###################################
1527 groups of orthologs
1611 in-paralogs from A.gossypii
3155 in-paralogs from T.chinensis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3061 bits
Score difference with first non-orthologous sequence - A.gossypii:3061 T.chinensis:3061

Q75D15              	100.00%		L8Y837              	100.00%
Bootstrap support for Q75D15 as seed ortholog is 100%.
Bootstrap support for L8Y837 as seed ortholog is 100%.

Group of orthologs #2. Best score 2072 bits
Score difference with first non-orthologous sequence - A.gossypii:2072 T.chinensis:694

Q75BK8              	100.00%		L8YF35              	100.00%
Bootstrap support for Q75BK8 as seed ortholog is 100%.
Bootstrap support for L8YF35 as seed ortholog is 100%.

Group of orthologs #3. Best score 1992 bits
Score difference with first non-orthologous sequence - A.gossypii:1992 T.chinensis:1992

Q74ZY4              	100.00%		L9JVP4              	100.00%
Bootstrap support for Q74ZY4 as seed ortholog is 100%.
Bootstrap support for L9JVP4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1936 bits
Score difference with first non-orthologous sequence - A.gossypii:1936 T.chinensis:1936

Q753A4              	100.00%		L9L5G0              	100.00%
Bootstrap support for Q753A4 as seed ortholog is 100%.
Bootstrap support for L9L5G0 as seed ortholog is 100%.

Group of orthologs #5. Best score 1807 bits
Score difference with first non-orthologous sequence - A.gossypii:1807 T.chinensis:1807

Q75EK8              	100.00%		L9KKS8              	100.00%
                    	       		L9KM26              	44.44%
Bootstrap support for Q75EK8 as seed ortholog is 100%.
Bootstrap support for L9KKS8 as seed ortholog is 100%.

Group of orthologs #6. Best score 1787 bits
Score difference with first non-orthologous sequence - A.gossypii:1787 T.chinensis:1787

Q75A34              	100.00%		L9KM99              	100.00%
Bootstrap support for Q75A34 as seed ortholog is 100%.
Bootstrap support for L9KM99 as seed ortholog is 100%.

Group of orthologs #7. Best score 1509 bits
Score difference with first non-orthologous sequence - A.gossypii:1509 T.chinensis:1509

Q756A8              	100.00%		L9KFS2              	100.00%
                    	       		L9KU59              	30.96%
Bootstrap support for Q756A8 as seed ortholog is 100%.
Bootstrap support for L9KFS2 as seed ortholog is 100%.

Group of orthologs #8. Best score 1485 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.chinensis:676

Q74ZT5              	100.00%		L8Y5L5              	100.00%
Bootstrap support for Q74ZT5 as seed ortholog is 99%.
Bootstrap support for L8Y5L5 as seed ortholog is 100%.

Group of orthologs #9. Best score 1471 bits
Score difference with first non-orthologous sequence - A.gossypii:1471 T.chinensis:1471

Q752B8              	100.00%		L9L0R0              	100.00%
Bootstrap support for Q752B8 as seed ortholog is 100%.
Bootstrap support for L9L0R0 as seed ortholog is 100%.

Group of orthologs #10. Best score 1325 bits
Score difference with first non-orthologous sequence - A.gossypii:1325 T.chinensis:1325

Q756K2              	100.00%		L9KG76              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 100%.
Bootstrap support for L9KG76 as seed ortholog is 100%.

Group of orthologs #11. Best score 1257 bits
Score difference with first non-orthologous sequence - A.gossypii:1257 T.chinensis:1257

Q755X5              	100.00%		L9KQZ3              	100.00%
Bootstrap support for Q755X5 as seed ortholog is 100%.
Bootstrap support for L9KQZ3 as seed ortholog is 100%.

Group of orthologs #12. Best score 1181 bits
Score difference with first non-orthologous sequence - A.gossypii:1181 T.chinensis:804

Q75ED6              	100.00%		L8Y039              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for L8Y039 as seed ortholog is 100%.

Group of orthologs #13. Best score 1143 bits
Score difference with first non-orthologous sequence - A.gossypii:709 T.chinensis:733

Q754B2              	100.00%		L9L6K9              	100.00%
Bootstrap support for Q754B2 as seed ortholog is 100%.
Bootstrap support for L9L6K9 as seed ortholog is 100%.

Group of orthologs #14. Best score 1107 bits
Score difference with first non-orthologous sequence - A.gossypii:290 T.chinensis:545

Q75AI4              	100.00%		L9LDJ8              	100.00%
Bootstrap support for Q75AI4 as seed ortholog is 100%.
Bootstrap support for L9LDJ8 as seed ortholog is 100%.

