.
Bootstrap support for Q297S9 as seed ortholog is 100%.

Group of orthologs #1481. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 D.pseudoobscura:139

J3K7V9              	100.00%		Q2M0N0              	100.00%
Bootstrap support for J3K7V9 as seed ortholog is 100%.
Bootstrap support for Q2M0N0 as seed ortholog is 100%.

Group of orthologs #1482. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 D.pseudoobscura:139

J3KI09              	100.00%		Q2M0C1              	100.00%
Bootstrap support for J3KI09 as seed ortholog is 100%.
Bootstrap support for Q2M0C1 as seed ortholog is 100%.

Group of orthologs #1483. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:138

Q1DRC9              	100.00%		Q295I4              	100.00%
                    	       		B5E1N0              	20.24%
Bootstrap support for Q1DRC9 as seed ortholog is 100%.
Bootstrap support for Q295I4 as seed ortholog is 100%.

Group of orthologs #1484. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:138

J3KD45              	100.00%		Q28ZP7              	100.00%
Bootstrap support for J3KD45 as seed ortholog is 100%.
Bootstrap support for Q28ZP7 as seed ortholog is 100%.

Group of orthologs #1485. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:138

J3K3G1              	100.00%		Q29J54              	100.00%
Bootstrap support for J3K3G1 as seed ortholog is 100%.
Bootstrap support for Q29J54 as seed ortholog is 100%.

Group of orthologs #1486. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:83

J3KBC7              	100.00%		Q29D10              	100.00%
Bootstrap support for J3KBC7 as seed ortholog is 100%.
Bootstrap support for Q29D10 as seed ortholog is 97%.

Group of orthologs #1487. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:138

J3K6W3              	100.00%		Q29IL9              	100.00%
Bootstrap support for J3K6W3 as seed ortholog is 100%.
Bootstrap support for Q29IL9 as seed ortholog is 100%.

Group of orthologs #1488. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:45

J3K4R7              	100.00%		Q29LK2              	100.00%
Bootstrap support for J3K4R7 as seed ortholog is 99%.
Bootstrap support for Q29LK2 as seed ortholog is 92%.

Group of orthologs #1489. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 D.pseudoobscura:138

J3KEV9              	100.00%		Q29J44              	100.00%
Bootstrap support for J3KEV9 as seed ortholog is 100%.
Bootstrap support for Q29J44 as seed ortholog is 100%.

Group of orthologs #1490. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 D.pseudoobscura:137

J3KH43              	100.00%		B5DXH2              	100.00%
                    	       		Q29CR5              	100.00%
Bootstrap support for J3KH43 as seed ortholog is 100%.
Bootstrap support for B5DXH2 as seed ortholog is 100%.
Bootstrap support for Q29CR5 as seed ortholog is 100%.

Group of orthologs #1491. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:137

J3KCB3              	100.00%		B5DNR0              	100.00%
Bootstrap support for J3KCB3 as seed ortholog is 96%.
Bootstrap support for B5DNR0 as seed ortholog is 100%.

Group of orthologs #1492. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 D.pseudoobscura:137

J3K260              	100.00%		B5E133              	100.00%
Bootstrap support for J3K260 as seed ortholog is 100%.
Bootstrap support for B5E133 as seed ortholog is 100%.

Group of orthologs #1493. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 D.pseudoobscura:137

J3K803              	100.00%		Q29I17              	100.00%
Bootstrap support for J3K803 as seed ortholog is 100%.
Bootstrap support for Q29I17 as seed ortholog is 100%.

Group of orthologs #1494. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 D.pseudoobscura:137

J3KKS0              	100.00%		Q293T4              	100.00%
Bootstrap support for J3KKS0 as seed ortholog is 100%.
Bootstrap support for Q293T4 as seed ortholog is 100%.

Group of orthologs #1495. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:136

J3K0G0              	100.00%		Q2LZY9              	100.00%
                    	       		Q2LYU9              	28.83%
                    	       		Q2LZY8              	27.86%
                    	       		B5DHP7              	27.74%
                    	       		Q29EE4              	23.88%
                    	       		Q293E9              	23.16%
                    	       		B5DZU4              	17.61%
                    	       		Q29HX4              	15.92%
                    	       		Q28WR7              	15.56%
                    	       		Q2LZY7              	14.11%
                    	       		Q29HX3              	12.55%
                    	       		B5DPR4              	10.62%
Bootstrap support for J3K0G0 as seed ortholog is 95%.
Bootstrap support for Q2LZY9 as seed ortholog is 100%.

Group of orthologs #1496. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:40 D.pseudoobscura:48

J3KF35              	100.00%		Q28XC0              	100.00%
J3K3D4              	32.76%		Q29K17              	9.23%
Bootstrap support for J3KF35 as seed ortholog is 99%.
Bootstrap support for Q28XC0 as seed ortholog is 96%.

Group of orthologs #1497. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:26 D.pseudoobscura:15

I9NT56              	100.00%		Q29FC4              	100.00%
J3KJP8              	33.42%		
Bootstrap support for I9NT56 as seed ortholog is 76%.
Bootstrap support for Q29FC4 as seed ortholog is 63%.
Alternative seed ortholog is Q29HP4 (15 bits away from this cluster)

Group of orthologs #1498. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 D.pseudoobscura:136

J0HHE6              	100.00%		B5DMW8              	100.00%
Bootstrap support for J0HHE6 as seed ortholog is 100%.
Bootstrap support for B5DMW8 as seed ortholog is 100%.

Group of orthologs #1499. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 D.pseudoobscura:136

J3K336              	100.00%		Q290N8              	100.00%
Bootstrap support for J3K336 as seed ortholog is 100%.
Bootstrap support for Q290N8 as seed ortholog is 100%.

Group of orthologs #1500. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 D.pseudoobscura:136

J3KF79              	100.00%		B5DTF8              	100.00%
Bootstrap support for J3KF79 as seed ortholog is 100%.
Bootstrap support for B5DTF8 as seed ortholog is 100%.

Group of orthologs #1501. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 D.pseudoobscura:136

J3KAC5              	100.00%		Q29DS0              	100.00%
Bootstrap support for J3KAC5 as seed ortholog is 100%.
Bootstrap support for Q29DS0 as seed ortholog is 100%.

Group of orthologs #1502. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:34

J3KDU2              	100.00%		B5DZ98              	100.00%
J3KGS4              	29.94%		Q292I8              	77.19%
                    	       		B5DZ99              	72.39%
                    	       		Q29NB8              	62.69%
                    	       		Q292I9              	21.54%
                    	       		B5DMG9              	20.90%
                    	       		Q29JM1              	20.68%
                    	       		B5DKF0              	20.58%
                    	       		Q2LYR6              	18.02%
                    	       		Q29CC5              	18.02%
                    	       		B5DKF1              	17.91%
                    	       		Q2M128              	16.84%
                    	       		Q29JD3              	16.42%
                    	       		B5DIP1              	13.33%
                    	       		Q29HS7              	11.62%
                    	       		B5E1E2              	10.66%
                    	       		Q2LZ03              	10.34%
                    	       		B5E1E1              	10.13%
                    	       		B5E1E0              	9.49%
                    	       		Q29HB6              	9.06%
                    	       		B5DKU5              	8.85%
                    	       		Q28WR0              	8.85%
                    	       		B5DIP0              	8.21%
                    	       		B5DVS5              	6.18%
Bootstrap support for J3KDU2 as seed ortholog is 86%.
Bootstrap support for B5DZ98 as seed ortholog is 78%.

Group of orthologs #1503. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 D.pseudoobscura:5

J3KCT6              	100.00%		Q295A6              	100.00%
Bootstrap support for J3KCT6 as seed ortholog is 100%.
Bootstrap support for Q295A6 as seed ortholog is 54%.
Alternative seed ortholog is Q295K5 (5 bits away from this cluster)

Group of orthologs #1504. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 D.pseudoobscura:135

J3KKX4              	100.00%		Q294K8              	100.00%
Bootstrap support for J3KKX4 as seed ortholog is 100%.
Bootstrap support for Q294K8 as seed ortholog is 100%.

Group of orthologs #1505. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 D.pseudoobscura:135

J3KBH7              	100.00%		Q29KE4              	100.00%
Bootstrap support for J3KBH7 as seed ortholog is 100%.
Bootstrap support for Q29KE4 as seed ortholog is 100%.

Group of orthologs #1506. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:134

J3K3B1              	100.00%		Q293N6              	100.00%
J3K954              	52.93%		Q293N5              	44.78%
                    	       		Q293N4              	28.57%
                    	       		Q293N1              	23.05%
                    	       		B5DUC2              	12.85%
Bootstrap support for J3K3B1 as seed ortholog is 100%.
Bootstrap support for Q293N6 as seed ortholog is 100%.

Group of orthologs #1507. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:134

J3K5Z0              	100.00%		Q28XJ6              	100.00%
Bootstrap support for J3K5Z0 as seed ortholog is 100%.
Bootstrap support for Q28XJ6 as seed ortholog is 100%.

Group of orthologs #1508. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:134

J3K1T3              	100.00%		Q29GT2              	100.00%
Bootstrap support for J3K1T3 as seed ortholog is 100%.
Bootstrap support for Q29GT2 as seed ortholog is 100%.

Group of orthologs #1509. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:134

J3K704              	100.00%		Q29BL4              	100.00%
Bootstrap support for J3K704 as seed ortholog is 94%.
Bootstrap support for Q29BL4 as seed ortholog is 100%.

Group of orthologs #1510. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:134

J3KBV1              	100.00%		Q295M3              	100.00%
Bootstrap support for J3KBV1 as seed ortholog is 100%.
Bootstrap support for Q295M3 as seed ortholog is 100%.

Group of orthologs #1511. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:85 D.pseudoobscura:134

J3K548              	100.00%		Q29L30              	100.00%
Bootstrap support for J3K548 as seed ortholog is 94%.
Bootstrap support for Q29L30 as seed ortholog is 100%.

Group of orthologs #1512. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:134

J3KB22              	100.00%		Q29LE0              	100.00%
Bootstrap support for J3KB22 as seed ortholog is 100%.
Bootstrap support for Q29LE0 as seed ortholog is 100%.

Group of orthologs #1513. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:82

J3K941              	100.00%		Q2LZY1              	100.00%
Bootstrap support for J3K941 as seed ortholog is 100%.
Bootstrap support for Q2LZY1 as seed ortholog is 99%.

Group of orthologs #1514. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 D.pseudoobscura:134

J3KMA1              	100.00%		Q2LZI9              	100.00%
Bootstrap support for J3KMA1 as seed ortholog is 100%.
Bootstrap support for Q2LZI9 as seed ortholog is 100%.

Group of orthologs #1515. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3KA90              	100.00%		Q294P0              	100.00%
                    	       		Q294P3              	39.94%
                    	       		Q294P1              	38.99%
                    	       		Q294N5              	34.28%
                    	       		Q294P4              	33.86%
                    	       		B5DWA8              	33.75%
                    	       		Q290I1              	32.70%
                    	       		B5DWA6              	32.39%
                    	       		Q294N6              	25.79%
                    	       		Q294N9              	25.79%
                    	       		B5DWA7              	23.58%
                    	       		Q294N7              	22.96%
                    	       		Q29BQ2              	17.82%
                    	       		B5E041              	17.09%
                    	       		Q29G93              	11.22%
                    	       		Q29DD7              	5.66%
Bootstrap support for J3KA90 as seed ortholog is 100%.
Bootstrap support for Q294P0 as seed ortholog is 100%.

Group of orthologs #1516. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3KEA0              	100.00%		Q29IT8              	100.00%
                    	       		B5DV51              	93.99%
                    	       		Q298M9              	44.26%
                    	       		B5DII6              	21.31%
Bootstrap support for J3KEA0 as seed ortholog is 100%.
Bootstrap support for Q29IT8 as seed ortholog is 100%.

Group of orthologs #1517. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3KJL7              	100.00%		Q29PB0              	100.00%
                    	       		Q29BU0              	14.94%
Bootstrap support for J3KJL7 as seed ortholog is 100%.
Bootstrap support for Q29PB0 as seed ortholog is 100%.

Group of orthologs #1518. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:24 D.pseudoobscura:21

J3K5G9              	100.00%		Q28XN1              	100.00%
Bootstrap support for J3K5G9 as seed ortholog is 81%.
Bootstrap support for Q28XN1 as seed ortholog is 87%.

Group of orthologs #1519. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3KM31              	100.00%		B5E1K4              	100.00%
Bootstrap support for J3KM31 as seed ortholog is 100%.
Bootstrap support for B5E1K4 as seed ortholog is 100%.

Group of orthologs #1520. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3K2Q5              	100.00%		Q2M052              	100.00%
Bootstrap support for J3K2Q5 as seed ortholog is 100%.
Bootstrap support for Q2M052 as seed ortholog is 100%.

Group of orthologs #1521. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3KCT1              	100.00%		Q2M0C0              	100.00%
Bootstrap support for J3KCT1 as seed ortholog is 100%.
Bootstrap support for Q2M0C0 as seed ortholog is 100%.

Group of orthologs #1522. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 D.pseudoobscura:133

J3KE16              	100.00%		Q2M123              	100.00%
Bootstrap support for J3KE16 as seed ortholog is 100%.
Bootstrap support for Q2M123 as seed ortholog is 100%.

Group of orthologs #1523. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 D.pseudoobscura:65

J3KF00              	100.00%		B5DN78              	100.00%
                    	       		B5DIZ5              	80.00%
Bootstrap support for J3KF00 as seed ortholog is 100%.
Bootstrap support for B5DN78 as seed ortholog is 100%.

Group of orthologs #1524. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 D.pseudoobscura:132

J0HGR4              	100.00%		Q293T3              	100.00%
Bootstrap support for J0HGR4 as seed ortholog is 100%.
Bootstrap support for Q293T3 as seed ortholog is 100%.

Group of orthologs #1525. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:132

J3K6B2              	100.00%		Q295J9              	100.00%
Bootstrap support for J3K6B2 as seed ortholog is 85%.
Bootstrap support for Q295J9 as seed ortholog is 100%.

Group of orthologs #1526. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 D.pseudoobscura:132

J3K4L3              	100.00%		Q29JF5              	100.00%
Bootstrap support for J3K4L3 as seed ortholog is 100%.
Bootstrap support for Q29JF5 as seed ortholog is 100%.

Group of orthologs #1527. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 D.pseudoobscura:132

J3K5L8              	100.00%		Q29JV3              	100.00%
Bootstrap support for J3K5L8 as seed ortholog is 100%.
Bootstrap support for Q29JV3 as seed ortholog is 100%.

Group of orthologs #1528. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:32

J3K4E7              	100.00%		Q2LZ18              	100.00%
                    	       		Q29E41              	21.29%
                    	       		Q29E42              	18.36%
                    	       		Q2LZ19              	15.43%
                    	       		B5E0I1              	13.48%
Bootstrap support for J3K4E7 as seed ortholog is 100%.
Bootstrap support for Q2LZ18 as seed ortholog is 80%.

Group of orthologs #1529. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3KL98              	100.00%		B5DWB0              	100.00%
                    	       		B5DVH8              	27.33%
                    	       		Q29JY5              	18.10%
                    	       		Q294N3              	11.26%
Bootstrap support for J3KL98 as seed ortholog is 100%.
Bootstrap support for B5DWB0 as seed ortholog is 100%.

Group of orthologs #1530. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:26

J3KF24              	100.00%		Q29FZ1              	100.00%
J3KAC0              	14.99%		Q29FZ2              	10.51%
Bootstrap support for J3KF24 as seed ortholog is 100%.
Bootstrap support for Q29FZ1 as seed ortholog is 55%.
Alternative seed ortholog is Q29NL9 (26 bits away from this cluster)

Group of orthologs #1531. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

I9NLH7              	100.00%		Q293A5              	100.00%
                    	       		Q29BB2              	33.94%
Bootstrap support for I9NLH7 as seed ortholog is 100%.
Bootstrap support for Q293A5 as seed ortholog is 100%.

Group of orthologs #1532. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:15 D.pseudoobscura:131

J3KDB7              	100.00%		Q297T6              	100.00%
                    	       		B5DWJ2              	17.02%
Bootstrap support for J3KDB7 as seed ortholog is 61%.
Alternative seed ortholog is J3K6D5 (15 bits away from this cluster)
Bootstrap support for Q297T6 as seed ortholog is 100%.

Group of orthologs #1533. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3KJB4              	100.00%		B5DHN1              	100.00%
Bootstrap support for J3KJB4 as seed ortholog is 100%.
Bootstrap support for B5DHN1 as seed ortholog is 100%.

Group of orthologs #1534. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J0HGD4              	100.00%		Q296B8              	100.00%
Bootstrap support for J0HGD4 as seed ortholog is 100%.
Bootstrap support for Q296B8 as seed ortholog is 100%.

Group of orthologs #1535. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3KLH3              	100.00%		B5DVK9              	100.00%
Bootstrap support for J3KLH3 as seed ortholog is 100%.
Bootstrap support for B5DVK9 as seed ortholog is 100%.

Group of orthologs #1536. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3K598              	100.00%		Q29AH9              	100.00%
Bootstrap support for J3K598 as seed ortholog is 100%.
Bootstrap support for Q29AH9 as seed ortholog is 100%.

Group of orthologs #1537. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3KA11              	100.00%		Q29J37              	100.00%
Bootstrap support for J3KA11 as seed ortholog is 100%.
Bootstrap support for Q29J37 as seed ortholog is 100%.

Group of orthologs #1538. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3KAT8              	100.00%		Q29IA5              	100.00%
Bootstrap support for J3KAT8 as seed ortholog is 100%.
Bootstrap support for Q29IA5 as seed ortholog is 100%.

Group of orthologs #1539. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:131

J3KLG8              	100.00%		Q29P72              	100.00%
Bootstrap support for J3KLG8 as seed ortholog is 100%.
Bootstrap support for Q29P72 as seed ortholog is 100%.

Group of orthologs #1540. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 D.pseudoobscura:22

J3KLC0              	100.00%		Q2LZY0              	100.00%
Bootstrap support for J3KLC0 as seed ortholog is 100%.
Bootstrap support for Q2LZY0 as seed ortholog is 84%.

Group of orthologs #1541. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:130

J3K6S0              	100.00%		B5DZV9              	100.00%
J3KHJ0              	28.31%		Q28YP4              	45.42%
J3KM12              	16.08%		Q28ZW2              	40.38%
I9NS28              	11.83%		Q28ZW3              	27.23%
J3K2Y9              	8.80%		Q28ZW4              	24.77%
J3KCB0              	7.38%		B5DPM0              	5.28%
Bootstrap support for J3K6S0 as seed ortholog is 87%.
Bootstrap support for B5DZV9 as seed ortholog is 100%.

Group of orthologs #1542. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 D.pseudoobscura:130

J3KGE5              	100.00%		Q292E2              	100.00%
                    	       		Q296H4              	23.01%
                    	       		Q29BR1              	18.17%
Bootstrap support for J3KGE5 as seed ortholog is 100%.
Bootstrap support for Q292E2 as seed ortholog is 100%.

Group of orthologs #1543. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 D.pseudoobscura:130

J3K8E1              	100.00%		B5DYV2              	100.00%
                    	       		B5DRB9              	87.38%
Bootstrap support for J3K8E1 as seed ortholog is 100%.
Bootstrap support for B5DYV2 as seed ortholog is 100%.

Group of orthologs #1544. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 D.pseudoobscura:130

J0HF21              	100.00%		Q29BT5              	100.00%
Bootstrap support for J0HF21 as seed ortholog is 100%.
Bootstrap support for Q29BT5 as seed ortholog is 100%.

Group of orthologs #1545. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 D.pseudoobscura:130

J3K2S3              	100.00%		Q29H98              	100.00%
Bootstrap support for J3K2S3 as seed ortholog is 100%.
Bootstrap support for Q29H98 as seed ortholog is 100%.

Group of orthologs #1546. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 D.pseudoobscura:130

J3K3D3              	100.00%		Q29K45              	100.00%
Bootstrap support for J3K3D3 as seed ortholog is 100%.
Bootstrap support for Q29K45 as seed ortholog is 100%.

Group of orthologs #1547. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 D.pseudoobscura:38

I9XL65              	100.00%		B5DNF9              	100.00%
                    	       		B5DY38              	92.47%
Bootstrap support for I9XL65 as seed ortholog is 100%.
Bootstrap support for B5DNF9 as seed ortholog is 99%.

Group of orthologs #1548. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:73

I9NQB0              	100.00%		Q295B2              	100.00%
                    	       		B5DVX0              	73.48%
Bootstrap support for I9NQB0 as seed ortholog is 97%.
Bootstrap support for Q295B2 as seed ortholog is 98%.

Group of orthologs #1549. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 D.pseudoobscura:129

J3K4B2              	100.00%		Q295N0              	100.00%
Bootstrap support for J3K4B2 as seed ortholog is 100%.
Bootstrap support for Q295N0 as seed ortholog is 100%.

Group of orthologs #1550. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 D.pseudoobscura:129

J3KCS2              	100.00%		Q28ZN2              	100.00%
Bootstrap support for J3KCS2 as seed ortholog is 100%.
Bootstrap support for Q28ZN2 as seed ortholog is 100%.

Group of orthologs #1551. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 D.pseudoobscura:129

J3KF89              	100.00%		Q29F46              	100.00%
Bootstrap support for J3KF89 as seed ortholog is 100%.
Bootstrap support for Q29F46 as seed ortholog is 100%.

Group of orthologs #1552. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 D.pseudoobscura:129

J3KGI2              	100.00%		Q29FT5              	100.00%
Bootstrap support for J3KGI2 as seed ortholog is 100%.
Bootstrap support for Q29FT5 as seed ortholog is 100%.

Group of orthologs #1553. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 D.pseudoobscura:129

J3KK30              	100.00%		Q29IV5              	100.00%
Bootstrap support for J3KK30 as seed ortholog is 100%.
Bootstrap support for Q29IV5 as seed ortholog is 100%.

Group of orthologs #1554. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:128

J3KBV4              	100.00%		B5DNA4              	100.00%
                    	       		Q29GQ3              	48.70%
                    	       		B5DRC5              	39.83%
                    	       		B5DYH5              	26.96%
                    	       		B5E0V4              	26.96%
                    	       		B5DYH4              	25.39%
Bootstrap support for J3KBV4 as seed ortholog is 100%.
Bootstrap support for B5DNA4 as seed ortholog is 100%.

Group of orthologs #1555. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:128

J3KG90              	100.00%		B5DZ86              	100.00%
                    	       		Q28WT2              	23.09%
                    	       		B5DZ85              	22.27%
                    	       		P25727              	8.00%
                    	       		P25726              	6.91%
                    	       		P25725              	6.00%
Bootstrap support for J3KG90 as seed ortholog is 100%.
Bootstrap support for B5DZ86 as seed ortholog is 100%.

Group of orthologs #1556. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:17

J3KLH9              	100.00%		B5DL47              	100.00%
                    	       		B5DJU0              	5.72%
Bootstrap support for J3KLH9 as seed ortholog is 100%.
Bootstrap support for B5DL47 as seed ortholog is 66%.
Alternative seed ortholog is I5AP32 (17 bits away from this cluster)

Group of orthologs #1557. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:128

J3KFB6              	100.00%		B5DRB3              	100.00%
Bootstrap support for J3KFB6 as seed ortholog is 100%.
Bootstrap support for B5DRB3 as seed ortholog is 100%.

Group of orthologs #1558. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:128

J3KAZ3              	100.00%		Q29B08              	100.00%
Bootstrap support for J3KAZ3 as seed ortholog is 87%.
Bootstrap support for Q29B08 as seed ortholog is 100%.

Group of orthologs #1559. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:40

J3KAJ4              	100.00%		Q29GX3              	100.00%
Bootstrap support for J3KAJ4 as seed ortholog is 97%.
Bootstrap support for Q29GX3 as seed ortholog is 85%.

Group of orthologs #1560. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:128

J3KCJ8              	100.00%		Q29JJ7              	100.00%
Bootstrap support for J3KCJ8 as seed ortholog is 100%.
Bootstrap support for Q29JJ7 as seed ortholog is 100%.

Group of orthologs #1561. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:82

J3KIC2              	100.00%		Q29FI5              	100.00%
Bootstrap support for J3KIC2 as seed ortholog is 100%.
Bootstrap support for Q29FI5 as seed ortholog is 100%.

Group of orthologs #1562. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:5

J3KHD0              	100.00%		Q29MF5              	100.00%
Bootstrap support for J3KHD0 as seed ortholog is 69%.
Alternative seed ortholog is J3K455 (46 bits away from this cluster)
Bootstrap support for Q29MF5 as seed ortholog is 66%.
Alternative seed ortholog is Q2LYN3 (5 bits away from this cluster)

Group of orthologs #1563. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 D.pseudoobscura:128

J3KLR4              	100.00%		Q29JX5              	100.00%
Bootstrap support for J3KLR4 as seed ortholog is 100%.
Bootstrap support for Q29JX5 as seed ortholog is 100%.

Group of orthologs #1564. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

J3KFY0              	100.00%		Q29BT4              	100.00%
                    	       		Q29A90              	14.32%
Bootstrap support for J3KFY0 as seed ortholog is 100%.
Bootstrap support for Q29BT4 as seed ortholog is 100%.

Group of orthologs #1565. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

J3KHZ1              	100.00%		Q29H37              	100.00%
                    	       		Q29PF8              	6.33%
Bootstrap support for J3KHZ1 as seed ortholog is 100%.
Bootstrap support for Q29H37 as seed ortholog is 100%.

Group of orthologs #1566. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

I9NQG8              	100.00%		Q29AE8              	100.00%
Bootstrap support for I9NQG8 as seed ortholog is 100%.
Bootstrap support for Q29AE8 as seed ortholog is 100%.

