###################################
277 groups of orthologs
345 in-paralogs from A.gossypii
310 in-paralogs from T.yellowstonii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 776 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.yellowstonii:157

Q758I5              	100.00%		B5YI87              	100.00%
Bootstrap support for Q758I5 as seed ortholog is 96%.
Bootstrap support for B5YI87 as seed ortholog is 99%.

Group of orthologs #2. Best score 753 bits
Score difference with first non-orthologous sequence - A.gossypii:753 T.yellowstonii:753

Q752K1              	100.00%		B5YJQ7              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for B5YJQ7 as seed ortholog is 100%.

Group of orthologs #3. Best score 735 bits
Score difference with first non-orthologous sequence - A.gossypii:735 T.yellowstonii:735

Q75D66              	100.00%		B5YLE4              	100.00%
Bootstrap support for Q75D66 as seed ortholog is 100%.
Bootstrap support for B5YLE4 as seed ortholog is 100%.

Group of orthologs #4. Best score 729 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.yellowstonii:675

Q753R1              	100.00%		B5YH59              	100.00%
Bootstrap support for Q753R1 as seed ortholog is 99%.
Bootstrap support for B5YH59 as seed ortholog is 100%.

Group of orthologs #5. Best score 665 bits
Score difference with first non-orthologous sequence - A.gossypii:445 T.yellowstonii:665

Q75EP5              	100.00%		B5YKF7              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for B5YKF7 as seed ortholog is 100%.

Group of orthologs #6. Best score 630 bits
Score difference with first non-orthologous sequence - A.gossypii:517 T.yellowstonii:460

Q75D54              	100.00%		B5YI24              	100.00%
Bootstrap support for Q75D54 as seed ortholog is 100%.
Bootstrap support for B5YI24 as seed ortholog is 100%.

Group of orthologs #7. Best score 618 bits
Score difference with first non-orthologous sequence - A.gossypii:511 T.yellowstonii:473

Q751H8              	100.00%		B5YI22              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for B5YI22 as seed ortholog is 100%.

Group of orthologs #8. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:598 T.yellowstonii:598

Q75D10              	100.00%		B5YJD3              	100.00%
Bootstrap support for Q75D10 as seed ortholog is 100%.
Bootstrap support for B5YJD3 as seed ortholog is 100%.

Group of orthologs #9. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:481 T.yellowstonii:400

Q750T7              	100.00%		B5YGV3              	100.00%
Q758X0              	21.05%		
Bootstrap support for Q750T7 as seed ortholog is 100%.
Bootstrap support for B5YGV3 as seed ortholog is 100%.

Group of orthologs #10. Best score 591 bits
Score difference with first non-orthologous sequence - A.gossypii:591 T.yellowstonii:591

Q756B7              	100.00%		B5YHY9              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for B5YHY9 as seed ortholog is 100%.

Group of orthologs #11. Best score 565 bits
Score difference with first non-orthologous sequence - A.gossypii:478 T.yellowstonii:565

Q754B5              	100.00%		B5YJN3              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for B5YJN3 as seed ortholog is 100%.

Group of orthologs #12. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 T.yellowstonii:555

Q759B4              	100.00%		B5YJG4              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for B5YJG4 as seed ortholog is 100%.

Group of orthologs #13. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:386 T.yellowstonii:537

Q74ZG2              	100.00%		B5YHC9              	100.00%
Bootstrap support for Q74ZG2 as seed ortholog is 100%.
Bootstrap support for B5YHC9 as seed ortholog is 100%.

Group of orthologs #14. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.yellowstonii:50

Q758Q4              	100.00%		B5YJK0              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 92%.
Bootstrap support for B5YJK0 as seed ortholog is 77%.

Group of orthologs #15. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 T.yellowstonii:535

Q757H0              	100.00%		B5YLA8              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for B5YLA8 as seed ortholog is 100%.

Group of orthologs #16. Best score 528 bits
Score difference with first non-orthologous sequence - A.gossypii:350 T.yellowstonii:380

Q75ED8              	100.00%		B5YFW5              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for B5YFW5 as seed ortholog is 100%.

Group of orthologs #17. Best score 525 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.yellowstonii:94

Q754Q9              	100.00%		B5YKD3              	100.00%
Bootstrap support for Q754Q9 as seed ortholog is 99%.
Bootstrap support for B5YKD3 as seed ortholog is 99%.

Group of orthologs #18. Best score 525 bits
Score difference with first non-orthologous sequence - A.gossypii:410 T.yellowstonii:280

Q75C64              	100.00%		B5YK47              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for B5YK47 as seed ortholog is 100%.

Group of orthologs #19. Best score 514 bits
Score difference with first non-orthologous sequence - A.gossypii:398 T.yellowstonii:514

Q758Q8              	100.00%		B5YFP1              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for B5YFP1 as seed ortholog is 100%.

Group of orthologs #20. Best score 481 bits
Score difference with first non-orthologous sequence - A.gossypii:481 T.yellowstonii:481

Q753S1              	100.00%		B5YJL3              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for B5YJL3 as seed ortholog is 100%.

Group of orthologs #21. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.yellowstonii:472

Q751F3              	100.00%		B5YJT1              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 98%.
Bootstrap support for B5YJT1 as seed ortholog is 100%.

Group of orthologs #22. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:184 T.yellowstonii:469

Q75CF8              	100.00%		B5YLD2              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 99%.
Bootstrap support for B5YLD2 as seed ortholog is 100%.

Group of orthologs #23. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:20 T.yellowstonii:444

Q75EQ4              	100.00%		B5YJQ4              	100.00%
Q75DQ8              	26.57%		
Bootstrap support for Q75EQ4 as seed ortholog is 66%.
Alternative seed ortholog is Q751I0 (20 bits away from this cluster)
Bootstrap support for B5YJQ4 as seed ortholog is 100%.

Group of orthologs #24. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 T.yellowstonii:435

Q756S6              	100.00%		B5YJE1              	100.00%
Q75CP0              	47.85%		
Bootstrap support for Q756S6 as seed ortholog is 100%.
Bootstrap support for B5YJE1 as seed ortholog is 100%.

Group of orthologs #25. Best score 429 bits
Score difference with first non-orthologous sequence - A.gossypii:429 T.yellowstonii:429

Q751L7              	100.00%		B5YGT4              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for B5YGT4 as seed ortholog is 100%.

Group of orthologs #26. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 T.yellowstonii:406

Q751Y3              	100.00%		B5YHE2              	100.00%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for B5YHE2 as seed ortholog is 100%.

Group of orthologs #27. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.yellowstonii:394

Q75CZ5              	100.00%		B5YJI2              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 99%.
Bootstrap support for B5YJI2 as seed ortholog is 100%.

Group of orthologs #28. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:394 T.yellowstonii:394

Q75CN6              	100.00%		B5YKD5              	100.00%
Bootstrap support for Q75CN6 as seed ortholog is 100%.
Bootstrap support for B5YKD5 as seed ortholog is 100%.

Group of orthologs #29. Best score 393 bits
Score difference with first non-orthologous sequence - A.gossypii:393 T.yellowstonii:393

Q756H2              	100.00%		B5YKR8              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for B5YKR8 as seed ortholog is 100%.

Group of orthologs #30. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 T.yellowstonii:385

Q757Q0              	100.00%		B5YI30              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for B5YI30 as seed ortholog is 100%.

Group of orthologs #31. Best score 379 bits
Score difference with first non-orthologous sequence - A.gossypii:379 T.yellowstonii:379

Q757L9              	100.00%		B5YJI1              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for B5YJI1 as seed ortholog is 100%.

Group of orthologs #32. Best score 379 bits
Score difference with first non-orthologous sequence - A.gossypii:379 T.yellowstonii:379

Q756M4              	100.00%		B5YKX5              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for B5YKX5 as seed ortholog is 100%.

Group of orthologs #33. Best score 368 bits
Score difference with first non-orthologous sequence - A.gossypii:368 T.yellowstonii:368

Q75E56              	100.00%		B5YKK9              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for B5YKK9 as seed ortholog is 100%.

Group of orthologs #34. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:361 T.yellowstonii:361

Q75DQ3              	100.00%		B5YHS5              	100.00%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for B5YHS5 as seed ortholog is 100%.

Group of orthologs #35. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 T.yellowstonii:358

Q758F0              	100.00%		B5YFZ0              	100.00%
Q75BQ6              	32.97%		
Bootstrap support for Q758F0 as seed ortholog is 100%.
Bootstrap support for B5YFZ0 as seed ortholog is 100%.

