###################################
1466 groups of orthologs
1543 in-paralogs from A.gossypii
1708 in-paralogs from T.pseudonana
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2851 bits
Score difference with first non-orthologous sequence - A.gossypii:2851 T.pseudonana:1330

Q75D15              	100.00%		B8BVU2              	100.00%
Bootstrap support for Q75D15 as seed ortholog is 100%.
Bootstrap support for B8BVU2 as seed ortholog is 100%.

Group of orthologs #2. Best score 1908 bits
Score difference with first non-orthologous sequence - A.gossypii:1908 T.pseudonana:963

Q9C1M7              	100.00%		B5YNC3              	100.00%
Bootstrap support for Q9C1M7 as seed ortholog is 100%.
Bootstrap support for B5YNC3 as seed ortholog is 100%.

Group of orthologs #3. Best score 1513 bits
Score difference with first non-orthologous sequence - A.gossypii:438 T.pseudonana:12

Q75BK8              	100.00%		B8BZG0              	100.00%
Bootstrap support for Q75BK8 as seed ortholog is 100%.
Bootstrap support for B8BZG0 as seed ortholog is 53%.
Alternative seed ortholog is B8C8T5 (12 bits away from this cluster)

Group of orthologs #4. Best score 1497 bits
Score difference with first non-orthologous sequence - A.gossypii:1497 T.pseudonana:54

Q75EK8              	100.00%		B8BVD1              	100.00%
Bootstrap support for Q75EK8 as seed ortholog is 100%.
Bootstrap support for B8BVD1 as seed ortholog is 69%.
Alternative seed ortholog is B5YMF5 (54 bits away from this cluster)

Group of orthologs #5. Best score 1429 bits
Score difference with first non-orthologous sequence - A.gossypii:1429 T.pseudonana:442

Q759I7              	100.00%		B8CBI7              	100.00%
Bootstrap support for Q759I7 as seed ortholog is 100%.
Bootstrap support for B8CBI7 as seed ortholog is 100%.

Group of orthologs #6. Best score 1408 bits
Score difference with first non-orthologous sequence - A.gossypii:1408 T.pseudonana:1408

Q74ZT5              	100.00%		B5YNG2              	100.00%
Bootstrap support for Q74ZT5 as seed ortholog is 100%.
Bootstrap support for B5YNG2 as seed ortholog is 100%.

Group of orthologs #7. Best score 1378 bits
Score difference with first non-orthologous sequence - A.gossypii:1378 T.pseudonana:1378

Q75A34              	100.00%		B8BQ02              	100.00%
Bootstrap support for Q75A34 as seed ortholog is 100%.
Bootstrap support for B8BQ02 as seed ortholog is 100%.

Group of orthologs #8. Best score 1345 bits
Score difference with first non-orthologous sequence - A.gossypii:1345 T.pseudonana:1074

Q753Q4              	100.00%		B8C598              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for B8C598 as seed ortholog is 100%.

Group of orthologs #9. Best score 1339 bits
Score difference with first non-orthologous sequence - A.gossypii:1339 T.pseudonana:1339

Q753A4              	100.00%		B8CAU9              	100.00%
Bootstrap support for Q753A4 as seed ortholog is 100%.
Bootstrap support for B8CAU9 as seed ortholog is 100%.

Group of orthologs #10. Best score 1296 bits
Score difference with first non-orthologous sequence - A.gossypii:1296 T.pseudonana:1296

Q752B8              	100.00%		B8BW81              	100.00%
Bootstrap support for Q752B8 as seed ortholog is 100%.
Bootstrap support for B8BW81 as seed ortholog is 100%.

Group of orthologs #11. Best score 1278 bits
Score difference with first non-orthologous sequence - A.gossypii:1278 T.pseudonana:1278

Q756K2              	100.00%		B8C4M1              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 100%.
Bootstrap support for B8C4M1 as seed ortholog is 100%.

Group of orthologs #12. Best score 1255 bits
Score difference with first non-orthologous sequence - A.gossypii:1255 T.pseudonana:1255

Q756A8              	100.00%		B8C8U9              	100.00%
Bootstrap support for Q756A8 as seed ortholog is 100%.
Bootstrap support for B8C8U9 as seed ortholog is 100%.

Group of orthologs #13. Best score 1233 bits
Score difference with first non-orthologous sequence - A.gossypii:1233 T.pseudonana:1025

Q75B52              	100.00%		B8BQM2              	100.00%
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for B8BQM2 as seed ortholog is 100%.

Group of orthologs #14. Best score 1179 bits
Score difference with first non-orthologous sequence - A.gossypii:1179 T.pseudonana:1179

Q75D82              	100.00%		B8C728              	100.00%
Bootstrap support for Q75D82 as seed ortholog is 100%.
Bootstrap support for B8C728 as seed ortholog is 100%.

Group of orthologs #15. Best score 1127 bits
Score difference with first non-orthologous sequence - A.gossypii:1127 T.pseudonana:1127

Q75DB0              	100.00%		B8BVU8              	100.00%
Bootstrap support for Q75DB0 as seed ortholog is 100%.
Bootstrap support for B8BVU8 as seed ortholog is 100%.

Group of orthologs #16. Best score 1116 bits
Score difference with first non-orthologous sequence - A.gossypii:1116 T.pseudonana:1116

Q75ED6              	100.00%		B8CE42              	100.00%
                    	       		B8LCZ8              	15.10%
                    	       		B8LCZ7              	14.33%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for B8CE42 as seed ortholog is 100%.

Group of orthologs #17. Best score 1087 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.pseudonana:210

Q75AI4              	100.00%		B8C161              	100.00%
Bootstrap support for Q75AI4 as seed ortholog is 100%.
Bootstrap support for B8C161 as seed ortholog is 99%.

Group of orthologs #18. Best score 1054 bits
Score difference with first non-orthologous sequence - A.gossypii:634 T.pseudonana:245

Q754B2              	100.00%		B8BPW0              	100.00%
                    	       		B8C373              	13.87%
Bootstrap support for Q754B2 as seed ortholog is 100%.
Bootstrap support for B8BPW0 as seed ortholog is 100%.

Group of orthologs #19. Best score 1052 bits
Score difference with first non-orthologous sequence - A.gossypii:1052 T.pseudonana:246

Q755V8              	100.00%		B8C9L4              	100.00%
                    	       		B8C9P0              	69.27%
Bootstrap support for Q755V8 as seed ortholog is 100%.
Bootstrap support for B8C9L4 as seed ortholog is 99%.

Group of orthologs #20. Best score 1022 bits
Score difference with first non-orthologous sequence - A.gossypii:1022 T.pseudonana:1022

Q759A3              	100.00%		B8C4Z8              	100.00%
Bootstrap support for Q759A3 as seed ortholog is 100%.
Bootstrap support for B8C4Z8 as seed ortholog is 100%.

Group of orthologs #21. Best score 1020 bits
Score difference with first non-orthologous sequence - A.gossypii:559 T.pseudonana:494

Q754C8              	100.00%		B8C469              	100.00%
Bootstrap support for Q754C8 as seed ortholog is 100%.
Bootstrap support for B8C469 as seed ortholog is 100%.

Group of orthologs #22. Best score 1014 bits
Score difference with first non-orthologous sequence - A.gossypii:1014 T.pseudonana:839

Q755X4              	100.00%		B8C8U0              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 100%.
Bootstrap support for B8C8U0 as seed ortholog is 100%.

Group of orthologs #23. Best score 948 bits
Score difference with first non-orthologous sequence - A.gossypii:948 T.pseudonana:948

Q759E3              	100.00%		B8BYH0              	100.00%
Bootstrap support for Q759E3 as seed ortholog is 100%.
Bootstrap support for B8BYH0 as seed ortholog is 100%.

Group of orthologs #24. Best score 933 bits
Score difference with first non-orthologous sequence - A.gossypii:933 T.pseudonana:695

Q758E3              	100.00%		B8C5Z9              	100.00%
Bootstrap support for Q758E3 as seed ortholog is 100%.
Bootstrap support for B8C5Z9 as seed ortholog is 100%.

Group of orthologs #25. Best score 923 bits
Score difference with first non-orthologous sequence - A.gossypii:923 T.pseudonana:923

Q75DS1              	100.00%		B8CA95              	100.00%
Bootstrap support for Q75DS1 as seed ortholog is 100%.
Bootstrap support for B8CA95 as seed ortholog is 100%.

Group of orthologs #26. Best score 899 bits
Score difference with first non-orthologous sequence - A.gossypii:899 T.pseudonana:899

Q75AP8              	100.00%		B8C129              	100.00%
Bootstrap support for Q75AP8 as seed ortholog is 100%.
Bootstrap support for B8C129 as seed ortholog is 100%.

Group of orthologs #27. Best score 897 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:101

Q756R7              	100.00%		B8C635              	100.00%
Q754F6              	43.80%		
Bootstrap support for Q756R7 as seed ortholog is 99%.
Bootstrap support for B8C635 as seed ortholog is 99%.

Group of orthologs #28. Best score 894 bits
Score difference with first non-orthologous sequence - A.gossypii:894 T.pseudonana:272

Q75EP5              	100.00%		B5YM58              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for B5YM58 as seed ortholog is 99%.

Group of orthologs #29. Best score 881 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.pseudonana:452

Q75EQ9              	100.00%		B8BR58              	100.00%
Bootstrap support for Q75EQ9 as seed ortholog is 100%.
Bootstrap support for B8BR58 as seed ortholog is 100%.

Group of orthologs #30. Best score 870 bits
Score difference with first non-orthologous sequence - A.gossypii:870 T.pseudonana:356

Q8J2M3              	100.00%		B8C637              	100.00%
Bootstrap support for Q8J2M3 as seed ortholog is 100%.
Bootstrap support for B8C637 as seed ortholog is 100%.

Group of orthologs #31. Best score 861 bits
Score difference with first non-orthologous sequence - A.gossypii:590 T.pseudonana:691

Q755K6              	100.00%		B8C5U2              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for B8C5U2 as seed ortholog is 100%.

Group of orthologs #32. Best score 832 bits
Score difference with first non-orthologous sequence - A.gossypii:832 T.pseudonana:832

Q755X5              	100.00%		B8CEP8              	100.00%
Bootstrap support for Q755X5 as seed ortholog is 100%.
Bootstrap support for B8CEP8 as seed ortholog is 100%.

Group of orthologs #33. Best score 831 bits
Score difference with first non-orthologous sequence - A.gossypii:831 T.pseudonana:695

Q75C64              	100.00%		B8CCT7              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for B8CCT7 as seed ortholog is 100%.

Group of orthologs #34. Best score 830 bits
Score difference with first non-orthologous sequence - A.gossypii:830 T.pseudonana:352

Q752Y8              	100.00%		B8BYU7              	100.00%
Bootstrap support for Q752Y8 as seed ortholog is 100%.
Bootstrap support for B8BYU7 as seed ortholog is 100%.

Group of orthologs #35. Best score 827 bits
Score difference with first non-orthologous sequence - A.gossypii:827 T.pseudonana:827

Q74Z60              	100.00%		B8C4V9              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for B8C4V9 as seed ortholog is 100%.

Group of orthologs #36. Best score 817 bits
Score difference with first non-orthologous sequence - A.gossypii:646 T.pseudonana:817

Q74ZM9              	100.00%		B8CEE0              	100.00%
Bootstrap support for Q74ZM9 as seed ortholog is 100%.
Bootstrap support for B8CEE0 as seed ortholog is 100%.

Group of orthologs #37. Best score 812 bits
Score difference with first non-orthologous sequence - A.gossypii:812 T.pseudonana:812

Q759B4              	100.00%		B8LD66              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for B8LD66 as seed ortholog is 100%.

Group of orthologs #38. Best score 810 bits
Score difference with first non-orthologous sequence - A.gossypii:810 T.pseudonana:810

Q75A42              	100.00%		B8C5Y5              	100.00%
Bootstrap support for Q75A42 as seed ortholog is 100%.
Bootstrap support for B8C5Y5 as seed ortholog is 100%.

Group of orthologs #39. Best score 787 bits
Score difference with first non-orthologous sequence - A.gossypii:787 T.pseudonana:787

Q755Z3              	100.00%		B8CBX3              	100.00%
Bootstrap support for Q755Z3 as seed ortholog is 100%.
Bootstrap support for B8CBX3 as seed ortholog is 100%.

Group of orthologs #40. Best score 767 bits
Score difference with first non-orthologous sequence - A.gossypii:767 T.pseudonana:767

Q74ZJ9              	100.00%		B8CA75              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for B8CA75 as seed ortholog is 100%.

Group of orthologs #41. Best score 758 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.pseudonana:306

Q75E97              	100.00%		B8CBV2              	100.00%
Bootstrap support for Q75E97 as seed ortholog is 100%.
Bootstrap support for B8CBV2 as seed ortholog is 100%.

Group of orthologs #42. Best score 755 bits
Score difference with first non-orthologous sequence - A.gossypii:755 T.pseudonana:755

Q755D6              	100.00%		B8BZQ9              	100.00%
Bootstrap support for Q755D6 as seed ortholog is 100%.
Bootstrap support for B8BZQ9 as seed ortholog is 100%.

Group of orthologs #43. Best score 744 bits
Score difference with first non-orthologous sequence - A.gossypii:744 T.pseudonana:744

Q753S2              	100.00%		B8BSS2              	100.00%
Bootstrap support for Q753S2 as seed ortholog is 100%.
Bootstrap support for B8BSS2 as seed ortholog is 100%.

Group of orthologs #44. Best score 741 bits
Score difference with first non-orthologous sequence - A.gossypii:741 T.pseudonana:741

Q752K1              	100.00%		B8CE77              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for B8CE77 as seed ortholog is 100%.

Group of orthologs #45. Best score 734 bits
Score difference with first non-orthologous sequence - A.gossypii:734 T.pseudonana:734

Q74Z48              	100.00%		B5YN79              	100.00%
Bootstrap support for Q74Z48 as seed ortholog is 100%.
Bootstrap support for B5YN79 as seed ortholog is 100%.

Group of orthologs #46. Best score 727 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.pseudonana:510

Q75EV6              	100.00%		B8C1A4              	100.00%
Bootstrap support for Q75EV6 as seed ortholog is 98%.
Bootstrap support for B8C1A4 as seed ortholog is 100%.

Group of orthologs #47. Best score 723 bits
Score difference with first non-orthologous sequence - A.gossypii:427 T.pseudonana:723

Q74ZH1              	100.00%		B8BQT7              	100.00%
Bootstrap support for Q74ZH1 as seed ortholog is 100%.
Bootstrap support for B8BQT7 as seed ortholog is 100%.

Group of orthologs #48. Best score 723 bits
Score difference with first non-orthologous sequence - A.gossypii:723 T.pseudonana:723

Q75F16              	100.00%		B8BYD7              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for B8BYD7 as seed ortholog is 100%.

Group of orthologs #49. Best score 721 bits
Score difference with first non-orthologous sequence - A.gossypii:721 T.pseudonana:500

Q74ZT4              	100.00%		B8C2D9              	100.00%
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for B8C2D9 as seed ortholog is 100%.

Group of orthologs #50. Best score 711 bits
Score difference with first non-orthologous sequence - A.gossypii:711 T.pseudonana:593

Q75BE4              	100.00%		B8C0L1              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for B8C0L1 as seed ortholog is 100%.

Group of orthologs #51. Best score 701 bits
Score difference with first non-orthologous sequence - A.gossypii:489 T.pseudonana:701

Q74ZW9              	100.00%		B8CCA2              	100.00%
Bootstrap support for Q74ZW9 as seed ortholog is 100%.
Bootstrap support for B8CCA2 as seed ortholog is 100%.

Group of orthologs #52. Best score 699 bits
Score difference with first non-orthologous sequence - A.gossypii:699 T.pseudonana:15

Q758I5              	100.00%		B8C7Q0              	100.00%
                    	       		B8CFD1              	41.59%
Bootstrap support for Q758I5 as seed ortholog is 100%.
Bootstrap support for B8C7Q0 as seed ortholog is 65%.
Alternative seed ortholog is B5YLI2 (15 bits away from this cluster)

Group of orthologs #53. Best score 696 bits
Score difference with first non-orthologous sequence - A.gossypii:696 T.pseudonana:696

Q755E1              	100.00%		B8C0Z9              	100.00%
Bootstrap support for Q755E1 as seed ortholog is 100%.
Bootstrap support for B8C0Z9 as seed ortholog is 100%.

Group of orthologs #54. Best score 696 bits
Score difference with first non-orthologous sequence - A.gossypii:696 T.pseudonana:596

Q9UVJ8              	100.00%		B8CBV3              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for B8CBV3 as seed ortholog is 100%.

Group of orthologs #55. Best score 695 bits
Score difference with first non-orthologous sequence - A.gossypii:367 T.pseudonana:311

Q75CF8              	100.00%		B8C316              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 100%.
Bootstrap support for B8C316 as seed ortholog is 100%.

Group of orthologs #56. Best score 693 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:319

Q752N7              	100.00%		B8C4D6              	100.00%
Q754V7              	24.98%		B8BXR2              	13.36%
Bootstrap support for Q752N7 as seed ortholog is 99%.
Bootstrap support for B8C4D6 as seed ortholog is 100%.

Group of orthologs #57. Best score 693 bits
Score difference with first non-orthologous sequence - A.gossypii:693 T.pseudonana:693

Q753N2              	100.00%		B8C0Y9              	100.00%
Bootstrap support for Q753N2 as seed ortholog is 100%.
Bootstrap support for B8C0Y9 as seed ortholog is 100%.

Group of orthologs #58. Best score 692 bits
Score difference with first non-orthologous sequence - A.gossypii:692 T.pseudonana:428

Q757E6              	100.00%		B8BS27              	100.00%
Bootstrap support for Q757E6 as seed ortholog is 100%.
Bootstrap support for B8BS27 as seed ortholog is 100%.

Group of orthologs #59. Best score 691 bits
Score difference with first non-orthologous sequence - A.gossypii:691 T.pseudonana:691

Q75CP0              	100.00%		B8BY90              	100.00%
Q756S6              	38.05%		
Bootstrap support for Q75CP0 as seed ortholog is 100%.
Bootstrap support for B8BY90 as seed ortholog is 100%.

Group of orthologs #60. Best score 685 bits
Score difference with first non-orthologous sequence - A.gossypii:685 T.pseudonana:59

Q75D54              	100.00%		B5YP88              	100.00%
Bootstrap support for Q75D54 as seed ortholog is 100%.
Bootstrap support for B5YP88 as seed ortholog is 95%.

Group of orthologs #61. Best score 677 bits
Score difference with first non-orthologous sequence - A.gossypii:384 T.pseudonana:222

Q758Q4              	100.00%		B8C0A7              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 100%.
Bootstrap support for B8C0A7 as seed ortholog is 99%.

Group of orthologs #62. Best score 676 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:19

Q750B0              	100.00%		B8C0F8              	100.00%
Bootstrap support for Q750B0 as seed ortholog is 76%.
Bootstrap support for B8C0F8 as seed ortholog is 62%.
Alternative seed ortholog is B5YNM5 (19 bits away from this cluster)

Group of orthologs #63. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:675 T.pseudonana:84

Q750I7              	100.00%		B8BXB9              	100.00%
Bootstrap support for Q750I7 as seed ortholog is 100%.
Bootstrap support for B8BXB9 as seed ortholog is 94%.

Group of orthologs #64. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:675 T.pseudonana:675

Q75CN6              	100.00%		B8C011              	100.00%
Bootstrap support for Q75CN6 as seed ortholog is 100%.
Bootstrap support for B8C011 as seed ortholog is 100%.

Group of orthologs #65. Best score 674 bits
Score difference with first non-orthologous sequence - A.gossypii:674 T.pseudonana:674

Q752T8              	100.00%		B8CEN4              	100.00%
Bootstrap support for Q752T8 as seed ortholog is 100%.
Bootstrap support for B8CEN4 as seed ortholog is 100%.

Group of orthologs #66. Best score 668 bits
Score difference with first non-orthologous sequence - A.gossypii:668 T.pseudonana:668

Q752Y2              	100.00%		B8C832              	100.00%
Bootstrap support for Q752Y2 as seed ortholog is 100%.
Bootstrap support for B8C832 as seed ortholog is 100%.

Group of orthologs #67. Best score 667 bits
Score difference with first non-orthologous sequence - A.gossypii:320 T.pseudonana:667

Q754Q9              	100.00%		B8C600              	100.00%
Bootstrap support for Q754Q9 as seed ortholog is 100%.
Bootstrap support for B8C600 as seed ortholog is 100%.

Group of orthologs #68. Best score 666 bits
Score difference with first non-orthologous sequence - A.gossypii:666 T.pseudonana:666

Q75BP6              	100.00%		B8C8B4              	100.00%
                    	       		B8BRR6              	37.70%
Bootstrap support for Q75BP6 as seed ortholog is 100%.
Bootstrap support for B8C8B4 as seed ortholog is 100%.

Group of orthologs #69. Best score 657 bits
Score difference with first non-orthologous sequence - A.gossypii:657 T.pseudonana:554

Q750T7              	100.00%		B8BZT4              	100.00%
Q758X0              	14.56%		B8C359              	18.13%
Bootstrap support for Q750T7 as seed ortholog is 100%.
Bootstrap support for B8BZT4 as seed ortholog is 100%.

Group of orthologs #70. Best score 652 bits
Score difference with first non-orthologous sequence - A.gossypii:652 T.pseudonana:80

Q751L7              	100.00%		B5YN22              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for B5YN22 as seed ortholog is 95%.

Group of orthologs #71. Best score 651 bits
Score difference with first non-orthologous sequence - A.gossypii:651 T.pseudonana:651

Q753Z4              	100.00%		B8CC29              	100.00%
Bootstrap support for Q753Z4 as seed ortholog is 100%.
Bootstrap support for B8CC29 as seed ortholog is 100%.

Group of orthologs #72. Best score 643 bits
Score difference with first non-orthologous sequence - A.gossypii:562 T.pseudonana:564

Q74ZS3              	100.00%		B8LE79              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for B8LE79 as seed ortholog is 100%.

Group of orthologs #73. Best score 639 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.pseudonana:300

Q75D00              	100.00%		B8CFV4              	100.00%
Bootstrap support for Q75D00 as seed ortholog is 100%.
Bootstrap support for B8CFV4 as seed ortholog is 100%.

Group of orthologs #74. Best score 634 bits
Score difference with first non-orthologous sequence - A.gossypii:634 T.pseudonana:563

Q753A6              	100.00%		B8C5R2              	100.00%
Bootstrap support for Q753A6 as seed ortholog is 100%.
Bootstrap support for B8C5R2 as seed ortholog is 100%.

Group of orthologs #75. Best score 632 bits
Score difference with first non-orthologous sequence - A.gossypii:632 T.pseudonana:632

Q75C45              	100.00%		B8C241              	100.00%
Bootstrap support for Q75C45 as seed ortholog is 100%.
Bootstrap support for B8C241 as seed ortholog is 100%.

Group of orthologs #76. Best score 630 bits
Score difference with first non-orthologous sequence - A.gossypii:630 T.pseudonana:553

Q755V3              	100.00%		B8C0D6              	100.00%
Bootstrap support for Q755V3 as seed ortholog is 100%.
Bootstrap support for B8C0D6 as seed ortholog is 100%.

Group of orthologs #77. Best score 630 bits
Score difference with first non-orthologous sequence - A.gossypii:630 T.pseudonana:630

Q75EU2              	100.00%		B8C572              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for B8C572 as seed ortholog is 100%.

Group of orthologs #78. Best score 627 bits
Score difference with first non-orthologous sequence - A.gossypii:627 T.pseudonana:370

Q752M8              	100.00%		B8BT64              	100.00%
Bootstrap support for Q752M8 as seed ortholog is 100%.
Bootstrap support for B8BT64 as seed ortholog is 100%.

Group of orthologs #79. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 T.pseudonana:626

Q74Z89              	100.00%		B8BRD0              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 100%.
Bootstrap support for B8BRD0 as seed ortholog is 100%.

Group of orthologs #80. Best score 623 bits
Score difference with first non-orthologous sequence - A.gossypii:623 T.pseudonana:125

Q754B5              	100.00%		B5YLQ5              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for B5YLQ5 as seed ortholog is 99%.

Group of orthologs #81. Best score 622 bits
Score difference with first non-orthologous sequence - A.gossypii:419 T.pseudonana:387

Q74Z73              	100.00%		B8BY61              	100.00%
Bootstrap support for Q74Z73 as seed ortholog is 100%.
Bootstrap support for B8BY61 as seed ortholog is 100%.

Group of orthologs #82. Best score 617 bits
Score difference with first non-orthologous sequence - A.gossypii:525 T.pseudonana:617

Q758M7              	100.00%		B8BZ96              	100.00%
Bootstrap support for Q758M7 as seed ortholog is 100%.
Bootstrap support for B8BZ96 as seed ortholog is 100%.

Group of orthologs #83. Best score 615 bits
Score difference with first non-orthologous sequence - A.gossypii:615 T.pseudonana:225

Q75DQ8              	100.00%		B5YMP7              	100.00%
Q75EQ4              	9.50%		
Bootstrap support for Q75DQ8 as seed ortholog is 100%.
Bootstrap support for B5YMP7 as seed ortholog is 100%.

Group of orthologs #84. Best score 613 bits
Score difference with first non-orthologous sequence - A.gossypii:613 T.pseudonana:174

Q75BD2              	100.00%		B8BQU3              	100.00%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for B8BQU3 as seed ortholog is 99%.

Group of orthologs #85. Best score 610 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.pseudonana:50

Q753R1              	100.00%		A0T0X1              	100.00%
Bootstrap support for Q753R1 as seed ortholog is 99%.
Bootstrap support for A0T0X1 as seed ortholog is 86%.

Group of orthologs #86. Best score 608 bits
Score difference with first non-orthologous sequence - A.gossypii:608 T.pseudonana:608

Q750R1              	100.00%		B8CAJ4              	100.00%
Bootstrap support for Q750R1 as seed ortholog is 100%.
Bootstrap support for B8CAJ4 as seed ortholog is 100%.

Group of orthologs #87. Best score 607 bits
Score difference with first non-orthologous sequence - A.gossypii:607 T.pseudonana:484

Q759A4              	100.00%		B8BV18              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 100%.
Bootstrap support for B8BV18 as seed ortholog is 100%.

Group of orthologs #88. Best score 600 bits
Score difference with first non-orthologous sequence - A.gossypii:600 T.pseudonana:388

Q75AE3              	100.00%		B8C649              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 100%.
Bootstrap support for B8C649 as seed ortholog is 100%.

Group of orthologs #89. Best score 599 bits
Score difference with first non-orthologous sequence - A.gossypii:599 T.pseudonana:599

Q75EM2              	100.00%		B8BV99              	100.00%
Bootstrap support for Q75EM2 as seed ortholog is 100%.
Bootstrap support for B8BV99 as seed ortholog is 100%.

Group of orthologs #90. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:356 T.pseudonana:205

P41752              	100.00%		B8BW58              	100.00%
                    	       		B8LEI9              	5.32%
Bootstrap support for P41752 as seed ortholog is 100%.
Bootstrap support for B8BW58 as seed ortholog is 100%.

Group of orthologs #91. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:598 T.pseudonana:510

Q754K5              	100.00%		B8C5G9              	100.00%
Bootstrap support for Q754K5 as seed ortholog is 100%.
Bootstrap support for B8C5G9 as seed ortholog is 100%.

Group of orthologs #92. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:596 T.pseudonana:439

Q757M5              	100.00%		B8BR56              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 100%.
Bootstrap support for B8BR56 as seed ortholog is 100%.

Group of orthologs #93. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:596 T.pseudonana:596

Q756B7              	100.00%		B8C1B3              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for B8C1B3 as seed ortholog is 100%.

Group of orthologs #94. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:255 T.pseudonana:174

Q753Y4              	100.00%		B8CDA1              	100.00%
Bootstrap support for Q753Y4 as seed ortholog is 100%.
Bootstrap support for B8CDA1 as seed ortholog is 99%.

Group of orthologs #95. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:596 T.pseudonana:423

Q75C66              	100.00%		B8CCP1              	100.00%
Bootstrap support for Q75C66 as seed ortholog is 100%.
Bootstrap support for B8CCP1 as seed ortholog is 100%.

Group of orthologs #96. Best score 593 bits
Score difference with first non-orthologous sequence - A.gossypii:593 T.pseudonana:593

Q755Y6              	100.00%		B8LEG9              	100.00%
Bootstrap support for Q755Y6 as seed ortholog is 100%.
Bootstrap support for B8LEG9 as seed ortholog is 100%.

Group of orthologs #97. Best score 591 bits
Score difference with first non-orthologous sequence - A.gossypii:591 T.pseudonana:591

Q755G5              	100.00%		B8BXV8              	100.00%
Bootstrap support for Q755G5 as seed ortholog is 100%.
Bootstrap support for B8BXV8 as seed ortholog is 100%.

Group of orthologs #98. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:586 T.pseudonana:586

Q75D48              	100.00%		B5YNZ5              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for B5YNZ5 as seed ortholog is 100%.

Group of orthologs #99. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:586 T.pseudonana:525

Q751B1              	100.00%		B8CCE4              	100.00%
Bootstrap support for Q751B1 as seed ortholog is 100%.
Bootstrap support for B8CCE4 as seed ortholog is 100%.

Group of orthologs #100. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:586 T.pseudonana:191

Q758L0              	100.00%		B8LDA5              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for B8LDA5 as seed ortholog is 100%.

Group of orthologs #101. Best score 579 bits
Score difference with first non-orthologous sequence - A.gossypii:579 T.pseudonana:439

Q751F3              	100.00%		B8BR87              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 100%.
Bootstrap support for B8BR87 as seed ortholog is 100%.

Group of orthologs #102. Best score 576 bits
Score difference with first non-orthologous sequence - A.gossypii:341 T.pseudonana:232

Q750C0              	100.00%		B8C7D6              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 100%.
Bootstrap support for B8C7D6 as seed ortholog is 100%.

Group of orthologs #103. Best score 570 bits
Score difference with first non-orthologous sequence - A.gossypii:453 T.pseudonana:363

Q75BS4              	100.00%		B8BVK5              	100.00%
Bootstrap support for Q75BS4 as seed ortholog is 100%.
Bootstrap support for B8BVK5 as seed ortholog is 100%.

Group of orthologs #104. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:566 T.pseudonana:472

Q751H8              	100.00%		A0T0P4              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for A0T0P4 as seed ortholog is 100%.

Group of orthologs #105. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:566 T.pseudonana:364

Q75A77              	100.00%		B8C2X2              	100.00%
Bootstrap support for Q75A77 as seed ortholog is 100%.
Bootstrap support for B8C2X2 as seed ortholog is 100%.

Group of orthologs #106. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:566 T.pseudonana:505

Q750R3              	100.00%		B8CE84              	100.00%
Bootstrap support for Q750R3 as seed ortholog is 100%.
Bootstrap support for B8CE84 as seed ortholog is 100%.

Group of orthologs #107. Best score 565 bits
Score difference with first non-orthologous sequence - A.gossypii:15 T.pseudonana:565

Q75F90              	100.00%		B5YMC0              	100.00%
Bootstrap support for Q75F90 as seed ortholog is 59%.
Alternative seed ortholog is Q75DL8 (15 bits away from this cluster)
Bootstrap support for B5YMC0 as seed ortholog is 100%.

Group of orthologs #108. Best score 565 bits
Score difference with first non-orthologous sequence - A.gossypii:565 T.pseudonana:565

Q75CE3              	100.00%		B8C935              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for B8C935 as seed ortholog is 100%.

Group of orthologs #109. Best score 561 bits
Score difference with first non-orthologous sequence - A.gossypii:505 T.pseudonana:392

Q750J4              	100.00%		B8BTH7              	100.00%
Bootstrap support for Q750J4 as seed ortholog is 100%.
Bootstrap support for B8BTH7 as seed ortholog is 100%.

Group of orthologs #110. Best score 561 bits
Score difference with first non-orthologous sequence - A.gossypii:561 T.pseudonana:118

Q75BQ6              	100.00%		B5YLQ7              	100.00%
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for B5YLQ7 as seed ortholog is 99%.

Group of orthologs #111. Best score 558 bits
Score difference with first non-orthologous sequence - A.gossypii:558 T.pseudonana:558

Q759E6              	100.00%		B8CBK6              	100.00%
Bootstrap support for Q759E6 as seed ortholog is 100%.
Bootstrap support for B8CBK6 as seed ortholog is 100%.

Group of orthologs #112. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 T.pseudonana:318

Q75BD7              	100.00%		B8BS17              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for B8BS17 as seed ortholog is 100%.

Group of orthologs #113. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:209 T.pseudonana:431

Q759C7              	100.00%		B8BR31              	100.00%
Q74ZS8              	8.51%		
Bootstrap support for Q759C7 as seed ortholog is 99%.
Bootstrap support for B8BR31 as seed ortholog is 100%.

Group of orthologs #114. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 T.pseudonana:555

Q753V9              	100.00%		B8C300              	100.00%
Bootstrap support for Q753V9 as seed ortholog is 100%.
Bootstrap support for B8C300 as seed ortholog is 100%.

Group of orthologs #115. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.pseudonana:312

Q753G0              	100.00%		B5YNZ0              	100.00%
Bootstrap support for Q753G0 as seed ortholog is 100%.
Bootstrap support for B5YNZ0 as seed ortholog is 100%.

Group of orthologs #116. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 T.pseudonana:554

Q757I5              	100.00%		B8BZ85              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for B8BZ85 as seed ortholog is 100%.

Group of orthologs #117. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:551 T.pseudonana:551

Q75DY5              	100.00%		B8C072              	100.00%
Bootstrap support for Q75DY5 as seed ortholog is 100%.
Bootstrap support for B8C072 as seed ortholog is 100%.

Group of orthologs #118. Best score 549 bits
Score difference with first non-orthologous sequence - A.gossypii:381 T.pseudonana:130

Q755N4              	100.00%		B8CDF5              	100.00%
Bootstrap support for Q755N4 as seed ortholog is 100%.
Bootstrap support for B8CDF5 as seed ortholog is 99%.

Group of orthologs #119. Best score 548 bits
Score difference with first non-orthologous sequence - A.gossypii:548 T.pseudonana:303

Q74ZC3              	100.00%		B8BRW4              	100.00%
Bootstrap support for Q74ZC3 as seed ortholog is 100%.
Bootstrap support for B8BRW4 as seed ortholog is 100%.

Group of orthologs #120. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:434 T.pseudonana:359

Q759L6              	100.00%		B8LBP2              	100.00%
Bootstrap support for Q759L6 as seed ortholog is 100%.
Bootstrap support for B8LBP2 as seed ortholog is 100%.

Group of orthologs #121. Best score 541 bits
Score difference with first non-orthologous sequence - A.gossypii:541 T.pseudonana:296

Q753F9              	100.00%		B8C546              	100.00%
Bootstrap support for Q753F9 as seed ortholog is 100%.
Bootstrap support for B8C546 as seed ortholog is 100%.

Group of orthologs #122. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 T.pseudonana:539

Q74ZK6              	100.00%		B8BWA6              	100.00%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for B8BWA6 as seed ortholog is 100%.

Group of orthologs #123. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 T.pseudonana:215

Q757N3              	100.00%		B8LCI1              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for B8LCI1 as seed ortholog is 99%.

Group of orthologs #124. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 T.pseudonana:455

Q75A36              	100.00%		B8C8Q4              	100.00%
Bootstrap support for Q75A36 as seed ortholog is 100%.
Bootstrap support for B8C8Q4 as seed ortholog is 100%.

Group of orthologs #125. Best score 528 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:58

Q754A6              	100.00%		B8BX38              	100.00%
Bootstrap support for Q754A6 as seed ortholog is 100%.
Bootstrap support for B8BX38 as seed ortholog is 98%.

Group of orthologs #126. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.pseudonana:31

Q75CZ5              	100.00%		B8LBM6              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 100%.
Bootstrap support for B8LBM6 as seed ortholog is 76%.

Group of orthologs #127. Best score 526 bits
Score difference with first non-orthologous sequence - A.gossypii:526 T.pseudonana:19

Q75ED8              	100.00%		B8CA96              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for B8CA96 as seed ortholog is 68%.
Alternative seed ortholog is A0T100 (19 bits away from this cluster)

Group of orthologs #128. Best score 524 bits
Score difference with first non-orthologous sequence - A.gossypii:524 T.pseudonana:350

Q75F41              	100.00%		B8C9V9              	100.00%
Bootstrap support for Q75F41 as seed ortholog is 100%.
Bootstrap support for B8C9V9 as seed ortholog is 100%.

Group of orthologs #129. Best score 522 bits
Score difference with first non-orthologous sequence - A.gossypii:522 T.pseudonana:354

Q756K0              	100.00%		B8C5K0              	100.00%
Bootstrap support for Q756K0 as seed ortholog is 100%.
Bootstrap support for B8C5K0 as seed ortholog is 100%.

Group of orthologs #130. Best score 522 bits
Score difference with first non-orthologous sequence - A.gossypii:522 T.pseudonana:291

Q752R1              	100.00%		B8LBI2              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for B8LBI2 as seed ortholog is 100%.

Group of orthologs #131. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:333 T.pseudonana:519

Q750H4              	100.00%		B5YMT5              	100.00%
Bootstrap support for Q750H4 as seed ortholog is 100%.
Bootstrap support for B5YMT5 as seed ortholog is 100%.

Group of orthologs #132. Best score 518 bits
Score difference with first non-orthologous sequence - A.gossypii:518 T.pseudonana:360

Q753C2              	100.00%		B8CAA1              	100.00%
Bootstrap support for Q753C2 as seed ortholog is 100%.
Bootstrap support for B8CAA1 as seed ortholog is 100%.

Group of orthologs #133. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:517 T.pseudonana:517

Q752D6              	100.00%		B8BR45              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for B8BR45 as seed ortholog is 100%.

Group of orthologs #134. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.pseudonana:2

Q74Z12              	100.00%		B8C5S2              	100.00%
Bootstrap support for Q74Z12 as seed ortholog is 99%.
Bootstrap support for B8C5S2 as seed ortholog is 49%.
Alternative seed ortholog is B8BW26 (2 bits away from this cluster)

Group of orthologs #135. Best score 516 bits
Score difference with first non-orthologous sequence - A.gossypii:516 T.pseudonana:516

Q758Z0              	100.00%		B8BXN8              	100.00%
Bootstrap support for Q758Z0 as seed ortholog is 100%.
Bootstrap support for B8BXN8 as seed ortholog is 100%.

Group of orthologs #136. Best score 514 bits
Score difference with first non-orthologous sequence - A.gossypii:514 T.pseudonana:514

Q756A7              	100.00%		B8C213              	100.00%
Bootstrap support for Q756A7 as seed ortholog is 100%.
Bootstrap support for B8C213 as seed ortholog is 100%.

Group of orthologs #137. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:512 T.pseudonana:137

Q75E20              	100.00%		B8CG63              	100.00%
Bootstrap support for Q75E20 as seed ortholog is 100%.
Bootstrap support for B8CG63 as seed ortholog is 99%.

Group of orthologs #138. Best score 510 bits
Score difference with first non-orthologous sequence - A.gossypii:510 T.pseudonana:510

Q75DC5              	100.00%		B8CG69              	100.00%
Bootstrap support for Q75DC5 as seed ortholog is 100%.
Bootstrap support for B8CG69 as seed ortholog is 100%.

Group of orthologs #139. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:288 T.pseudonana:508

Q752H7              	100.00%		B5YLQ8              	100.00%
                    	       		B8C4D0              	29.23%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for B5YLQ8 as seed ortholog is 100%.

Group of orthologs #140. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:508

O94198              	100.00%		B5YMH1              	100.00%
Bootstrap support for O94198 as seed ortholog is 99%.
Bootstrap support for B5YMH1 as seed ortholog is 100%.

Group of orthologs #141. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:508 T.pseudonana:295

O60028              	100.00%		B8BTI1              	100.00%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for B8BTI1 as seed ortholog is 100%.

Group of orthologs #142. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:508 T.pseudonana:508

Q759R7              	100.00%		B5YMS4              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for B5YMS4 as seed ortholog is 100%.

Group of orthologs #143. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:508 T.pseudonana:508

Q75DM3              	100.00%		B8LE99              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for B8LE99 as seed ortholog is 100%.

Group of orthologs #144. Best score 507 bits
Score difference with first non-orthologous sequence - A.gossypii:507 T.pseudonana:507

Q753K9              	100.00%		B8BZR9              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 100%.
Bootstrap support for B8BZR9 as seed ortholog is 100%.

Group of orthologs #145. Best score 506 bits
Score difference with first non-orthologous sequence - A.gossypii:344 T.pseudonana:337

Q756T4              	100.00%		B8BY63              	100.00%
Bootstrap support for Q756T4 as seed ortholog is 100%.
Bootstrap support for B8BY63 as seed ortholog is 100%.

Group of orthologs #146. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 T.pseudonana:239

Q753P8              	100.00%		B8CBE9              	100.00%
Bootstrap support for Q753P8 as seed ortholog is 100%.
Bootstrap support for B8CBE9 as seed ortholog is 100%.

Group of orthologs #147. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:364 T.pseudonana:153

Q74ZG2              	100.00%		B8BYH3              	100.00%
Bootstrap support for Q74ZG2 as seed ortholog is 100%.
Bootstrap support for B8BYH3 as seed ortholog is 99%.

Group of orthologs #148. Best score 497 bits
Score difference with first non-orthologous sequence - A.gossypii:273 T.pseudonana:95

Q753U3              	100.00%		B8BS66              	100.00%
                    	       		B8CG79              	7.85%
Bootstrap support for Q753U3 as seed ortholog is 100%.
Bootstrap support for B8BS66 as seed ortholog is 96%.

Group of orthologs #149. Best score 495 bits
Score difference with first non-orthologous sequence - A.gossypii:346 T.pseudonana:282

Q757P3              	100.00%		B8BXC2              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for B8BXC2 as seed ortholog is 100%.

Group of orthologs #150. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:33

Q75A21              	100.00%		B8BRD3              	100.00%
Bootstrap support for Q75A21 as seed ortholog is 99%.
Bootstrap support for B8BRD3 as seed ortholog is 88%.

Group of orthologs #151. Best score 491 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.pseudonana:491

Q75ES5              	100.00%		B8CEG2              	100.00%
Bootstrap support for Q75ES5 as seed ortholog is 99%.
Bootstrap support for B8CEG2 as seed ortholog is 100%.

Group of orthologs #152. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:490 T.pseudonana:490

Q756H2              	100.00%		B8BZT5              	100.00%
                    	       		B8C355              	27.59%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for B8BZT5 as seed ortholog is 100%.

Group of orthologs #153. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:232 T.pseudonana:238

Q757S7              	100.00%		B8BQH0              	100.00%
Bootstrap support for Q757S7 as seed ortholog is 100%.
Bootstrap support for B8BQH0 as seed ortholog is 99%.

Group of orthologs #154. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:488 T.pseudonana:119

Q759C3              	100.00%		B8LBM5              	100.00%
Bootstrap support for Q759C3 as seed ortholog is 100%.
Bootstrap support for B8LBM5 as seed ortholog is 97%.

Group of orthologs #155. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.pseudonana:485

Q75F55              	100.00%		B5YLN3              	100.00%
Bootstrap support for Q75F55 as seed ortholog is 98%.
Bootstrap support for B5YLN3 as seed ortholog is 100%.

Group of orthologs #156. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:484 T.pseudonana:119

Q751I0              	100.00%		B8LEX1              	100.00%
Bootstrap support for Q751I0 as seed ortholog is 100%.
Bootstrap support for B8LEX1 as seed ortholog is 99%.

Group of orthologs #157. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 T.pseudonana:483

Q75EA4              	100.00%		B5YMK8              	100.00%
Bootstrap support for Q75EA4 as seed ortholog is 100%.
Bootstrap support for B5YMK8 as seed ortholog is 100%.

Group of orthologs #158. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 T.pseudonana:483

Q75CS4              	100.00%		B8BW47              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for B8BW47 as seed ortholog is 100%.

Group of orthologs #159. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 T.pseudonana:483

Q75CF3              	100.00%		B8LBP1              	100.00%
Bootstrap support for Q75CF3 as seed ortholog is 100%.
Bootstrap support for B8LBP1 as seed ortholog is 100%.

Group of orthologs #160. Best score 481 bits
Score difference with first non-orthologous sequence - A.gossypii:481 T.pseudonana:117

Q751N2              	100.00%		B8LCY1              	100.00%
                    	       		B8C8K6              	48.77%
Bootstrap support for Q751N2 as seed ortholog is 100%.
Bootstrap support for B8LCY1 as seed ortholog is 99%.

Group of orthologs #161. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:347 T.pseudonana:275

Q755W0              	100.00%		B8BW92              	100.00%
Bootstrap support for Q755W0 as seed ortholog is 100%.
Bootstrap support for B8BW92 as seed ortholog is 100%.

Group of orthologs #162. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 T.pseudonana:401

Q752D9              	100.00%		B8CAM3              	100.00%
Bootstrap support for Q752D9 as seed ortholog is 100%.
Bootstrap support for B8CAM3 as seed ortholog is 100%.

Group of orthologs #163. Best score 476 bits
Score difference with first non-orthologous sequence - A.gossypii:331 T.pseudonana:263

Q75BL8              	100.00%		B8CC33              	100.00%
Bootstrap support for Q75BL8 as seed ortholog is 100%.
Bootstrap support for B8CC33 as seed ortholog is 100%.

Group of orthologs #164. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:471 T.pseudonana:471

Q753T3              	100.00%		B8C553              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for B8C553 as seed ortholog is 100%.

Group of orthologs #165. Best score 470 bits
Score difference with first non-orthologous sequence - A.gossypii:470 T.pseudonana:470

Q754W3              	100.00%		B8LDL7              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for B8LDL7 as seed ortholog is 100%.