Group of orthologs #15. Best score 1065 bits
Score difference with first non-orthologous sequence - A.gossypii:1065 T.chinensis:1065

Q759A3              	100.00%		L8Y313              	100.00%
Bootstrap support for Q759A3 as seed ortholog is 100%.
Bootstrap support for L8Y313 as seed ortholog is 100%.

Group of orthologs #16. Best score 1062 bits
Score difference with first non-orthologous sequence - A.gossypii:1062 T.chinensis:520

Q9C1M7              	100.00%		L8YB74              	100.00%
                    	       		L9KT49              	17.99%
                    	       		L9KWE0              	15.20%
                    	       		L9KLG2              	13.74%
                    	       		L9KIJ7              	10.38%
                    	       		L9KZN6              	6.83%
                    	       		L9KSY4              	6.51%
                    	       		L8Y5X7              	5.03%
Bootstrap support for Q9C1M7 as seed ortholog is 100%.
Bootstrap support for L8YB74 as seed ortholog is 100%.

Group of orthologs #17. Best score 1028 bits
Score difference with first non-orthologous sequence - A.gossypii:1028 T.chinensis:1028

Q752Y8              	100.00%		L8YGD0              	100.00%
                    	       		L9LBF2              	50.07%
                    	       		L9LBJ2              	20.17%
Bootstrap support for Q752Y8 as seed ortholog is 100%.
Bootstrap support for L8YGD0 as seed ortholog is 100%.

Group of orthologs #18. Best score 1021 bits
Score difference with first non-orthologous sequence - A.gossypii:1021 T.chinensis:1021

Q755V8              	100.00%		L9KIJ1              	100.00%
                    	       		L9JX05              	29.17%
Bootstrap support for Q755V8 as seed ortholog is 100%.
Bootstrap support for L9KIJ1 as seed ortholog is 100%.

Group of orthologs #19. Best score 998 bits
Score difference with first non-orthologous sequence - A.gossypii:285 T.chinensis:44

Q750B0              	100.00%		L9L2R7              	100.00%
                    	       		L9KY95              	8.37%
Bootstrap support for Q750B0 as seed ortholog is 99%.
Bootstrap support for L9L2R7 as seed ortholog is 69%.
Alternative seed ortholog is L9JJJ6 (44 bits away from this cluster)

Group of orthologs #20. Best score 993 bits
Score difference with first non-orthologous sequence - A.gossypii:840 T.chinensis:259

Q75EP5              	100.00%		L9KG30              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for L9KG30 as seed ortholog is 99%.

Group of orthologs #21. Best score 983 bits
Score difference with first non-orthologous sequence - A.gossypii:983 T.chinensis:223

Q75CP0              	100.00%		L9LAQ5              	100.00%
Q756S6              	17.37%		
Bootstrap support for Q75CP0 as seed ortholog is 100%.
Bootstrap support for L9LAQ5 as seed ortholog is 99%.

Group of orthologs #22. Best score 972 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.chinensis:259

Q756R7              	100.00%		L9KT34              	100.00%
Q754F6              	29.93%		L9KL52              	32.69%
                    	       		L9KGR2              	28.53%
                    	       		L9L765              	23.40%
                    	       		L9L755              	13.46%
Bootstrap support for Q756R7 as seed ortholog is 100%.
Bootstrap support for L9KT34 as seed ortholog is 100%.

Group of orthologs #23. Best score 968 bits
Score difference with first non-orthologous sequence - A.gossypii:329 T.chinensis:267

Q75EQ9              	100.00%		L8Y475              	100.00%
Bootstrap support for Q75EQ9 as seed ortholog is 100%.
Bootstrap support for L8Y475 as seed ortholog is 100%.

Group of orthologs #24. Best score 963 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.chinensis:759

Q75AE9              	100.00%		L9KND0              	100.00%
Bootstrap support for Q75AE9 as seed ortholog is 99%.
Bootstrap support for L9KND0 as seed ortholog is 100%.

Group of orthologs #25. Best score 937 bits
Score difference with first non-orthologous sequence - A.gossypii:937 T.chinensis:937

Q75DS1              	100.00%		L9JM71              	100.00%
Bootstrap support for Q75DS1 as seed ortholog is 100%.
Bootstrap support for L9JM71 as seed ortholog is 100%.

Group of orthologs #26. Best score 926 bits
Score difference with first non-orthologous sequence - A.gossypii:926 T.chinensis:926

Q759E3              	100.00%		L9KJ09              	100.00%
Bootstrap support for Q759E3 as seed ortholog is 100%.
Bootstrap support for L9KJ09 as seed ortholog is 100%.