Group of orthologs #36. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.yellowstonii:358

Q750C0              	100.00%		B5YLD6              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 99%.
Bootstrap support for B5YLD6 as seed ortholog is 100%.

Group of orthologs #37. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:177 T.yellowstonii:353

Q75AE9              	100.00%		B5YL41              	100.00%
Q752E7              	34.68%		
Bootstrap support for Q75AE9 as seed ortholog is 99%.
Bootstrap support for B5YL41 as seed ortholog is 100%.

Group of orthologs #38. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:347 T.yellowstonii:347

Q75ED6              	100.00%		B5YH38              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for B5YH38 as seed ortholog is 100%.

Group of orthologs #39. Best score 343 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.yellowstonii:343

Q757P6              	100.00%		B5YHT8              	100.00%
Bootstrap support for Q757P6 as seed ortholog is 99%.
Bootstrap support for B5YHT8 as seed ortholog is 100%.

Group of orthologs #40. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:227 T.yellowstonii:221

Q75D13              	100.00%		B5YJD5              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 100%.
Bootstrap support for B5YJD5 as seed ortholog is 100%.

Group of orthologs #41. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 T.yellowstonii:327

Q75CE3              	100.00%		B5YH23              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for B5YH23 as seed ortholog is 100%.

Group of orthologs #42. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.yellowstonii:238

Q75C31              	100.00%		B5YID6              	100.00%
Bootstrap support for Q75C31 as seed ortholog is 99%.
Bootstrap support for B5YID6 as seed ortholog is 99%.

Group of orthologs #43. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 T.yellowstonii:322

Q75A34              	100.00%		B5YFV7              	100.00%
Q756K2              	10.73%		
Q759A3              	8.00%		
Bootstrap support for Q75A34 as seed ortholog is 100%.
Bootstrap support for B5YFV7 as seed ortholog is 100%.

Group of orthologs #44. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 T.yellowstonii:310

Q753T3              	100.00%		B5YHE1              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for B5YHE1 as seed ortholog is 100%.

Group of orthologs #45. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 T.yellowstonii:307

Q753V9              	100.00%		B5YLE5              	100.00%
Bootstrap support for Q753V9 as seed ortholog is 100%.
Bootstrap support for B5YLE5 as seed ortholog is 100%.

Group of orthologs #46. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 T.yellowstonii:305

Q753Q4              	100.00%		B5YFV8              	100.00%
Q75B52              	19.02%		
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for B5YFV8 as seed ortholog is 100%.

Group of orthologs #47. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 T.yellowstonii:305

Q75AJ9              	100.00%		B5YHD3              	100.00%
Bootstrap support for Q75AJ9 as seed ortholog is 100%.
Bootstrap support for B5YHD3 as seed ortholog is 100%.

Group of orthologs #48. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.yellowstonii:297

Q75F61              	100.00%		B5YJ14              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 99%.
Bootstrap support for B5YJ14 as seed ortholog is 100%.

Group of orthologs #49. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 T.yellowstonii:295

O60028              	100.00%		B5YFS4              	100.00%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for B5YFS4 as seed ortholog is 100%.

Group of orthologs #50. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.yellowstonii:294

Q74ZW3              	100.00%		B5YJP5              	100.00%
Bootstrap support for Q74ZW3 as seed ortholog is 99%.
Bootstrap support for B5YJP5 as seed ortholog is 100%.

Group of orthologs #51. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:3 T.yellowstonii:294

Q74ZT2              	100.00%		B5YJY3              	100.00%
Bootstrap support for Q74ZT2 as seed ortholog is 51%.
Alternative seed ortholog is Q759V4 (3 bits away from this cluster)
Bootstrap support for B5YJY3 as seed ortholog is 100%.

Group of orthologs #52. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 T.yellowstonii:280

Q75D84              	100.00%		B5YL59              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for B5YL59 as seed ortholog is 100%.

Group of orthologs #53. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.yellowstonii:145

Q75AW1              	100.00%		B5YJU8              	100.00%
Bootstrap support for Q75AW1 as seed ortholog is 91%.
Bootstrap support for B5YJU8 as seed ortholog is 99%.

Group of orthologs #54. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.yellowstonii:278

Q754D3              	100.00%		B5YFP4              	100.00%
Bootstrap support for Q754D3 as seed ortholog is 91%.
Bootstrap support for B5YFP4 as seed ortholog is 100%.

Group of orthologs #55. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:278 T.yellowstonii:278

Q756N3              	100.00%		B5YFN3              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for B5YFN3 as seed ortholog is 100%.

Group of orthologs #56. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.yellowstonii:277

Q758U0              	100.00%		B5YIG1              	100.00%
Bootstrap support for Q758U0 as seed ortholog is 100%.
Bootstrap support for B5YIG1 as seed ortholog is 100%.

Group of orthologs #57. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.yellowstonii:277

Q759A9              	100.00%		B5YJV6              	100.00%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for B5YJV6 as seed ortholog is 100%.

Group of orthologs #58. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.yellowstonii:276

Q75E53              	100.00%		B5YGD2              	100.00%
Bootstrap support for Q75E53 as seed ortholog is 100%.
Bootstrap support for B5YGD2 as seed ortholog is 100%.

Group of orthologs #59. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 T.yellowstonii:269

Q752D6              	100.00%		B5YID4              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for B5YID4 as seed ortholog is 100%.

Group of orthologs #60. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.yellowstonii:266

Q759C6              	100.00%		B5YK66              	100.00%
Bootstrap support for Q759C6 as seed ortholog is 100%.
Bootstrap support for B5YK66 as seed ortholog is 100%.

Group of orthologs #61. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.yellowstonii:262

Q751A4              	100.00%		B5YG56              	100.00%
Q74Z35              	39.29%		
Q759G2              	9.07%		
Bootstrap support for Q751A4 as seed ortholog is 100%.
Bootstrap support for B5YG56 as seed ortholog is 100%.

Group of orthologs #62. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 T.yellowstonii:262

Q754N5              	100.00%		B5YH08              	100.00%
Q75EJ7              	10.59%		
Bootstrap support for Q754N5 as seed ortholog is 100%.
Bootstrap support for B5YH08 as seed ortholog is 100%.

Group of orthologs #63. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 T.yellowstonii:107

Q75B56              	100.00%		B5YIQ7              	100.00%
Bootstrap support for Q75B56 as seed ortholog is 100%.
Bootstrap support for B5YIQ7 as seed ortholog is 99%.

Group of orthologs #64. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.yellowstonii:254

Q75DW1              	100.00%		B5YGU2              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 96%.
Bootstrap support for B5YGU2 as seed ortholog is 100%.

Group of orthologs #65. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.yellowstonii:253

Q75BN8              	100.00%		B5YKW0              	100.00%
Bootstrap support for Q75BN8 as seed ortholog is 100%.
Bootstrap support for B5YKW0 as seed ortholog is 100%.

Group of orthologs #66. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.yellowstonii:252

Q759Y5              	100.00%		B5YGC2              	100.00%
Bootstrap support for Q759Y5 as seed ortholog is 100%.
Bootstrap support for B5YGC2 as seed ortholog is 100%.

Group of orthologs #67. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:16 T.yellowstonii:250

Q75C94              	100.00%		B5YJ07              	100.00%
Q751Z2              	22.23%		
Bootstrap support for Q75C94 as seed ortholog is 66%.
Alternative seed ortholog is Q751N2 (16 bits away from this cluster)
Bootstrap support for B5YJ07 as seed ortholog is 100%.

Group of orthologs #68. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.yellowstonii:245

Q752R1              	100.00%		B5YKS0              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 96%.
Bootstrap support for B5YKS0 as seed ortholog is 100%.

Group of orthologs #69. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:1 T.yellowstonii:244

Q754X6              	100.00%		B5YHR4              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 50%.
Alternative seed ortholog is Q75AC3 (1 bits away from this cluster)
Bootstrap support for B5YHR4 as seed ortholog is 100%.

Group of orthologs #70. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.yellowstonii:243

Q74ZH6              	100.00%		B5YIE1              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for B5YIE1 as seed ortholog is 100%.

Group of orthologs #71. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.yellowstonii:107

Q75EN8              	100.00%		B5YI83              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 99%.
Bootstrap support for B5YI83 as seed ortholog is 99%.