Group of orthologs #166. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 T.pseudonana:468

Q757L9              	100.00%		B8C6D4              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for B8C6D4 as seed ortholog is 100%.

Group of orthologs #167. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 T.pseudonana:468

Q75BK3              	100.00%		B8C648              	100.00%
Bootstrap support for Q75BK3 as seed ortholog is 100%.
Bootstrap support for B8C648 as seed ortholog is 100%.

Group of orthologs #168. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 T.pseudonana:88

Q757P4              	100.00%		B8CB70              	100.00%
Bootstrap support for Q757P4 as seed ortholog is 100%.
Bootstrap support for B8CB70 as seed ortholog is 96%.

Group of orthologs #169. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 T.pseudonana:465

Q753N9              	100.00%		B8LEN1              	100.00%
Bootstrap support for Q753N9 as seed ortholog is 100%.
Bootstrap support for B8LEN1 as seed ortholog is 100%.

Group of orthologs #170. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:462 T.pseudonana:462

Q75CR3              	100.00%		B8BS21              	100.00%
Bootstrap support for Q75CR3 as seed ortholog is 100%.
Bootstrap support for B8BS21 as seed ortholog is 100%.

Group of orthologs #171. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:162

Q754T2              	100.00%		B8CBH1              	100.00%
Bootstrap support for Q754T2 as seed ortholog is 98%.
Bootstrap support for B8CBH1 as seed ortholog is 99%.

Group of orthologs #172. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 T.pseudonana:457

Q75DP6              	100.00%		B8C140              	100.00%
                    	       		B8C7E9              	9.97%
Bootstrap support for Q75DP6 as seed ortholog is 100%.
Bootstrap support for B8C140 as seed ortholog is 100%.

Group of orthologs #173. Best score 456 bits
Score difference with first non-orthologous sequence - A.gossypii:231 T.pseudonana:211

Q750N5              	100.00%		B5YNT7              	100.00%
Bootstrap support for Q750N5 as seed ortholog is 100%.
Bootstrap support for B5YNT7 as seed ortholog is 99%.

Group of orthologs #174. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 T.pseudonana:455

Q751N1              	100.00%		B8BQH3              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for B8BQH3 as seed ortholog is 100%.

Group of orthologs #175. Best score 453 bits
Score difference with first non-orthologous sequence - A.gossypii:453 T.pseudonana:453

Q74ZC0              	100.00%		B8BY97              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for B8BY97 as seed ortholog is 100%.

Group of orthologs #176. Best score 453 bits
Score difference with first non-orthologous sequence - A.gossypii:453 T.pseudonana:453

Q75BQ2              	100.00%		B8BYM8              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for B8BYM8 as seed ortholog is 100%.

Group of orthologs #177. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:451 T.pseudonana:47

Q751Y3              	100.00%		B8BY56              	100.00%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for B8BY56 as seed ortholog is 87%.

Group of orthologs #178. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:143

Q755B6              	100.00%		B8CG56              	100.00%
Bootstrap support for Q755B6 as seed ortholog is 99%.
Bootstrap support for B8CG56 as seed ortholog is 100%.

Group of orthologs #179. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:449 T.pseudonana:277

Q75BN9              	100.00%		B8CA45              	100.00%
Bootstrap support for Q75BN9 as seed ortholog is 100%.
Bootstrap support for B8CA45 as seed ortholog is 100%.

Group of orthologs #180. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:448 T.pseudonana:448

Q750Y5              	100.00%		B8C5W2              	100.00%
Bootstrap support for Q750Y5 as seed ortholog is 100%.
Bootstrap support for B8C5W2 as seed ortholog is 100%.

Group of orthologs #181. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 T.pseudonana:445

Q75DI2              	100.00%		B8C8U3              	100.00%
Bootstrap support for Q75DI2 as seed ortholog is 100%.
Bootstrap support for B8C8U3 as seed ortholog is 100%.

Group of orthologs #182. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:444 T.pseudonana:444

Q759U6              	100.00%		B8C2N9              	100.00%
Q759Z6              	24.60%		
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for B8C2N9 as seed ortholog is 100%.

Group of orthologs #183. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 T.pseudonana:443

Q751B3              	100.00%		B8BZX1              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for B8BZX1 as seed ortholog is 100%.

Group of orthologs #184. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 T.pseudonana:68

Q75DF8              	100.00%		B8C631              	100.00%
Bootstrap support for Q75DF8 as seed ortholog is 100%.
Bootstrap support for B8C631 as seed ortholog is 98%.

Group of orthologs #185. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:280 T.pseudonana:94

Q75B50              	100.00%		B8C8H3              	100.00%
Bootstrap support for Q75B50 as seed ortholog is 100%.
Bootstrap support for B8C8H3 as seed ortholog is 99%.

Group of orthologs #186. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 T.pseudonana:214

Q758U9              	100.00%		B8C9Z5              	100.00%
                    	       		B8LDI1              	99.25%
Bootstrap support for Q758U9 as seed ortholog is 100%.
Bootstrap support for B8C9Z5 as seed ortholog is 100%.

Group of orthologs #187. Best score 438 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.pseudonana:108

Q758Q0              	100.00%		B8CBU1              	100.00%
Bootstrap support for Q758Q0 as seed ortholog is 78%.
Bootstrap support for B8CBU1 as seed ortholog is 97%.

Group of orthologs #188. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 T.pseudonana:436

Q752Q7              	100.00%		B8C1R3              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 100%.
Bootstrap support for B8C1R3 as seed ortholog is 100%.

Group of orthologs #189. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:364 T.pseudonana:315

Q756Z1              	100.00%		B8BZE7              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 100%.
Bootstrap support for B8BZE7 as seed ortholog is 100%.

Group of orthologs #190. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:328 T.pseudonana:330

Q74ZS6              	100.00%		B8CFU7              	100.00%
Bootstrap support for Q74ZS6 as seed ortholog is 100%.
Bootstrap support for B8CFU7 as seed ortholog is 100%.

Group of orthologs #191. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 T.pseudonana:329

Q75CR7              	100.00%		B8BYX0              	100.00%
                    	       		B8BT05              	27.32%
Bootstrap support for Q75CR7 as seed ortholog is 100%.
Bootstrap support for B8BYX0 as seed ortholog is 100%.

Group of orthologs #192. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 T.pseudonana:435

Q753S4              	100.00%		B8BSI1              	100.00%
Bootstrap support for Q753S4 as seed ortholog is 100%.
Bootstrap support for B8BSI1 as seed ortholog is 100%.

Group of orthologs #193. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 T.pseudonana:435

Q753S1              	100.00%		B8BU46              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for B8BU46 as seed ortholog is 100%.

Group of orthologs #194. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 T.pseudonana:435

Q753Y9              	100.00%		B8BVN8              	100.00%
Bootstrap support for Q753Y9 as seed ortholog is 100%.
Bootstrap support for B8BVN8 as seed ortholog is 100%.

Group of orthologs #195. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:202

Q753X2              	100.00%		B8C7W7              	100.00%
Bootstrap support for Q753X2 as seed ortholog is 99%.
Bootstrap support for B8C7W7 as seed ortholog is 99%.

Group of orthologs #196. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:199 T.pseudonana:134

Q75AD4              	100.00%		B8CCW2              	100.00%
Bootstrap support for Q75AD4 as seed ortholog is 100%.
Bootstrap support for B8CCW2 as seed ortholog is 99%.

Group of orthologs #197. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.pseudonana:96

Q758W1              	100.00%		B8BYY3              	100.00%
Q75CG3              	37.24%		
Bootstrap support for Q758W1 as seed ortholog is 96%.
Bootstrap support for B8BYY3 as seed ortholog is 98%.

Group of orthologs #198. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:307 T.pseudonana:347

Q75AF7              	100.00%		B8BRC4              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 100%.
Bootstrap support for B8BRC4 as seed ortholog is 100%.

Group of orthologs #199. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:431 T.pseudonana:33

Q75F64              	100.00%		B8BWW6              	100.00%
                    	       		B8C9R1              	51.17%
Bootstrap support for Q75F64 as seed ortholog is 100%.
Bootstrap support for B8BWW6 as seed ortholog is 85%.

Group of orthologs #200. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:322 T.pseudonana:273

Q74ZC1              	100.00%		B8C552              	100.00%
Bootstrap support for Q74ZC1 as seed ortholog is 100%.
Bootstrap support for B8C552 as seed ortholog is 100%.

Group of orthologs #201. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 T.pseudonana:430

Q750T5              	100.00%		B8BZE2              	100.00%
Bootstrap support for Q750T5 as seed ortholog is 100%.
Bootstrap support for B8BZE2 as seed ortholog is 100%.

Group of orthologs #202. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 T.pseudonana:430

Q75BP7              	100.00%		B8BVD8              	100.00%
Bootstrap support for Q75BP7 as seed ortholog is 100%.
Bootstrap support for B8BVD8 as seed ortholog is 100%.

Group of orthologs #203. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 T.pseudonana:92

Q757Q0              	100.00%		B8LCF8              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for B8LCF8 as seed ortholog is 98%.

Group of orthologs #204. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:191

Q750T4              	100.00%		B8C3A0              	100.00%
Bootstrap support for Q750T4 as seed ortholog is 99%.
Bootstrap support for B8C3A0 as seed ortholog is 99%.

Group of orthologs #205. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 T.pseudonana:428

Q758F5              	100.00%		B8CB37              	100.00%
Bootstrap support for Q758F5 as seed ortholog is 100%.
Bootstrap support for B8CB37 as seed ortholog is 100%.

Group of orthologs #206. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:427 T.pseudonana:427

Q75B31              	100.00%		B8C1V6              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for B8C1V6 as seed ortholog is 100%.

Group of orthologs #207. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.pseudonana:343

Q74ZS1              	100.00%		B8BUF0              	100.00%
Bootstrap support for Q74ZS1 as seed ortholog is 100%.
Bootstrap support for B8BUF0 as seed ortholog is 100%.

Group of orthologs #208. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:420 T.pseudonana:103

Q74ZK4              	100.00%		B8LBU8              	100.00%
                    	       		B5YNT2              	17.13%
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for B8LBU8 as seed ortholog is 99%.

Group of orthologs #209. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:420 T.pseudonana:420

Q75BR1              	100.00%		B8BXA7              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for B8BXA7 as seed ortholog is 100%.

Group of orthologs #210. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.pseudonana:420

Q75D18              	100.00%		B8BZA9              	100.00%
Bootstrap support for Q75D18 as seed ortholog is 100%.
Bootstrap support for B8BZA9 as seed ortholog is 100%.

Group of orthologs #211. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 T.pseudonana:361

Q75C71              	100.00%		B8C655              	100.00%
Bootstrap support for Q75C71 as seed ortholog is 100%.
Bootstrap support for B8C655 as seed ortholog is 100%.

Group of orthologs #212. Best score 416 bits
Score difference with first non-orthologous sequence - A.gossypii:416 T.pseudonana:416

Q75CB7              	100.00%		B8CC91              	100.00%
Bootstrap support for Q75CB7 as seed ortholog is 100%.
Bootstrap support for B8CC91 as seed ortholog is 100%.

Group of orthologs #213. Best score 415 bits
Score difference with first non-orthologous sequence - A.gossypii:415 T.pseudonana:415

Q75E77              	100.00%		B8C3E7              	100.00%
Bootstrap support for Q75E77 as seed ortholog is 100%.
Bootstrap support for B8C3E7 as seed ortholog is 100%.

Group of orthologs #214. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.pseudonana:209

Q75C76              	100.00%		B8BX16              	100.00%
Bootstrap support for Q75C76 as seed ortholog is 100%.
Bootstrap support for B8BX16 as seed ortholog is 100%.

Group of orthologs #215. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:414 T.pseudonana:414

Q75E56              	100.00%		B8C8Q6              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for B8C8Q6 as seed ortholog is 100%.

Group of orthologs #216. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:414 T.pseudonana:268

Q75BT4              	100.00%		B8CDX2              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for B8CDX2 as seed ortholog is 100%.

Group of orthologs #217. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:414 T.pseudonana:414

Q759A5              	100.00%		B8CGF2              	100.00%
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for B8CGF2 as seed ortholog is 100%.

Group of orthologs #218. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:411 T.pseudonana:29

Q75D98              	100.00%		B8CFB5              	100.00%
Q750T1              	71.12%		
Q75D99              	21.32%		
Bootstrap support for Q75D98 as seed ortholog is 100%.
Bootstrap support for B8CFB5 as seed ortholog is 65%.
Alternative seed ortholog is B8CDY3 (29 bits away from this cluster)

Group of orthologs #219. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:4 T.pseudonana:203

Q759R9              	100.00%		B8BUK1              	100.00%
Bootstrap support for Q759R9 as seed ortholog is 53%.
Alternative seed ortholog is Q75AM5 (4 bits away from this cluster)
Bootstrap support for B8BUK1 as seed ortholog is 100%.

Group of orthologs #220. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:226 T.pseudonana:72

Q757G0              	100.00%		B8C1X3              	100.00%
Bootstrap support for Q757G0 as seed ortholog is 99%.
Bootstrap support for B8C1X3 as seed ortholog is 88%.

Group of orthologs #221. Best score 410 bits
Score difference with first non-orthologous sequence - A.gossypii:21 T.pseudonana:73

Q74ZR2              	100.00%		B8CFV6              	100.00%
Bootstrap support for Q74ZR2 as seed ortholog is 75%.
Bootstrap support for B8CFV6 as seed ortholog is 99%.

Group of orthologs #222. Best score 408 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:235

Q75B16              	100.00%		B8CC85              	100.00%
Bootstrap support for Q75B16 as seed ortholog is 99%.
Bootstrap support for B8CC85 as seed ortholog is 100%.

Group of orthologs #223. Best score 407 bits
Score difference with first non-orthologous sequence - A.gossypii:407 T.pseudonana:407

Q753I4              	100.00%		B8C288              	100.00%
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for B8C288 as seed ortholog is 100%.

Group of orthologs #224. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 T.pseudonana:406

Q751T0              	100.00%		B8C0X8              	100.00%
Bootstrap support for Q751T0 as seed ortholog is 100%.
Bootstrap support for B8C0X8 as seed ortholog is 100%.

Group of orthologs #225. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 T.pseudonana:246

Q754E1              	100.00%		B8BZH6              	100.00%
Bootstrap support for Q754E1 as seed ortholog is 100%.
Bootstrap support for B8BZH6 as seed ortholog is 100%.

Group of orthologs #226. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:208

Q75DW1              	100.00%		B8C7Q8              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 100%.
Bootstrap support for B8C7Q8 as seed ortholog is 99%.

Group of orthologs #227. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:291 T.pseudonana:338

Q75DA4              	100.00%		B8C4S3              	100.00%
Bootstrap support for Q75DA4 as seed ortholog is 100%.
Bootstrap support for B8C4S3 as seed ortholog is 100%.

Group of orthologs #228. Best score 404 bits
Score difference with first non-orthologous sequence - A.gossypii:404 T.pseudonana:176

Q00063              	100.00%		B8CBR8              	100.00%
Bootstrap support for Q00063 as seed ortholog is 100%.
Bootstrap support for B8CBR8 as seed ortholog is 99%.

Group of orthologs #229. Best score 404 bits
Score difference with first non-orthologous sequence - A.gossypii:229 T.pseudonana:195

Q75EW9              	100.00%		B8C1F2              	100.00%
Bootstrap support for Q75EW9 as seed ortholog is 100%.
Bootstrap support for B8C1F2 as seed ortholog is 100%.

Group of orthologs #230. Best score 403 bits
Score difference with first non-orthologous sequence - A.gossypii:403 T.pseudonana:403

Q74Z55              	100.00%		B8BV49              	100.00%
Bootstrap support for Q74Z55 as seed ortholog is 100%.
Bootstrap support for B8BV49 as seed ortholog is 100%.

Group of orthologs #231. Best score 403 bits
Score difference with first non-orthologous sequence - A.gossypii:38 T.pseudonana:403

Q75EA7              	100.00%		B8BRT9              	100.00%
Bootstrap support for Q75EA7 as seed ortholog is 76%.
Bootstrap support for B8BRT9 as seed ortholog is 100%.

Group of orthologs #232. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:401

Q74ZT2              	100.00%		B8BXS4              	100.00%
Bootstrap support for Q74ZT2 as seed ortholog is 99%.
Bootstrap support for B8BXS4 as seed ortholog is 100%.

Group of orthologs #233. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:401 T.pseudonana:401

Q753M0              	100.00%		B8C274              	100.00%
Bootstrap support for Q753M0 as seed ortholog is 100%.
Bootstrap support for B8C274 as seed ortholog is 100%.

Group of orthologs #234. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:401 T.pseudonana:215

Q75EB0              	100.00%		B8LC08              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for B8LC08 as seed ortholog is 100%.

Group of orthologs #235. Best score 399 bits
Score difference with first non-orthologous sequence - A.gossypii:399 T.pseudonana:399

Q757D1              	100.00%		B8BVL8              	100.00%
Bootstrap support for Q757D1 as seed ortholog is 100%.
Bootstrap support for B8BVL8 as seed ortholog is 100%.

Group of orthologs #236. Best score 397 bits
Score difference with first non-orthologous sequence - A.gossypii:397 T.pseudonana:397

Q756G7              	100.00%		B5YNP3              	100.00%
Bootstrap support for Q756G7 as seed ortholog is 100%.
Bootstrap support for B5YNP3 as seed ortholog is 100%.

Group of orthologs #237. Best score 396 bits
Score difference with first non-orthologous sequence - A.gossypii:396 T.pseudonana:324

Q75CD0              	100.00%		B8CEV7              	100.00%
Bootstrap support for Q75CD0 as seed ortholog is 100%.
Bootstrap support for B8CEV7 as seed ortholog is 100%.

Group of orthologs #238. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.pseudonana:96

Q755A5              	100.00%		B8BYF1              	100.00%
Bootstrap support for Q755A5 as seed ortholog is 100%.
Bootstrap support for B8BYF1 as seed ortholog is 99%.

Group of orthologs #239. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:333 T.pseudonana:394

Q75CV3              	100.00%		B8C0H0              	100.00%
Bootstrap support for Q75CV3 as seed ortholog is 100%.
Bootstrap support for B8C0H0 as seed ortholog is 100%.

Group of orthologs #240. Best score 393 bits
Score difference with first non-orthologous sequence - A.gossypii:305 T.pseudonana:269

Q756W4              	100.00%		B8CAU3              	100.00%
Bootstrap support for Q756W4 as seed ortholog is 100%.
Bootstrap support for B8CAU3 as seed ortholog is 100%.

Group of orthologs #241. Best score 392 bits
Score difference with first non-orthologous sequence - A.gossypii:392 T.pseudonana:392

Q758F1              	100.00%		B5YNX7              	100.00%
                    	       		B8C4Q2              	43.75%
                    	       		B8BZ32              	24.00%
Bootstrap support for Q758F1 as seed ortholog is 100%.
Bootstrap support for B5YNX7 as seed ortholog is 100%.

Group of orthologs #242. Best score 392 bits
Score difference with first non-orthologous sequence - A.gossypii:392 T.pseudonana:392

Q758T5              	100.00%		B8C2C0              	100.00%
Bootstrap support for Q758T5 as seed ortholog is 100%.
Bootstrap support for B8C2C0 as seed ortholog is 100%.

Group of orthologs #243. Best score 390 bits
Score difference with first non-orthologous sequence - A.gossypii:390 T.pseudonana:390

Q756Z0              	100.00%		B8CAS6              	100.00%
Bootstrap support for Q756Z0 as seed ortholog is 100%.
Bootstrap support for B8CAS6 as seed ortholog is 100%.

Group of orthologs #244. Best score 390 bits
Score difference with first non-orthologous sequence - A.gossypii:390 T.pseudonana:390

Q75BT9              	100.00%		B8CFZ9              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for B8CFZ9 as seed ortholog is 100%.

Group of orthologs #245. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 T.pseudonana:389

Q750T6              	100.00%		B5YN29              	100.00%
                    	       		B8C2A3              	10.91%
Bootstrap support for Q750T6 as seed ortholog is 100%.
Bootstrap support for B5YN29 as seed ortholog is 100%.

Group of orthologs #246. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 T.pseudonana:389

Q75B59              	100.00%		B8BT00              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for B8BT00 as seed ortholog is 100%.

Group of orthologs #247. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:129

Q757B9              	100.00%		B8C1N5              	100.00%
                    	       		B8CDR4              	8.13%
Bootstrap support for Q757B9 as seed ortholog is 91%.
Bootstrap support for B8C1N5 as seed ortholog is 96%.

Group of orthologs #248. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 T.pseudonana:156

Q75EN8              	100.00%		B8BT81              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for B8BT81 as seed ortholog is 99%.

Group of orthologs #249. Best score 387 bits
Score difference with first non-orthologous sequence - A.gossypii:387 T.pseudonana:387

Q755K2              	100.00%		B8BS64              	100.00%
Bootstrap support for Q755K2 as seed ortholog is 100%.
Bootstrap support for B8BS64 as seed ortholog is 100%.

Group of orthologs #250. Best score 387 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.pseudonana:255

Q758Q8              	100.00%		B8C663              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for B8C663 as seed ortholog is 100%.

Group of orthologs #251. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 T.pseudonana:386

Q75A16              	100.00%		B8LC61              	100.00%
Bootstrap support for Q75A16 as seed ortholog is 100%.
Bootstrap support for B8LC61 as seed ortholog is 100%.

Group of orthologs #252. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 T.pseudonana:385

Q75E89              	100.00%		B8C239              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for B8C239 as seed ortholog is 100%.

Group of orthologs #253. Best score 384 bits
Score difference with first non-orthologous sequence - A.gossypii:384 T.pseudonana:384

Q754I8              	100.00%		B8C6A7              	100.00%
                    	       		B8LE49              	100.00%
Bootstrap support for Q754I8 as seed ortholog is 100%.
Bootstrap support for B8C6A7 as seed ortholog is 100%.
Bootstrap support for B8LE49 as seed ortholog is 100%.

Group of orthologs #254. Best score 383 bits
Score difference with first non-orthologous sequence - A.gossypii:383 T.pseudonana:310

Q750E9              	100.00%		B8C0D0              	100.00%
Bootstrap support for Q750E9 as seed ortholog is 100%.
Bootstrap support for B8C0D0 as seed ortholog is 100%.

Group of orthologs #255. Best score 381 bits
Score difference with first non-orthologous sequence - A.gossypii:381 T.pseudonana:381

Q758R9              	100.00%		B8BU23              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for B8BU23 as seed ortholog is 100%.

Group of orthologs #256. Best score 381 bits
Score difference with first non-orthologous sequence - A.gossypii:381 T.pseudonana:320

Q757H0              	100.00%		B8BX36              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for B8BX36 as seed ortholog is 100%.

Group of orthologs #257. Best score 381 bits
Score difference with first non-orthologous sequence - A.gossypii:381 T.pseudonana:336

Q75F36              	100.00%		B8BQJ0              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for B8BQJ0 as seed ortholog is 100%.

Group of orthologs #258. Best score 380 bits
Score difference with first non-orthologous sequence - A.gossypii:380 T.pseudonana:30

Q74ZE0              	100.00%		B8C444              	100.00%
Bootstrap support for Q74ZE0 as seed ortholog is 100%.
Bootstrap support for B8C444 as seed ortholog is 71%.
Alternative seed ortholog is B8BQK8 (30 bits away from this cluster)

Group of orthologs #259. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.pseudonana:148

Q757K5              	100.00%		B8BUC3              	100.00%
Bootstrap support for Q757K5 as seed ortholog is 99%.
Bootstrap support for B8BUC3 as seed ortholog is 99%.

Group of orthologs #260. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.pseudonana:378

Q756N0              	100.00%		B8CBV0              	100.00%
Bootstrap support for Q756N0 as seed ortholog is 99%.
Bootstrap support for B8CBV0 as seed ortholog is 100%.

Group of orthologs #261. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 T.pseudonana:377

Q752T2              	100.00%		B8C135              	100.00%
                    	       		B8BX76              	29.18%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for B8C135 as seed ortholog is 100%.

Group of orthologs #262. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 T.pseudonana:377

Q755C2              	100.00%		B5YME4              	100.00%
Bootstrap support for Q755C2 as seed ortholog is 100%.
Bootstrap support for B5YME4 as seed ortholog is 100%.

Group of orthologs #263. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 T.pseudonana:377

Q75A83              	100.00%		B8BZC4              	100.00%
Bootstrap support for Q75A83 as seed ortholog is 100%.
Bootstrap support for B8BZC4 as seed ortholog is 100%.

Group of orthologs #264. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 T.pseudonana:306

Q751I9              	100.00%		B8C9X7              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for B8C9X7 as seed ortholog is 100%.

Group of orthologs #265. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:194 T.pseudonana:212

Q75BB2              	100.00%		B8C2Q4              	100.00%
Bootstrap support for Q75BB2 as seed ortholog is 100%.
Bootstrap support for B8C2Q4 as seed ortholog is 100%.

Group of orthologs #266. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.pseudonana:158

Q74ZV2              	100.00%		B8CBW0              	100.00%
                    	       		B8C116              	27.33%
                    	       		B8C0G6              	5.83%
                    	       		B8C0G7              	5.72%
Bootstrap support for Q74ZV2 as seed ortholog is 100%.
Bootstrap support for B8CBW0 as seed ortholog is 99%.

Group of orthologs #267. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:375 T.pseudonana:274

Q74ZX3              	100.00%		B5YN17              	100.00%
                    	       		B8C017              	7.53%
Bootstrap support for Q74ZX3 as seed ortholog is 100%.
Bootstrap support for B5YN17 as seed ortholog is 100%.

Group of orthologs #268. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:375 T.pseudonana:5

Q74ZH6              	100.00%		B8BQ31              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for B8BQ31 as seed ortholog is 44%.
Alternative seed ortholog is B8BTB6 (5 bits away from this cluster)

Group of orthologs #269. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.pseudonana:229

Q75F03              	100.00%		B5YMT2              	100.00%
Bootstrap support for Q75F03 as seed ortholog is 99%.
Bootstrap support for B5YMT2 as seed ortholog is 100%.

Group of orthologs #270. Best score 372 bits
Score difference with first non-orthologous sequence - A.gossypii:372 T.pseudonana:372

Q759Q4              	100.00%		B5YMV7              	100.00%
Bootstrap support for Q759Q4 as seed ortholog is 100%.
Bootstrap support for B5YMV7 as seed ortholog is 100%.

Group of orthologs #271. Best score 372 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:324

Q750S7              	100.00%		B8C4C1              	100.00%
Bootstrap support for Q750S7 as seed ortholog is 100%.
Bootstrap support for B8C4C1 as seed ortholog is 100%.

Group of orthologs #272. Best score 368 bits
Score difference with first non-orthologous sequence - A.gossypii:368 T.pseudonana:368

Q756M4              	100.00%		B5YLI4              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for B5YLI4 as seed ortholog is 100%.

Group of orthologs #273. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 T.pseudonana:366

Q750Z9              	100.00%		B8C1Z0              	100.00%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for B8C1Z0 as seed ortholog is 100%.

Group of orthologs #274. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.pseudonana:171

Q75F95              	100.00%		B8BT14              	100.00%
Bootstrap support for Q75F95 as seed ortholog is 99%.
Bootstrap support for B8BT14 as seed ortholog is 99%.

Group of orthologs #275. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:364 T.pseudonana:364

Q75F62              	100.00%		B8CE45              	100.00%
Bootstrap support for Q75F62 as seed ortholog is 100%.
Bootstrap support for B8CE45 as seed ortholog is 100%.

Group of orthologs #276. Best score 363 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:114

Q74ZJ0              	100.00%		B8BQL0              	100.00%
Bootstrap support for Q74ZJ0 as seed ortholog is 99%.
Bootstrap support for B8BQL0 as seed ortholog is 98%.

Group of orthologs #277. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:362 T.pseudonana:362

Q758H3              	100.00%		B8BS06              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for B8BS06 as seed ortholog is 100%.

Group of orthologs #278. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:7 T.pseudonana:143

Q75C31              	100.00%		B5YP36              	100.00%
                    	       		B8LCF5              	6.59%
Bootstrap support for Q75C31 as seed ortholog is 65%.
Alternative seed ortholog is Q750J2 (7 bits away from this cluster)
Bootstrap support for B5YP36 as seed ortholog is 99%.

Group of orthologs #279. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.pseudonana:123

Q754U8              	100.00%		B8C599              	100.00%
Bootstrap support for Q754U8 as seed ortholog is 99%.
Bootstrap support for B8C599 as seed ortholog is 99%.

Group of orthologs #280. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:361 T.pseudonana:361

Q75EW4              	100.00%		B8C502              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for B8C502 as seed ortholog is 100%.

Group of orthologs #281. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:360 T.pseudonana:52

Q759A9              	100.00%		B8BZT6              	100.00%
                    	       		B8BZT7              	51.63%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for B8BZT6 as seed ortholog is 87%.

Group of orthologs #282. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:360 T.pseudonana:102

Q759V7              	100.00%		B8C5Z6              	100.00%
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for B8C5Z6 as seed ortholog is 99%.

Group of orthologs #283. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 T.pseudonana:75

Q758Q9              	100.00%		B8C5T4              	100.00%
Bootstrap support for Q758Q9 as seed ortholog is 100%.
Bootstrap support for B8C5T4 as seed ortholog is 85%.

Group of orthologs #284. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 T.pseudonana:359

Q75A43              	100.00%		B8C7E5              	100.00%
Bootstrap support for Q75A43 as seed ortholog is 100%.
Bootstrap support for B8C7E5 as seed ortholog is 100%.

Group of orthologs #285. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:274 T.pseudonana:196

Q74ZA9              	100.00%		B8BU31              	100.00%
Bootstrap support for Q74ZA9 as seed ortholog is 100%.
Bootstrap support for B8BU31 as seed ortholog is 100%.

Group of orthologs #286. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:35 T.pseudonana:24

Q75A61              	100.00%		B8BWY0              	100.00%
Bootstrap support for Q75A61 as seed ortholog is 85%.
Bootstrap support for B8BWY0 as seed ortholog is 62%.
Alternative seed ortholog is B5YMU1 (24 bits away from this cluster)

Group of orthologs #287. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 T.pseudonana:358

Q755L3              	100.00%		B8C801              	100.00%
Bootstrap support for Q755L3 as seed ortholog is 100%.
Bootstrap support for B8C801 as seed ortholog is 100%.

Group of orthologs #288. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 T.pseudonana:356

Q75A67              	100.00%		B8C7R3              	100.00%
Bootstrap support for Q75A67 as seed ortholog is 100%.
Bootstrap support for B8C7R3 as seed ortholog is 100%.

Group of orthologs #289. Best score 355 bits
Score difference with first non-orthologous sequence - A.gossypii:355 T.pseudonana:355

Q752F4              	100.00%		B8CGC1              	100.00%
Bootstrap support for Q752F4 as seed ortholog is 100%.
Bootstrap support for B8CGC1 as seed ortholog is 100%.

Group of orthologs #290. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 T.pseudonana:354

Q75CF4              	100.00%		B8CFL4              	100.00%
Bootstrap support for Q75CF4 as seed ortholog is 100%.
Bootstrap support for B8CFL4 as seed ortholog is 100%.

Group of orthologs #291. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:219 T.pseudonana:353

Q75AW5              	100.00%		B8CEM3              	100.00%
Bootstrap support for Q75AW5 as seed ortholog is 99%.
Bootstrap support for B8CEM3 as seed ortholog is 100%.

Group of orthologs #292. Best score 348 bits
Score difference with first non-orthologous sequence - A.gossypii:348 T.pseudonana:348

Q758J2              	100.00%		B8BT41              	100.00%
Bootstrap support for Q758J2 as seed ortholog is 100%.
Bootstrap support for B8BT41 as seed ortholog is 100%.

Group of orthologs #293. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:347 T.pseudonana:347

Q75CI4              	100.00%		B8BYI4              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for B8BYI4 as seed ortholog is 100%.

Group of orthologs #294. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 T.pseudonana:346

Q74ZU1              	100.00%		B8BX06              	100.00%
Bootstrap support for Q74ZU1 as seed ortholog is 100%.
Bootstrap support for B8BX06 as seed ortholog is 100%.

Group of orthologs #295. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 T.pseudonana:74

Q750R4              	100.00%		B8BYT9              	100.00%
Bootstrap support for Q750R4 as seed ortholog is 100%.
Bootstrap support for B8BYT9 as seed ortholog is 94%.

Group of orthologs #296. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:115

Q757W8              	100.00%		B8BV32              	100.00%
Bootstrap support for Q757W8 as seed ortholog is 97%.
Bootstrap support for B8BV32 as seed ortholog is 99%.

Group of orthologs #297. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:344 T.pseudonana:109

Q75E90              	100.00%		B8BYH6              	100.00%
Bootstrap support for Q75E90 as seed ortholog is 100%.
Bootstrap support for B8BYH6 as seed ortholog is 99%.

Group of orthologs #298. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.pseudonana:145

Q752Y9              	100.00%		B8CA11              	100.00%
Bootstrap support for Q752Y9 as seed ortholog is 99%.
Bootstrap support for B8CA11 as seed ortholog is 99%.

Group of orthologs #299. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.pseudonana:342

Q74ZF8              	100.00%		B8C817              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for B8C817 as seed ortholog is 100%.

Group of orthologs #300. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.pseudonana:223

Q751B0              	100.00%		B8CAK5              	100.00%
Bootstrap support for Q751B0 as seed ortholog is 100%.
Bootstrap support for B8CAK5 as seed ortholog is 100%.

Group of orthologs #301. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.pseudonana:342

Q750I3              	100.00%		B8LBM3              	100.00%
Bootstrap support for Q750I3 as seed ortholog is 100%.
Bootstrap support for B8LBM3 as seed ortholog is 100%.

Group of orthologs #302. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.pseudonana:342

Q75AP7              	100.00%		B8CCN2              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 100%.
Bootstrap support for B8CCN2 as seed ortholog is 100%.

Group of orthologs #303. Best score 341 bits
Score difference with first non-orthologous sequence - A.gossypii:341 T.pseudonana:284

Q750X3              	100.00%		B8C670              	100.00%
Bootstrap support for Q750X3 as seed ortholog is 100%.
Bootstrap support for B8C670 as seed ortholog is 100%.

Group of orthologs #304. Best score 339 bits
Score difference with first non-orthologous sequence - A.gossypii:339 T.pseudonana:339

Q75EK2              	100.00%		B8BXE6              	100.00%
Bootstrap support for Q75EK2 as seed ortholog is 100%.
Bootstrap support for B8BXE6 as seed ortholog is 100%.

Group of orthologs #305. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.pseudonana:237

Q753X3              	100.00%		B8BQ72              	100.00%
Bootstrap support for Q753X3 as seed ortholog is 100%.
Bootstrap support for B8BQ72 as seed ortholog is 100%.

Group of orthologs #306. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.pseudonana:338

Q75DZ9              	100.00%		B5YMJ7              	100.00%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for B5YMJ7 as seed ortholog is 100%.

Group of orthologs #307. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.pseudonana:338

Q75AE7              	100.00%		B8CAZ0              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for B8CAZ0 as seed ortholog is 100%.

Group of orthologs #308. Best score 337 bits
Score difference with first non-orthologous sequence - A.gossypii:337 T.pseudonana:337

Q75BY3              	100.00%		B8BUP9              	100.00%
Bootstrap support for Q75BY3 as seed ortholog is 100%.
Bootstrap support for B8BUP9 as seed ortholog is 100%.

Group of orthologs #309. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 T.pseudonana:336

Q759T9              	100.00%		B8C3L2              	100.00%
                    	       		B8CC58              	25.56%
Bootstrap support for Q759T9 as seed ortholog is 100%.
Bootstrap support for B8C3L2 as seed ortholog is 100%.

Group of orthologs #310. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 T.pseudonana:336

Q75B77              	100.00%		B8C9C5              	100.00%
                    	       		B8C660              	39.22%
Bootstrap support for Q75B77 as seed ortholog is 100%.
Bootstrap support for B8C9C5 as seed ortholog is 100%.

Group of orthologs #311. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.pseudonana:336

Q75CB5              	100.00%		B8C1H9              	100.00%
Bootstrap support for Q75CB5 as seed ortholog is 100%.
Bootstrap support for B8C1H9 as seed ortholog is 100%.

Group of orthologs #312. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 T.pseudonana:336

Q750Q5              	100.00%		B8CAM6              	100.00%
Bootstrap support for Q750Q5 as seed ortholog is 100%.
Bootstrap support for B8CAM6 as seed ortholog is 100%.

Group of orthologs #313. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 T.pseudonana:336

Q75DA2              	100.00%		B8LCW9              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for B8LCW9 as seed ortholog is 100%.

Group of orthologs #314. Best score 335 bits
Score difference with first non-orthologous sequence - A.gossypii:335 T.pseudonana:335

Q75CE5              	100.00%		B8BR08              	100.00%
Bootstrap support for Q75CE5 as seed ortholog is 100%.
Bootstrap support for B8BR08 as seed ortholog is 100%.

Group of orthologs #315. Best score 335 bits
Score difference with first non-orthologous sequence - A.gossypii:335 T.pseudonana:335

Q75B10              	100.00%		B8CCL2              	100.00%
Bootstrap support for Q75B10 as seed ortholog is 100%.
Bootstrap support for B8CCL2 as seed ortholog is 100%.

Group of orthologs #316. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:334 T.pseudonana:334

Q74ZL8              	100.00%		B8BZX6              	100.00%
Bootstrap support for Q74ZL8 as seed ortholog is 100%.
Bootstrap support for B8BZX6 as seed ortholog is 100%.

Group of orthologs #317. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.pseudonana:204

Q753G6              	100.00%		B8BTM4              	100.00%
Bootstrap support for Q753G6 as seed ortholog is 99%.
Bootstrap support for B8BTM4 as seed ortholog is 99%.

Group of orthologs #318. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:333 T.pseudonana:96

Q75CW2              	100.00%		B8BVA0              	100.00%
Bootstrap support for Q75CW2 as seed ortholog is 100%.
Bootstrap support for B8BVA0 as seed ortholog is 99%.

Group of orthologs #319. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.pseudonana:270

Q75F99              	100.00%		B8C6X0              	100.00%
Bootstrap support for Q75F99 as seed ortholog is 100%.
Bootstrap support for B8C6X0 as seed ortholog is 100%.

Group of orthologs #320. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:332 T.pseudonana:165

Q750C5              	100.00%		B8BSK1              	100.00%
Bootstrap support for Q750C5 as seed ortholog is 100%.
Bootstrap support for B8BSK1 as seed ortholog is 100%.

Group of orthologs #321. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:194 T.pseudonana:331

Q755U7              	100.00%		B8CFF0              	100.00%
Bootstrap support for Q755U7 as seed ortholog is 99%.
Bootstrap support for B8CFF0 as seed ortholog is 100%.

Group of orthologs #322. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:181

Q759M3              	100.00%		B8CFP1              	100.00%
Bootstrap support for Q759M3 as seed ortholog is 98%.
Bootstrap support for B8CFP1 as seed ortholog is 100%.

Group of orthologs #323. Best score 330 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:256

Q75F61              	100.00%		B8CCP4              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 99%.
Bootstrap support for B8CCP4 as seed ortholog is 100%.

Group of orthologs #324. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:329 T.pseudonana:329

Q75CF0              	100.00%		B5YNC2              	100.00%
Bootstrap support for Q75CF0 as seed ortholog is 100%.
Bootstrap support for B5YNC2 as seed ortholog is 100%.

Group of orthologs #325. Best score 328 bits
Score difference with first non-orthologous sequence - A.gossypii:328 T.pseudonana:328

Q75BC3              	100.00%		B8BSY2              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for B8BSY2 as seed ortholog is 100%.

Group of orthologs #326. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 T.pseudonana:327

Q752V5              	100.00%		B8C5B5              	100.00%
Bootstrap support for Q752V5 as seed ortholog is 100%.
Bootstrap support for B8C5B5 as seed ortholog is 100%.

Group of orthologs #327. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 T.pseudonana:160

Q74ZU5              	100.00%		B8BVN4              	100.00%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for B8BVN4 as seed ortholog is 99%.

Group of orthologs #328. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 T.pseudonana:326

Q756G8              	100.00%		B8BZ94              	100.00%
Bootstrap support for Q756G8 as seed ortholog is 100%.
Bootstrap support for B8BZ94 as seed ortholog is 100%.

Group of orthologs #329. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 T.pseudonana:326

Q758F6              	100.00%		B8C527              	100.00%
Bootstrap support for Q758F6 as seed ortholog is 100%.
Bootstrap support for B8C527 as seed ortholog is 100%.

Group of orthologs #330. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 T.pseudonana:326

Q753H8              	100.00%		B8CCK5              	100.00%
Bootstrap support for Q753H8 as seed ortholog is 100%.
Bootstrap support for B8CCK5 as seed ortholog is 100%.

Group of orthologs #331. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 T.pseudonana:324

Q75DQ3              	100.00%		B8CAH9              	100.00%
                    	       		B8CAI8              	78.66%
                    	       		B8C9Y8              	67.40%
                    	       		B8BVN5              	59.98%
                    	       		B8CDW8              	35.81%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for B8CAH9 as seed ortholog is 100%.

Group of orthologs #332. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 T.pseudonana:324

Q75EI5              	100.00%		B8C4R4              	100.00%
Bootstrap support for Q75EI5 as seed ortholog is 100%.
Bootstrap support for B8C4R4 as seed ortholog is 100%.

Group of orthologs #333. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:323 T.pseudonana:323

Q75A13              	100.00%		B8CGR5              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for B8CGR5 as seed ortholog is 100%.

Group of orthologs #334. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 T.pseudonana:122

Q753L0              	100.00%		B8LC01              	100.00%
Bootstrap support for Q753L0 as seed ortholog is 100%.
Bootstrap support for B8LC01 as seed ortholog is 99%.

Group of orthologs #335. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 T.pseudonana:27

Q75C94              	100.00%		B5YLF6              	100.00%
Q751Z2              	17.42%		B5YLI6              	100.00%
Bootstrap support for Q75C94 as seed ortholog is 100%.
Bootstrap support for B5YLF6 as seed ortholog is 72%.
Alternative seed ortholog is B8BPW6 (27 bits away from this cluster)
Bootstrap support for B5YLI6 as seed ortholog is 74%.
Alternative seed ortholog is B8BPW6 (27 bits away from this cluster)

Group of orthologs #336. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:321

Q74Z87              	100.00%		B8CGM0              	100.00%
Bootstrap support for Q74Z87 as seed ortholog is 99%.
Bootstrap support for B8CGM0 as seed ortholog is 100%.

Group of orthologs #337. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.pseudonana:320

Q753W1              	100.00%		B8BQR8              	100.00%
                    	       		B5YN39              	18.77%
Bootstrap support for Q753W1 as seed ortholog is 88%.
Bootstrap support for B8BQR8 as seed ortholog is 100%.

Group of orthologs #338. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:9 T.pseudonana:107

Q756M2              	100.00%		B8C1Q8              	100.00%
Bootstrap support for Q756M2 as seed ortholog is 56%.
Alternative seed ortholog is Q754Q3 (9 bits away from this cluster)
Bootstrap support for B8C1Q8 as seed ortholog is 99%.

Group of orthologs #339. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 T.pseudonana:319

Q752M1              	100.00%		B8C3H0              	100.00%
Bootstrap support for Q752M1 as seed ortholog is 100%.
Bootstrap support for B8C3H0 as seed ortholog is 100%.

Group of orthologs #340. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:318 T.pseudonana:88

Q750G3              	100.00%		B8BWV6              	100.00%
Bootstrap support for Q750G3 as seed ortholog is 100%.
Bootstrap support for B8BWV6 as seed ortholog is 91%.

Group of orthologs #341. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:37 T.pseudonana:69

Q75BI5              	100.00%		B8LE15              	100.00%
Bootstrap support for Q75BI5 as seed ortholog is 78%.
Bootstrap support for B8LE15 as seed ortholog is 88%.

Group of orthologs #342. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 T.pseudonana:317

Q75BG3              	100.00%		B8BVV7              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for B8BVV7 as seed ortholog is 100%.

Group of orthologs #343. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.pseudonana:176

Q756B9              	100.00%		B8C9M7              	100.00%
Bootstrap support for Q756B9 as seed ortholog is 100%.
Bootstrap support for B8C9M7 as seed ortholog is 100%.

Group of orthologs #344. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 T.pseudonana:317

Q755P9              	100.00%		B8LBN3              	100.00%
Bootstrap support for Q755P9 as seed ortholog is 100%.
Bootstrap support for B8LBN3 as seed ortholog is 100%.

Group of orthologs #345. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 T.pseudonana:315

Q75CG9              	100.00%		B8C4B1              	100.00%
Bootstrap support for Q75CG9 as seed ortholog is 100%.
Bootstrap support for B8C4B1 as seed ortholog is 100%.

Group of orthologs #346. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 T.pseudonana:223

Q75ED5              	100.00%		B8LD05              	100.00%
Bootstrap support for Q75ED5 as seed ortholog is 100%.
Bootstrap support for B8LD05 as seed ortholog is 100%.

Group of orthologs #347. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 T.pseudonana:171

Q75BE8              	100.00%		B8C515              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for B8C515 as seed ortholog is 99%.

Group of orthologs #348. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 T.pseudonana:227

Q75DS8              	100.00%		B8C6S5              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for B8C6S5 as seed ortholog is 100%.

Group of orthologs #349. Best score 313 bits
Score difference with first non-orthologous sequence - A.gossypii:313 T.pseudonana:313

Q751D8              	100.00%		B8BS75              	100.00%
Bootstrap support for Q751D8 as seed ortholog is 100%.
Bootstrap support for B8BS75 as seed ortholog is 100%.