Group of orthologs #1567. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:51

J3K3M3              	100.00%		Q29B68              	100.00%
Bootstrap support for J3K3M3 as seed ortholog is 99%.
Bootstrap support for Q29B68 as seed ortholog is 96%.

Group of orthologs #1568. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

J3KAU1              	100.00%		Q291F8              	100.00%
Bootstrap support for J3KAU1 as seed ortholog is 100%.
Bootstrap support for Q291F8 as seed ortholog is 100%.

Group of orthologs #1569. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

J3KE51              	100.00%		Q291T0              	100.00%
Bootstrap support for J3KE51 as seed ortholog is 100%.
Bootstrap support for Q291T0 as seed ortholog is 100%.

Group of orthologs #1570. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

J3KCT5              	100.00%		Q296L8              	100.00%
Bootstrap support for J3KCT5 as seed ortholog is 100%.
Bootstrap support for Q296L8 as seed ortholog is 100%.

Group of orthologs #1571. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 D.pseudoobscura:127

J3KDZ9              	100.00%		Q298N3              	100.00%
Bootstrap support for J3KDZ9 as seed ortholog is 100%.
Bootstrap support for Q298N3 as seed ortholog is 100%.

Group of orthologs #1572. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:7 D.pseudoobscura:12

J3K8V0              	100.00%		Q297M5              	100.00%
J3KEE7              	25.07%		Q297M6              	75.54%
                    	       		B5DWF7              	63.71%
Bootstrap support for J3K8V0 as seed ortholog is 59%.
Alternative seed ortholog is J3K026 (7 bits away from this cluster)
Bootstrap support for Q297M5 as seed ortholog is 63%.
Alternative seed ortholog is Q29HP4 (12 bits away from this cluster)

Group of orthologs #1573. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:25 D.pseudoobscura:126

J3KBS4              	100.00%		Q2M096              	100.00%
                    	       		Q2M097              	39.18%
                    	       		B5DLS8              	37.50%
                    	       		Q2LZD6              	36.74%
Bootstrap support for J3KBS4 as seed ortholog is 70%.
Alternative seed ortholog is J0HDW5 (25 bits away from this cluster)
Bootstrap support for Q2M096 as seed ortholog is 100%.

Group of orthologs #1574. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:42

J3KGZ8              	100.00%		B5DWP4              	100.00%
                    	       		B5DR49              	89.11%
                    	       		B5DMF7              	83.17%
Bootstrap support for J3KGZ8 as seed ortholog is 100%.
Bootstrap support for B5DWP4 as seed ortholog is 98%.

Group of orthologs #1575. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

J3K913              	100.00%		B5DX96              	100.00%
Bootstrap support for J3K913 as seed ortholog is 100%.
Bootstrap support for B5DX96 as seed ortholog is 100%.

Group of orthologs #1576. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

J3K148              	100.00%		Q28ZW6              	100.00%
Bootstrap support for J3K148 as seed ortholog is 100%.
Bootstrap support for Q28ZW6 as seed ortholog is 100%.

Group of orthologs #1577. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

J3K1W8              	100.00%		Q29I12              	100.00%
Bootstrap support for J3K1W8 as seed ortholog is 100%.
Bootstrap support for Q29I12 as seed ortholog is 100%.

Group of orthologs #1578. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

I9NP63              	100.00%		Q2M0Y3              	100.00%
Bootstrap support for I9NP63 as seed ortholog is 100%.
Bootstrap support for Q2M0Y3 as seed ortholog is 100%.

Group of orthologs #1579. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

J3K3Q4              	100.00%		Q29MN1              	100.00%
Bootstrap support for J3K3Q4 as seed ortholog is 100%.
Bootstrap support for Q29MN1 as seed ortholog is 100%.

Group of orthologs #1580. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

J3K5T0              	100.00%		Q2LZA9              	100.00%
Bootstrap support for J3K5T0 as seed ortholog is 100%.
Bootstrap support for Q2LZA9 as seed ortholog is 100%.

Group of orthologs #1581. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:62

J3K8X9              	100.00%		Q29NL5              	100.00%
Bootstrap support for J3K8X9 as seed ortholog is 99%.
Bootstrap support for Q29NL5 as seed ortholog is 97%.

Group of orthologs #1582. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 D.pseudoobscura:126

J3KM81              	100.00%		Q2LZM6              	100.00%
Bootstrap support for J3KM81 as seed ortholog is 100%.
Bootstrap support for Q2LZM6 as seed ortholog is 100%.

Group of orthologs #1583. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:125

J3K905              	100.00%		B5DL57              	100.00%
Bootstrap support for J3K905 as seed ortholog is 97%.
Bootstrap support for B5DL57 as seed ortholog is 100%.

Group of orthologs #1584. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 D.pseudoobscura:125

J3KDI4              	100.00%		Q28XR7              	100.00%
Bootstrap support for J3KDI4 as seed ortholog is 100%.
Bootstrap support for Q28XR7 as seed ortholog is 100%.

Group of orthologs #1585. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 D.pseudoobscura:125

J3K439              	100.00%		Q29MR4              	100.00%
Bootstrap support for J3K439 as seed ortholog is 100%.
Bootstrap support for Q29MR4 as seed ortholog is 100%.

Group of orthologs #1586. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 D.pseudoobscura:125

J3KI85              	100.00%		Q29GW1              	100.00%
Bootstrap support for J3KI85 as seed ortholog is 100%.
Bootstrap support for Q29GW1 as seed ortholog is 100%.

Group of orthologs #1587. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:124

J3K9M2              	100.00%		Q29HJ5              	100.00%
                    	       		B5DXF5              	34.24%
Bootstrap support for J3K9M2 as seed ortholog is 100%.
Bootstrap support for Q29HJ5 as seed ortholog is 100%.

Group of orthologs #1588. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:124

J3K2Q4              	100.00%		Q291B6              	100.00%
Bootstrap support for J3K2Q4 as seed ortholog is 100%.
Bootstrap support for Q291B6 as seed ortholog is 100%.

Group of orthologs #1589. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:2 D.pseudoobscura:124

J3K909              	100.00%		Q28WX2              	100.00%
Bootstrap support for J3K909 as seed ortholog is 57%.
Alternative seed ortholog is J3K7D8 (2 bits away from this cluster)
Bootstrap support for Q28WX2 as seed ortholog is 100%.

Group of orthologs #1590. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:124

J3KEZ0              	100.00%		Q290S4              	100.00%
Bootstrap support for J3KEZ0 as seed ortholog is 100%.
Bootstrap support for Q290S4 as seed ortholog is 100%.

Group of orthologs #1591. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 D.pseudoobscura:124

J3KDE0              	100.00%		Q29BK9              	100.00%
Bootstrap support for J3KDE0 as seed ortholog is 100%.
Bootstrap support for Q29BK9 as seed ortholog is 100%.

Group of orthologs #1592. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:123

I9NQB5              	100.00%		B5DPT4              	100.00%
                    	       		Q29A69              	63.26%
                    	       		Q298M7              	38.55%
Bootstrap support for I9NQB5 as seed ortholog is 100%.
Bootstrap support for B5DPT4 as seed ortholog is 100%.

Group of orthologs #1593. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:123

J3KFF7              	100.00%		Q29KB0              	100.00%
                    	       		Q29G75              	15.34%
                    	       		Q29FF5              	9.19%
Bootstrap support for J3KFF7 as seed ortholog is 88%.
Bootstrap support for Q29KB0 as seed ortholog is 100%.

Group of orthologs #1594. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:16 D.pseudoobscura:47

J3KA24              	100.00%		Q29HN2              	100.00%
                    	       		Q28XP5              	19.87%
Bootstrap support for J3KA24 as seed ortholog is 69%.
Alternative seed ortholog is J3K8Z9 (16 bits away from this cluster)
Bootstrap support for Q29HN2 as seed ortholog is 95%.

Group of orthologs #1595. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:20

J3K529              	100.00%		Q299A8              	100.00%
Bootstrap support for J3K529 as seed ortholog is 100%.
Bootstrap support for Q299A8 as seed ortholog is 82%.

Group of orthologs #1596. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:123

J3KKH8              	100.00%		Q293S9              	100.00%
Bootstrap support for J3KKH8 as seed ortholog is 100%.
Bootstrap support for Q293S9 as seed ortholog is 100%.

Group of orthologs #1597. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:123

J3KDI5              	100.00%		Q29IT3              	100.00%
Bootstrap support for J3KDI5 as seed ortholog is 100%.
Bootstrap support for Q29IT3 as seed ortholog is 100%.

Group of orthologs #1598. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 D.pseudoobscura:123

J3KGA7              	100.00%		Q29HA7              	100.00%
Bootstrap support for J3KGA7 as seed ortholog is 100%.
Bootstrap support for Q29HA7 as seed ortholog is 100%.

Group of orthologs #1599. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:50

J3K0V4              	100.00%		Q295E5              	100.00%
Bootstrap support for J3K0V4 as seed ortholog is 100%.
Bootstrap support for Q295E5 as seed ortholog is 97%.

Group of orthologs #1600. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:39

J3K112              	100.00%		Q296F0              	100.00%
Bootstrap support for J3K112 as seed ortholog is 100%.
Bootstrap support for Q296F0 as seed ortholog is 87%.

Group of orthologs #1601. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:122

J3KFM7              	100.00%		Q294B7              	100.00%
Bootstrap support for J3KFM7 as seed ortholog is 100%.
Bootstrap support for Q294B7 as seed ortholog is 100%.

Group of orthologs #1602. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:36 D.pseudoobscura:122

J3KAZ9              	100.00%		Q2LZZ0              	100.00%
Bootstrap support for J3KAZ9 as seed ortholog is 78%.
Bootstrap support for Q2LZZ0 as seed ortholog is 100%.

Group of orthologs #1603. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 D.pseudoobscura:122

J3KJD6              	100.00%		Q2M0N7              	100.00%
Bootstrap support for J3KJD6 as seed ortholog is 100%.
Bootstrap support for Q2M0N7 as seed ortholog is 100%.

Group of orthologs #1604. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:121

J3KHT5              	100.00%		Q29MJ0              	100.00%
J3K9M4              	39.47%		
Bootstrap support for J3KHT5 as seed ortholog is 95%.
Bootstrap support for Q29MJ0 as seed ortholog is 100%.

Group of orthologs #1605. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 D.pseudoobscura:121

J3K0V8              	100.00%		Q28YL0              	100.00%
Bootstrap support for J3K0V8 as seed ortholog is 100%.
Bootstrap support for Q28YL0 as seed ortholog is 100%.

Group of orthologs #1606. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 D.pseudoobscura:121

J3K3C0              	100.00%		Q292N5              	100.00%
Bootstrap support for J3K3C0 as seed ortholog is 100%.
Bootstrap support for Q292N5 as seed ortholog is 100%.

Group of orthologs #1607. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 D.pseudoobscura:121

J3K6B3              	100.00%		Q29AK1              	100.00%
Bootstrap support for J3K6B3 as seed ortholog is 100%.
Bootstrap support for Q29AK1 as seed ortholog is 100%.

Group of orthologs #1608. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 D.pseudoobscura:121

Q1EBD3              	100.00%		Q29FC6              	100.00%
Bootstrap support for Q1EBD3 as seed ortholog is 100%.
Bootstrap support for Q29FC6 as seed ortholog is 100%.

Group of orthologs #1609. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 D.pseudoobscura:120

J0HDM8              	100.00%		I7M3J1              	100.00%
Bootstrap support for J0HDM8 as seed ortholog is 100%.
Bootstrap support for I7M3J1 as seed ortholog is 100%.

Group of orthologs #1610. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 D.pseudoobscura:13

J3K571              	100.00%		Q28Y83              	100.00%
Bootstrap support for J3K571 as seed ortholog is 100%.
Bootstrap support for Q28Y83 as seed ortholog is 95%.

Group of orthologs #1611. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 D.pseudoobscura:120

J3KC92              	100.00%		Q29BL9              	100.00%
Bootstrap support for J3KC92 as seed ortholog is 100%.
Bootstrap support for Q29BL9 as seed ortholog is 100%.

Group of orthologs #1612. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:39 D.pseudoobscura:42

J3KC46              	100.00%		Q29JC7              	100.00%
Bootstrap support for J3KC46 as seed ortholog is 52%.
Alternative seed ortholog is J3K2J8 (39 bits away from this cluster)
Bootstrap support for Q29JC7 as seed ortholog is 54%.
Alternative seed ortholog is Q29I81 (42 bits away from this cluster)

Group of orthologs #1613. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:70 D.pseudoobscura:120

J3KE09              	100.00%		Q29KH8              	100.00%
Bootstrap support for J3KE09 as seed ortholog is 96%.
Bootstrap support for Q29KH8 as seed ortholog is 100%.

Group of orthologs #1614. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:119

J3KE23              	100.00%		Q29IM4              	100.00%
                    	       		Q293R1              	12.99%
                    	       		B5DL72              	12.03%
                    	       		Q293R0              	7.46%
                    	       		Q29JB1              	5.97%
Bootstrap support for J3KE23 as seed ortholog is 91%.
Bootstrap support for Q29IM4 as seed ortholog is 100%.

Group of orthologs #1615. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3KE00              	100.00%		B5DV76              	100.00%
                    	       		Q29P94              	100.00%
                    	       		B5DNM6              	14.52%
Bootstrap support for J3KE00 as seed ortholog is 100%.
Bootstrap support for B5DV76 as seed ortholog is 100%.
Bootstrap support for Q29P94 as seed ortholog is 100%.

Group of orthologs #1616. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:57

J3KE59              	100.00%		Q294P2              	100.00%
                    	       		B5DM07              	49.51%
Bootstrap support for J3KE59 as seed ortholog is 100%.
Bootstrap support for Q294P2 as seed ortholog is 98%.

Group of orthologs #1617. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3KHS0              	100.00%		Q29FY6              	100.00%
                    	       		Q291H0              	33.02%
Bootstrap support for J3KHS0 as seed ortholog is 100%.
Bootstrap support for Q29FY6 as seed ortholog is 100%.

Group of orthologs #1618. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3K2T3              	100.00%		Q293X1              	100.00%
Bootstrap support for J3K2T3 as seed ortholog is 100%.
Bootstrap support for Q293X1 as seed ortholog is 100%.

Group of orthologs #1619. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3K8C8              	100.00%		Q28ZY1              	100.00%
Bootstrap support for J3K8C8 as seed ortholog is 100%.
Bootstrap support for Q28ZY1 as seed ortholog is 100%.

Group of orthologs #1620. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3K2N7              	100.00%		Q29A39              	100.00%
Bootstrap support for J3K2N7 as seed ortholog is 100%.
Bootstrap support for Q29A39 as seed ortholog is 100%.

Group of orthologs #1621. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3K581              	100.00%		Q297N0              	100.00%
Bootstrap support for J3K581 as seed ortholog is 100%.
Bootstrap support for Q297N0 as seed ortholog is 100%.

Group of orthologs #1622. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3KFH5              	100.00%		Q28ZS1              	100.00%
Bootstrap support for J3KFH5 as seed ortholog is 100%.
Bootstrap support for Q28ZS1 as seed ortholog is 100%.

Group of orthologs #1623. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3KGX4              	100.00%		Q29BS2              	100.00%
Bootstrap support for J3KGX4 as seed ortholog is 100%.
Bootstrap support for Q29BS2 as seed ortholog is 100%.

Group of orthologs #1624. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 D.pseudoobscura:119

J3KDE1              	100.00%		Q29GF6              	100.00%
Bootstrap support for J3KDE1 as seed ortholog is 100%.
Bootstrap support for Q29GF6 as seed ortholog is 100%.

Group of orthologs #1625. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KC22              	100.00%		Q2M0X7              	100.00%
                    	       		B5DPZ5              	33.27%
                    	       		Q2LZ56              	24.57%
                    	       		Q2M0X8              	6.62%
Bootstrap support for J3KC22 as seed ortholog is 100%.
Bootstrap support for Q2M0X7 as seed ortholog is 100%.

Group of orthologs #1626. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KE83              	100.00%		B5DX54              	100.00%
                    	       		B5DYD5              	68.18%
Bootstrap support for J3KE83 as seed ortholog is 100%.
Bootstrap support for B5DX54 as seed ortholog is 100%.

Group of orthologs #1627. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KE02              	100.00%		Q290B5              	100.00%
Bootstrap support for J3KE02 as seed ortholog is 100%.
Bootstrap support for Q290B5 as seed ortholog is 100%.

Group of orthologs #1628. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KFL9              	100.00%		Q28ZI3              	100.00%
Bootstrap support for J3KFL9 as seed ortholog is 100%.
Bootstrap support for Q28ZI3 as seed ortholog is 100%.

Group of orthologs #1629. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KCB6              	100.00%		Q294W4              	100.00%
Bootstrap support for J3KCB6 as seed ortholog is 100%.
Bootstrap support for Q294W4 as seed ortholog is 100%.

Group of orthologs #1630. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3K4I1              	100.00%		Q29J64              	100.00%
Bootstrap support for J3K4I1 as seed ortholog is 100%.
Bootstrap support for Q29J64 as seed ortholog is 100%.

Group of orthologs #1631. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KHZ9              	100.00%		Q299B2              	100.00%
Bootstrap support for J3KHZ9 as seed ortholog is 100%.
Bootstrap support for Q299B2 as seed ortholog is 100%.

Group of orthologs #1632. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KF78              	100.00%		Q29LU0              	100.00%
Bootstrap support for J3KF78 as seed ortholog is 100%.
Bootstrap support for Q29LU0 as seed ortholog is 100%.

Group of orthologs #1633. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 D.pseudoobscura:118

J3KL92              	100.00%		Q29GT9              	100.00%
Bootstrap support for J3KL92 as seed ortholog is 100%.
Bootstrap support for Q29GT9 as seed ortholog is 100%.

Group of orthologs #1634. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3KKT1              	100.00%		B5E1G9              	100.00%
                    	       		B5DZV0              	51.91%
Bootstrap support for J3KKT1 as seed ortholog is 100%.
Bootstrap support for B5E1G9 as seed ortholog is 100%.

Group of orthologs #1635. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J0HE21              	100.00%		Q296G4              	100.00%
Bootstrap support for J0HE21 as seed ortholog is 100%.
Bootstrap support for Q296G4 as seed ortholog is 100%.

Group of orthologs #1636. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:117

J3K8V9              	100.00%		B5DZD7              	100.00%
Bootstrap support for J3K8V9 as seed ortholog is 98%.
Bootstrap support for B5DZD7 as seed ortholog is 100%.

Group of orthologs #1637. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3K6W2              	100.00%		Q28XT6              	100.00%
Bootstrap support for J3K6W2 as seed ortholog is 100%.
Bootstrap support for Q28XT6 as seed ortholog is 100%.

Group of orthologs #1638. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3K5Q5              	100.00%		Q28Z98              	100.00%
Bootstrap support for J3K5Q5 as seed ortholog is 100%.
Bootstrap support for Q28Z98 as seed ortholog is 100%.

Group of orthologs #1639. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3K0M1              	100.00%		Q299F9              	100.00%
Bootstrap support for J3K0M1 as seed ortholog is 100%.
Bootstrap support for Q299F9 as seed ortholog is 100%.

Group of orthologs #1640. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3KL89              	100.00%		B5DS37              	100.00%
Bootstrap support for J3KL89 as seed ortholog is 100%.
Bootstrap support for B5DS37 as seed ortholog is 100%.

Group of orthologs #1641. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

I9NST2              	100.00%		Q29H32              	100.00%
Bootstrap support for I9NST2 as seed ortholog is 100%.
Bootstrap support for Q29H32 as seed ortholog is 100%.

Group of orthologs #1642. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3K685              	100.00%		Q297A7              	100.00%
Bootstrap support for J3K685 as seed ortholog is 100%.
Bootstrap support for Q297A7 as seed ortholog is 100%.

Group of orthologs #1643. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3KD21              	100.00%		Q291J3              	100.00%
Bootstrap support for J3KD21 as seed ortholog is 100%.
Bootstrap support for Q291J3 as seed ortholog is 100%.

Group of orthologs #1644. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:1

J3K466              	100.00%		Q29IC3              	100.00%
Bootstrap support for J3K466 as seed ortholog is 100%.
Bootstrap support for Q29IC3 as seed ortholog is 56%.
Alternative seed ortholog is Q295D0 (1 bits away from this cluster)

Group of orthologs #1645. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3KEI7              	100.00%		Q29HY2              	100.00%
Bootstrap support for J3KEI7 as seed ortholog is 100%.
Bootstrap support for Q29HY2 as seed ortholog is 100%.

Group of orthologs #1646. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 D.pseudoobscura:117

J3KD12              	100.00%		Q29N41              	100.00%
Bootstrap support for J3KD12 as seed ortholog is 100%.
Bootstrap support for Q29N41 as seed ortholog is 100%.

Group of orthologs #1647. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:31

J3K2D6              	100.00%		B5DZH7              	100.00%
Bootstrap support for J3K2D6 as seed ortholog is 100%.
Bootstrap support for B5DZH7 as seed ortholog is 76%.

Group of orthologs #1648. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3K9A3              	100.00%		B5E0G6              	100.00%
Bootstrap support for J3K9A3 as seed ortholog is 100%.
Bootstrap support for B5E0G6 as seed ortholog is 100%.

Group of orthologs #1649. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3K2S9              	100.00%		Q294D9              	100.00%
Bootstrap support for J3K2S9 as seed ortholog is 100%.
Bootstrap support for Q294D9 as seed ortholog is 100%.

Group of orthologs #1650. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3K0F9              	100.00%		Q298E6              	100.00%
Bootstrap support for J3K0F9 as seed ortholog is 100%.
Bootstrap support for Q298E6 as seed ortholog is 100%.

Group of orthologs #1651. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:64

J3KE57              	100.00%		Q28ZB8              	100.00%
Bootstrap support for J3KE57 as seed ortholog is 100%.
Bootstrap support for Q28ZB8 as seed ortholog is 99%.

Group of orthologs #1652. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3K9L3              	100.00%		Q29AU5              	100.00%
Bootstrap support for J3K9L3 as seed ortholog is 100%.
Bootstrap support for Q29AU5 as seed ortholog is 100%.

Group of orthologs #1653. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3KFD4              	100.00%		Q294H5              	100.00%
Bootstrap support for J3KFD4 as seed ortholog is 100%.
Bootstrap support for Q294H5 as seed ortholog is 100%.

Group of orthologs #1654. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3K886              	100.00%		Q29HI8              	100.00%
Bootstrap support for J3K886 as seed ortholog is 100%.
Bootstrap support for Q29HI8 as seed ortholog is 100%.

Group of orthologs #1655. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3KHB9              	100.00%		Q298E0              	100.00%
Bootstrap support for J3KHB9 as seed ortholog is 100%.
Bootstrap support for Q298E0 as seed ortholog is 100%.

Group of orthologs #1656. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3KDB4              	100.00%		Q29IU9              	100.00%
Bootstrap support for J3KDB4 as seed ortholog is 100%.
Bootstrap support for Q29IU9 as seed ortholog is 100%.

Group of orthologs #1657. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 D.pseudoobscura:116

J3KLS5              	100.00%		Q29DZ3              	100.00%
Bootstrap support for J3KLS5 as seed ortholog is 100%.
Bootstrap support for Q29DZ3 as seed ortholog is 100%.

Group of orthologs #1658. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 D.pseudoobscura:115

J3K9X9              	100.00%		B5DI33              	100.00%
                    	       		B5DIB2              	71.28%
                    	       		Q29HZ1              	62.37%
                    	       		B5DYK2              	48.14%
                    	       		B5DMC2              	46.81%
Bootstrap support for J3K9X9 as seed ortholog is 100%.
Bootstrap support for B5DI33 as seed ortholog is 100%.

Group of orthologs #1659. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 D.pseudoobscura:115

J3K332              	100.00%		Q297S7              	100.00%
                    	       		Q29B33              	69.08%
Bootstrap support for J3K332 as seed ortholog is 100%.
Bootstrap support for Q297S7 as seed ortholog is 100%.

Group of orthologs #1660. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 D.pseudoobscura:44

J3KGG6              	100.00%		Q290S3              	100.00%
                    	       		B5DZW9              	17.31%
Bootstrap support for J3KGG6 as seed ortholog is 100%.
Bootstrap support for Q290S3 as seed ortholog is 79%.

Group of orthologs #1661. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 D.pseudoobscura:115

J3KLZ6              	100.00%		Q290Q2              	100.00%
Bootstrap support for J3KLZ6 as seed ortholog is 100%.
Bootstrap support for Q290Q2 as seed ortholog is 100%.

Group of orthologs #1662. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 D.pseudoobscura:115

J3KB20              	100.00%		Q29MU0              	100.00%
Bootstrap support for J3KB20 as seed ortholog is 100%.
Bootstrap support for Q29MU0 as seed ortholog is 100%.

Group of orthologs #1663. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 D.pseudoobscura:115

J3KF17              	100.00%		Q2LZ67              	100.00%
Bootstrap support for J3KF17 as seed ortholog is 100%.
Bootstrap support for Q2LZ67 as seed ortholog is 100%.

Group of orthologs #1664. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:43 D.pseudoobscura:114

J0HH97              	100.00%		Q2LZV3              	100.00%
                    	       		B5DPL7              	77.25%
Bootstrap support for J0HH97 as seed ortholog is 90%.
Bootstrap support for Q2LZV3 as seed ortholog is 100%.

Group of orthologs #1665. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:18

I9NM81              	100.00%		Q29F91              	100.00%
Bootstrap support for I9NM81 as seed ortholog is 100%.
Bootstrap support for Q29F91 as seed ortholog is 77%.