Group of orthologs #72. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 T.yellowstonii:235

Q75BW6              	100.00%		B5YGJ2              	100.00%
Q75AI4              	43.32%		B5YHG0              	42.92%
Bootstrap support for Q75BW6 as seed ortholog is 100%.
Bootstrap support for B5YGJ2 as seed ortholog is 100%.

Group of orthologs #73. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 T.yellowstonii:230

Q750E0              	100.00%		B5YJW7              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for B5YJW7 as seed ortholog is 100%.

Group of orthologs #74. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 T.yellowstonii:230

Q752N9              	100.00%		B5YLE2              	100.00%
Bootstrap support for Q752N9 as seed ortholog is 100%.
Bootstrap support for B5YLE2 as seed ortholog is 100%.

Group of orthologs #75. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 T.yellowstonii:229

Q756G4              	100.00%		B5YJ65              	100.00%
Bootstrap support for Q756G4 as seed ortholog is 100%.
Bootstrap support for B5YJ65 as seed ortholog is 100%.

Group of orthologs #76. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:14 T.yellowstonii:229

Q75DX9              	100.00%		B5YKE0              	100.00%
Bootstrap support for Q75DX9 as seed ortholog is 61%.
Alternative seed ortholog is Q74ZM9 (14 bits away from this cluster)
Bootstrap support for B5YKE0 as seed ortholog is 100%.

Group of orthologs #77. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.yellowstonii:223

Q75EY9              	100.00%		B5YJ64              	100.00%
Bootstrap support for Q75EY9 as seed ortholog is 100%.
Bootstrap support for B5YJ64 as seed ortholog is 100%.

Group of orthologs #78. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.yellowstonii:222

Q75EF3              	100.00%		B5YG44              	100.00%
Bootstrap support for Q75EF3 as seed ortholog is 99%.
Bootstrap support for B5YG44 as seed ortholog is 100%.

Group of orthologs #79. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:17 T.yellowstonii:221

Q74ZW9              	100.00%		B5YIF1              	100.00%
Bootstrap support for Q74ZW9 as seed ortholog is 30%.
Alternative seed ortholog is Q75FB3 (17 bits away from this cluster)
Bootstrap support for B5YIF1 as seed ortholog is 100%.

Group of orthologs #80. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.yellowstonii:220

Q751N1              	100.00%		B5YLA0              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for B5YLA0 as seed ortholog is 100%.

Group of orthologs #81. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.yellowstonii:218

Q751Q9              	100.00%		B5YL60              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for B5YL60 as seed ortholog is 100%.

Group of orthologs #82. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.yellowstonii:214

Q750Z7              	100.00%		B5YK82              	100.00%
Bootstrap support for Q750Z7 as seed ortholog is 100%.
Bootstrap support for B5YK82 as seed ortholog is 100%.

Group of orthologs #83. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 T.yellowstonii:211

Q756E4              	100.00%		B5YJU5              	100.00%
Bootstrap support for Q756E4 as seed ortholog is 100%.
Bootstrap support for B5YJU5 as seed ortholog is 100%.

Group of orthologs #84. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.yellowstonii:206

Q757Q6              	100.00%		B5YHB1              	100.00%
Bootstrap support for Q757Q6 as seed ortholog is 100%.
Bootstrap support for B5YHB1 as seed ortholog is 100%.

Group of orthologs #85. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.yellowstonii:206

Q75CF2              	100.00%		B5YKK8              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 100%.
Bootstrap support for B5YKK8 as seed ortholog is 100%.

Group of orthologs #86. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.yellowstonii:146

Q754H4              	100.00%		B5YJU7              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for B5YJU7 as seed ortholog is 100%.

Group of orthologs #87. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:19 T.yellowstonii:204

Q74ZS1              	100.00%		B5YJM2              	100.00%
                    	       		B5YFU5              	11.71%
Bootstrap support for Q74ZS1 as seed ortholog is 70%.
Alternative seed ortholog is Q75DX7 (19 bits away from this cluster)
Bootstrap support for B5YJM2 as seed ortholog is 100%.

Group of orthologs #88. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.yellowstonii:201

Q75DY0              	100.00%		B5YJZ4              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for B5YJZ4 as seed ortholog is 100%.

Group of orthologs #89. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.yellowstonii:197

Q755U7              	100.00%		B5YIZ6              	100.00%
Bootstrap support for Q755U7 as seed ortholog is 97%.
Bootstrap support for B5YIZ6 as seed ortholog is 100%.

Group of orthologs #90. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 T.yellowstonii:194

Q753N0              	100.00%		B5YJ91              	100.00%
Bootstrap support for Q753N0 as seed ortholog is 100%.
Bootstrap support for B5YJ91 as seed ortholog is 100%.

Group of orthologs #91. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.yellowstonii:193

Q75DG3              	100.00%		B5YLC5              	100.00%
Bootstrap support for Q75DG3 as seed ortholog is 100%.
Bootstrap support for B5YLC5 as seed ortholog is 100%.

Group of orthologs #92. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.yellowstonii:192

Q75D37              	100.00%		B5YIG6              	100.00%
Bootstrap support for Q75D37 as seed ortholog is 100%.
Bootstrap support for B5YIG6 as seed ortholog is 100%.

Group of orthologs #93. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.yellowstonii:191

Q75CD0              	100.00%		B5YIF0              	100.00%
Bootstrap support for Q75CD0 as seed ortholog is 100%.
Bootstrap support for B5YIF0 as seed ortholog is 100%.

Group of orthologs #94. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.yellowstonii:188

Q75CI4              	100.00%		B5YK48              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for B5YK48 as seed ortholog is 100%.

Group of orthologs #95. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.yellowstonii:187

Q756Y6              	100.00%		B5YKP3              	100.00%
Q756M1              	13.95%		
Bootstrap support for Q756Y6 as seed ortholog is 100%.
Bootstrap support for B5YKP3 as seed ortholog is 100%.

Group of orthologs #96. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.yellowstonii:187

Q75DL7              	100.00%		B5YJA6              	100.00%
Bootstrap support for Q75DL7 as seed ortholog is 100%.
Bootstrap support for B5YJA6 as seed ortholog is 100%.

Group of orthologs #97. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:32 T.yellowstonii:183

Q74ZL1              	100.00%		B5YHP1              	100.00%
Bootstrap support for Q74ZL1 as seed ortholog is 88%.
Bootstrap support for B5YHP1 as seed ortholog is 100%.

Group of orthologs #98. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:9 T.yellowstonii:180

Q755K6              	100.00%		B5YFV5              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 59%.
Alternative seed ortholog is Q755Y6 (9 bits away from this cluster)
Bootstrap support for B5YFV5 as seed ortholog is 100%.

Group of orthologs #99. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:20 T.yellowstonii:179

Q752R6              	100.00%		B5YH58              	100.00%
Bootstrap support for Q752R6 as seed ortholog is 88%.
Bootstrap support for B5YH58 as seed ortholog is 100%.

Group of orthologs #100. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:38 T.yellowstonii:179

Q750E3              	100.00%		B5YKN6              	100.00%
Bootstrap support for Q750E3 as seed ortholog is 84%.
Bootstrap support for B5YKN6 as seed ortholog is 100%.

Group of orthologs #101. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:117 T.yellowstonii:177

Q750R4              	100.00%		B5YG27              	100.00%
Bootstrap support for Q750R4 as seed ortholog is 99%.
Bootstrap support for B5YG27 as seed ortholog is 100%.

Group of orthologs #102. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.yellowstonii:177

Q75EI1              	100.00%		B5YGA0              	100.00%
Bootstrap support for Q75EI1 as seed ortholog is 99%.
Bootstrap support for B5YGA0 as seed ortholog is 100%.

Group of orthologs #103. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.yellowstonii:176

Q75B59              	100.00%		B5YJQ2              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for B5YJQ2 as seed ortholog is 100%.

Group of orthologs #104. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.yellowstonii:171

Q754I3              	100.00%		B5YI00              	100.00%
                    	       		B5YHS6              	9.91%
Bootstrap support for Q754I3 as seed ortholog is 86%.
Bootstrap support for B5YI00 as seed ortholog is 100%.

Group of orthologs #105. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.yellowstonii:168

Q75C28              	100.00%		B5YH36              	100.00%
Bootstrap support for Q75C28 as seed ortholog is 100%.
Bootstrap support for B5YH36 as seed ortholog is 100%.

Group of orthologs #106. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.yellowstonii:165

Q75DM3              	100.00%		B5YJI3              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for B5YJI3 as seed ortholog is 100%.