Group of orthologs #350. Best score 313 bits
Score difference with first non-orthologous sequence - A.gossypii:313 T.pseudonana:313

Q75F08              	100.00%		B8BYK6              	100.00%
Bootstrap support for Q75F08 as seed ortholog is 100%.
Bootstrap support for B8BYK6 as seed ortholog is 100%.

Group of orthologs #351. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:312 T.pseudonana:312

Q74ZC6              	100.00%		B8BQQ4              	100.00%
Bootstrap support for Q74ZC6 as seed ortholog is 100%.
Bootstrap support for B8BQQ4 as seed ortholog is 100%.

Group of orthologs #352. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.pseudonana:311

Q74ZR6              	100.00%		B8BYN3              	100.00%
                    	       		B8BUY1              	7.10%
                    	       		B8BR66              	5.69%
Bootstrap support for Q74ZR6 as seed ortholog is 77%.
Bootstrap support for B8BYN3 as seed ortholog is 100%.

Group of orthologs #353. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.pseudonana:254

Q74ZK9              	100.00%		B8BQI9              	100.00%
Bootstrap support for Q74ZK9 as seed ortholog is 100%.
Bootstrap support for B8BQI9 as seed ortholog is 100%.

Group of orthologs #354. Best score 308 bits
Score difference with first non-orthologous sequence - A.gossypii:308 T.pseudonana:193

Q75CL7              	100.00%		B8BQC9              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for B8BQC9 as seed ortholog is 100%.

Group of orthologs #355. Best score 308 bits
Score difference with first non-orthologous sequence - A.gossypii:308 T.pseudonana:308

Q754D6              	100.00%		B8C013              	100.00%
Bootstrap support for Q754D6 as seed ortholog is 100%.
Bootstrap support for B8C013 as seed ortholog is 100%.

Group of orthologs #356. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:203 T.pseudonana:141

Q75C39              	100.00%		B8BXP3              	100.00%
Bootstrap support for Q75C39 as seed ortholog is 100%.
Bootstrap support for B8BXP3 as seed ortholog is 99%.

Group of orthologs #357. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.pseudonana:306

Q754S8              	100.00%		B8BS23              	100.00%
                    	       		B8CCL0              	19.45%
Bootstrap support for Q754S8 as seed ortholog is 95%.
Bootstrap support for B8BS23 as seed ortholog is 100%.

Group of orthologs #358. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:306 T.pseudonana:257

Q75C90              	100.00%		B8C2N6              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for B8C2N6 as seed ortholog is 100%.

Group of orthologs #359. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:306 T.pseudonana:229

Q75ET3              	100.00%		B8C1D3              	100.00%
Bootstrap support for Q75ET3 as seed ortholog is 100%.
Bootstrap support for B8C1D3 as seed ortholog is 100%.

Group of orthologs #360. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:306 T.pseudonana:183

Q75BA7              	100.00%		B8CFQ2              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for B8CFQ2 as seed ortholog is 100%.

Group of orthologs #361. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.pseudonana:82

Q75AE1              	100.00%		B8BWZ3              	100.00%
                    	       		B8LEZ1              	23.60%
Bootstrap support for Q75AE1 as seed ortholog is 100%.
Bootstrap support for B8BWZ3 as seed ortholog is 97%.

Group of orthologs #362. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 T.pseudonana:304

Q75C13              	100.00%		B5YLN7              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for B5YLN7 as seed ortholog is 100%.

Group of orthologs #363. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:129

Q750F8              	100.00%		B8C1L9              	100.00%
Bootstrap support for Q750F8 as seed ortholog is 98%.
Bootstrap support for B8C1L9 as seed ortholog is 99%.

Group of orthologs #364. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 T.pseudonana:246

Q756H0              	100.00%		B8CCQ3              	100.00%
Bootstrap support for Q756H0 as seed ortholog is 100%.
Bootstrap support for B8CCQ3 as seed ortholog is 100%.

Group of orthologs #365. Best score 303 bits
Score difference with first non-orthologous sequence - A.gossypii:303 T.pseudonana:303

Q759C6              	100.00%		B8C5V7              	100.00%
Bootstrap support for Q759C6 as seed ortholog is 100%.
Bootstrap support for B8C5V7 as seed ortholog is 100%.

Group of orthologs #366. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 T.pseudonana:202

Q75A55              	100.00%		B8CC79              	100.00%
Bootstrap support for Q75A55 as seed ortholog is 100%.
Bootstrap support for B8CC79 as seed ortholog is 100%.

Group of orthologs #367. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:39 T.pseudonana:229

Q759X1              	100.00%		B8BQC2              	100.00%
Bootstrap support for Q759X1 as seed ortholog is 84%.
Bootstrap support for B8BQC2 as seed ortholog is 100%.

Group of orthologs #368. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.pseudonana:301

Q757E3              	100.00%		B8BWN9              	100.00%
Bootstrap support for Q757E3 as seed ortholog is 100%.
Bootstrap support for B8BWN9 as seed ortholog is 100%.

Group of orthologs #369. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:2

Q75BY2              	100.00%		B8C892              	100.00%
Bootstrap support for Q75BY2 as seed ortholog is 99%.
Bootstrap support for B8C892 as seed ortholog is 53%.
Alternative seed ortholog is B8CEC8 (2 bits away from this cluster)

Group of orthologs #370. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 T.pseudonana:298

Q757W9              	100.00%		B8C964              	100.00%
Bootstrap support for Q757W9 as seed ortholog is 100%.
Bootstrap support for B8C964 as seed ortholog is 100%.

Group of orthologs #371. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.pseudonana:37

Q755B5              	100.00%		B8BQJ8              	100.00%
Q758E1              	52.90%		
Bootstrap support for Q755B5 as seed ortholog is 99%.
Bootstrap support for B8BQJ8 as seed ortholog is 87%.

Group of orthologs #372. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.pseudonana:31

Q757P6              	100.00%		B5YNY2              	100.00%
Bootstrap support for Q757P6 as seed ortholog is 100%.
Bootstrap support for B5YNY2 as seed ortholog is 72%.
Alternative seed ortholog is B8C973 (31 bits away from this cluster)

Group of orthologs #373. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.pseudonana:296

Q75AZ9              	100.00%		B8BZH1              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for B8BZH1 as seed ortholog is 100%.

Group of orthologs #374. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.pseudonana:296

Q75C15              	100.00%		B8C9T1              	100.00%
Bootstrap support for Q75C15 as seed ortholog is 100%.
Bootstrap support for B8C9T1 as seed ortholog is 100%.

Group of orthologs #375. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 T.pseudonana:295

Q75CI8              	100.00%		B8LCJ1              	100.00%
                    	       		B5YNF4              	26.05%
Bootstrap support for Q75CI8 as seed ortholog is 100%.
Bootstrap support for B8LCJ1 as seed ortholog is 100%.

Group of orthologs #376. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 T.pseudonana:295

Q756X5              	100.00%		B5YMX3              	100.00%
Bootstrap support for Q756X5 as seed ortholog is 100%.
Bootstrap support for B5YMX3 as seed ortholog is 100%.

Group of orthologs #377. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 T.pseudonana:152

Q75DN5              	100.00%		B8BRF3              	100.00%
Bootstrap support for Q75DN5 as seed ortholog is 100%.
Bootstrap support for B8BRF3 as seed ortholog is 99%.

Group of orthologs #378. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 T.pseudonana:295

Q753A2              	100.00%		B8C099              	100.00%
Bootstrap support for Q753A2 as seed ortholog is 100%.
Bootstrap support for B8C099 as seed ortholog is 100%.

Group of orthologs #379. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.pseudonana:132

Q75A26              	100.00%		B8BS84              	100.00%
Bootstrap support for Q75A26 as seed ortholog is 99%.
Bootstrap support for B8BS84 as seed ortholog is 100%.

Group of orthologs #380. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:293 T.pseudonana:92

Q759J2              	100.00%		B8BXF4              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for B8BXF4 as seed ortholog is 99%.

Group of orthologs #381. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:96

Q75EJ6              	100.00%		B8BZE1              	100.00%
Bootstrap support for Q75EJ6 as seed ortholog is 99%.
Bootstrap support for B8BZE1 as seed ortholog is 99%.

Group of orthologs #382. Best score 291 bits
Score difference with first non-orthologous sequence - A.gossypii:291 T.pseudonana:291

Q752C8              	100.00%		B8CCL4              	100.00%
Bootstrap support for Q752C8 as seed ortholog is 100%.
Bootstrap support for B8CCL4 as seed ortholog is 100%.

Group of orthologs #383. Best score 291 bits
Score difference with first non-orthologous sequence - A.gossypii:291 T.pseudonana:291

Q753Q6              	100.00%		B8LEX5              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 100%.
Bootstrap support for B8LEX5 as seed ortholog is 100%.

Group of orthologs #384. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:236 T.pseudonana:115

Q755R8              	100.00%		B8BVT0              	100.00%
Bootstrap support for Q755R8 as seed ortholog is 100%.
Bootstrap support for B8BVT0 as seed ortholog is 99%.

Group of orthologs #385. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 T.pseudonana:128

Q751M5              	100.00%		B8LDQ8              	100.00%
Q757J1              	24.91%		
Bootstrap support for Q751M5 as seed ortholog is 100%.
Bootstrap support for B8LDQ8 as seed ortholog is 99%.

Group of orthologs #386. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:288 T.pseudonana:40

Q758F4              	100.00%		B8BVS4              	100.00%
Q75DI5              	21.05%		
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for B8BVS4 as seed ortholog is 86%.

Group of orthologs #387. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 T.pseudonana:287

Q75EF7              	100.00%		B8BTN0              	100.00%
Bootstrap support for Q75EF7 as seed ortholog is 100%.
Bootstrap support for B8BTN0 as seed ortholog is 100%.

Group of orthologs #388. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:193

Q758V2              	100.00%		B8C277              	100.00%
Bootstrap support for Q758V2 as seed ortholog is 99%.
Bootstrap support for B8C277 as seed ortholog is 100%.

Group of orthologs #389. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 T.pseudonana:286

Q750J1              	100.00%		B8BVC6              	100.00%
Bootstrap support for Q750J1 as seed ortholog is 100%.
Bootstrap support for B8BVC6 as seed ortholog is 100%.

Group of orthologs #390. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 T.pseudonana:286

Q754W1              	100.00%		B8BSS5              	100.00%
Bootstrap support for Q754W1 as seed ortholog is 100%.
Bootstrap support for B8BSS5 as seed ortholog is 100%.

Group of orthologs #391. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 T.pseudonana:207

Q753J9              	100.00%		B8C0Q3              	100.00%
Bootstrap support for Q753J9 as seed ortholog is 100%.
Bootstrap support for B8C0Q3 as seed ortholog is 100%.

Group of orthologs #392. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:110

Q754N7              	100.00%		B8C613              	100.00%
Bootstrap support for Q754N7 as seed ortholog is 97%.
Bootstrap support for B8C613 as seed ortholog is 99%.

Group of orthologs #393. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 T.pseudonana:285

Q757D2              	100.00%		B8BU98              	100.00%
Bootstrap support for Q757D2 as seed ortholog is 100%.
Bootstrap support for B8BU98 as seed ortholog is 100%.

Group of orthologs #394. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.pseudonana:234

Q757C6              	100.00%		B8BW07              	100.00%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for B8BW07 as seed ortholog is 100%.

Group of orthologs #395. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.pseudonana:284

Q75DT8              	100.00%		B8C1C2              	100.00%
Bootstrap support for Q75DT8 as seed ortholog is 100%.
Bootstrap support for B8C1C2 as seed ortholog is 100%.

Group of orthologs #396. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.pseudonana:284

Q759R0              	100.00%		B8C9N5              	100.00%
Bootstrap support for Q759R0 as seed ortholog is 100%.
Bootstrap support for B8C9N5 as seed ortholog is 100%.

Group of orthologs #397. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.pseudonana:284

Q75DX3              	100.00%		B8C695              	100.00%
Bootstrap support for Q75DX3 as seed ortholog is 100%.
Bootstrap support for B8C695 as seed ortholog is 100%.

Group of orthologs #398. Best score 283 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:69

Q752X1              	100.00%		B8C0Y3              	100.00%
Bootstrap support for Q752X1 as seed ortholog is 99%.
Bootstrap support for B8C0Y3 as seed ortholog is 94%.

Group of orthologs #399. Best score 283 bits
Score difference with first non-orthologous sequence - A.gossypii:283 T.pseudonana:283

Q75B86              	100.00%		B8BWD4              	100.00%
Bootstrap support for Q75B86 as seed ortholog is 100%.
Bootstrap support for B8BWD4 as seed ortholog is 100%.

Group of orthologs #400. Best score 283 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.pseudonana:283

Q758T9              	100.00%		B8CCG7              	100.00%
Bootstrap support for Q758T9 as seed ortholog is 99%.
Bootstrap support for B8CCG7 as seed ortholog is 100%.

Group of orthologs #401. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.pseudonana:166

Q750R2              	100.00%		B8BYI3              	100.00%
Bootstrap support for Q750R2 as seed ortholog is 99%.
Bootstrap support for B8BYI3 as seed ortholog is 99%.

Group of orthologs #402. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.pseudonana:92

Q752Z5              	100.00%		B8BXS2              	100.00%
Bootstrap support for Q752Z5 as seed ortholog is 100%.
Bootstrap support for B8BXS2 as seed ortholog is 99%.

Group of orthologs #403. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.pseudonana:282

Q75CY6              	100.00%		B8BZK1              	100.00%
Bootstrap support for Q75CY6 as seed ortholog is 100%.
Bootstrap support for B8BZK1 as seed ortholog is 100%.

Group of orthologs #404. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 T.pseudonana:281

Q758X9              	100.00%		B8CB59              	100.00%
Bootstrap support for Q758X9 as seed ortholog is 100%.
Bootstrap support for B8CB59 as seed ortholog is 100%.

Group of orthologs #405. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 T.pseudonana:205

Q75EA0              	100.00%		B8C8V8              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for B8C8V8 as seed ortholog is 100%.

Group of orthologs #406. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 T.pseudonana:224

Q75D52              	100.00%		B8CC69              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for B8CC69 as seed ortholog is 100%.

Group of orthologs #407. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 T.pseudonana:280

Q75B75              	100.00%		B8BYF4              	100.00%
Bootstrap support for Q75B75 as seed ortholog is 100%.
Bootstrap support for B8BYF4 as seed ortholog is 100%.

Group of orthologs #408. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.pseudonana:116

Q750D4              	100.00%		B8LD59              	100.00%
Bootstrap support for Q750D4 as seed ortholog is 95%.
Bootstrap support for B8LD59 as seed ortholog is 99%.

Group of orthologs #409. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.pseudonana:132

Q751R9              	100.00%		B5YMY9              	100.00%
Bootstrap support for Q751R9 as seed ortholog is 100%.
Bootstrap support for B5YMY9 as seed ortholog is 99%.

Group of orthologs #410. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:279

Q757G9              	100.00%		B8BRT7              	100.00%
Bootstrap support for Q757G9 as seed ortholog is 97%.
Bootstrap support for B8BRT7 as seed ortholog is 100%.

Group of orthologs #411. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.pseudonana:55

Q756A3              	100.00%		B8BUM6              	100.00%
Bootstrap support for Q756A3 as seed ortholog is 100%.
Bootstrap support for B8BUM6 as seed ortholog is 88%.

Group of orthologs #412. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.pseudonana:279

Q758F8              	100.00%		B8CB01              	100.00%
Bootstrap support for Q758F8 as seed ortholog is 100%.
Bootstrap support for B8CB01 as seed ortholog is 100%.

Group of orthologs #413. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:116

Q756S0              	100.00%		B8BR30              	100.00%
Bootstrap support for Q756S0 as seed ortholog is 100%.
Bootstrap support for B8BR30 as seed ortholog is 99%.

Group of orthologs #414. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.pseudonana:277

Q751S5              	100.00%		B8C3Y2              	100.00%
Bootstrap support for Q751S5 as seed ortholog is 100%.
Bootstrap support for B8C3Y2 as seed ortholog is 100%.

Group of orthologs #415. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.pseudonana:37

Q75D02              	100.00%		B8C362              	100.00%
Bootstrap support for Q75D02 as seed ortholog is 100%.
Bootstrap support for B8C362 as seed ortholog is 93%.

Group of orthologs #416. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.pseudonana:232

Q754H4              	100.00%		B8BT16              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for B8BT16 as seed ortholog is 100%.

Group of orthologs #417. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.pseudonana:222

Q75B26              	100.00%		B8BPZ8              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for B8BPZ8 as seed ortholog is 100%.

Group of orthologs #418. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.pseudonana:209

Q75AR1              	100.00%		B8BS69              	100.00%
Bootstrap support for Q75AR1 as seed ortholog is 100%.
Bootstrap support for B8BS69 as seed ortholog is 100%.

Group of orthologs #419. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.pseudonana:275

Q75CQ9              	100.00%		B8BYG9              	100.00%
Bootstrap support for Q75CQ9 as seed ortholog is 100%.
Bootstrap support for B8BYG9 as seed ortholog is 100%.

Group of orthologs #420. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:229 T.pseudonana:188

Q754W9              	100.00%		B8CC87              	100.00%
Bootstrap support for Q754W9 as seed ortholog is 100%.
Bootstrap support for B8CC87 as seed ortholog is 100%.

Group of orthologs #421. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:111

Q755C4              	100.00%		B8LE83              	100.00%
Bootstrap support for Q755C4 as seed ortholog is 99%.
Bootstrap support for B8LE83 as seed ortholog is 99%.

Group of orthologs #422. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.pseudonana:275

Q759R5              	100.00%		B8LDW8              	100.00%
Bootstrap support for Q759R5 as seed ortholog is 100%.
Bootstrap support for B8LDW8 as seed ortholog is 100%.

Group of orthologs #423. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 T.pseudonana:32

Q759L4              	100.00%		B8LBH6              	100.00%
Q752X6              	17.87%		
Bootstrap support for Q759L4 as seed ortholog is 100%.
Bootstrap support for B8LBH6 as seed ortholog is 74%.
Alternative seed ortholog is B8LBP7 (32 bits away from this cluster)

Group of orthologs #424. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:10

Q75BM2              	100.00%		B8CDY4              	100.00%
Bootstrap support for Q75BM2 as seed ortholog is 99%.
Bootstrap support for B8CDY4 as seed ortholog is 61%.
Alternative seed ortholog is B8CFV3 (10 bits away from this cluster)

Group of orthologs #425. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 T.pseudonana:16

Q74ZE6              	100.00%		B5YMU2              	100.00%
                    	       		B8LEK0              	22.22%
Bootstrap support for Q74ZE6 as seed ortholog is 100%.
Bootstrap support for B5YMU2 as seed ortholog is 60%.
Alternative seed ortholog is B8LCA2 (16 bits away from this cluster)

Group of orthologs #426. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.pseudonana:155

Q754X6              	100.00%		B8BZX8              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 92%.
Bootstrap support for B8BZX8 as seed ortholog is 99%.

Group of orthologs #427. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 T.pseudonana:273

Q757Y2              	100.00%		B8CD36              	100.00%
Bootstrap support for Q757Y2 as seed ortholog is 100%.
Bootstrap support for B8CD36 as seed ortholog is 100%.

Group of orthologs #428. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 T.pseudonana:208

Q75CE1              	100.00%		B8CDH4              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for B8CDH4 as seed ortholog is 100%.

Group of orthologs #429. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.pseudonana:272

Q754E7              	100.00%		B8BQN6              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for B8BQN6 as seed ortholog is 100%.

Group of orthologs #430. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.pseudonana:194

Q759J7              	100.00%		B8C085              	100.00%
Bootstrap support for Q759J7 as seed ortholog is 100%.
Bootstrap support for B8C085 as seed ortholog is 100%.

Group of orthologs #431. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.pseudonana:272

Q75AK8              	100.00%		B8C4E1              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for B8C4E1 as seed ortholog is 100%.

Group of orthologs #432. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.pseudonana:33

Q75AJ9              	100.00%		B8C5X7              	100.00%
Bootstrap support for Q75AJ9 as seed ortholog is 100%.
Bootstrap support for B8C5X7 as seed ortholog is 76%.

Group of orthologs #433. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:222

Q751K4              	100.00%		B8C0J3              	100.00%
Bootstrap support for Q751K4 as seed ortholog is 98%.
Bootstrap support for B8C0J3 as seed ortholog is 99%.

Group of orthologs #434. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 T.pseudonana:270

Q75CY7              	100.00%		B8C3Y3              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for B8C3Y3 as seed ortholog is 100%.

Group of orthologs #435. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 T.pseudonana:131

Q75A66              	100.00%		B8CBL9              	100.00%
Bootstrap support for Q75A66 as seed ortholog is 100%.
Bootstrap support for B8CBL9 as seed ortholog is 98%.

Group of orthologs #436. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 T.pseudonana:269

Q75E11              	100.00%		B8C0D4              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for B8C0D4 as seed ortholog is 100%.

Group of orthologs #437. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:268 T.pseudonana:268

Q753M6              	100.00%		B8CF96              	100.00%
                    	       		B8CF92              	96.43%
Bootstrap support for Q753M6 as seed ortholog is 100%.
Bootstrap support for B8CF96 as seed ortholog is 100%.

Group of orthologs #438. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:268 T.pseudonana:268

Q757G6              	100.00%		B8C5U0              	100.00%
Bootstrap support for Q757G6 as seed ortholog is 100%.
Bootstrap support for B8C5U0 as seed ortholog is 100%.

Group of orthologs #439. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.pseudonana:192

Q759W9              	100.00%		B8C8C6              	100.00%
Bootstrap support for Q759W9 as seed ortholog is 97%.
Bootstrap support for B8C8C6 as seed ortholog is 100%.

Group of orthologs #440. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 T.pseudonana:267

Q753V8              	100.00%		B8BS57              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for B8BS57 as seed ortholog is 100%.

Group of orthologs #441. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:267

O60027              	100.00%		B8C2I2              	100.00%
Bootstrap support for O60027 as seed ortholog is 99%.
Bootstrap support for B8C2I2 as seed ortholog is 100%.

Group of orthologs #442. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:266

Q757G4              	100.00%		B8BR47              	100.00%
Bootstrap support for Q757G4 as seed ortholog is 100%.
Bootstrap support for B8BR47 as seed ortholog is 100%.

Group of orthologs #443. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:180

Q759L2              	100.00%		B8BQX0              	100.00%
Bootstrap support for Q759L2 as seed ortholog is 100%.
Bootstrap support for B8BQX0 as seed ortholog is 100%.

Group of orthologs #444. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:51

Q758S8              	100.00%		B8C2X1              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 100%.
Bootstrap support for B8C2X1 as seed ortholog is 98%.

Group of orthologs #445. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:40

Q754H5              	100.00%		B8C8B3              	100.00%
Bootstrap support for Q754H5 as seed ortholog is 100%.
Bootstrap support for B8C8B3 as seed ortholog is 91%.

Group of orthologs #446. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:266

Q753P1              	100.00%		B8CAL4              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for B8CAL4 as seed ortholog is 100%.

Group of orthologs #447. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 T.pseudonana:266

Q75DG3              	100.00%		B8CF78              	100.00%
Bootstrap support for Q75DG3 as seed ortholog is 100%.
Bootstrap support for B8CF78 as seed ortholog is 100%.

Group of orthologs #448. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 T.pseudonana:264

Q751E6              	100.00%		B8BUF1              	100.00%
Bootstrap support for Q751E6 as seed ortholog is 100%.
Bootstrap support for B8BUF1 as seed ortholog is 100%.

Group of orthologs #449. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.pseudonana:94

Q756G5              	100.00%		B8C2N1              	100.00%
Bootstrap support for Q756G5 as seed ortholog is 99%.
Bootstrap support for B8C2N1 as seed ortholog is 98%.

Group of orthologs #450. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 T.pseudonana:264

Q758H4              	100.00%		B8C677              	100.00%
Bootstrap support for Q758H4 as seed ortholog is 100%.
Bootstrap support for B8C677 as seed ortholog is 100%.

Group of orthologs #451. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:263 T.pseudonana:191

Q75AV4              	100.00%		B8CEM0              	100.00%
Bootstrap support for Q75AV4 as seed ortholog is 100%.
Bootstrap support for B8CEM0 as seed ortholog is 100%.

Group of orthologs #452. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 T.pseudonana:262

Q753D4              	100.00%		B5YNU8              	100.00%
Bootstrap support for Q753D4 as seed ortholog is 100%.
Bootstrap support for B5YNU8 as seed ortholog is 100%.

Group of orthologs #453. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 T.pseudonana:148

Q755A4              	100.00%		Q4G2T2              	100.00%
Bootstrap support for Q755A4 as seed ortholog is 100%.
Bootstrap support for Q4G2T2 as seed ortholog is 99%.

Group of orthologs #454. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.pseudonana:63

Q75B34              	100.00%		B8CBU9              	100.00%
                    	       		B8C522              	40.74%
Bootstrap support for Q75B34 as seed ortholog is 95%.
Bootstrap support for B8CBU9 as seed ortholog is 96%.

Group of orthologs #455. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.pseudonana:42

Q753W7              	100.00%		B8BSA8              	100.00%
Bootstrap support for Q753W7 as seed ortholog is 86%.
Bootstrap support for B8BSA8 as seed ortholog is 86%.

Group of orthologs #456. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.pseudonana:133

Q756T0              	100.00%		B8C0C0              	100.00%
Bootstrap support for Q756T0 as seed ortholog is 100%.
Bootstrap support for B8C0C0 as seed ortholog is 100%.

Group of orthologs #457. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 T.pseudonana:261

Q74ZS2              	100.00%		B8CG60              	100.00%
Bootstrap support for Q74ZS2 as seed ortholog is 100%.
Bootstrap support for B8CG60 as seed ortholog is 100%.

Group of orthologs #458. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:145

Q75AW1              	100.00%		B8CGH5              	100.00%
Bootstrap support for Q75AW1 as seed ortholog is 99%.
Bootstrap support for B8CGH5 as seed ortholog is 99%.

Group of orthologs #459. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 T.pseudonana:260

Q751A1              	100.00%		B8C141              	100.00%
Bootstrap support for Q751A1 as seed ortholog is 100%.
Bootstrap support for B8C141 as seed ortholog is 100%.

Group of orthologs #460. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 T.pseudonana:260

Q75CR2              	100.00%		B8C0W0              	100.00%
Bootstrap support for Q75CR2 as seed ortholog is 100%.
Bootstrap support for B8C0W0 as seed ortholog is 100%.

Group of orthologs #461. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 T.pseudonana:259

Q754Z6              	100.00%		B8BWM8              	100.00%
Bootstrap support for Q754Z6 as seed ortholog is 100%.
Bootstrap support for B8BWM8 as seed ortholog is 100%.

Group of orthologs #462. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:258

Q756X2              	100.00%		B8BYU6              	100.00%
Bootstrap support for Q756X2 as seed ortholog is 98%.
Bootstrap support for B8BYU6 as seed ortholog is 100%.

Group of orthologs #463. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:258 T.pseudonana:258

Q756X6              	100.00%		B8C388              	100.00%
Bootstrap support for Q756X6 as seed ortholog is 100%.
Bootstrap support for B8C388 as seed ortholog is 100%.

Group of orthologs #464. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:60

Q755T4              	100.00%		B5YND5              	100.00%
Bootstrap support for Q755T4 as seed ortholog is 99%.
Bootstrap support for B5YND5 as seed ortholog is 99%.

Group of orthologs #465. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:208

Q75C99              	100.00%		B8CDE4              	100.00%
Bootstrap support for Q75C99 as seed ortholog is 95%.
Bootstrap support for B8CDE4 as seed ortholog is 100%.

Group of orthologs #466. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 T.pseudonana:204

Q75ER7              	100.00%		B8BR42              	100.00%
Bootstrap support for Q75ER7 as seed ortholog is 100%.
Bootstrap support for B8BR42 as seed ortholog is 100%.

Group of orthologs #467. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 T.pseudonana:256

Q756N5              	100.00%		B8BYT2              	100.00%
Bootstrap support for Q756N5 as seed ortholog is 100%.
Bootstrap support for B8BYT2 as seed ortholog is 100%.

Group of orthologs #468. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 T.pseudonana:256

Q755A1              	100.00%		B8CAY2              	100.00%
Bootstrap support for Q755A1 as seed ortholog is 100%.
Bootstrap support for B8CAY2 as seed ortholog is 100%.

Group of orthologs #469. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 T.pseudonana:255

Q755D9              	100.00%		B8C5C3              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for B8C5C3 as seed ortholog is 100%.

Group of orthologs #470. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.pseudonana:79

Q757R6              	100.00%		B8C1D1              	100.00%
Bootstrap support for Q757R6 as seed ortholog is 82%.
Bootstrap support for B8C1D1 as seed ortholog is 96%.

Group of orthologs #471. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:30

Q758U3              	100.00%		B8CCE6              	100.00%
Bootstrap support for Q758U3 as seed ortholog is 95%.
Bootstrap support for B8CCE6 as seed ortholog is 74%.
Alternative seed ortholog is B8C9L7 (30 bits away from this cluster)

Group of orthologs #472. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:195

Q756J9              	100.00%		B8C0X9              	100.00%
Bootstrap support for Q756J9 as seed ortholog is 100%.
Bootstrap support for B8C0X9 as seed ortholog is 100%.

Group of orthologs #473. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.pseudonana:252

Q75A46              	100.00%		B5YLI9              	100.00%
Bootstrap support for Q75A46 as seed ortholog is 100%.
Bootstrap support for B5YLI9 as seed ortholog is 100%.

Group of orthologs #474. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.pseudonana:148

Q755A7              	100.00%		B8BV47              	100.00%
Bootstrap support for Q755A7 as seed ortholog is 100%.
Bootstrap support for B8BV47 as seed ortholog is 100%.

Group of orthologs #475. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.pseudonana:252

Q754S9              	100.00%		B8C750              	100.00%
Bootstrap support for Q754S9 as seed ortholog is 100%.
Bootstrap support for B8C750 as seed ortholog is 100%.

Group of orthologs #476. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:37

Q74Z01              	100.00%		B8CFL9              	100.00%
Q74Z02              	66.96%		
Bootstrap support for Q74Z01 as seed ortholog is 100%.
Bootstrap support for B8CFL9 as seed ortholog is 77%.

Group of orthologs #477. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:251

Q74ZF6              	100.00%		B8BQL7              	100.00%
Bootstrap support for Q74ZF6 as seed ortholog is 100%.
Bootstrap support for B8BQL7 as seed ortholog is 100%.

Group of orthologs #478. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:251

Q75CI9              	100.00%		B5YM44              	100.00%
Bootstrap support for Q75CI9 as seed ortholog is 100%.
Bootstrap support for B5YM44 as seed ortholog is 100%.

Group of orthologs #479. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:251

Q750K5              	100.00%		B8C4K4              	100.00%
Bootstrap support for Q750K5 as seed ortholog is 100%.
Bootstrap support for B8C4K4 as seed ortholog is 100%.

Group of orthologs #480. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:251

Q753L7              	100.00%		B8C6M7              	100.00%
Bootstrap support for Q753L7 as seed ortholog is 100%.
Bootstrap support for B8C6M7 as seed ortholog is 100%.

Group of orthologs #481. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:251

Q756Z9              	100.00%		B8C9C3              	100.00%
Bootstrap support for Q756Z9 as seed ortholog is 100%.
Bootstrap support for B8C9C3 as seed ortholog is 100%.

Group of orthologs #482. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:205

Q75BS2              	100.00%		B8CCZ8              	100.00%
Bootstrap support for Q75BS2 as seed ortholog is 100%.
Bootstrap support for B8CCZ8 as seed ortholog is 100%.

Group of orthologs #483. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.pseudonana:251

Q75CU7              	100.00%		B8CG46              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for B8CG46 as seed ortholog is 100%.

Group of orthologs #484. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.pseudonana:250

Q74Z31              	100.00%		B8CB96              	100.00%
Bootstrap support for Q74Z31 as seed ortholog is 100%.
Bootstrap support for B8CB96 as seed ortholog is 100%.

Group of orthologs #485. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.pseudonana:250

Q74ZK3              	100.00%		B8CCL8              	100.00%
Bootstrap support for Q74ZK3 as seed ortholog is 100%.
Bootstrap support for B8CCL8 as seed ortholog is 100%.

Group of orthologs #486. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 T.pseudonana:249

Q759C8              	100.00%		B8BSJ7              	100.00%
Bootstrap support for Q759C8 as seed ortholog is 100%.
Bootstrap support for B8BSJ7 as seed ortholog is 100%.

Group of orthologs #487. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 T.pseudonana:155

Q759G5              	100.00%		B8BT26              	100.00%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for B8BT26 as seed ortholog is 99%.

Group of orthologs #488. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 T.pseudonana:249

Q752X9              	100.00%		B8BXY6              	100.00%
Bootstrap support for Q752X9 as seed ortholog is 100%.
Bootstrap support for B8BXY6 as seed ortholog is 100%.

Group of orthologs #489. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 T.pseudonana:249

Q753Q1              	100.00%		B8C587              	100.00%
Bootstrap support for Q753Q1 as seed ortholog is 100%.
Bootstrap support for B8C587 as seed ortholog is 100%.

Group of orthologs #490. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 T.pseudonana:196

Q753J4              	100.00%		B8C0E7              	100.00%
Bootstrap support for Q753J4 as seed ortholog is 100%.
Bootstrap support for B8C0E7 as seed ortholog is 100%.

Group of orthologs #491. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.pseudonana:144

O60029              	100.00%		B8C6Y1              	100.00%
Bootstrap support for O60029 as seed ortholog is 100%.
Bootstrap support for B8C6Y1 as seed ortholog is 100%.

Group of orthologs #492. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 T.pseudonana:248

Q757J3              	100.00%		B8C0T2              	100.00%
Bootstrap support for Q757J3 as seed ortholog is 100%.
Bootstrap support for B8C0T2 as seed ortholog is 100%.

Group of orthologs #493. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:247 T.pseudonana:247

Q752X7              	100.00%		B8BVH8              	100.00%
Bootstrap support for Q752X7 as seed ortholog is 100%.
Bootstrap support for B8BVH8 as seed ortholog is 100%.

Group of orthologs #494. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:247 T.pseudonana:247

Q75EP8              	100.00%		B8C8T3              	100.00%
Bootstrap support for Q75EP8 as seed ortholog is 100%.
Bootstrap support for B8C8T3 as seed ortholog is 100%.

Group of orthologs #495. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:246

Q756T8              	100.00%		B8C1C1              	100.00%
                    	       		B8C1C0              	63.91%
                    	       		B8C5N4              	40.09%
Bootstrap support for Q756T8 as seed ortholog is 99%.
Bootstrap support for B8C1C1 as seed ortholog is 100%.

Group of orthologs #496. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.pseudonana:246

Q756J7              	100.00%		B8BTF6              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for B8BTF6 as seed ortholog is 100%.

Group of orthologs #497. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.pseudonana:123

Q759Q9              	100.00%		B8BYF8              	100.00%
Bootstrap support for Q759Q9 as seed ortholog is 100%.
Bootstrap support for B8BYF8 as seed ortholog is 99%.

Group of orthologs #498. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.pseudonana:246

Q75B99              	100.00%		B8C6Q4              	100.00%
Bootstrap support for Q75B99 as seed ortholog is 100%.
Bootstrap support for B8C6Q4 as seed ortholog is 100%.

Group of orthologs #499. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.pseudonana:245

Q752T4              	100.00%		B8C022              	100.00%
Q74ZA2              	12.10%		
Bootstrap support for Q752T4 as seed ortholog is 100%.
Bootstrap support for B8C022 as seed ortholog is 100%.

Group of orthologs #500. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.pseudonana:245

Q750D0              	100.00%		B8BUG3              	100.00%
Bootstrap support for Q750D0 as seed ortholog is 100%.
Bootstrap support for B8BUG3 as seed ortholog is 100%.

Group of orthologs #501. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:33

Q759X8              	100.00%		B8BVJ3              	100.00%
Bootstrap support for Q759X8 as seed ortholog is 94%.
Bootstrap support for B8BVJ3 as seed ortholog is 69%.
Alternative seed ortholog is B8BQ46 (33 bits away from this cluster)

Group of orthologs #502. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.pseudonana:198

Q758S7              	100.00%		B8BZ86              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for B8BZ86 as seed ortholog is 100%.

Group of orthologs #503. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.pseudonana:245

Q758L6              	100.00%		B8C1H2              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 100%.
Bootstrap support for B8C1H2 as seed ortholog is 100%.

Group of orthologs #504. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.pseudonana:244

Q759G6              	100.00%		B8BT93              	100.00%
Bootstrap support for Q759G6 as seed ortholog is 100%.
Bootstrap support for B8BT93 as seed ortholog is 100%.

Group of orthologs #505. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.pseudonana:244

Q756G9              	100.00%		B8BXX6              	100.00%
Bootstrap support for Q756G9 as seed ortholog is 100%.
Bootstrap support for B8BXX6 as seed ortholog is 100%.

Group of orthologs #506. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.pseudonana:167

Q759S7              	100.00%		B8C8Q5              	100.00%
Bootstrap support for Q759S7 as seed ortholog is 100%.
Bootstrap support for B8C8Q5 as seed ortholog is 99%.

Group of orthologs #507. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.pseudonana:244

Q756Y3              	100.00%		B8CET5              	100.00%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for B8CET5 as seed ortholog is 100%.

Group of orthologs #508. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.pseudonana:243

Q74Z21              	100.00%		B5YNY8              	100.00%
Bootstrap support for Q74Z21 as seed ortholog is 100%.
Bootstrap support for B5YNY8 as seed ortholog is 100%.

Group of orthologs #509. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.pseudonana:243

Q753C6              	100.00%		B8C5R0              	100.00%
Bootstrap support for Q753C6 as seed ortholog is 100%.
Bootstrap support for B8C5R0 as seed ortholog is 100%.

Group of orthologs #510. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.pseudonana:243

Q75AB0              	100.00%		B8C5H8              	100.00%
Bootstrap support for Q75AB0 as seed ortholog is 99%.
Bootstrap support for B8C5H8 as seed ortholog is 100%.

Group of orthologs #511. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.pseudonana:243

Q74ZQ3              	100.00%		B8CEM1              	100.00%
Bootstrap support for Q74ZQ3 as seed ortholog is 100%.
Bootstrap support for B8CEM1 as seed ortholog is 100%.

Group of orthologs #512. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.pseudonana:161

Q75ED1              	100.00%		B8C386              	100.00%
Bootstrap support for Q75ED1 as seed ortholog is 100%.
Bootstrap support for B8C386 as seed ortholog is 99%.

Group of orthologs #513. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.pseudonana:243

Q75D16              	100.00%		B8C5H0              	100.00%
Bootstrap support for Q75D16 as seed ortholog is 100%.
Bootstrap support for B8C5H0 as seed ortholog is 100%.

Group of orthologs #514. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:74

Q756J1              	100.00%		B8CDF6              	100.00%
Bootstrap support for Q756J1 as seed ortholog is 99%.
Bootstrap support for B8CDF6 as seed ortholog is 95%.

Group of orthologs #515. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.pseudonana:243

Q755T8              	100.00%		B8LD76              	100.00%
Bootstrap support for Q755T8 as seed ortholog is 100%.
Bootstrap support for B8LD76 as seed ortholog is 100%.

Group of orthologs #516. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.pseudonana:44

Q75C60              	100.00%		B8C354              	100.00%
                    	       		B8BZ70              	26.06%
Bootstrap support for Q75C60 as seed ortholog is 99%.
Bootstrap support for B8C354 as seed ortholog is 92%.

Group of orthologs #517. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 T.pseudonana:1

Q75DL9              	100.00%		B5YNN7              	100.00%
Bootstrap support for Q75DL9 as seed ortholog is 100%.
Bootstrap support for B5YNN7 as seed ortholog is 49%.
Alternative seed ortholog is B8C1U8 (1 bits away from this cluster)

Group of orthologs #518. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 T.pseudonana:242

Q75CA8              	100.00%		B8C2S6              	100.00%
Bootstrap support for Q75CA8 as seed ortholog is 100%.
Bootstrap support for B8C2S6 as seed ortholog is 100%.

Group of orthologs #519. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 T.pseudonana:241

Q75EF0              	100.00%		B8C032              	100.00%
Bootstrap support for Q75EF0 as seed ortholog is 100%.
Bootstrap support for B8C032 as seed ortholog is 100%.

Group of orthologs #520. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 T.pseudonana:241

Q75BJ2              	100.00%		B8C992              	100.00%
Bootstrap support for Q75BJ2 as seed ortholog is 100%.
Bootstrap support for B8C992 as seed ortholog is 100%.

Group of orthologs #521. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 T.pseudonana:84

Q753X4              	100.00%		B8LBW5              	100.00%
Bootstrap support for Q753X4 as seed ortholog is 100%.
Bootstrap support for B8LBW5 as seed ortholog is 93%.

Group of orthologs #522. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 T.pseudonana:25

Q756R4              	100.00%		B8LEN6              	100.00%
                    	       		B8BYH1              	76.84%
Bootstrap support for Q756R4 as seed ortholog is 100%.
Bootstrap support for B8LEN6 as seed ortholog is 84%.

Group of orthologs #523. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.pseudonana:240

Q759N3              	100.00%		B8BQ23              	100.00%
Bootstrap support for Q759N3 as seed ortholog is 99%.
Bootstrap support for B8BQ23 as seed ortholog is 100%.

Group of orthologs #524. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 T.pseudonana:240

Q75ER1              	100.00%		B8BRG9              	100.00%
Bootstrap support for Q75ER1 as seed ortholog is 100%.
Bootstrap support for B8BRG9 as seed ortholog is 100%.

Group of orthologs #525. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 T.pseudonana:240

Q75D62              	100.00%		B8C871              	100.00%
Bootstrap support for Q75D62 as seed ortholog is 100%.
Bootstrap support for B8C871 as seed ortholog is 100%.

Group of orthologs #526. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 T.pseudonana:160

Q75BC1              	100.00%		B8CFM9              	100.00%
Bootstrap support for Q75BC1 as seed ortholog is 100%.
Bootstrap support for B8CFM9 as seed ortholog is 100%.

Group of orthologs #527. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 T.pseudonana:239

Q75BC0              	100.00%		B8BVA9              	100.00%
Bootstrap support for Q75BC0 as seed ortholog is 100%.
Bootstrap support for B8BVA9 as seed ortholog is 100%.

Group of orthologs #528. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 T.pseudonana:238

Q74ZT0              	100.00%		B5YP93              	100.00%
Bootstrap support for Q74ZT0 as seed ortholog is 100%.
Bootstrap support for B5YP93 as seed ortholog is 100%.

Group of orthologs #529. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:104

Q752R6              	100.00%		B8BRA2              	100.00%
Bootstrap support for Q752R6 as seed ortholog is 99%.
Bootstrap support for B8BRA2 as seed ortholog is 98%.

Group of orthologs #530. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 T.pseudonana:238

Q759T6              	100.00%		B8BVN2              	100.00%
Bootstrap support for Q759T6 as seed ortholog is 100%.
Bootstrap support for B8BVN2 as seed ortholog is 100%.

Group of orthologs #531. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:120

Q751L2              	100.00%		B8CDT7              	100.00%
Bootstrap support for Q751L2 as seed ortholog is 99%.
Bootstrap support for B8CDT7 as seed ortholog is 99%.

Group of orthologs #532. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:67

Q757I6              	100.00%		B8LCS0              	100.00%
Bootstrap support for Q757I6 as seed ortholog is 97%.
Bootstrap support for B8LCS0 as seed ortholog is 85%.

Group of orthologs #533. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 T.pseudonana:51

Q75C44              	100.00%		B8C2K9              	100.00%
Q75C14              	11.57%		
Bootstrap support for Q75C44 as seed ortholog is 100%.
Bootstrap support for B8C2K9 as seed ortholog is 81%.

Group of orthologs #534. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 T.pseudonana:49

Q756K6              	100.00%		B8BVZ8              	100.00%
Bootstrap support for Q756K6 as seed ortholog is 100%.
Bootstrap support for B8BVZ8 as seed ortholog is 86%.

Group of orthologs #535. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 T.pseudonana:237

Q750Q9              	100.00%		B8CF20              	100.00%
Bootstrap support for Q750Q9 as seed ortholog is 100%.
Bootstrap support for B8CF20 as seed ortholog is 100%.

Group of orthologs #536. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 T.pseudonana:236

Q751P4              	100.00%		B8BVR7              	100.00%
Bootstrap support for Q751P4 as seed ortholog is 100%.
Bootstrap support for B8BVR7 as seed ortholog is 100%.

Group of orthologs #537. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 T.pseudonana:236

Q75B12              	100.00%		B8CD60              	100.00%
Bootstrap support for Q75B12 as seed ortholog is 100%.
Bootstrap support for B8CD60 as seed ortholog is 100%.

Group of orthologs #538. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.pseudonana:126

Q757N1              	100.00%		B5YMD6              	100.00%
                    	       		B8CC53              	56.67%
Bootstrap support for Q757N1 as seed ortholog is 100%.
Bootstrap support for B5YMD6 as seed ortholog is 100%.

Group of orthologs #539. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:164

Q759W0              	100.00%		B8BZI1              	100.00%
Bootstrap support for Q759W0 as seed ortholog is 99%.
Bootstrap support for B8BZI1 as seed ortholog is 99%.

Group of orthologs #540. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 T.pseudonana:235

Q757W4              	100.00%		B8CA74              	100.00%
Bootstrap support for Q757W4 as seed ortholog is 100%.
Bootstrap support for B8CA74 as seed ortholog is 100%.