Group of orthologs #27. Best score 922 bits
Score difference with first non-orthologous sequence - A.gossypii:922 T.chinensis:922

Q75B52              	100.00%		L8Y6I1              	100.00%
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for L8Y6I1 as seed ortholog is 100%.

Group of orthologs #28. Best score 892 bits
Score difference with first non-orthologous sequence - A.gossypii:892 T.chinensis:892

Q758L7              	100.00%		L9KVI2              	100.00%
Bootstrap support for Q758L7 as seed ortholog is 100%.
Bootstrap support for L9KVI2 as seed ortholog is 100%.

Group of orthologs #29. Best score 892 bits
Score difference with first non-orthologous sequence - A.gossypii:892 T.chinensis:892

Q75DS7              	100.00%		L9KWR6              	100.00%
Bootstrap support for Q75DS7 as seed ortholog is 100%.
Bootstrap support for L9KWR6 as seed ortholog is 100%.

Group of orthologs #30. Best score 888 bits
Score difference with first non-orthologous sequence - A.gossypii:309 T.chinensis:106

Q759C7              	100.00%		L9KE44              	100.00%
Bootstrap support for Q759C7 as seed ortholog is 100%.
Bootstrap support for L9KE44 as seed ortholog is 92%.

Group of orthologs #31. Best score 881 bits
Score difference with first non-orthologous sequence - A.gossypii:881 T.chinensis:881

Q754A3              	100.00%		L9KLJ8              	100.00%
Bootstrap support for Q754A3 as seed ortholog is 100%.
Bootstrap support for L9KLJ8 as seed ortholog is 100%.

Group of orthologs #32. Best score 876 bits
Score difference with first non-orthologous sequence - A.gossypii:876 T.chinensis:876

Q74Z60              	100.00%		L8YBH3              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for L8YBH3 as seed ortholog is 100%.

Group of orthologs #33. Best score 869 bits
Score difference with first non-orthologous sequence - A.gossypii:869 T.chinensis:237

Q8J2M3              	100.00%		L9KSG8              	100.00%
Bootstrap support for Q8J2M3 as seed ortholog is 100%.
Bootstrap support for L9KSG8 as seed ortholog is 99%.

Group of orthologs #34. Best score 851 bits
Score difference with first non-orthologous sequence - A.gossypii:543 T.chinensis:448

Q75AK6              	100.00%		L9L9P7              	100.00%
Bootstrap support for Q75AK6 as seed ortholog is 100%.
Bootstrap support for L9L9P7 as seed ortholog is 100%.

Group of orthologs #35. Best score 847 bits
Score difference with first non-orthologous sequence - A.gossypii:847 T.chinensis:847

Q758E3              	100.00%		L9KSM6              	100.00%
Bootstrap support for Q758E3 as seed ortholog is 100%.
Bootstrap support for L9KSM6 as seed ortholog is 100%.

Group of orthologs #36. Best score 844 bits
Score difference with first non-orthologous sequence - A.gossypii:730 T.chinensis:844

Q75C64              	100.00%		L9LFN0              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for L9LFN0 as seed ortholog is 100%.

Group of orthologs #37. Best score 843 bits
Score difference with first non-orthologous sequence - A.gossypii:843 T.chinensis:843

Q74Z48              	100.00%		L9LDX0              	100.00%
Bootstrap support for Q74Z48 as seed ortholog is 100%.
Bootstrap support for L9LDX0 as seed ortholog is 100%.

Group of orthologs #38. Best score 839 bits
Score difference with first non-orthologous sequence - A.gossypii:839 T.chinensis:839

Q74ZJ9              	100.00%		L9KJ93              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for L9KJ93 as seed ortholog is 100%.

Group of orthologs #39. Best score 820 bits
Score difference with first non-orthologous sequence - A.gossypii:820 T.chinensis:358

Q75C49              	100.00%		L9KY00              	100.00%
                    	       		L9J9W2              	52.65%
                    	       		L9JV42              	46.16%
                    	       		L9JPB9              	32.21%
                    	       		L9KQ24              	19.72%
                    	       		L9JRG1              	18.27%
                    	       		L9JS86              	15.62%
                    	       		L9JRW5              	14.75%
                    	       		L9JRD0              	12.91%
                    	       		L9JV64              	12.43%
                    	       		L8Y496              	8.23%
Bootstrap support for Q75C49 as seed ortholog is 100%.
Bootstrap support for L9KY00 as seed ortholog is 99%.

Group of orthologs #40. Best score 812 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:247

Q75C78              	100.00%		L9JDA9              	100.00%
Bootstrap support for Q75C78 as seed ortholog is 99%.
Bootstrap support for L9JDA9 as seed ortholog is 100%.