Group of orthologs #107. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.yellowstonii:163

Q750K5              	100.00%		B5YGI2              	100.00%
Bootstrap support for Q750K5 as seed ortholog is 100%.
Bootstrap support for B5YGI2 as seed ortholog is 100%.

Group of orthologs #108. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:24 T.yellowstonii:60

Q75A20              	100.00%		B5YJS7              	100.00%
Bootstrap support for Q75A20 as seed ortholog is 68%.
Alternative seed ortholog is Q755P2 (24 bits away from this cluster)
Bootstrap support for B5YJS7 as seed ortholog is 93%.

Group of orthologs #109. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.yellowstonii:162

Q74Z71              	100.00%		B5YJV0              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for B5YJV0 as seed ortholog is 100%.

Group of orthologs #110. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.yellowstonii:162

Q754W3              	100.00%		B5YIB7              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for B5YIB7 as seed ortholog is 100%.

Group of orthologs #111. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.yellowstonii:162

Q75CM8              	100.00%		B5YH48              	100.00%
Bootstrap support for Q75CM8 as seed ortholog is 100%.
Bootstrap support for B5YH48 as seed ortholog is 100%.

Group of orthologs #112. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:0 T.yellowstonii:160

O60027              	100.00%		B5YHE4              	100.00%
Bootstrap support for O60027 as seed ortholog is 47%.
Alternative seed ortholog is Q75AY4 (0 bits away from this cluster)
Bootstrap support for B5YHE4 as seed ortholog is 100%.

Group of orthologs #113. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.yellowstonii:160

Q74ZC7              	100.00%		B5YKP7              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for B5YKP7 as seed ortholog is 100%.

Group of orthologs #114. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.yellowstonii:160

Q757P3              	100.00%		B5YKY3              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for B5YKY3 as seed ortholog is 100%.

Group of orthologs #115. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.yellowstonii:159

Q74ZC0              	100.00%		B5YFS5              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for B5YFS5 as seed ortholog is 100%.

Group of orthologs #116. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.yellowstonii:159

Q756L5              	100.00%		B5YJD7              	100.00%
Bootstrap support for Q756L5 as seed ortholog is 100%.
Bootstrap support for B5YJD7 as seed ortholog is 100%.

Group of orthologs #117. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.yellowstonii:157

Q750K4              	100.00%		B5YHS2              	100.00%
Bootstrap support for Q750K4 as seed ortholog is 100%.
Bootstrap support for B5YHS2 as seed ortholog is 100%.

Group of orthologs #118. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.yellowstonii:155

Q750Y8              	100.00%		B5YL53              	100.00%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for B5YL53 as seed ortholog is 100%.

Group of orthologs #119. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.yellowstonii:154

Q751C8              	100.00%		B5YG52              	100.00%
Bootstrap support for Q751C8 as seed ortholog is 100%.
Bootstrap support for B5YG52 as seed ortholog is 100%.

Group of orthologs #120. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.yellowstonii:154

Q75CW4              	100.00%		B5YJT0              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for B5YJT0 as seed ortholog is 100%.

Group of orthologs #121. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.yellowstonii:153

Q753K9              	100.00%		B5YJB4              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 97%.
Bootstrap support for B5YJB4 as seed ortholog is 100%.

Group of orthologs #122. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.yellowstonii:66

Q757C6              	100.00%		B5YH63              	100.00%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for B5YH63 as seed ortholog is 94%.

Group of orthologs #123. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.yellowstonii:152

Q755M2              	100.00%		B5YIL2              	100.00%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for B5YIL2 as seed ortholog is 100%.

Group of orthologs #124. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.yellowstonii:151

Q758F4              	100.00%		B5YKH5              	100.00%
Q75DI5              	38.19%		
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for B5YKH5 as seed ortholog is 100%.

Group of orthologs #125. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.yellowstonii:151

Q758R3              	100.00%		B5YJI6              	100.00%
Bootstrap support for Q758R3 as seed ortholog is 100%.
Bootstrap support for B5YJI6 as seed ortholog is 100%.

Group of orthologs #126. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.yellowstonii:62

Q757K8              	100.00%		B5YG99              	100.00%
Bootstrap support for Q757K8 as seed ortholog is 96%.
Bootstrap support for B5YG99 as seed ortholog is 90%.

Group of orthologs #127. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.yellowstonii:149

Q75BL5              	100.00%		B5YG03              	100.00%
Bootstrap support for Q75BL5 as seed ortholog is 100%.
Bootstrap support for B5YG03 as seed ortholog is 100%.

Group of orthologs #128. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.yellowstonii:146

Q75BD2              	100.00%		B5YKM2              	100.00%
                    	       		B5YG84              	5.71%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for B5YKM2 as seed ortholog is 100%.

Group of orthologs #129. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.yellowstonii:146

Q756C6              	100.00%		B5YK93              	100.00%
Bootstrap support for Q756C6 as seed ortholog is 100%.
Bootstrap support for B5YK93 as seed ortholog is 100%.

Group of orthologs #130. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.yellowstonii:146

Q758G0              	100.00%		B5YJI4              	100.00%
Bootstrap support for Q758G0 as seed ortholog is 94%.
Bootstrap support for B5YJI4 as seed ortholog is 100%.

Group of orthologs #131. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.yellowstonii:146

Q75BA7              	100.00%		B5YI29              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for B5YI29 as seed ortholog is 100%.

Group of orthologs #132. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.yellowstonii:56

Q750S7              	100.00%		B5YHN3              	100.00%
Q75D78              	5.98%		
Bootstrap support for Q750S7 as seed ortholog is 100%.
Bootstrap support for B5YHN3 as seed ortholog is 93%.

Group of orthologs #133. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.yellowstonii:143

Q752L3              	100.00%		B5YFM1              	100.00%
Bootstrap support for Q752L3 as seed ortholog is 97%.
Bootstrap support for B5YFM1 as seed ortholog is 100%.

Group of orthologs #134. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.yellowstonii:142

Q756K6              	100.00%		B5YH35              	100.00%
                    	       		B5YIE5              	17.75%
Bootstrap support for Q756K6 as seed ortholog is 99%.
Bootstrap support for B5YH35 as seed ortholog is 100%.

Group of orthologs #135. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.yellowstonii:142

Q753P1              	100.00%		B5YKF9              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for B5YKF9 as seed ortholog is 100%.

Group of orthologs #136. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:39 T.yellowstonii:136

Q74Z38              	100.00%		B5YKW6              	100.00%
Q75CW3              	14.40%		
Bootstrap support for Q74Z38 as seed ortholog is 93%.
Bootstrap support for B5YKW6 as seed ortholog is 100%.

Group of orthologs #137. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:22 T.yellowstonii:135

Q754F1              	100.00%		B5YJJ0              	100.00%
Bootstrap support for Q754F1 as seed ortholog is 70%.
Alternative seed ortholog is Q74ZI0 (22 bits away from this cluster)
Bootstrap support for B5YJJ0 as seed ortholog is 100%.

Group of orthologs #138. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:19 T.yellowstonii:134

Q75BI5              	100.00%		B5YJR8              	100.00%
Q74Z27              	11.85%		
Q759G7              	10.26%		
Q75AM1              	7.07%		
Bootstrap support for Q75BI5 as seed ortholog is 68%.
Alternative seed ortholog is Q758Q0 (19 bits away from this cluster)
Bootstrap support for B5YJR8 as seed ortholog is 100%.

Group of orthologs #139. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.yellowstonii:129

Q751G6              	100.00%		B5YH83              	100.00%
Bootstrap support for Q751G6 as seed ortholog is 100%.
Bootstrap support for B5YH83 as seed ortholog is 100%.

Group of orthologs #140. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:23 T.yellowstonii:128

Q755L1              	100.00%		B5YKX4              	100.00%
Bootstrap support for Q755L1 as seed ortholog is 68%.
Alternative seed ortholog is Q758R9 (23 bits away from this cluster)
Bootstrap support for B5YKX4 as seed ortholog is 100%.

Group of orthologs #141. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.yellowstonii:128

Q759G5              	100.00%		B5YJK9              	100.00%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for B5YJK9 as seed ortholog is 100%.

Group of orthologs #142. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:28 T.yellowstonii:126

Q758C2              	100.00%		B5YIN0              	100.00%
                    	       		B5YHG6              	8.58%
                    	       		B5YIE3              	8.58%
Bootstrap support for Q758C2 as seed ortholog is 76%.
Bootstrap support for B5YIN0 as seed ortholog is 100%.