Group of orthologs #541. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:8

Q750W6              	100.00%		B8CDT8              	100.00%
Q756U6              	12.50%		B8BVR6              	24.76%
                    	       		B8CEA3              	20.00%
                    	       		B8BW79              	6.67%
Bootstrap support for Q750W6 as seed ortholog is 99%.
Bootstrap support for B8CDT8 as seed ortholog is 65%.
Alternative seed ortholog is B8C7H9 (8 bits away from this cluster)

Group of orthologs #542. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 T.pseudonana:234

Q75AB5              	100.00%		B8CBZ4              	100.00%
Bootstrap support for Q75AB5 as seed ortholog is 100%.
Bootstrap support for B8CBZ4 as seed ortholog is 100%.

Group of orthologs #543. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:97

Q74ZE2              	100.00%		B8BY70              	100.00%
Bootstrap support for Q74ZE2 as seed ortholog is 99%.
Bootstrap support for B8BY70 as seed ortholog is 99%.

Group of orthologs #544. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.pseudonana:233

Q754R0              	100.00%		B8C717              	100.00%
Bootstrap support for Q754R0 as seed ortholog is 100%.
Bootstrap support for B8C717 as seed ortholog is 100%.

Group of orthologs #545. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 T.pseudonana:232

Q759R3              	100.00%		B8C862              	100.00%
Bootstrap support for Q759R3 as seed ortholog is 100%.
Bootstrap support for B8C862 as seed ortholog is 100%.

Group of orthologs #546. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:33 T.pseudonana:29

Q75BH1              	100.00%		B8BUZ9              	100.00%
Bootstrap support for Q75BH1 as seed ortholog is 82%.
Bootstrap support for B8BUZ9 as seed ortholog is 82%.

Group of orthologs #547. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 T.pseudonana:230

Q75EL3              	100.00%		B8C514              	100.00%
Bootstrap support for Q75EL3 as seed ortholog is 100%.
Bootstrap support for B8C514 as seed ortholog is 100%.

Group of orthologs #548. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 T.pseudonana:230

Q750H0              	100.00%		B8LDR3              	100.00%
Bootstrap support for Q750H0 as seed ortholog is 100%.
Bootstrap support for B8LDR3 as seed ortholog is 100%.

Group of orthologs #549. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 T.pseudonana:59

Q750Y8              	100.00%		B5YLS7              	100.00%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for B5YLS7 as seed ortholog is 96%.

Group of orthologs #550. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 T.pseudonana:229

Q756V5              	100.00%		B8CC80              	100.00%
Bootstrap support for Q756V5 as seed ortholog is 100%.
Bootstrap support for B8CC80 as seed ortholog is 100%.

Group of orthologs #551. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.pseudonana:228

Q75DQ2              	100.00%		B8BYU3              	100.00%
                    	       		B8C2U4              	41.51%
Bootstrap support for Q75DQ2 as seed ortholog is 100%.
Bootstrap support for B8BYU3 as seed ortholog is 100%.

Group of orthologs #552. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.pseudonana:228

Q75BL5              	100.00%		B8C918              	100.00%
Bootstrap support for Q75BL5 as seed ortholog is 100%.
Bootstrap support for B8C918 as seed ortholog is 100%.

Group of orthologs #553. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 T.pseudonana:94

Q751A4              	100.00%		B8BTT5              	100.00%
Q74Z35              	44.61%		
Q759G2              	17.04%		
Bootstrap support for Q751A4 as seed ortholog is 100%.
Bootstrap support for B8BTT5 as seed ortholog is 99%.

Group of orthologs #554. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:131

Q755D7              	100.00%		B8BUA4              	100.00%
                    	       		B8LDI9              	45.73%
Bootstrap support for Q755D7 as seed ortholog is 100%.
Bootstrap support for B8BUA4 as seed ortholog is 100%.

Group of orthologs #555. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 T.pseudonana:227

Q753K8              	100.00%		B8BXL5              	100.00%
Bootstrap support for Q753K8 as seed ortholog is 100%.
Bootstrap support for B8BXL5 as seed ortholog is 100%.

Group of orthologs #556. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:145 T.pseudonana:169

Q75C48              	100.00%		B8BWG1              	100.00%
Bootstrap support for Q75C48 as seed ortholog is 99%.
Bootstrap support for B8BWG1 as seed ortholog is 99%.

Group of orthologs #557. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 T.pseudonana:227

Q757U6              	100.00%		B8CEZ9              	100.00%
Bootstrap support for Q757U6 as seed ortholog is 100%.
Bootstrap support for B8CEZ9 as seed ortholog is 100%.

Group of orthologs #558. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 T.pseudonana:226

Q756G4              	100.00%		B8BWY8              	100.00%
Bootstrap support for Q756G4 as seed ortholog is 100%.
Bootstrap support for B8BWY8 as seed ortholog is 100%.

Group of orthologs #559. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.pseudonana:225

Q754U6              	100.00%		B8C7N3              	100.00%
                    	       		B8C4M5              	11.85%
Bootstrap support for Q754U6 as seed ortholog is 100%.
Bootstrap support for B8C7N3 as seed ortholog is 100%.

Group of orthologs #560. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.pseudonana:100

Q752E9              	100.00%		B8BYF3              	100.00%
Bootstrap support for Q752E9 as seed ortholog is 99%.
Bootstrap support for B8BYF3 as seed ortholog is 99%.

Group of orthologs #561. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.pseudonana:225

Q750I1              	100.00%		B8C0K5              	100.00%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for B8C0K5 as seed ortholog is 100%.

Group of orthologs #562. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.pseudonana:51

Q74ZI1              	100.00%		B8CE86              	100.00%
Bootstrap support for Q74ZI1 as seed ortholog is 94%.
Bootstrap support for B8CE86 as seed ortholog is 98%.

Group of orthologs #563. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.pseudonana:225

Q75EI1              	100.00%		B8C6V3              	100.00%
Bootstrap support for Q75EI1 as seed ortholog is 100%.
Bootstrap support for B8C6V3 as seed ortholog is 100%.

Group of orthologs #564. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.pseudonana:66

Q75F49              	100.00%		B8CEM2              	100.00%
Bootstrap support for Q75F49 as seed ortholog is 95%.
Bootstrap support for B8CEM2 as seed ortholog is 90%.

Group of orthologs #565. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 T.pseudonana:224

Q757K8              	100.00%		B8C3E2              	100.00%
                    	       		B8BVJ9              	10.49%
Bootstrap support for Q757K8 as seed ortholog is 100%.
Bootstrap support for B8C3E2 as seed ortholog is 100%.

Group of orthologs #566. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 T.pseudonana:224

Q75B81              	100.00%		B8BWU2              	100.00%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for B8BWU2 as seed ortholog is 100%.

Group of orthologs #567. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 T.pseudonana:224

Q751D7              	100.00%		B8LC81              	100.00%
Bootstrap support for Q751D7 as seed ortholog is 100%.
Bootstrap support for B8LC81 as seed ortholog is 100%.

Group of orthologs #568. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.pseudonana:223

Q756S9              	100.00%		B8BRW1              	100.00%
Bootstrap support for Q756S9 as seed ortholog is 100%.
Bootstrap support for B8BRW1 as seed ortholog is 100%.

Group of orthologs #569. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.pseudonana:223

Q74ZR4              	100.00%		B8CCX9              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for B8CCX9 as seed ortholog is 100%.

Group of orthologs #570. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.pseudonana:223

Q750P2              	100.00%		B8CFK7              	100.00%
Bootstrap support for Q750P2 as seed ortholog is 100%.
Bootstrap support for B8CFK7 as seed ortholog is 100%.

Group of orthologs #571. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 T.pseudonana:222

Q755M0              	100.00%		B8BYR1              	100.00%
                    	       		B8CBA7              	19.57%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for B8BYR1 as seed ortholog is 100%.

Group of orthologs #572. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:63

Q753V5              	100.00%		B8C4Y0              	100.00%
Bootstrap support for Q753V5 as seed ortholog is 97%.
Bootstrap support for B8C4Y0 as seed ortholog is 85%.

Group of orthologs #573. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 T.pseudonana:222

Q75A87              	100.00%		B8CCH8              	100.00%
Bootstrap support for Q75A87 as seed ortholog is 100%.
Bootstrap support for B8CCH8 as seed ortholog is 100%.

Group of orthologs #574. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 T.pseudonana:151

Q75D79              	100.00%		B8CF76              	100.00%
Bootstrap support for Q75D79 as seed ortholog is 100%.
Bootstrap support for B8CF76 as seed ortholog is 100%.

Group of orthologs #575. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 T.pseudonana:77

Q750C1              	100.00%		B5YM32              	100.00%
Bootstrap support for Q750C1 as seed ortholog is 100%.
Bootstrap support for B5YM32 as seed ortholog is 99%.

Group of orthologs #576. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 T.pseudonana:221

Q75EH1              	100.00%		B8C1Z7              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for B8C1Z7 as seed ortholog is 100%.

Group of orthologs #577. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:7

Q757J8              	100.00%		B8C276              	100.00%
Q756H8              	7.49%		
Bootstrap support for Q757J8 as seed ortholog is 100%.
Bootstrap support for B8C276 as seed ortholog is 57%.
Alternative seed ortholog is B8C6T9 (7 bits away from this cluster)

Group of orthologs #578. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:96

Q74ZS7              	100.00%		B8C0U9              	100.00%
Bootstrap support for Q74ZS7 as seed ortholog is 100%.
Bootstrap support for B8C0U9 as seed ortholog is 100%.

Group of orthologs #579. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:15

Q75DI8              	100.00%		B8BS90              	100.00%
Bootstrap support for Q75DI8 as seed ortholog is 100%.
Bootstrap support for B8BS90 as seed ortholog is 65%.
Alternative seed ortholog is B8BRR4 (15 bits away from this cluster)

Group of orthologs #580. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:220

Q75F11              	100.00%		B8BSL4              	100.00%
Bootstrap support for Q75F11 as seed ortholog is 100%.
Bootstrap support for B8BSL4 as seed ortholog is 100%.

Group of orthologs #581. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:220

Q756A9              	100.00%		B8CA48              	100.00%
Bootstrap support for Q756A9 as seed ortholog is 100%.
Bootstrap support for B8CA48 as seed ortholog is 100%.

Group of orthologs #582. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:220

Q75D60              	100.00%		B8C8S3              	100.00%
Bootstrap support for Q75D60 as seed ortholog is 100%.
Bootstrap support for B8C8S3 as seed ortholog is 100%.

Group of orthologs #583. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:220

Q75D31              	100.00%		B8LBG3              	100.00%
Bootstrap support for Q75D31 as seed ortholog is 100%.
Bootstrap support for B8LBG3 as seed ortholog is 100%.

Group of orthologs #584. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.pseudonana:126

Q75EG2              	100.00%		B8LCN6              	100.00%
Bootstrap support for Q75EG2 as seed ortholog is 100%.
Bootstrap support for B8LCN6 as seed ortholog is 99%.

Group of orthologs #585. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 T.pseudonana:154

Q758E0              	100.00%		B8BQ71              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for B8BQ71 as seed ortholog is 100%.

Group of orthologs #586. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:21

Q750L3              	100.00%		B8BY77              	100.00%
Bootstrap support for Q750L3 as seed ortholog is 100%.
Bootstrap support for B8BY77 as seed ortholog is 81%.

Group of orthologs #587. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.pseudonana:218

Q758D0              	100.00%		B5YM86              	100.00%
Bootstrap support for Q758D0 as seed ortholog is 100%.
Bootstrap support for B5YM86 as seed ortholog is 100%.

Group of orthologs #588. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.pseudonana:218

Q75DU1              	100.00%		B8C038              	100.00%
Bootstrap support for Q75DU1 as seed ortholog is 100%.
Bootstrap support for B8C038 as seed ortholog is 100%.

Group of orthologs #589. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.pseudonana:141

Q75F44              	100.00%		B8C5E9              	100.00%
Bootstrap support for Q75F44 as seed ortholog is 100%.
Bootstrap support for B8C5E9 as seed ortholog is 99%.

Group of orthologs #590. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.pseudonana:120

Q752I6              	100.00%		B8C757              	100.00%
                    	       		B8BWX9              	5.06%
Bootstrap support for Q752I6 as seed ortholog is 100%.
Bootstrap support for B8C757 as seed ortholog is 99%.

Group of orthologs #591. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.pseudonana:217

Q759H9              	100.00%		B5YND7              	100.00%
Bootstrap support for Q759H9 as seed ortholog is 100%.
Bootstrap support for B5YND7 as seed ortholog is 100%.

Group of orthologs #592. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.pseudonana:217

Q75CQ6              	100.00%		B8C307              	100.00%
Bootstrap support for Q75CQ6 as seed ortholog is 100%.
Bootstrap support for B8C307 as seed ortholog is 100%.

Group of orthologs #593. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 T.pseudonana:216

Q74Z71              	100.00%		B8BTH5              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for B8BTH5 as seed ortholog is 100%.

Group of orthologs #594. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 T.pseudonana:216

Q751A8              	100.00%		B8C272              	100.00%
Bootstrap support for Q751A8 as seed ortholog is 100%.
Bootstrap support for B8C272 as seed ortholog is 100%.

Group of orthologs #595. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:38 T.pseudonana:215

Q75AG7              	100.00%		B8BQ40              	100.00%
                    	       		B8CER2              	10.95%
Bootstrap support for Q75AG7 as seed ortholog is 80%.
Bootstrap support for B8BQ40 as seed ortholog is 100%.

Group of orthologs #596. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.pseudonana:215

Q758S4              	100.00%		B8BRD1              	100.00%
Bootstrap support for Q758S4 as seed ortholog is 100%.
Bootstrap support for B8BRD1 as seed ortholog is 100%.

Group of orthologs #597. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.pseudonana:215

Q75C63              	100.00%		B8BRL3              	100.00%
Bootstrap support for Q75C63 as seed ortholog is 100%.
Bootstrap support for B8BRL3 as seed ortholog is 100%.

Group of orthologs #598. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.pseudonana:89

Q75F88              	100.00%		B8BZW7              	100.00%
Bootstrap support for Q75F88 as seed ortholog is 100%.
Bootstrap support for B8BZW7 as seed ortholog is 99%.

Group of orthologs #599. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.pseudonana:215

Q757G2              	100.00%		B8CAZ6              	100.00%
Bootstrap support for Q757G2 as seed ortholog is 100%.
Bootstrap support for B8CAZ6 as seed ortholog is 100%.

Group of orthologs #600. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.pseudonana:215

Q758U0              	100.00%		B8CGL5              	100.00%
Bootstrap support for Q758U0 as seed ortholog is 100%.
Bootstrap support for B8CGL5 as seed ortholog is 100%.

Group of orthologs #601. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.pseudonana:214

Q74ZW4              	100.00%		B5YMM5              	100.00%
Bootstrap support for Q74ZW4 as seed ortholog is 100%.
Bootstrap support for B5YMM5 as seed ortholog is 100%.

Group of orthologs #602. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.pseudonana:44

Q750E3              	100.00%		B8BUL0              	100.00%
Bootstrap support for Q750E3 as seed ortholog is 95%.
Bootstrap support for B8BUL0 as seed ortholog is 84%.

Group of orthologs #603. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.pseudonana:159

Q758X7              	100.00%		B8BSH2              	100.00%
Bootstrap support for Q758X7 as seed ortholog is 100%.
Bootstrap support for B8BSH2 as seed ortholog is 100%.

Group of orthologs #604. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.pseudonana:214

Q759A8              	100.00%		B8BXL1              	100.00%
Bootstrap support for Q759A8 as seed ortholog is 100%.
Bootstrap support for B8BXL1 as seed ortholog is 100%.

Group of orthologs #605. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.pseudonana:214

Q750N9              	100.00%		B8LCY9              	100.00%
Bootstrap support for Q750N9 as seed ortholog is 100%.
Bootstrap support for B8LCY9 as seed ortholog is 100%.

Group of orthologs #606. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:60

Q74ZL1              	100.00%		B8BTZ3              	100.00%
Bootstrap support for Q74ZL1 as seed ortholog is 99%.
Bootstrap support for B8BTZ3 as seed ortholog is 98%.

Group of orthologs #607. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:213

Q75AQ1              	100.00%		B5YNP5              	100.00%
Bootstrap support for Q75AQ1 as seed ortholog is 100%.
Bootstrap support for B5YNP5 as seed ortholog is 100%.

Group of orthologs #608. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:73

Q756F8              	100.00%		B8C458              	100.00%
Bootstrap support for Q756F8 as seed ortholog is 100%.
Bootstrap support for B8C458 as seed ortholog is 96%.

Group of orthologs #609. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:160

Q758K0              	100.00%		B8CE06              	100.00%
Bootstrap support for Q758K0 as seed ortholog is 100%.
Bootstrap support for B8CE06 as seed ortholog is 100%.

Group of orthologs #610. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:54

Q753Z3              	100.00%		B8LC16              	100.00%
Bootstrap support for Q753Z3 as seed ortholog is 100%.
Bootstrap support for B8LC16 as seed ortholog is 88%.

Group of orthologs #611. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:139

Q75C20              	100.00%		B8CBT0              	100.00%
Bootstrap support for Q75C20 as seed ortholog is 100%.
Bootstrap support for B8CBT0 as seed ortholog is 99%.

Group of orthologs #612. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:107

Q75EB8              	100.00%		B8CAB3              	100.00%
Bootstrap support for Q75EB8 as seed ortholog is 100%.
Bootstrap support for B8CAB3 as seed ortholog is 100%.

Group of orthologs #613. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:213

Q75ES9              	100.00%		B8CDN4              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for B8CDN4 as seed ortholog is 100%.

Group of orthologs #614. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.pseudonana:89

Q75D05              	100.00%		B8LDK1              	100.00%
Bootstrap support for Q75D05 as seed ortholog is 100%.
Bootstrap support for B8LDK1 as seed ortholog is 99%.

Group of orthologs #615. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.pseudonana:68

Q750H1              	100.00%		B8C6L3              	100.00%
                    	       		B5YNI0              	20.11%
Bootstrap support for Q750H1 as seed ortholog is 99%.
Bootstrap support for B8C6L3 as seed ortholog is 98%.

Group of orthologs #616. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.pseudonana:212

Q75EB1              	100.00%		B5YLN8              	100.00%
Bootstrap support for Q75EB1 as seed ortholog is 100%.
Bootstrap support for B5YLN8 as seed ortholog is 100%.

Group of orthologs #617. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.pseudonana:212

Q757S9              	100.00%		B8BX01              	100.00%
Bootstrap support for Q757S9 as seed ortholog is 100%.
Bootstrap support for B8BX01 as seed ortholog is 100%.

Group of orthologs #618. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.pseudonana:212

Q75BA5              	100.00%		B8C741              	100.00%
Bootstrap support for Q75BA5 as seed ortholog is 100%.
Bootstrap support for B8C741 as seed ortholog is 100%.

Group of orthologs #619. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 T.pseudonana:211

Q750J7              	100.00%		B8C5B3              	100.00%
Bootstrap support for Q750J7 as seed ortholog is 100%.
Bootstrap support for B8C5B3 as seed ortholog is 100%.

Group of orthologs #620. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 T.pseudonana:211

Q75C28              	100.00%		B8BXV3              	100.00%
Bootstrap support for Q75C28 as seed ortholog is 100%.
Bootstrap support for B8BXV3 as seed ortholog is 100%.

Group of orthologs #621. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:14 T.pseudonana:22

Q75ES0              	100.00%		B8C8L4              	100.00%
                    	       		B8C8P4              	29.41%
                    	       		B8C2P8              	26.05%
                    	       		B8C2S1              	21.85%
                    	       		B8C8R1              	14.71%
                    	       		B8LCE7              	5.25%
Bootstrap support for Q75ES0 as seed ortholog is 67%.
Alternative seed ortholog is Q755K5 (14 bits away from this cluster)
Bootstrap support for B8C8L4 as seed ortholog is 75%.

Group of orthologs #622. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.pseudonana:210

Q75B74              	100.00%		B8CBB0              	100.00%
                    	       		B8CBA1              	99.44%
Bootstrap support for Q75B74 as seed ortholog is 100%.
Bootstrap support for B8CBB0 as seed ortholog is 100%.

Group of orthologs #623. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.pseudonana:210

Q75BF4              	100.00%		B8BRK5              	100.00%
Bootstrap support for Q75BF4 as seed ortholog is 100%.
Bootstrap support for B8BRK5 as seed ortholog is 100%.

Group of orthologs #624. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.pseudonana:59

Q751Z8              	100.00%		B8C6G1              	100.00%
Bootstrap support for Q751Z8 as seed ortholog is 100%.
Bootstrap support for B8C6G1 as seed ortholog is 93%.

Group of orthologs #625. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.pseudonana:6

Q750Z7              	100.00%		B8CAQ1              	100.00%
Bootstrap support for Q750Z7 as seed ortholog is 100%.
Bootstrap support for B8CAQ1 as seed ortholog is 55%.
Alternative seed ortholog is B8BTK9 (6 bits away from this cluster)

Group of orthologs #626. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.pseudonana:75

Q75AL3              	100.00%		B8C772              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for B8C772 as seed ortholog is 94%.

Group of orthologs #627. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.pseudonana:73

Q75E54              	100.00%		B8LDT0              	100.00%
Bootstrap support for Q75E54 as seed ortholog is 100%.
Bootstrap support for B8LDT0 as seed ortholog is 98%.

Group of orthologs #628. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:134

Q757F7              	100.00%		B8BY49              	100.00%
Bootstrap support for Q757F7 as seed ortholog is 100%.
Bootstrap support for B8BY49 as seed ortholog is 100%.

Group of orthologs #629. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 T.pseudonana:209

Q75D71              	100.00%		B8BT92              	100.00%
Bootstrap support for Q75D71 as seed ortholog is 100%.
Bootstrap support for B8BT92 as seed ortholog is 100%.

Group of orthologs #630. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:9

Q75CM6              	100.00%		B8BUH4              	100.00%
Bootstrap support for Q75CM6 as seed ortholog is 99%.
Bootstrap support for B8BUH4 as seed ortholog is 61%.
Alternative seed ortholog is B5YLL9 (9 bits away from this cluster)

Group of orthologs #631. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.pseudonana:73

Q756U4              	100.00%		B8C4H3              	100.00%
Bootstrap support for Q756U4 as seed ortholog is 99%.
Bootstrap support for B8C4H3 as seed ortholog is 95%.

Group of orthologs #632. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:208

Q75BX7              	100.00%		B8C847              	100.00%
Q75BX8              	8.94%		B8C7E4              	16.36%
Q74Z00              	7.15%		
Bootstrap support for Q75BX7 as seed ortholog is 99%.
Bootstrap support for B8C847 as seed ortholog is 100%.

Group of orthologs #633. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:161

Q758V7              	100.00%		B8BQI8              	100.00%
Bootstrap support for Q758V7 as seed ortholog is 100%.
Bootstrap support for B8BQI8 as seed ortholog is 99%.

Group of orthologs #634. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:208

Q75CI3              	100.00%		B8BR64              	100.00%
Bootstrap support for Q75CI3 as seed ortholog is 100%.
Bootstrap support for B8BR64 as seed ortholog is 100%.

Group of orthologs #635. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.pseudonana:208

Q758I6              	100.00%		B8BXQ9              	100.00%
Bootstrap support for Q758I6 as seed ortholog is 99%.
Bootstrap support for B8BXQ9 as seed ortholog is 100%.

Group of orthologs #636. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:208

Q751N3              	100.00%		B8C5K1              	100.00%
Bootstrap support for Q751N3 as seed ortholog is 100%.
Bootstrap support for B8C5K1 as seed ortholog is 100%.

Group of orthologs #637. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:208

Q75E36              	100.00%		B8BWB8              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for B8BWB8 as seed ortholog is 100%.

Group of orthologs #638. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:146

Q75CV6              	100.00%		B8C1M9              	100.00%
Bootstrap support for Q75CV6 as seed ortholog is 100%.
Bootstrap support for B8C1M9 as seed ortholog is 99%.

Group of orthologs #639. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:208

Q75AX9              	100.00%		B8C934              	100.00%
Bootstrap support for Q75AX9 as seed ortholog is 100%.
Bootstrap support for B8C934 as seed ortholog is 100%.

Group of orthologs #640. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.pseudonana:208

Q757N7              	100.00%		B8LD57              	100.00%
Bootstrap support for Q757N7 as seed ortholog is 100%.
Bootstrap support for B8LD57 as seed ortholog is 100%.

Group of orthologs #641. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.pseudonana:37

Q8J1G7              	100.00%		B8CCG0              	100.00%
Q8J1G4              	11.42%		
Bootstrap support for Q8J1G7 as seed ortholog is 100%.
Bootstrap support for B8CCG0 as seed ortholog is 77%.

Group of orthologs #642. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.pseudonana:207

Q756S5              	100.00%		B8BVM9              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for B8BVM9 as seed ortholog is 100%.

Group of orthologs #643. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.pseudonana:207

Q74ZK8              	100.00%		B8C5P6              	100.00%
Bootstrap support for Q74ZK8 as seed ortholog is 100%.
Bootstrap support for B8C5P6 as seed ortholog is 100%.

Group of orthologs #644. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.pseudonana:207

Q75DL7              	100.00%		B8C428              	100.00%
Bootstrap support for Q75DL7 as seed ortholog is 100%.
Bootstrap support for B8C428 as seed ortholog is 100%.

Group of orthologs #645. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.pseudonana:207

Q75CE4              	100.00%		B8CD76              	100.00%
Bootstrap support for Q75CE4 as seed ortholog is 100%.
Bootstrap support for B8CD76 as seed ortholog is 100%.

Group of orthologs #646. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.pseudonana:206

Q755C7              	100.00%		B8BPY5              	100.00%
Bootstrap support for Q755C7 as seed ortholog is 100%.
Bootstrap support for B8BPY5 as seed ortholog is 100%.

Group of orthologs #647. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.pseudonana:206

Q75AP1              	100.00%		B8CDV9              	100.00%
Bootstrap support for Q75AP1 as seed ortholog is 100%.
Bootstrap support for B8CDV9 as seed ortholog is 100%.

Group of orthologs #648. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.pseudonana:205

Q756A0              	100.00%		B8C0R3              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for B8C0R3 as seed ortholog is 100%.

Group of orthologs #649. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.pseudonana:205

Q75A91              	100.00%		B8C216              	100.00%
Bootstrap support for Q75A91 as seed ortholog is 100%.
Bootstrap support for B8C216 as seed ortholog is 100%.

Group of orthologs #650. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.pseudonana:20

Q75DD1              	100.00%		B8C642              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for B8C642 as seed ortholog is 82%.

Group of orthologs #651. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.pseudonana:91

Q754V5              	100.00%		B8C4A5              	100.00%
                    	       		B8BXU0              	36.40%
Bootstrap support for Q754V5 as seed ortholog is 93%.
Bootstrap support for B8C4A5 as seed ortholog is 98%.

Group of orthologs #652. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.pseudonana:204

Q75BR9              	100.00%		B5YLT8              	100.00%
Bootstrap support for Q75BR9 as seed ortholog is 100%.
Bootstrap support for B5YLT8 as seed ortholog is 100%.

Group of orthologs #653. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.pseudonana:204

Q75EE7              	100.00%		B8BTS3              	100.00%
Bootstrap support for Q75EE7 as seed ortholog is 100%.
Bootstrap support for B8BTS3 as seed ortholog is 100%.

Group of orthologs #654. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.pseudonana:204

Q75BY4              	100.00%		B8BZV6              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for B8BZV6 as seed ortholog is 100%.

Group of orthologs #655. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 T.pseudonana:203

Q759D9              	100.00%		B8C051              	100.00%
Bootstrap support for Q759D9 as seed ortholog is 100%.
Bootstrap support for B8C051 as seed ortholog is 100%.

Group of orthologs #656. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 T.pseudonana:203

Q751K5              	100.00%		B8C606              	100.00%
Bootstrap support for Q751K5 as seed ortholog is 100%.
Bootstrap support for B8C606 as seed ortholog is 100%.

Group of orthologs #657. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:202 T.pseudonana:6

Q75B56              	100.00%		B8BY57              	100.00%
Bootstrap support for Q75B56 as seed ortholog is 100%.
Bootstrap support for B8BY57 as seed ortholog is 34%.
Alternative seed ortholog is B8C291 (6 bits away from this cluster)

Group of orthologs #658. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.pseudonana:32

Q758C2              	100.00%		B8C2D3              	100.00%
Bootstrap support for Q758C2 as seed ortholog is 100%.
Bootstrap support for B8C2D3 as seed ortholog is 75%.

Group of orthologs #659. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.pseudonana:201

Q75BI7              	100.00%		B8C7A9              	100.00%
Bootstrap support for Q75BI7 as seed ortholog is 100%.
Bootstrap support for B8C7A9 as seed ortholog is 100%.

Group of orthologs #660. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.pseudonana:201

Q757A4              	100.00%		B8CBU5              	100.00%
Bootstrap support for Q757A4 as seed ortholog is 100%.
Bootstrap support for B8CBU5 as seed ortholog is 100%.

Group of orthologs #661. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.pseudonana:144

Q756F0              	100.00%		B8BTA9              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 100%.
Bootstrap support for B8BTA9 as seed ortholog is 100%.

Group of orthologs #662. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.pseudonana:200

Q755M8              	100.00%		B8BYB4              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for B8BYB4 as seed ortholog is 100%.

Group of orthologs #663. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.pseudonana:200

Q751Q9              	100.00%		B8C3R6              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for B8C3R6 as seed ortholog is 100%.

Group of orthologs #664. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 T.pseudonana:199

Q759P4              	100.00%		B8BZF9              	100.00%
Bootstrap support for Q759P4 as seed ortholog is 100%.
Bootstrap support for B8BZF9 as seed ortholog is 100%.

Group of orthologs #665. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.pseudonana:199

Q75BY1              	100.00%		B8C3L4              	100.00%
Bootstrap support for Q75BY1 as seed ortholog is 91%.
Bootstrap support for B8C3L4 as seed ortholog is 100%.

Group of orthologs #666. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:198

Q75EP7              	100.00%		B8BVV1              	100.00%
Q75ER3              	15.48%		
Bootstrap support for Q75EP7 as seed ortholog is 100%.
Bootstrap support for B8BVV1 as seed ortholog is 100%.

Group of orthologs #667. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:198

Q751U6              	100.00%		B5YN27              	100.00%
Bootstrap support for Q751U6 as seed ortholog is 100%.
Bootstrap support for B5YN27 as seed ortholog is 100%.

Group of orthologs #668. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:198

Q75B62              	100.00%		B8BVQ0              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for B8BVQ0 as seed ortholog is 100%.

Group of orthologs #669. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:198

Q75BB3              	100.00%		B8C0S0              	100.00%
Bootstrap support for Q75BB3 as seed ortholog is 100%.
Bootstrap support for B8C0S0 as seed ortholog is 100%.

Group of orthologs #670. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:198

Q75BD8              	100.00%		B8CCN0              	100.00%
Bootstrap support for Q75BD8 as seed ortholog is 100%.
Bootstrap support for B8CCN0 as seed ortholog is 100%.

Group of orthologs #671. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:96

Q75F07              	100.00%		B8CBU3              	100.00%
Bootstrap support for Q75F07 as seed ortholog is 100%.
Bootstrap support for B8CBU3 as seed ortholog is 99%.

Group of orthologs #672. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.pseudonana:198

Q75D59              	100.00%		B8CE75              	100.00%
Bootstrap support for Q75D59 as seed ortholog is 100%.
Bootstrap support for B8CE75 as seed ortholog is 100%.

Group of orthologs #673. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.pseudonana:197

Q756H6              	100.00%		B8CB34              	100.00%
Bootstrap support for Q756H6 as seed ortholog is 100%.
Bootstrap support for B8CB34 as seed ortholog is 100%.

Group of orthologs #674. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.pseudonana:197

Q752U1              	100.00%		B8LCA1              	100.00%
Bootstrap support for Q752U1 as seed ortholog is 100%.
Bootstrap support for B8LCA1 as seed ortholog is 100%.

Group of orthologs #675. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 T.pseudonana:196

Q75F45              	100.00%		B8BYL6              	100.00%
Bootstrap support for Q75F45 as seed ortholog is 100%.
Bootstrap support for B8BYL6 as seed ortholog is 100%.

Group of orthologs #676. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:35

Q751V1              	100.00%		B8CB28              	100.00%
Bootstrap support for Q751V1 as seed ortholog is 95%.
Bootstrap support for B8CB28 as seed ortholog is 85%.

Group of orthologs #677. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.pseudonana:85

Q75AX5              	100.00%		B8BQ89              	100.00%
Q751J1              	12.01%		
Bootstrap support for Q75AX5 as seed ortholog is 100%.
Bootstrap support for B8BQ89 as seed ortholog is 95%.

Group of orthologs #678. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.pseudonana:5

Q74ZI0              	100.00%		B8BUS3              	100.00%
Bootstrap support for Q74ZI0 as seed ortholog is 100%.
Bootstrap support for B8BUS3 as seed ortholog is 54%.
Alternative seed ortholog is B8LC46 (5 bits away from this cluster)

Group of orthologs #679. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.pseudonana:76

Q754F1              	100.00%		B8BVE1              	100.00%
Bootstrap support for Q754F1 as seed ortholog is 100%.
Bootstrap support for B8BVE1 as seed ortholog is 97%.

Group of orthologs #680. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.pseudonana:195

Q75D56              	100.00%		B8BTH4              	100.00%
Bootstrap support for Q75D56 as seed ortholog is 100%.
Bootstrap support for B8BTH4 as seed ortholog is 100%.

Group of orthologs #681. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.pseudonana:195

Q752J5              	100.00%		B8C8U6              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for B8C8U6 as seed ortholog is 100%.

Group of orthologs #682. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:60

Q75BA4              	100.00%		B5YMJ6              	100.00%
Bootstrap support for Q75BA4 as seed ortholog is 100%.
Bootstrap support for B5YMJ6 as seed ortholog is 99%.

Group of orthologs #683. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.pseudonana:193

Q75EF3              	100.00%		A0T0X5              	100.00%
Bootstrap support for Q75EF3 as seed ortholog is 100%.
Bootstrap support for A0T0X5 as seed ortholog is 100%.

Group of orthologs #684. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.pseudonana:193

Q750X2              	100.00%		B8C249              	100.00%
Bootstrap support for Q750X2 as seed ortholog is 100%.
Bootstrap support for B8C249 as seed ortholog is 100%.

Group of orthologs #685. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.pseudonana:193

Q756J5              	100.00%		B8BZ39              	100.00%
Bootstrap support for Q756J5 as seed ortholog is 100%.
Bootstrap support for B8BZ39 as seed ortholog is 100%.

Group of orthologs #686. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.pseudonana:193

Q75CN5              	100.00%		B8CG67              	100.00%
Bootstrap support for Q75CN5 as seed ortholog is 100%.
Bootstrap support for B8CG67 as seed ortholog is 100%.

Group of orthologs #687. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.pseudonana:41

Q756F7              	100.00%		B8BXT9              	100.00%
                    	       		B8LCC1              	17.88%
Bootstrap support for Q756F7 as seed ortholog is 100%.
Bootstrap support for B8BXT9 as seed ortholog is 93%.

Group of orthologs #688. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.pseudonana:192

Q750E0              	100.00%		B8C2D0              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for B8C2D0 as seed ortholog is 100%.

Group of orthologs #689. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:6 T.pseudonana:43

Q75CK3              	100.00%		B8BUG2              	100.00%
Bootstrap support for Q75CK3 as seed ortholog is 42%.
Alternative seed ortholog is Q75F92 (6 bits away from this cluster)
Bootstrap support for B8BUG2 as seed ortholog is 95%.

Group of orthologs #690. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.pseudonana:192

Q75A48              	100.00%		B8BXK1              	100.00%
Bootstrap support for Q75A48 as seed ortholog is 100%.
Bootstrap support for B8BXK1 as seed ortholog is 100%.

Group of orthologs #691. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.pseudonana:192

Q759L8              	100.00%		B8BZD7              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for B8BZD7 as seed ortholog is 100%.

Group of orthologs #692. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.pseudonana:70

Q74Z34              	100.00%		B5YN48              	100.00%
Bootstrap support for Q74Z34 as seed ortholog is 100%.
Bootstrap support for B5YN48 as seed ortholog is 99%.

Group of orthologs #693. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.pseudonana:191

Q756E7              	100.00%		B8BQU9              	100.00%
Bootstrap support for Q756E7 as seed ortholog is 100%.
Bootstrap support for B8BQU9 as seed ortholog is 100%.

Group of orthologs #694. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.pseudonana:191

Q750M3              	100.00%		B8C529              	100.00%
Bootstrap support for Q750M3 as seed ortholog is 100%.
Bootstrap support for B8C529 as seed ortholog is 100%.

Group of orthologs #695. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.pseudonana:191

Q750D2              	100.00%		B8C5R3              	100.00%
Bootstrap support for Q750D2 as seed ortholog is 100%.
Bootstrap support for B8C5R3 as seed ortholog is 100%.

Group of orthologs #696. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.pseudonana:191

Q74ZU0              	100.00%		B8CBI5              	100.00%
Bootstrap support for Q74ZU0 as seed ortholog is 100%.
Bootstrap support for B8CBI5 as seed ortholog is 100%.

Group of orthologs #697. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:62

Q75B41              	100.00%		B8C521              	100.00%
Bootstrap support for Q75B41 as seed ortholog is 98%.
Bootstrap support for B8C521 as seed ortholog is 94%.

Group of orthologs #698. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.pseudonana:190

Q75AX1              	100.00%		B5YMD7              	100.00%
Q757K0              	100.00%		
Bootstrap support for Q75AX1 as seed ortholog is 100%.
Bootstrap support for Q757K0 as seed ortholog is 100%.
Bootstrap support for B5YMD7 as seed ortholog is 100%.

Group of orthologs #699. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.pseudonana:190

Q752Z8              	100.00%		B8BS53              	100.00%
Bootstrap support for Q752Z8 as seed ortholog is 100%.
Bootstrap support for B8BS53 as seed ortholog is 100%.

Group of orthologs #700. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.pseudonana:190

Q75BS3              	100.00%		B8C8W1              	100.00%
Bootstrap support for Q75BS3 as seed ortholog is 100%.
Bootstrap support for B8C8W1 as seed ortholog is 100%.

Group of orthologs #701. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.pseudonana:190

Q754J0              	100.00%		B8CFP0              	100.00%
Bootstrap support for Q754J0 as seed ortholog is 100%.
Bootstrap support for B8CFP0 as seed ortholog is 100%.

Group of orthologs #702. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.pseudonana:92

Q758L4              	100.00%		B8BVH0              	100.00%
Bootstrap support for Q758L4 as seed ortholog is 99%.
Bootstrap support for B8BVH0 as seed ortholog is 99%.

Group of orthologs #703. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.pseudonana:189

Q75EW8              	100.00%		B8BQF8              	100.00%
Bootstrap support for Q75EW8 as seed ortholog is 100%.
Bootstrap support for B8BQF8 as seed ortholog is 100%.

Group of orthologs #704. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.pseudonana:189

Q757T2              	100.00%		B8C5H7              	100.00%
Bootstrap support for Q757T2 as seed ortholog is 100%.
Bootstrap support for B8C5H7 as seed ortholog is 100%.

Group of orthologs #705. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.pseudonana:189

Q755I0              	100.00%		B8CBP2              	100.00%
Bootstrap support for Q755I0 as seed ortholog is 100%.
Bootstrap support for B8CBP2 as seed ortholog is 100%.

Group of orthologs #706. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.pseudonana:189

Q75DR0              	100.00%		B8C6R4              	100.00%
Bootstrap support for Q75DR0 as seed ortholog is 100%.
Bootstrap support for B8C6R4 as seed ortholog is 100%.

Group of orthologs #707. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.pseudonana:188

Q75D84              	100.00%		B5YN70              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for B5YN70 as seed ortholog is 100%.

Group of orthologs #708. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.pseudonana:188

Q75EK1              	100.00%		B5YM77              	100.00%
Bootstrap support for Q75EK1 as seed ortholog is 99%.
Bootstrap support for B5YM77 as seed ortholog is 100%.

Group of orthologs #709. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.pseudonana:188

Q75E55              	100.00%		B8BXY1              	100.00%
Bootstrap support for Q75E55 as seed ortholog is 100%.
Bootstrap support for B8BXY1 as seed ortholog is 100%.

Group of orthologs #710. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:23 T.pseudonana:23

Q75C30              	100.00%		B8CEY5              	100.00%
Bootstrap support for Q75C30 as seed ortholog is 72%.
Alternative seed ortholog is Q74ZN5 (23 bits away from this cluster)
Bootstrap support for B8CEY5 as seed ortholog is 75%.

Group of orthologs #711. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.pseudonana:187

Q753V1              	100.00%		B8CCF6              	100.00%
Q75C79              	37.47%		
Q75AS9              	30.52%		
Bootstrap support for Q753V1 as seed ortholog is 100%.
Bootstrap support for B8CCF6 as seed ortholog is 100%.

Group of orthologs #712. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.pseudonana:80

Q75A51              	100.00%		B8BZ02              	100.00%
                    	       		B8BZ00              	26.90%
Bootstrap support for Q75A51 as seed ortholog is 100%.
Bootstrap support for B8BZ02 as seed ortholog is 99%.

Group of orthologs #713. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.pseudonana:187

Q75A30              	100.00%		B8C4Z7              	100.00%
Bootstrap support for Q75A30 as seed ortholog is 100%.
Bootstrap support for B8C4Z7 as seed ortholog is 100%.

Group of orthologs #714. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.pseudonana:187

Q753N0              	100.00%		B8C9Z7              	100.00%
Bootstrap support for Q753N0 as seed ortholog is 100%.
Bootstrap support for B8C9Z7 as seed ortholog is 100%.

Group of orthologs #715. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:3 T.pseudonana:51

Q757T6              	100.00%		B8BTR9              	100.00%
                    	       		B8LCT5              	7.97%
Bootstrap support for Q757T6 as seed ortholog is 56%.
Alternative seed ortholog is Q755G4 (3 bits away from this cluster)
Bootstrap support for B8BTR9 as seed ortholog is 98%.

Group of orthologs #716. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 T.pseudonana:186

Q75EC1              	100.00%		B8C1K5              	100.00%
Q75F06              	6.96%		
Bootstrap support for Q75EC1 as seed ortholog is 100%.
Bootstrap support for B8C1K5 as seed ortholog is 100%.

Group of orthologs #717. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 T.pseudonana:186

Q754V6              	100.00%		B8BVY6              	100.00%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for B8BVY6 as seed ortholog is 100%.

Group of orthologs #718. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 T.pseudonana:112

Q75E05              	100.00%		B8C1Z1              	100.00%
Bootstrap support for Q75E05 as seed ortholog is 100%.
Bootstrap support for B8C1Z1 as seed ortholog is 99%.

Group of orthologs #719. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.pseudonana:186

Q750E7              	100.00%		B8LDI3              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 98%.
Bootstrap support for B8LDI3 as seed ortholog is 100%.

Group of orthologs #720. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.pseudonana:30

Q75C65              	100.00%		B8C0X4              	100.00%
Q755Y7              	18.12%		
Bootstrap support for Q75C65 as seed ortholog is 100%.
Bootstrap support for B8C0X4 as seed ortholog is 79%.

Group of orthologs #721. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.pseudonana:83

Q759V3              	100.00%		B5YM29              	100.00%
Bootstrap support for Q759V3 as seed ortholog is 99%.
Bootstrap support for B5YM29 as seed ortholog is 99%.

Group of orthologs #722. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.pseudonana:185

Q757V5              	100.00%		B8BQI2              	100.00%
Bootstrap support for Q757V5 as seed ortholog is 100%.
Bootstrap support for B8BQI2 as seed ortholog is 100%.

Group of orthologs #723. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.pseudonana:185

Q75EF1              	100.00%		B8BR92              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for B8BR92 as seed ortholog is 100%.

Group of orthologs #724. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:58

Q75BV1              	100.00%		B8BVT3              	100.00%
Bootstrap support for Q75BV1 as seed ortholog is 99%.
Bootstrap support for B8BVT3 as seed ortholog is 98%.

Group of orthologs #725. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.pseudonana:185

Q75DW4              	100.00%		B8C1P3              	100.00%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for B8C1P3 as seed ortholog is 100%.

Group of orthologs #726. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.pseudonana:185

Q75E31              	100.00%		B8LCD8              	100.00%
Bootstrap support for Q75E31 as seed ortholog is 100%.
Bootstrap support for B8LCD8 as seed ortholog is 100%.

Group of orthologs #727. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 T.pseudonana:184

Q75DA5              	100.00%		B8BQI6              	100.00%
Bootstrap support for Q75DA5 as seed ortholog is 100%.
Bootstrap support for B8BQI6 as seed ortholog is 100%.

Group of orthologs #728. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 T.pseudonana:184

Q757B5              	100.00%		B8C1A0              	100.00%
Bootstrap support for Q757B5 as seed ortholog is 100%.
Bootstrap support for B8C1A0 as seed ortholog is 100%.

Group of orthologs #729. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:184

Q750E8              	100.00%		B8LEB3              	100.00%
Bootstrap support for Q750E8 as seed ortholog is 99%.
Bootstrap support for B8LEB3 as seed ortholog is 100%.

Group of orthologs #730. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.pseudonana:183

Q74ZC7              	100.00%		B8BS05              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for B8BS05 as seed ortholog is 100%.

Group of orthologs #731. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.pseudonana:183

Q74ZP6              	100.00%		B8C1V8              	100.00%
Bootstrap support for Q74ZP6 as seed ortholog is 100%.
Bootstrap support for B8C1V8 as seed ortholog is 100%.

Group of orthologs #732. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.pseudonana:183

Q757V8              	100.00%		B8BZE8              	100.00%
Bootstrap support for Q757V8 as seed ortholog is 100%.
Bootstrap support for B8BZE8 as seed ortholog is 100%.

Group of orthologs #733. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.pseudonana:47

Q75AP9              	100.00%		B8C6P6              	100.00%
Bootstrap support for Q75AP9 as seed ortholog is 100%.
Bootstrap support for B8C6P6 as seed ortholog is 95%.