Group of orthologs #1666. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:114

J3K5Y1              	100.00%		Q29DD9              	100.00%
Bootstrap support for J3K5Y1 as seed ortholog is 100%.
Bootstrap support for Q29DD9 as seed ortholog is 100%.

Group of orthologs #1667. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:34

J3KJU6              	100.00%		Q28YR1              	100.00%
Bootstrap support for J3KJU6 as seed ortholog is 100%.
Bootstrap support for Q28YR1 as seed ortholog is 73%.
Alternative seed ortholog is Q290I9 (34 bits away from this cluster)

Group of orthologs #1668. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:114

J3K8T2              	100.00%		Q29I50              	100.00%
Bootstrap support for J3K8T2 as seed ortholog is 100%.
Bootstrap support for Q29I50 as seed ortholog is 100%.

Group of orthologs #1669. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:114

J3KEL6              	100.00%		Q29K22              	100.00%
Bootstrap support for J3KEL6 as seed ortholog is 100%.
Bootstrap support for Q29K22 as seed ortholog is 100%.

Group of orthologs #1670. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 D.pseudoobscura:114

J3KG33              	100.00%		Q29P63              	100.00%
Bootstrap support for J3KG33 as seed ortholog is 100%.
Bootstrap support for Q29P63 as seed ortholog is 100%.

Group of orthologs #1671. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:47

J0HES0              	100.00%		Q29LF3              	100.00%
                    	       		B5DUY5              	88.74%
                    	       		Q29LK4              	20.68%
                    	       		B5DIZ9              	19.11%
                    	       		Q29LF2              	19.11%
Bootstrap support for J0HES0 as seed ortholog is 96%.
Bootstrap support for Q29LF3 as seed ortholog is 94%.

Group of orthologs #1672. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

I9NRA0              	100.00%		Q29DZ2              	100.00%
                    	       		Q2LYY0              	100.00%
                    	       		Q2LYY1              	10.88%
Bootstrap support for I9NRA0 as seed ortholog is 100%.
Bootstrap support for Q29DZ2 as seed ortholog is 100%.
Bootstrap support for Q2LYY0 as seed ortholog is 100%.

Group of orthologs #1673. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

J3KF93              	100.00%		Q292G6              	100.00%
                    	       		B5DHD2              	18.72%
                    	       		B5DTS5              	18.47%
Bootstrap support for J3KF93 as seed ortholog is 100%.
Bootstrap support for Q292G6 as seed ortholog is 100%.

Group of orthologs #1674. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

J3KM04              	100.00%		I7M5V3              	100.00%
J3K4S1              	11.37%		
Bootstrap support for J3KM04 as seed ortholog is 100%.
Bootstrap support for I7M5V3 as seed ortholog is 100%.

Group of orthologs #1675. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

J3KB85              	100.00%		Q29E09              	100.00%
                    	       		Q29KZ4              	100.00%
Bootstrap support for J3KB85 as seed ortholog is 100%.
Bootstrap support for Q29E09 as seed ortholog is 100%.
Bootstrap support for Q29KZ4 as seed ortholog is 100%.

Group of orthologs #1676. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:8

J0HI82              	100.00%		B5DP05              	100.00%
Bootstrap support for J0HI82 as seed ortholog is 100%.
Bootstrap support for B5DP05 as seed ortholog is 66%.
Alternative seed ortholog is Q29IR6 (8 bits away from this cluster)

Group of orthologs #1677. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

J3K8N8              	100.00%		Q293K8              	100.00%
Bootstrap support for J3K8N8 as seed ortholog is 100%.
Bootstrap support for Q293K8 as seed ortholog is 100%.

Group of orthologs #1678. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

J3KFW0              	100.00%		Q28YX2              	100.00%
Bootstrap support for J3KFW0 as seed ortholog is 100%.
Bootstrap support for Q28YX2 as seed ortholog is 100%.

Group of orthologs #1679. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:113

J3KBX5              	100.00%		Q29I19              	100.00%
Bootstrap support for J3KBX5 as seed ortholog is 100%.
Bootstrap support for Q29I19 as seed ortholog is 100%.

Group of orthologs #1680. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 D.pseudoobscura:28

J3KGE2              	100.00%		Q2M010              	100.00%
Bootstrap support for J3KGE2 as seed ortholog is 100%.
Bootstrap support for Q2M010 as seed ortholog is 80%.

Group of orthologs #1681. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J3K7T2              	100.00%		Q29F69              	100.00%
J3K4I8              	14.17%		B5DWP1              	35.52%
Bootstrap support for J3K7T2 as seed ortholog is 100%.
Bootstrap support for Q29F69 as seed ortholog is 100%.

Group of orthologs #1682. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J3K3J3              	100.00%		B5DPE8              	100.00%
Bootstrap support for J3K3J3 as seed ortholog is 100%.
Bootstrap support for B5DPE8 as seed ortholog is 100%.

Group of orthologs #1683. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J0HH84              	100.00%		Q297P7              	100.00%
Bootstrap support for J0HH84 as seed ortholog is 100%.
Bootstrap support for Q297P7 as seed ortholog is 100%.

Group of orthologs #1684. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J3K6M9              	100.00%		Q28ZY8              	100.00%
Bootstrap support for J3K6M9 as seed ortholog is 100%.
Bootstrap support for Q28ZY8 as seed ortholog is 100%.

Group of orthologs #1685. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J3K219              	100.00%		Q2LYP9              	100.00%
Bootstrap support for J3K219 as seed ortholog is 100%.
Bootstrap support for Q2LYP9 as seed ortholog is 100%.

Group of orthologs #1686. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J3K473              	100.00%		Q2LZX3              	100.00%
Bootstrap support for J3K473 as seed ortholog is 100%.
Bootstrap support for Q2LZX3 as seed ortholog is 100%.

Group of orthologs #1687. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:112

J3KM32              	100.00%		Q29BE4              	100.00%
Bootstrap support for J3KM32 as seed ortholog is 100%.
Bootstrap support for Q29BE4 as seed ortholog is 100%.

Group of orthologs #1688. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 D.pseudoobscura:64

Q1EAW8              	100.00%		Q29AI1              	100.00%
Bootstrap support for Q1EAW8 as seed ortholog is 100%.
Bootstrap support for Q29AI1 as seed ortholog is 94%.

Group of orthologs #1689. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 D.pseudoobscura:111

J3KCW9              	100.00%		Q28XW6              	100.00%
Bootstrap support for J3KCW9 as seed ortholog is 100%.
Bootstrap support for Q28XW6 as seed ortholog is 100%.

Group of orthologs #1690. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 D.pseudoobscura:32

J3KMC9              	100.00%		B5E1K7              	100.00%
Bootstrap support for J3KMC9 as seed ortholog is 100%.
Bootstrap support for B5E1K7 as seed ortholog is 84%.

Group of orthologs #1691. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:40 D.pseudoobscura:45

I9XN31              	100.00%		Q2M037              	100.00%
Bootstrap support for I9XN31 as seed ortholog is 89%.
Bootstrap support for Q2M037 as seed ortholog is 98%.

Group of orthologs #1692. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:110

J3K2S4              	100.00%		B5DVH7              	100.00%
                    	       		B5DUQ1              	93.26%
                    	       		B5DUP9              	87.64%
Bootstrap support for J3K2S4 as seed ortholog is 100%.
Bootstrap support for B5DVH7 as seed ortholog is 100%.

Group of orthologs #1693. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:110

J3KIQ1              	100.00%		Q29BX3              	100.00%
                    	       		Q29P41              	18.62%
Bootstrap support for J3KIQ1 as seed ortholog is 100%.
Bootstrap support for Q29BX3 as seed ortholog is 100%.

Group of orthologs #1694. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:110

I9NPY2              	100.00%		B5DWZ7              	100.00%
Bootstrap support for I9NPY2 as seed ortholog is 100%.
Bootstrap support for B5DWZ7 as seed ortholog is 100%.

Group of orthologs #1695. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:110

I9XJZ8              	100.00%		Q299N8              	100.00%
Bootstrap support for I9XJZ8 as seed ortholog is 100%.
Bootstrap support for Q299N8 as seed ortholog is 100%.

Group of orthologs #1696. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:57

J3KED4              	100.00%		Q28XJ5              	100.00%
Bootstrap support for J3KED4 as seed ortholog is 95%.
Bootstrap support for Q28XJ5 as seed ortholog is 98%.

Group of orthologs #1697. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:110

J3K467              	100.00%		Q29L14              	100.00%
Bootstrap support for J3K467 as seed ortholog is 100%.
Bootstrap support for Q29L14 as seed ortholog is 100%.

Group of orthologs #1698. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 D.pseudoobscura:110

J3KIL0              	100.00%		Q2LYW0              	100.00%
Bootstrap support for J3KIL0 as seed ortholog is 100%.
Bootstrap support for Q2LYW0 as seed ortholog is 100%.

Group of orthologs #1699. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:67

J3K5S1              	100.00%		O44091              	100.00%
                    	       		B5DW05              	31.03%
Bootstrap support for J3K5S1 as seed ortholog is 100%.
Bootstrap support for O44091 as seed ortholog is 99%.

Group of orthologs #1700. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3KFZ3              	100.00%		B5DKQ4              	100.00%
Bootstrap support for J3KFZ3 as seed ortholog is 100%.
Bootstrap support for B5DKQ4 as seed ortholog is 100%.

Group of orthologs #1701. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3K917              	100.00%		B5DXG8              	100.00%
Bootstrap support for J3K917 as seed ortholog is 100%.
Bootstrap support for B5DXG8 as seed ortholog is 100%.

Group of orthologs #1702. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3K5F3              	100.00%		I5APQ3              	100.00%
Bootstrap support for J3K5F3 as seed ortholog is 100%.
Bootstrap support for I5APQ3 as seed ortholog is 100%.

Group of orthologs #1703. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3KIF4              	100.00%		B5DRG2              	100.00%
Bootstrap support for J3KIF4 as seed ortholog is 100%.
Bootstrap support for B5DRG2 as seed ortholog is 100%.

Group of orthologs #1704. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3K971              	100.00%		Q28XN6              	100.00%
Bootstrap support for J3K971 as seed ortholog is 100%.
Bootstrap support for Q28XN6 as seed ortholog is 100%.

Group of orthologs #1705. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3K7R4              	100.00%		Q292N9              	100.00%
Bootstrap support for J3K7R4 as seed ortholog is 100%.
Bootstrap support for Q292N9 as seed ortholog is 100%.

Group of orthologs #1706. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:39

J3KCD2              	100.00%		Q290W1              	100.00%
Bootstrap support for J3KCD2 as seed ortholog is 100%.
Bootstrap support for Q290W1 as seed ortholog is 94%.

Group of orthologs #1707. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3KIY0              	100.00%		Q291S4              	100.00%
Bootstrap support for J3KIY0 as seed ortholog is 100%.
Bootstrap support for Q291S4 as seed ortholog is 100%.

Group of orthologs #1708. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3KKE3              	100.00%		Q296S2              	100.00%
Bootstrap support for J3KKE3 as seed ortholog is 100%.
Bootstrap support for Q296S2 as seed ortholog is 100%.

Group of orthologs #1709. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:49

J3K663              	100.00%		Q29P65              	100.00%
Bootstrap support for J3K663 as seed ortholog is 100%.
Bootstrap support for Q29P65 as seed ortholog is 99%.

Group of orthologs #1710. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

Q1E2I3              	100.00%		Q29JE8              	100.00%
Bootstrap support for Q1E2I3 as seed ortholog is 100%.
Bootstrap support for Q29JE8 as seed ortholog is 100%.

Group of orthologs #1711. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 D.pseudoobscura:109

J3KJ25              	100.00%		Q29P67              	100.00%
Bootstrap support for J3KJ25 as seed ortholog is 100%.
Bootstrap support for Q29P67 as seed ortholog is 100%.

Group of orthologs #1712. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:49 D.pseudoobscura:108

J3KAQ4              	100.00%		Q28YE2              	100.00%
                    	       		Q298Q1              	19.61%
                    	       		Q298Q0              	19.50%
                    	       		Q294V9              	14.52%
                    	       		Q28XU8              	11.48%
                    	       		Q290L8              	11.38%
                    	       		Q2M044              	11.05%
                    	       		Q29LW6              	10.08%
                    	       		Q29E59              	9.97%
                    	       		Q298P8              	9.75%
                    	       		Q29DN3              	7.91%
                    	       		Q29E63              	7.15%
                    	       		Q293M5              	6.83%
                    	       		Q2LZD0              	6.50%
                    	       		B5DW31              	6.18%
                    	       		Q29DN4              	5.85%
Bootstrap support for J3KAQ4 as seed ortholog is 90%.
Bootstrap support for Q28YE2 as seed ortholog is 100%.

Group of orthologs #1713. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:108

J3K399              	100.00%		B5DLJ4              	100.00%
                    	       		Q29J42              	84.71%
                    	       		B5DXX7              	48.82%
Bootstrap support for J3K399 as seed ortholog is 100%.
Bootstrap support for B5DLJ4 as seed ortholog is 100%.

Group of orthologs #1714. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:19

J0HHC5              	100.00%		Q299L5              	100.00%
Bootstrap support for J0HHC5 as seed ortholog is 100%.
Bootstrap support for Q299L5 as seed ortholog is 76%.

Group of orthologs #1715. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:57

J3K385              	100.00%		Q29A89              	100.00%
Bootstrap support for J3K385 as seed ortholog is 100%.
Bootstrap support for Q29A89 as seed ortholog is 99%.

Group of orthologs #1716. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:108

J3KJP4              	100.00%		Q290J8              	100.00%
Bootstrap support for J3KJP4 as seed ortholog is 100%.
Bootstrap support for Q290J8 as seed ortholog is 100%.

Group of orthologs #1717. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:108

J3KFZ0              	100.00%		Q297K6              	100.00%
Bootstrap support for J3KFZ0 as seed ortholog is 100%.
Bootstrap support for Q297K6 as seed ortholog is 100%.

Group of orthologs #1718. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:108

Q1DJR2              	100.00%		Q29IG5              	100.00%
Bootstrap support for Q1DJR2 as seed ortholog is 100%.
Bootstrap support for Q29IG5 as seed ortholog is 100%.

Group of orthologs #1719. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 D.pseudoobscura:108

Q1E9X9              	100.00%		Q2LZQ2              	100.00%
Bootstrap support for Q1E9X9 as seed ortholog is 100%.
Bootstrap support for Q2LZQ2 as seed ortholog is 100%.

Group of orthologs #1720. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:16 D.pseudoobscura:8

I9XJB7              	100.00%		Q29BT9              	100.00%
Bootstrap support for I9XJB7 as seed ortholog is 71%.
Alternative seed ortholog is J3K9A7 (16 bits away from this cluster)
Bootstrap support for Q29BT9 as seed ortholog is 60%.
Alternative seed ortholog is Q29PP0 (8 bits away from this cluster)

Group of orthologs #1721. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:107

J3K2H4              	100.00%		Q29AH6              	100.00%
Bootstrap support for J3K2H4 as seed ortholog is 100%.
Bootstrap support for Q29AH6 as seed ortholog is 100%.

Group of orthologs #1722. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:107

J3KBC6              	100.00%		Q29AN6              	100.00%
Bootstrap support for J3KBC6 as seed ortholog is 100%.
Bootstrap support for Q29AN6 as seed ortholog is 100%.

Group of orthologs #1723. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:107

J3KF64              	100.00%		Q29F35              	100.00%
Bootstrap support for J3KF64 as seed ortholog is 100%.
Bootstrap support for Q29F35 as seed ortholog is 100%.

Group of orthologs #1724. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:5

J3KEX8              	100.00%		Q29IK5              	100.00%
Bootstrap support for J3KEX8 as seed ortholog is 100%.
Bootstrap support for Q29IK5 as seed ortholog is 53%.
Alternative seed ortholog is B5DP39 (5 bits away from this cluster)

Group of orthologs #1725. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:107

Q1DTR6              	100.00%		Q29B17              	100.00%
Bootstrap support for Q1DTR6 as seed ortholog is 100%.
Bootstrap support for Q29B17 as seed ortholog is 100%.

Group of orthologs #1726. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 D.pseudoobscura:107

J3KLX9              	100.00%		Q29N92              	100.00%
Bootstrap support for J3KLX9 as seed ortholog is 100%.
Bootstrap support for Q29N92 as seed ortholog is 100%.

Group of orthologs #1727. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:8

J3K8U5              	100.00%		B5DYD8              	100.00%
                    	       		Q29BK2              	26.01%
                    	       		Q29BK5              	24.66%
                    	       		Q295H0              	24.66%
                    	       		Q297P4              	24.49%
                    	       		Q295G9              	23.82%
                    	       		Q29BK4              	15.54%
                    	       		B5DPB4              	10.30%
                    	       		Q299J0              	9.12%
                    	       		Q291X5              	7.77%
                    	       		Q291X4              	6.93%
                    	       		Q299J1              	5.91%
Bootstrap support for J3K8U5 as seed ortholog is 100%.
Bootstrap support for B5DYD8 as seed ortholog is 59%.
Alternative seed ortholog is Q29D49 (8 bits away from this cluster)

Group of orthologs #1728. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:106

J3K6B9              	100.00%		Q29H07              	100.00%
                    	       		Q294X1              	34.93%
                    	       		B5DVY2              	34.61%
Bootstrap support for J3K6B9 as seed ortholog is 100%.
Bootstrap support for Q29H07 as seed ortholog is 100%.

Group of orthologs #1729. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:38 D.pseudoobscura:59

J0HI30              	100.00%		Q297P9              	100.00%
                    	       		Q295V2              	12.71%
Bootstrap support for J0HI30 as seed ortholog is 98%.
Bootstrap support for Q297P9 as seed ortholog is 99%.

Group of orthologs #1730. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:106

J3K0I6              	100.00%		Q29ET2              	100.00%
                    	       		Q290U8              	17.34%
Bootstrap support for J3K0I6 as seed ortholog is 100%.
Bootstrap support for Q29ET2 as seed ortholog is 100%.

Group of orthologs #1731. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:6

J3K267              	100.00%		Q296T5              	100.00%
Bootstrap support for J3K267 as seed ortholog is 100%.
Bootstrap support for Q296T5 as seed ortholog is 61%.
Alternative seed ortholog is B5E128 (6 bits away from this cluster)

Group of orthologs #1732. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:106

J3K2M3              	100.00%		Q29CE7              	100.00%
Bootstrap support for J3K2M3 as seed ortholog is 100%.
Bootstrap support for Q29CE7 as seed ortholog is 100%.

Group of orthologs #1733. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:106

J3K7U7              	100.00%		Q29BK6              	100.00%
Bootstrap support for J3K7U7 as seed ortholog is 100%.
Bootstrap support for Q29BK6 as seed ortholog is 100%.

Group of orthologs #1734. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:106

J3KK91              	100.00%		Q290P9              	100.00%
Bootstrap support for J3KK91 as seed ortholog is 100%.
Bootstrap support for Q290P9 as seed ortholog is 100%.

Group of orthologs #1735. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:106

J3KHQ6              	100.00%		Q29J58              	100.00%
Bootstrap support for J3KHQ6 as seed ortholog is 100%.
Bootstrap support for Q29J58 as seed ortholog is 100%.

Group of orthologs #1736. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 D.pseudoobscura:25

J3KLP4              	100.00%		Q29IG7              	100.00%
Bootstrap support for J3KLP4 as seed ortholog is 100%.
Bootstrap support for Q29IG7 as seed ortholog is 82%.

Group of orthologs #1737. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3K6W4              	100.00%		Q299Z3              	100.00%
                    	       		Q299Z4              	12.14%
Bootstrap support for J3K6W4 as seed ortholog is 100%.
Bootstrap support for Q299Z3 as seed ortholog is 100%.

Group of orthologs #1738. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3K881              	100.00%		Q29EI9              	100.00%
                    	       		Q29EJ0              	59.28%
Bootstrap support for J3K881 as seed ortholog is 100%.
Bootstrap support for Q29EI9 as seed ortholog is 100%.

Group of orthologs #1739. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3K1B2              	100.00%		Q29DL0              	100.00%
Bootstrap support for J3K1B2 as seed ortholog is 100%.
Bootstrap support for Q29DL0 as seed ortholog is 100%.

Group of orthologs #1740. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3KJ07              	100.00%		I5APU9              	100.00%
Bootstrap support for J3KJ07 as seed ortholog is 100%.
Bootstrap support for I5APU9 as seed ortholog is 100%.

Group of orthologs #1741. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:8

J3K653              	100.00%		Q29DQ4              	100.00%
Bootstrap support for J3K653 as seed ortholog is 100%.
Bootstrap support for Q29DQ4 as seed ortholog is 60%.
Alternative seed ortholog is Q293E6 (8 bits away from this cluster)

Group of orthologs #1742. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3K3I2              	100.00%		Q29L80              	100.00%
Bootstrap support for J3K3I2 as seed ortholog is 100%.
Bootstrap support for Q29L80 as seed ortholog is 100%.

Group of orthologs #1743. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3KMB0              	100.00%		Q28ZB3              	100.00%
Bootstrap support for J3KMB0 as seed ortholog is 100%.
Bootstrap support for Q28ZB3 as seed ortholog is 100%.

Group of orthologs #1744. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 D.pseudoobscura:105

J3KF73              	100.00%		Q29FT9              	100.00%
Bootstrap support for J3KF73 as seed ortholog is 100%.
Bootstrap support for Q29FT9 as seed ortholog is 100%.

Group of orthologs #1745. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3K313              	100.00%		Q2M1C9              	100.00%
                    	       		B5DQM3              	6.39%
Bootstrap support for J3K313 as seed ortholog is 100%.
Bootstrap support for Q2M1C9 as seed ortholog is 100%.

Group of orthologs #1746. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3K861              	100.00%		B5DZ74              	100.00%
Bootstrap support for J3K861 as seed ortholog is 100%.
Bootstrap support for B5DZ74 as seed ortholog is 100%.

Group of orthologs #1747. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3KBK1              	100.00%		Q28ZH4              	100.00%
Bootstrap support for J3KBK1 as seed ortholog is 100%.
Bootstrap support for Q28ZH4 as seed ortholog is 100%.

Group of orthologs #1748. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3K1D8              	100.00%		Q29LJ2              	100.00%
Bootstrap support for J3K1D8 as seed ortholog is 100%.
Bootstrap support for Q29LJ2 as seed ortholog is 100%.

Group of orthologs #1749. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3K471              	100.00%		Q2LZD3              	100.00%
Bootstrap support for J3K471 as seed ortholog is 100%.
Bootstrap support for Q2LZD3 as seed ortholog is 100%.

Group of orthologs #1750. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3KMA6              	100.00%		Q29CY6              	100.00%
Bootstrap support for J3KMA6 as seed ortholog is 100%.
Bootstrap support for Q29CY6 as seed ortholog is 100%.

Group of orthologs #1751. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3KIT6              	100.00%		Q29I93              	100.00%
Bootstrap support for J3KIT6 as seed ortholog is 100%.
Bootstrap support for Q29I93 as seed ortholog is 100%.

Group of orthologs #1752. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 D.pseudoobscura:104

J3KKU6              	100.00%		Q2M1B7              	100.00%
Bootstrap support for J3KKU6 as seed ortholog is 100%.
Bootstrap support for Q2M1B7 as seed ortholog is 100%.

Group of orthologs #1753. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:16 D.pseudoobscura:31

J3KIW7              	100.00%		Q296L7              	100.00%
J3K733              	8.84%		
J3KA10              	8.06%		
Bootstrap support for J3KIW7 as seed ortholog is 71%.
Alternative seed ortholog is J3K9A7 (16 bits away from this cluster)
Bootstrap support for Q296L7 as seed ortholog is 82%.

Group of orthologs #1754. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:11 D.pseudoobscura:103

J3KA88              	100.00%		B5DYD9              	100.00%
                    	       		Q29BK1              	46.52%
Bootstrap support for J3KA88 as seed ortholog is 60%.
Alternative seed ortholog is I9NSW0 (11 bits away from this cluster)
Bootstrap support for B5DYD9 as seed ortholog is 100%.

Group of orthologs #1755. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:103

J3KLQ3              	100.00%		Q29N34              	100.00%
                    	       		Q2LYX4              	5.25%
Bootstrap support for J3KLQ3 as seed ortholog is 100%.
Bootstrap support for Q29N34 as seed ortholog is 100%.

Group of orthologs #1756. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:103

J3K7B1              	100.00%		B5DX88              	100.00%
Bootstrap support for J3K7B1 as seed ortholog is 100%.
Bootstrap support for B5DX88 as seed ortholog is 100%.

Group of orthologs #1757. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:103

J3K3R5              	100.00%		Q292A6              	100.00%
Bootstrap support for J3K3R5 as seed ortholog is 100%.
Bootstrap support for Q292A6 as seed ortholog is 100%.

Group of orthologs #1758. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:103

J3KCI4              	100.00%		Q29E79              	100.00%
Bootstrap support for J3KCI4 as seed ortholog is 100%.
Bootstrap support for Q29E79 as seed ortholog is 100%.

Group of orthologs #1759. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:103

J3KDK1              	100.00%		Q29E58              	100.00%
Bootstrap support for J3KDK1 as seed ortholog is 100%.
Bootstrap support for Q29E58 as seed ortholog is 100%.

Group of orthologs #1760. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:103

Q1DQB2              	100.00%		Q292F0              	100.00%
Bootstrap support for Q1DQB2 as seed ortholog is 100%.
Bootstrap support for Q292F0 as seed ortholog is 100%.