Group of orthologs #143. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.yellowstonii:126

Q757U9              	100.00%		B5YGH6              	100.00%
Bootstrap support for Q757U9 as seed ortholog is 100%.
Bootstrap support for B5YGH6 as seed ortholog is 100%.

Group of orthologs #144. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.yellowstonii:126

Q756F7              	100.00%		B5YJ36              	100.00%
Bootstrap support for Q756F7 as seed ortholog is 100%.
Bootstrap support for B5YJ36 as seed ortholog is 100%.

Group of orthologs #145. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.yellowstonii:126

Q756N6              	100.00%		B5YLE1              	100.00%
Bootstrap support for Q756N6 as seed ortholog is 100%.
Bootstrap support for B5YLE1 as seed ortholog is 100%.

Group of orthologs #146. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.yellowstonii:126

Q75DT0              	100.00%		B5YFN4              	100.00%
Bootstrap support for Q75DT0 as seed ortholog is 100%.
Bootstrap support for B5YFN4 as seed ortholog is 100%.

Group of orthologs #147. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.yellowstonii:126

Q75D95              	100.00%		B5YKP1              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for B5YKP1 as seed ortholog is 100%.

Group of orthologs #148. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:9 T.yellowstonii:123

Q753F3              	100.00%		B5YJT4              	100.00%
Bootstrap support for Q753F3 as seed ortholog is 57%.
Alternative seed ortholog is Q754X9 (9 bits away from this cluster)
Bootstrap support for B5YJT4 as seed ortholog is 100%.

Group of orthologs #149. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.yellowstonii:123

Q75AP9              	100.00%		B5YG47              	100.00%
Bootstrap support for Q75AP9 as seed ortholog is 100%.
Bootstrap support for B5YG47 as seed ortholog is 100%.

Group of orthologs #150. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.yellowstonii:121

Q75AL3              	100.00%		B5YGC1              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for B5YGC1 as seed ortholog is 100%.

Group of orthologs #151. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.yellowstonii:120

Q75B47              	100.00%		B5YKN8              	100.00%
Bootstrap support for Q75B47 as seed ortholog is 100%.
Bootstrap support for B5YKN8 as seed ortholog is 100%.

Group of orthologs #152. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.yellowstonii:118

Q74ZY2              	100.00%		B5YFM2              	100.00%
Bootstrap support for Q74ZY2 as seed ortholog is 100%.
Bootstrap support for B5YFM2 as seed ortholog is 100%.

Group of orthologs #153. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:30 T.yellowstonii:118

Q750H1              	100.00%		B5YJW3              	100.00%
Bootstrap support for Q750H1 as seed ortholog is 78%.
Bootstrap support for B5YJW3 as seed ortholog is 100%.

Group of orthologs #154. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.yellowstonii:118

Q75B26              	100.00%		B5YH65              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for B5YH65 as seed ortholog is 100%.

Group of orthologs #155. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.yellowstonii:118

Q75DD1              	100.00%		B5YGI5              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for B5YGI5 as seed ortholog is 100%.

Group of orthologs #156. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 T.yellowstonii:117

P62513              	100.00%		B5YL68              	100.00%
Bootstrap support for P62513 as seed ortholog is 100%.
Bootstrap support for B5YL68 as seed ortholog is 100%.

Group of orthologs #157. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:15 T.yellowstonii:116

Q750B0              	100.00%		B5YGH3              	100.00%
Q75CJ1              	18.41%		
Q751N6              	17.35%		
Bootstrap support for Q750B0 as seed ortholog is 63%.
Alternative seed ortholog is Q753U3 (15 bits away from this cluster)
Bootstrap support for B5YGH3 as seed ortholog is 100%.

Group of orthologs #158. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.yellowstonii:115

Q757K9              	100.00%		B5YI11              	100.00%
Q75DN9              	12.01%		
Bootstrap support for Q757K9 as seed ortholog is 100%.
Bootstrap support for B5YI11 as seed ortholog is 100%.

Group of orthologs #159. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.yellowstonii:115

Q751B3              	100.00%		B5YKX8              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for B5YKX8 as seed ortholog is 100%.

Group of orthologs #160. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.yellowstonii:114

Q74ZG6              	100.00%		B5YHC7              	100.00%
Bootstrap support for Q74ZG6 as seed ortholog is 100%.
Bootstrap support for B5YHC7 as seed ortholog is 100%.

Group of orthologs #161. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:21 T.yellowstonii:114

Q752Q7              	100.00%		B5YG19              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 65%.
Alternative seed ortholog is Q75B77 (21 bits away from this cluster)
Bootstrap support for B5YG19 as seed ortholog is 100%.

Group of orthologs #162. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.yellowstonii:113

Q75DL1              	100.00%		B5YGD9              	100.00%
Bootstrap support for Q75DL1 as seed ortholog is 98%.
Bootstrap support for B5YGD9 as seed ortholog is 100%.

Group of orthologs #163. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.yellowstonii:112

Q75E17              	100.00%		B5YFW2              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 100%.
Bootstrap support for B5YFW2 as seed ortholog is 100%.

Group of orthologs #164. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.yellowstonii:111

Q75C90              	100.00%		B5YGF7              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for B5YGF7 as seed ortholog is 100%.

Group of orthologs #165. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.yellowstonii:110

Q75CZ3              	100.00%		B5YKT8              	100.00%
                    	       		B5YJ85              	5.24%
Bootstrap support for Q75CZ3 as seed ortholog is 87%.
Bootstrap support for B5YKT8 as seed ortholog is 100%.

Group of orthologs #166. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.yellowstonii:110

Q75E22              	100.00%		B5YJ89              	100.00%
Bootstrap support for Q75E22 as seed ortholog is 100%.
Bootstrap support for B5YJ89 as seed ortholog is 100%.

Group of orthologs #167. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.yellowstonii:108

Q74ZF6              	100.00%		B5YHP0              	100.00%
Bootstrap support for Q74ZF6 as seed ortholog is 100%.
Bootstrap support for B5YHP0 as seed ortholog is 100%.

Group of orthologs #168. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.yellowstonii:108

Q753Q5              	100.00%		B5YGH9              	100.00%
Bootstrap support for Q753Q5 as seed ortholog is 99%.
Bootstrap support for B5YGH9 as seed ortholog is 100%.

Group of orthologs #169. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.yellowstonii:108

Q75AK8              	100.00%		B5YJ68              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for B5YJ68 as seed ortholog is 100%.

Group of orthologs #170. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.yellowstonii:107

Q74Z12              	100.00%		B5YJT9              	100.00%
Q754A0              	43.18%		
Q75BA6              	8.39%		
Bootstrap support for Q74Z12 as seed ortholog is 100%.
Bootstrap support for B5YJT9 as seed ortholog is 100%.

Group of orthologs #171. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.yellowstonii:107

Q75CU5              	100.00%		B5YI23              	100.00%
Bootstrap support for Q75CU5 as seed ortholog is 100%.
Bootstrap support for B5YI23 as seed ortholog is 100%.

Group of orthologs #172. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:24 T.yellowstonii:106

Q75E33              	100.00%		B5YHD1              	100.00%
Bootstrap support for Q75E33 as seed ortholog is 79%.
Bootstrap support for B5YHD1 as seed ortholog is 100%.

Group of orthologs #173. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.yellowstonii:105

Q74Z48              	100.00%		B5YJ78              	100.00%
Bootstrap support for Q74Z48 as seed ortholog is 100%.
Bootstrap support for B5YJ78 as seed ortholog is 100%.

Group of orthologs #174. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:34 T.yellowstonii:104

Q75DQ0              	100.00%		B5YJX1              	100.00%
Q757I1              	63.58%		
Q75EJ5              	62.35%		
Bootstrap support for Q75DQ0 as seed ortholog is 81%.
Bootstrap support for B5YJX1 as seed ortholog is 100%.

Group of orthologs #175. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.yellowstonii:27

Q752H4              	100.00%		B5YGB4              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for B5YGB4 as seed ortholog is 75%.

Group of orthologs #176. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.yellowstonii:104

Q755M0              	100.00%		B5YJQ6              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for B5YJQ6 as seed ortholog is 100%.

Group of orthologs #177. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.yellowstonii:104

Q75DY4              	100.00%		B5YG35              	100.00%
Bootstrap support for Q75DY4 as seed ortholog is 97%.
Bootstrap support for B5YG35 as seed ortholog is 100%.