Group of orthologs #734. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 T.pseudonana:69

Q75EW1              	100.00%		B8BQY5              	100.00%
Bootstrap support for Q75EW1 as seed ortholog is 100%.
Bootstrap support for B8BQY5 as seed ortholog is 94%.

Group of orthologs #735. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 T.pseudonana:182

Q750P3              	100.00%		B8CDN5              	100.00%
Bootstrap support for Q750P3 as seed ortholog is 100%.
Bootstrap support for B8CDN5 as seed ortholog is 100%.

Group of orthologs #736. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.pseudonana:55

Q751M1              	100.00%		B8BSP9              	100.00%
Bootstrap support for Q751M1 as seed ortholog is 100%.
Bootstrap support for B8BSP9 as seed ortholog is 97%.

Group of orthologs #737. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.pseudonana:181

Q753N8              	100.00%		B8BV63              	100.00%
Bootstrap support for Q753N8 as seed ortholog is 100%.
Bootstrap support for B8BV63 as seed ortholog is 100%.

Group of orthologs #738. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.pseudonana:181

Q75BB7              	100.00%		B8BS72              	100.00%
Bootstrap support for Q75BB7 as seed ortholog is 100%.
Bootstrap support for B8BS72 as seed ortholog is 100%.

Group of orthologs #739. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.pseudonana:93

Q754G6              	100.00%		B8C133              	100.00%
Bootstrap support for Q754G6 as seed ortholog is 100%.
Bootstrap support for B8C133 as seed ortholog is 98%.

Group of orthologs #740. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.pseudonana:21

Q75EE9              	100.00%		B8CG44              	100.00%
Bootstrap support for Q75EE9 as seed ortholog is 100%.
Bootstrap support for B8CG44 as seed ortholog is 68%.
Alternative seed ortholog is B8BZI3 (21 bits away from this cluster)

Group of orthologs #741. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.pseudonana:32

Q757W1              	100.00%		B8BPX6              	100.00%
Q756M0              	16.21%		
Q75EZ1              	11.31%		
Bootstrap support for Q757W1 as seed ortholog is 100%.
Bootstrap support for B8BPX6 as seed ortholog is 79%.

Group of orthologs #742. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.pseudonana:180

Q757F2              	100.00%		B8BX37              	100.00%
Q75ET8              	61.35%		
Bootstrap support for Q757F2 as seed ortholog is 100%.
Bootstrap support for B8BX37 as seed ortholog is 100%.

Group of orthologs #743. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.pseudonana:180

Q755C1              	100.00%		B5YN36              	100.00%
Bootstrap support for Q755C1 as seed ortholog is 100%.
Bootstrap support for B5YN36 as seed ortholog is 100%.

Group of orthologs #744. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.pseudonana:180

Q75CP8              	100.00%		B5YMT1              	100.00%
Bootstrap support for Q75CP8 as seed ortholog is 100%.
Bootstrap support for B5YMT1 as seed ortholog is 100%.

Group of orthologs #745. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.pseudonana:180

Q758V1              	100.00%		B8C9U5              	100.00%
Bootstrap support for Q758V1 as seed ortholog is 100%.
Bootstrap support for B8C9U5 as seed ortholog is 100%.

Group of orthologs #746. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 T.pseudonana:86

Q752M9              	100.00%		B8C0S6              	100.00%
                    	       		B8BWU1              	25.97%
Bootstrap support for Q752M9 as seed ortholog is 100%.
Bootstrap support for B8C0S6 as seed ortholog is 98%.

Group of orthologs #747. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.pseudonana:101

Q75DW3              	100.00%		B8BXD9              	100.00%
                    	       		B8BWW1              	42.92%
Bootstrap support for Q75DW3 as seed ortholog is 99%.
Bootstrap support for B8BXD9 as seed ortholog is 99%.

Group of orthologs #748. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 T.pseudonana:179

Q74ZB1              	100.00%		B8BW16              	100.00%
Bootstrap support for Q74ZB1 as seed ortholog is 100%.
Bootstrap support for B8BW16 as seed ortholog is 100%.

Group of orthologs #749. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.pseudonana:19

Q75BN2              	100.00%		B8BRV3              	100.00%
Bootstrap support for Q75BN2 as seed ortholog is 85%.
Bootstrap support for B8BRV3 as seed ortholog is 66%.
Alternative seed ortholog is B8CEB4 (19 bits away from this cluster)

Group of orthologs #750. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:178

Q74ZL4              	100.00%		B5YMW7              	100.00%
Q757L4              	100.00%		B8BX19              	100.00%
                    	       		B8C3R9              	100.00%
Bootstrap support for Q74ZL4 as seed ortholog is 100%.
Bootstrap support for Q757L4 as seed ortholog is 100%.
Bootstrap support for B5YMW7 as seed ortholog is 100%.
Bootstrap support for B8BX19 as seed ortholog is 100%.
Bootstrap support for B8C3R9 as seed ortholog is 100%.

Group of orthologs #751. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:178

Q757T3              	100.00%		B8LCA7              	100.00%
Q751T7              	6.63%		
Bootstrap support for Q757T3 as seed ortholog is 100%.
Bootstrap support for B8LCA7 as seed ortholog is 100%.

Group of orthologs #752. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:178

Q759F6              	100.00%		B5YNV5              	100.00%
Bootstrap support for Q759F6 as seed ortholog is 100%.
Bootstrap support for B5YNV5 as seed ortholog is 100%.

Group of orthologs #753. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:178

Q74ZF9              	100.00%		B8C5F6              	100.00%
Bootstrap support for Q74ZF9 as seed ortholog is 100%.
Bootstrap support for B8C5F6 as seed ortholog is 100%.

Group of orthologs #754. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.pseudonana:178

Q751Y9              	100.00%		B8CAA0              	100.00%
Bootstrap support for Q751Y9 as seed ortholog is 100%.
Bootstrap support for B8CAA0 as seed ortholog is 100%.

Group of orthologs #755. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 T.pseudonana:115

Q75C26              	100.00%		B8CDW5              	100.00%
                    	       		B8CDW9              	98.33%
Bootstrap support for Q75C26 as seed ortholog is 100%.
Bootstrap support for B8CDW5 as seed ortholog is 99%.

Group of orthologs #756. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 T.pseudonana:177

Q75CA5              	100.00%		B8BV37              	100.00%
Bootstrap support for Q75CA5 as seed ortholog is 100%.
Bootstrap support for B8BV37 as seed ortholog is 100%.

Group of orthologs #757. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:43

Q75CA9              	100.00%		B8C6H4              	100.00%
Bootstrap support for Q75CA9 as seed ortholog is 99%.
Bootstrap support for B8C6H4 as seed ortholog is 94%.

Group of orthologs #758. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:4

Q75AM2              	100.00%		B8BWJ4              	100.00%
                    	       		B8C8N2              	14.15%
                    	       		B8BZN1              	8.29%
Bootstrap support for Q75AM2 as seed ortholog is 100%.
Bootstrap support for B8BWJ4 as seed ortholog is 56%.
Alternative seed ortholog is B8BYF9 (4 bits away from this cluster)

Group of orthologs #759. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:9 T.pseudonana:30

Q75E75              	100.00%		B8C368              	100.00%
                    	       		B8LEC0              	8.37%
Bootstrap support for Q75E75 as seed ortholog is 61%.
Alternative seed ortholog is Q755W7 (9 bits away from this cluster)
Bootstrap support for B8C368 as seed ortholog is 78%.

Group of orthologs #760. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:176

Q75B45              	100.00%		B8BSS3              	100.00%
Bootstrap support for Q75B45 as seed ortholog is 100%.
Bootstrap support for B8BSS3 as seed ortholog is 100%.

Group of orthologs #761. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:176

Q753I2              	100.00%		B8BZG7              	100.00%
Bootstrap support for Q753I2 as seed ortholog is 100%.
Bootstrap support for B8BZG7 as seed ortholog is 100%.

Group of orthologs #762. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:102

Q754M0              	100.00%		B8BYV0              	100.00%
Bootstrap support for Q754M0 as seed ortholog is 100%.
Bootstrap support for B8BYV0 as seed ortholog is 99%.

Group of orthologs #763. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:176

Q752Z1              	100.00%		B8C958              	100.00%
Bootstrap support for Q752Z1 as seed ortholog is 100%.
Bootstrap support for B8C958 as seed ortholog is 100%.

Group of orthologs #764. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:176

Q75CW4              	100.00%		B8C486              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for B8C486 as seed ortholog is 100%.

Group of orthologs #765. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.pseudonana:176

Q75CC4              	100.00%		B8CA80              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for B8CA80 as seed ortholog is 100%.

Group of orthologs #766. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.pseudonana:51

Q75BY6              	100.00%		B8LEL5              	100.00%
Bootstrap support for Q75BY6 as seed ortholog is 93%.
Bootstrap support for B8LEL5 as seed ortholog is 85%.

Group of orthologs #767. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:48

Q75D36              	100.00%		B8BQE9              	100.00%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for B8BQE9 as seed ortholog is 90%.

Group of orthologs #768. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:174

Q75C07              	100.00%		B8C7U0              	100.00%
Bootstrap support for Q75C07 as seed ortholog is 100%.
Bootstrap support for B8C7U0 as seed ortholog is 100%.

Group of orthologs #769. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:174

Q75C82              	100.00%		B8CDX6              	100.00%
Bootstrap support for Q75C82 as seed ortholog is 100%.
Bootstrap support for B8CDX6 as seed ortholog is 100%.

Group of orthologs #770. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.pseudonana:174

Q75DV1              	100.00%		B8CCE3              	100.00%
Bootstrap support for Q75DV1 as seed ortholog is 100%.
Bootstrap support for B8CCE3 as seed ortholog is 100%.

Group of orthologs #771. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:52

Q751D1              	100.00%		B8BZV2              	100.00%
Bootstrap support for Q751D1 as seed ortholog is 83%.
Bootstrap support for B8BZV2 as seed ortholog is 85%.

Group of orthologs #772. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:76

Q75DL6              	100.00%		B8BRQ2              	100.00%
Bootstrap support for Q75DL6 as seed ortholog is 99%.
Bootstrap support for B8BRQ2 as seed ortholog is 99%.

Group of orthologs #773. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 T.pseudonana:173

Q759Y5              	100.00%		B8BVB6              	100.00%
Bootstrap support for Q759Y5 as seed ortholog is 100%.
Bootstrap support for B8BVB6 as seed ortholog is 100%.

Group of orthologs #774. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 T.pseudonana:173

Q754Y8              	100.00%		B8LD23              	100.00%
Bootstrap support for Q754Y8 as seed ortholog is 100%.
Bootstrap support for B8LD23 as seed ortholog is 100%.

Group of orthologs #775. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:70

Q752A4              	100.00%		B8LEP6              	100.00%
                    	       		B5YM10              	23.96%
                    	       		B8C6V2              	17.77%
                    	       		B8BR76              	17.31%
Bootstrap support for Q752A4 as seed ortholog is 100%.
Bootstrap support for B8LEP6 as seed ortholog is 97%.

Group of orthologs #776. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:172

Q75CW3              	100.00%		B8C6N8              	100.00%
Q74Z38              	5.72%		
Bootstrap support for Q75CW3 as seed ortholog is 100%.
Bootstrap support for B8C6N8 as seed ortholog is 100%.

Group of orthologs #777. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:172

Q755X2              	100.00%		B8BTK4              	100.00%
Bootstrap support for Q755X2 as seed ortholog is 100%.
Bootstrap support for B8BTK4 as seed ortholog is 100%.

Group of orthologs #778. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:172

Q759D1              	100.00%		B8C0H2              	100.00%
Bootstrap support for Q759D1 as seed ortholog is 100%.
Bootstrap support for B8C0H2 as seed ortholog is 100%.

Group of orthologs #779. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:172

Q756V2              	100.00%		B8CBR7              	100.00%
Bootstrap support for Q756V2 as seed ortholog is 100%.
Bootstrap support for B8CBR7 as seed ortholog is 100%.

Group of orthologs #780. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.pseudonana:172

Q75DH0              	100.00%		B8CCN9              	100.00%
Bootstrap support for Q75DH0 as seed ortholog is 100%.
Bootstrap support for B8CCN9 as seed ortholog is 100%.

Group of orthologs #781. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 T.pseudonana:171

Q8J1F8              	100.00%		B8BX20              	100.00%
Q74ZL5              	72.22%		B5YMW8              	98.36%
Bootstrap support for Q8J1F8 as seed ortholog is 100%.
Bootstrap support for B8BX20 as seed ortholog is 100%.

Group of orthologs #782. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 T.pseudonana:171

Q75AS7              	100.00%		B5YMU6              	100.00%
Bootstrap support for Q75AS7 as seed ortholog is 100%.
Bootstrap support for B5YMU6 as seed ortholog is 100%.

Group of orthologs #783. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:94

Q75C46              	100.00%		B8BS55              	100.00%
Bootstrap support for Q75C46 as seed ortholog is 99%.
Bootstrap support for B8BS55 as seed ortholog is 99%.

Group of orthologs #784. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.pseudonana:169

Q75EG5              	100.00%		B8C3G8              	100.00%
                    	       		B8C3B3              	32.36%
                    	       		B8C3D9              	19.17%
                    	       		B8BSX8              	15.51%
                    	       		B8BSV2              	8.06%
                    	       		B8C3D8              	6.11%
Bootstrap support for Q75EG5 as seed ortholog is 100%.
Bootstrap support for B8C3G8 as seed ortholog is 100%.

Group of orthologs #785. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.pseudonana:169

Q75CJ5              	100.00%		B8BUN1              	100.00%
Bootstrap support for Q75CJ5 as seed ortholog is 100%.
Bootstrap support for B8BUN1 as seed ortholog is 100%.

Group of orthologs #786. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.pseudonana:169

Q756U0              	100.00%		B8C100              	100.00%
Bootstrap support for Q756U0 as seed ortholog is 100%.
Bootstrap support for B8C100 as seed ortholog is 100%.

Group of orthologs #787. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:24

Q759W2              	100.00%		B8C2J5              	100.00%
Bootstrap support for Q759W2 as seed ortholog is 99%.
Bootstrap support for B8C2J5 as seed ortholog is 77%.

Group of orthologs #788. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.pseudonana:169

Q75EN6              	100.00%		B8C2B4              	100.00%
Bootstrap support for Q75EN6 as seed ortholog is 100%.
Bootstrap support for B8C2B4 as seed ortholog is 100%.

Group of orthologs #789. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.pseudonana:168

Q759M6              	100.00%		B5YLV3              	100.00%
Bootstrap support for Q759M6 as seed ortholog is 100%.
Bootstrap support for B5YLV3 as seed ortholog is 100%.

Group of orthologs #790. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.pseudonana:168

Q75C92              	100.00%		B5YNJ7              	100.00%
Bootstrap support for Q75C92 as seed ortholog is 100%.
Bootstrap support for B5YNJ7 as seed ortholog is 100%.

Group of orthologs #791. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.pseudonana:168

Q75D37              	100.00%		B8BWG2              	100.00%
Bootstrap support for Q75D37 as seed ortholog is 100%.
Bootstrap support for B8BWG2 as seed ortholog is 100%.

Group of orthologs #792. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:38 T.pseudonana:167

Q755S7              	100.00%		B8C5C6              	100.00%
                    	       		B8C374              	6.26%
Bootstrap support for Q755S7 as seed ortholog is 84%.
Bootstrap support for B8C5C6 as seed ortholog is 100%.

Group of orthologs #793. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 T.pseudonana:167

Q758L5              	100.00%		B5YNM6              	100.00%
Bootstrap support for Q758L5 as seed ortholog is 100%.
Bootstrap support for B5YNM6 as seed ortholog is 100%.

Group of orthologs #794. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.pseudonana:88

Q75AC6              	100.00%		B8BS39              	100.00%
Bootstrap support for Q75AC6 as seed ortholog is 99%.
Bootstrap support for B8BS39 as seed ortholog is 99%.

Group of orthologs #795. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 T.pseudonana:167

Q759R1              	100.00%		B8BWK7              	100.00%
Bootstrap support for Q759R1 as seed ortholog is 100%.
Bootstrap support for B8BWK7 as seed ortholog is 100%.

Group of orthologs #796. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 T.pseudonana:167

Q75C56              	100.00%		B8C2B6              	100.00%
Bootstrap support for Q75C56 as seed ortholog is 100%.
Bootstrap support for B8C2B6 as seed ortholog is 100%.

Group of orthologs #797. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.pseudonana:167

Q75F47              	100.00%		B8CEA0              	100.00%
Bootstrap support for Q75F47 as seed ortholog is 93%.
Bootstrap support for B8CEA0 as seed ortholog is 100%.

Group of orthologs #798. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.pseudonana:166

Q754N5              	100.00%		B8BUW2              	100.00%
Q75EJ7              	21.38%		B8BTZ7              	39.87%
                    	       		B8C816              	38.83%
                    	       		B8C815              	38.44%
                    	       		B8C0P7              	36.88%
                    	       		B8C0Q0              	31.30%
Bootstrap support for Q754N5 as seed ortholog is 100%.
Bootstrap support for B8BUW2 as seed ortholog is 100%.

Group of orthologs #799. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.pseudonana:65

Q75E33              	100.00%		B8C746              	100.00%
                    	       		B8CDR7              	26.22%
Bootstrap support for Q75E33 as seed ortholog is 100%.
Bootstrap support for B8C746 as seed ortholog is 97%.

Group of orthologs #800. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.pseudonana:95

Q751M0              	100.00%		B8C2C4              	100.00%
Bootstrap support for Q751M0 as seed ortholog is 100%.
Bootstrap support for B8C2C4 as seed ortholog is 99%.

Group of orthologs #801. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.pseudonana:166

Q758U5              	100.00%		B8BXM5              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for B8BXM5 as seed ortholog is 100%.

Group of orthologs #802. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.pseudonana:18

Q758Y8              	100.00%		B8C292              	100.00%
Bootstrap support for Q758Y8 as seed ortholog is 100%.
Bootstrap support for B8C292 as seed ortholog is 64%.
Alternative seed ortholog is B8CEA4 (18 bits away from this cluster)

Group of orthologs #803. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.pseudonana:86

Q756E4              	100.00%		B8C7B6              	100.00%
Bootstrap support for Q756E4 as seed ortholog is 100%.
Bootstrap support for B8C7B6 as seed ortholog is 98%.

Group of orthologs #804. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.pseudonana:20

Q752M5              	100.00%		B5YP01              	100.00%
                    	       		B8C6S0              	45.90%
Bootstrap support for Q752M5 as seed ortholog is 100%.
Bootstrap support for B5YP01 as seed ortholog is 69%.
Alternative seed ortholog is B8BRC2 (20 bits away from this cluster)

Group of orthologs #805. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.pseudonana:165

Q752B3              	100.00%		B8BWC2              	100.00%
Bootstrap support for Q752B3 as seed ortholog is 100%.
Bootstrap support for B8BWC2 as seed ortholog is 100%.

Group of orthologs #806. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.pseudonana:165

Q755W8              	100.00%		B8BW00              	100.00%
Bootstrap support for Q755W8 as seed ortholog is 100%.
Bootstrap support for B8BW00 as seed ortholog is 100%.

Group of orthologs #807. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:20 T.pseudonana:63

Q75DG7              	100.00%		B8BW01              	100.00%
Bootstrap support for Q75DG7 as seed ortholog is 78%.
Bootstrap support for B8BW01 as seed ortholog is 99%.

Group of orthologs #808. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.pseudonana:165

Q74ZG3              	100.00%		B8CEZ7              	100.00%
Bootstrap support for Q74ZG3 as seed ortholog is 100%.
Bootstrap support for B8CEZ7 as seed ortholog is 100%.

Group of orthologs #809. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 T.pseudonana:164

Q756I6              	100.00%		B5YN42              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for B5YN42 as seed ortholog is 100%.

Group of orthologs #810. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:36 T.pseudonana:3

Q753G9              	100.00%		B8CE97              	100.00%
                    	       		B8CED9              	85.06%
Bootstrap support for Q753G9 as seed ortholog is 79%.
Bootstrap support for B8CE97 as seed ortholog is 52%.
Alternative seed ortholog is B8BXQ5 (3 bits away from this cluster)

Group of orthologs #811. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.pseudonana:163

Q75B92              	100.00%		B8BS25              	100.00%
Bootstrap support for Q75B92 as seed ortholog is 100%.
Bootstrap support for B8BS25 as seed ortholog is 100%.

Group of orthologs #812. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.pseudonana:163

Q75A12              	100.00%		B8C0L4              	100.00%
Bootstrap support for Q75A12 as seed ortholog is 100%.
Bootstrap support for B8C0L4 as seed ortholog is 100%.

Group of orthologs #813. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.pseudonana:163

Q75CR9              	100.00%		B8BYJ8              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for B8BYJ8 as seed ortholog is 100%.

Group of orthologs #814. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.pseudonana:162

Q75B51              	100.00%		B8BQW1              	100.00%
Bootstrap support for Q75B51 as seed ortholog is 100%.
Bootstrap support for B8BQW1 as seed ortholog is 100%.

Group of orthologs #815. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.pseudonana:162

Q757P1              	100.00%		B8BX32              	100.00%
Bootstrap support for Q757P1 as seed ortholog is 100%.
Bootstrap support for B8BX32 as seed ortholog is 100%.

Group of orthologs #816. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.pseudonana:162

Q75ET0              	100.00%		B8C7S6              	100.00%
Bootstrap support for Q75ET0 as seed ortholog is 100%.
Bootstrap support for B8C7S6 as seed ortholog is 100%.

Group of orthologs #817. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.pseudonana:161

Q757Z7              	100.00%		B8BY08              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for B8BY08 as seed ortholog is 100%.

Group of orthologs #818. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.pseudonana:61

Q755F6              	100.00%		B8C4A6              	100.00%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for B8C4A6 as seed ortholog is 96%.

Group of orthologs #819. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.pseudonana:161

Q75DY0              	100.00%		B8CA57              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for B8CA57 as seed ortholog is 100%.

Group of orthologs #820. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:160

Q756E0              	100.00%		B5YLI5              	100.00%
                    	       		B8C427              	26.98%
Bootstrap support for Q756E0 as seed ortholog is 100%.
Bootstrap support for B5YLI5 as seed ortholog is 100%.

Group of orthologs #821. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:49

Q752Z9              	100.00%		B8BQ53              	100.00%
                    	       		B8BQC8              	25.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for B8BQ53 as seed ortholog is 95%.

Group of orthologs #822. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:74

Q754D9              	100.00%		B8BWD5              	100.00%
                    	       		B8BWA7              	13.64%
Bootstrap support for Q754D9 as seed ortholog is 97%.
Bootstrap support for B8BWD5 as seed ortholog is 93%.

Group of orthologs #823. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:160

Q756Y7              	100.00%		B5YNS8              	100.00%
Bootstrap support for Q756Y7 as seed ortholog is 100%.
Bootstrap support for B5YNS8 as seed ortholog is 100%.

Group of orthologs #824. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:160

Q75CC6              	100.00%		B8BS24              	100.00%
Bootstrap support for Q75CC6 as seed ortholog is 100%.
Bootstrap support for B8BS24 as seed ortholog is 100%.

Group of orthologs #825. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:160

Q759Q8              	100.00%		B8BXM4              	100.00%
Bootstrap support for Q759Q8 as seed ortholog is 100%.
Bootstrap support for B8BXM4 as seed ortholog is 100%.

Group of orthologs #826. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.pseudonana:160

Q754N8              	100.00%		B8C2E8              	100.00%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for B8C2E8 as seed ortholog is 100%.

Group of orthologs #827. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.pseudonana:159

Q756I1              	100.00%		B8BTC2              	100.00%
Bootstrap support for Q756I1 as seed ortholog is 83%.
Bootstrap support for B8BTC2 as seed ortholog is 100%.

Group of orthologs #828. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.pseudonana:56

Q75E78              	100.00%		B8BZ19              	100.00%
Bootstrap support for Q75E78 as seed ortholog is 100%.
Bootstrap support for B8BZ19 as seed ortholog is 91%.

Group of orthologs #829. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.pseudonana:67

Q75CU5              	100.00%		B8C1R6              	100.00%
Bootstrap support for Q75CU5 as seed ortholog is 100%.
Bootstrap support for B8C1R6 as seed ortholog is 96%.

Group of orthologs #830. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.pseudonana:1

Q757U9              	100.00%		B8LDI7              	100.00%
Bootstrap support for Q757U9 as seed ortholog is 100%.
Bootstrap support for B8LDI7 as seed ortholog is 52%.
Alternative seed ortholog is B8CCP6 (1 bits away from this cluster)

Group of orthologs #831. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.pseudonana:101

Q75A80              	100.00%		B8LC64              	100.00%
Bootstrap support for Q75A80 as seed ortholog is 100%.
Bootstrap support for B8LC64 as seed ortholog is 99%.

Group of orthologs #832. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.pseudonana:159

Q75C85              	100.00%		B8LEK4              	100.00%
Bootstrap support for Q75C85 as seed ortholog is 100%.
Bootstrap support for B8LEK4 as seed ortholog is 100%.

Group of orthologs #833. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.pseudonana:158

Q759B6              	100.00%		B8BRK1              	100.00%
Bootstrap support for Q759B6 as seed ortholog is 100%.
Bootstrap support for B8BRK1 as seed ortholog is 100%.

Group of orthologs #834. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.pseudonana:158

Q756N3              	100.00%		B8BXB6              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for B8BXB6 as seed ortholog is 100%.

Group of orthologs #835. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.pseudonana:158

Q759L9              	100.00%		B8C0K6              	100.00%
Bootstrap support for Q759L9 as seed ortholog is 100%.
Bootstrap support for B8C0K6 as seed ortholog is 100%.

Group of orthologs #836. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.pseudonana:158

Q754B8              	100.00%		B8C780              	100.00%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for B8C780 as seed ortholog is 100%.

Group of orthologs #837. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.pseudonana:158

Q75C73              	100.00%		B8C7T7              	100.00%
Bootstrap support for Q75C73 as seed ortholog is 100%.
Bootstrap support for B8C7T7 as seed ortholog is 100%.

Group of orthologs #838. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:56

Q759E2              	100.00%		B8BRI8              	100.00%
Bootstrap support for Q759E2 as seed ortholog is 91%.
Bootstrap support for B8BRI8 as seed ortholog is 67%.
Alternative seed ortholog is B8C1G4 (56 bits away from this cluster)

Group of orthologs #839. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.pseudonana:157

Q758X6              	100.00%		B8C4I0              	100.00%
Bootstrap support for Q758X6 as seed ortholog is 100%.
Bootstrap support for B8C4I0 as seed ortholog is 100%.

Group of orthologs #840. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.pseudonana:60

Q758L8              	100.00%		B8LBV7              	100.00%
Bootstrap support for Q758L8 as seed ortholog is 100%.
Bootstrap support for B8LBV7 as seed ortholog is 96%.

Group of orthologs #841. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.pseudonana:156

Q74ZC8              	100.00%		B8BS68              	100.00%
Bootstrap support for Q74ZC8 as seed ortholog is 100%.
Bootstrap support for B8BS68 as seed ortholog is 100%.

Group of orthologs #842. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.pseudonana:13

Q75EA9              	100.00%		B8BUH0              	100.00%
Bootstrap support for Q75EA9 as seed ortholog is 100%.
Bootstrap support for B8BUH0 as seed ortholog is 41%.
Alternative seed ortholog is B8C078 (13 bits away from this cluster)

Group of orthologs #843. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:102

Q74ZW2              	100.00%		B8C9S3              	100.00%
Bootstrap support for Q74ZW2 as seed ortholog is 99%.
Bootstrap support for B8C9S3 as seed ortholog is 99%.

Group of orthologs #844. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.pseudonana:155

Q756D6              	100.00%		B8BW67              	100.00%
Bootstrap support for Q756D6 as seed ortholog is 100%.
Bootstrap support for B8BW67 as seed ortholog is 100%.

Group of orthologs #845. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.pseudonana:155

Q74ZF7              	100.00%		B8C1A5              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for B8C1A5 as seed ortholog is 100%.

Group of orthologs #846. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.pseudonana:48

Q753B5              	100.00%		B8BYZ2              	100.00%
Bootstrap support for Q753B5 as seed ortholog is 100%.
Bootstrap support for B8BYZ2 as seed ortholog is 92%.

Group of orthologs #847. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.pseudonana:155

Q755C8              	100.00%		B8BZK0              	100.00%
Bootstrap support for Q755C8 as seed ortholog is 100%.
Bootstrap support for B8BZK0 as seed ortholog is 100%.

Group of orthologs #848. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.pseudonana:155

Q75B71              	100.00%		B8BYS5              	100.00%
Bootstrap support for Q75B71 as seed ortholog is 100%.
Bootstrap support for B8BYS5 as seed ortholog is 100%.

Group of orthologs #849. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.pseudonana:155

Q75F96              	100.00%		B8BZ37              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for B8BZ37 as seed ortholog is 100%.

Group of orthologs #850. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.pseudonana:103

Q75AL4              	100.00%		B8BZU1              	100.00%
Q752Y4              	9.11%		
Bootstrap support for Q75AL4 as seed ortholog is 100%.
Bootstrap support for B8BZU1 as seed ortholog is 99%.

Group of orthologs #851. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.pseudonana:154

Q75AA8              	100.00%		B8BWT4              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for B8BWT4 as seed ortholog is 100%.

Group of orthologs #852. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.pseudonana:154

Q750F9              	100.00%		B8C5J4              	100.00%
Bootstrap support for Q750F9 as seed ortholog is 100%.
Bootstrap support for B8C5J4 as seed ortholog is 100%.

Group of orthologs #853. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.pseudonana:154

Q75BG5              	100.00%		B8BYJ2              	100.00%
Bootstrap support for Q75BG5 as seed ortholog is 100%.
Bootstrap support for B8BYJ2 as seed ortholog is 100%.

Group of orthologs #854. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.pseudonana:153

Q74Z42              	100.00%		B8C0R2              	100.00%
Bootstrap support for Q74Z42 as seed ortholog is 100%.
Bootstrap support for B8C0R2 as seed ortholog is 100%.

Group of orthologs #855. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.pseudonana:153

Q756B3              	100.00%		B8BYG3              	100.00%
Bootstrap support for Q756B3 as seed ortholog is 100%.
Bootstrap support for B8BYG3 as seed ortholog is 100%.

Group of orthologs #856. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.pseudonana:153

Q757H7              	100.00%		B8C1Q1              	100.00%
Bootstrap support for Q757H7 as seed ortholog is 100%.
Bootstrap support for B8C1Q1 as seed ortholog is 100%.

Group of orthologs #857. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.pseudonana:153

Q751N4              	100.00%		B8C7G8              	100.00%
Bootstrap support for Q751N4 as seed ortholog is 100%.
Bootstrap support for B8C7G8 as seed ortholog is 100%.

Group of orthologs #858. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:12 T.pseudonana:152

Q756H9              	100.00%		B8C1D9              	100.00%
Q757I3              	16.10%		B8C4F1              	19.46%
Bootstrap support for Q756H9 as seed ortholog is 62%.
Alternative seed ortholog is Q750Q6 (12 bits away from this cluster)
Bootstrap support for B8C1D9 as seed ortholog is 100%.

Group of orthologs #859. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:47

Q75F38              	100.00%		B5YN41              	100.00%
                    	       		B8BZ05              	9.32%
Bootstrap support for Q75F38 as seed ortholog is 99%.
Bootstrap support for B5YN41 as seed ortholog is 99%.

Group of orthologs #860. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:55

Q75CF2              	100.00%		B8LCI4              	100.00%
                    	       		B8C3X1              	59.43%
Bootstrap support for Q75CF2 as seed ortholog is 100%.
Bootstrap support for B8LCI4 as seed ortholog is 91%.

Group of orthologs #861. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:88

Q750D1              	100.00%		B8BYT6              	100.00%
Bootstrap support for Q750D1 as seed ortholog is 100%.
Bootstrap support for B8BYT6 as seed ortholog is 98%.

Group of orthologs #862. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:152

Q75EE2              	100.00%		B5YNT4              	100.00%
Bootstrap support for Q75EE2 as seed ortholog is 100%.
Bootstrap support for B5YNT4 as seed ortholog is 100%.

Group of orthologs #863. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:152

Q755V0              	100.00%		B8BXB0              	100.00%
Bootstrap support for Q755V0 as seed ortholog is 100%.
Bootstrap support for B8BXB0 as seed ortholog is 100%.

Group of orthologs #864. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:152

Q757L7              	100.00%		B8BX48              	100.00%
Bootstrap support for Q757L7 as seed ortholog is 100%.
Bootstrap support for B8BX48 as seed ortholog is 100%.

Group of orthologs #865. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.pseudonana:106

Q756A4              	100.00%		B8C1R2              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for B8C1R2 as seed ortholog is 99%.

Group of orthologs #866. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.pseudonana:151

Q75B73              	100.00%		B8BUT1              	100.00%
Bootstrap support for Q75B73 as seed ortholog is 100%.
Bootstrap support for B8BUT1 as seed ortholog is 100%.

Group of orthologs #867. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.pseudonana:151

Q756D1              	100.00%		B8C674              	100.00%
Bootstrap support for Q756D1 as seed ortholog is 100%.
Bootstrap support for B8C674 as seed ortholog is 100%.

Group of orthologs #868. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.pseudonana:151

Q755G8              	100.00%		B8C8V9              	100.00%
Bootstrap support for Q755G8 as seed ortholog is 100%.
Bootstrap support for B8C8V9 as seed ortholog is 100%.

Group of orthologs #869. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.pseudonana:151

Q75F43              	100.00%		B8C4F6              	100.00%
Bootstrap support for Q75F43 as seed ortholog is 100%.
Bootstrap support for B8C4F6 as seed ortholog is 100%.

Group of orthologs #870. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.pseudonana:151

Q75ES6              	100.00%		B8C8F0              	100.00%
Bootstrap support for Q75ES6 as seed ortholog is 100%.
Bootstrap support for B8C8F0 as seed ortholog is 100%.

Group of orthologs #871. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:39 T.pseudonana:17

Q752Y1              	100.00%		B8BUN8              	100.00%
                    	       		B8CC96              	100.00%
Bootstrap support for Q752Y1 as seed ortholog is 73%.
Alternative seed ortholog is Q755Y2 (39 bits away from this cluster)
Bootstrap support for B8BUN8 as seed ortholog is 59%.
Alternative seed ortholog is B8C8J8 (17 bits away from this cluster)
Bootstrap support for B8CC96 as seed ortholog is 69%.
Alternative seed ortholog is B8C8J8 (17 bits away from this cluster)

Group of orthologs #872. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.pseudonana:71

Q759H8              	100.00%		B8CEN5              	100.00%
                    	       		B8CD48              	29.88%
Bootstrap support for Q759H8 as seed ortholog is 100%.
Bootstrap support for B8CEN5 as seed ortholog is 98%.

Group of orthologs #873. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.pseudonana:150

Q75BJ3              	100.00%		B5YND0              	100.00%
Bootstrap support for Q75BJ3 as seed ortholog is 100%.
Bootstrap support for B5YND0 as seed ortholog is 100%.

Group of orthologs #874. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:68

Q751S7              	100.00%		B8BZN7              	100.00%
Bootstrap support for Q751S7 as seed ortholog is 99%.
Bootstrap support for B8BZN7 as seed ortholog is 86%.

Group of orthologs #875. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.pseudonana:150

Q754Z0              	100.00%		B8C4V8              	100.00%
Bootstrap support for Q754Z0 as seed ortholog is 100%.
Bootstrap support for B8C4V8 as seed ortholog is 100%.

Group of orthologs #876. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.pseudonana:150

Q757L0              	100.00%		B8CAX3              	100.00%
Bootstrap support for Q757L0 as seed ortholog is 100%.
Bootstrap support for B8CAX3 as seed ortholog is 100%.

Group of orthologs #877. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:19

Q754C4              	100.00%		B8BSN4              	100.00%
Bootstrap support for Q754C4 as seed ortholog is 92%.
Bootstrap support for B8BSN4 as seed ortholog is 77%.

Group of orthologs #878. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.pseudonana:149

Q752C6              	100.00%		B8BV91              	100.00%
Bootstrap support for Q752C6 as seed ortholog is 100%.
Bootstrap support for B8BV91 as seed ortholog is 100%.

Group of orthologs #879. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.pseudonana:149

Q75CJ3              	100.00%		B5YP42              	100.00%
Bootstrap support for Q75CJ3 as seed ortholog is 100%.
Bootstrap support for B5YP42 as seed ortholog is 100%.

Group of orthologs #880. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.pseudonana:1

Q75AG1              	100.00%		B8BT50              	100.00%
Bootstrap support for Q75AG1 as seed ortholog is 90%.
Bootstrap support for B8BT50 as seed ortholog is 51%.
Alternative seed ortholog is B8CFV3 (1 bits away from this cluster)

Group of orthologs #881. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.pseudonana:149

Q75DT3              	100.00%		B8BTJ6              	100.00%
Bootstrap support for Q75DT3 as seed ortholog is 100%.
Bootstrap support for B8BTJ6 as seed ortholog is 100%.

Group of orthologs #882. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:67

Q75A60              	100.00%		B8C2C9              	100.00%
Bootstrap support for Q75A60 as seed ortholog is 99%.
Bootstrap support for B8C2C9 as seed ortholog is 97%.

Group of orthologs #883. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.pseudonana:149

Q75DA3              	100.00%		B8C2J2              	100.00%
Bootstrap support for Q75DA3 as seed ortholog is 100%.
Bootstrap support for B8C2J2 as seed ortholog is 100%.

Group of orthologs #884. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.pseudonana:149

Q753R8              	100.00%		B8LBU0              	100.00%
Bootstrap support for Q753R8 as seed ortholog is 100%.
Bootstrap support for B8LBU0 as seed ortholog is 100%.

Group of orthologs #885. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.pseudonana:149

Q75EV4              	100.00%		B8CFW9              	100.00%
Bootstrap support for Q75EV4 as seed ortholog is 100%.
Bootstrap support for B8CFW9 as seed ortholog is 100%.

Group of orthologs #886. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.pseudonana:63

Q750M1              	100.00%		B8BU97              	100.00%
Bootstrap support for Q750M1 as seed ortholog is 69%.
Alternative seed ortholog is Q75CE7 (40 bits away from this cluster)
Bootstrap support for B8BU97 as seed ortholog is 95%.

Group of orthologs #887. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.pseudonana:148

Q754K4              	100.00%		B8C7T4              	100.00%
Bootstrap support for Q754K4 as seed ortholog is 100%.
Bootstrap support for B8C7T4 as seed ortholog is 100%.

Group of orthologs #888. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.pseudonana:148

Q75AT6              	100.00%		B8C438              	100.00%
Bootstrap support for Q75AT6 as seed ortholog is 100%.
Bootstrap support for B8C438 as seed ortholog is 100%.

Group of orthologs #889. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.pseudonana:148

Q759W4              	100.00%		B8CCB4              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for B8CCB4 as seed ortholog is 100%.

Group of orthologs #890. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.pseudonana:148

Q75BM3              	100.00%		B8LEX2              	100.00%
Bootstrap support for Q75BM3 as seed ortholog is 100%.
Bootstrap support for B8LEX2 as seed ortholog is 100%.

Group of orthologs #891. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.pseudonana:147

O74267              	100.00%		B8BYA5              	100.00%
Q74ZK0              	29.25%		
Bootstrap support for O74267 as seed ortholog is 100%.
Bootstrap support for B8BYA5 as seed ortholog is 100%.

Group of orthologs #892. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.pseudonana:147

Q757T8              	100.00%		B8BQL8              	100.00%
Bootstrap support for Q757T8 as seed ortholog is 100%.
Bootstrap support for B8BQL8 as seed ortholog is 100%.

Group of orthologs #893. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.pseudonana:37

Q757M1              	100.00%		B8BZL0              	100.00%
Bootstrap support for Q757M1 as seed ortholog is 96%.
Bootstrap support for B8BZL0 as seed ortholog is 84%.

Group of orthologs #894. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.pseudonana:147

Q74ZT7              	100.00%		B8LBT6              	100.00%
Bootstrap support for Q74ZT7 as seed ortholog is 100%.
Bootstrap support for B8LBT6 as seed ortholog is 100%.

Group of orthologs #895. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.pseudonana:147

Q75ET1              	100.00%		B8C566              	100.00%
Bootstrap support for Q75ET1 as seed ortholog is 100%.
Bootstrap support for B8C566 as seed ortholog is 100%.

Group of orthologs #896. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.pseudonana:146

Q755M2              	100.00%		B5YMI7              	100.00%
                    	       		B8BWB1              	77.12%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for B5YMI7 as seed ortholog is 100%.

Group of orthologs #897. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.pseudonana:146

Q751C8              	100.00%		A0T0Z8              	100.00%
Bootstrap support for Q751C8 as seed ortholog is 100%.
Bootstrap support for A0T0Z8 as seed ortholog is 100%.

Group of orthologs #898. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.pseudonana:97

Q75BN3              	100.00%		B5YNV4              	100.00%
Bootstrap support for Q75BN3 as seed ortholog is 100%.
Bootstrap support for B5YNV4 as seed ortholog is 98%.

Group of orthologs #899. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.pseudonana:146

Q759P8              	100.00%		B8CEK2              	100.00%
Bootstrap support for Q759P8 as seed ortholog is 100%.
Bootstrap support for B8CEK2 as seed ortholog is 100%.

Group of orthologs #900. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 T.pseudonana:145

Q751I1              	100.00%		B8BWW0              	100.00%
Bootstrap support for Q751I1 as seed ortholog is 100%.
Bootstrap support for B8BWW0 as seed ortholog is 100%.

Group of orthologs #901. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:28 T.pseudonana:14

Q750J8              	100.00%		B8BZ33              	100.00%
Bootstrap support for Q750J8 as seed ortholog is 81%.
Bootstrap support for B8BZ33 as seed ortholog is 34%.
Alternative seed ortholog is B8BZB2 (14 bits away from this cluster)

Group of orthologs #902. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 T.pseudonana:103

Q75AY5              	100.00%		B8C089              	100.00%
Bootstrap support for Q75AY5 as seed ortholog is 100%.
Bootstrap support for B8C089 as seed ortholog is 97%.

Group of orthologs #903. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 T.pseudonana:145

Q75BG9              	100.00%		B8C645              	100.00%
Bootstrap support for Q75BG9 as seed ortholog is 100%.
Bootstrap support for B8C645 as seed ortholog is 100%.

Group of orthologs #904. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.pseudonana:144

Q757X1              	100.00%		B5YM38              	100.00%
Bootstrap support for Q757X1 as seed ortholog is 100%.
Bootstrap support for B5YM38 as seed ortholog is 100%.

Group of orthologs #905. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.pseudonana:144

Q753E7              	100.00%		B8BUD4              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for B8BUD4 as seed ortholog is 100%.

Group of orthologs #906. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.pseudonana:17

Q75EN5              	100.00%		B8CCE5              	100.00%
Bootstrap support for Q75EN5 as seed ortholog is 100%.
Bootstrap support for B8CCE5 as seed ortholog is 68%.
Alternative seed ortholog is B8BVJ4 (17 bits away from this cluster)

Group of orthologs #907. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.pseudonana:143

Q75CJ6              	100.00%		B8BUF2              	100.00%
                    	       		B8BUF5              	65.34%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for B8BUF2 as seed ortholog is 100%.

Group of orthologs #908. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.pseudonana:143

Q758W5              	100.00%		B8BUA8              	100.00%
Bootstrap support for Q758W5 as seed ortholog is 100%.
Bootstrap support for B8BUA8 as seed ortholog is 100%.

Group of orthologs #909. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.pseudonana:143

Q754X9              	100.00%		B8C4D1              	100.00%
Bootstrap support for Q754X9 as seed ortholog is 100%.
Bootstrap support for B8C4D1 as seed ortholog is 100%.

Group of orthologs #910. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.pseudonana:143

Q758P1              	100.00%		B8LDE2              	100.00%
Bootstrap support for Q758P1 as seed ortholog is 100%.
Bootstrap support for B8LDE2 as seed ortholog is 100%.

Group of orthologs #911. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.pseudonana:143

Q75DC3              	100.00%		B8CG55              	100.00%
Bootstrap support for Q75DC3 as seed ortholog is 100%.
Bootstrap support for B8CG55 as seed ortholog is 100%.

Group of orthologs #912. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.pseudonana:142

Q74ZG6              	100.00%		B8BU74              	100.00%
Bootstrap support for Q74ZG6 as seed ortholog is 100%.
Bootstrap support for B8BU74 as seed ortholog is 100%.

Group of orthologs #913. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.pseudonana:142

Q753F8              	100.00%		B8BWG4              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for B8BWG4 as seed ortholog is 100%.

Group of orthologs #914. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.pseudonana:142

Q75D95              	100.00%		B8BT39              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for B8BT39 as seed ortholog is 100%.

Group of orthologs #915. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.pseudonana:142

Q75DI0              	100.00%		B8CC23              	100.00%
Bootstrap support for Q75DI0 as seed ortholog is 100%.
Bootstrap support for B8CC23 as seed ortholog is 100%.

Group of orthologs #916. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.pseudonana:141

Q75DV7              	100.00%		B8C2P5              	100.00%
Bootstrap support for Q75DV7 as seed ortholog is 100%.
Bootstrap support for B8C2P5 as seed ortholog is 100%.

Group of orthologs #917. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.pseudonana:141

Q75CG2              	100.00%		B8C5V1              	100.00%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for B8C5V1 as seed ortholog is 100%.

Group of orthologs #918. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.pseudonana:58

Q75BL1              	100.00%		B8CGM3              	100.00%
Bootstrap support for Q75BL1 as seed ortholog is 95%.
Bootstrap support for B8CGM3 as seed ortholog is 94%.