Group of orthologs #1761. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 D.pseudoobscura:11

J3K5B0              	100.00%		Q29NM5              	100.00%
Bootstrap support for J3K5B0 as seed ortholog is 100%.
Bootstrap support for Q29NM5 as seed ortholog is 69%.
Alternative seed ortholog is Q29M04 (11 bits away from this cluster)

Group of orthologs #1762. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 D.pseudoobscura:102

J3K5P1              	100.00%		Q291E5              	100.00%
Bootstrap support for J3K5P1 as seed ortholog is 100%.
Bootstrap support for Q291E5 as seed ortholog is 100%.

Group of orthologs #1763. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 D.pseudoobscura:102

J3K6S4              	100.00%		Q29BZ5              	100.00%
Bootstrap support for J3K6S4 as seed ortholog is 100%.
Bootstrap support for Q29BZ5 as seed ortholog is 100%.

Group of orthologs #1764. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 D.pseudoobscura:102

J3KGL1              	100.00%		Q292C3              	100.00%
Bootstrap support for J3KGL1 as seed ortholog is 100%.
Bootstrap support for Q292C3 as seed ortholog is 100%.

Group of orthologs #1765. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:102

J3KFE7              	100.00%		Q293X6              	100.00%
Bootstrap support for J3KFE7 as seed ortholog is 99%.
Bootstrap support for Q293X6 as seed ortholog is 100%.

Group of orthologs #1766. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 D.pseudoobscura:102

J3KHT0              	100.00%		Q29GS2              	100.00%
Bootstrap support for J3KHT0 as seed ortholog is 100%.
Bootstrap support for Q29GS2 as seed ortholog is 100%.

Group of orthologs #1767. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 D.pseudoobscura:102

J3KK25              	100.00%		Q29PD9              	100.00%
Bootstrap support for J3KK25 as seed ortholog is 100%.
Bootstrap support for Q29PD9 as seed ortholog is 100%.

Group of orthologs #1768. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3KFZ8              	100.00%		B5DPB0              	100.00%
Bootstrap support for J3KFZ8 as seed ortholog is 100%.
Bootstrap support for B5DPB0 as seed ortholog is 100%.

Group of orthologs #1769. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3KAI5              	100.00%		Q293Y0              	100.00%
Bootstrap support for J3KAI5 as seed ortholog is 100%.
Bootstrap support for Q293Y0 as seed ortholog is 100%.

Group of orthologs #1770. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3KCI2              	100.00%		Q292S4              	100.00%
Bootstrap support for J3KCI2 as seed ortholog is 100%.
Bootstrap support for Q292S4 as seed ortholog is 100%.

Group of orthologs #1771. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3KH52              	100.00%		Q295G7              	100.00%
Bootstrap support for J3KH52 as seed ortholog is 100%.
Bootstrap support for Q295G7 as seed ortholog is 100%.

Group of orthologs #1772. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3KL36              	100.00%		Q290L3              	100.00%
Bootstrap support for J3KL36 as seed ortholog is 100%.
Bootstrap support for Q290L3 as seed ortholog is 100%.

Group of orthologs #1773. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3K9T1              	100.00%		Q29FL8              	100.00%
Bootstrap support for J3K9T1 as seed ortholog is 100%.
Bootstrap support for Q29FL8 as seed ortholog is 100%.

Group of orthologs #1774. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:23

J3KJI9              	100.00%		Q294B2              	100.00%
Bootstrap support for J3KJI9 as seed ortholog is 100%.
Bootstrap support for Q294B2 as seed ortholog is 87%.

Group of orthologs #1775. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

J3KH51              	100.00%		Q29KX0              	100.00%
Bootstrap support for J3KH51 as seed ortholog is 100%.
Bootstrap support for Q29KX0 as seed ortholog is 100%.

Group of orthologs #1776. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 D.pseudoobscura:101

Q1E556              	100.00%		Q29FL1              	100.00%
Bootstrap support for Q1E556 as seed ortholog is 100%.
Bootstrap support for Q29FL1 as seed ortholog is 100%.

Group of orthologs #1777. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KLY3              	100.00%		Q28XR3              	100.00%
J3KCQ7              	43.43%		
J3KAB0              	7.57%		
J3KLU6              	6.12%		
Bootstrap support for J3KLY3 as seed ortholog is 100%.
Bootstrap support for Q28XR3 as seed ortholog is 100%.

Group of orthologs #1778. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3K4K5              	100.00%		Q29EH2              	100.00%
                    	       		B5DYQ5              	37.68%
                    	       		B5DYQ7              	37.20%
Bootstrap support for J3K4K5 as seed ortholog is 100%.
Bootstrap support for Q29EH2 as seed ortholog is 100%.

Group of orthologs #1779. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3K4J6              	100.00%		Q29EH4              	100.00%
                    	       		B5DVU8              	8.42%
Bootstrap support for J3K4J6 as seed ortholog is 100%.
Bootstrap support for Q29EH4 as seed ortholog is 100%.

Group of orthologs #1780. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:9

J0HFC7              	100.00%		Q2LZM9              	100.00%
J3KA55              	28.80%		
Bootstrap support for J0HFC7 as seed ortholog is 81%.
Bootstrap support for Q2LZM9 as seed ortholog is 56%.
Alternative seed ortholog is Q2LZW4 (9 bits away from this cluster)

Group of orthologs #1781. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3K5P0              	100.00%		I5AMN4              	100.00%
Bootstrap support for J3K5P0 as seed ortholog is 100%.
Bootstrap support for I5AMN4 as seed ortholog is 100%.

Group of orthologs #1782. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3K6D3              	100.00%		Q290Z0              	100.00%
Bootstrap support for J3K6D3 as seed ortholog is 100%.
Bootstrap support for Q290Z0 as seed ortholog is 100%.

Group of orthologs #1783. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KLE9              	100.00%		B5DXR6              	100.00%
Bootstrap support for J3KLE9 as seed ortholog is 100%.
Bootstrap support for B5DXR6 as seed ortholog is 100%.

Group of orthologs #1784. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:28

J3KEE2              	100.00%		Q29BQ6              	100.00%
Bootstrap support for J3KEE2 as seed ortholog is 100%.
Bootstrap support for Q29BQ6 as seed ortholog is 66%.
Alternative seed ortholog is Q2LYN3 (28 bits away from this cluster)

Group of orthologs #1785. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:5

J3KD00              	100.00%		Q29EF5              	100.00%
Bootstrap support for J3KD00 as seed ortholog is 100%.
Bootstrap support for Q29EF5 as seed ortholog is 70%.
Alternative seed ortholog is Q29HG8 (5 bits away from this cluster)

Group of orthologs #1786. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

Q1DU75              	100.00%		Q293T0              	100.00%
Bootstrap support for Q1DU75 as seed ortholog is 100%.
Bootstrap support for Q293T0 as seed ortholog is 100%.

Group of orthologs #1787. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KBI1              	100.00%		Q29LS7              	100.00%
Bootstrap support for J3KBI1 as seed ortholog is 100%.
Bootstrap support for Q29LS7 as seed ortholog is 100%.

Group of orthologs #1788. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KE21              	100.00%		Q29KF5              	100.00%
Bootstrap support for J3KE21 as seed ortholog is 100%.
Bootstrap support for Q29KF5 as seed ortholog is 100%.

Group of orthologs #1789. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KDQ7              	100.00%		Q2M0P4              	100.00%
Bootstrap support for J3KDQ7 as seed ortholog is 100%.
Bootstrap support for Q2M0P4 as seed ortholog is 100%.

Group of orthologs #1790. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KHK8              	100.00%		Q29NU8              	100.00%
Bootstrap support for J3KHK8 as seed ortholog is 100%.
Bootstrap support for Q29NU8 as seed ortholog is 100%.

Group of orthologs #1791. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KE68              	100.00%		Q2M1C1              	100.00%
Bootstrap support for J3KE68 as seed ortholog is 100%.
Bootstrap support for Q2M1C1 as seed ortholog is 100%.

Group of orthologs #1792. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 D.pseudoobscura:100

J3KLF0              	100.00%		Q29N75              	100.00%
Bootstrap support for J3KLF0 as seed ortholog is 100%.
Bootstrap support for Q29N75 as seed ortholog is 100%.

Group of orthologs #1793. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 D.pseudoobscura:99

J3KFH8              	100.00%		B5DN29              	100.00%
Bootstrap support for J3KFH8 as seed ortholog is 100%.
Bootstrap support for B5DN29 as seed ortholog is 100%.

Group of orthologs #1794. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:23 D.pseudoobscura:34

J3K1B6              	100.00%		Q28Z93              	100.00%
Bootstrap support for J3K1B6 as seed ortholog is 86%.
Bootstrap support for Q28Z93 as seed ortholog is 92%.

Group of orthologs #1795. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:33 D.pseudoobscura:19

J3KIY9              	100.00%		Q28YJ0              	100.00%
Bootstrap support for J3KIY9 as seed ortholog is 95%.
Bootstrap support for Q28YJ0 as seed ortholog is 84%.

Group of orthologs #1796. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 D.pseudoobscura:99

J3K289              	100.00%		Q2M095              	100.00%
Bootstrap support for J3K289 as seed ortholog is 100%.
Bootstrap support for Q2M095 as seed ortholog is 100%.

Group of orthologs #1797. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 D.pseudoobscura:99

J3KG84              	100.00%		Q29MW0              	100.00%
Bootstrap support for J3KG84 as seed ortholog is 100%.
Bootstrap support for Q29MW0 as seed ortholog is 100%.

Group of orthologs #1798. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 D.pseudoobscura:99

J3KKX2              	100.00%		Q29JM4              	100.00%
Bootstrap support for J3KKX2 as seed ortholog is 100%.
Bootstrap support for Q29JM4 as seed ortholog is 100%.

Group of orthologs #1799. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 D.pseudoobscura:98

I9XJ67              	100.00%		Q290U2              	100.00%
                    	       		B5DL99              	36.51%
Bootstrap support for I9XJ67 as seed ortholog is 100%.
Bootstrap support for Q290U2 as seed ortholog is 100%.

Group of orthologs #1800. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:25 D.pseudoobscura:98

J3K2B3              	100.00%		Q28XJ4              	100.00%
J3K792              	6.26%		
Bootstrap support for J3K2B3 as seed ortholog is 66%.
Alternative seed ortholog is I9NMQ7 (25 bits away from this cluster)
Bootstrap support for Q28XJ4 as seed ortholog is 100%.

Group of orthologs #1801. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 D.pseudoobscura:98

J0HGF3              	100.00%		Q291F9              	100.00%
                    	       		B5DQP9              	19.95%
Bootstrap support for J0HGF3 as seed ortholog is 100%.
Bootstrap support for Q291F9 as seed ortholog is 100%.

Group of orthologs #1802. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 D.pseudoobscura:98

J3K4L5              	100.00%		B5DY58              	100.00%
Bootstrap support for J3K4L5 as seed ortholog is 100%.
Bootstrap support for B5DY58 as seed ortholog is 100%.

Group of orthologs #1803. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 D.pseudoobscura:39

J3K7M5              	100.00%		Q28XH9              	100.00%
Bootstrap support for J3K7M5 as seed ortholog is 100%.
Bootstrap support for Q28XH9 as seed ortholog is 94%.

Group of orthologs #1804. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 D.pseudoobscura:98

J0HHP4              	100.00%		Q29MS8              	100.00%
Bootstrap support for J0HHP4 as seed ortholog is 100%.
Bootstrap support for Q29MS8 as seed ortholog is 100%.

Group of orthologs #1805. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 D.pseudoobscura:98

J3K658              	100.00%		Q2LYX7              	100.00%
Bootstrap support for J3K658 as seed ortholog is 100%.
Bootstrap support for Q2LYX7 as seed ortholog is 100%.

Group of orthologs #1806. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:97

J3K441              	100.00%		B5DUT4              	100.00%
                    	       		B5DUT3              	84.42%
                    	       		B5DUT2              	83.46%
                    	       		Q29KK3              	81.02%
                    	       		B5DLZ1              	57.16%
                    	       		B5DJS0              	54.21%
Bootstrap support for J3K441 as seed ortholog is 100%.
Bootstrap support for B5DUT4 as seed ortholog is 100%.

Group of orthologs #1807. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:6

J3K197              	100.00%		Q29P76              	100.00%
J3KME9              	20.30%		Q29JY9              	7.57%
                    	       		Q29PP4              	6.78%
                    	       		Q2M0N9              	5.65%
Bootstrap support for J3K197 as seed ortholog is 100%.
Bootstrap support for Q29P76 as seed ortholog is 52%.
Alternative seed ortholog is Q29KV0 (6 bits away from this cluster)

Group of orthologs #1808. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:97

J3KGN3              	100.00%		B5DYM1              	100.00%
                    	       		Q299B6              	100.00%
Bootstrap support for J3KGN3 as seed ortholog is 100%.
Bootstrap support for B5DYM1 as seed ortholog is 100%.
Bootstrap support for Q299B6 as seed ortholog is 100%.

Group of orthologs #1809. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:52

J3KD17              	100.00%		B5DPR5              	100.00%
Bootstrap support for J3KD17 as seed ortholog is 100%.
Bootstrap support for B5DPR5 as seed ortholog is 86%.

Group of orthologs #1810. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:97

I9NPB0              	100.00%		Q293G4              	100.00%
Bootstrap support for I9NPB0 as seed ortholog is 100%.
Bootstrap support for Q293G4 as seed ortholog is 100%.

Group of orthologs #1811. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:97

I9NKY4              	100.00%		Q29KG9              	100.00%
Bootstrap support for I9NKY4 as seed ortholog is 100%.
Bootstrap support for Q29KG9 as seed ortholog is 100%.

Group of orthologs #1812. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 D.pseudoobscura:97

I9XMV0              	100.00%		Q29IM5              	100.00%
Bootstrap support for I9XMV0 as seed ortholog is 100%.
Bootstrap support for Q29IM5 as seed ortholog is 100%.

Group of orthologs #1813. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:13

J3KKM8              	100.00%		B5DI02              	100.00%
                    	       		Q28XH7              	8.30%
                    	       		I5APQ5              	6.42%
                    	       		Q299B3              	5.59%
                    	       		Q298C8              	5.01%
Bootstrap support for J3KKM8 as seed ortholog is 100%.
Bootstrap support for B5DI02 as seed ortholog is 62%.
Alternative seed ortholog is Q293Q2 (13 bits away from this cluster)

Group of orthologs #1814. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

J3KBZ6              	100.00%		B5DLJ0              	100.00%
                    	       		Q295F7              	31.04%
                    	       		B5DYJ5              	9.75%
                    	       		Q29HC8              	9.34%
Bootstrap support for J3KBZ6 as seed ortholog is 100%.
Bootstrap support for B5DLJ0 as seed ortholog is 100%.

Group of orthologs #1815. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:32

J3K166              	100.00%		Q295F3              	100.00%
                    	       		Q29N49              	5.29%
Bootstrap support for J3K166 as seed ortholog is 100%.
Bootstrap support for Q295F3 as seed ortholog is 89%.

Group of orthologs #1816. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:20 D.pseudoobscura:96

J3K5A8              	100.00%		Q29H80              	100.00%
J3K864              	41.71%		
Bootstrap support for J3K5A8 as seed ortholog is 70%.
Alternative seed ortholog is I9NLR6 (20 bits away from this cluster)
Bootstrap support for Q29H80 as seed ortholog is 100%.

Group of orthologs #1817. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

J3KIG1              	100.00%		B5DJL0              	100.00%
Bootstrap support for J3KIG1 as seed ortholog is 100%.
Bootstrap support for B5DJL0 as seed ortholog is 100%.

Group of orthologs #1818. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

Q1E493              	100.00%		B5DQK2              	100.00%
Bootstrap support for Q1E493 as seed ortholog is 100%.
Bootstrap support for B5DQK2 as seed ortholog is 100%.

Group of orthologs #1819. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

J3K416              	100.00%		Q297I9              	100.00%
Bootstrap support for J3K416 as seed ortholog is 100%.
Bootstrap support for Q297I9 as seed ortholog is 100%.

Group of orthologs #1820. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

J3KJI1              	100.00%		Q28Y78              	100.00%
Bootstrap support for J3KJI1 as seed ortholog is 100%.
Bootstrap support for Q28Y78 as seed ortholog is 100%.

Group of orthologs #1821. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

J3KID7              	100.00%		Q294L0              	100.00%
Bootstrap support for J3KID7 as seed ortholog is 100%.
Bootstrap support for Q294L0 as seed ortholog is 100%.

Group of orthologs #1822. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 D.pseudoobscura:96

J3KKS1              	100.00%		Q2LZ61              	100.00%
Bootstrap support for J3KKS1 as seed ortholog is 100%.
Bootstrap support for Q2LZ61 as seed ortholog is 100%.

Group of orthologs #1823. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3K054              	100.00%		B5DYX0              	100.00%
                    	       		B5DYW9              	57.66%
                    	       		B5DI69              	20.27%
Bootstrap support for J3K054 as seed ortholog is 100%.
Bootstrap support for B5DYX0 as seed ortholog is 100%.

Group of orthologs #1824. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3K8L8              	100.00%		B5DV67              	100.00%
                    	       		Q29PC8              	99.48%
Bootstrap support for J3K8L8 as seed ortholog is 100%.
Bootstrap support for B5DV67 as seed ortholog is 100%.

Group of orthologs #1825. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:41 D.pseudoobscura:95

J3KDT1              	100.00%		Q295T6              	100.00%
                    	       		Q295T5              	55.74%
Bootstrap support for J3KDT1 as seed ortholog is 87%.
Bootstrap support for Q295T6 as seed ortholog is 100%.

Group of orthologs #1826. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3K4Q1              	100.00%		Q29KU0              	100.00%
J3KAV4              	7.63%		
Bootstrap support for J3K4Q1 as seed ortholog is 100%.
Bootstrap support for Q29KU0 as seed ortholog is 100%.

Group of orthologs #1827. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3K1L6              	100.00%		Q28WJ5              	100.00%
Bootstrap support for J3K1L6 as seed ortholog is 100%.
Bootstrap support for Q28WJ5 as seed ortholog is 100%.

Group of orthologs #1828. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3K4G5              	100.00%		Q296F1              	100.00%
Bootstrap support for J3K4G5 as seed ortholog is 100%.
Bootstrap support for Q296F1 as seed ortholog is 100%.

Group of orthologs #1829. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3K873              	100.00%		Q29C23              	100.00%
Bootstrap support for J3K873 as seed ortholog is 100%.
Bootstrap support for Q29C23 as seed ortholog is 100%.

Group of orthologs #1830. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 D.pseudoobscura:95

J3KLR6              	100.00%		Q28XK6              	100.00%
Bootstrap support for J3KLR6 as seed ortholog is 100%.
Bootstrap support for Q28XK6 as seed ortholog is 100%.

Group of orthologs #1831. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:36 D.pseudoobscura:94

J3KMF5              	100.00%		Q290P0              	100.00%
                    	       		Q299M8              	7.94%
Bootstrap support for J3KMF5 as seed ortholog is 80%.
Bootstrap support for Q290P0 as seed ortholog is 100%.

Group of orthologs #1832. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:94

J3KDL0              	100.00%		B5DW06              	100.00%
Bootstrap support for J3KDL0 as seed ortholog is 100%.
Bootstrap support for B5DW06 as seed ortholog is 100%.

Group of orthologs #1833. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:94

I9XIL0              	100.00%		Q29EF6              	100.00%
Bootstrap support for I9XIL0 as seed ortholog is 100%.
Bootstrap support for Q29EF6 as seed ortholog is 100%.

Group of orthologs #1834. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:94

J3K7D5              	100.00%		Q29BT7              	100.00%
Bootstrap support for J3K7D5 as seed ortholog is 100%.
Bootstrap support for Q29BT7 as seed ortholog is 100%.

Group of orthologs #1835. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:94

J3K5I8              	100.00%		Q2LYM7              	100.00%
Bootstrap support for J3K5I8 as seed ortholog is 100%.
Bootstrap support for Q2LYM7 as seed ortholog is 100%.

Group of orthologs #1836. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:26

J3KDI8              	100.00%		Q29PN2              	100.00%
Bootstrap support for J3KDI8 as seed ortholog is 100%.
Bootstrap support for Q29PN2 as seed ortholog is 81%.

Group of orthologs #1837. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 D.pseudoobscura:94

J3KGM4              	100.00%		Q2M024              	100.00%
Bootstrap support for J3KGM4 as seed ortholog is 100%.
Bootstrap support for Q2M024 as seed ortholog is 100%.

Group of orthologs #1838. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3K2B5              	100.00%		Q29NA8              	100.00%
                    	       		Q29J34              	28.10%
                    	       		Q2M168              	11.57%
Bootstrap support for J3K2B5 as seed ortholog is 100%.
Bootstrap support for Q29NA8 as seed ortholog is 100%.

Group of orthologs #1839. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3KHP1              	100.00%		B5DWG8              	100.00%
                    	       		Q294M0              	8.40%
Bootstrap support for J3KHP1 as seed ortholog is 100%.
Bootstrap support for B5DWG8 as seed ortholog is 100%.

Group of orthologs #1840. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3K0B2              	100.00%		Q29GB6              	100.00%
                    	       		B5DT70              	87.59%
Bootstrap support for J3K0B2 as seed ortholog is 100%.
Bootstrap support for Q29GB6 as seed ortholog is 100%.

Group of orthologs #1841. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:32 D.pseudoobscura:93

J3K8Z8              	100.00%		B5DQU1              	100.00%
Bootstrap support for J3K8Z8 as seed ortholog is 46%.
Alternative seed ortholog is J3K8D8 (32 bits away from this cluster)
Bootstrap support for B5DQU1 as seed ortholog is 100%.

Group of orthologs #1842. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3K8I1              	100.00%		B5DSA5              	100.00%
Bootstrap support for J3K8I1 as seed ortholog is 100%.
Bootstrap support for B5DSA5 as seed ortholog is 100%.

Group of orthologs #1843. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3K487              	100.00%		Q29E60              	100.00%
Bootstrap support for J3K487 as seed ortholog is 100%.
Bootstrap support for Q29E60 as seed ortholog is 100%.

Group of orthologs #1844. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3KGJ1              	100.00%		Q299C4              	100.00%
Bootstrap support for J3KGJ1 as seed ortholog is 100%.
Bootstrap support for Q299C4 as seed ortholog is 100%.

Group of orthologs #1845. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3K4S0              	100.00%		Q29PM6              	100.00%
Bootstrap support for J3K4S0 as seed ortholog is 100%.
Bootstrap support for Q29PM6 as seed ortholog is 100%.

Group of orthologs #1846. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 D.pseudoobscura:93

J3KHY0              	100.00%		Q29EN0              	100.00%
Bootstrap support for J3KHY0 as seed ortholog is 100%.
Bootstrap support for Q29EN0 as seed ortholog is 100%.

Group of orthologs #1847. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 D.pseudoobscura:92

J3K8Z1              	100.00%		Q28X64              	100.00%
J3K169              	12.68%		
J3K0U4              	9.41%		
J0HEX5              	6.65%		
Bootstrap support for J3K8Z1 as seed ortholog is 100%.
Bootstrap support for Q28X64 as seed ortholog is 100%.

Group of orthologs #1848. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 D.pseudoobscura:92

J3KF05              	100.00%		Q29ES3              	100.00%
                    	       		Q29HQ7              	51.29%
                    	       		B5DH98              	35.10%
Bootstrap support for J3KF05 as seed ortholog is 100%.
Bootstrap support for Q29ES3 as seed ortholog is 100%.

Group of orthologs #1849. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 D.pseudoobscura:92

J3K919              	100.00%		Q29EE9              	100.00%
Bootstrap support for J3K919 as seed ortholog is 100%.
Bootstrap support for Q29EE9 as seed ortholog is 100%.

Group of orthologs #1850. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:30 D.pseudoobscura:29

J3KG94              	100.00%		B5DZR7              	100.00%
                    	       		Q28YS8              	100.00%
                    	       		Q28YS7              	42.45%
                    	       		Q28YS6              	40.17%
                    	       		Q28YS9              	31.91%
                    	       		Q28YS5              	31.34%
                    	       		Q28YT0              	26.91%
                    	       		Q28Z16              	26.91%
                    	       		Q28YT1              	26.21%
                    	       		Q28YR2              	21.37%
                    	       		Q29B41              	18.41%
                    	       		B5DVJ7              	17.56%
                    	       		B5DVJ8              	17.00%
                    	       		Q29B43              	16.71%
                    	       		Q29B39              	16.43%
                    	       		Q29B42              	16.43%
                    	       		Q29B44              	15.86%
                    	       		Q29B45              	14.16%
                    	       		Q28ZB5              	12.54%
Bootstrap support for J3KG94 as seed ortholog is 83%.
Bootstrap support for B5DZR7 as seed ortholog is 84%.
Bootstrap support for Q28YS8 as seed ortholog is 84%.

Group of orthologs #1851. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3K0L9              	100.00%		Q298W9              	100.00%
                    	       		Q2M0C3              	39.09%
Bootstrap support for J3K0L9 as seed ortholog is 100%.
Bootstrap support for Q298W9 as seed ortholog is 100%.

Group of orthologs #1852. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:20 D.pseudoobscura:91

J3K6A9              	100.00%		Q29FM3              	100.00%
                    	       		Q29G03              	35.45%
Bootstrap support for J3K6A9 as seed ortholog is 73%.
Alternative seed ortholog is J3KM46 (20 bits away from this cluster)
Bootstrap support for Q29FM3 as seed ortholog is 100%.

Group of orthologs #1853. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3KM50              	100.00%		Q29G95              	100.00%
                    	       		B5DZ63              	39.48%
Bootstrap support for J3KM50 as seed ortholog is 100%.
Bootstrap support for Q29G95 as seed ortholog is 100%.