Group of orthologs #178. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.yellowstonii:103

Q75B73              	100.00%		B5YHK5              	100.00%
Bootstrap support for Q75B73 as seed ortholog is 100%.
Bootstrap support for B5YHK5 as seed ortholog is 100%.

Group of orthologs #179. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.yellowstonii:103

Q75D55              	100.00%		B5YHK4              	100.00%
Bootstrap support for Q75D55 as seed ortholog is 100%.
Bootstrap support for B5YHK4 as seed ortholog is 100%.

Group of orthologs #180. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.yellowstonii:102

Q75AV0              	100.00%		B5YH64              	100.00%
Bootstrap support for Q75AV0 as seed ortholog is 100%.
Bootstrap support for B5YH64 as seed ortholog is 100%.

Group of orthologs #181. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.yellowstonii:101

Q75BJ3              	100.00%		B5YJX0              	100.00%
Bootstrap support for Q75BJ3 as seed ortholog is 100%.
Bootstrap support for B5YJX0 as seed ortholog is 100%.

Group of orthologs #182. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:32 T.yellowstonii:101

Q75D31              	100.00%		B5YIG5              	100.00%
Bootstrap support for Q75D31 as seed ortholog is 80%.
Bootstrap support for B5YIG5 as seed ortholog is 100%.

Group of orthologs #183. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.yellowstonii:100

Q75B31              	100.00%		B5YIL4              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for B5YIL4 as seed ortholog is 100%.

Group of orthologs #184. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.yellowstonii:96

Q75ET7              	100.00%		B5YFP2              	100.00%
Bootstrap support for Q75ET7 as seed ortholog is 100%.
Bootstrap support for B5YFP2 as seed ortholog is 100%.

Group of orthologs #185. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.yellowstonii:94

Q75G39              	100.00%		B5YGC9              	100.00%
Bootstrap support for Q75G39 as seed ortholog is 100%.
Bootstrap support for B5YGC9 as seed ortholog is 100%.

Group of orthologs #186. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.yellowstonii:93

Q74Z11              	100.00%		B5YHQ1              	100.00%
Bootstrap support for Q74Z11 as seed ortholog is 100%.
Bootstrap support for B5YHQ1 as seed ortholog is 100%.

Group of orthologs #187. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.yellowstonii:93

Q750W4              	100.00%		B5YHE3              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for B5YHE3 as seed ortholog is 100%.

Group of orthologs #188. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.yellowstonii:91

Q759X1              	100.00%		B5YGI4              	100.00%
Q759M4              	36.46%		
Q75AT4              	21.84%		
Bootstrap support for Q759X1 as seed ortholog is 100%.
Bootstrap support for B5YGI4 as seed ortholog is 100%.

Group of orthologs #189. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.yellowstonii:91

Q75E78              	100.00%		B5YH28              	100.00%
                    	       		B5YH27              	16.59%
Bootstrap support for Q75E78 as seed ortholog is 100%.
Bootstrap support for B5YH28 as seed ortholog is 100%.

Group of orthologs #190. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.yellowstonii:91

Q758Y2              	100.00%		B5YKS1              	100.00%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for B5YKS1 as seed ortholog is 100%.

Group of orthologs #191. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.yellowstonii:90

Q759I8              	100.00%		B5YK06              	100.00%
Q752E8              	34.81%		
Bootstrap support for Q759I8 as seed ortholog is 100%.
Bootstrap support for B5YK06 as seed ortholog is 100%.

Group of orthologs #192. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.yellowstonii:90

Q755F1              	100.00%		B5YK75              	100.00%
Bootstrap support for Q755F1 as seed ortholog is 100%.
Bootstrap support for B5YK75 as seed ortholog is 100%.

Group of orthologs #193. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:21 T.yellowstonii:88

Q757X9              	100.00%		B5YG37              	100.00%
Bootstrap support for Q757X9 as seed ortholog is 81%.
Bootstrap support for B5YG37 as seed ortholog is 100%.

Group of orthologs #194. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.yellowstonii:88

Q758N0              	100.00%		B5YJ43              	100.00%
Bootstrap support for Q758N0 as seed ortholog is 100%.
Bootstrap support for B5YJ43 as seed ortholog is 100%.

Group of orthologs #195. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.yellowstonii:87

Q74Z98              	100.00%		B5YKV0              	100.00%
Q757V3              	19.44%		
Bootstrap support for Q74Z98 as seed ortholog is 100%.
Bootstrap support for B5YKV0 as seed ortholog is 100%.

Group of orthologs #196. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.yellowstonii:87

Q75CP8              	100.00%		B5YGI1              	100.00%
Bootstrap support for Q75CP8 as seed ortholog is 100%.
Bootstrap support for B5YGI1 as seed ortholog is 100%.

Group of orthologs #197. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.yellowstonii:86

Q74ZX8              	100.00%		B5YFW1              	100.00%
Bootstrap support for Q74ZX8 as seed ortholog is 100%.
Bootstrap support for B5YFW1 as seed ortholog is 100%.

Group of orthologs #198. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.yellowstonii:86

Q758L0              	100.00%		B5YHI1              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for B5YHI1 as seed ortholog is 100%.

Group of orthologs #199. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.yellowstonii:86

Q75B76              	100.00%		B5YG40              	100.00%
Bootstrap support for Q75B76 as seed ortholog is 100%.
Bootstrap support for B5YG40 as seed ortholog is 100%.

Group of orthologs #200. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.yellowstonii:86

Q755T1              	100.00%		B5YKU6              	100.00%
Bootstrap support for Q755T1 as seed ortholog is 100%.
Bootstrap support for B5YKU6 as seed ortholog is 100%.

Group of orthologs #201. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.yellowstonii:83

Q755B4              	100.00%		B5YFV9              	100.00%
Bootstrap support for Q755B4 as seed ortholog is 100%.
Bootstrap support for B5YFV9 as seed ortholog is 100%.

Group of orthologs #202. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:31 T.yellowstonii:82

Q75AQ0              	100.00%		B5YG32              	100.00%
Bootstrap support for Q75AQ0 as seed ortholog is 93%.
Bootstrap support for B5YG32 as seed ortholog is 100%.

Group of orthologs #203. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.yellowstonii:82

Q75EG1              	100.00%		B5YK81              	100.00%
Bootstrap support for Q75EG1 as seed ortholog is 100%.
Bootstrap support for B5YK81 as seed ortholog is 100%.

Group of orthologs #204. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.yellowstonii:81

Q752Z9              	100.00%		B5YHP2              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for B5YHP2 as seed ortholog is 100%.

Group of orthologs #205. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.yellowstonii:81

Q757U0              	100.00%		B5YG29              	100.00%
Bootstrap support for Q757U0 as seed ortholog is 100%.
Bootstrap support for B5YG29 as seed ortholog is 100%.

Group of orthologs #206. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.yellowstonii:81

Q75BT4              	100.00%		B5YHK1              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for B5YHK1 as seed ortholog is 100%.

Group of orthologs #207. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:18 T.yellowstonii:81

Q75CQ0              	100.00%		B5YI85              	100.00%
Bootstrap support for Q75CQ0 as seed ortholog is 82%.
Bootstrap support for B5YI85 as seed ortholog is 100%.

Group of orthologs #208. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.yellowstonii:81

Q75CE1              	100.00%		B5YJH1              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for B5YJH1 as seed ortholog is 100%.

Group of orthologs #209. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.yellowstonii:80

Q753A2              	100.00%		B5YKX9              	100.00%
Q758F8              	20.40%		
Q75A16              	17.58%		
Bootstrap support for Q753A2 as seed ortholog is 100%.
Bootstrap support for B5YKX9 as seed ortholog is 100%.

Group of orthologs #210. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.yellowstonii:80

Q750Q2              	100.00%		B5YJY2              	100.00%
Bootstrap support for Q750Q2 as seed ortholog is 100%.
Bootstrap support for B5YJY2 as seed ortholog is 100%.

Group of orthologs #211. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.yellowstonii:80

Q75BE8              	100.00%		B5YL62              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for B5YL62 as seed ortholog is 100%.

Group of orthologs #212. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.yellowstonii:79

Q74Z77              	100.00%		B5YL58              	100.00%
Bootstrap support for Q74Z77 as seed ortholog is 100%.
Bootstrap support for B5YL58 as seed ortholog is 100%.

Group of orthologs #213. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.yellowstonii:78

Q752M7              	100.00%		B5YFM5              	100.00%
Bootstrap support for Q752M7 as seed ortholog is 100%.
Bootstrap support for B5YFM5 as seed ortholog is 100%.