Group of orthologs #919. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.pseudonana:93

Q75EK7              	100.00%		B8LBY8              	100.00%
Bootstrap support for Q75EK7 as seed ortholog is 91%.
Bootstrap support for B8LBY8 as seed ortholog is 99%.

Group of orthologs #920. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:140

Q752F0              	100.00%		B8BQ52              	100.00%
Bootstrap support for Q752F0 as seed ortholog is 100%.
Bootstrap support for B8BQ52 as seed ortholog is 100%.

Group of orthologs #921. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:140

Q74ZA3              	100.00%		B8BZL3              	100.00%
Bootstrap support for Q74ZA3 as seed ortholog is 100%.
Bootstrap support for B8BZL3 as seed ortholog is 100%.

Group of orthologs #922. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:140

Q75C23              	100.00%		B8BWL1              	100.00%
Bootstrap support for Q75C23 as seed ortholog is 100%.
Bootstrap support for B8BWL1 as seed ortholog is 100%.

Group of orthologs #923. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:140

Q754Z5              	100.00%		B8CBS4              	100.00%
Bootstrap support for Q754Z5 as seed ortholog is 100%.
Bootstrap support for B8CBS4 as seed ortholog is 100%.

Group of orthologs #924. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:140

Q75B43              	100.00%		B8C9N2              	100.00%
Bootstrap support for Q75B43 as seed ortholog is 100%.
Bootstrap support for B8C9N2 as seed ortholog is 100%.

Group of orthologs #925. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.pseudonana:140

Q755L1              	100.00%		B8LEI0              	100.00%
Bootstrap support for Q755L1 as seed ortholog is 100%.
Bootstrap support for B8LEI0 as seed ortholog is 100%.

Group of orthologs #926. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q759V2              	100.00%		B8BW19              	100.00%
Q75AW2              	19.91%		
Bootstrap support for Q759V2 as seed ortholog is 100%.
Bootstrap support for B8BW19 as seed ortholog is 100%.

Group of orthologs #927. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q758B7              	100.00%		B8BZ28              	100.00%
Q757G3              	13.04%		
Bootstrap support for Q758B7 as seed ortholog is 100%.
Bootstrap support for B8BZ28 as seed ortholog is 100%.

Group of orthologs #928. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q752M6              	100.00%		B8C653              	100.00%
Q74ZN1              	36.19%		
Bootstrap support for Q752M6 as seed ortholog is 100%.
Bootstrap support for B8C653 as seed ortholog is 100%.

Group of orthologs #929. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:6

Q74Z98              	100.00%		B8C9J1              	100.00%
Q757V3              	13.07%		
Bootstrap support for Q74Z98 as seed ortholog is 100%.
Bootstrap support for B8C9J1 as seed ortholog is 56%.
Alternative seed ortholog is B8BXJ8 (6 bits away from this cluster)

Group of orthologs #930. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q758F3              	100.00%		B8BRP1              	100.00%
Bootstrap support for Q758F3 as seed ortholog is 100%.
Bootstrap support for B8BRP1 as seed ortholog is 100%.

Group of orthologs #931. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q751Y7              	100.00%		B8C231              	100.00%
Bootstrap support for Q751Y7 as seed ortholog is 100%.
Bootstrap support for B8C231 as seed ortholog is 100%.

Group of orthologs #932. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q75CV0              	100.00%		B8C2Y2              	100.00%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for B8C2Y2 as seed ortholog is 100%.

Group of orthologs #933. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q753E0              	100.00%		B8CFR1              	100.00%
Bootstrap support for Q753E0 as seed ortholog is 100%.
Bootstrap support for B8CFR1 as seed ortholog is 100%.

Group of orthologs #934. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.pseudonana:139

Q756E6              	100.00%		B8LCF3              	100.00%
Bootstrap support for Q756E6 as seed ortholog is 100%.
Bootstrap support for B8LCF3 as seed ortholog is 100%.

Group of orthologs #935. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:138

Q74ZA6              	100.00%		B5YMI4              	100.00%
Bootstrap support for Q74ZA6 as seed ortholog is 100%.
Bootstrap support for B5YMI4 as seed ortholog is 100%.

Group of orthologs #936. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:138

Q74ZP3              	100.00%		B8BPX7              	100.00%
Bootstrap support for Q74ZP3 as seed ortholog is 100%.
Bootstrap support for B8BPX7 as seed ortholog is 100%.

Group of orthologs #937. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:94

Q756F9              	100.00%		A0T0Q0              	100.00%
Bootstrap support for Q756F9 as seed ortholog is 100%.
Bootstrap support for A0T0Q0 as seed ortholog is 99%.

Group of orthologs #938. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:138

Q754J9              	100.00%		B8BXP5              	100.00%
Bootstrap support for Q754J9 as seed ortholog is 100%.
Bootstrap support for B8BXP5 as seed ortholog is 100%.

Group of orthologs #939. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:65

Q75AF2              	100.00%		B8BTH6              	100.00%
Bootstrap support for Q75AF2 as seed ortholog is 100%.
Bootstrap support for B8BTH6 as seed ortholog is 99%.

Group of orthologs #940. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.pseudonana:138

Q75EF9              	100.00%		B8C046              	100.00%
Bootstrap support for Q75EF9 as seed ortholog is 100%.
Bootstrap support for B8C046 as seed ortholog is 100%.

Group of orthologs #941. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.pseudonana:137

Q753H0              	100.00%		B5YP90              	100.00%
Bootstrap support for Q753H0 as seed ortholog is 100%.
Bootstrap support for B5YP90 as seed ortholog is 100%.

Group of orthologs #942. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.pseudonana:137

Q755S0              	100.00%		B8BZP4              	100.00%
Bootstrap support for Q755S0 as seed ortholog is 100%.
Bootstrap support for B8BZP4 as seed ortholog is 100%.

Group of orthologs #943. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.pseudonana:137

Q753F4              	100.00%		B8C6T1              	100.00%
Bootstrap support for Q753F4 as seed ortholog is 100%.
Bootstrap support for B8C6T1 as seed ortholog is 100%.

Group of orthologs #944. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.pseudonana:136

Q759T2              	100.00%		B8BS38              	100.00%
Bootstrap support for Q759T2 as seed ortholog is 100%.
Bootstrap support for B8BS38 as seed ortholog is 100%.

Group of orthologs #945. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.pseudonana:136

Q75C01              	100.00%		B8BZM1              	100.00%
Bootstrap support for Q75C01 as seed ortholog is 100%.
Bootstrap support for B8BZM1 as seed ortholog is 100%.

Group of orthologs #946. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.pseudonana:136

Q75E84              	100.00%		B8C3Z3              	100.00%
Bootstrap support for Q75E84 as seed ortholog is 100%.
Bootstrap support for B8C3Z3 as seed ortholog is 100%.

Group of orthologs #947. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.pseudonana:136

Q75C67              	100.00%		B8C6I1              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 100%.
Bootstrap support for B8C6I1 as seed ortholog is 100%.

Group of orthologs #948. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.pseudonana:136

Q753C1              	100.00%		B8LE28              	100.00%
Bootstrap support for Q753C1 as seed ortholog is 100%.
Bootstrap support for B8LE28 as seed ortholog is 100%.

Group of orthologs #949. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.pseudonana:135

Q75CE2              	100.00%		B8C6H8              	100.00%
                    	       		B5YP44              	55.33%
                    	       		B8C2B9              	44.78%
Bootstrap support for Q75CE2 as seed ortholog is 100%.
Bootstrap support for B8C6H8 as seed ortholog is 100%.

Group of orthologs #950. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.pseudonana:135

Q75A38              	100.00%		B8BTJ3              	100.00%
Q75A37              	77.34%		
Bootstrap support for Q75A38 as seed ortholog is 100%.
Bootstrap support for B8BTJ3 as seed ortholog is 100%.

Group of orthologs #951. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.pseudonana:51

Q756A1              	100.00%		B5YLY4              	100.00%
Bootstrap support for Q756A1 as seed ortholog is 83%.
Bootstrap support for B5YLY4 as seed ortholog is 91%.

Group of orthologs #952. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:26

Q755L0              	100.00%		B8BTX7              	100.00%
Bootstrap support for Q755L0 as seed ortholog is 90%.
Bootstrap support for B8BTX7 as seed ortholog is 72%.
Alternative seed ortholog is B8CE79 (26 bits away from this cluster)

Group of orthologs #953. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.pseudonana:68

Q753T9              	100.00%		B8BX86              	100.00%
Bootstrap support for Q753T9 as seed ortholog is 100%.
Bootstrap support for B8BX86 as seed ortholog is 98%.

Group of orthologs #954. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:134

Q75AN3              	100.00%		B8C1B4              	100.00%
                    	       		B8BXP2              	14.66%
Bootstrap support for Q75AN3 as seed ortholog is 100%.
Bootstrap support for B8C1B4 as seed ortholog is 100%.

Group of orthologs #955. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:134

Q753P6              	100.00%		B5YN06              	100.00%
Bootstrap support for Q753P6 as seed ortholog is 100%.
Bootstrap support for B5YN06 as seed ortholog is 100%.

Group of orthologs #956. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:134

Q75DA1              	100.00%		B8BUV0              	100.00%
Bootstrap support for Q75DA1 as seed ortholog is 100%.
Bootstrap support for B8BUV0 as seed ortholog is 100%.

Group of orthologs #957. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:134

Q753X8              	100.00%		B8C5Y3              	100.00%
Bootstrap support for Q753X8 as seed ortholog is 100%.
Bootstrap support for B8C5Y3 as seed ortholog is 100%.

Group of orthologs #958. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.pseudonana:134

Q755N5              	100.00%		B8C7X9              	100.00%
Bootstrap support for Q755N5 as seed ortholog is 96%.
Bootstrap support for B8C7X9 as seed ortholog is 100%.

Group of orthologs #959. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:84

Q757V0              	100.00%		B8C9V4              	100.00%
Bootstrap support for Q757V0 as seed ortholog is 100%.
Bootstrap support for B8C9V4 as seed ortholog is 98%.

Group of orthologs #960. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:57

Q75ER0              	100.00%		B8C811              	100.00%
Bootstrap support for Q75ER0 as seed ortholog is 100%.
Bootstrap support for B8C811 as seed ortholog is 99%.

Group of orthologs #961. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.pseudonana:134

Q75DY8              	100.00%		B8CCB5              	100.00%
Bootstrap support for Q75DY8 as seed ortholog is 100%.
Bootstrap support for B8CCB5 as seed ortholog is 100%.

Group of orthologs #962. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.pseudonana:26

Q750M2              	100.00%		B8BSP1              	100.00%
Bootstrap support for Q750M2 as seed ortholog is 90%.
Bootstrap support for B8BSP1 as seed ortholog is 71%.
Alternative seed ortholog is B8BZB2 (26 bits away from this cluster)

Group of orthologs #963. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q759X7              	100.00%		B5YNY5              	100.00%
Bootstrap support for Q759X7 as seed ortholog is 100%.
Bootstrap support for B5YNY5 as seed ortholog is 100%.

Group of orthologs #964. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q75B05              	100.00%		B8BWN8              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 100%.
Bootstrap support for B8BWN8 as seed ortholog is 100%.

Group of orthologs #965. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q75EL4              	100.00%		B8BTU5              	100.00%
Bootstrap support for Q75EL4 as seed ortholog is 100%.
Bootstrap support for B8BTU5 as seed ortholog is 100%.

Group of orthologs #966. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q751P9              	100.00%		B8C9K2              	100.00%
Bootstrap support for Q751P9 as seed ortholog is 100%.
Bootstrap support for B8C9K2 as seed ortholog is 100%.

Group of orthologs #967. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:42

Q75AV8              	100.00%		B8C3D4              	100.00%
Bootstrap support for Q75AV8 as seed ortholog is 100%.
Bootstrap support for B8C3D4 as seed ortholog is 94%.

Group of orthologs #968. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q757B6              	100.00%		B8C6G2              	100.00%
Bootstrap support for Q757B6 as seed ortholog is 100%.
Bootstrap support for B8C6G2 as seed ortholog is 100%.

Group of orthologs #969. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q75A50              	100.00%		B8CCQ0              	100.00%
Bootstrap support for Q75A50 as seed ortholog is 100%.
Bootstrap support for B8CCQ0 as seed ortholog is 100%.

Group of orthologs #970. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.pseudonana:133

Q75F63              	100.00%		B8LDM3              	100.00%
Bootstrap support for Q75F63 as seed ortholog is 100%.
Bootstrap support for B8LDM3 as seed ortholog is 100%.

Group of orthologs #971. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.pseudonana:59

Q757I9              	100.00%		B8CFL8              	100.00%
                    	       		B5YNE8              	9.36%
Bootstrap support for Q757I9 as seed ortholog is 100%.
Bootstrap support for B8CFL8 as seed ortholog is 97%.

Group of orthologs #972. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.pseudonana:132

Q758M0              	100.00%		B5YMF1              	100.00%
Bootstrap support for Q758M0 as seed ortholog is 100%.
Bootstrap support for B5YMF1 as seed ortholog is 100%.

Group of orthologs #973. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.pseudonana:132

Q75E22              	100.00%		B8CD96              	100.00%
Bootstrap support for Q75E22 as seed ortholog is 100%.
Bootstrap support for B8CD96 as seed ortholog is 100%.

Group of orthologs #974. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.pseudonana:85

Q752W1              	100.00%		B8BRP3              	100.00%
Bootstrap support for Q752W1 as seed ortholog is 100%.
Bootstrap support for B8BRP3 as seed ortholog is 99%.

Group of orthologs #975. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.pseudonana:131

Q758Y6              	100.00%		B8BXS3              	100.00%
Bootstrap support for Q758Y6 as seed ortholog is 100%.
Bootstrap support for B8BXS3 as seed ortholog is 100%.

Group of orthologs #976. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:8 T.pseudonana:5

Q754E6              	100.00%		B8C940              	100.00%
Bootstrap support for Q754E6 as seed ortholog is 63%.
Alternative seed ortholog is Q753E6 (8 bits away from this cluster)
Bootstrap support for B8C940 as seed ortholog is 57%.
Alternative seed ortholog is B8C1H0 (5 bits away from this cluster)

Group of orthologs #977. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.pseudonana:131

Q75D55              	100.00%		B8C4H2              	100.00%
Bootstrap support for Q75D55 as seed ortholog is 100%.
Bootstrap support for B8C4H2 as seed ortholog is 100%.

Group of orthologs #978. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:71

Q754Q8              	100.00%		B8CEK6              	100.00%
Bootstrap support for Q754Q8 as seed ortholog is 100%.
Bootstrap support for B8CEK6 as seed ortholog is 100%.

Group of orthologs #979. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.pseudonana:130

Q75AA3              	100.00%		B8CFB0              	100.00%
Bootstrap support for Q75AA3 as seed ortholog is 100%.
Bootstrap support for B8CFB0 as seed ortholog is 100%.

Group of orthologs #980. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:17

Q75CT5              	100.00%		B5YMF4              	100.00%
                    	       		B8C3W0              	17.30%
                    	       		B8C2U3              	14.49%
                    	       		B8LEM0              	14.13%
                    	       		B8C3U6              	13.68%
                    	       		B8BVK8              	9.60%
Bootstrap support for Q75CT5 as seed ortholog is 100%.
Bootstrap support for B5YMF4 as seed ortholog is 62%.
Alternative seed ortholog is B5YNX4 (17 bits away from this cluster)

Group of orthologs #981. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:8 T.pseudonana:33

Q75A20              	100.00%		B8BRI7              	100.00%
Bootstrap support for Q75A20 as seed ortholog is 56%.
Alternative seed ortholog is Q755P2 (8 bits away from this cluster)
Bootstrap support for B8BRI7 as seed ortholog is 81%.

Group of orthologs #982. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.pseudonana:129

Q753F6              	100.00%		B8C4Q4              	100.00%
Bootstrap support for Q753F6 as seed ortholog is 99%.
Bootstrap support for B8C4Q4 as seed ortholog is 100%.

Group of orthologs #983. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:129

Q75EW3              	100.00%		B8BVT1              	100.00%
Bootstrap support for Q75EW3 as seed ortholog is 100%.
Bootstrap support for B8BVT1 as seed ortholog is 100%.

Group of orthologs #984. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:129

Q751I7              	100.00%		B8C9W9              	100.00%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for B8C9W9 as seed ortholog is 100%.

Group of orthologs #985. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:129

Q751L1              	100.00%		B8C9Z3              	100.00%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for B8C9Z3 as seed ortholog is 100%.

Group of orthologs #986. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:129

Q75DR9              	100.00%		B8C3Q5              	100.00%
Bootstrap support for Q75DR9 as seed ortholog is 100%.
Bootstrap support for B8C3Q5 as seed ortholog is 100%.

Group of orthologs #987. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.pseudonana:129

Q75DR1              	100.00%		B8C5B0              	100.00%
Bootstrap support for Q75DR1 as seed ortholog is 100%.
Bootstrap support for B8C5B0 as seed ortholog is 100%.

Group of orthologs #988. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:128

Q74ZD2              	100.00%		B8BSH0              	100.00%
Bootstrap support for Q74ZD2 as seed ortholog is 100%.
Bootstrap support for B8BSH0 as seed ortholog is 100%.

Group of orthologs #989. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:128

Q755K1              	100.00%		B5YNA8              	100.00%
Bootstrap support for Q755K1 as seed ortholog is 100%.
Bootstrap support for B5YNA8 as seed ortholog is 100%.

Group of orthologs #990. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:128

Q74Z63              	100.00%		B8C104              	100.00%
Bootstrap support for Q74Z63 as seed ortholog is 100%.
Bootstrap support for B8C104 as seed ortholog is 100%.

Group of orthologs #991. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:59

Q754S1              	100.00%		B8BZL6              	100.00%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for B8BZL6 as seed ortholog is 91%.

Group of orthologs #992. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:128

Q75EG3              	100.00%		B8BVT4              	100.00%
Bootstrap support for Q75EG3 as seed ortholog is 100%.
Bootstrap support for B8BVT4 as seed ortholog is 100%.

Group of orthologs #993. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:128

Q758C3              	100.00%		B8C2U0              	100.00%
Bootstrap support for Q758C3 as seed ortholog is 100%.
Bootstrap support for B8C2U0 as seed ortholog is 100%.

Group of orthologs #994. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.pseudonana:128

Q755M7              	100.00%		B8LE08              	100.00%
Bootstrap support for Q755M7 as seed ortholog is 100%.
Bootstrap support for B8LE08 as seed ortholog is 100%.

Group of orthologs #995. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.pseudonana:33

Q75BL0              	100.00%		B8CDJ2              	100.00%
                    	       		B5YMA7              	37.88%
                    	       		B8BWD0              	28.18%
Bootstrap support for Q75BL0 as seed ortholog is 100%.
Bootstrap support for B8CDJ2 as seed ortholog is 79%.

Group of orthologs #996. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.pseudonana:127

Q756T5              	100.00%		B8BV79              	100.00%
Bootstrap support for Q756T5 as seed ortholog is 100%.
Bootstrap support for B8BV79 as seed ortholog is 100%.

Group of orthologs #997. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.pseudonana:127

Q75DB6              	100.00%		B8CA05              	100.00%
Bootstrap support for Q75DB6 as seed ortholog is 100%.
Bootstrap support for B8CA05 as seed ortholog is 100%.

Group of orthologs #998. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:126

Q758Z9              	100.00%		B8BSV8              	100.00%
Bootstrap support for Q758Z9 as seed ortholog is 100%.
Bootstrap support for B8BSV8 as seed ortholog is 100%.

Group of orthologs #999. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:126

Q758Q3              	100.00%		B8C029              	100.00%
Bootstrap support for Q758Q3 as seed ortholog is 100%.
Bootstrap support for B8C029 as seed ortholog is 100%.

Group of orthologs #1000. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:126

Q752U5              	100.00%		B8C7B0              	100.00%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for B8C7B0 as seed ortholog is 100%.

Group of orthologs #1001. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:6 T.pseudonana:126

Q759W8              	100.00%		B8C628              	100.00%
Bootstrap support for Q759W8 as seed ortholog is 55%.
Alternative seed ortholog is Q758Z5 (6 bits away from this cluster)
Bootstrap support for B8C628 as seed ortholog is 100%.

Group of orthologs #1002. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.pseudonana:126

Q756H4              	100.00%		B8LCI8              	100.00%
Bootstrap support for Q756H4 as seed ortholog is 100%.
Bootstrap support for B8LCI8 as seed ortholog is 100%.

Group of orthologs #1003. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.pseudonana:125

Q756P4              	100.00%		B8C5F4              	100.00%
Bootstrap support for Q756P4 as seed ortholog is 100%.
Bootstrap support for B8C5F4 as seed ortholog is 100%.

Group of orthologs #1004. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.pseudonana:23

Q754K8              	100.00%		B8C7M8              	100.00%
Bootstrap support for Q754K8 as seed ortholog is 100%.
Bootstrap support for B8C7M8 as seed ortholog is 85%.

Group of orthologs #1005. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.pseudonana:125

Q75F60              	100.00%		B8C5H6              	100.00%
Bootstrap support for Q75F60 as seed ortholog is 100%.
Bootstrap support for B8C5H6 as seed ortholog is 100%.

Group of orthologs #1006. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.pseudonana:125

Q75AA1              	100.00%		B8CCB6              	100.00%
Bootstrap support for Q75AA1 as seed ortholog is 100%.
Bootstrap support for B8CCB6 as seed ortholog is 100%.

Group of orthologs #1007. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q751L6              	100.00%		B8C012              	100.00%
Bootstrap support for Q751L6 as seed ortholog is 100%.
Bootstrap support for B8C012 as seed ortholog is 100%.

Group of orthologs #1008. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.pseudonana:45

Q75F71              	100.00%		B5YNE9              	100.00%
Bootstrap support for Q75F71 as seed ortholog is 95%.
Bootstrap support for B5YNE9 as seed ortholog is 95%.

Group of orthologs #1009. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q75F31              	100.00%		B8BTM0              	100.00%
Bootstrap support for Q75F31 as seed ortholog is 100%.
Bootstrap support for B8BTM0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q75EH7              	100.00%		B8BZI9              	100.00%
Bootstrap support for Q75EH7 as seed ortholog is 100%.
Bootstrap support for B8BZI9 as seed ortholog is 100%.

Group of orthologs #1011. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q75DI4              	100.00%		B8C138              	100.00%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for B8C138 as seed ortholog is 100%.

Group of orthologs #1012. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q75AS8              	100.00%		B8C3T8              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for B8C3T8 as seed ortholog is 100%.

Group of orthologs #1013. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q753B3              	100.00%		B8CEY0              	100.00%
Bootstrap support for Q753B3 as seed ortholog is 100%.
Bootstrap support for B8CEY0 as seed ortholog is 100%.

Group of orthologs #1014. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:124

Q75EQ5              	100.00%		B8C7U7              	100.00%
Bootstrap support for Q75EQ5 as seed ortholog is 100%.
Bootstrap support for B8C7U7 as seed ortholog is 100%.

Group of orthologs #1015. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.pseudonana:54

Q75AV7              	100.00%		B8CCR3              	100.00%
Bootstrap support for Q75AV7 as seed ortholog is 100%.
Bootstrap support for B8CCR3 as seed ortholog is 93%.

Group of orthologs #1016. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:123

Q757K9              	100.00%		B5YMT4              	100.00%
Q75DN9              	10.35%		B8BWA0              	5.42%
Bootstrap support for Q757K9 as seed ortholog is 100%.
Bootstrap support for B5YMT4 as seed ortholog is 100%.

Group of orthologs #1017. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:12

Q752A0              	100.00%		B8BVI2              	100.00%
Bootstrap support for Q752A0 as seed ortholog is 94%.
Bootstrap support for B8BVI2 as seed ortholog is 64%.
Alternative seed ortholog is B8BXT5 (12 bits away from this cluster)

Group of orthologs #1018. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:56

Q757R0              	100.00%		B8BU38              	100.00%
Bootstrap support for Q757R0 as seed ortholog is 100%.
Bootstrap support for B8BU38 as seed ortholog is 94%.

Group of orthologs #1019. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:83

Q75B80              	100.00%		B8BX56              	100.00%
Bootstrap support for Q75B80 as seed ortholog is 100%.
Bootstrap support for B8BX56 as seed ortholog is 99%.

Group of orthologs #1020. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:62

Q756D0              	100.00%		B8C562              	100.00%
Bootstrap support for Q756D0 as seed ortholog is 100%.
Bootstrap support for B8C562 as seed ortholog is 91%.

Group of orthologs #1021. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:123

Q751S0              	100.00%		B8CAQ2              	100.00%
Bootstrap support for Q751S0 as seed ortholog is 100%.
Bootstrap support for B8CAQ2 as seed ortholog is 100%.

Group of orthologs #1022. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:123

Q759X9              	100.00%		B8CBF3              	100.00%
Bootstrap support for Q759X9 as seed ortholog is 100%.
Bootstrap support for B8CBF3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.pseudonana:123

Q75CK4              	100.00%		B8CDJ5              	100.00%
Bootstrap support for Q75CK4 as seed ortholog is 100%.
Bootstrap support for B8CDJ5 as seed ortholog is 100%.

Group of orthologs #1024. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.pseudonana:122

Q74Z11              	100.00%		B8BW28              	100.00%
Bootstrap support for Q74Z11 as seed ortholog is 100%.
Bootstrap support for B8BW28 as seed ortholog is 100%.

Group of orthologs #1025. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.pseudonana:70

Q75D68              	100.00%		B8C7V6              	100.00%
Bootstrap support for Q75D68 as seed ortholog is 100%.
Bootstrap support for B8C7V6 as seed ortholog is 99%.

Group of orthologs #1026. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.pseudonana:122

Q75BU9              	100.00%		B8C9Q0              	100.00%
Bootstrap support for Q75BU9 as seed ortholog is 100%.
Bootstrap support for B8C9Q0 as seed ortholog is 100%.

Group of orthologs #1027. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:30

Q750M6              	100.00%		B8BZB6              	100.00%
                    	       		B8C3Q6              	11.43%
Bootstrap support for Q750M6 as seed ortholog is 100%.
Bootstrap support for B8BZB6 as seed ortholog is 86%.

Group of orthologs #1028. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:19

Q755H7              	100.00%		B8C0F1              	100.00%
                    	       		B8BUI7              	48.80%
Bootstrap support for Q755H7 as seed ortholog is 100%.
Bootstrap support for B8C0F1 as seed ortholog is 71%.
Alternative seed ortholog is B8LEN8 (19 bits away from this cluster)

Group of orthologs #1029. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:69

Q75E82              	100.00%		B8BUY2              	100.00%
Bootstrap support for Q75E82 as seed ortholog is 100%.
Bootstrap support for B8BUY2 as seed ortholog is 99%.

Group of orthologs #1030. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:121

Q753Q2              	100.00%		B8C460              	100.00%
Bootstrap support for Q753Q2 as seed ortholog is 100%.
Bootstrap support for B8C460 as seed ortholog is 100%.

Group of orthologs #1031. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:121

Q751B5              	100.00%		B8CDB4              	100.00%
Bootstrap support for Q751B5 as seed ortholog is 100%.
Bootstrap support for B8CDB4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.pseudonana:121

Q759I0              	100.00%		B8CEK1              	100.00%
Bootstrap support for Q759I0 as seed ortholog is 100%.
Bootstrap support for B8CEK1 as seed ortholog is 100%.

Group of orthologs #1033. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:30 T.pseudonana:14

Q75DP0              	100.00%		B8BYN5              	100.00%
                    	       		B8BSF4              	31.52%
Bootstrap support for Q75DP0 as seed ortholog is 71%.
Alternative seed ortholog is Q75CE7 (30 bits away from this cluster)
Bootstrap support for B8BYN5 as seed ortholog is 63%.
Alternative seed ortholog is B5YM46 (14 bits away from this cluster)

Group of orthologs #1034. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.pseudonana:120

Q751I5              	100.00%		B8BQB2              	100.00%
Bootstrap support for Q751I5 as seed ortholog is 100%.
Bootstrap support for B8BQB2 as seed ortholog is 100%.

Group of orthologs #1035. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.pseudonana:120

Q752G1              	100.00%		B8C052              	100.00%
Bootstrap support for Q752G1 as seed ortholog is 100%.
Bootstrap support for B8C052 as seed ortholog is 100%.

Group of orthologs #1036. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:38

Q754P8              	100.00%		B5YN24              	100.00%
Bootstrap support for Q754P8 as seed ortholog is 100%.
Bootstrap support for B5YN24 as seed ortholog is 86%.

Group of orthologs #1037. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q74ZQ1              	100.00%		B8BV69              	100.00%
Bootstrap support for Q74ZQ1 as seed ortholog is 100%.
Bootstrap support for B8BV69 as seed ortholog is 100%.

Group of orthologs #1038. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75AL9              	100.00%		B8BQ96              	100.00%
Bootstrap support for Q75AL9 as seed ortholog is 100%.
Bootstrap support for B8BQ96 as seed ortholog is 100%.

Group of orthologs #1039. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:39

Q753Q5              	100.00%		B8BX67              	100.00%
Bootstrap support for Q753Q5 as seed ortholog is 100%.
Bootstrap support for B8BX67 as seed ortholog is 94%.

Group of orthologs #1040. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:15

Q75E17              	100.00%		B8BRS9              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 100%.
Bootstrap support for B8BRS9 as seed ortholog is 75%.

Group of orthologs #1041. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75DL3              	100.00%		B8BUA7              	100.00%
Bootstrap support for Q75DL3 as seed ortholog is 100%.
Bootstrap support for B8BUA7 as seed ortholog is 100%.

Group of orthologs #1042. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75C42              	100.00%		B8BW62              	100.00%
Bootstrap support for Q75C42 as seed ortholog is 100%.
Bootstrap support for B8BW62 as seed ortholog is 100%.

Group of orthologs #1043. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75DD3              	100.00%		B8BXU2              	100.00%
Bootstrap support for Q75DD3 as seed ortholog is 100%.
Bootstrap support for B8BXU2 as seed ortholog is 100%.

Group of orthologs #1044. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75AB2              	100.00%		B8C6V5              	100.00%
Bootstrap support for Q75AB2 as seed ortholog is 100%.
Bootstrap support for B8C6V5 as seed ortholog is 100%.

Group of orthologs #1045. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q755E6              	100.00%		B8CE98              	100.00%
Bootstrap support for Q755E6 as seed ortholog is 100%.
Bootstrap support for B8CE98 as seed ortholog is 100%.

Group of orthologs #1046. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75C52              	100.00%		B8CCJ1              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for B8CCJ1 as seed ortholog is 100%.

Group of orthologs #1047. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.pseudonana:119

Q75DK9              	100.00%		B8LCP9              	100.00%
Bootstrap support for Q75DK9 as seed ortholog is 100%.
Bootstrap support for B8LCP9 as seed ortholog is 100%.

Group of orthologs #1048. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:118

Q752C7              	100.00%		B8BT55              	100.00%
Bootstrap support for Q752C7 as seed ortholog is 100%.
Bootstrap support for B8BT55 as seed ortholog is 100%.

Group of orthologs #1049. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:118

Q75A17              	100.00%		B8C6S7              	100.00%
Bootstrap support for Q75A17 as seed ortholog is 100%.
Bootstrap support for B8C6S7 as seed ortholog is 100%.

Group of orthologs #1050. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:118

Q752U4              	100.00%		B8CE47              	100.00%
Bootstrap support for Q752U4 as seed ortholog is 100%.
Bootstrap support for B8CE47 as seed ortholog is 100%.

Group of orthologs #1051. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:118

Q752R9              	100.00%		B8CET0              	100.00%
Bootstrap support for Q752R9 as seed ortholog is 100%.
Bootstrap support for B8CET0 as seed ortholog is 100%.

Group of orthologs #1052. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:118

Q75A75              	100.00%		B8CA67              	100.00%
Bootstrap support for Q75A75 as seed ortholog is 100%.
Bootstrap support for B8CA67 as seed ortholog is 100%.

Group of orthologs #1053. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.pseudonana:118

Q75EG8              	100.00%		B8C9U1              	100.00%
Bootstrap support for Q75EG8 as seed ortholog is 100%.
Bootstrap support for B8C9U1 as seed ortholog is 100%.

Group of orthologs #1054. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:9 T.pseudonana:54

Q74Z22              	100.00%		B8LDD8              	100.00%
Bootstrap support for Q74Z22 as seed ortholog is 57%.
Alternative seed ortholog is Q759K2 (9 bits away from this cluster)
Bootstrap support for B8LDD8 as seed ortholog is 88%.

Group of orthologs #1055. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 T.pseudonana:117

Q75BC2              	100.00%		B8CET6              	100.00%
Bootstrap support for Q75BC2 as seed ortholog is 100%.
Bootstrap support for B8CET6 as seed ortholog is 100%.

Group of orthologs #1056. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.pseudonana:116

Q75E68              	100.00%		B8CG82              	100.00%
Q752B5              	30.87%		
Bootstrap support for Q75E68 as seed ortholog is 100%.
Bootstrap support for B8CG82 as seed ortholog is 100%.

Group of orthologs #1057. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.pseudonana:116

Q74Z39              	100.00%		B8BS83              	100.00%
Bootstrap support for Q74Z39 as seed ortholog is 100%.
Bootstrap support for B8BS83 as seed ortholog is 100%.

Group of orthologs #1058. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:37 T.pseudonana:14

Q74Z36              	100.00%		B8BYB5              	100.00%
Bootstrap support for Q74Z36 as seed ortholog is 79%.
Bootstrap support for B8BYB5 as seed ortholog is 61%.
Alternative seed ortholog is B8C1B7 (14 bits away from this cluster)

Group of orthologs #1059. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.pseudonana:116

Q753Z0              	100.00%		B8BUU1              	100.00%
Bootstrap support for Q753Z0 as seed ortholog is 100%.
Bootstrap support for B8BUU1 as seed ortholog is 100%.

Group of orthologs #1060. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.pseudonana:116

Q75AK5              	100.00%		B8BZT2              	100.00%
Bootstrap support for Q75AK5 as seed ortholog is 100%.
Bootstrap support for B8BZT2 as seed ortholog is 100%.

Group of orthologs #1061. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.pseudonana:116

Q756R3              	100.00%		B8CFF2              	100.00%
Bootstrap support for Q756R3 as seed ortholog is 100%.
Bootstrap support for B8CFF2 as seed ortholog is 100%.

Group of orthologs #1062. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.pseudonana:116

Q75DS7              	100.00%		B8LDQ3              	100.00%
Bootstrap support for Q75DS7 as seed ortholog is 100%.
Bootstrap support for B8LDQ3 as seed ortholog is 100%.

Group of orthologs #1063. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.pseudonana:115

Q75AV1              	100.00%		B8C3J2              	100.00%
Bootstrap support for Q75AV1 as seed ortholog is 100%.
Bootstrap support for B8C3J2 as seed ortholog is 100%.

Group of orthologs #1064. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q75DL1              	100.00%		B8LEQ3              	100.00%
                    	       		A0T0Q8              	100.00%
Bootstrap support for Q75DL1 as seed ortholog is 100%.
Bootstrap support for B8LEQ3 as seed ortholog is 100%.
Bootstrap support for A0T0Q8 as seed ortholog is 100%.

Group of orthologs #1065. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:43

Q75C86              	100.00%		B5YM26              	100.00%
Bootstrap support for Q75C86 as seed ortholog is 100%.
Bootstrap support for B5YM26 as seed ortholog is 84%.

Group of orthologs #1066. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q751F8              	100.00%		B8BWF3              	100.00%
Bootstrap support for Q751F8 as seed ortholog is 100%.
Bootstrap support for B8BWF3 as seed ortholog is 100%.

Group of orthologs #1067. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q756C6              	100.00%		B8C0R1              	100.00%
Bootstrap support for Q756C6 as seed ortholog is 100%.
Bootstrap support for B8C0R1 as seed ortholog is 100%.

Group of orthologs #1068. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q758N0              	100.00%		B8C1A1              	100.00%
Bootstrap support for Q758N0 as seed ortholog is 100%.
Bootstrap support for B8C1A1 as seed ortholog is 100%.

Group of orthologs #1069. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q75EM8              	100.00%		B8BVW5              	100.00%
Bootstrap support for Q75EM8 as seed ortholog is 100%.
Bootstrap support for B8BVW5 as seed ortholog is 100%.

Group of orthologs #1070. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q75AU0              	100.00%		B8C2I4              	100.00%
Bootstrap support for Q75AU0 as seed ortholog is 100%.
Bootstrap support for B8C2I4 as seed ortholog is 100%.

Group of orthologs #1071. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:50

Q757U0              	100.00%		B8C7E6              	100.00%
Bootstrap support for Q757U0 as seed ortholog is 100%.
Bootstrap support for B8C7E6 as seed ortholog is 96%.

Group of orthologs #1072. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:114

Q74ZY7              	100.00%		B8CEJ8              	100.00%
Bootstrap support for Q74ZY7 as seed ortholog is 100%.
Bootstrap support for B8CEJ8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:22

Q75DT2              	100.00%		B8C822              	100.00%
Bootstrap support for Q75DT2 as seed ortholog is 100%.
Bootstrap support for B8C822 as seed ortholog is 70%.
Alternative seed ortholog is B8BQI4 (22 bits away from this cluster)

Group of orthologs #1074. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:62

Q75CL8              	100.00%		B8C994              	100.00%
Bootstrap support for Q75CL8 as seed ortholog is 100%.
Bootstrap support for B8C994 as seed ortholog is 95%.

Group of orthologs #1075. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.pseudonana:45

Q753W3              	100.00%		B8LE52              	100.00%
Bootstrap support for Q753W3 as seed ortholog is 100%.
Bootstrap support for B8LE52 as seed ortholog is 91%.

Group of orthologs #1076. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.pseudonana:113

Q75A25              	100.00%		B8CAG2              	100.00%
Bootstrap support for Q75A25 as seed ortholog is 100%.
Bootstrap support for B8CAG2 as seed ortholog is 100%.

Group of orthologs #1077. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.pseudonana:54

Q75EU7              	100.00%		B8CBN8              	100.00%
Bootstrap support for Q75EU7 as seed ortholog is 100%.
Bootstrap support for B8CBN8 as seed ortholog is 93%.

Group of orthologs #1078. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.pseudonana:112

Q75A09              	100.00%		B5YPA6              	100.00%
Bootstrap support for Q75A09 as seed ortholog is 100%.
Bootstrap support for B5YPA6 as seed ortholog is 100%.

Group of orthologs #1079. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.pseudonana:10

Q755J2              	100.00%		B8BTX8              	100.00%
Bootstrap support for Q755J2 as seed ortholog is 100%.
Bootstrap support for B8BTX8 as seed ortholog is 69%.
Alternative seed ortholog is B8BUQ3 (10 bits away from this cluster)

Group of orthologs #1080. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.pseudonana:112

Q757E9              	100.00%		B8LE06              	100.00%
Bootstrap support for Q757E9 as seed ortholog is 100%.
Bootstrap support for B8LE06 as seed ortholog is 100%.

Group of orthologs #1081. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.pseudonana:111

Q75CS6              	100.00%		B8BQK2              	100.00%
Bootstrap support for Q75CS6 as seed ortholog is 100%.
Bootstrap support for B8BQK2 as seed ortholog is 100%.

Group of orthologs #1082. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.pseudonana:111

Q75A97              	100.00%		B8CCB2              	100.00%
Bootstrap support for Q75A97 as seed ortholog is 100%.
Bootstrap support for B8CCB2 as seed ortholog is 100%.

Group of orthologs #1083. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.pseudonana:9

Q75CN9              	100.00%		B8LCS5              	100.00%
Bootstrap support for Q75CN9 as seed ortholog is 100%.
Bootstrap support for B8LCS5 as seed ortholog is 32%.
Alternative seed ortholog is B8CDP4 (9 bits away from this cluster)

Group of orthologs #1084. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.pseudonana:110

Q74Z09              	100.00%		B8BVF7              	100.00%
Bootstrap support for Q74Z09 as seed ortholog is 100%.
Bootstrap support for B8BVF7 as seed ortholog is 100%.

Group of orthologs #1085. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.pseudonana:110

Q756M8              	100.00%		B8C466              	100.00%
Bootstrap support for Q756M8 as seed ortholog is 100%.
Bootstrap support for B8C466 as seed ortholog is 100%.

Group of orthologs #1086. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:57

Q75C33              	100.00%		B8BUS7              	100.00%
                    	       		B8BUS8              	9.23%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for B8BUS7 as seed ortholog is 95%.

Group of orthologs #1087. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:109

Q752U6              	100.00%		B8BXX5              	100.00%
Bootstrap support for Q752U6 as seed ortholog is 100%.
Bootstrap support for B8BXX5 as seed ortholog is 100%.

Group of orthologs #1088. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:109

Q75EY1              	100.00%		B8BVF8              	100.00%
Bootstrap support for Q75EY1 as seed ortholog is 100%.
Bootstrap support for B8BVF8 as seed ortholog is 100%.

Group of orthologs #1089. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:109

Q753B1              	100.00%		B8CDJ9              	100.00%
Bootstrap support for Q753B1 as seed ortholog is 100%.
Bootstrap support for B8CDJ9 as seed ortholog is 100%.

Group of orthologs #1090. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:109

Q75EZ3              	100.00%		B8C8L2              	100.00%
Bootstrap support for Q75EZ3 as seed ortholog is 100%.
Bootstrap support for B8C8L2 as seed ortholog is 100%.

Group of orthologs #1091. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.pseudonana:109

Q75A65              	100.00%		B8CE85              	100.00%
Bootstrap support for Q75A65 as seed ortholog is 100%.
Bootstrap support for B8CE85 as seed ortholog is 100%.

Group of orthologs #1092. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:108

Q75DE2              	100.00%		B8BQS8              	100.00%
                    	       		B8BSE3              	9.06%
                    	       		B8LEG1              	6.33%
Bootstrap support for Q75DE2 as seed ortholog is 100%.
Bootstrap support for B8BQS8 as seed ortholog is 100%.

Group of orthologs #1093. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:108

Q75E32              	100.00%		B5YNZ6              	100.00%
Bootstrap support for Q75E32 as seed ortholog is 100%.
Bootstrap support for B5YNZ6 as seed ortholog is 100%.

Group of orthologs #1094. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:108

Q74ZD1              	100.00%		B8C6P1              	100.00%
Bootstrap support for Q74ZD1 as seed ortholog is 100%.
Bootstrap support for B8C6P1 as seed ortholog is 100%.

Group of orthologs #1095. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.pseudonana:108

Q758H7              	100.00%		B8C1W9              	100.00%
Bootstrap support for Q758H7 as seed ortholog is 100%.
Bootstrap support for B8C1W9 as seed ortholog is 100%.

Group of orthologs #1096. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:2 T.pseudonana:11

Q754C3              	100.00%		B8CGK8              	100.00%
Bootstrap support for Q754C3 as seed ortholog is 52%.
Alternative seed ortholog is Q75A82 (2 bits away from this cluster)
Bootstrap support for B8CGK8 as seed ortholog is 61%.
Alternative seed ortholog is B8BWQ4 (11 bits away from this cluster)

Group of orthologs #1097. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.pseudonana:35

Q750X7              	100.00%		B8C145              	100.00%
                    	       		B8LEC4              	35.99%
Bootstrap support for Q750X7 as seed ortholog is 100%.
Bootstrap support for B8C145 as seed ortholog is 85%.

Group of orthologs #1098. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.pseudonana:107

Q75BU2              	100.00%		B8BTT3              	100.00%
Bootstrap support for Q75BU2 as seed ortholog is 100%.
Bootstrap support for B8BTT3 as seed ortholog is 100%.

Group of orthologs #1099. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.pseudonana:107

Q755P0              	100.00%		B8BZR5              	100.00%
Bootstrap support for Q755P0 as seed ortholog is 100%.
Bootstrap support for B8BZR5 as seed ortholog is 100%.

Group of orthologs #1100. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.pseudonana:106

Q757D7              	100.00%		B8BUM0              	100.00%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for B8BUM0 as seed ortholog is 100%.

Group of orthologs #1101. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.pseudonana:106

Q759P0              	100.00%		B8C0E9              	100.00%
Bootstrap support for Q759P0 as seed ortholog is 99%.
Bootstrap support for B8C0E9 as seed ortholog is 100%.

Group of orthologs #1102. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.pseudonana:106

Q75C47              	100.00%		B8C5L6              	100.00%
Bootstrap support for Q75C47 as seed ortholog is 100%.
Bootstrap support for B8C5L6 as seed ortholog is 100%.

Group of orthologs #1103. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.pseudonana:106

Q75DI7              	100.00%		B8C627              	100.00%
Bootstrap support for Q75DI7 as seed ortholog is 100%.
Bootstrap support for B8C627 as seed ortholog is 100%.

Group of orthologs #1104. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.pseudonana:106

Q75DJ1              	100.00%		B8CCQ5              	100.00%
Bootstrap support for Q75DJ1 as seed ortholog is 100%.
Bootstrap support for B8CCQ5 as seed ortholog is 100%.

Group of orthologs #1105. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.pseudonana:106

Q75DP9              	100.00%		B8CEM8              	100.00%
Bootstrap support for Q75DP9 as seed ortholog is 100%.
Bootstrap support for B8CEM8 as seed ortholog is 100%.

Group of orthologs #1106. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.pseudonana:105

Q753B6              	100.00%		B8BSU9              	100.00%
Bootstrap support for Q753B6 as seed ortholog is 100%.
Bootstrap support for B8BSU9 as seed ortholog is 100%.

Group of orthologs #1107. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.pseudonana:64

Q752N2              	100.00%		B8BY13              	100.00%
Bootstrap support for Q752N2 as seed ortholog is 95%.
Bootstrap support for B8BY13 as seed ortholog is 98%.

Group of orthologs #1108. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.pseudonana:105

Q750C6              	100.00%		B8CB14              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 100%.
Bootstrap support for B8CB14 as seed ortholog is 100%.