Group of orthologs #1854. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:12

J3K5I4              	100.00%		B5DKL7              	100.00%
Bootstrap support for J3K5I4 as seed ortholog is 100%.
Bootstrap support for B5DKL7 as seed ortholog is 68%.
Alternative seed ortholog is Q2LZU1 (12 bits away from this cluster)

Group of orthologs #1855. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3K1L0              	100.00%		B5DW49              	100.00%
Bootstrap support for J3K1L0 as seed ortholog is 100%.
Bootstrap support for B5DW49 as seed ortholog is 100%.

Group of orthologs #1856. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3KE04              	100.00%		B5DXP7              	100.00%
Bootstrap support for J3KE04 as seed ortholog is 100%.
Bootstrap support for B5DXP7 as seed ortholog is 100%.

Group of orthologs #1857. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J0HE36              	100.00%		Q29DW6              	100.00%
Bootstrap support for J0HE36 as seed ortholog is 100%.
Bootstrap support for Q29DW6 as seed ortholog is 100%.

Group of orthologs #1858. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3K5J3              	100.00%		Q29BD9              	100.00%
Bootstrap support for J3K5J3 as seed ortholog is 100%.
Bootstrap support for Q29BD9 as seed ortholog is 100%.

Group of orthologs #1859. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3KJH5              	100.00%		Q28ZN5              	100.00%
Bootstrap support for J3KJH5 as seed ortholog is 100%.
Bootstrap support for Q28ZN5 as seed ortholog is 100%.

Group of orthologs #1860. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:27

J3K259              	100.00%		Q29L90              	100.00%
Bootstrap support for J3K259 as seed ortholog is 100%.
Bootstrap support for Q29L90 as seed ortholog is 77%.

Group of orthologs #1861. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3KBG5              	100.00%		Q29D58              	100.00%
Bootstrap support for J3KBG5 as seed ortholog is 100%.
Bootstrap support for Q29D58 as seed ortholog is 100%.

Group of orthologs #1862. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3KL96              	100.00%		Q294R0              	100.00%
Bootstrap support for J3KL96 as seed ortholog is 100%.
Bootstrap support for Q294R0 as seed ortholog is 100%.

Group of orthologs #1863. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

Q1E6D3              	100.00%		Q292B6              	100.00%
Bootstrap support for Q1E6D3 as seed ortholog is 100%.
Bootstrap support for Q292B6 as seed ortholog is 100%.

Group of orthologs #1864. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 D.pseudoobscura:91

J3KAH4              	100.00%		Q29PJ7              	100.00%
Bootstrap support for J3KAH4 as seed ortholog is 100%.
Bootstrap support for Q29PJ7 as seed ortholog is 100%.

Group of orthologs #1865. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:29 D.pseudoobscura:90

J3K911              	100.00%		Q291I9              	100.00%
                    	       		B5E021              	20.59%
                    	       		B5E1J2              	9.50%
                    	       		B5E1J3              	7.92%
                    	       		Q28ZF0              	5.43%
Bootstrap support for J3K911 as seed ortholog is 79%.
Bootstrap support for Q291I9 as seed ortholog is 100%.

Group of orthologs #1866. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3KM56              	100.00%		B5DM20              	100.00%
Bootstrap support for J3KM56 as seed ortholog is 100%.
Bootstrap support for B5DM20 as seed ortholog is 100%.

Group of orthologs #1867. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3K995              	100.00%		Q28XJ9              	100.00%
Bootstrap support for J3K995 as seed ortholog is 100%.
Bootstrap support for Q28XJ9 as seed ortholog is 100%.

Group of orthologs #1868. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3K3K3              	100.00%		Q29CI3              	100.00%
Bootstrap support for J3K3K3 as seed ortholog is 100%.
Bootstrap support for Q29CI3 as seed ortholog is 100%.

Group of orthologs #1869. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3KLZ9              	100.00%		Q29DA3              	100.00%
Bootstrap support for J3KLZ9 as seed ortholog is 100%.
Bootstrap support for Q29DA3 as seed ortholog is 100%.

Group of orthologs #1870. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3KEC6              	100.00%		Q29NZ4              	100.00%
Bootstrap support for J3KEC6 as seed ortholog is 100%.
Bootstrap support for Q29NZ4 as seed ortholog is 100%.

Group of orthologs #1871. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3KDJ6              	100.00%		Q2M153              	100.00%
Bootstrap support for J3KDJ6 as seed ortholog is 100%.
Bootstrap support for Q2M153 as seed ortholog is 100%.

Group of orthologs #1872. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 D.pseudoobscura:90

J3KL29              	100.00%		Q29NW0              	100.00%
Bootstrap support for J3KL29 as seed ortholog is 100%.
Bootstrap support for Q29NW0 as seed ortholog is 100%.

Group of orthologs #1873. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:21 D.pseudoobscura:89

J3K7B7              	100.00%		Q29JZ1              	100.00%
                    	       		B5DUZ4              	69.39%
                    	       		B5DK71              	50.57%
Bootstrap support for J3K7B7 as seed ortholog is 65%.
Alternative seed ortholog is I9NMQ7 (21 bits away from this cluster)
Bootstrap support for Q29JZ1 as seed ortholog is 100%.

Group of orthologs #1874. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3KLC8              	100.00%		B5DH81              	100.00%
                    	       		Q294K5              	40.54%
Bootstrap support for J3KLC8 as seed ortholog is 100%.
Bootstrap support for B5DH81 as seed ortholog is 100%.

Group of orthologs #1875. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3KES8              	100.00%		B5DVB2              	100.00%
                    	       		B5DVA9              	40.10%
Bootstrap support for J3KES8 as seed ortholog is 100%.
Bootstrap support for B5DVB2 as seed ortholog is 100%.

Group of orthologs #1876. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3KIA8              	100.00%		Q29E51              	100.00%
J3KGV9              	13.50%		
Bootstrap support for J3KIA8 as seed ortholog is 100%.
Bootstrap support for Q29E51 as seed ortholog is 100%.

Group of orthologs #1877. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

I9NPS1              	100.00%		Q298X4              	100.00%
Bootstrap support for I9NPS1 as seed ortholog is 100%.
Bootstrap support for Q298X4 as seed ortholog is 100%.

Group of orthologs #1878. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:32

J3KKA3              	100.00%		B5DRJ9              	100.00%
Bootstrap support for J3KKA3 as seed ortholog is 100%.
Bootstrap support for B5DRJ9 as seed ortholog is 76%.

Group of orthologs #1879. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:2 D.pseudoobscura:89

J3KK66              	100.00%		Q290N2              	100.00%
Bootstrap support for J3KK66 as seed ortholog is 50%.
Alternative seed ortholog is J3K6E5 (2 bits away from this cluster)
Bootstrap support for Q290N2 as seed ortholog is 100%.

Group of orthologs #1880. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

Q1DRN0              	100.00%		Q28XW8              	100.00%
Bootstrap support for Q1DRN0 as seed ortholog is 100%.
Bootstrap support for Q28XW8 as seed ortholog is 100%.

Group of orthologs #1881. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3K1T8              	100.00%		Q29PL9              	100.00%
Bootstrap support for J3K1T8 as seed ortholog is 100%.
Bootstrap support for Q29PL9 as seed ortholog is 100%.

Group of orthologs #1882. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3KH48              	100.00%		Q29CR8              	100.00%
Bootstrap support for J3KH48 as seed ortholog is 100%.
Bootstrap support for Q29CR8 as seed ortholog is 100%.

Group of orthologs #1883. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3KEC9              	100.00%		Q2LZX1              	100.00%
Bootstrap support for J3KEC9 as seed ortholog is 100%.
Bootstrap support for Q2LZX1 as seed ortholog is 100%.

Group of orthologs #1884. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 D.pseudoobscura:89

J3KHK9              	100.00%		Q2M0A5              	100.00%
Bootstrap support for J3KHK9 as seed ortholog is 100%.
Bootstrap support for Q2M0A5 as seed ortholog is 100%.

Group of orthologs #1885. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:88

J3K7B0              	100.00%		B5DLM3              	100.00%
Bootstrap support for J3K7B0 as seed ortholog is 100%.
Bootstrap support for B5DLM3 as seed ortholog is 100%.

Group of orthologs #1886. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:88

J0HHB3              	100.00%		Q29HY5              	100.00%
Bootstrap support for J0HHB3 as seed ortholog is 100%.
Bootstrap support for Q29HY5 as seed ortholog is 100%.

Group of orthologs #1887. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:44

J3K481              	100.00%		Q29ID4              	100.00%
Bootstrap support for J3K481 as seed ortholog is 100%.
Bootstrap support for Q29ID4 as seed ortholog is 99%.

Group of orthologs #1888. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:88

J3K2G7              	100.00%		Q29P86              	100.00%
Bootstrap support for J3K2G7 as seed ortholog is 100%.
Bootstrap support for Q29P86 as seed ortholog is 100%.

Group of orthologs #1889. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:88

J3KB38              	100.00%		Q2LZL9              	100.00%
Bootstrap support for J3KB38 as seed ortholog is 100%.
Bootstrap support for Q2LZL9 as seed ortholog is 100%.

Group of orthologs #1890. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:88

J3KEU2              	100.00%		Q2LZP7              	100.00%
Bootstrap support for J3KEU2 as seed ortholog is 100%.
Bootstrap support for Q2LZP7 as seed ortholog is 100%.

Group of orthologs #1891. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:88

J3KHC9              	100.00%		Q29NS6              	100.00%
Bootstrap support for J3KHC9 as seed ortholog is 90%.
Bootstrap support for Q29NS6 as seed ortholog is 100%.

Group of orthologs #1892. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 D.pseudoobscura:88

J3KJM4              	100.00%		Q2LZE9              	100.00%
Bootstrap support for J3KJM4 as seed ortholog is 100%.
Bootstrap support for Q2LZE9 as seed ortholog is 100%.

Group of orthologs #1893. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:42 D.pseudoobscura:87

J3KLG3              	100.00%		Q29ML9              	100.00%
                    	       		Q29MM0              	25.43%
                    	       		Q29MM1              	18.10%
Bootstrap support for J3KLG3 as seed ortholog is 94%.
Bootstrap support for Q29ML9 as seed ortholog is 100%.

Group of orthologs #1894. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3KCQ9              	100.00%		B5DIX0              	100.00%
Bootstrap support for J3KCQ9 as seed ortholog is 100%.
Bootstrap support for B5DIX0 as seed ortholog is 100%.

Group of orthologs #1895. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3KCJ5              	100.00%		B5E0K9              	100.00%
Bootstrap support for J3KCJ5 as seed ortholog is 100%.
Bootstrap support for B5E0K9 as seed ortholog is 100%.

Group of orthologs #1896. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3K841              	100.00%		Q297L0              	100.00%
Bootstrap support for J3K841 as seed ortholog is 100%.
Bootstrap support for Q297L0 as seed ortholog is 100%.

Group of orthologs #1897. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3KJH7              	100.00%		Q293X0              	100.00%
Bootstrap support for J3KJH7 as seed ortholog is 100%.
Bootstrap support for Q293X0 as seed ortholog is 100%.

Group of orthologs #1898. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3K7P8              	100.00%		Q29KY1              	100.00%
Bootstrap support for J3K7P8 as seed ortholog is 100%.
Bootstrap support for Q29KY1 as seed ortholog is 100%.

Group of orthologs #1899. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

Q1E7S5              	100.00%		Q293R2              	100.00%
Bootstrap support for Q1E7S5 as seed ortholog is 100%.
Bootstrap support for Q293R2 as seed ortholog is 100%.

Group of orthologs #1900. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3KDK2              	100.00%		Q29HR8              	100.00%
Bootstrap support for J3KDK2 as seed ortholog is 100%.
Bootstrap support for Q29HR8 as seed ortholog is 100%.

Group of orthologs #1901. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 D.pseudoobscura:87

J3KLR0              	100.00%		Q29MC8              	100.00%
Bootstrap support for J3KLR0 as seed ortholog is 100%.
Bootstrap support for Q29MC8 as seed ortholog is 100%.

Group of orthologs #1902. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3K601              	100.00%		Q28ZG6              	100.00%
I9XM42              	10.55%		B5E1E9              	30.95%
                    	       		Q29F26              	23.07%
                    	       		Q29F28              	19.91%
                    	       		Q29F29              	15.76%
                    	       		Q29F25              	11.60%
                    	       		Q29F27              	10.32%
Bootstrap support for J3K601 as seed ortholog is 100%.
Bootstrap support for Q28ZG6 as seed ortholog is 100%.

Group of orthologs #1903. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3KIT7              	100.00%		B5DNL7              	100.00%
J3K6H0              	6.00%		Q291C8              	50.28%
Bootstrap support for J3KIT7 as seed ortholog is 100%.
Bootstrap support for B5DNL7 as seed ortholog is 100%.

Group of orthologs #1904. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

I9XL36              	100.00%		Q296P2              	100.00%
                    	       		B5DMT4              	8.79%
Bootstrap support for I9XL36 as seed ortholog is 100%.
Bootstrap support for Q296P2 as seed ortholog is 100%.

Group of orthologs #1905. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:27 D.pseudoobscura:35

J3K4I0              	100.00%		Q29MS4              	100.00%
                    	       		Q29IR5              	5.12%
Bootstrap support for J3K4I0 as seed ortholog is 77%.
Bootstrap support for Q29MS4 as seed ortholog is 79%.

Group of orthologs #1906. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:35 D.pseudoobscura:32

I9NNF2              	100.00%		Q291D2              	100.00%
Bootstrap support for I9NNF2 as seed ortholog is 91%.
Bootstrap support for Q291D2 as seed ortholog is 92%.

Group of orthologs #1907. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

I9NMK7              	100.00%		Q29BU2              	100.00%
Bootstrap support for I9NMK7 as seed ortholog is 100%.
Bootstrap support for Q29BU2 as seed ortholog is 100%.

Group of orthologs #1908. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3K2L5              	100.00%		Q29AM8              	100.00%
Bootstrap support for J3K2L5 as seed ortholog is 100%.
Bootstrap support for Q29AM8 as seed ortholog is 100%.

Group of orthologs #1909. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:12

J0HHA7              	100.00%		Q29LB0              	100.00%
Bootstrap support for J0HHA7 as seed ortholog is 100%.
Bootstrap support for Q29LB0 as seed ortholog is 63%.
Alternative seed ortholog is Q29I72 (12 bits away from this cluster)

Group of orthologs #1910. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3KBL2              	100.00%		Q29AL3              	100.00%
Bootstrap support for J3KBL2 as seed ortholog is 100%.
Bootstrap support for Q29AL3 as seed ortholog is 100%.

Group of orthologs #1911. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3KJX5              	100.00%		Q298I8              	100.00%
Bootstrap support for J3KJX5 as seed ortholog is 100%.
Bootstrap support for Q298I8 as seed ortholog is 100%.

Group of orthologs #1912. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3K751              	100.00%		Q2M174              	100.00%
Bootstrap support for J3K751 as seed ortholog is 100%.
Bootstrap support for Q2M174 as seed ortholog is 100%.

Group of orthologs #1913. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

J3KI05              	100.00%		Q2LZ72              	100.00%
Bootstrap support for J3KI05 as seed ortholog is 100%.
Bootstrap support for Q2LZ72 as seed ortholog is 100%.

Group of orthologs #1914. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 D.pseudoobscura:86

Q1DP17              	100.00%		Q3MQ15              	100.00%
Bootstrap support for Q1DP17 as seed ortholog is 100%.
Bootstrap support for Q3MQ15 as seed ortholog is 100%.

Group of orthologs #1915. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 D.pseudoobscura:85

J3K3H2              	100.00%		Q29IW1              	100.00%
                    	       		B5DH31              	11.11%
Bootstrap support for J3K3H2 as seed ortholog is 100%.
Bootstrap support for Q29IW1 as seed ortholog is 100%.

Group of orthologs #1916. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 D.pseudoobscura:85

J3K859              	100.00%		Q28ZZ5              	100.00%
Bootstrap support for J3K859 as seed ortholog is 100%.
Bootstrap support for Q28ZZ5 as seed ortholog is 100%.

Group of orthologs #1917. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 D.pseudoobscura:85

J3K9Y6              	100.00%		Q29JW8              	100.00%
Bootstrap support for J3K9Y6 as seed ortholog is 100%.
Bootstrap support for Q29JW8 as seed ortholog is 100%.

Group of orthologs #1918. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 D.pseudoobscura:85

J3KDT5              	100.00%		Q29KQ8              	100.00%
Bootstrap support for J3KDT5 as seed ortholog is 100%.
Bootstrap support for Q29KQ8 as seed ortholog is 100%.

Group of orthologs #1919. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 D.pseudoobscura:85

Q1E910              	100.00%		Q29LB4              	100.00%
Bootstrap support for Q1E910 as seed ortholog is 100%.
Bootstrap support for Q29LB4 as seed ortholog is 100%.

Group of orthologs #1920. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3KLE6              	100.00%		Q298A7              	100.00%
                    	       		Q298A8              	100.00%
                    	       		Q29L73              	46.62%
                    	       		Q298U7              	34.73%
                    	       		Q298U6              	31.83%
                    	       		Q298A6              	29.58%
                    	       		Q29LF6              	14.15%
Bootstrap support for J3KLE6 as seed ortholog is 100%.
Bootstrap support for Q298A7 as seed ortholog is 100%.
Bootstrap support for Q298A8 as seed ortholog is 100%.

Group of orthologs #1921. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3K997              	100.00%		Q29LT7              	100.00%
                    	       		Q29LT6              	46.62%
Bootstrap support for J3K997 as seed ortholog is 100%.
Bootstrap support for Q29LT7 as seed ortholog is 100%.

Group of orthologs #1922. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:40

J3KKP7              	100.00%		Q29FF8              	100.00%
J3K9D4              	6.46%		
Bootstrap support for J3KKP7 as seed ortholog is 100%.
Bootstrap support for Q29FF8 as seed ortholog is 90%.

Group of orthologs #1923. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J0HDK9              	100.00%		B5DK40              	100.00%
Bootstrap support for J0HDK9 as seed ortholog is 100%.
Bootstrap support for B5DK40 as seed ortholog is 100%.

Group of orthologs #1924. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3KCV0              	100.00%		B5DLR0              	100.00%
Bootstrap support for J3KCV0 as seed ortholog is 100%.
Bootstrap support for B5DLR0 as seed ortholog is 100%.

Group of orthologs #1925. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3K0B5              	100.00%		Q294E0              	100.00%
Bootstrap support for J3K0B5 as seed ortholog is 100%.
Bootstrap support for Q294E0 as seed ortholog is 100%.

Group of orthologs #1926. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3K4S8              	100.00%		Q293M1              	100.00%
Bootstrap support for J3K4S8 as seed ortholog is 100%.
Bootstrap support for Q293M1 as seed ortholog is 100%.

Group of orthologs #1927. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3KB68              	100.00%		I5ANI6              	100.00%
Bootstrap support for J3KB68 as seed ortholog is 100%.
Bootstrap support for I5ANI6 as seed ortholog is 100%.

Group of orthologs #1928. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 D.pseudoobscura:84

J3K8Z4              	100.00%		Q29AH3              	100.00%
Bootstrap support for J3K8Z4 as seed ortholog is 100%.
Bootstrap support for Q29AH3 as seed ortholog is 100%.

Group of orthologs #1929. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:16 D.pseudoobscura:83

J3K4P5              	100.00%		Q29M05              	100.00%
J3KJQ6              	100.00%		
J3K360              	20.13%		
J3K2D5              	12.82%		
Bootstrap support for J3K4P5 as seed ortholog is 63%.
Alternative seed ortholog is J3K991 (16 bits away from this cluster)
Bootstrap support for J3KJQ6 as seed ortholog is 67%.
Alternative seed ortholog is J3K991 (16 bits away from this cluster)
Bootstrap support for Q29M05 as seed ortholog is 100%.

Group of orthologs #1930. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:83

J3K978              	100.00%		I5APV6              	100.00%
                    	       		B5DTW8              	8.37%
Bootstrap support for J3K978 as seed ortholog is 100%.
Bootstrap support for I5APV6 as seed ortholog is 100%.

Group of orthologs #1931. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:83

J3KHX9              	100.00%		B5DLB3              	100.00%
Bootstrap support for J3KHX9 as seed ortholog is 100%.
Bootstrap support for B5DLB3 as seed ortholog is 100%.

Group of orthologs #1932. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:4 D.pseudoobscura:83

J3K0V3              	100.00%		Q293K7              	100.00%
Bootstrap support for J3K0V3 as seed ortholog is 63%.
Alternative seed ortholog is J3K9P8 (4 bits away from this cluster)
Bootstrap support for Q293K7 as seed ortholog is 100%.

Group of orthologs #1933. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:83

J3KMC6              	100.00%		Q29CK4              	100.00%
Bootstrap support for J3KMC6 as seed ortholog is 100%.
Bootstrap support for Q29CK4 as seed ortholog is 100%.

Group of orthologs #1934. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:83

J3KGK2              	100.00%		Q29J68              	100.00%
Bootstrap support for J3KGK2 as seed ortholog is 100%.
Bootstrap support for Q29J68 as seed ortholog is 100%.

Group of orthologs #1935. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 D.pseudoobscura:83

J3KB62              	100.00%		Q8I1E4              	100.00%
Bootstrap support for J3KB62 as seed ortholog is 100%.
Bootstrap support for Q8I1E4 as seed ortholog is 100%.

Group of orthologs #1936. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:82

J3K346              	100.00%		Q29M90              	100.00%
                    	       		B5DV52              	94.90%
Bootstrap support for J3K346 as seed ortholog is 100%.
Bootstrap support for Q29M90 as seed ortholog is 100%.

Group of orthologs #1937. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:82

J3KD44              	100.00%		B5DYL2              	100.00%
Bootstrap support for J3KD44 as seed ortholog is 100%.
Bootstrap support for B5DYL2 as seed ortholog is 100%.

Group of orthologs #1938. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:37 D.pseudoobscura:82

J3KES6              	100.00%		B5DX84              	100.00%
Bootstrap support for J3KES6 as seed ortholog is 72%.
Alternative seed ortholog is J3KBI2 (37 bits away from this cluster)
Bootstrap support for B5DX84 as seed ortholog is 100%.

Group of orthologs #1939. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:82

J3K8W0              	100.00%		Q290Y9              	100.00%
Bootstrap support for J3K8W0 as seed ortholog is 100%.
Bootstrap support for Q290Y9 as seed ortholog is 100%.

Group of orthologs #1940. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:82

J3KFQ4              	100.00%		Q294Y5              	100.00%
Bootstrap support for J3KFQ4 as seed ortholog is 100%.
Bootstrap support for Q294Y5 as seed ortholog is 100%.

Group of orthologs #1941. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:82

J3KCG3              	100.00%		Q29NK5              	100.00%
Bootstrap support for J3KCG3 as seed ortholog is 100%.
Bootstrap support for Q29NK5 as seed ortholog is 100%.

Group of orthologs #1942. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 D.pseudoobscura:82

Q1DTI4              	100.00%		Q2LZH8              	100.00%
Bootstrap support for Q1DTI4 as seed ortholog is 100%.
Bootstrap support for Q2LZH8 as seed ortholog is 100%.

Group of orthologs #1943. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:37 D.pseudoobscura:81

J3KLT4              	100.00%		Q2LZF5              	100.00%
                    	       		B5DPX1              	43.93%
                    	       		Q2LZF4              	39.95%
                    	       		Q2LZF3              	39.72%
                    	       		B5DPX2              	35.05%
Bootstrap support for J3KLT4 as seed ortholog is 86%.
Bootstrap support for Q2LZF5 as seed ortholog is 100%.

Group of orthologs #1944. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KCH2              	100.00%		Q08470              	100.00%
                    	       		B5DKY7              	7.87%
Bootstrap support for J3KCH2 as seed ortholog is 100%.
Bootstrap support for Q08470 as seed ortholog is 100%.

Group of orthologs #1945. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KA75              	100.00%		B5DQY2              	100.00%
Bootstrap support for J3KA75 as seed ortholog is 100%.
Bootstrap support for B5DQY2 as seed ortholog is 100%.

Group of orthologs #1946. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3K2W4              	100.00%		Q28ZF9              	100.00%
Bootstrap support for J3K2W4 as seed ortholog is 100%.
Bootstrap support for Q28ZF9 as seed ortholog is 100%.

Group of orthologs #1947. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3K0L3              	100.00%		Q295W5              	100.00%
Bootstrap support for J3K0L3 as seed ortholog is 100%.
Bootstrap support for Q295W5 as seed ortholog is 100%.

Group of orthologs #1948. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:19 D.pseudoobscura:81

J3K6F0              	100.00%		Q29BR3              	100.00%
Bootstrap support for J3K6F0 as seed ortholog is 69%.
Alternative seed ortholog is J3KH41 (19 bits away from this cluster)
Bootstrap support for Q29BR3 as seed ortholog is 100%.

Group of orthologs #1949. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KG62              	100.00%		Q28ZP5              	100.00%
Bootstrap support for J3KG62 as seed ortholog is 100%.
Bootstrap support for Q28ZP5 as seed ortholog is 100%.

Group of orthologs #1950. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KF14              	100.00%		Q292C1              	100.00%
Bootstrap support for J3KF14 as seed ortholog is 100%.
Bootstrap support for Q292C1 as seed ortholog is 100%.

Group of orthologs #1951. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KHE2              	100.00%		Q292J2              	100.00%
Bootstrap support for J3KHE2 as seed ortholog is 100%.
Bootstrap support for Q292J2 as seed ortholog is 100%.