Group of orthologs #214. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.yellowstonii:78

Q757V0              	100.00%		B5YKU8              	100.00%
Bootstrap support for Q757V0 as seed ortholog is 100%.
Bootstrap support for B5YKU8 as seed ortholog is 100%.

Group of orthologs #215. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.yellowstonii:77

Q75B33              	100.00%		B5YIQ8              	100.00%
Bootstrap support for Q75B33 as seed ortholog is 100%.
Bootstrap support for B5YIQ8 as seed ortholog is 100%.

Group of orthologs #216. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.yellowstonii:77

Q75E05              	100.00%		B5YHX3              	100.00%
Bootstrap support for Q75E05 as seed ortholog is 100%.
Bootstrap support for B5YHX3 as seed ortholog is 100%.

Group of orthologs #217. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.yellowstonii:77

Q75DV3              	100.00%		B5YIE4              	100.00%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for B5YIE4 as seed ortholog is 100%.

Group of orthologs #218. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.yellowstonii:76

Q755F6              	100.00%		B5YJL6              	100.00%
                    	       		B5YJC2              	8.55%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for B5YJL6 as seed ortholog is 100%.

Group of orthologs #219. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.yellowstonii:76

Q756M8              	100.00%		B5YFN2              	100.00%
Bootstrap support for Q756M8 as seed ortholog is 100%.
Bootstrap support for B5YFN2 as seed ortholog is 100%.

Group of orthologs #220. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.yellowstonii:76

Q759Q9              	100.00%		B5YJV1              	100.00%
Bootstrap support for Q759Q9 as seed ortholog is 100%.
Bootstrap support for B5YJV1 as seed ortholog is 100%.

Group of orthologs #221. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.yellowstonii:75

Q758E0              	100.00%		B5YG24              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for B5YG24 as seed ortholog is 100%.

Group of orthologs #222. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:26 T.yellowstonii:74

Q751D0              	100.00%		B5YG43              	100.00%
Bootstrap support for Q751D0 as seed ortholog is 91%.
Bootstrap support for B5YG43 as seed ortholog is 100%.

Group of orthologs #223. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.yellowstonii:74

Q75EA0              	100.00%		B5YG30              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for B5YG30 as seed ortholog is 100%.

Group of orthologs #224. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.yellowstonii:74

Q75CW2              	100.00%		B5YHV2              	100.00%
Bootstrap support for Q75CW2 as seed ortholog is 100%.
Bootstrap support for B5YHV2 as seed ortholog is 100%.

Group of orthologs #225. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.yellowstonii:74

Q75DP6              	100.00%		B5YH53              	100.00%
Bootstrap support for Q75DP6 as seed ortholog is 100%.
Bootstrap support for B5YH53 as seed ortholog is 100%.

Group of orthologs #226. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.yellowstonii:71

Q75DZ9              	100.00%		B5YGX0              	100.00%
                    	       		B5YHC5              	12.32%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for B5YGX0 as seed ortholog is 100%.

Group of orthologs #227. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.yellowstonii:71

Q750E7              	100.00%		B5YJ33              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 100%.
Bootstrap support for B5YJ33 as seed ortholog is 100%.

Group of orthologs #228. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:11 T.yellowstonii:71

Q755U6              	100.00%		B5YG25              	100.00%
Bootstrap support for Q755U6 as seed ortholog is 65%.
Alternative seed ortholog is Q756F0 (11 bits away from this cluster)
Bootstrap support for B5YG25 as seed ortholog is 100%.

Group of orthologs #229. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.yellowstonii:71

Q759W2              	100.00%		B5YKQ3              	100.00%
Bootstrap support for Q759W2 as seed ortholog is 100%.
Bootstrap support for B5YKQ3 as seed ortholog is 100%.

Group of orthologs #230. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.yellowstonii:70

Q75F02              	100.00%		B5YGE2              	100.00%
Bootstrap support for Q75F02 as seed ortholog is 100%.
Bootstrap support for B5YGE2 as seed ortholog is 100%.

Group of orthologs #231. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.yellowstonii:69

Q755A5              	100.00%		B5YJX3              	100.00%
Q755N4              	26.33%		
Q75B50              	19.80%		
Q75EW9              	17.24%		
Q75F95              	15.10%		
Q752X1              	14.69%		
Q74Z73              	14.59%		
Q757U8              	14.39%		
Q75BL8              	11.33%		
Q756G5              	11.12%		
Q757I6              	10.51%		
Q759L6              	8.57%		
Q750F8              	8.37%		
Q754J2              	7.14%		
Bootstrap support for Q755A5 as seed ortholog is 100%.
Bootstrap support for B5YJX3 as seed ortholog is 100%.

Group of orthologs #232. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.yellowstonii:15

Q754S1              	100.00%		B5YJM1              	100.00%
                    	       		B5YJC5              	5.88%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for B5YJM1 as seed ortholog is 61%.
Alternative seed ortholog is B5YFX8 (15 bits away from this cluster)

Group of orthologs #233. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.yellowstonii:24

Q754B3              	100.00%		B5YK63              	100.00%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for B5YK63 as seed ortholog is 81%.

Group of orthologs #234. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.yellowstonii:69

Q75BA9              	100.00%		B5YK64              	100.00%
Bootstrap support for Q75BA9 as seed ortholog is 100%.
Bootstrap support for B5YK64 as seed ortholog is 100%.

Group of orthologs #235. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.yellowstonii:68

Q74ZF7              	100.00%		B5YIM6              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for B5YIM6 as seed ortholog is 100%.

Group of orthologs #236. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.yellowstonii:66

Q74ZR2              	100.00%		B5YHY0              	100.00%
Q756Q2              	52.15%		
Q75A21              	47.33%		
Q756X4              	45.44%		
Q754A6              	32.19%		
Q754W8              	28.40%		
Q75EJ6              	20.83%		
Bootstrap support for Q74ZR2 as seed ortholog is 100%.
Bootstrap support for B5YHY0 as seed ortholog is 100%.

Group of orthologs #237. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.yellowstonii:66

Q750G6              	100.00%		B5YK94              	100.00%
Bootstrap support for Q750G6 as seed ortholog is 100%.
Bootstrap support for B5YK94 as seed ortholog is 100%.

Group of orthologs #238. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:4 T.yellowstonii:66

Q75C42              	100.00%		B5YFZ1              	100.00%
Bootstrap support for Q75C42 as seed ortholog is 57%.
Alternative seed ortholog is Q75BG7 (4 bits away from this cluster)
Bootstrap support for B5YFZ1 as seed ortholog is 100%.

Group of orthologs #239. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.yellowstonii:66

Q75D52              	100.00%		B5YG51              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for B5YG51 as seed ortholog is 100%.

Group of orthologs #240. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.yellowstonii:65

Q758B4              	100.00%		B5YG21              	100.00%
Bootstrap support for Q758B4 as seed ortholog is 100%.
Bootstrap support for B5YG21 as seed ortholog is 100%.

Group of orthologs #241. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.yellowstonii:64

Q755M8              	100.00%		B5YKC3              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for B5YKC3 as seed ortholog is 100%.

Group of orthologs #242. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.yellowstonii:64

Q75C01              	100.00%		B5YH60              	100.00%
Bootstrap support for Q75C01 as seed ortholog is 100%.
Bootstrap support for B5YH60 as seed ortholog is 100%.

Group of orthologs #243. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.yellowstonii:62

D8FGG9              	100.00%		B5YIQ1              	100.00%
Q755Q9              	100.00%		B5YI86              	100.00%
Q75F56              	100.00%		
Q75BF9              	96.47%		
Q752Z6              	75.97%		
Q752E3              	16.61%		
Q755Y5              	12.37%		
Bootstrap support for D8FGG9 as seed ortholog is 100%.
Bootstrap support for Q755Q9 as seed ortholog is 100%.
Bootstrap support for Q75F56 as seed ortholog is 100%.
Bootstrap support for B5YIQ1 as seed ortholog is 100%.
Bootstrap support for B5YI86 as seed ortholog is 100%.

Group of orthologs #244. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.yellowstonii:62

Q75AE1              	100.00%		B5YKZ7              	100.00%
Q754U8              	15.26%		
Q755W0              	12.19%		
Q75BS4              	11.42%		
Q74ZC1              	11.13%		
Q750Q4              	10.27%		
Q75C39              	9.88%		
Q751D1              	7.20%		
Bootstrap support for Q75AE1 as seed ortholog is 100%.
Bootstrap support for B5YKZ7 as seed ortholog is 100%.