Group of orthologs #41. Best score 793 bits
Score difference with first non-orthologous sequence - A.gossypii:793 T.chinensis:793

Q755Z2              	100.00%		L9KPL1              	100.00%
Q752L2              	15.28%		L8YFY5              	50.49%
Bootstrap support for Q755Z2 as seed ortholog is 100%.
Bootstrap support for L9KPL1 as seed ortholog is 100%.

Group of orthologs #42. Best score 781 bits
Score difference with first non-orthologous sequence - A.gossypii:781 T.chinensis:781

Q75AP8              	100.00%		L9KQ84              	100.00%
Bootstrap support for Q75AP8 as seed ortholog is 100%.
Bootstrap support for L9KQ84 as seed ortholog is 100%.

Group of orthologs #43. Best score 775 bits
Score difference with first non-orthologous sequence - A.gossypii:775 T.chinensis:775

Q75F16              	100.00%		L9KU38              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for L9KU38 as seed ortholog is 100%.

Group of orthologs #44. Best score 771 bits
Score difference with first non-orthologous sequence - A.gossypii:771 T.chinensis:306

Q755Z3              	100.00%		L8Y6B0              	100.00%
Bootstrap support for Q755Z3 as seed ortholog is 100%.
Bootstrap support for L8Y6B0 as seed ortholog is 100%.

Group of orthologs #45. Best score 771 bits
Score difference with first non-orthologous sequence - A.gossypii:771 T.chinensis:237

Q759B4              	100.00%		L9KKM0              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for L9KKM0 as seed ortholog is 99%.

Group of orthologs #46. Best score 765 bits
Score difference with first non-orthologous sequence - A.gossypii:530 T.chinensis:171

P41752              	100.00%		L8Y334              	100.00%
Bootstrap support for P41752 as seed ortholog is 100%.
Bootstrap support for L8Y334 as seed ortholog is 100%.

Group of orthologs #47. Best score 763 bits
Score difference with first non-orthologous sequence - A.gossypii:763 T.chinensis:763

Q753Q4              	100.00%		L8Y9R4              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for L8Y9R4 as seed ortholog is 100%.

Group of orthologs #48. Best score 762 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.chinensis:157

Q759P9              	100.00%		L9KK01              	100.00%
Bootstrap support for Q759P9 as seed ortholog is 99%.
Bootstrap support for L9KK01 as seed ortholog is 99%.

Group of orthologs #49. Best score 760 bits
Score difference with first non-orthologous sequence - A.gossypii:760 T.chinensis:760

Q755E1              	100.00%		L9JD94              	100.00%
Bootstrap support for Q755E1 as seed ortholog is 100%.
Bootstrap support for L9JD94 as seed ortholog is 100%.

Group of orthologs #50. Best score 752 bits
Score difference with first non-orthologous sequence - A.gossypii:752 T.chinensis:330

Q75DQ3              	100.00%		L9KMW1              	100.00%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for L9KMW1 as seed ortholog is 100%.

Group of orthologs #51. Best score 745 bits
Score difference with first non-orthologous sequence - A.gossypii:745 T.chinensis:745

Q752M7              	100.00%		L9J8X4              	100.00%
                    	       		L8YD23              	45.24%
                    	       		L9KQ73              	17.25%
Bootstrap support for Q752M7 as seed ortholog is 100%.
Bootstrap support for L9J8X4 as seed ortholog is 100%.

Group of orthologs #52. Best score 744 bits
Score difference with first non-orthologous sequence - A.gossypii:744 T.chinensis:744

Q74ZT4              	100.00%		L9L7M3              	100.00%
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for L9L7M3 as seed ortholog is 100%.

Group of orthologs #53. Best score 742 bits
Score difference with first non-orthologous sequence - A.gossypii:742 T.chinensis:742

Q753N2              	100.00%		L9KHQ2              	100.00%
Bootstrap support for Q753N2 as seed ortholog is 100%.
Bootstrap support for L9KHQ2 as seed ortholog is 100%.

Group of orthologs #54. Best score 741 bits
Score difference with first non-orthologous sequence - A.gossypii:741 T.chinensis:741

Q751H8              	100.00%		L9L2H2              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for L9L2H2 as seed ortholog is 100%.

Group of orthologs #55. Best score 735 bits
Score difference with first non-orthologous sequence - A.gossypii:629 T.chinensis:735

Q75D54              	100.00%		L8Y6L4              	100.00%
Bootstrap support for Q75D54 as seed ortholog is 100%.
Bootstrap support for L8Y6L4 as seed ortholog is 100%.

Group of orthologs #56. Best score 732 bits
Score difference with first non-orthologous sequence - A.gossypii:732 T.chinensis:732

Q75DY5              	100.00%		L9L6Q0              	100.00%
Bootstrap support for Q75DY5 as seed ortholog is 100%.
Bootstrap support for L9L6Q0 as seed ortholog is 100%.