Group of orthologs #1952. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KMC7              	100.00%		Q28ZU9              	100.00%
Bootstrap support for J3KMC7 as seed ortholog is 100%.
Bootstrap support for Q28ZU9 as seed ortholog is 100%.

Group of orthologs #1953. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KL72              	100.00%		Q297L3              	100.00%
Bootstrap support for J3KL72 as seed ortholog is 100%.
Bootstrap support for Q297L3 as seed ortholog is 100%.

Group of orthologs #1954. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 D.pseudoobscura:81

J3KCG9              	100.00%		Q2LZ85              	100.00%
Bootstrap support for J3KCG9 as seed ortholog is 100%.
Bootstrap support for Q2LZ85 as seed ortholog is 100%.

Group of orthologs #1955. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:80

J3KDA0              	100.00%		Q29G91              	100.00%
                    	       		B5DJE0              	34.17%
Bootstrap support for J3KDA0 as seed ortholog is 100%.
Bootstrap support for Q29G91 as seed ortholog is 100%.

Group of orthologs #1956. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:80

J3K2C2              	100.00%		B5DLE6              	100.00%
Bootstrap support for J3K2C2 as seed ortholog is 100%.
Bootstrap support for B5DLE6 as seed ortholog is 100%.

Group of orthologs #1957. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:80

J3KDQ4              	100.00%		Q297E5              	100.00%
Bootstrap support for J3KDQ4 as seed ortholog is 100%.
Bootstrap support for Q297E5 as seed ortholog is 100%.

Group of orthologs #1958. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:80

J3K3Q8              	100.00%		Q2LYQ4              	100.00%
Bootstrap support for J3K3Q8 as seed ortholog is 100%.
Bootstrap support for Q2LYQ4 as seed ortholog is 100%.

Group of orthologs #1959. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:80

J3KD85              	100.00%		Q29GE1              	100.00%
Bootstrap support for J3KD85 as seed ortholog is 100%.
Bootstrap support for Q29GE1 as seed ortholog is 100%.

Group of orthologs #1960. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 D.pseudoobscura:80

J3K3V8              	100.00%		Q8I1E5              	100.00%
Bootstrap support for J3K3V8 as seed ortholog is 100%.
Bootstrap support for Q8I1E5 as seed ortholog is 100%.

Group of orthologs #1961. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:10 D.pseudoobscura:79

J3K6U3              	100.00%		Q29CL1              	100.00%
                    	       		Q2M0H7              	7.58%
                    	       		Q297N9              	7.37%
                    	       		Q2M0H8              	7.37%
                    	       		Q2LZQ1              	6.74%
Bootstrap support for J3K6U3 as seed ortholog is 56%.
Alternative seed ortholog is J3K0J7 (10 bits away from this cluster)
Bootstrap support for Q29CL1 as seed ortholog is 100%.

Group of orthologs #1962. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3K6I6              	100.00%		B5DI01              	100.00%
Bootstrap support for J3K6I6 as seed ortholog is 100%.
Bootstrap support for B5DI01 as seed ortholog is 100%.

Group of orthologs #1963. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

I9NSI6              	100.00%		Q291R9              	100.00%
Bootstrap support for I9NSI6 as seed ortholog is 100%.
Bootstrap support for Q291R9 as seed ortholog is 100%.

Group of orthologs #1964. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3K087              	100.00%		Q29D01              	100.00%
Bootstrap support for J3K087 as seed ortholog is 100%.
Bootstrap support for Q29D01 as seed ortholog is 100%.

Group of orthologs #1965. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3K2E4              	100.00%		Q29DJ3              	100.00%
Bootstrap support for J3K2E4 as seed ortholog is 100%.
Bootstrap support for Q29DJ3 as seed ortholog is 100%.

Group of orthologs #1966. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KCE0              	100.00%		Q290Q3              	100.00%
Bootstrap support for J3KCE0 as seed ortholog is 100%.
Bootstrap support for Q290Q3 as seed ortholog is 100%.

Group of orthologs #1967. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J0HHI9              	100.00%		Q29M37              	100.00%
Bootstrap support for J0HHI9 as seed ortholog is 100%.
Bootstrap support for Q29M37 as seed ortholog is 100%.

Group of orthologs #1968. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KLJ4              	100.00%		I5AP82              	100.00%
Bootstrap support for J3KLJ4 as seed ortholog is 100%.
Bootstrap support for I5AP82 as seed ortholog is 100%.

Group of orthologs #1969. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KK69              	100.00%		Q292P0              	100.00%
Bootstrap support for J3KK69 as seed ortholog is 100%.
Bootstrap support for Q292P0 as seed ortholog is 100%.

Group of orthologs #1970. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KFD3              	100.00%		Q29CK2              	100.00%
Bootstrap support for J3KFD3 as seed ortholog is 100%.
Bootstrap support for Q29CK2 as seed ortholog is 100%.

Group of orthologs #1971. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3K7U8              	100.00%		Q29N97              	100.00%
Bootstrap support for J3K7U8 as seed ortholog is 100%.
Bootstrap support for Q29N97 as seed ortholog is 100%.

Group of orthologs #1972. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KD25              	100.00%		Q29JG5              	100.00%
Bootstrap support for J3KD25 as seed ortholog is 100%.
Bootstrap support for Q29JG5 as seed ortholog is 100%.

Group of orthologs #1973. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KHX6              	100.00%		Q29G22              	100.00%
Bootstrap support for J3KHX6 as seed ortholog is 100%.
Bootstrap support for Q29G22 as seed ortholog is 100%.

Group of orthologs #1974. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:20

J3KGX2              	100.00%		Q29IU5              	100.00%
Bootstrap support for J3KGX2 as seed ortholog is 100%.
Bootstrap support for Q29IU5 as seed ortholog is 92%.

Group of orthologs #1975. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KLT2              	100.00%		Q29JQ2              	100.00%
Bootstrap support for J3KLT2 as seed ortholog is 100%.
Bootstrap support for Q29JQ2 as seed ortholog is 100%.

Group of orthologs #1976. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 D.pseudoobscura:79

J3KKG2              	100.00%		Q29LQ3              	100.00%
Bootstrap support for J3KKG2 as seed ortholog is 100%.
Bootstrap support for Q29LQ3 as seed ortholog is 100%.

Group of orthologs #1977. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 D.pseudoobscura:78

I9XJE1              	100.00%		Q29EM5              	100.00%
Bootstrap support for I9XJE1 as seed ortholog is 100%.
Bootstrap support for Q29EM5 as seed ortholog is 100%.

Group of orthologs #1978. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 D.pseudoobscura:78

J3KGL2              	100.00%		Q290L7              	100.00%
Bootstrap support for J3KGL2 as seed ortholog is 100%.
Bootstrap support for Q290L7 as seed ortholog is 100%.

Group of orthologs #1979. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 D.pseudoobscura:78

J3K8A3              	100.00%		Q29P25              	100.00%
Bootstrap support for J3K8A3 as seed ortholog is 100%.
Bootstrap support for Q29P25 as seed ortholog is 100%.

Group of orthologs #1980. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 D.pseudoobscura:78

J3KDQ9              	100.00%		Q29KT3              	100.00%
Bootstrap support for J3KDQ9 as seed ortholog is 100%.
Bootstrap support for Q29KT3 as seed ortholog is 100%.

Group of orthologs #1981. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 D.pseudoobscura:78

J3K7S3              	100.00%		Q8I1C0              	100.00%
Bootstrap support for J3K7S3 as seed ortholog is 100%.
Bootstrap support for Q8I1C0 as seed ortholog is 100%.

Group of orthologs #1982. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

I9NTC2              	100.00%		Q28XR2              	100.00%
                    	       		Q2M0E0              	51.25%
Bootstrap support for I9NTC2 as seed ortholog is 100%.
Bootstrap support for Q28XR2 as seed ortholog is 100%.

Group of orthologs #1983. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3KCS9              	100.00%		Q29HW2              	100.00%
                    	       		Q29HW1              	23.61%
Bootstrap support for J3KCS9 as seed ortholog is 100%.
Bootstrap support for Q29HW2 as seed ortholog is 100%.

Group of orthologs #1984. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3K0Q2              	100.00%		B5DUR2              	100.00%
Bootstrap support for J3K0Q2 as seed ortholog is 100%.
Bootstrap support for B5DUR2 as seed ortholog is 100%.

Group of orthologs #1985. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3KAW4              	100.00%		B5DK84              	100.00%
Bootstrap support for J3KAW4 as seed ortholog is 100%.
Bootstrap support for B5DK84 as seed ortholog is 100%.

Group of orthologs #1986. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3K0S5              	100.00%		B5DVV7              	100.00%
Bootstrap support for J3K0S5 as seed ortholog is 100%.
Bootstrap support for B5DVV7 as seed ortholog is 100%.

Group of orthologs #1987. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3KAD3              	100.00%		B5E1A4              	100.00%
Bootstrap support for J3KAD3 as seed ortholog is 100%.
Bootstrap support for B5E1A4 as seed ortholog is 100%.

Group of orthologs #1988. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3K446              	100.00%		Q299H9              	100.00%
Bootstrap support for J3K446 as seed ortholog is 100%.
Bootstrap support for Q299H9 as seed ortholog is 100%.

Group of orthologs #1989. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3KEU8              	100.00%		Q293G2              	100.00%
Bootstrap support for J3KEU8 as seed ortholog is 100%.
Bootstrap support for Q293G2 as seed ortholog is 100%.

Group of orthologs #1990. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3K6P5              	100.00%		Q29LZ4              	100.00%
Bootstrap support for J3K6P5 as seed ortholog is 100%.
Bootstrap support for Q29LZ4 as seed ortholog is 100%.

Group of orthologs #1991. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3K2L6              	100.00%		Q2M1D7              	100.00%
Bootstrap support for J3K2L6 as seed ortholog is 100%.
Bootstrap support for Q2M1D7 as seed ortholog is 100%.

Group of orthologs #1992. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3K8U2              	100.00%		Q2M0Y2              	100.00%
Bootstrap support for J3K8U2 as seed ortholog is 100%.
Bootstrap support for Q2M0Y2 as seed ortholog is 100%.

Group of orthologs #1993. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 D.pseudoobscura:77

J3KLP6              	100.00%		Q2M0W4              	100.00%
Bootstrap support for J3KLP6 as seed ortholog is 100%.
Bootstrap support for Q2M0W4 as seed ortholog is 100%.

Group of orthologs #1994. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3KF81              	100.00%		B5DP70              	100.00%
                    	       		Q299V5              	37.75%
                    	       		B5DVK7              	21.19%
Bootstrap support for J3KF81 as seed ortholog is 100%.
Bootstrap support for B5DP70 as seed ortholog is 100%.

Group of orthologs #1995. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:11 D.pseudoobscura:76

J3K141              	100.00%		Q29MJ8              	100.00%
                    	       		Q29MK2              	22.95%
                    	       		Q296T0              	9.25%
Bootstrap support for J3K141 as seed ortholog is 72%.
Alternative seed ortholog is J3K9W8 (11 bits away from this cluster)
Bootstrap support for Q29MJ8 as seed ortholog is 100%.

Group of orthologs #1996. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:16

J3K522              	100.00%		B5DJ15              	100.00%
                    	       		B5DJ11              	97.48%
Bootstrap support for J3K522 as seed ortholog is 100%.
Bootstrap support for B5DJ15 as seed ortholog is 64%.
Alternative seed ortholog is Q29M85 (16 bits away from this cluster)

Group of orthologs #1997. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3K6V9              	100.00%		Q29HL6              	100.00%
                    	       		Q29DV6              	22.35%
Bootstrap support for J3K6V9 as seed ortholog is 100%.
Bootstrap support for Q29HL6 as seed ortholog is 100%.

Group of orthologs #1998. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:13

I9NTA6              	100.00%		B5E0Q3              	100.00%
Bootstrap support for I9NTA6 as seed ortholog is 100%.
Bootstrap support for B5E0Q3 as seed ortholog is 54%.
Alternative seed ortholog is Q29DT1 (13 bits away from this cluster)

Group of orthologs #1999. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3K0B3              	100.00%		Q298Q7              	100.00%
Bootstrap support for J3K0B3 as seed ortholog is 100%.
Bootstrap support for Q298Q7 as seed ortholog is 100%.

Group of orthologs #2000. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3KJ20              	100.00%		Q28WR4              	100.00%
Bootstrap support for J3KJ20 as seed ortholog is 100%.
Bootstrap support for Q28WR4 as seed ortholog is 100%.

Group of orthologs #2001. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

I9XIT8              	100.00%		Q2LYV9              	100.00%
Bootstrap support for I9XIT8 as seed ortholog is 100%.
Bootstrap support for Q2LYV9 as seed ortholog is 100%.

Group of orthologs #2002. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:6

J3KA46              	100.00%		Q29F00              	100.00%
Bootstrap support for J3KA46 as seed ortholog is 100%.
Bootstrap support for Q29F00 as seed ortholog is 63%.
Alternative seed ortholog is Q28X08 (6 bits away from this cluster)

Group of orthologs #2003. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

P0CH94              	100.00%		Q292P3              	100.00%
Bootstrap support for P0CH94 as seed ortholog is 100%.
Bootstrap support for Q292P3 as seed ortholog is 100%.

Group of orthologs #2004. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3KCY4              	100.00%		Q29M94              	100.00%
Bootstrap support for J3KCY4 as seed ortholog is 100%.
Bootstrap support for Q29M94 as seed ortholog is 100%.

Group of orthologs #2005. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3KJH6              	100.00%		Q29GX6              	100.00%
Bootstrap support for J3KJH6 as seed ortholog is 100%.
Bootstrap support for Q29GX6 as seed ortholog is 100%.

Group of orthologs #2006. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 D.pseudoobscura:76

J3KJY5              	100.00%		Q2LZ31              	100.00%
Bootstrap support for J3KJY5 as seed ortholog is 100%.
Bootstrap support for Q2LZ31 as seed ortholog is 100%.

Group of orthologs #2007. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:75

J0HHD6              	100.00%		Q29J09              	100.00%
                    	       		Q29J07              	43.81%
                    	       		Q296A0              	31.11%
Bootstrap support for J0HHD6 as seed ortholog is 100%.
Bootstrap support for Q29J09 as seed ortholog is 100%.

Group of orthologs #2008. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:75

J3K4S5              	100.00%		Q29GN7              	100.00%
Bootstrap support for J3K4S5 as seed ortholog is 100%.
Bootstrap support for Q29GN7 as seed ortholog is 100%.

Group of orthologs #2009. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 D.pseudoobscura:75

J3KHI2              	100.00%		Q29F14              	100.00%
Bootstrap support for J3KHI2 as seed ortholog is 100%.
Bootstrap support for Q29F14 as seed ortholog is 100%.

Group of orthologs #2010. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 D.pseudoobscura:74

J3K0W4              	100.00%		Q296Z3              	100.00%
Bootstrap support for J3K0W4 as seed ortholog is 100%.
Bootstrap support for Q296Z3 as seed ortholog is 100%.

Group of orthologs #2011. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 D.pseudoobscura:74

J3KHL1              	100.00%		Q29E01              	100.00%
Bootstrap support for J3KHL1 as seed ortholog is 100%.
Bootstrap support for Q29E01 as seed ortholog is 100%.

Group of orthologs #2012. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 D.pseudoobscura:74

J3KHK5              	100.00%		Q29EQ2              	100.00%
Bootstrap support for J3KHK5 as seed ortholog is 100%.
Bootstrap support for Q29EQ2 as seed ortholog is 100%.

Group of orthologs #2013. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 D.pseudoobscura:74

J3KKN3              	100.00%		Q29KS3              	100.00%
Bootstrap support for J3KKN3 as seed ortholog is 100%.
Bootstrap support for Q29KS3 as seed ortholog is 100%.

Group of orthologs #2014. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:28 D.pseudoobscura:73

J3K6H5              	100.00%		Q29FB3              	100.00%
                    	       		Q29FB2              	28.38%
                    	       		B5DP64              	20.72%
Bootstrap support for J3K6H5 as seed ortholog is 90%.
Bootstrap support for Q29FB3 as seed ortholog is 100%.

Group of orthologs #2015. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 D.pseudoobscura:73

J3K029              	100.00%		Q290I4              	100.00%
                    	       		B5DRP8              	31.02%
Bootstrap support for J3K029 as seed ortholog is 100%.
Bootstrap support for Q290I4 as seed ortholog is 100%.

Group of orthologs #2016. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 D.pseudoobscura:73

J3K1W7              	100.00%		Q299N7              	100.00%
Bootstrap support for J3K1W7 as seed ortholog is 100%.
Bootstrap support for Q299N7 as seed ortholog is 100%.

Group of orthologs #2017. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 D.pseudoobscura:73

J3K9X7              	100.00%		Q298V0              	100.00%
Bootstrap support for J3K9X7 as seed ortholog is 100%.
Bootstrap support for Q298V0 as seed ortholog is 100%.

Group of orthologs #2018. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 D.pseudoobscura:73

J3K2J2              	100.00%		Q29MZ0              	100.00%
Bootstrap support for J3K2J2 as seed ortholog is 100%.
Bootstrap support for Q29MZ0 as seed ortholog is 100%.

Group of orthologs #2019. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 D.pseudoobscura:17

J3K1Y1              	100.00%		Q29P64              	100.00%
Bootstrap support for J3K1Y1 as seed ortholog is 100%.
Bootstrap support for Q29P64 as seed ortholog is 76%.

Group of orthologs #2020. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J0HEX3              	100.00%		B5DXY7              	100.00%
                    	       		B5DJA3              	19.92%
                    	       		B5DKC9              	17.98%
                    	       		B5DHW8              	17.59%
                    	       		B5DJ65              	16.95%
                    	       		B5DJ99              	15.91%
                    	       		B5DR35              	15.39%
                    	       		B5DKC8              	13.84%
                    	       		Q295P5              	12.42%
                    	       		Q29K11              	11.51%
                    	       		Q28ZE4              	11.25%
                    	       		B5DM66              	10.87%
                    	       		B5DM67              	10.48%
                    	       		B5DKD0              	9.96%
                    	       		Q2M0A4              	9.83%
                    	       		Q29M97              	8.02%
                    	       		Q294E4              	8.02%
                    	       		Q29BM8              	7.24%
                    	       		B5DLH3              	6.73%
                    	       		Q295U2              	6.73%
                    	       		Q291K7              	5.95%
                    	       		Q28WY1              	5.69%
                    	       		Q29HD6              	5.69%
                    	       		I5AMP2              	5.56%
                    	       		Q29GY5              	5.43%
                    	       		Q29PF9              	5.43%
                    	       		Q293X7              	5.17%
                    	       		Q29HD4              	5.17%
                    	       		Q29BE5              	5.05%
                    	       		Q294E1              	5.05%
                    	       		Q294K2              	5.05%
                    	       		Q295I6              	5.05%
Bootstrap support for J0HEX3 as seed ortholog is 100%.
Bootstrap support for B5DXY7 as seed ortholog is 100%.

Group of orthologs #2021. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:8 D.pseudoobscura:72

J3KGI9              	100.00%		Q2LZ14              	100.00%
J3K2C0              	25.51%		Q2M0P8              	45.45%
J3KAP6              	24.86%		Q2M1B3              	39.79%
J3K470              	24.22%		Q29HX8              	31.65%
J3K7G3              	23.94%		Q2LYJ7              	30.27%
J3KFV8              	19.98%		
J3KIQ4              	19.98%		
J3KI26              	19.61%		
J3K109              	19.06%		
J3K9B5              	18.69%		
I9NTJ5              	17.31%		
J0HDT6              	9.39%		
J3KB50              	7.73%		
Bootstrap support for J3KGI9 as seed ortholog is 59%.
Alternative seed ortholog is J3K5T7 (8 bits away from this cluster)
Bootstrap support for Q2LZ14 as seed ortholog is 100%.

Group of orthologs #2022. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

I9NSM1              	100.00%		B5DI31              	100.00%
Bootstrap support for I9NSM1 as seed ortholog is 100%.
Bootstrap support for B5DI31 as seed ortholog is 100%.

Group of orthologs #2023. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

I9NL72              	100.00%		B5DWP2              	100.00%
Bootstrap support for I9NL72 as seed ortholog is 100%.
Bootstrap support for B5DWP2 as seed ortholog is 100%.

Group of orthologs #2024. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3K6L9              	100.00%		B5DK42              	100.00%
Bootstrap support for J3K6L9 as seed ortholog is 100%.
Bootstrap support for B5DK42 as seed ortholog is 100%.

Group of orthologs #2025. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J0HE53              	100.00%		B5DVG5              	100.00%
Bootstrap support for J0HE53 as seed ortholog is 100%.
Bootstrap support for B5DVG5 as seed ortholog is 100%.

Group of orthologs #2026. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3K0Y1              	100.00%		Q292Q8              	100.00%
Bootstrap support for J3K0Y1 as seed ortholog is 100%.
Bootstrap support for Q292Q8 as seed ortholog is 100%.

Group of orthologs #2027. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3K1F4              	100.00%		Q293R4              	100.00%
Bootstrap support for J3K1F4 as seed ortholog is 100%.
Bootstrap support for Q293R4 as seed ortholog is 100%.

Group of orthologs #2028. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J0HH91              	100.00%		Q29CW4              	100.00%
Bootstrap support for J0HH91 as seed ortholog is 100%.
Bootstrap support for Q29CW4 as seed ortholog is 100%.

Group of orthologs #2029. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3KDL7              	100.00%		Q294I2              	100.00%
Bootstrap support for J3KDL7 as seed ortholog is 100%.
Bootstrap support for Q294I2 as seed ortholog is 100%.

Group of orthologs #2030. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3K2P3              	100.00%		Q29IA4              	100.00%
Bootstrap support for J3K2P3 as seed ortholog is 100%.
Bootstrap support for Q29IA4 as seed ortholog is 100%.

Group of orthologs #2031. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3K4K6              	100.00%		Q29JI5              	100.00%
Bootstrap support for J3K4K6 as seed ortholog is 100%.
Bootstrap support for Q29JI5 as seed ortholog is 100%.

Group of orthologs #2032. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3KBB4              	100.00%		Q29GS0              	100.00%
Bootstrap support for J3KBB4 as seed ortholog is 100%.
Bootstrap support for Q29GS0 as seed ortholog is 100%.

Group of orthologs #2033. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3KKN1              	100.00%		Q297N7              	100.00%
Bootstrap support for J3KKN1 as seed ortholog is 100%.
Bootstrap support for Q297N7 as seed ortholog is 100%.

Group of orthologs #2034. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

J3KB72              	100.00%		Q2LZ83              	100.00%
Bootstrap support for J3KB72 as seed ortholog is 100%.
Bootstrap support for Q2LZ83 as seed ortholog is 100%.

Group of orthologs #2035. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 D.pseudoobscura:72

Q1DHE5              	100.00%		Q29ED8              	100.00%
Bootstrap support for Q1DHE5 as seed ortholog is 100%.
Bootstrap support for Q29ED8 as seed ortholog is 100%.

Group of orthologs #2036. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3KL39              	100.00%		B5DPG3              	100.00%
J3K620              	24.05%		
Bootstrap support for J3KL39 as seed ortholog is 100%.
Bootstrap support for B5DPG3 as seed ortholog is 100%.

Group of orthologs #2037. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3K6B0              	100.00%		B5DY07              	100.00%
Bootstrap support for J3K6B0 as seed ortholog is 100%.
Bootstrap support for B5DY07 as seed ortholog is 100%.

Group of orthologs #2038. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3K8U4              	100.00%		Q295B6              	100.00%
Bootstrap support for J3K8U4 as seed ortholog is 100%.
Bootstrap support for Q295B6 as seed ortholog is 100%.

Group of orthologs #2039. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3K4C9              	100.00%		Q29CC9              	100.00%
Bootstrap support for J3K4C9 as seed ortholog is 100%.
Bootstrap support for Q29CC9 as seed ortholog is 100%.

Group of orthologs #2040. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3K9V0              	100.00%		Q29AB1              	100.00%
Bootstrap support for J3K9V0 as seed ortholog is 100%.
Bootstrap support for Q29AB1 as seed ortholog is 100%.

Group of orthologs #2041. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3KHT6              	100.00%		Q297J9              	100.00%
Bootstrap support for J3KHT6 as seed ortholog is 100%.
Bootstrap support for Q297J9 as seed ortholog is 100%.

Group of orthologs #2042. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 D.pseudoobscura:71

J3KI96              	100.00%		Q29ML7              	100.00%
Bootstrap support for J3KI96 as seed ortholog is 100%.
Bootstrap support for Q29ML7 as seed ortholog is 100%.

Group of orthologs #2043. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 D.pseudoobscura:70

J3K1T2              	100.00%		B5DUI5              	100.00%
J3KEF5              	23.45%		Q294U0              	98.24%
Bootstrap support for J3K1T2 as seed ortholog is 100%.
Bootstrap support for B5DUI5 as seed ortholog is 100%.

Group of orthologs #2044. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:14 D.pseudoobscura:70

J3K5K2              	100.00%		Q292M1              	100.00%
Bootstrap support for J3K5K2 as seed ortholog is 74%.
Alternative seed ortholog is J3KD97 (14 bits away from this cluster)
Bootstrap support for Q292M1 as seed ortholog is 100%.

Group of orthologs #2045. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 D.pseudoobscura:70

J3KEM2              	100.00%		Q29LQ1              	100.00%
Bootstrap support for J3KEM2 as seed ortholog is 100%.
Bootstrap support for Q29LQ1 as seed ortholog is 100%.

Group of orthologs #2046. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 D.pseudoobscura:70

J3KHH0              	100.00%		Q2LZZ2              	100.00%
Bootstrap support for J3KHH0 as seed ortholog is 100%.
Bootstrap support for Q2LZZ2 as seed ortholog is 100%.