Group of orthologs #245. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.yellowstonii:62

Q750F7              	100.00%		B5YGE4              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for B5YGE4 as seed ortholog is 100%.

Group of orthologs #246. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.yellowstonii:62

Q759H6              	100.00%		B5YGZ8              	100.00%
Bootstrap support for Q759H6 as seed ortholog is 100%.
Bootstrap support for B5YGZ8 as seed ortholog is 100%.

Group of orthologs #247. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.yellowstonii:61

Q752X8              	100.00%		B5YG54              	100.00%
Bootstrap support for Q752X8 as seed ortholog is 100%.
Bootstrap support for B5YG54 as seed ortholog is 100%.

Group of orthologs #248. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.yellowstonii:61

Q759L8              	100.00%		B5YGH8              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for B5YGH8 as seed ortholog is 100%.

Group of orthologs #249. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.yellowstonii:60

Q757B2              	100.00%		B5YIF5              	100.00%
Bootstrap support for Q757B2 as seed ortholog is 100%.
Bootstrap support for B5YIF5 as seed ortholog is 100%.

Group of orthologs #250. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.yellowstonii:60

Q75BT9              	100.00%		B5YGY6              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for B5YGY6 as seed ortholog is 100%.

Group of orthologs #251. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.yellowstonii:58

Q75C62              	100.00%		B5YHQ6              	100.00%
Q75AL4              	18.10%		B5YJH0              	5.04%
Q752Y4              	15.47%		
Bootstrap support for Q75C62 as seed ortholog is 100%.
Bootstrap support for B5YHQ6 as seed ortholog is 100%.

Group of orthologs #252. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:2 T.yellowstonii:58

Q752M0              	100.00%		B5YIN8              	100.00%
Bootstrap support for Q752M0 as seed ortholog is 54%.
Alternative seed ortholog is Q75C60 (2 bits away from this cluster)
Bootstrap support for B5YIN8 as seed ortholog is 100%.

Group of orthologs #253. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.yellowstonii:58

Q753N5              	100.00%		B5YKV9              	100.00%
Bootstrap support for Q753N5 as seed ortholog is 100%.
Bootstrap support for B5YKV9 as seed ortholog is 100%.

Group of orthologs #254. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.yellowstonii:57

Q75FA9              	100.00%		B5YJJ4              	100.00%
Bootstrap support for Q75FA9 as seed ortholog is 100%.
Bootstrap support for B5YJJ4 as seed ortholog is 100%.

Group of orthologs #255. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.yellowstonii:56

Q75B46              	100.00%		B5YID5              	100.00%
                    	       		B5YIM1              	12.24%
Bootstrap support for Q75B46 as seed ortholog is 100%.
Bootstrap support for B5YID5 as seed ortholog is 100%.

Group of orthologs #256. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.yellowstonii:55

Q74ZB8              	100.00%		B5YGC7              	100.00%
Bootstrap support for Q74ZB8 as seed ortholog is 100%.
Bootstrap support for B5YGC7 as seed ortholog is 100%.

Group of orthologs #257. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.yellowstonii:55

Q75D16              	100.00%		B5YG58              	100.00%
Bootstrap support for Q75D16 as seed ortholog is 100%.
Bootstrap support for B5YG58 as seed ortholog is 100%.

Group of orthologs #258. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.yellowstonii:54

Q754B8              	100.00%		B5YGJ1              	100.00%
                    	       		B5YFL8              	25.90%
                    	       		B5YK32              	23.49%
                    	       		B5YI15              	18.88%
                    	       		B5YKF2              	16.67%
                    	       		B5YG83              	12.85%
                    	       		B5YK42              	10.04%
                    	       		B5YGS0              	9.64%
                    	       		B5YK41              	9.64%
                    	       		B5YH56              	9.44%
                    	       		B5YG10              	8.63%
                    	       		B5YHF1              	8.03%
                    	       		B5YKL9              	7.23%
                    	       		B5YLD3              	7.03%
                    	       		B5YI82              	6.83%
                    	       		B5YKY9              	6.83%
                    	       		B5YH74              	6.63%
                    	       		B5YGX1              	6.63%
                    	       		B5YHJ7              	5.22%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for B5YGJ1 as seed ortholog is 100%.

Group of orthologs #259. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.yellowstonii:54

Q756A4              	100.00%		B5YK98              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for B5YK98 as seed ortholog is 100%.

Group of orthologs #260. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.yellowstonii:53

Q8J1F7              	100.00%		B5YLA3              	100.00%
Bootstrap support for Q8J1F7 as seed ortholog is 100%.
Bootstrap support for B5YLA3 as seed ortholog is 100%.

Group of orthologs #261. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.yellowstonii:52

Q75D36              	100.00%		B5YIH1              	100.00%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for B5YIH1 as seed ortholog is 100%.

Group of orthologs #262. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.yellowstonii:51

Q757I5              	100.00%		B5YG62              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for B5YG62 as seed ortholog is 100%.

Group of orthologs #263. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.yellowstonii:51

Q75DI4              	100.00%		B5YG48              	100.00%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for B5YG48 as seed ortholog is 100%.

Group of orthologs #264. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.yellowstonii:50

Q75E11              	100.00%		B5YG41              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for B5YG41 as seed ortholog is 100%.

Group of orthologs #265. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.yellowstonii:50

Q75EI7              	100.00%		B5YGY5              	100.00%
Bootstrap support for Q75EI7 as seed ortholog is 100%.
Bootstrap support for B5YGY5 as seed ortholog is 100%.

Group of orthologs #266. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.yellowstonii:49

Q753R7              	100.00%		B5YIS2              	100.00%
Bootstrap support for Q753R7 as seed ortholog is 100%.
Bootstrap support for B5YIS2 as seed ortholog is 100%.

Group of orthologs #267. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.yellowstonii:48

Q752J5              	100.00%		B5YG33              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for B5YG33 as seed ortholog is 100%.

Group of orthologs #268. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.yellowstonii:47

Q75C81              	100.00%		B5YFY8              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 100%.
Bootstrap support for B5YFY8 as seed ortholog is 100%.

Group of orthologs #269. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.yellowstonii:47

Q75C33              	100.00%		B5YL18              	100.00%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for B5YL18 as seed ortholog is 100%.

Group of orthologs #270. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:5 T.yellowstonii:45

Q75EX2              	100.00%		B5YGJ8              	100.00%
Bootstrap support for Q75EX2 as seed ortholog is 46%.
Alternative seed ortholog is Q75A40 (5 bits away from this cluster)
Bootstrap support for B5YGJ8 as seed ortholog is 100%.

Group of orthologs #271. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.yellowstonii:45

Q75EF2              	100.00%		B5YJF7              	100.00%
Bootstrap support for Q75EF2 as seed ortholog is 100%.
Bootstrap support for B5YJF7 as seed ortholog is 100%.

Group of orthologs #272. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.yellowstonii:44

Q75DE1              	100.00%		B5YHC8              	100.00%
Bootstrap support for Q75DE1 as seed ortholog is 100%.
Bootstrap support for B5YHC8 as seed ortholog is 100%.

Group of orthologs #273. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.yellowstonii:43

Q750A2              	100.00%		B5YJ76              	100.00%
Q756H4              	10.84%		
Bootstrap support for Q750A2 as seed ortholog is 100%.
Bootstrap support for B5YJ76 as seed ortholog is 100%.

Group of orthologs #274. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.yellowstonii:43

Q75AK4              	100.00%		B5YJH6              	100.00%
Bootstrap support for Q75AK4 as seed ortholog is 100%.
Bootstrap support for B5YJH6 as seed ortholog is 100%.

Group of orthologs #275. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.yellowstonii:42

Q750D3              	100.00%		B5YK67              	100.00%
Bootstrap support for Q750D3 as seed ortholog is 100%.
Bootstrap support for B5YK67 as seed ortholog is 100%.

Group of orthologs #276. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.yellowstonii:41

Q75B45              	100.00%		B5YGI6              	100.00%
Bootstrap support for Q75B45 as seed ortholog is 100%.
Bootstrap support for B5YGI6 as seed ortholog is 100%.

Group of orthologs #277. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.yellowstonii:40

Q75EL3              	100.00%		B5YKY4              	100.00%
Bootstrap support for Q75EL3 as seed ortholog is 100%.
Bootstrap support for B5YKY4 as seed ortholog is 100%.