Group of orthologs #57. Best score 730 bits
Score difference with first non-orthologous sequence - A.gossypii:730 T.chinensis:588

Q759G7              	100.00%		L9KTU0              	100.00%
Bootstrap support for Q759G7 as seed ortholog is 100%.
Bootstrap support for L9KTU0 as seed ortholog is 100%.

Group of orthologs #58. Best score 729 bits
Score difference with first non-orthologous sequence - A.gossypii:729 T.chinensis:305

Q75ES1              	100.00%		L9J992              	100.00%
Bootstrap support for Q75ES1 as seed ortholog is 100%.
Bootstrap support for L9J992 as seed ortholog is 100%.

Group of orthologs #59. Best score 723 bits
Score difference with first non-orthologous sequence - A.gossypii:723 T.chinensis:723

Q75A42              	100.00%		L8Y8B0              	100.00%
Bootstrap support for Q75A42 as seed ortholog is 100%.
Bootstrap support for L8Y8B0 as seed ortholog is 100%.

Group of orthologs #60. Best score 722 bits
Score difference with first non-orthologous sequence - A.gossypii:236 T.chinensis:331

Q753R1              	100.00%		L8Y723              	100.00%
Bootstrap support for Q753R1 as seed ortholog is 99%.
Bootstrap support for L8Y723 as seed ortholog is 100%.

Group of orthologs #61. Best score 719 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:38

Q74ZS8              	100.00%		L8YD39              	100.00%
                    	       		L9L9I2              	25.88%
Bootstrap support for Q74ZS8 as seed ortholog is 98%.
Bootstrap support for L8YD39 as seed ortholog is 92%.

Group of orthologs #62. Best score 711 bits
Score difference with first non-orthologous sequence - A.gossypii:711 T.chinensis:216

Q752Y2              	100.00%		L8Y6H1              	100.00%
                    	       		L9JBF0              	53.55%
                    	       		L8Y379              	44.08%
                    	       		L9JDD1              	10.43%
                    	       		L8Y7C0              	9.00%
Bootstrap support for Q752Y2 as seed ortholog is 100%.
Bootstrap support for L8Y6H1 as seed ortholog is 100%.

Group of orthologs #63. Best score 701 bits
Score difference with first non-orthologous sequence - A.gossypii:701 T.chinensis:701

Q75F27              	100.00%		L9JHS0              	100.00%
Bootstrap support for Q75F27 as seed ortholog is 100%.
Bootstrap support for L9JHS0 as seed ortholog is 100%.

Group of orthologs #64. Best score 699 bits
Score difference with first non-orthologous sequence - A.gossypii:356 T.chinensis:268

Q754Q9              	100.00%		L9KJE5              	100.00%
Bootstrap support for Q754Q9 as seed ortholog is 100%.
Bootstrap support for L9KJE5 as seed ortholog is 100%.

Group of orthologs #65. Best score 697 bits
Score difference with first non-orthologous sequence - A.gossypii:413 T.chinensis:697

Q75CZ5              	100.00%		L9KPV7              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 100%.
Bootstrap support for L9KPV7 as seed ortholog is 100%.

Group of orthologs #66. Best score 696 bits
Score difference with first non-orthologous sequence - A.gossypii:375 T.chinensis:310

Q74Z27              	100.00%		L9JC31              	100.00%
Bootstrap support for Q74Z27 as seed ortholog is 100%.
Bootstrap support for L9JC31 as seed ortholog is 100%.

Group of orthologs #67. Best score 690 bits
Score difference with first non-orthologous sequence - A.gossypii:300 T.chinensis:106

Q75D00              	100.00%		L9L479              	100.00%
                    	       		L9L4N0              	32.79%
                    	       		L9KM54              	18.58%
                    	       		L9KS98              	13.66%
                    	       		L9L8D0              	9.84%
                    	       		L9KVG3              	8.20%
Bootstrap support for Q75D00 as seed ortholog is 100%.
Bootstrap support for L9L479 as seed ortholog is 100%.

Group of orthologs #68. Best score 685 bits
Score difference with first non-orthologous sequence - A.gossypii:685 T.chinensis:685

Q75C45              	100.00%		L9J8J9              	100.00%
Bootstrap support for Q75C45 as seed ortholog is 100%.
Bootstrap support for L9J8J9 as seed ortholog is 100%.

Group of orthologs #69. Best score 682 bits
Score difference with first non-orthologous sequence - A.gossypii:682 T.chinensis:682

Q75CF8              	100.00%		L9KTK3              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 100%.
Bootstrap support for L9KTK3 as seed ortholog is 100%.