Group of orthologs #2047. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:69

J3KFE9              	100.00%		Q29HZ7              	100.00%
J3KEG1              	23.52%		Q29PJ2              	18.49%
                    	       		Q29DJ2              	16.54%
                    	       		Q28WQ7              	11.15%
                    	       		Q28ZL2              	10.18%
                    	       		B5E1F5              	9.49%
                    	       		Q28ZL3              	7.63%
Bootstrap support for J3KFE9 as seed ortholog is 100%.
Bootstrap support for Q29HZ7 as seed ortholog is 100%.

Group of orthologs #2048. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:69

J3K271              	100.00%		Q292Y8              	100.00%
J3KKG1              	100.00%		Q295U9              	100.00%
J3KLB7              	24.88%		Q292Y9              	47.65%
Bootstrap support for J3K271 as seed ortholog is 100%.
Bootstrap support for J3KKG1 as seed ortholog is 100%.
Bootstrap support for Q292Y8 as seed ortholog is 100%.
Bootstrap support for Q295U9 as seed ortholog is 100%.

Group of orthologs #2049. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:18

I9XL00              	100.00%		Q292E1              	100.00%
                    	       		Q29FU9              	13.49%
Bootstrap support for I9XL00 as seed ortholog is 100%.
Bootstrap support for Q292E1 as seed ortholog is 70%.
Alternative seed ortholog is B5DRW7 (18 bits away from this cluster)

Group of orthologs #2050. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:15

J3KFX4              	100.00%		Q29DX6              	100.00%
                    	       		B5DIG4              	38.84%
Bootstrap support for J3KFX4 as seed ortholog is 100%.
Bootstrap support for Q29DX6 as seed ortholog is 89%.

Group of orthologs #2051. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:69

I9NKM9              	100.00%		Q295F8              	100.00%
Bootstrap support for I9NKM9 as seed ortholog is 100%.
Bootstrap support for Q295F8 as seed ortholog is 100%.

Group of orthologs #2052. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:69

J3K0V5              	100.00%		Q295B5              	100.00%
Bootstrap support for J3K0V5 as seed ortholog is 100%.
Bootstrap support for Q295B5 as seed ortholog is 100%.

Group of orthologs #2053. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:69

J3KHW4              	100.00%		Q296C6              	100.00%
Bootstrap support for J3KHW4 as seed ortholog is 100%.
Bootstrap support for Q296C6 as seed ortholog is 100%.

Group of orthologs #2054. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 D.pseudoobscura:69

J3KMB8              	100.00%		Q29AH5              	100.00%
Bootstrap support for J3KMB8 as seed ortholog is 100%.
Bootstrap support for Q29AH5 as seed ortholog is 100%.

Group of orthologs #2055. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:68

J3K547              	100.00%		Q2M0T7              	100.00%
                    	       		Q29MW1              	36.11%
                    	       		Q2M0T5              	28.70%
                    	       		B5DQM7              	25.93%
Bootstrap support for J3K547 as seed ortholog is 100%.
Bootstrap support for Q2M0T7 as seed ortholog is 100%.

Group of orthologs #2056. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:6 D.pseudoobscura:68

J3K9S4              	100.00%		B5DJ49              	100.00%
                    	       		Q29NE3              	68.93%
                    	       		B5DJ48              	44.65%
Bootstrap support for J3K9S4 as seed ortholog is 54%.
Alternative seed ortholog is J3K8H5 (6 bits away from this cluster)
Bootstrap support for B5DJ49 as seed ortholog is 100%.

Group of orthologs #2057. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:68

J0HE66              	100.00%		Q29GD4              	100.00%
Bootstrap support for J0HE66 as seed ortholog is 100%.
Bootstrap support for Q29GD4 as seed ortholog is 100%.

Group of orthologs #2058. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:68

J3KGY8              	100.00%		Q28ZE3              	100.00%
Bootstrap support for J3KGY8 as seed ortholog is 100%.
Bootstrap support for Q28ZE3 as seed ortholog is 100%.

Group of orthologs #2059. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:68

J3KDP6              	100.00%		Q29MY6              	100.00%
Bootstrap support for J3KDP6 as seed ortholog is 100%.
Bootstrap support for Q29MY6 as seed ortholog is 100%.

Group of orthologs #2060. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 D.pseudoobscura:68

J3KM34              	100.00%		Q29E85              	100.00%
Bootstrap support for J3KM34 as seed ortholog is 100%.
Bootstrap support for Q29E85 as seed ortholog is 100%.

Group of orthologs #2061. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3K920              	100.00%		Q28WP3              	100.00%
J3K7M1              	100.00%		Q29LH5              	100.00%
J3K1C7              	100.00%		Q28ZI2              	100.00%
J3KJD4              	100.00%		Q29NJ2              	100.00%
J3K5L5              	100.00%		Q29IF4              	100.00%
J3K4A6              	100.00%		B5DHE6              	100.00%
J3K2H7              	100.00%		B5DZN9              	100.00%
J3K8N5              	53.69%		Q292H7              	47.63%
J3KA51              	44.99%		Q291Y2              	43.62%
J3K7U9              	40.49%		Q28YB3              	35.60%
J3KEE9              	38.04%		Q291M5              	34.98%
J3KJX1              	35.03%		Q291M7              	33.02%
J3KI16              	29.14%		B5DZS1              	32.10%
J0HDU4              	28.85%		Q291M4              	31.17%
J3K1Y7              	28.10%		Q29H64              	30.94%
J3K0U0              	27.61%		Q291M6              	30.56%
J0HGN5              	23.52%		B5DVT7              	29.22%
J3KI62              	22.76%		B5DZS0              	26.23%
J3KLF7              	21.00%		Q29MA0              	25.56%
I9NLP7              	20.55%		Q291F1              	24.44%
J3K028              	20.55%		B5DHW7              	23.91%
J3KJ44              	20.34%		Q298B7              	23.87%
J3K9V5              	17.48%		Q29KZ2              	18.84%
J3K3W9              	14.00%		Q299Q0              	9.50%
J3KCM7              	10.34%		Q29LK0              	6.89%
J3K2B2              	9.32%		
Bootstrap support for J3K920 as seed ortholog is 100%.
Bootstrap support for J3K7M1 as seed ortholog is 100%.
Bootstrap support for J3K1C7 as seed ortholog is 100%.
Bootstrap support for J3KJD4 as seed ortholog is 100%.
Bootstrap support for J3K5L5 as seed ortholog is 100%.
Bootstrap support for J3K4A6 as seed ortholog is 100%.
Bootstrap support for J3K2H7 as seed ortholog is 100%.
Bootstrap support for Q28WP3 as seed ortholog is 100%.
Bootstrap support for Q29LH5 as seed ortholog is 100%.
Bootstrap support for Q28ZI2 as seed ortholog is 100%.
Bootstrap support for Q29NJ2 as seed ortholog is 100%.
Bootstrap support for Q29IF4 as seed ortholog is 100%.
Bootstrap support for B5DHE6 as seed ortholog is 100%.
Bootstrap support for B5DZN9 as seed ortholog is 100%.

Group of orthologs #2062. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3K895              	100.00%		B5DVU6              	100.00%
                    	       		B5DLY5              	79.09%
                    	       		B5DVE4              	62.73%
                    	       		B5DXX3              	29.22%
                    	       		B5DYP9              	10.99%
Bootstrap support for J3K895 as seed ortholog is 100%.
Bootstrap support for B5DVU6 as seed ortholog is 100%.

Group of orthologs #2063. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3K5H4              	100.00%		Q294B5              	100.00%
J3K5Z3              	14.52%		
Bootstrap support for J3K5H4 as seed ortholog is 100%.
Bootstrap support for Q294B5 as seed ortholog is 100%.

Group of orthologs #2064. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3K9G9              	100.00%		B5DZG3              	100.00%
Bootstrap support for J3K9G9 as seed ortholog is 100%.
Bootstrap support for B5DZG3 as seed ortholog is 100%.

Group of orthologs #2065. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3KES9              	100.00%		Q291V2              	100.00%
Bootstrap support for J3KES9 as seed ortholog is 100%.
Bootstrap support for Q291V2 as seed ortholog is 100%.

Group of orthologs #2066. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3K0L5              	100.00%		Q29PP9              	100.00%
Bootstrap support for J3K0L5 as seed ortholog is 100%.
Bootstrap support for Q29PP9 as seed ortholog is 100%.

Group of orthologs #2067. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3KBY4              	100.00%		Q29DA2              	100.00%
Bootstrap support for J3KBY4 as seed ortholog is 100%.
Bootstrap support for Q29DA2 as seed ortholog is 100%.

Group of orthologs #2068. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3KH19              	100.00%		Q29FS8              	100.00%
Bootstrap support for J3KH19 as seed ortholog is 100%.
Bootstrap support for Q29FS8 as seed ortholog is 100%.

Group of orthologs #2069. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3KEY1              	100.00%		Q29J48              	100.00%
Bootstrap support for J3KEY1 as seed ortholog is 100%.
Bootstrap support for Q29J48 as seed ortholog is 100%.

Group of orthologs #2070. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 D.pseudoobscura:67

J3KK56              	100.00%		Q29JJ2              	100.00%
Bootstrap support for J3KK56 as seed ortholog is 100%.
Bootstrap support for Q29JJ2 as seed ortholog is 100%.

Group of orthologs #2071. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3KEM3              	100.00%		Q29AP0              	100.00%
                    	       		Q29FE6              	27.04%
Bootstrap support for J3KEM3 as seed ortholog is 100%.
Bootstrap support for Q29AP0 as seed ortholog is 100%.

Group of orthologs #2072. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3KLQ1              	100.00%		Q2M071              	100.00%
                    	       		B5DI45              	50.21%
Bootstrap support for J3KLQ1 as seed ortholog is 100%.
Bootstrap support for Q2M071 as seed ortholog is 100%.

Group of orthologs #2073. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

I9NQ88              	100.00%		B5DP61              	100.00%
Bootstrap support for I9NQ88 as seed ortholog is 100%.
Bootstrap support for B5DP61 as seed ortholog is 100%.

Group of orthologs #2074. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

I9XM46              	100.00%		B5E0I4              	100.00%
Bootstrap support for I9XM46 as seed ortholog is 100%.
Bootstrap support for B5E0I4 as seed ortholog is 100%.

Group of orthologs #2075. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3KL60              	100.00%		B5DR16              	100.00%
Bootstrap support for J3KL60 as seed ortholog is 100%.
Bootstrap support for B5DR16 as seed ortholog is 100%.

Group of orthologs #2076. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3K1C5              	100.00%		Q29I73              	100.00%
Bootstrap support for J3K1C5 as seed ortholog is 100%.
Bootstrap support for Q29I73 as seed ortholog is 100%.

Group of orthologs #2077. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3KKI6              	100.00%		Q28ZY2              	100.00%
Bootstrap support for J3KKI6 as seed ortholog is 100%.
Bootstrap support for Q28ZY2 as seed ortholog is 100%.

Group of orthologs #2078. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3K7W4              	100.00%		Q29NF4              	100.00%
Bootstrap support for J3K7W4 as seed ortholog is 100%.
Bootstrap support for Q29NF4 as seed ortholog is 100%.

Group of orthologs #2079. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3KBX3              	100.00%		Q29M23              	100.00%
Bootstrap support for J3KBX3 as seed ortholog is 100%.
Bootstrap support for Q29M23 as seed ortholog is 100%.

Group of orthologs #2080. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 D.pseudoobscura:66

J3KIP8              	100.00%		Q29IB0              	100.00%
Bootstrap support for J3KIP8 as seed ortholog is 100%.
Bootstrap support for Q29IB0 as seed ortholog is 100%.

Group of orthologs #2081. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:65

J3K6V4              	100.00%		Q2M0R9              	100.00%
                    	       		Q29AD2              	14.29%
                    	       		Q29K70              	12.22%
                    	       		Q28ZR6              	10.48%
                    	       		Q298T1              	10.48%
                    	       		Q29B79              	9.68%
                    	       		B5DNR6              	8.89%
                    	       		B5DYL3              	8.57%
                    	       		Q29GS7              	7.14%
                    	       		Q29CG6              	7.14%
                    	       		B5DMT7              	6.67%
                    	       		B5DHH4              	6.19%
                    	       		Q28XJ3              	5.71%
                    	       		B5DYL4              	5.08%
Bootstrap support for J3K6V4 as seed ortholog is 100%.
Bootstrap support for Q2M0R9 as seed ortholog is 100%.

Group of orthologs #2082. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:65

J3K0Y2              	100.00%		Q29JJ1              	100.00%
                    	       		Q298G5              	9.63%
Bootstrap support for J3K0Y2 as seed ortholog is 100%.
Bootstrap support for Q29JJ1 as seed ortholog is 100%.

Group of orthologs #2083. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:65

J3KBB2              	100.00%		B5DMN1              	100.00%
Bootstrap support for J3KBB2 as seed ortholog is 100%.
Bootstrap support for B5DMN1 as seed ortholog is 100%.

Group of orthologs #2084. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:65

J3K3I7              	100.00%		B5DWF5              	100.00%
Bootstrap support for J3K3I7 as seed ortholog is 100%.
Bootstrap support for B5DWF5 as seed ortholog is 100%.

Group of orthologs #2085. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 D.pseudoobscura:65

J3K4P0              	100.00%		Q29KM5              	100.00%
Bootstrap support for J3K4P0 as seed ortholog is 100%.
Bootstrap support for Q29KM5 as seed ortholog is 100%.

Group of orthologs #2086. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3KE79              	100.00%		Q29MF9              	100.00%
                    	       		Q29MG0              	24.31%
                    	       		B5DNG4              	11.77%
Bootstrap support for J3KE79 as seed ortholog is 100%.
Bootstrap support for Q29MF9 as seed ortholog is 100%.

Group of orthologs #2087. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:16

J3KG91              	100.00%		Q28YH4              	100.00%
J3K806              	11.13%		
Bootstrap support for J3KG91 as seed ortholog is 100%.
Bootstrap support for Q28YH4 as seed ortholog is 92%.

Group of orthologs #2088. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3K8Q6              	100.00%		B5DVY4              	100.00%
Bootstrap support for J3K8Q6 as seed ortholog is 100%.
Bootstrap support for B5DVY4 as seed ortholog is 100%.

Group of orthologs #2089. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3KAW5              	100.00%		Q299C7              	100.00%
Bootstrap support for J3KAW5 as seed ortholog is 100%.
Bootstrap support for Q299C7 as seed ortholog is 100%.

Group of orthologs #2090. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3K8T4              	100.00%		Q29CK7              	100.00%
Bootstrap support for J3K8T4 as seed ortholog is 100%.
Bootstrap support for Q29CK7 as seed ortholog is 100%.

Group of orthologs #2091. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3K2V9              	100.00%		Q29M38              	100.00%
Bootstrap support for J3K2V9 as seed ortholog is 100%.
Bootstrap support for Q29M38 as seed ortholog is 100%.

Group of orthologs #2092. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3K761              	100.00%		Q29LJ7              	100.00%
Bootstrap support for J3K761 as seed ortholog is 100%.
Bootstrap support for Q29LJ7 as seed ortholog is 100%.

Group of orthologs #2093. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3KCQ8              	100.00%		Q29K71              	100.00%
Bootstrap support for J3KCQ8 as seed ortholog is 100%.
Bootstrap support for Q29K71 as seed ortholog is 100%.

Group of orthologs #2094. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3KJY8              	100.00%		Q29HV3              	100.00%
Bootstrap support for J3KJY8 as seed ortholog is 100%.
Bootstrap support for Q29HV3 as seed ortholog is 100%.

Group of orthologs #2095. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 D.pseudoobscura:64

J3KL81              	100.00%		Q29LZ9              	100.00%
Bootstrap support for J3KL81 as seed ortholog is 100%.
Bootstrap support for Q29LZ9 as seed ortholog is 100%.

Group of orthologs #2096. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 D.pseudoobscura:63

J3KKD0              	100.00%		Q29NZ0              	100.00%
J3K0I1              	19.32%		
J3KKD2              	18.02%		
Bootstrap support for J3KKD0 as seed ortholog is 100%.
Bootstrap support for Q29NZ0 as seed ortholog is 100%.

Group of orthologs #2097. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 D.pseudoobscura:63

I9NPS6              	100.00%		Q28Z20              	100.00%
Bootstrap support for I9NPS6 as seed ortholog is 100%.
Bootstrap support for Q28Z20 as seed ortholog is 100%.

Group of orthologs #2098. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 D.pseudoobscura:63

J3K9X5              	100.00%		Q293A6              	100.00%
Bootstrap support for J3K9X5 as seed ortholog is 100%.
Bootstrap support for Q293A6 as seed ortholog is 100%.

Group of orthologs #2099. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:10 D.pseudoobscura:63

J3KFR1              	100.00%		Q291W2              	100.00%
Bootstrap support for J3KFR1 as seed ortholog is 59%.
Alternative seed ortholog is J3K180 (10 bits away from this cluster)
Bootstrap support for Q291W2 as seed ortholog is 100%.

Group of orthologs #2100. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 D.pseudoobscura:63

J3KHF5              	100.00%		Q29L93              	100.00%
Bootstrap support for J3KHF5 as seed ortholog is 100%.
Bootstrap support for Q29L93 as seed ortholog is 100%.

Group of orthologs #2101. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

J3KBK0              	100.00%		B5DW62              	100.00%
                    	       		B5DTQ5              	96.57%
                    	       		B5DTQ6              	80.50%
                    	       		B5DW61              	80.24%
                    	       		Q29BN0              	61.26%
                    	       		B5DYA6              	56.79%
                    	       		Q29BN1              	53.23%
Bootstrap support for J3KBK0 as seed ortholog is 100%.
Bootstrap support for B5DW62 as seed ortholog is 100%.

Group of orthologs #2102. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

J3KIW9              	100.00%		Q29KK7              	100.00%
J3K1E5              	24.80%		
J3K3B7              	23.02%		
Bootstrap support for J3KIW9 as seed ortholog is 100%.
Bootstrap support for Q29KK7 as seed ortholog is 100%.

Group of orthologs #2103. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

J3KA07              	100.00%		Q28ZT9              	100.00%
                    	       		B5DL18              	9.12%
Bootstrap support for J3KA07 as seed ortholog is 100%.
Bootstrap support for Q28ZT9 as seed ortholog is 100%.

Group of orthologs #2104. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

I9XLA3              	100.00%		Q291C9              	100.00%
Bootstrap support for I9XLA3 as seed ortholog is 100%.
Bootstrap support for Q291C9 as seed ortholog is 100%.

Group of orthologs #2105. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

J3KHK6              	100.00%		B5DQS3              	100.00%
Bootstrap support for J3KHK6 as seed ortholog is 100%.
Bootstrap support for B5DQS3 as seed ortholog is 100%.

Group of orthologs #2106. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

J3KI89              	100.00%		Q29D12              	100.00%
Bootstrap support for J3KI89 as seed ortholog is 100%.
Bootstrap support for Q29D12 as seed ortholog is 100%.

Group of orthologs #2107. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

J3KHN8              	100.00%		Q29HM0              	100.00%
Bootstrap support for J3KHN8 as seed ortholog is 100%.
Bootstrap support for Q29HM0 as seed ortholog is 100%.

Group of orthologs #2108. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:9

J3KG64              	100.00%		Q29JG8              	100.00%
Bootstrap support for J3KG64 as seed ortholog is 100%.
Bootstrap support for Q29JG8 as seed ortholog is 62%.
Alternative seed ortholog is Q291V4 (9 bits away from this cluster)

Group of orthologs #2109. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 D.pseudoobscura:62

Q1E3S4              	100.00%		Q2M0K3              	100.00%
Bootstrap support for Q1E3S4 as seed ortholog is 100%.
Bootstrap support for Q2M0K3 as seed ortholog is 100%.

Group of orthologs #2110. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:15

J3KK32              	100.00%		Q29KW3              	100.00%
J3KJY0              	5.94%		
Bootstrap support for J3KK32 as seed ortholog is 100%.
Bootstrap support for Q29KW3 as seed ortholog is 74%.
Alternative seed ortholog is B5DIH0 (15 bits away from this cluster)

Group of orthologs #2111. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:61

J3K3H0              	100.00%		Q29C85              	100.00%
Bootstrap support for J3K3H0 as seed ortholog is 100%.
Bootstrap support for Q29C85 as seed ortholog is 100%.

Group of orthologs #2112. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:61

J3KHB5              	100.00%		Q29AB5              	100.00%
Bootstrap support for J3KHB5 as seed ortholog is 100%.
Bootstrap support for Q29AB5 as seed ortholog is 100%.

Group of orthologs #2113. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:61

J3K4X1              	100.00%		Q29NV1              	100.00%
Bootstrap support for J3K4X1 as seed ortholog is 100%.
Bootstrap support for Q29NV1 as seed ortholog is 100%.

Group of orthologs #2114. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:61

J3KK02              	100.00%		Q29EG4              	100.00%
Bootstrap support for J3KK02 as seed ortholog is 100%.
Bootstrap support for Q29EG4 as seed ortholog is 100%.

Group of orthologs #2115. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 D.pseudoobscura:61

J3KG51              	100.00%		Q29II4              	100.00%
Bootstrap support for J3KG51 as seed ortholog is 100%.
Bootstrap support for Q29II4 as seed ortholog is 100%.

Group of orthologs #2116. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:60

J3KC60              	100.00%		I7LSV0              	100.00%
Bootstrap support for J3KC60 as seed ortholog is 100%.
Bootstrap support for I7LSV0 as seed ortholog is 100%.

Group of orthologs #2117. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:60

Q1E3Z7              	100.00%		Q299H4              	100.00%
Bootstrap support for Q1E3Z7 as seed ortholog is 100%.
Bootstrap support for Q299H4 as seed ortholog is 100%.

Group of orthologs #2118. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 D.pseudoobscura:60

Q1DR50              	100.00%		Q29PN7              	100.00%
Bootstrap support for Q1DR50 as seed ortholog is 100%.
Bootstrap support for Q29PN7 as seed ortholog is 100%.

Group of orthologs #2119. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KFL6              	100.00%		Q29AU6              	100.00%
                    	       		B5DVZ2              	38.76%
                    	       		B5DSB7              	7.20%
Bootstrap support for J3KFL6 as seed ortholog is 100%.
Bootstrap support for Q29AU6 as seed ortholog is 100%.

Group of orthologs #2120. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3K955              	100.00%		B5DHB3              	100.00%
Bootstrap support for J3K955 as seed ortholog is 100%.
Bootstrap support for B5DHB3 as seed ortholog is 100%.

Group of orthologs #2121. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3K3G9              	100.00%		I7M5V6              	100.00%
Bootstrap support for J3K3G9 as seed ortholog is 100%.
Bootstrap support for I7M5V6 as seed ortholog is 100%.

Group of orthologs #2122. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J0HGL8              	100.00%		Q29DH3              	100.00%
Bootstrap support for J0HGL8 as seed ortholog is 100%.
Bootstrap support for Q29DH3 as seed ortholog is 100%.

Group of orthologs #2123. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3K324              	100.00%		Q29EZ9              	100.00%
Bootstrap support for J3K324 as seed ortholog is 100%.
Bootstrap support for Q29EZ9 as seed ortholog is 100%.

Group of orthologs #2124. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3K904              	100.00%		Q298I2              	100.00%
Bootstrap support for J3K904 as seed ortholog is 100%.
Bootstrap support for Q298I2 as seed ortholog is 100%.

Group of orthologs #2125. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KDP8              	100.00%		Q296W2              	100.00%
Bootstrap support for J3KDP8 as seed ortholog is 100%.
Bootstrap support for Q296W2 as seed ortholog is 100%.

Group of orthologs #2126. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KCX8              	100.00%		Q29AF4              	100.00%
Bootstrap support for J3KCX8 as seed ortholog is 100%.
Bootstrap support for Q29AF4 as seed ortholog is 100%.

Group of orthologs #2127. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3K0A4              	100.00%		Q2LZ05              	100.00%
Bootstrap support for J3K0A4 as seed ortholog is 100%.
Bootstrap support for Q2LZ05 as seed ortholog is 100%.

Group of orthologs #2128. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KHQ8              	100.00%		Q297H9              	100.00%
Bootstrap support for J3KHQ8 as seed ortholog is 100%.
Bootstrap support for Q297H9 as seed ortholog is 100%.

Group of orthologs #2129. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3K4H5              	100.00%		Q29MZ6              	100.00%
Bootstrap support for J3K4H5 as seed ortholog is 100%.
Bootstrap support for Q29MZ6 as seed ortholog is 100%.

Group of orthologs #2130. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KLC5              	100.00%		Q29F88              	100.00%
Bootstrap support for J3KLC5 as seed ortholog is 100%.
Bootstrap support for Q29F88 as seed ortholog is 100%.

Group of orthologs #2131. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KJR2              	100.00%		Q2LYX3              	100.00%
Bootstrap support for J3KJR2 as seed ortholog is 100%.
Bootstrap support for Q2LYX3 as seed ortholog is 100%.

Group of orthologs #2132. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 D.pseudoobscura:59

J3KKF1              	100.00%		Q2M1A8              	100.00%
Bootstrap support for J3KKF1 as seed ortholog is 100%.
Bootstrap support for Q2M1A8 as seed ortholog is 100%.

Group of orthologs #2133. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:58

J3K891              	100.00%		Q29BW7              	100.00%
Bootstrap support for J3K891 as seed ortholog is 100%.
Bootstrap support for Q29BW7 as seed ortholog is 100%.

Group of orthologs #2134. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:58

J3KKP1              	100.00%		Q28Z42              	100.00%
Bootstrap support for J3KKP1 as seed ortholog is 100%.
Bootstrap support for Q28Z42 as seed ortholog is 100%.