Group of orthologs #1109. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.pseudonana:105

Q75B07              	100.00%		B8C5R5              	100.00%
Bootstrap support for Q75B07 as seed ortholog is 100%.
Bootstrap support for B8C5R5 as seed ortholog is 100%.

Group of orthologs #1110. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.pseudonana:16

Q752L3              	100.00%		B8CD37              	100.00%
Bootstrap support for Q752L3 as seed ortholog is 100%.
Bootstrap support for B8CD37 as seed ortholog is 70%.
Alternative seed ortholog is B8LDD7 (16 bits away from this cluster)

Group of orthologs #1111. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:104

Q757C0              	100.00%		B5YM00              	100.00%
Bootstrap support for Q757C0 as seed ortholog is 100%.
Bootstrap support for B5YM00 as seed ortholog is 100%.

Group of orthologs #1112. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:104

Q754Y9              	100.00%		B5YP25              	100.00%
Bootstrap support for Q754Y9 as seed ortholog is 100%.
Bootstrap support for B5YP25 as seed ortholog is 100%.

Group of orthologs #1113. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:104

Q753N1              	100.00%		B8BWP3              	100.00%
Bootstrap support for Q753N1 as seed ortholog is 100%.
Bootstrap support for B8BWP3 as seed ortholog is 100%.

Group of orthologs #1114. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:104

Q75AT3              	100.00%		B8C1W8              	100.00%
Bootstrap support for Q75AT3 as seed ortholog is 100%.
Bootstrap support for B8C1W8 as seed ortholog is 100%.

Group of orthologs #1115. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:104

Q75BZ2              	100.00%		B8C2M3              	100.00%
Bootstrap support for Q75BZ2 as seed ortholog is 100%.
Bootstrap support for B8C2M3 as seed ortholog is 100%.

Group of orthologs #1116. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.pseudonana:11

Q75DN6              	100.00%		B8CDD7              	100.00%
Bootstrap support for Q75DN6 as seed ortholog is 100%.
Bootstrap support for B8CDD7 as seed ortholog is 57%.
Alternative seed ortholog is B8C954 (11 bits away from this cluster)

Group of orthologs #1117. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.pseudonana:103

Q757X7              	100.00%		B8CB30              	100.00%
                    	       		B5YN56              	25.19%
Bootstrap support for Q757X7 as seed ortholog is 100%.
Bootstrap support for B8CB30 as seed ortholog is 100%.

Group of orthologs #1118. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.pseudonana:103

Q750F6              	100.00%		B8BTR1              	100.00%
Bootstrap support for Q750F6 as seed ortholog is 100%.
Bootstrap support for B8BTR1 as seed ortholog is 100%.

Group of orthologs #1119. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.pseudonana:103

Q75B47              	100.00%		B8C0Y0              	100.00%
Bootstrap support for Q75B47 as seed ortholog is 100%.
Bootstrap support for B8C0Y0 as seed ortholog is 100%.

Group of orthologs #1120. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.pseudonana:103

Q757Y3              	100.00%		B8C8D6              	100.00%
Bootstrap support for Q757Y3 as seed ortholog is 100%.
Bootstrap support for B8C8D6 as seed ortholog is 100%.

Group of orthologs #1121. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.pseudonana:102

Q755R1              	100.00%		B8BTV6              	100.00%
D8FGF0              	100.00%		
Bootstrap support for Q755R1 as seed ortholog is 100%.
Bootstrap support for D8FGF0 as seed ortholog is 100%.
Bootstrap support for B8BTV6 as seed ortholog is 100%.

Group of orthologs #1122. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.pseudonana:3

Q755E0              	100.00%		B5YMT3              	100.00%
Bootstrap support for Q755E0 as seed ortholog is 100%.
Bootstrap support for B5YMT3 as seed ortholog is 79%.

Group of orthologs #1123. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.pseudonana:102

Q74ZV7              	100.00%		B8C8H8              	100.00%
Bootstrap support for Q74ZV7 as seed ortholog is 100%.
Bootstrap support for B8C8H8 as seed ortholog is 100%.

Group of orthologs #1124. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.pseudonana:21

Q75DK1              	100.00%		B8CAC2              	100.00%
Bootstrap support for Q75DK1 as seed ortholog is 100%.
Bootstrap support for B8CAC2 as seed ortholog is 73%.
Alternative seed ortholog is B8BY16 (21 bits away from this cluster)

Group of orthologs #1125. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:5

Q751H3              	100.00%		B5YLN0              	100.00%
D8FGB8              	42.03%		
Q75BM0              	23.24%		
Q758K5              	19.90%		
Q75A70              	18.29%		
Bootstrap support for Q751H3 as seed ortholog is 100%.
Bootstrap support for B5YLN0 as seed ortholog is 52%.
Alternative seed ortholog is B8BWY7 (5 bits away from this cluster)

Group of orthologs #1126. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q75BV8              	100.00%		B8C402              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for B8C402 as seed ortholog is 100%.

Group of orthologs #1127. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q750K3              	100.00%		B8CDQ3              	100.00%
Bootstrap support for Q750K3 as seed ortholog is 100%.
Bootstrap support for B8CDQ3 as seed ortholog is 100%.

Group of orthologs #1128. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q75BQ0              	100.00%		B8C5H1              	100.00%
Bootstrap support for Q75BQ0 as seed ortholog is 100%.
Bootstrap support for B8C5H1 as seed ortholog is 100%.

Group of orthologs #1129. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q751B7              	100.00%		B8LCE8              	100.00%
Bootstrap support for Q751B7 as seed ortholog is 100%.
Bootstrap support for B8LCE8 as seed ortholog is 100%.

Group of orthologs #1130. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q75EP2              	100.00%		B8C7D9              	100.00%
Bootstrap support for Q75EP2 as seed ortholog is 100%.
Bootstrap support for B8C7D9 as seed ortholog is 100%.

Group of orthologs #1131. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q75DJ8              	100.00%		B8CCK1              	100.00%
Bootstrap support for Q75DJ8 as seed ortholog is 100%.
Bootstrap support for B8CCK1 as seed ortholog is 100%.

Group of orthologs #1132. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.pseudonana:101

Q75B13              	100.00%		B8CF48              	100.00%
Bootstrap support for Q75B13 as seed ortholog is 100%.
Bootstrap support for B8CF48 as seed ortholog is 100%.

Group of orthologs #1133. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.pseudonana:100

Q74ZE3              	100.00%		B8BTD3              	100.00%
Bootstrap support for Q74ZE3 as seed ortholog is 100%.
Bootstrap support for B8BTD3 as seed ortholog is 100%.

Group of orthologs #1134. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.pseudonana:15

Q754W2              	100.00%		B8C4Q0              	100.00%
Bootstrap support for Q754W2 as seed ortholog is 69%.
Alternative seed ortholog is Q75BI4 (55 bits away from this cluster)
Bootstrap support for B8C4Q0 as seed ortholog is 59%.
Alternative seed ortholog is B8CBC4 (15 bits away from this cluster)

Group of orthologs #1135. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.pseudonana:100

Q759B9              	100.00%		B8C6R8              	100.00%
Bootstrap support for Q759B9 as seed ortholog is 100%.
Bootstrap support for B8C6R8 as seed ortholog is 100%.

Group of orthologs #1136. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.pseudonana:99

Q75F24              	100.00%		B8CE13              	100.00%
                    	       		B8C6M4              	5.65%
Bootstrap support for Q75F24 as seed ortholog is 100%.
Bootstrap support for B8CE13 as seed ortholog is 100%.

Group of orthologs #1137. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.pseudonana:99

Q75A56              	100.00%		B8BYM4              	100.00%
Bootstrap support for Q75A56 as seed ortholog is 100%.
Bootstrap support for B8BYM4 as seed ortholog is 100%.

Group of orthologs #1138. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.pseudonana:99

Q75C81              	100.00%		B8C2C5              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 100%.
Bootstrap support for B8C2C5 as seed ortholog is 100%.

Group of orthologs #1139. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:40

Q75BV0              	100.00%		B8C1A6              	100.00%
Q75CX6              	31.63%		
Q75DB2              	31.12%		
Q75CX5              	30.36%		
Q75DB1              	29.59%		
Bootstrap support for Q75BV0 as seed ortholog is 100%.
Bootstrap support for B8C1A6 as seed ortholog is 91%.

Group of orthologs #1140. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q75EC8              	100.00%		B8BUM3              	100.00%
Q758I2              	20.00%		
Bootstrap support for Q75EC8 as seed ortholog is 100%.
Bootstrap support for B8BUM3 as seed ortholog is 100%.

Group of orthologs #1141. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q750Q2              	100.00%		B8C064              	100.00%
Bootstrap support for Q750Q2 as seed ortholog is 100%.
Bootstrap support for B8C064 as seed ortholog is 100%.

Group of orthologs #1142. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q752L4              	100.00%		B8C0C5              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for B8C0C5 as seed ortholog is 100%.

Group of orthologs #1143. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q75EL5              	100.00%		B8BT60              	100.00%
Bootstrap support for Q75EL5 as seed ortholog is 100%.
Bootstrap support for B8BT60 as seed ortholog is 100%.

Group of orthologs #1144. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:1 T.pseudonana:98

Q74Z17              	100.00%		B8C6R7              	100.00%
Bootstrap support for Q74Z17 as seed ortholog is 85%.
Bootstrap support for B8C6R7 as seed ortholog is 100%.

Group of orthologs #1145. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q75BA9              	100.00%		B8C3K5              	100.00%
Bootstrap support for Q75BA9 as seed ortholog is 100%.
Bootstrap support for B8C3K5 as seed ortholog is 100%.

Group of orthologs #1146. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q75AA9              	100.00%		B8C5G5              	100.00%
Bootstrap support for Q75AA9 as seed ortholog is 100%.
Bootstrap support for B8C5G5 as seed ortholog is 100%.

Group of orthologs #1147. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q74ZQ7              	100.00%		B8CGD5              	100.00%
Bootstrap support for Q74ZQ7 as seed ortholog is 100%.
Bootstrap support for B8CGD5 as seed ortholog is 100%.

Group of orthologs #1148. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.pseudonana:98

Q75BZ9              	100.00%		B8C8U7              	100.00%
Bootstrap support for Q75BZ9 as seed ortholog is 100%.
Bootstrap support for B8C8U7 as seed ortholog is 100%.

Group of orthologs #1149. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.pseudonana:97

Q752V8              	100.00%		B5YLF5              	100.00%
Q752Y6              	7.27%		
Bootstrap support for Q752V8 as seed ortholog is 100%.
Bootstrap support for B5YLF5 as seed ortholog is 100%.

Group of orthologs #1150. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.pseudonana:97

Q751K2              	100.00%		B8LDZ7              	100.00%
                    	       		B8LDZ9              	98.97%
Bootstrap support for Q751K2 as seed ortholog is 100%.
Bootstrap support for B8LDZ7 as seed ortholog is 100%.

Group of orthologs #1151. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.pseudonana:97

Q753N4              	100.00%		B8BQK4              	100.00%
Bootstrap support for Q753N4 as seed ortholog is 100%.
Bootstrap support for B8BQK4 as seed ortholog is 100%.

Group of orthologs #1152. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.pseudonana:97

Q75BX4              	100.00%		B8BVJ6              	100.00%
Bootstrap support for Q75BX4 as seed ortholog is 100%.
Bootstrap support for B8BVJ6 as seed ortholog is 100%.

Group of orthologs #1153. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.pseudonana:97

Q75C74              	100.00%		B8C5A0              	100.00%
Bootstrap support for Q75C74 as seed ortholog is 100%.
Bootstrap support for B8C5A0 as seed ortholog is 100%.

Group of orthologs #1154. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:14

Q753T7              	100.00%		B8LD15              	100.00%
                    	       		B8BYR2              	9.75%
Bootstrap support for Q753T7 as seed ortholog is 100%.
Bootstrap support for B8LD15 as seed ortholog is 69%.
Alternative seed ortholog is B8BTD9 (14 bits away from this cluster)

Group of orthologs #1155. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:4

Q755B4              	100.00%		B8LCT7              	100.00%
                    	       		B8BUU9              	9.70%
Bootstrap support for Q755B4 as seed ortholog is 100%.
Bootstrap support for B8LCT7 as seed ortholog is 67%.
Alternative seed ortholog is A0T0Q7 (4 bits away from this cluster)

Group of orthologs #1156. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:96

Q750P9              	100.00%		B5YMU5              	100.00%
Bootstrap support for Q750P9 as seed ortholog is 100%.
Bootstrap support for B5YMU5 as seed ortholog is 100%.

Group of orthologs #1157. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:96

Q74Z32              	100.00%		B8BWG3              	100.00%
Bootstrap support for Q74Z32 as seed ortholog is 100%.
Bootstrap support for B8BWG3 as seed ortholog is 100%.

Group of orthologs #1158. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:96

Q753U1              	100.00%		B8BTU1              	100.00%
Bootstrap support for Q753U1 as seed ortholog is 100%.
Bootstrap support for B8BTU1 as seed ortholog is 100%.

Group of orthologs #1159. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:52

Q759T0              	100.00%		B8C706              	100.00%
Bootstrap support for Q759T0 as seed ortholog is 100%.
Bootstrap support for B8C706 as seed ortholog is 99%.

Group of orthologs #1160. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:52

Q754L9              	100.00%		B8CE82              	100.00%
Bootstrap support for Q754L9 as seed ortholog is 100%.
Bootstrap support for B8CE82 as seed ortholog is 99%.

Group of orthologs #1161. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.pseudonana:96

Q75DB7              	100.00%		B8CCG9              	100.00%
Bootstrap support for Q75DB7 as seed ortholog is 100%.
Bootstrap support for B8CCG9 as seed ortholog is 100%.

Group of orthologs #1162. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.pseudonana:95

Q756J2              	100.00%		B8LC72              	100.00%
                    	       		B8CD86              	21.36%
Bootstrap support for Q756J2 as seed ortholog is 90%.
Bootstrap support for B8LC72 as seed ortholog is 100%.

Group of orthologs #1163. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.pseudonana:95

Q75AQ0              	100.00%		A0T0Y7              	100.00%
Bootstrap support for Q75AQ0 as seed ortholog is 100%.
Bootstrap support for A0T0Y7 as seed ortholog is 100%.

Group of orthologs #1164. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.pseudonana:95

Q752K5              	100.00%		B8C179              	100.00%
Bootstrap support for Q752K5 as seed ortholog is 100%.
Bootstrap support for B8C179 as seed ortholog is 100%.

Group of orthologs #1165. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.pseudonana:95

Q756A6              	100.00%		B8C041              	100.00%
Bootstrap support for Q756A6 as seed ortholog is 100%.
Bootstrap support for B8C041 as seed ortholog is 100%.

Group of orthologs #1166. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.pseudonana:95

Q75BW7              	100.00%		B8C9G4              	100.00%
Bootstrap support for Q75BW7 as seed ortholog is 100%.
Bootstrap support for B8C9G4 as seed ortholog is 100%.

Group of orthologs #1167. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.pseudonana:95

Q75B46              	100.00%		B8CDS4              	100.00%
Bootstrap support for Q75B46 as seed ortholog is 100%.
Bootstrap support for B8CDS4 as seed ortholog is 100%.

Group of orthologs #1168. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:94

Q75CG4              	100.00%		B8C399              	100.00%
                    	       		B5YLN2              	75.41%
Bootstrap support for Q75CG4 as seed ortholog is 100%.
Bootstrap support for B8C399 as seed ortholog is 100%.

Group of orthologs #1169. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:94

Q752Z2              	100.00%		B5YMH0              	100.00%
Bootstrap support for Q752Z2 as seed ortholog is 100%.
Bootstrap support for B5YMH0 as seed ortholog is 100%.

Group of orthologs #1170. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:94

Q756E2              	100.00%		B5YNT3              	100.00%
Bootstrap support for Q756E2 as seed ortholog is 100%.
Bootstrap support for B5YNT3 as seed ortholog is 100%.

Group of orthologs #1171. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.pseudonana:94

Q75F67              	100.00%		B5YMG3              	100.00%
Bootstrap support for Q75F67 as seed ortholog is 100%.
Bootstrap support for B5YMG3 as seed ortholog is 100%.

Group of orthologs #1172. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.pseudonana:93

Q75FB0              	100.00%		B8BY17              	100.00%
                    	       		B8BQW5              	23.10%
                    	       		B8C7U8              	17.99%
                    	       		B5YMN6              	16.90%
                    	       		B8BQN5              	15.23%
                    	       		B5YNW0              	12.89%
                    	       		B8CAG5              	12.72%
                    	       		B5YNW4              	11.05%
                    	       		B8C8P6              	9.79%
Bootstrap support for Q75FB0 as seed ortholog is 100%.
Bootstrap support for B8BY17 as seed ortholog is 100%.

Group of orthologs #1173. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.pseudonana:93

Q75A69              	100.00%		B8BUQ2              	100.00%
Q759B8              	14.46%		
Bootstrap support for Q75A69 as seed ortholog is 100%.
Bootstrap support for B8BUQ2 as seed ortholog is 100%.

Group of orthologs #1174. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.pseudonana:93

Q74ZC2              	100.00%		B8CCM0              	100.00%
Bootstrap support for Q74ZC2 as seed ortholog is 100%.
Bootstrap support for B8CCM0 as seed ortholog is 100%.

Group of orthologs #1175. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.pseudonana:93

Q750Y9              	100.00%		B8CES5              	100.00%
Bootstrap support for Q750Y9 as seed ortholog is 100%.
Bootstrap support for B8CES5 as seed ortholog is 100%.

Group of orthologs #1176. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.pseudonana:93

Q75A14              	100.00%		B8CC34              	100.00%
Bootstrap support for Q75A14 as seed ortholog is 100%.
Bootstrap support for B8CC34 as seed ortholog is 100%.

Group of orthologs #1177. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:92

Q758K6              	100.00%		B8C325              	100.00%
Q75AN1              	23.17%		B8BU90              	15.73%
Bootstrap support for Q758K6 as seed ortholog is 100%.
Bootstrap support for B8C325 as seed ortholog is 100%.

Group of orthologs #1178. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:92

Q751N7              	100.00%		B8C5T2              	100.00%
                    	       		B8C5T3              	40.29%
Bootstrap support for Q751N7 as seed ortholog is 100%.
Bootstrap support for B8C5T2 as seed ortholog is 100%.

Group of orthologs #1179. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:92

Q757N0              	100.00%		B5YP89              	100.00%
Bootstrap support for Q757N0 as seed ortholog is 100%.
Bootstrap support for B5YP89 as seed ortholog is 100%.

Group of orthologs #1180. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:3

Q750K4              	100.00%		B8BV13              	100.00%
Bootstrap support for Q750K4 as seed ortholog is 100%.
Bootstrap support for B8BV13 as seed ortholog is 44%.
Alternative seed ortholog is B8C5V4 (3 bits away from this cluster)

Group of orthologs #1181. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:9

Q751W7              	100.00%		B8BU58              	100.00%
Bootstrap support for Q751W7 as seed ortholog is 100%.
Bootstrap support for B8BU58 as seed ortholog is 64%.
Alternative seed ortholog is B8BZ47 (9 bits away from this cluster)

Group of orthologs #1182. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:92

Q756D2              	100.00%		B8BU66              	100.00%
Bootstrap support for Q756D2 as seed ortholog is 100%.
Bootstrap support for B8BU66 as seed ortholog is 100%.

Group of orthologs #1183. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:30 T.pseudonana:92

Q755G2              	100.00%		B8BWQ6              	100.00%
Bootstrap support for Q755G2 as seed ortholog is 95%.
Bootstrap support for B8BWQ6 as seed ortholog is 100%.

Group of orthologs #1184. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.pseudonana:41

E7FHS1              	100.00%		B8C2A4              	100.00%
Bootstrap support for E7FHS1 as seed ortholog is 100%.
Bootstrap support for B8C2A4 as seed ortholog is 88%.

Group of orthologs #1185. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:10 T.pseudonana:8

Q75CQ0              	100.00%		B8C324              	100.00%
Bootstrap support for Q75CQ0 as seed ortholog is 70%.
Alternative seed ortholog is Q751D5 (10 bits away from this cluster)
Bootstrap support for B8C324 as seed ortholog is 80%.

Group of orthologs #1186. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:20 T.pseudonana:91

Q757X9              	100.00%		A0T0Y3              	100.00%
Bootstrap support for Q757X9 as seed ortholog is 81%.
Bootstrap support for A0T0Y3 as seed ortholog is 100%.

Group of orthologs #1187. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:91

Q758H5              	100.00%		B8BTG5              	100.00%
Bootstrap support for Q758H5 as seed ortholog is 100%.
Bootstrap support for B8BTG5 as seed ortholog is 100%.

Group of orthologs #1188. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:91

Q758C7              	100.00%		B8C494              	100.00%
Bootstrap support for Q758C7 as seed ortholog is 100%.
Bootstrap support for B8C494 as seed ortholog is 100%.

Group of orthologs #1189. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:20

Q751L5              	100.00%		B8CAN7              	100.00%
Bootstrap support for Q751L5 as seed ortholog is 100%.
Bootstrap support for B8CAN7 as seed ortholog is 69%.
Alternative seed ortholog is B8BTW9 (20 bits away from this cluster)

Group of orthologs #1190. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:91

Q752P7              	100.00%		B8CBP4              	100.00%
Bootstrap support for Q752P7 as seed ortholog is 100%.
Bootstrap support for B8CBP4 as seed ortholog is 100%.

Group of orthologs #1191. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.pseudonana:29

Q75F17              	100.00%		B8C376              	100.00%
Bootstrap support for Q75F17 as seed ortholog is 100%.
Bootstrap support for B8C376 as seed ortholog is 78%.

Group of orthologs #1192. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.pseudonana:14

Q75B82              	100.00%		B8BTE0              	100.00%
                    	       		B8CA06              	32.97%
Bootstrap support for Q75B82 as seed ortholog is 100%.
Bootstrap support for B8BTE0 as seed ortholog is 84%.

Group of orthologs #1193. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.pseudonana:90

Q754U1              	100.00%		B8BW09              	100.00%
Bootstrap support for Q754U1 as seed ortholog is 100%.
Bootstrap support for B8BW09 as seed ortholog is 100%.

Group of orthologs #1194. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.pseudonana:90

Q756H1              	100.00%		B8C3N1              	100.00%
Bootstrap support for Q756H1 as seed ortholog is 100%.
Bootstrap support for B8C3N1 as seed ortholog is 100%.

Group of orthologs #1195. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.pseudonana:90

Q757M2              	100.00%		B8C5H5              	100.00%
Bootstrap support for Q757M2 as seed ortholog is 100%.
Bootstrap support for B8C5H5 as seed ortholog is 100%.

Group of orthologs #1196. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.pseudonana:90

Q758Y2              	100.00%		B8C5A8              	100.00%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for B8C5A8 as seed ortholog is 100%.

Group of orthologs #1197. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.pseudonana:90

Q754T9              	100.00%		B8CAQ0              	100.00%
Bootstrap support for Q754T9 as seed ortholog is 100%.
Bootstrap support for B8CAQ0 as seed ortholog is 100%.

Group of orthologs #1198. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:89

Q74ZX8              	100.00%		B8LEQ4              	100.00%
                    	       		A0T0Q6              	100.00%
                    	       		B8C901              	9.89%
Bootstrap support for Q74ZX8 as seed ortholog is 100%.
Bootstrap support for B8LEQ4 as seed ortholog is 100%.
Bootstrap support for A0T0Q6 as seed ortholog is 100%.

Group of orthologs #1199. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:9

Q754F0              	100.00%		B8BUR3              	100.00%
                    	       		B8C443              	18.96%
Bootstrap support for Q754F0 as seed ortholog is 100%.
Bootstrap support for B8BUR3 as seed ortholog is 62%.
Alternative seed ortholog is B8C6I5 (9 bits away from this cluster)

Group of orthologs #1200. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:3 T.pseudonana:89

Q75C43              	100.00%		B8C4Z2              	100.00%
                    	       		B8C5U8              	30.71%
Bootstrap support for Q75C43 as seed ortholog is 63%.
Alternative seed ortholog is Q759R2 (3 bits away from this cluster)
Bootstrap support for B8C4Z2 as seed ortholog is 100%.

Group of orthologs #1201. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:89

Q753P0              	100.00%		B8C2G4              	100.00%
Bootstrap support for Q753P0 as seed ortholog is 100%.
Bootstrap support for B8C2G4 as seed ortholog is 100%.

Group of orthologs #1202. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:89

Q75F76              	100.00%		B8BT87              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for B8BT87 as seed ortholog is 100%.

Group of orthologs #1203. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:89

Q752I9              	100.00%		B8CBI0              	100.00%
Bootstrap support for Q752I9 as seed ortholog is 100%.
Bootstrap support for B8CBI0 as seed ortholog is 100%.

Group of orthologs #1204. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:45

Q758J7              	100.00%		B8C9U7              	100.00%
Bootstrap support for Q758J7 as seed ortholog is 100%.
Bootstrap support for B8C9U7 as seed ortholog is 99%.

Group of orthologs #1205. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.pseudonana:2

Q754G3              	100.00%		B8CE28              	100.00%
Bootstrap support for Q754G3 as seed ortholog is 100%.
Bootstrap support for B8CE28 as seed ortholog is 71%.
Alternative seed ortholog is B8BQR7 (2 bits away from this cluster)

Group of orthologs #1206. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.pseudonana:1

Q74Z69              	100.00%		B8C5D4              	100.00%
Bootstrap support for Q74Z69 as seed ortholog is 100%.
Bootstrap support for B8C5D4 as seed ortholog is 44%.
Alternative seed ortholog is B8C495 (1 bits away from this cluster)

Group of orthologs #1207. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.pseudonana:88

Q75A86              	100.00%		B8C5F2              	100.00%
Bootstrap support for Q75A86 as seed ortholog is 100%.
Bootstrap support for B8C5F2 as seed ortholog is 100%.

Group of orthologs #1208. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.pseudonana:88

Q756X3              	100.00%		B8CAM9              	100.00%
Bootstrap support for Q756X3 as seed ortholog is 100%.
Bootstrap support for B8CAM9 as seed ortholog is 100%.

Group of orthologs #1209. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.pseudonana:88

Q74ZD8              	100.00%		B8CGJ9              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for B8CGJ9 as seed ortholog is 100%.

Group of orthologs #1210. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.pseudonana:88

Q75BS7              	100.00%		B8C778              	100.00%
Bootstrap support for Q75BS7 as seed ortholog is 100%.
Bootstrap support for B8C778 as seed ortholog is 100%.

Group of orthologs #1211. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.pseudonana:88

Q752B1              	100.00%		B8LDL5              	100.00%
Bootstrap support for Q752B1 as seed ortholog is 100%.
Bootstrap support for B8LDL5 as seed ortholog is 100%.

Group of orthologs #1212. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.pseudonana:87

Q751W5              	100.00%		B8BTV0              	100.00%
                    	       		B8BTU3              	9.39%
Bootstrap support for Q751W5 as seed ortholog is 100%.
Bootstrap support for B8BTV0 as seed ortholog is 100%.

Group of orthologs #1213. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.pseudonana:87

Q753Q9              	100.00%		B8CBM0              	100.00%
                    	       		B8C8C0              	43.49%
Bootstrap support for Q753Q9 as seed ortholog is 100%.
Bootstrap support for B8CBM0 as seed ortholog is 100%.

Group of orthologs #1214. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.pseudonana:87

Q752M2              	100.00%		B8BVG7              	100.00%
Bootstrap support for Q752M2 as seed ortholog is 100%.
Bootstrap support for B8BVG7 as seed ortholog is 100%.

Group of orthologs #1215. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.pseudonana:87

Q75BS0              	100.00%		B8BV65              	100.00%
Bootstrap support for Q75BS0 as seed ortholog is 100%.
Bootstrap support for B8BV65 as seed ortholog is 100%.

Group of orthologs #1216. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.pseudonana:16

Q750R8              	100.00%		B8C6E5              	100.00%
Bootstrap support for Q750R8 as seed ortholog is 100%.
Bootstrap support for B8C6E5 as seed ortholog is 74%.
Alternative seed ortholog is B8C3F0 (16 bits away from this cluster)

Group of orthologs #1217. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.pseudonana:87

Q750K6              	100.00%		B8CEX4              	100.00%
Bootstrap support for Q750K6 as seed ortholog is 100%.
Bootstrap support for B8CEX4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q74ZR8              	100.00%		B8BRR0              	100.00%
Bootstrap support for Q74ZR8 as seed ortholog is 100%.
Bootstrap support for B8BRR0 as seed ortholog is 100%.

Group of orthologs #1219. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:32

Q750G6              	100.00%		B8BU89              	100.00%
Bootstrap support for Q750G6 as seed ortholog is 100%.
Bootstrap support for B8BU89 as seed ortholog is 92%.

Group of orthologs #1220. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q75AL1              	100.00%		B8BTR3              	100.00%
Bootstrap support for Q75AL1 as seed ortholog is 100%.
Bootstrap support for B8BTR3 as seed ortholog is 100%.

Group of orthologs #1221. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q753U8              	100.00%		B8BZE3              	100.00%
Bootstrap support for Q753U8 as seed ortholog is 100%.
Bootstrap support for B8BZE3 as seed ortholog is 100%.

Group of orthologs #1222. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q750K0              	100.00%		B8C4T8              	100.00%
Bootstrap support for Q750K0 as seed ortholog is 100%.
Bootstrap support for B8C4T8 as seed ortholog is 100%.

Group of orthologs #1223. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q75AA5              	100.00%		B8C3C1              	100.00%
Bootstrap support for Q75AA5 as seed ortholog is 100%.
Bootstrap support for B8C3C1 as seed ortholog is 100%.

Group of orthologs #1224. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q75CF1              	100.00%		B8C993              	100.00%
Bootstrap support for Q75CF1 as seed ortholog is 100%.
Bootstrap support for B8C993 as seed ortholog is 100%.

Group of orthologs #1225. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q75C08              	100.00%		B8CGC8              	100.00%
Bootstrap support for Q75C08 as seed ortholog is 100%.
Bootstrap support for B8CGC8 as seed ortholog is 100%.

Group of orthologs #1226. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.pseudonana:86

Q8NJR2              	100.00%		B8LBH2              	100.00%
Bootstrap support for Q8NJR2 as seed ortholog is 100%.
Bootstrap support for B8LBH2 as seed ortholog is 100%.

Group of orthologs #1227. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q751Q4              	100.00%		B8C6J9              	100.00%
Q753U7              	55.04%		B8C0Y1              	39.93%
Bootstrap support for Q751Q4 as seed ortholog is 100%.
Bootstrap support for B8C6J9 as seed ortholog is 100%.

Group of orthologs #1228. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q75AH9              	100.00%		B8BQ42              	100.00%
Bootstrap support for Q75AH9 as seed ortholog is 100%.
Bootstrap support for B8BQ42 as seed ortholog is 100%.

Group of orthologs #1229. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q755B3              	100.00%		B8BUI2              	100.00%
Bootstrap support for Q755B3 as seed ortholog is 100%.
Bootstrap support for B8BUI2 as seed ortholog is 100%.

Group of orthologs #1230. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q750W4              	100.00%		B8BYC9              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for B8BYC9 as seed ortholog is 100%.

Group of orthologs #1231. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q752F2              	100.00%		B8BYM9              	100.00%
Bootstrap support for Q752F2 as seed ortholog is 100%.
Bootstrap support for B8BYM9 as seed ortholog is 100%.

Group of orthologs #1232. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q75AD0              	100.00%		B8C3R1              	100.00%
Bootstrap support for Q75AD0 as seed ortholog is 100%.
Bootstrap support for B8C3R1 as seed ortholog is 100%.

Group of orthologs #1233. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q757J7              	100.00%		B8CBK3              	100.00%
Bootstrap support for Q757J7 as seed ortholog is 100%.
Bootstrap support for B8CBK3 as seed ortholog is 100%.

Group of orthologs #1234. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.pseudonana:85

Q75D70              	100.00%		B8CAZ4              	100.00%
Bootstrap support for Q75D70 as seed ortholog is 100%.
Bootstrap support for B8CAZ4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q754C5              	100.00%		B8BTG2              	100.00%
Q758U4              	37.19%		B8C7F9              	11.21%
Bootstrap support for Q754C5 as seed ortholog is 100%.
Bootstrap support for B8BTG2 as seed ortholog is 100%.

Group of orthologs #1236. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q751A9              	100.00%		B8C9B0              	100.00%
                    	       		B8CEV3              	11.69%
Bootstrap support for Q751A9 as seed ortholog is 100%.
Bootstrap support for B8C9B0 as seed ortholog is 100%.

Group of orthologs #1237. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q74ZB2              	100.00%		B8BQX6              	100.00%
Bootstrap support for Q74ZB2 as seed ortholog is 100%.
Bootstrap support for B8BQX6 as seed ortholog is 100%.

Group of orthologs #1238. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q758M6              	100.00%		B8BQA4              	100.00%
Bootstrap support for Q758M6 as seed ortholog is 100%.
Bootstrap support for B8BQA4 as seed ortholog is 100%.

Group of orthologs #1239. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q757N8              	100.00%		B8BUF8              	100.00%
Bootstrap support for Q757N8 as seed ortholog is 100%.
Bootstrap support for B8BUF8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:25

Q753W2              	100.00%		B8C5I2              	100.00%
Bootstrap support for Q753W2 as seed ortholog is 100%.
Bootstrap support for B8C5I2 as seed ortholog is 77%.

Group of orthologs #1241. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q75BL6              	100.00%		B8BZU9              	100.00%
Bootstrap support for Q75BL6 as seed ortholog is 100%.
Bootstrap support for B8BZU9 as seed ortholog is 100%.

Group of orthologs #1242. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q759N2              	100.00%		B8C9M3              	100.00%
Bootstrap support for Q759N2 as seed ortholog is 100%.
Bootstrap support for B8C9M3 as seed ortholog is 100%.

Group of orthologs #1243. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.pseudonana:84

Q758W6              	100.00%		B8CDP0              	100.00%
Bootstrap support for Q758W6 as seed ortholog is 100%.
Bootstrap support for B8CDP0 as seed ortholog is 100%.

Group of orthologs #1244. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.pseudonana:83

Q74ZF3              	100.00%		B8C1Q4              	100.00%
Bootstrap support for Q74ZF3 as seed ortholog is 100%.
Bootstrap support for B8C1Q4 as seed ortholog is 100%.

Group of orthologs #1245. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.pseudonana:83

Q750E4              	100.00%		B8C9G9              	100.00%
Bootstrap support for Q750E4 as seed ortholog is 100%.
Bootstrap support for B8C9G9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q75DV3              	100.00%		B8C6V8              	100.00%
                    	       		B8C240              	33.07%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for B8C6V8 as seed ortholog is 100%.

Group of orthologs #1247. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q755X6              	100.00%		B5YLW3              	100.00%
Bootstrap support for Q755X6 as seed ortholog is 100%.
Bootstrap support for B5YLW3 as seed ortholog is 100%.

Group of orthologs #1248. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q755N7              	100.00%		B8BRY7              	100.00%
Bootstrap support for Q755N7 as seed ortholog is 100%.
Bootstrap support for B8BRY7 as seed ortholog is 100%.

Group of orthologs #1249. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q74ZP5              	100.00%		B8C1F3              	100.00%
Bootstrap support for Q74ZP5 as seed ortholog is 100%.
Bootstrap support for B8C1F3 as seed ortholog is 100%.

Group of orthologs #1250. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q750Y2              	100.00%		B8C5R7              	100.00%
Bootstrap support for Q750Y2 as seed ortholog is 100%.
Bootstrap support for B8C5R7 as seed ortholog is 100%.

Group of orthologs #1251. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q74Z52              	100.00%		B8CAZ7              	100.00%
Bootstrap support for Q74Z52 as seed ortholog is 100%.
Bootstrap support for B8CAZ7 as seed ortholog is 100%.

Group of orthologs #1252. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q75BI3              	100.00%		B8C4H4              	100.00%
Bootstrap support for Q75BI3 as seed ortholog is 100%.
Bootstrap support for B8C4H4 as seed ortholog is 100%.

Group of orthologs #1253. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.pseudonana:82

Q756L8              	100.00%		B8CCL1              	100.00%
Bootstrap support for Q756L8 as seed ortholog is 100%.
Bootstrap support for B8CCL1 as seed ortholog is 100%.

Group of orthologs #1254. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:19

Q757A9              	100.00%		B8BXN5              	100.00%
                    	       		B8CF79              	6.99%
Bootstrap support for Q757A9 as seed ortholog is 100%.
Bootstrap support for B8BXN5 as seed ortholog is 74%.
Alternative seed ortholog is B5YNG7 (19 bits away from this cluster)

Group of orthologs #1255. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:81

Q75BU0              	100.00%		B8C360              	100.00%
                    	       		B5YMR4              	52.13%
Bootstrap support for Q75BU0 as seed ortholog is 100%.
Bootstrap support for B8C360 as seed ortholog is 100%.

Group of orthologs #1256. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:81

Q750U3              	100.00%		B8C4C6              	100.00%
Bootstrap support for Q750U3 as seed ortholog is 100%.
Bootstrap support for B8C4C6 as seed ortholog is 100%.

Group of orthologs #1257. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:19

Q757B0              	100.00%		B8C103              	100.00%
Bootstrap support for Q757B0 as seed ortholog is 100%.
Bootstrap support for B8C103 as seed ortholog is 89%.

Group of orthologs #1258. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:81

Q75AB4              	100.00%		B8C700              	100.00%
Bootstrap support for Q75AB4 as seed ortholog is 100%.
Bootstrap support for B8C700 as seed ortholog is 100%.

Group of orthologs #1259. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:81

Q75EU5              	100.00%		B8C5K6              	100.00%
Bootstrap support for Q75EU5 as seed ortholog is 100%.
Bootstrap support for B8C5K6 as seed ortholog is 100%.

Group of orthologs #1260. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.pseudonana:81

Q757Z6              	100.00%		B8CCH3              	100.00%
Bootstrap support for Q757Z6 as seed ortholog is 100%.
Bootstrap support for B8CCH3 as seed ortholog is 100%.

Group of orthologs #1261. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:8 T.pseudonana:80

Q753M7              	100.00%		B8BQ41              	100.00%
Bootstrap support for Q753M7 as seed ortholog is 71%.
Alternative seed ortholog is Q750X4 (8 bits away from this cluster)
Bootstrap support for B8BQ41 as seed ortholog is 100%.

Group of orthologs #1262. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.pseudonana:30

Q75DK4              	100.00%		B8BRE1              	100.00%
Bootstrap support for Q75DK4 as seed ortholog is 100%.
Bootstrap support for B8BRE1 as seed ortholog is 80%.

Group of orthologs #1263. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.pseudonana:80

Q74Z75              	100.00%		B8C9I3              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for B8C9I3 as seed ortholog is 100%.

Group of orthologs #1264. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:34 T.pseudonana:79

Q75D69              	100.00%		B8BT25              	100.00%
Q74Z78              	20.26%		B8BWW5              	61.28%
Q75A39              	6.22%		
Bootstrap support for Q75D69 as seed ortholog is 75%.
Bootstrap support for B8BT25 as seed ortholog is 100%.

Group of orthologs #1265. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q752I3              	100.00%		B8C9C6              	100.00%
                    	       		B8BXZ5              	38.15%
Bootstrap support for Q752I3 as seed ortholog is 100%.
Bootstrap support for B8C9C6 as seed ortholog is 100%.

Group of orthologs #1266. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q75A93              	100.00%		B8CE39              	100.00%
                    	       		B8C807              	12.38%
Bootstrap support for Q75A93 as seed ortholog is 100%.
Bootstrap support for B8CE39 as seed ortholog is 100%.

Group of orthologs #1267. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q753F1              	100.00%		B5YMB0              	100.00%
Bootstrap support for Q753F1 as seed ortholog is 100%.
Bootstrap support for B5YMB0 as seed ortholog is 100%.

Group of orthologs #1268. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q75BJ4              	100.00%		B5YLK3              	100.00%
Bootstrap support for Q75BJ4 as seed ortholog is 100%.
Bootstrap support for B5YLK3 as seed ortholog is 100%.

Group of orthologs #1269. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:3

Q75DY2              	100.00%		B8C262              	100.00%
Bootstrap support for Q75DY2 as seed ortholog is 100%.
Bootstrap support for B8C262 as seed ortholog is 51%.
Alternative seed ortholog is B8C967 (3 bits away from this cluster)

Group of orthologs #1270. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q75BW2              	100.00%		B8CEJ2              	100.00%
Bootstrap support for Q75BW2 as seed ortholog is 100%.
Bootstrap support for B8CEJ2 as seed ortholog is 100%.

Group of orthologs #1271. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q75D11              	100.00%		B8CDI6              	100.00%
Bootstrap support for Q75D11 as seed ortholog is 100%.
Bootstrap support for B8CDI6 as seed ortholog is 100%.

Group of orthologs #1272. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.pseudonana:79

Q75C29              	100.00%		B8CF99              	100.00%
Bootstrap support for Q75C29 as seed ortholog is 100%.
Bootstrap support for B8CF99 as seed ortholog is 100%.

Group of orthologs #1273. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.pseudonana:78

Q758D8              	100.00%		B8BVE4              	100.00%
Bootstrap support for Q758D8 as seed ortholog is 100%.
Bootstrap support for B8BVE4 as seed ortholog is 100%.

Group of orthologs #1274. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.pseudonana:78

Q752Q9              	100.00%		B8C2N4              	100.00%
Bootstrap support for Q752Q9 as seed ortholog is 100%.
Bootstrap support for B8C2N4 as seed ortholog is 100%.

Group of orthologs #1275. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.pseudonana:78

Q753A0              	100.00%		B8C3C8              	100.00%
Bootstrap support for Q753A0 as seed ortholog is 100%.
Bootstrap support for B8C3C8 as seed ortholog is 100%.

Group of orthologs #1276. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:17 T.pseudonana:78

Q759D2              	100.00%		B8C3S0              	100.00%
Bootstrap support for Q759D2 as seed ortholog is 80%.
Bootstrap support for B8C3S0 as seed ortholog is 100%.

Group of orthologs #1277. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q752J8              	100.00%		B8BTE9              	100.00%
Bootstrap support for Q752J8 as seed ortholog is 100%.
Bootstrap support for B8BTE9 as seed ortholog is 100%.

Group of orthologs #1278. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q75B76              	100.00%		A0T0Y0              	100.00%
Bootstrap support for Q75B76 as seed ortholog is 100%.
Bootstrap support for A0T0Y0 as seed ortholog is 100%.

Group of orthologs #1279. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q75A02              	100.00%		B8BSU0              	100.00%
Bootstrap support for Q75A02 as seed ortholog is 100%.
Bootstrap support for B8BSU0 as seed ortholog is 100%.

Group of orthologs #1280. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q755I6              	100.00%		B8BZT3              	100.00%
Bootstrap support for Q755I6 as seed ortholog is 100%.
Bootstrap support for B8BZT3 as seed ortholog is 100%.

Group of orthologs #1281. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q75C77              	100.00%		B8BZJ1              	100.00%
Bootstrap support for Q75C77 as seed ortholog is 100%.
Bootstrap support for B8BZJ1 as seed ortholog is 100%.

Group of orthologs #1282. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q75AU6              	100.00%		B8C2T4              	100.00%
Bootstrap support for Q75AU6 as seed ortholog is 100%.
Bootstrap support for B8C2T4 as seed ortholog is 100%.

Group of orthologs #1283. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q756Y9              	100.00%		B8CE48              	100.00%
Bootstrap support for Q756Y9 as seed ortholog is 100%.
Bootstrap support for B8CE48 as seed ortholog is 100%.

Group of orthologs #1284. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q75A53              	100.00%		B8CDD2              	100.00%
Bootstrap support for Q75A53 as seed ortholog is 100%.
Bootstrap support for B8CDD2 as seed ortholog is 100%.

Group of orthologs #1285. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.pseudonana:77

Q75E92              	100.00%		B8LCN0              	100.00%
Bootstrap support for Q75E92 as seed ortholog is 100%.
Bootstrap support for B8LCN0 as seed ortholog is 100%.

Group of orthologs #1286. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q75D28              	100.00%		B8BS62              	100.00%
Q75BX2              	15.24%		
Bootstrap support for Q75D28 as seed ortholog is 100%.
Bootstrap support for B8BS62 as seed ortholog is 100%.

Group of orthologs #1287. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q754P9              	100.00%		B5YLP7              	100.00%
Bootstrap support for Q754P9 as seed ortholog is 100%.
Bootstrap support for B5YLP7 as seed ortholog is 100%.

Group of orthologs #1288. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q75AV0              	100.00%		B8BQH6              	100.00%
Bootstrap support for Q75AV0 as seed ortholog is 100%.
Bootstrap support for B8BQH6 as seed ortholog is 100%.

Group of orthologs #1289. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q75E69              	100.00%		B5YLU8              	100.00%
Bootstrap support for Q75E69 as seed ortholog is 100%.
Bootstrap support for B5YLU8 as seed ortholog is 100%.

Group of orthologs #1290. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q750X5              	100.00%		B8C2K1              	100.00%
Bootstrap support for Q750X5 as seed ortholog is 100%.
Bootstrap support for B8C2K1 as seed ortholog is 100%.

Group of orthologs #1291. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q75BE9              	100.00%		B8C3G7              	100.00%
Bootstrap support for Q75BE9 as seed ortholog is 100%.
Bootstrap support for B8C3G7 as seed ortholog is 100%.

Group of orthologs #1292. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q75DI1              	100.00%		B8C5T6              	100.00%
Bootstrap support for Q75DI1 as seed ortholog is 100%.
Bootstrap support for B8C5T6 as seed ortholog is 100%.

Group of orthologs #1293. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.pseudonana:76

Q75A47              	100.00%		B8CG12              	100.00%
Bootstrap support for Q75A47 as seed ortholog is 100%.
Bootstrap support for B8CG12 as seed ortholog is 100%.