Group of orthologs #70. Best score 682 bits
Score difference with first non-orthologous sequence - A.gossypii:682 T.chinensis:682

Q759E6              	100.00%		L9KZK2              	100.00%
Bootstrap support for Q759E6 as seed ortholog is 100%.
Bootstrap support for L9KZK2 as seed ortholog is 100%.

Group of orthologs #71. Best score 679 bits
Score difference with first non-orthologous sequence - A.gossypii:679 T.chinensis:679

Q75BE4              	100.00%		L9JQV3              	100.00%
                    	       		L9KMU6              	8.06%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for L9JQV3 as seed ortholog is 100%.

Group of orthologs #72. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:448 T.chinensis:675

Q754P1              	100.00%		L9LAE1              	100.00%
Bootstrap support for Q754P1 as seed ortholog is 100%.
Bootstrap support for L9LAE1 as seed ortholog is 100%.

Group of orthologs #73. Best score 674 bits
Score difference with first non-orthologous sequence - A.gossypii:674 T.chinensis:45

Q752T2              	100.00%		L9LAV4              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for L9LAV4 as seed ortholog is 78%.

Group of orthologs #74. Best score 672 bits
Score difference with first non-orthologous sequence - A.gossypii:672 T.chinensis:506

Q753A6              	100.00%		L9L693              	100.00%
Bootstrap support for Q753A6 as seed ortholog is 100%.
Bootstrap support for L9L693 as seed ortholog is 100%.

Group of orthologs #75. Best score 669 bits
Score difference with first non-orthologous sequence - A.gossypii:669 T.chinensis:189

Q75BP6              	100.00%		L8YEE4              	100.00%
                    	       		L9LBQ0              	7.27%
Bootstrap support for Q75BP6 as seed ortholog is 100%.
Bootstrap support for L8YEE4 as seed ortholog is 100%.

Group of orthologs #76. Best score 669 bits
Score difference with first non-orthologous sequence - A.gossypii:669 T.chinensis:553

Q754K5              	100.00%		L9KMS6              	100.00%
Bootstrap support for Q754K5 as seed ortholog is 100%.
Bootstrap support for L9KMS6 as seed ortholog is 100%.

Group of orthologs #77. Best score 666 bits
Score difference with first non-orthologous sequence - A.gossypii:666 T.chinensis:666

Q750T6              	100.00%		L9L9Z1              	100.00%
                    	       		L9KQE8              	43.10%
Bootstrap support for Q750T6 as seed ortholog is 100%.
Bootstrap support for L9L9Z1 as seed ortholog is 100%.

Group of orthologs #78. Best score 664 bits
Score difference with first non-orthologous sequence - A.gossypii:664 T.chinensis:491

Q755V3              	100.00%		L9KZ21              	100.00%
Bootstrap support for Q755V3 as seed ortholog is 100%.
Bootstrap support for L9KZ21 as seed ortholog is 100%.

Group of orthologs #79. Best score 658 bits
Score difference with first non-orthologous sequence - A.gossypii:658 T.chinensis:658

Q75D18              	100.00%		L9KS74              	100.00%
                    	       		L9KRE9              	5.03%
Bootstrap support for Q75D18 as seed ortholog is 100%.
Bootstrap support for L9KS74 as seed ortholog is 100%.

Group of orthologs #80. Best score 658 bits
Score difference with first non-orthologous sequence - A.gossypii:359 T.chinensis:485

Q75C66              	100.00%		L9LB28              	100.00%
Bootstrap support for Q75C66 as seed ortholog is 100%.
Bootstrap support for L9LB28 as seed ortholog is 100%.

Group of orthologs #81. Best score 650 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.chinensis:50

Q74ZS5              	100.00%		L9L6W3              	100.00%
Bootstrap support for Q74ZS5 as seed ortholog is 99%.
Bootstrap support for L9L6W3 as seed ortholog is 81%.

Group of orthologs #82. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:649 T.chinensis:412

Q753Z4              	100.00%		L8Y541              	100.00%
Bootstrap support for Q753Z4 as seed ortholog is 100%.
Bootstrap support for L8Y541 as seed ortholog is 100%.

Group of orthologs #83. Best score 646 bits
Score difference with first non-orthologous sequence - A.gossypii:646 T.chinensis:646

Q74ZC3              	100.00%		L8Y6G1              	100.00%
Bootstrap support for Q74ZC3 as seed ortholog is 100%.
Bootstrap support for L8Y6G1 as seed ortholog is 100%.