Group of orthologs #2135. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:58

J3K323              	100.00%		Q29ND3              	100.00%
Bootstrap support for J3K323 as seed ortholog is 100%.
Bootstrap support for Q29ND3 as seed ortholog is 100%.

Group of orthologs #2136. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 D.pseudoobscura:58

J3KK29              	100.00%		Q298L2              	100.00%
Bootstrap support for J3KK29 as seed ortholog is 100%.
Bootstrap support for Q298L2 as seed ortholog is 100%.

Group of orthologs #2137. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:57

J3K8J6              	100.00%		B5DII8              	100.00%
                    	       		Q29H23              	100.00%
                    	       		B5DII9              	5.79%
Bootstrap support for J3K8J6 as seed ortholog is 100%.
Bootstrap support for B5DII8 as seed ortholog is 100%.
Bootstrap support for Q29H23 as seed ortholog is 100%.

Group of orthologs #2138. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:57

J3KGF9              	100.00%		B5DLB1              	100.00%
                    	       		B5DIU5              	67.41%
Bootstrap support for J3KGF9 as seed ortholog is 100%.
Bootstrap support for B5DLB1 as seed ortholog is 100%.

Group of orthologs #2139. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:11

J3K1D9              	100.00%		Q299D1              	100.00%
Bootstrap support for J3K1D9 as seed ortholog is 100%.
Bootstrap support for Q299D1 as seed ortholog is 66%.
Alternative seed ortholog is Q28ZW9 (11 bits away from this cluster)

Group of orthologs #2140. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:57

J3K9P4              	100.00%		Q28XH8              	100.00%
Bootstrap support for J3K9P4 as seed ortholog is 100%.
Bootstrap support for Q28XH8 as seed ortholog is 100%.

Group of orthologs #2141. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:57

J3K8C7              	100.00%		Q29CI5              	100.00%
Bootstrap support for J3K8C7 as seed ortholog is 100%.
Bootstrap support for Q29CI5 as seed ortholog is 100%.

Group of orthologs #2142. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:57

J3K055              	100.00%		Q29LK3              	100.00%
Bootstrap support for J3K055 as seed ortholog is 100%.
Bootstrap support for Q29LK3 as seed ortholog is 100%.

Group of orthologs #2143. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 D.pseudoobscura:57

J3K3L8              	100.00%		Q2M098              	100.00%
Bootstrap support for J3K3L8 as seed ortholog is 100%.
Bootstrap support for Q2M098 as seed ortholog is 100%.

Group of orthologs #2144. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 D.pseudoobscura:56

J3K6H9              	100.00%		Q28Z88              	100.00%
                    	       		Q28Z89              	36.92%
                    	       		B5DRZ9              	25.53%
                    	       		Q298G4              	21.53%
                    	       		Q2M0M9              	15.02%
                    	       		Q28ZR5              	5.26%
Bootstrap support for J3K6H9 as seed ortholog is 100%.
Bootstrap support for Q28Z88 as seed ortholog is 100%.

Group of orthologs #2145. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 D.pseudoobscura:56

J3KAN4              	100.00%		B5E0W2              	100.00%
Bootstrap support for J3KAN4 as seed ortholog is 100%.
Bootstrap support for B5E0W2 as seed ortholog is 100%.

Group of orthologs #2146. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 D.pseudoobscura:56

I9NN82              	100.00%		Q2LZN4              	100.00%
Bootstrap support for I9NN82 as seed ortholog is 100%.
Bootstrap support for Q2LZN4 as seed ortholog is 100%.

Group of orthologs #2147. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 D.pseudoobscura:56

J3K5Y0              	100.00%		Q29IC2              	100.00%
Bootstrap support for J3K5Y0 as seed ortholog is 100%.
Bootstrap support for Q29IC2 as seed ortholog is 100%.

Group of orthologs #2148. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 D.pseudoobscura:12

J3K7J2              	100.00%		Q295J4              	100.00%
Bootstrap support for J3K7J2 as seed ortholog is 100%.
Bootstrap support for Q295J4 as seed ortholog is 65%.
Alternative seed ortholog is B5DU41 (12 bits away from this cluster)

Group of orthologs #2149. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:13 D.pseudoobscura:55

J3KHS3              	100.00%		Q29AR6              	100.00%
Bootstrap support for J3KHS3 as seed ortholog is 68%.
Alternative seed ortholog is J3KC97 (13 bits away from this cluster)
Bootstrap support for Q29AR6 as seed ortholog is 100%.

Group of orthologs #2150. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K2S0              	100.00%		B5DLG6              	100.00%
                    	       		B5DVD7              	25.63%
                    	       		B5DRH7              	17.77%
Bootstrap support for J3K2S0 as seed ortholog is 100%.
Bootstrap support for B5DLG6 as seed ortholog is 100%.

Group of orthologs #2151. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J0HEZ0              	100.00%		B5DNP9              	100.00%
                    	       		Q28ZZ9              	31.76%
Bootstrap support for J0HEZ0 as seed ortholog is 100%.
Bootstrap support for B5DNP9 as seed ortholog is 100%.

Group of orthologs #2152. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K1S7              	100.00%		Q292I1              	100.00%
                    	       		Q29FX9              	24.33%
Bootstrap support for J3K1S7 as seed ortholog is 100%.
Bootstrap support for Q292I1 as seed ortholog is 100%.

Group of orthologs #2153. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K4A2              	100.00%		B5DVJ4              	100.00%
Bootstrap support for J3K4A2 as seed ortholog is 100%.
Bootstrap support for B5DVJ4 as seed ortholog is 100%.

Group of orthologs #2154. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K3H6              	100.00%		Q295A3              	100.00%
Bootstrap support for J3K3H6 as seed ortholog is 100%.
Bootstrap support for Q295A3 as seed ortholog is 100%.

Group of orthologs #2155. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K330              	100.00%		Q297F1              	100.00%
Bootstrap support for J3K330 as seed ortholog is 100%.
Bootstrap support for Q297F1 as seed ortholog is 100%.

Group of orthologs #2156. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3KAJ6              	100.00%		Q294V7              	100.00%
Bootstrap support for J3KAJ6 as seed ortholog is 100%.
Bootstrap support for Q294V7 as seed ortholog is 100%.

Group of orthologs #2157. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3KAW9              	100.00%		Q29DC8              	100.00%
Bootstrap support for J3KAW9 as seed ortholog is 100%.
Bootstrap support for Q29DC8 as seed ortholog is 100%.

Group of orthologs #2158. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K666              	100.00%		Q29JW3              	100.00%
Bootstrap support for J3K666 as seed ortholog is 100%.
Bootstrap support for Q29JW3 as seed ortholog is 100%.

Group of orthologs #2159. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3K8D0              	100.00%		Q29K76              	100.00%
Bootstrap support for J3K8D0 as seed ortholog is 100%.
Bootstrap support for Q29K76 as seed ortholog is 100%.

Group of orthologs #2160. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 D.pseudoobscura:54

J3KGI3              	100.00%		Q29LY7              	100.00%
Bootstrap support for J3KGI3 as seed ortholog is 100%.
Bootstrap support for Q29LY7 as seed ortholog is 100%.

Group of orthologs #2161. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:53

J3KLT3              	100.00%		B5DW69              	100.00%
                    	       		B5DWC9              	21.81%
                    	       		Q29JQ6              	14.92%
                    	       		Q28X34              	7.12%
                    	       		Q294E3              	6.21%
Bootstrap support for J3KLT3 as seed ortholog is 100%.
Bootstrap support for B5DW69 as seed ortholog is 100%.

Group of orthologs #2162. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:53

J3K802              	100.00%		I7KLG7              	100.00%
                    	       		I7M6Y7              	39.29%
Bootstrap support for J3K802 as seed ortholog is 100%.
Bootstrap support for I7KLG7 as seed ortholog is 100%.

Group of orthologs #2163. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:53

J3K3W4              	100.00%		Q29ID3              	100.00%
Bootstrap support for J3K3W4 as seed ortholog is 100%.
Bootstrap support for Q29ID3 as seed ortholog is 100%.

Group of orthologs #2164. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:53

J3K8A1              	100.00%		Q29K25              	100.00%
Bootstrap support for J3K8A1 as seed ortholog is 100%.
Bootstrap support for Q29K25 as seed ortholog is 100%.

Group of orthologs #2165. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 D.pseudoobscura:53

J3KJT3              	100.00%		Q29II2              	100.00%
Bootstrap support for J3KJT3 as seed ortholog is 100%.
Bootstrap support for Q29II2 as seed ortholog is 100%.

Group of orthologs #2166. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

J3K9A1              	100.00%		Q2LZK5              	100.00%
                    	       		B5DPU4              	37.90%
                    	       		Q2LZA4              	30.86%
Bootstrap support for J3K9A1 as seed ortholog is 100%.
Bootstrap support for Q2LZK5 as seed ortholog is 100%.

Group of orthologs #2167. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

J3K085              	100.00%		B5DTE3              	100.00%
Bootstrap support for J3K085 as seed ortholog is 100%.
Bootstrap support for B5DTE3 as seed ortholog is 100%.

Group of orthologs #2168. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

J3K9R6              	100.00%		Q28Y74              	100.00%
Bootstrap support for J3K9R6 as seed ortholog is 100%.
Bootstrap support for Q28Y74 as seed ortholog is 100%.

Group of orthologs #2169. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

J3KIM7              	100.00%		Q28YX4              	100.00%
Bootstrap support for J3KIM7 as seed ortholog is 100%.
Bootstrap support for Q28YX4 as seed ortholog is 100%.

Group of orthologs #2170. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

J3KGZ6              	100.00%		Q29GZ6              	100.00%
Bootstrap support for J3KGZ6 as seed ortholog is 100%.
Bootstrap support for Q29GZ6 as seed ortholog is 100%.

Group of orthologs #2171. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

Q1E0Q7              	100.00%		Q29EM4              	100.00%
Bootstrap support for Q1E0Q7 as seed ortholog is 100%.
Bootstrap support for Q29EM4 as seed ortholog is 100%.

Group of orthologs #2172. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 D.pseudoobscura:52

J3KFG5              	100.00%		Q2LZY4              	100.00%
Bootstrap support for J3KFG5 as seed ortholog is 100%.
Bootstrap support for Q2LZY4 as seed ortholog is 100%.

Group of orthologs #2173. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:51

J3KH99              	100.00%		Q29IM2              	100.00%
J3K778              	35.00%		
J3KAX6              	31.20%		
J3K8U0              	26.80%		
J3K335              	24.80%		
J3KID4              	24.20%		
J3KDH3              	23.90%		
J3K0X3              	23.50%		
J3K9B7              	22.00%		
J3KAX3              	21.90%		
J3K1R5              	18.50%		
J3KGV1              	11.90%		
J3KAE9              	11.20%		
J3KKU8              	10.40%		
J0HEF5              	8.80%		
J3K3V3              	7.90%		
J3K9U1              	7.70%		
J3K1P9              	7.20%		
J3KM73              	6.60%		
J3KJK5              	5.50%		
J3KAF0              	5.10%		
Bootstrap support for J3KH99 as seed ortholog is 100%.
Bootstrap support for Q29IM2 as seed ortholog is 100%.

Group of orthologs #2174. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:51

J3K5E4              	100.00%		Q29KG1              	100.00%
                    	       		B5DH97              	12.96%
                    	       		B5DNR8              	9.72%
Bootstrap support for J3K5E4 as seed ortholog is 100%.
Bootstrap support for Q29KG1 as seed ortholog is 100%.

Group of orthologs #2175. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:51

J3K1J9              	100.00%		Q298S6              	100.00%
                    	       		I5ANV3              	18.40%
Bootstrap support for J3K1J9 as seed ortholog is 100%.
Bootstrap support for Q298S6 as seed ortholog is 100%.

Group of orthologs #2176. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:51

I9XKT0              	100.00%		Q29BZ0              	100.00%
Bootstrap support for I9XKT0 as seed ortholog is 100%.
Bootstrap support for Q29BZ0 as seed ortholog is 100%.

Group of orthologs #2177. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:51

J3KDJ2              	100.00%		Q28YY4              	100.00%
Bootstrap support for J3KDJ2 as seed ortholog is 100%.
Bootstrap support for Q28YY4 as seed ortholog is 100%.

Group of orthologs #2178. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 D.pseudoobscura:51

J3KHA3              	100.00%		Q29KF8              	100.00%
Bootstrap support for J3KHA3 as seed ortholog is 100%.
Bootstrap support for Q29KF8 as seed ortholog is 100%.

Group of orthologs #2179. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:3 D.pseudoobscura:1

J3KG43              	100.00%		B5E0B0              	100.00%
I9NKG4              	9.80%		Q29K37              	34.16%
J3K061              	9.27%		B5DZR9              	12.27%
                    	       		B5DRC6              	10.95%
                    	       		B5DS48              	8.79%
Bootstrap support for J3KG43 as seed ortholog is 53%.
Alternative seed ortholog is J0HGN1 (3 bits away from this cluster)
Bootstrap support for B5E0B0 as seed ortholog is 45%.
Alternative seed ortholog is Q29IZ5 (1 bits away from this cluster)

Group of orthologs #2180. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:50

J3KKF5              	100.00%		B5DL77              	100.00%
Bootstrap support for J3KKF5 as seed ortholog is 100%.
Bootstrap support for B5DL77 as seed ortholog is 100%.

Group of orthologs #2181. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:50

J3KEM1              	100.00%		B5DVV5              	100.00%
Bootstrap support for J3KEM1 as seed ortholog is 100%.
Bootstrap support for B5DVV5 as seed ortholog is 100%.

Group of orthologs #2182. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:50

J3K220              	100.00%		Q29ED6              	100.00%
Bootstrap support for J3K220 as seed ortholog is 100%.
Bootstrap support for Q29ED6 as seed ortholog is 100%.

Group of orthologs #2183. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:50

J3KMD7              	100.00%		B5DZD0              	100.00%
Bootstrap support for J3KMD7 as seed ortholog is 100%.
Bootstrap support for B5DZD0 as seed ortholog is 100%.

Group of orthologs #2184. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:50

J3KKB9              	100.00%		Q29D03              	100.00%
Bootstrap support for J3KKB9 as seed ortholog is 100%.
Bootstrap support for Q29D03 as seed ortholog is 100%.

Group of orthologs #2185. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 D.pseudoobscura:50

J3KDM5              	100.00%		Q2LZ91              	100.00%
Bootstrap support for J3KDM5 as seed ortholog is 100%.
Bootstrap support for Q2LZ91 as seed ortholog is 100%.

Group of orthologs #2186. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 D.pseudoobscura:49

J3K5W5              	100.00%		Q29EH5              	100.00%
J3K192              	5.31%		
Bootstrap support for J3K5W5 as seed ortholog is 100%.
Bootstrap support for Q29EH5 as seed ortholog is 100%.

Group of orthologs #2187. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 D.pseudoobscura:49

J3KBG9              	100.00%		Q295S8              	100.00%
Bootstrap support for J3KBG9 as seed ortholog is 100%.
Bootstrap support for Q295S8 as seed ortholog is 100%.

Group of orthologs #2188. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 D.pseudoobscura:48

J3K2N6              	100.00%		Q29NY0              	100.00%
                    	       		Q29K50              	27.99%
                    	       		Q29NX9              	24.49%
                    	       		Q29K54              	13.81%
                    	       		B5DR79              	11.97%
                    	       		B5DQU3              	10.50%
                    	       		Q2LZB5              	8.47%
                    	       		Q296E7              	8.29%
                    	       		B5DPD3              	8.10%
                    	       		Q28Y08              	7.55%
                    	       		Q29JW0              	7.55%
                    	       		Q28Y06              	7.18%
                    	       		Q28Y09              	7.00%
Bootstrap support for J3K2N6 as seed ortholog is 100%.
Bootstrap support for Q29NY0 as seed ortholog is 100%.

Group of orthologs #2189. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 D.pseudoobscura:48

J3K126              	100.00%		Q29NW8              	100.00%
                    	       		Q2LZ55              	100.00%
                    	       		Q29NW7              	44.16%
Bootstrap support for J3K126 as seed ortholog is 100%.
Bootstrap support for Q29NW8 as seed ortholog is 100%.
Bootstrap support for Q2LZ55 as seed ortholog is 100%.

Group of orthologs #2190. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3K5P8              	100.00%		Q297J2              	100.00%
                    	       		Q29D72              	14.79%
                    	       		Q2LYL0              	9.86%
                    	       		Q29D57              	7.75%
Bootstrap support for J3K5P8 as seed ortholog is 100%.
Bootstrap support for Q297J2 as seed ortholog is 100%.

Group of orthologs #2191. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3K262              	100.00%		Q29NK4              	100.00%
                    	       		Q29CU9              	16.84%
                    	       		B5DPC7              	8.58%
Bootstrap support for J3K262 as seed ortholog is 100%.
Bootstrap support for Q29NK4 as seed ortholog is 100%.

Group of orthologs #2192. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3K590              	100.00%		Q293A1              	100.00%
Bootstrap support for J3K590 as seed ortholog is 100%.
Bootstrap support for Q293A1 as seed ortholog is 100%.

Group of orthologs #2193. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3K4C3              	100.00%		Q29DI1              	100.00%
Bootstrap support for J3K4C3 as seed ortholog is 100%.
Bootstrap support for Q29DI1 as seed ortholog is 100%.

Group of orthologs #2194. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3K4L2              	100.00%		Q29II9              	100.00%
Bootstrap support for J3K4L2 as seed ortholog is 100%.
Bootstrap support for Q29II9 as seed ortholog is 100%.

Group of orthologs #2195. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3KE54              	100.00%		Q29A49              	100.00%
Bootstrap support for J3KE54 as seed ortholog is 100%.
Bootstrap support for Q29A49 as seed ortholog is 100%.

Group of orthologs #2196. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3K4S7              	100.00%		Q29NX0              	100.00%
Bootstrap support for J3K4S7 as seed ortholog is 100%.
Bootstrap support for Q29NX0 as seed ortholog is 100%.

Group of orthologs #2197. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3KCD8              	100.00%		Q29KY0              	100.00%
Bootstrap support for J3KCD8 as seed ortholog is 100%.
Bootstrap support for Q29KY0 as seed ortholog is 100%.

Group of orthologs #2198. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 D.pseudoobscura:47

J3KG68              	100.00%		Q2M161              	100.00%
Bootstrap support for J3KG68 as seed ortholog is 100%.
Bootstrap support for Q2M161 as seed ortholog is 100%.

Group of orthologs #2199. Best score 46 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:46

J3KAP4              	100.00%		B5DXB8              	100.00%
                    	       		Q29DG9              	20.02%
                    	       		B5DRK7              	19.91%
                    	       		Q29DG8              	19.68%
                    	       		Q29AQ4              	16.93%
Bootstrap support for J3KAP4 as seed ortholog is 100%.
Bootstrap support for B5DXB8 as seed ortholog is 100%.

Group of orthologs #2200. Best score 46 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:46

J0HH78              	100.00%		Q292Z3              	100.00%
J3K665              	11.32%		Q29PI3              	45.82%
Bootstrap support for J0HH78 as seed ortholog is 100%.
Bootstrap support for Q292Z3 as seed ortholog is 100%.

Group of orthologs #2201. Best score 46 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:46

J3K752              	100.00%		Q2LZI3              	100.00%
Bootstrap support for J3K752 as seed ortholog is 100%.
Bootstrap support for Q2LZI3 as seed ortholog is 100%.

Group of orthologs #2202. Best score 46 bits
Score difference with first non-orthologous sequence - C.immitis:46 D.pseudoobscura:46

J3KHJ8              	100.00%		Q29NM1              	100.00%
Bootstrap support for J3KHJ8 as seed ortholog is 100%.
Bootstrap support for Q29NM1 as seed ortholog is 100%.

Group of orthologs #2203. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:45

J3KMB1              	100.00%		Q29M81              	100.00%
                    	       		Q2LYP3              	27.10%
                    	       		Q2LYP4              	26.31%
                    	       		B5DQD9              	20.76%
                    	       		B5DQD8              	20.13%
                    	       		Q2LYU3              	19.02%
Bootstrap support for J3KMB1 as seed ortholog is 100%.
Bootstrap support for Q29M81 as seed ortholog is 100%.

Group of orthologs #2204. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:45

J3K7I8              	100.00%		B5DRK9              	100.00%
                    	       		B5DN13              	45.54%
                    	       		Q28ZZ0              	8.91%
Bootstrap support for J3K7I8 as seed ortholog is 100%.
Bootstrap support for B5DRK9 as seed ortholog is 100%.

Group of orthologs #2205. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:45

J3K914              	100.00%		Q29JM0              	100.00%
                    	       		B5DLH1              	6.78%
Bootstrap support for J3K914 as seed ortholog is 100%.
Bootstrap support for Q29JM0 as seed ortholog is 100%.

Group of orthologs #2206. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 D.pseudoobscura:45

J3K960              	100.00%		Q296J6              	100.00%
Bootstrap support for J3K960 as seed ortholog is 100%.
Bootstrap support for Q296J6 as seed ortholog is 100%.

Group of orthologs #2207. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3K0W5              	100.00%		B5DXH4              	100.00%
                    	       		B5DV79              	17.51%
                    	       		B5DUQ9              	14.48%
                    	       		B5DWB8              	14.14%
                    	       		B5DKV5              	13.47%
                    	       		B5DIA8              	11.11%
Bootstrap support for J3K0W5 as seed ortholog is 100%.
Bootstrap support for B5DXH4 as seed ortholog is 100%.

Group of orthologs #2208. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3KIH4              	100.00%		Q29M10              	100.00%
                    	       		Q28YV7              	14.62%
                    	       		B5DYC8              	14.62%
                    	       		B5DJM7              	11.70%
                    	       		B5DJA7              	8.77%
Bootstrap support for J3KIH4 as seed ortholog is 100%.
Bootstrap support for Q29M10 as seed ortholog is 100%.

Group of orthologs #2209. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3KD64              	100.00%		Q28XU3              	100.00%
                    	       		Q291G6              	32.25%
                    	       		Q28XU1              	22.98%
                    	       		Q28ZM1              	20.76%
Bootstrap support for J3KD64 as seed ortholog is 100%.
Bootstrap support for Q28XU3 as seed ortholog is 100%.

Group of orthologs #2210. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3K7A2              	100.00%		Q28Y94              	100.00%
Bootstrap support for J3K7A2 as seed ortholog is 100%.
Bootstrap support for Q28Y94 as seed ortholog is 100%.

Group of orthologs #2211. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3KBL6              	100.00%		Q2M0M3              	100.00%
Bootstrap support for J3KBL6 as seed ortholog is 100%.
Bootstrap support for Q2M0M3 as seed ortholog is 100%.

Group of orthologs #2212. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3KCT2              	100.00%		Q2M104              	100.00%
Bootstrap support for J3KCT2 as seed ortholog is 100%.
Bootstrap support for Q2M104 as seed ortholog is 100%.

Group of orthologs #2213. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 D.pseudoobscura:44

J3KLK2              	100.00%		Q2LYI4              	100.00%
Bootstrap support for J3KLK2 as seed ortholog is 100%.
Bootstrap support for Q2LYI4 as seed ortholog is 100%.

Group of orthologs #2214. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 D.pseudoobscura:43

I9NMB0              	100.00%		Q29PD7              	100.00%
J3K7D7              	18.97%		
J3KEL5              	8.50%		
J3K7P3              	6.53%		
Bootstrap support for I9NMB0 as seed ortholog is 100%.
Bootstrap support for Q29PD7 as seed ortholog is 100%.

Group of orthologs #2215. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 D.pseudoobscura:43

J3KEI1              	100.00%		Q2LZW1              	100.00%
                    	       		Q29KQ5              	17.22%
Bootstrap support for J3KEI1 as seed ortholog is 100%.
Bootstrap support for Q2LZW1 as seed ortholog is 100%.

Group of orthologs #2216. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 D.pseudoobscura:43

Q1DJH5              	100.00%		Q29DA6              	100.00%
Bootstrap support for Q1DJH5 as seed ortholog is 100%.
Bootstrap support for Q29DA6 as seed ortholog is 100%.

Group of orthologs #2217. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 D.pseudoobscura:42

J3KIL8              	100.00%		Q29CB8              	100.00%
J3KH89              	13.95%		
I9NQI1              	9.53%		
Bootstrap support for J3KIL8 as seed ortholog is 100%.
Bootstrap support for Q29CB8 as seed ortholog is 100%.

Group of orthologs #2218. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 D.pseudoobscura:42

J3KK74              	100.00%		Q29HR1              	100.00%
Bootstrap support for J3KK74 as seed ortholog is 100%.
Bootstrap support for Q29HR1 as seed ortholog is 100%.

Group of orthologs #2219. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 D.pseudoobscura:42

J3KIQ7              	100.00%		Q2M1A3              	100.00%
Bootstrap support for J3KIQ7 as seed ortholog is 100%.
Bootstrap support for Q2M1A3 as seed ortholog is 100%.

Group of orthologs #2220. Best score 41 bits
Score difference with first non-orthologous sequence - C.immitis:41 D.pseudoobscura:41

J3K7M4              	100.00%		I5AMQ1              	100.00%
Bootstrap support for J3K7M4 as seed ortholog is 100%.
Bootstrap support for I5AMQ1 as seed ortholog is 100%.

Group of orthologs #2221. Best score 40 bits
Score difference with first non-orthologous sequence - C.immitis:40 D.pseudoobscura:40

J3KHD9              	100.00%		Q29KY4              	100.00%
Bootstrap support for J3KHD9 as seed ortholog is 100%.
Bootstrap support for Q29KY4 as seed ortholog is 100%.