Group of orthologs #1294. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.pseudonana:75

Q75BZ3              	100.00%		B8BPY1              	100.00%
Bootstrap support for Q75BZ3 as seed ortholog is 100%.
Bootstrap support for B8BPY1 as seed ortholog is 100%.

Group of orthologs #1295. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.pseudonana:75

Q74ZU8              	100.00%		B8BZ56              	100.00%
Bootstrap support for Q74ZU8 as seed ortholog is 100%.
Bootstrap support for B8BZ56 as seed ortholog is 100%.

Group of orthologs #1296. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.pseudonana:75

Q756P9              	100.00%		B8C4S7              	100.00%
Bootstrap support for Q756P9 as seed ortholog is 100%.
Bootstrap support for B8C4S7 as seed ortholog is 100%.

Group of orthologs #1297. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q757S0              	100.00%		B8CGK2              	100.00%
                    	       		B8CGK4              	100.00%
Bootstrap support for Q757S0 as seed ortholog is 100%.
Bootstrap support for B8CGK2 as seed ortholog is 100%.
Bootstrap support for B8CGK4 as seed ortholog is 100%.

Group of orthologs #1298. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q74Z19              	100.00%		B8BXT4              	100.00%
Bootstrap support for Q74Z19 as seed ortholog is 100%.
Bootstrap support for B8BXT4 as seed ortholog is 100%.

Group of orthologs #1299. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q759N5              	100.00%		B8BSI6              	100.00%
Bootstrap support for Q759N5 as seed ortholog is 100%.
Bootstrap support for B8BSI6 as seed ortholog is 100%.

Group of orthologs #1300. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q752Z3              	100.00%		B8C2V0              	100.00%
Bootstrap support for Q752Z3 as seed ortholog is 100%.
Bootstrap support for B8C2V0 as seed ortholog is 100%.

Group of orthologs #1301. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q75F19              	100.00%		B8BTR5              	100.00%
Bootstrap support for Q75F19 as seed ortholog is 100%.
Bootstrap support for B8BTR5 as seed ortholog is 100%.

Group of orthologs #1302. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q75BB5              	100.00%		B8C3R5              	100.00%
Bootstrap support for Q75BB5 as seed ortholog is 100%.
Bootstrap support for B8C3R5 as seed ortholog is 100%.

Group of orthologs #1303. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q755Q7              	100.00%		B8C8G2              	100.00%
Bootstrap support for Q755Q7 as seed ortholog is 100%.
Bootstrap support for B8C8G2 as seed ortholog is 100%.

Group of orthologs #1304. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:24 T.pseudonana:32

Q75DE1              	100.00%		B8C3G1              	100.00%
Bootstrap support for Q75DE1 as seed ortholog is 80%.
Bootstrap support for B8C3G1 as seed ortholog is 86%.

Group of orthologs #1305. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.pseudonana:74

Q755Q3              	100.00%		B8CCD5              	100.00%
Bootstrap support for Q755Q3 as seed ortholog is 100%.
Bootstrap support for B8CCD5 as seed ortholog is 100%.

Group of orthologs #1306. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.pseudonana:73

Q754A8              	100.00%		B8CA55              	100.00%
                    	       		B8C932              	35.82%
                    	       		B8CDK0              	33.69%
                    	       		B8CGL4              	32.62%
Bootstrap support for Q754A8 as seed ortholog is 100%.
Bootstrap support for B8CA55 as seed ortholog is 100%.

Group of orthologs #1307. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:26 T.pseudonana:6

Q755Z4              	100.00%		B8BRK3              	100.00%
                    	       		B5YNT5              	6.56%
                    	       		B8BTK3              	6.56%
                    	       		B8BYY5              	6.13%
Bootstrap support for Q755Z4 as seed ortholog is 77%.
Bootstrap support for B8BRK3 as seed ortholog is 55%.
Alternative seed ortholog is B8BU45 (6 bits away from this cluster)

Group of orthologs #1308. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.pseudonana:1

Q754D4              	100.00%		B8C083              	100.00%
                    	       		B8CBQ1              	24.69%
                    	       		B8CBT6              	6.46%
                    	       		B8BV59              	6.12%
Bootstrap support for Q754D4 as seed ortholog is 100%.
Bootstrap support for B8C083 as seed ortholog is 57%.
Alternative seed ortholog is B5YMW5 (1 bits away from this cluster)

Group of orthologs #1309. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.pseudonana:1

Q754T6              	100.00%		B8BU70              	100.00%
Bootstrap support for Q754T6 as seed ortholog is 100%.
Bootstrap support for B8BU70 as seed ortholog is 49%.
Alternative seed ortholog is B8C302 (1 bits away from this cluster)

Group of orthologs #1310. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.pseudonana:72

Q753H3              	100.00%		B8C3I3              	100.00%
Bootstrap support for Q753H3 as seed ortholog is 100%.
Bootstrap support for B8C3I3 as seed ortholog is 100%.

Group of orthologs #1311. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.pseudonana:72

Q75CH0              	100.00%		B8BYV6              	100.00%
Bootstrap support for Q75CH0 as seed ortholog is 100%.
Bootstrap support for B8BYV6 as seed ortholog is 100%.

Group of orthologs #1312. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q758Y3              	100.00%		B8CDS3              	100.00%
                    	       		B5YN05              	24.20%
                    	       		B8BX07              	23.73%
                    	       		B8C496              	19.27%
                    	       		B8BQP3              	8.76%
Bootstrap support for Q758Y3 as seed ortholog is 100%.
Bootstrap support for B8CDS3 as seed ortholog is 100%.

Group of orthologs #1313. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:4

Q751P0              	100.00%		B8BW76              	100.00%
Bootstrap support for Q751P0 as seed ortholog is 100%.
Bootstrap support for B8BW76 as seed ortholog is 82%.

Group of orthologs #1314. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:15

Q750S3              	100.00%		B8BXW5              	100.00%
Bootstrap support for Q750S3 as seed ortholog is 100%.
Bootstrap support for B8BXW5 as seed ortholog is 60%.
Alternative seed ortholog is B8LC17 (15 bits away from this cluster)

Group of orthologs #1315. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q75DM1              	100.00%		B5YNJ6              	100.00%
Bootstrap support for Q75DM1 as seed ortholog is 100%.
Bootstrap support for B5YNJ6 as seed ortholog is 100%.

Group of orthologs #1316. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q75BY0              	100.00%		B8BSU8              	100.00%
Bootstrap support for Q75BY0 as seed ortholog is 100%.
Bootstrap support for B8BSU8 as seed ortholog is 100%.

Group of orthologs #1317. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q754L8              	100.00%		B8BZJ9              	100.00%
Bootstrap support for Q754L8 as seed ortholog is 100%.
Bootstrap support for B8BZJ9 as seed ortholog is 100%.

Group of orthologs #1318. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q752S0              	100.00%		B8C7C3              	100.00%
Bootstrap support for Q752S0 as seed ortholog is 100%.
Bootstrap support for B8C7C3 as seed ortholog is 100%.

Group of orthologs #1319. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q754J4              	100.00%		B8CBG5              	100.00%
Bootstrap support for Q754J4 as seed ortholog is 100%.
Bootstrap support for B8CBG5 as seed ortholog is 100%.

Group of orthologs #1320. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q75AS4              	100.00%		B8C6V9              	100.00%
Bootstrap support for Q75AS4 as seed ortholog is 100%.
Bootstrap support for B8C6V9 as seed ortholog is 100%.

Group of orthologs #1321. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q75EE3              	100.00%		B8C6P7              	100.00%
Bootstrap support for Q75EE3 as seed ortholog is 100%.
Bootstrap support for B8C6P7 as seed ortholog is 100%.

Group of orthologs #1322. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.pseudonana:71

Q75CA1              	100.00%		B8CCP7              	100.00%
Bootstrap support for Q75CA1 as seed ortholog is 100%.
Bootstrap support for B8CCP7 as seed ortholog is 100%.

Group of orthologs #1323. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.pseudonana:70

Q754N3              	100.00%		B5YND4              	100.00%
Bootstrap support for Q754N3 as seed ortholog is 100%.
Bootstrap support for B5YND4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.pseudonana:70

Q75BV5              	100.00%		B8C2L6              	100.00%
Bootstrap support for Q75BV5 as seed ortholog is 100%.
Bootstrap support for B8C2L6 as seed ortholog is 100%.

Group of orthologs #1325. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.pseudonana:70

Q75CU9              	100.00%		B8C3A8              	100.00%
Bootstrap support for Q75CU9 as seed ortholog is 100%.
Bootstrap support for B8C3A8 as seed ortholog is 100%.

Group of orthologs #1326. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q751X8              	100.00%		B8CFM3              	100.00%
                    	       		B8BZG8              	46.75%
Bootstrap support for Q751X8 as seed ortholog is 100%.
Bootstrap support for B8CFM3 as seed ortholog is 100%.

Group of orthologs #1327. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q74ZL6              	100.00%		B8BVF1              	100.00%
Bootstrap support for Q74ZL6 as seed ortholog is 100%.
Bootstrap support for B8BVF1 as seed ortholog is 100%.

Group of orthologs #1328. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q753I0              	100.00%		B8BYC5              	100.00%
Bootstrap support for Q753I0 as seed ortholog is 100%.
Bootstrap support for B8BYC5 as seed ortholog is 100%.

Group of orthologs #1329. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:22

Q75BF2              	100.00%		B8BSD2              	100.00%
Bootstrap support for Q75BF2 as seed ortholog is 100%.
Bootstrap support for B8BSD2 as seed ortholog is 90%.

Group of orthologs #1330. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q75C41              	100.00%		B8BYE8              	100.00%
Bootstrap support for Q75C41 as seed ortholog is 100%.
Bootstrap support for B8BYE8 as seed ortholog is 100%.

Group of orthologs #1331. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q759T8              	100.00%		B8C1B6              	100.00%
Bootstrap support for Q759T8 as seed ortholog is 100%.
Bootstrap support for B8C1B6 as seed ortholog is 100%.

Group of orthologs #1332. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q75CT6              	100.00%		B8C076              	100.00%
Bootstrap support for Q75CT6 as seed ortholog is 100%.
Bootstrap support for B8C076 as seed ortholog is 100%.

Group of orthologs #1333. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q758M9              	100.00%		B8C4J9              	100.00%
Bootstrap support for Q758M9 as seed ortholog is 100%.
Bootstrap support for B8C4J9 as seed ortholog is 100%.

Group of orthologs #1334. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:20 T.pseudonana:69

D8FGG0              	100.00%		B8CF25              	100.00%
Bootstrap support for D8FGG0 as seed ortholog is 79%.
Bootstrap support for B8CF25 as seed ortholog is 100%.

Group of orthologs #1335. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q750Y3              	100.00%		B8CDZ1              	100.00%
Bootstrap support for Q750Y3 as seed ortholog is 100%.
Bootstrap support for B8CDZ1 as seed ortholog is 100%.

Group of orthologs #1336. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.pseudonana:69

Q75E51              	100.00%		B8CD52              	100.00%
Bootstrap support for Q75E51 as seed ortholog is 100%.
Bootstrap support for B8CD52 as seed ortholog is 100%.

Group of orthologs #1337. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.pseudonana:68

Q750A3              	100.00%		B5YLP4              	100.00%
Bootstrap support for Q750A3 as seed ortholog is 100%.
Bootstrap support for B5YLP4 as seed ortholog is 100%.

Group of orthologs #1338. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.pseudonana:68

Q755M6              	100.00%		B5YN43              	100.00%
Bootstrap support for Q755M6 as seed ortholog is 100%.
Bootstrap support for B5YN43 as seed ortholog is 100%.

Group of orthologs #1339. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.pseudonana:68

Q753A7              	100.00%		B8BVN7              	100.00%
Bootstrap support for Q753A7 as seed ortholog is 100%.
Bootstrap support for B8BVN7 as seed ortholog is 100%.

Group of orthologs #1340. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q759N8              	100.00%		B8BQ32              	100.00%
Q755C3              	8.18%		
Bootstrap support for Q759N8 as seed ortholog is 100%.
Bootstrap support for B8BQ32 as seed ortholog is 100%.

Group of orthologs #1341. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q755R7              	100.00%		B5YPA1              	100.00%
Bootstrap support for Q755R7 as seed ortholog is 100%.
Bootstrap support for B5YPA1 as seed ortholog is 100%.

Group of orthologs #1342. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q75BB9              	100.00%		B5YMG1              	100.00%
Bootstrap support for Q75BB9 as seed ortholog is 100%.
Bootstrap support for B5YMG1 as seed ortholog is 100%.

Group of orthologs #1343. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:3

Q752F5              	100.00%		B8C4W3              	100.00%
Bootstrap support for Q752F5 as seed ortholog is 100%.
Bootstrap support for B8C4W3 as seed ortholog is 50%.
Alternative seed ortholog is B8CA51 (3 bits away from this cluster)

Group of orthologs #1344. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q75CC7              	100.00%		B8BXN1              	100.00%
Bootstrap support for Q75CC7 as seed ortholog is 100%.
Bootstrap support for B8BXN1 as seed ortholog is 100%.

Group of orthologs #1345. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q753K7              	100.00%		B8C5U3              	100.00%
Bootstrap support for Q753K7 as seed ortholog is 100%.
Bootstrap support for B8C5U3 as seed ortholog is 100%.

Group of orthologs #1346. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q74ZG5              	100.00%		B8CBR5              	100.00%
Bootstrap support for Q74ZG5 as seed ortholog is 100%.
Bootstrap support for B8CBR5 as seed ortholog is 100%.

Group of orthologs #1347. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q75B93              	100.00%		B8C8A6              	100.00%
Bootstrap support for Q75B93 as seed ortholog is 100%.
Bootstrap support for B8C8A6 as seed ortholog is 100%.

Group of orthologs #1348. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.pseudonana:67

Q75EF4              	100.00%		B8C696              	100.00%
Bootstrap support for Q75EF4 as seed ortholog is 100%.
Bootstrap support for B8C696 as seed ortholog is 100%.

Group of orthologs #1349. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q752N1              	100.00%		B8BVI8              	100.00%
                    	       		B8C0I2              	27.43%
                    	       		B5YLS2              	23.44%
                    	       		B8BUP7              	17.58%
                    	       		B8C698              	15.45%
                    	       		B8LE41              	13.98%
                    	       		B8LE40              	13.05%
                    	       		B8C697              	8.39%
                    	       		B8BSB3              	5.86%
Bootstrap support for Q752N1 as seed ortholog is 100%.
Bootstrap support for B8BVI8 as seed ortholog is 100%.

Group of orthologs #1350. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q751M2              	100.00%		B8C183              	100.00%
Q757Z2              	22.04%		
Q751M3              	15.39%		
Bootstrap support for Q751M2 as seed ortholog is 100%.
Bootstrap support for B8C183 as seed ortholog is 100%.

Group of orthologs #1351. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q755X8              	100.00%		B8BQH9              	100.00%
Bootstrap support for Q755X8 as seed ortholog is 100%.
Bootstrap support for B8BQH9 as seed ortholog is 100%.

Group of orthologs #1352. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q752S2              	100.00%		B8BTA6              	100.00%
Bootstrap support for Q752S2 as seed ortholog is 100%.
Bootstrap support for B8BTA6 as seed ortholog is 100%.

Group of orthologs #1353. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:11 T.pseudonana:66

Q754K6              	100.00%		B8BUP6              	100.00%
Bootstrap support for Q754K6 as seed ortholog is 62%.
Alternative seed ortholog is Q75DQ0 (11 bits away from this cluster)
Bootstrap support for B8BUP6 as seed ortholog is 100%.

Group of orthologs #1354. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q755T6              	100.00%		B8BW36              	100.00%
Bootstrap support for Q755T6 as seed ortholog is 100%.
Bootstrap support for B8BW36 as seed ortholog is 100%.

Group of orthologs #1355. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q756E9              	100.00%		B8BX09              	100.00%
Bootstrap support for Q756E9 as seed ortholog is 100%.
Bootstrap support for B8BX09 as seed ortholog is 100%.

Group of orthologs #1356. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q75BA0              	100.00%		B8BT66              	100.00%
Bootstrap support for Q75BA0 as seed ortholog is 100%.
Bootstrap support for B8BT66 as seed ortholog is 100%.

Group of orthologs #1357. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:21

Q758B6              	100.00%		B8BWC8              	100.00%
Bootstrap support for Q758B6 as seed ortholog is 100%.
Bootstrap support for B8BWC8 as seed ortholog is 69%.
Alternative seed ortholog is B8BU45 (21 bits away from this cluster)

Group of orthologs #1358. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q754Z9              	100.00%		B8BZL1              	100.00%
Bootstrap support for Q754Z9 as seed ortholog is 100%.
Bootstrap support for B8BZL1 as seed ortholog is 100%.

Group of orthologs #1359. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q75CN1              	100.00%		B8CEC9              	100.00%
Bootstrap support for Q75CN1 as seed ortholog is 100%.
Bootstrap support for B8CEC9 as seed ortholog is 100%.

Group of orthologs #1360. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q758S3              	100.00%		B8LDZ0              	100.00%
Bootstrap support for Q758S3 as seed ortholog is 100%.
Bootstrap support for B8LDZ0 as seed ortholog is 100%.

Group of orthologs #1361. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.pseudonana:66

Q75CH5              	100.00%		B8LDL4              	100.00%
Bootstrap support for Q75CH5 as seed ortholog is 100%.
Bootstrap support for B8LDL4 as seed ortholog is 100%.

Group of orthologs #1362. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.pseudonana:65

Q75B33              	100.00%		B8BV90              	100.00%
Bootstrap support for Q75B33 as seed ortholog is 100%.
Bootstrap support for B8BV90 as seed ortholog is 100%.

Group of orthologs #1363. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.pseudonana:65

Q75AY8              	100.00%		B8BXD3              	100.00%
Bootstrap support for Q75AY8 as seed ortholog is 100%.
Bootstrap support for B8BXD3 as seed ortholog is 100%.

Group of orthologs #1364. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.pseudonana:16

Q751I2              	100.00%		B8CD64              	100.00%
Bootstrap support for Q751I2 as seed ortholog is 100%.
Bootstrap support for B8CD64 as seed ortholog is 61%.
Alternative seed ortholog is B8C448 (16 bits away from this cluster)

Group of orthologs #1365. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q752L9              	100.00%		B8BR21              	100.00%
Q752L8              	100.00%		B8BR20              	100.00%
Bootstrap support for Q752L9 as seed ortholog is 100%.
Bootstrap support for Q752L8 as seed ortholog is 100%.
Bootstrap support for B8BR21 as seed ortholog is 100%.
Bootstrap support for B8BR20 as seed ortholog is 100%.

Group of orthologs #1366. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:7 T.pseudonana:64

Q75EP6              	100.00%		B8CCF3              	100.00%
                    	       		B8BTV2              	26.12%
                    	       		B8BQV5              	8.05%
Bootstrap support for Q75EP6 as seed ortholog is 56%.
Alternative seed ortholog is Q755W7 (7 bits away from this cluster)
Bootstrap support for B8CCF3 as seed ortholog is 100%.

Group of orthologs #1367. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q74Z43              	100.00%		B8BUE5              	100.00%
                    	       		B8C6M9              	100.00%
Bootstrap support for Q74Z43 as seed ortholog is 100%.
Bootstrap support for B8BUE5 as seed ortholog is 100%.
Bootstrap support for B8C6M9 as seed ortholog is 100%.

Group of orthologs #1368. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q750U6              	100.00%		B5YN26              	100.00%
Bootstrap support for Q750U6 as seed ortholog is 100%.
Bootstrap support for B5YN26 as seed ortholog is 100%.

Group of orthologs #1369. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q758A0              	100.00%		B8BZ98              	100.00%
Bootstrap support for Q758A0 as seed ortholog is 100%.
Bootstrap support for B8BZ98 as seed ortholog is 100%.

Group of orthologs #1370. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q758H2              	100.00%		B8BZL2              	100.00%
Bootstrap support for Q758H2 as seed ortholog is 100%.
Bootstrap support for B8BZL2 as seed ortholog is 100%.

Group of orthologs #1371. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q75BK6              	100.00%		B8BY05              	100.00%
Bootstrap support for Q75BK6 as seed ortholog is 100%.
Bootstrap support for B8BY05 as seed ortholog is 100%.

Group of orthologs #1372. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q757G1              	100.00%		B8CC59              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for B8CC59 as seed ortholog is 100%.

Group of orthologs #1373. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.pseudonana:64

Q75D24              	100.00%		B8CBC8              	100.00%
Bootstrap support for Q75D24 as seed ortholog is 100%.
Bootstrap support for B8CBC8 as seed ortholog is 100%.

Group of orthologs #1374. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.pseudonana:63

Q74ZP1              	100.00%		B5YLP6              	100.00%
Bootstrap support for Q74ZP1 as seed ortholog is 100%.
Bootstrap support for B5YLP6 as seed ortholog is 100%.

Group of orthologs #1375. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:16 T.pseudonana:63

Q75CP9              	100.00%		B8BTL3              	100.00%
Bootstrap support for Q75CP9 as seed ortholog is 71%.
Alternative seed ortholog is Q75EV3 (16 bits away from this cluster)
Bootstrap support for B8BTL3 as seed ortholog is 100%.

Group of orthologs #1376. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.pseudonana:63

Q75BR7              	100.00%		B8C1P5              	100.00%
Bootstrap support for Q75BR7 as seed ortholog is 100%.
Bootstrap support for B8C1P5 as seed ortholog is 100%.

Group of orthologs #1377. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q750F0              	100.00%		B8BQ92              	100.00%
Bootstrap support for Q750F0 as seed ortholog is 100%.
Bootstrap support for B8BQ92 as seed ortholog is 100%.

Group of orthologs #1378. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q75AG5              	100.00%		B8BVP3              	100.00%
Bootstrap support for Q75AG5 as seed ortholog is 100%.
Bootstrap support for B8BVP3 as seed ortholog is 100%.

Group of orthologs #1379. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q753S7              	100.00%		B8C1D2              	100.00%
Bootstrap support for Q753S7 as seed ortholog is 100%.
Bootstrap support for B8C1D2 as seed ortholog is 100%.

Group of orthologs #1380. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q750D9              	100.00%		B8C6L9              	100.00%
Bootstrap support for Q750D9 as seed ortholog is 100%.
Bootstrap support for B8C6L9 as seed ortholog is 100%.

Group of orthologs #1381. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q758R7              	100.00%		B8C175              	100.00%
Bootstrap support for Q758R7 as seed ortholog is 100%.
Bootstrap support for B8C175 as seed ortholog is 100%.

Group of orthologs #1382. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q75BB8              	100.00%		B8C454              	100.00%
Bootstrap support for Q75BB8 as seed ortholog is 100%.
Bootstrap support for B8C454 as seed ortholog is 100%.

Group of orthologs #1383. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q75EI7              	100.00%		B8C1M3              	100.00%
Bootstrap support for Q75EI7 as seed ortholog is 100%.
Bootstrap support for B8C1M3 as seed ortholog is 100%.

Group of orthologs #1384. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q74ZG0              	100.00%		B8CE04              	100.00%
Bootstrap support for Q74ZG0 as seed ortholog is 100%.
Bootstrap support for B8CE04 as seed ortholog is 100%.

Group of orthologs #1385. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.pseudonana:62

Q75CV2              	100.00%		B8CEE4              	100.00%
Bootstrap support for Q75CV2 as seed ortholog is 100%.
Bootstrap support for B8CEE4 as seed ortholog is 100%.

Group of orthologs #1386. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.pseudonana:61

Q74ZJ1              	100.00%		B8BUA2              	100.00%
Bootstrap support for Q74ZJ1 as seed ortholog is 100%.
Bootstrap support for B8BUA2 as seed ortholog is 100%.

Group of orthologs #1387. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.pseudonana:61

Q751F9              	100.00%		B8C3Y9              	100.00%
Bootstrap support for Q751F9 as seed ortholog is 100%.
Bootstrap support for B8C3Y9 as seed ortholog is 100%.

Group of orthologs #1388. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.pseudonana:61

Q756Z4              	100.00%		B8CC26              	100.00%
Bootstrap support for Q756Z4 as seed ortholog is 100%.
Bootstrap support for B8CC26 as seed ortholog is 100%.

Group of orthologs #1389. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.pseudonana:61

Q75DP4              	100.00%		B8LCL2              	100.00%
Bootstrap support for Q75DP4 as seed ortholog is 100%.
Bootstrap support for B8LCL2 as seed ortholog is 100%.

Group of orthologs #1390. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.pseudonana:60

Q75FA9              	100.00%		B5YN94              	100.00%
                    	       		B5YN96              	68.87%
                    	       		B5YNA3              	42.77%
                    	       		B8LEA2              	18.55%
                    	       		B8CEU8              	15.72%
                    	       		B8LEA3              	10.69%
Bootstrap support for Q75FA9 as seed ortholog is 100%.
Bootstrap support for B5YN94 as seed ortholog is 100%.

Group of orthologs #1391. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.pseudonana:60

Q75CL0              	100.00%		B5YN38              	100.00%
Bootstrap support for Q75CL0 as seed ortholog is 100%.
Bootstrap support for B5YN38 as seed ortholog is 100%.

Group of orthologs #1392. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.pseudonana:60

Q75G39              	100.00%		A0T0N9              	100.00%
Bootstrap support for Q75G39 as seed ortholog is 100%.
Bootstrap support for A0T0N9 as seed ortholog is 100%.

Group of orthologs #1393. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.pseudonana:60

Q756I7              	100.00%		B8C3J0              	100.00%
Bootstrap support for Q756I7 as seed ortholog is 100%.
Bootstrap support for B8C3J0 as seed ortholog is 100%.

Group of orthologs #1394. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:59

Q758I7              	100.00%		B8C6J3              	100.00%
                    	       		B5YNB2              	9.02%
                    	       		B8CFI5              	5.38%
Bootstrap support for Q758I7 as seed ortholog is 100%.
Bootstrap support for B8C6J3 as seed ortholog is 100%.

Group of orthologs #1395. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:59

Q752C9              	100.00%		B8BQJ7              	100.00%
Bootstrap support for Q752C9 as seed ortholog is 100%.
Bootstrap support for B8BQJ7 as seed ortholog is 100%.

Group of orthologs #1396. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:59

Q75EU1              	100.00%		B5YNX5              	100.00%
Bootstrap support for Q75EU1 as seed ortholog is 100%.
Bootstrap support for B5YNX5 as seed ortholog is 100%.

Group of orthologs #1397. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:59

Q758G8              	100.00%		B8C3Q8              	100.00%
Bootstrap support for Q758G8 as seed ortholog is 100%.
Bootstrap support for B8C3Q8 as seed ortholog is 100%.

Group of orthologs #1398. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:59

Q75E64              	100.00%		B8BZ84              	100.00%
Bootstrap support for Q75E64 as seed ortholog is 100%.
Bootstrap support for B8BZ84 as seed ortholog is 100%.

Group of orthologs #1399. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.pseudonana:3

Q75F52              	100.00%		B8C5B2              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 100%.
Bootstrap support for B8C5B2 as seed ortholog is 51%.
Alternative seed ortholog is B8LBV1 (3 bits away from this cluster)

Group of orthologs #1400. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:5 T.pseudonana:59

Q756V7              	100.00%		B8CDQ5              	100.00%
Bootstrap support for Q756V7 as seed ortholog is 59%.
Alternative seed ortholog is Q75F34 (5 bits away from this cluster)
Bootstrap support for B8CDQ5 as seed ortholog is 100%.

Group of orthologs #1401. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:16 T.pseudonana:59

Q759W7              	100.00%		B8CEA7              	100.00%
Bootstrap support for Q759W7 as seed ortholog is 86%.
Bootstrap support for B8CEA7 as seed ortholog is 100%.

Group of orthologs #1402. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.pseudonana:58

Q759H3              	100.00%		B8BQW8              	100.00%
Bootstrap support for Q759H3 as seed ortholog is 100%.
Bootstrap support for B8BQW8 as seed ortholog is 100%.

Group of orthologs #1403. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.pseudonana:58

Q75A35              	100.00%		B8BQV7              	100.00%
Bootstrap support for Q75A35 as seed ortholog is 100%.
Bootstrap support for B8BQV7 as seed ortholog is 100%.

Group of orthologs #1404. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.pseudonana:9

Q758Y1              	100.00%		B8LBL3              	100.00%
Bootstrap support for Q758Y1 as seed ortholog is 100%.
Bootstrap support for B8LBL3 as seed ortholog is 66%.
Alternative seed ortholog is B8BZM5 (9 bits away from this cluster)

Group of orthologs #1405. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q751D0              	100.00%		A0T0X6              	100.00%
Bootstrap support for Q751D0 as seed ortholog is 100%.
Bootstrap support for A0T0X6 as seed ortholog is 100%.

Group of orthologs #1406. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q751V8              	100.00%		B5YNC9              	100.00%
Bootstrap support for Q751V8 as seed ortholog is 100%.
Bootstrap support for B5YNC9 as seed ortholog is 100%.

Group of orthologs #1407. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q750N0              	100.00%		B8BUE9              	100.00%
Bootstrap support for Q750N0 as seed ortholog is 100%.
Bootstrap support for B8BUE9 as seed ortholog is 100%.

Group of orthologs #1408. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:8

Q75CK7              	100.00%		B8BRD6              	100.00%
Bootstrap support for Q75CK7 as seed ortholog is 100%.
Bootstrap support for B8BRD6 as seed ortholog is 59%.
Alternative seed ortholog is B8BVM4 (8 bits away from this cluster)

Group of orthologs #1409. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q750G9              	100.00%		B8C5G1              	100.00%
Bootstrap support for Q750G9 as seed ortholog is 100%.
Bootstrap support for B8C5G1 as seed ortholog is 100%.

Group of orthologs #1410. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q752W4              	100.00%		B8C4L0              	100.00%
Bootstrap support for Q752W4 as seed ortholog is 100%.
Bootstrap support for B8C4L0 as seed ortholog is 100%.

Group of orthologs #1411. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q75AP5              	100.00%		B8CE22              	100.00%
Bootstrap support for Q75AP5 as seed ortholog is 100%.
Bootstrap support for B8CE22 as seed ortholog is 100%.

Group of orthologs #1412. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.pseudonana:57

Q75E91              	100.00%		B8CFF4              	100.00%
Bootstrap support for Q75E91 as seed ortholog is 100%.
Bootstrap support for B8CFF4 as seed ortholog is 100%.

Group of orthologs #1413. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:56

Q75DT7              	100.00%		B8C6A3              	100.00%
                    	       		B8C7I1              	33.28%
                    	       		B8LE45              	22.09%
                    	       		B8C6A2              	11.66%
Bootstrap support for Q75DT7 as seed ortholog is 100%.
Bootstrap support for B8C6A3 as seed ortholog is 100%.

Group of orthologs #1414. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:56

Q754B3              	100.00%		B8BVT6              	100.00%
                    	       		B8BR19              	20.38%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for B8BVT6 as seed ortholog is 100%.

Group of orthologs #1415. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:56

Q756N9              	100.00%		B8BZJ2              	100.00%
Bootstrap support for Q756N9 as seed ortholog is 100%.
Bootstrap support for B8BZJ2 as seed ortholog is 100%.

Group of orthologs #1416. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:56

Q75CV4              	100.00%		B8BWM6              	100.00%
Bootstrap support for Q75CV4 as seed ortholog is 100%.
Bootstrap support for B8BWM6 as seed ortholog is 100%.

Group of orthologs #1417. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.pseudonana:5

Q75BG7              	100.00%		B8C694              	100.00%
Bootstrap support for Q75BG7 as seed ortholog is 100%.
Bootstrap support for B8C694 as seed ortholog is 55%.
Alternative seed ortholog is B8BQT0 (5 bits away from this cluster)

Group of orthologs #1418. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.pseudonana:55

Q758S0              	100.00%		B8BU99              	100.00%
Bootstrap support for Q758S0 as seed ortholog is 100%.
Bootstrap support for B8BU99 as seed ortholog is 100%.

Group of orthologs #1419. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.pseudonana:55

Q75BZ7              	100.00%		B8BTR6              	100.00%
Bootstrap support for Q75BZ7 as seed ortholog is 100%.
Bootstrap support for B8BTR6 as seed ortholog is 100%.

Group of orthologs #1420. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.pseudonana:55

Q75DK6              	100.00%		B8BWA8              	100.00%
Bootstrap support for Q75DK6 as seed ortholog is 100%.
Bootstrap support for B8BWA8 as seed ortholog is 100%.

Group of orthologs #1421. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.pseudonana:55

Q752X2              	100.00%		B8CDU8              	100.00%
Bootstrap support for Q752X2 as seed ortholog is 100%.
Bootstrap support for B8CDU8 as seed ortholog is 100%.

Group of orthologs #1422. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.pseudonana:55

Q75FA3              	100.00%		B8CCY0              	100.00%
Bootstrap support for Q75FA3 as seed ortholog is 100%.
Bootstrap support for B8CCY0 as seed ortholog is 100%.

Group of orthologs #1423. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:54

Q75AY2              	100.00%		B5YM08              	100.00%
                    	       		B8LD37              	16.76%
                    	       		B8BQA2              	8.38%
Bootstrap support for Q75AY2 as seed ortholog is 100%.
Bootstrap support for B5YM08 as seed ortholog is 100%.

Group of orthologs #1424. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:54

Q759C2              	100.00%		B8BV82              	100.00%
Bootstrap support for Q759C2 as seed ortholog is 100%.
Bootstrap support for B8BV82 as seed ortholog is 100%.

Group of orthologs #1425. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:54

Q753I5              	100.00%		B8C3T9              	100.00%
Bootstrap support for Q753I5 as seed ortholog is 100%.
Bootstrap support for B8C3T9 as seed ortholog is 100%.

Group of orthologs #1426. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:54

Q750F7              	100.00%		B8CDY0              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for B8CDY0 as seed ortholog is 100%.

Group of orthologs #1427. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:54

Q753W5              	100.00%		B8CCG5              	100.00%
Bootstrap support for Q753W5 as seed ortholog is 100%.
Bootstrap support for B8CCG5 as seed ortholog is 100%.

Group of orthologs #1428. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.pseudonana:54

Q754A5              	100.00%		B8CFX4              	100.00%
Bootstrap support for Q754A5 as seed ortholog is 100%.
Bootstrap support for B8CFX4 as seed ortholog is 100%.

Group of orthologs #1429. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.pseudonana:53

Q751R3              	100.00%		B8C296              	100.00%
Bootstrap support for Q751R3 as seed ortholog is 100%.
Bootstrap support for B8C296 as seed ortholog is 100%.

Group of orthologs #1430. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.pseudonana:53

Q752E1              	100.00%		B8C6B3              	100.00%
Bootstrap support for Q752E1 as seed ortholog is 100%.
Bootstrap support for B8C6B3 as seed ortholog is 100%.

Group of orthologs #1431. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.pseudonana:53

Q75B61              	100.00%		B8C5P5              	100.00%
Bootstrap support for Q75B61 as seed ortholog is 100%.
Bootstrap support for B8C5P5 as seed ortholog is 100%.

Group of orthologs #1432. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.pseudonana:53

Q751R1              	100.00%		B8LCR9              	100.00%
Bootstrap support for Q751R1 as seed ortholog is 100%.
Bootstrap support for B8LCR9 as seed ortholog is 100%.

Group of orthologs #1433. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.pseudonana:53

Q755N8              	100.00%		B8CGC9              	100.00%
Bootstrap support for Q755N8 as seed ortholog is 100%.
Bootstrap support for B8CGC9 as seed ortholog is 100%.

Group of orthologs #1434. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.pseudonana:52

Q75F51              	100.00%		B5YPA5              	100.00%
Q75AJ8              	10.63%		B8BXI1              	17.73%
Bootstrap support for Q75F51 as seed ortholog is 100%.
Bootstrap support for B5YPA5 as seed ortholog is 100%.

Group of orthologs #1435. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.pseudonana:52

Q756C9              	100.00%		B8C596              	100.00%
                    	       		B8BQ16              	18.66%
Bootstrap support for Q756C9 as seed ortholog is 100%.
Bootstrap support for B8C596 as seed ortholog is 100%.

Group of orthologs #1436. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.pseudonana:52

Q75AC1              	100.00%		B8BXE5              	100.00%
Bootstrap support for Q75AC1 as seed ortholog is 100%.
Bootstrap support for B8BXE5 as seed ortholog is 100%.

Group of orthologs #1437. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.pseudonana:52

Q74ZL0              	100.00%		B8C5N3              	100.00%
Bootstrap support for Q74ZL0 as seed ortholog is 100%.
Bootstrap support for B8C5N3 as seed ortholog is 100%.

Group of orthologs #1438. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.pseudonana:51

Q755A3              	100.00%		B8C4J4              	100.00%
Bootstrap support for Q755A3 as seed ortholog is 100%.
Bootstrap support for B8C4J4 as seed ortholog is 100%.

Group of orthologs #1439. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.pseudonana:50

Q75CV5              	100.00%		B8BTK5              	100.00%
Bootstrap support for Q75CV5 as seed ortholog is 100%.
Bootstrap support for B8BTK5 as seed ortholog is 100%.

Group of orthologs #1440. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.pseudonana:49

Q759Z2              	100.00%		B8CBI4              	100.00%
                    	       		B8CBV5              	100.00%
                    	       		B8BT08              	53.00%
Bootstrap support for Q759Z2 as seed ortholog is 100%.
Bootstrap support for B8CBI4 as seed ortholog is 100%.
Bootstrap support for B8CBV5 as seed ortholog is 100%.

Group of orthologs #1441. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.pseudonana:49

Q75BP5              	100.00%		B8BVS2              	100.00%
Q74ZU7              	36.06%		
Bootstrap support for Q75BP5 as seed ortholog is 100%.
Bootstrap support for B8BVS2 as seed ortholog is 100%.

Group of orthologs #1442. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.pseudonana:49

Q759P7              	100.00%		B8BW90              	100.00%
Bootstrap support for Q759P7 as seed ortholog is 100%.
Bootstrap support for B8BW90 as seed ortholog is 100%.

Group of orthologs #1443. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.pseudonana:49

Q75F30              	100.00%		B8CAL9              	100.00%
Bootstrap support for Q75F30 as seed ortholog is 100%.
Bootstrap support for B8CAL9 as seed ortholog is 100%.

Group of orthologs #1444. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.pseudonana:49

Q75F46              	100.00%		B8CB92              	100.00%
Bootstrap support for Q75F46 as seed ortholog is 100%.
Bootstrap support for B8CB92 as seed ortholog is 100%.

Group of orthologs #1445. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.pseudonana:48

Q758Z3              	100.00%		B8BRZ5              	100.00%
                    	       		B8C0T4              	40.28%
                    	       		B8BRZ6              	37.60%
                    	       		B8BRZ7              	34.76%
                    	       		B8C8R4              	30.33%
                    	       		B8BUU7              	19.27%
                    	       		B8CDE5              	17.22%
                    	       		B8CCZ3              	12.80%
                    	       		B8CCZ0              	12.32%
                    	       		B8BW22              	11.85%
                    	       		B8CCY7              	11.85%
                    	       		B8BW23              	11.85%
                    	       		B8BVI5              	11.53%
                    	       		B8CD69              	11.37%
                    	       		B8LDJ2              	10.58%
                    	       		B8BUL6              	10.58%
                    	       		B8CE91              	10.43%
                    	       		B8C6A9              	10.27%
                    	       		B8CCY9              	9.32%
                    	       		B8CCZ4              	8.85%
                    	       		B5YM72              	7.90%
                    	       		B8CAX4              	6.95%
                    	       		B8C621              	6.79%
                    	       		B8C608              	6.64%
                    	       		B8CAX6              	6.32%
Bootstrap support for Q758Z3 as seed ortholog is 100%.
Bootstrap support for B8BRZ5 as seed ortholog is 100%.

Group of orthologs #1446. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.pseudonana:1

Q759F3              	100.00%		B8C773              	100.00%
Bootstrap support for Q759F3 as seed ortholog is 100%.
Bootstrap support for B8C773 as seed ortholog is 47%.
Alternative seed ortholog is B8CCE2 (1 bits away from this cluster)

Group of orthologs #1447. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.pseudonana:48

Q75EL6              	100.00%		B8C758              	100.00%
Bootstrap support for Q75EL6 as seed ortholog is 100%.
Bootstrap support for B8C758 as seed ortholog is 100%.

Group of orthologs #1448. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.pseudonana:47

Q753P4              	100.00%		B5YMJ9              	100.00%
                    	       		B8C1I6              	100.00%
Bootstrap support for Q753P4 as seed ortholog is 100%.
Bootstrap support for B5YMJ9 as seed ortholog is 100%.
Bootstrap support for B8C1I6 as seed ortholog is 100%.

Group of orthologs #1449. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.pseudonana:47

Q75AK9              	100.00%		B8LCP2              	100.00%
Q750H5              	6.63%		
Bootstrap support for Q75AK9 as seed ortholog is 100%.
Bootstrap support for B8LCP2 as seed ortholog is 100%.

Group of orthologs #1450. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.pseudonana:46

Q758Q7              	100.00%		B8CAT8              	100.00%
                    	       		B8CAT5              	56.59%
Bootstrap support for Q758Q7 as seed ortholog is 100%.
Bootstrap support for B8CAT8 as seed ortholog is 100%.

Group of orthologs #1451. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.pseudonana:46

Q74Z33              	100.00%		B8BWL3              	100.00%
Bootstrap support for Q74Z33 as seed ortholog is 100%.
Bootstrap support for B8BWL3 as seed ortholog is 100%.

Group of orthologs #1452. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.pseudonana:46

Q754L3              	100.00%		B8C4E3              	100.00%
Bootstrap support for Q754L3 as seed ortholog is 100%.
Bootstrap support for B8C4E3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.pseudonana:46

Q75CP5              	100.00%		B8BYY4              	100.00%
Bootstrap support for Q75CP5 as seed ortholog is 100%.
Bootstrap support for B8BYY4 as seed ortholog is 100%.

Group of orthologs #1454. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.pseudonana:45

Q757P7              	100.00%		B5YP61              	100.00%
Bootstrap support for Q757P7 as seed ortholog is 100%.
Bootstrap support for B5YP61 as seed ortholog is 100%.

Group of orthologs #1455. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.pseudonana:45

Q74ZB5              	100.00%		B8BXU9              	100.00%
Bootstrap support for Q74ZB5 as seed ortholog is 100%.
Bootstrap support for B8BXU9 as seed ortholog is 100%.

Group of orthologs #1456. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.pseudonana:44

Q757H4              	100.00%		B8BW56              	100.00%
                    	       		B8CCU0              	22.61%
                    	       		B8CCU1              	21.81%
                    	       		B8CCS4              	19.68%
                    	       		B8BWD1              	9.84%
                    	       		B8C4S9              	7.98%
Bootstrap support for Q757H4 as seed ortholog is 100%.
Bootstrap support for B8BW56 as seed ortholog is 100%.

Group of orthologs #1457. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.pseudonana:1

Q75AR2              	100.00%		B8BWI9              	100.00%
Bootstrap support for Q75AR2 as seed ortholog is 100%.
Bootstrap support for B8BWI9 as seed ortholog is 48%.
Alternative seed ortholog is B8CA03 (1 bits away from this cluster)

Group of orthologs #1458. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.pseudonana:43

Q9HF53              	100.00%		B8LET3              	100.00%
                    	       		A0T0S2              	100.00%
Bootstrap support for Q9HF53 as seed ortholog is 100%.
Bootstrap support for B8LET3 as seed ortholog is 100%.
Bootstrap support for A0T0S2 as seed ortholog is 100%.

Group of orthologs #1459. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.pseudonana:43

Q759V6              	100.00%		B8C879              	100.00%
                    	       		B8C9H8              	10.45%
Bootstrap support for Q759V6 as seed ortholog is 100%.
Bootstrap support for B8C879 as seed ortholog is 100%.

Group of orthologs #1460. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.pseudonana:42

Q756U8              	100.00%		B8BVU9              	100.00%
Bootstrap support for Q756U8 as seed ortholog is 100%.
Bootstrap support for B8BVU9 as seed ortholog is 100%.

Group of orthologs #1461. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.pseudonana:42

Q75BM4              	100.00%		B8C404              	100.00%
Bootstrap support for Q75BM4 as seed ortholog is 100%.
Bootstrap support for B8C404 as seed ortholog is 100%.

Group of orthologs #1462. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.pseudonana:41

Q754S6              	100.00%		B8BWE4              	100.00%
Q756K7              	11.06%		
Q754A7              	5.16%		
Bootstrap support for Q754S6 as seed ortholog is 100%.
Bootstrap support for B8BWE4 as seed ortholog is 100%.

Group of orthologs #1463. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.pseudonana:41

P62511              	100.00%		B8C4B7              	100.00%
                    	       		B8BZ40              	10.23%
Bootstrap support for P62511 as seed ortholog is 100%.
Bootstrap support for B8C4B7 as seed ortholog is 100%.

Group of orthologs #1464. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.pseudonana:41

Q759T5              	100.00%		B8C4K1              	100.00%
                    	       		B8LF00              	57.61%
Bootstrap support for Q759T5 as seed ortholog is 100%.
Bootstrap support for B8C4K1 as seed ortholog is 100%.

Group of orthologs #1465. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.pseudonana:40

Q75AK4              	100.00%		B8BQV8              	100.00%
                    	       		B8BT07              	36.64%
Bootstrap support for Q75AK4 as seed ortholog is 100%.
Bootstrap support for B8BQV8 as seed ortholog is 100%.

Group of orthologs #1466. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.pseudonana:40

Q75BU8              	100.00%		B8BY83              	100.00%
Bootstrap support for Q75BU8 as seed ortholog is 100%.
Bootstrap support for B8BY83 as seed ortholog is 100%.