Group of orthologs #84. Best score 645 bits
Score difference with first non-orthologous sequence - A.gossypii:645 T.chinensis:645

Q75A77              	100.00%		L9KQV4              	100.00%
Bootstrap support for Q75A77 as seed ortholog is 100%.
Bootstrap support for L9KQV4 as seed ortholog is 100%.

Group of orthologs #85. Best score 644 bits
Score difference with first non-orthologous sequence - A.gossypii:535 T.chinensis:644

Q758M7              	100.00%		L9KJN4              	100.00%
                    	       		L8Y9B9              	13.27%
Bootstrap support for Q758M7 as seed ortholog is 100%.
Bootstrap support for L9KJN4 as seed ortholog is 100%.

Group of orthologs #86. Best score 636 bits
Score difference with first non-orthologous sequence - A.gossypii:636 T.chinensis:200

Q759C3              	100.00%		L9L3M6              	100.00%
Bootstrap support for Q759C3 as seed ortholog is 100%.
Bootstrap support for L9L3M6 as seed ortholog is 99%.

Group of orthologs #87. Best score 635 bits
Score difference with first non-orthologous sequence - A.gossypii:408 T.chinensis:635

Q750C0              	100.00%		L9KPD0              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 100%.
Bootstrap support for L9KPD0 as seed ortholog is 100%.

Group of orthologs #88. Best score 629 bits
Score difference with first non-orthologous sequence - A.gossypii:629 T.chinensis:228

Q753T3              	100.00%		L9L344              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for L9L344 as seed ortholog is 100%.

Group of orthologs #89. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 T.chinensis:626

Q753V9              	100.00%		L9JFW1              	100.00%
Bootstrap support for Q753V9 as seed ortholog is 100%.
Bootstrap support for L9JFW1 as seed ortholog is 100%.

Group of orthologs #90. Best score 625 bits
Score difference with first non-orthologous sequence - A.gossypii:434 T.chinensis:625

Q757G0              	100.00%		L9KUU7              	100.00%
Bootstrap support for Q757G0 as seed ortholog is 100%.
Bootstrap support for L9KUU7 as seed ortholog is 100%.

Group of orthologs #91. Best score 624 bits
Score difference with first non-orthologous sequence - A.gossypii:624 T.chinensis:624

Q75EM2              	100.00%		L8Y241              	100.00%
Bootstrap support for Q75EM2 as seed ortholog is 100%.
Bootstrap support for L8Y241 as seed ortholog is 100%.

Group of orthologs #92. Best score 620 bits
Score difference with first non-orthologous sequence - A.gossypii:620 T.chinensis:620

Q758L0              	100.00%		L8XZK5              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for L8XZK5 as seed ortholog is 100%.

Group of orthologs #93. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:616 T.chinensis:616

Q755Q5              	100.00%		L8Y245              	100.00%
Q758H0              	18.17%		L8YA17              	47.33%
Bootstrap support for Q755Q5 as seed ortholog is 100%.
Bootstrap support for L8Y245 as seed ortholog is 100%.

Group of orthologs #94. Best score 613 bits
Score difference with first non-orthologous sequence - A.gossypii:572 T.chinensis:415

Q75CE3              	100.00%		L9L8F4              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for L9L8F4 as seed ortholog is 100%.

Group of orthologs #95. Best score 612 bits
Score difference with first non-orthologous sequence - A.gossypii:612 T.chinensis:612

Q752M8              	100.00%		L8Y5G5              	100.00%
Bootstrap support for Q752M8 as seed ortholog is 100%.
Bootstrap support for L8Y5G5 as seed ortholog is 100%.

Group of orthologs #96. Best score 607 bits
Score difference with first non-orthologous sequence - A.gossypii:298 T.chinensis:454

Q750J4              	100.00%		L9KYG5              	100.00%
Bootstrap support for Q750J4 as seed ortholog is 100%.
Bootstrap support for L9KYG5 as seed ortholog is 100%.

Group of orthologs #97. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:606 T.chinensis:350

Q75AE3              	100.00%		L8Y112              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 100%.
Bootstrap support for L8Y112 as seed ortholog is 100%.

Group of orthologs #98. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:606 T.chinensis:606

Q755Y6              	100.00%		L9JGV4              	100.00%
Bootstrap support for Q755Y6 as seed ortholog is 100%.
Bootstrap support for L9JGV4 as seed ortholog is 100%.

Group of orthologs #99. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 T.chinensis:601

Q74Z74              	100.00%		L8Y4C3              	100.00%
Bootstrap support for Q74Z74 as seed ortholog is 100%.
Bootstrap support for L8Y4C3 as seed ortholog is 100%.

Group of orthologs #100. Best score 599 bits
Score difference with first non-orthologous sequence - A.gossypii:265 T.chinensis:599

Q755G5              	100.00%		L9JA45              	100.00%
Bootstrap support for Q755G5 as seed ortholog is 100%.
Bootstrap support for L9JA45 as seed ortholog is 100%.

Group of orthologs #101. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:598 T.chinensis:598

Q753F9              	100.00%		L8Y4P6              	100.00%
Bootstrap support for Q753F9 as seed ortholog is 100%.
Bootstrap support for L8Y4P6 as seed ortholog is 100%.

Group of orthologs #102. Best score 597 bits
Score difference with first non-orthologous sequence - A.gossypii:597 T.chinensis:44

Q758Q9              	100.00%		L9L9K2              	100.00%
Bootstrap support for Q758Q9 as seed ortholog is 100%.
Bootstrap support for L9L9K2 as seed ortholog is 70%.
Alternative seed ortholog is L8Y9V0 (44 bits away from this cluster)

Group of orthologs #103. Best score 595 bits
Score difference with first non-orthologous sequence - A.gossypii:224 T.chinensis:455

Q758Q0              	100.00%		L8YE85              	100.00%
Bootstrap support for Q758Q0 as seed ortholog is 99%.
Bootstrap support for L8YE85 as seed ortholog is 100%.

Group of orthologs #104. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:357 T.chinensis:287

Q754T2              	100.00%		L9KGB9              	100.00%
                    	       		L9KLZ8              	65.39%
                    	       		L8Y5I9              	26.11%
                    	       		L9JAV3              	25.17%
Bootstrap support for Q754T2 as seed ortholog is 100%.
Bootstrap support for L9KGB9 as seed ortholog is 99%.

Group of orthologs #105. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:395 T.chinensis:171

Q758Q4              	100.00%		L9KJL4              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 100%.
Bootstrap support for L9KJL4 as seed ortholog is 99%.

Group of orthologs #106. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:594 T.chinensis:594

Q756R6              	100.00%		L9LDC1              	100.00%
Bootstrap support for Q756R6 as seed ortholog is 100%.
Bootstrap support for L9LDC1 as seed ortholog is 100%.

Group of orthologs #107. Best score 593 bits
Score difference with first non-orthologous sequence - A.gossypii:593 T.chinensis:593

Q759C0              	100.00%		L9KIP5              	100.00%
Bootstrap support for Q759C0 as seed ortholog is 100%.
Bootstrap support for L9KIP5 as seed ortholog is 100%.

Group of orthologs #108. Best score 592 bits
Score difference with first non-orthologous sequence - A.gossypii:325 T.chinensis:214

Q752K7              	100.00%		L9L5A7              	100.00%
Bootstrap support for Q752K7 as seed ortholog is 99%.
Bootstrap support for L9L5A7 as seed ortholog is 99%.

Group of orthologs #109. Best score 591 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:591

Q754C8              	100.00%		L8Y192              	100.00%
Bootstrap support for Q754C8 as seed ortholog is 95%.
Bootstrap support for L8Y192 as seed ortholog is 100%.

Group of orthologs #110. Best score 591 bits
Score difference with first non-orthologous sequence - A.gossypii:591 T.chinensis:448

Q751B1              	100.00%		L9KL80              	100.00%
Bootstrap support for Q751B1 as seed ortholog is 100%.
Bootstrap support for L9KL80 as seed ortholog is 100%.

Group of orthologs #111. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:586 T.chinensis:44

Q750T7              	100.00%		L8YEZ4              	100.00%
Q758X0              	22.02%		
Bootstrap support for Q750T7 as seed ortholog is 100%.
Bootstrap support for L8YEZ4 as seed ortholog is 83%.

Group of orthologs #112. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.chinensis:311

Q75B50              	100.00%		L8Y9S5              	100.00%
                    	       		L9KTK1              	65.13%
Bootstrap support for Q75B50 as seed ortholog is 100%.
Bootstrap support for L8Y9S5 as seed ortholog is 100%.

Group of orthologs #113. Best score 585 bits
Score difference with first non-orthologous sequence - A.gossypii:585 T.chinensis:585

Q75EU2              	100.00%		L8Y3K0              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for L8Y3K0 as seed ortholog is 100%.

Group of orthologs #114. Best score 585 bits
Score difference with first non-orthologous sequence - A.gossypii:585 T.chinensis:585

Q754E1              	100.00%		L9L121              	100.00%
Bootstrap support for Q754E1 as seed ortholog is 100%.
Bootstrap support for L9L121 as seed ortholog is 100%.

Group of orthologs #115. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.chinensis:284

Q755N4              	100.00%		L9KAU4              	100.00%
                    	       		L9KXR8              	28.96%
Bootstrap support for Q755N4 as seed ortholog is 100%.
Bootstrap support for L9KAU4 as seed ortholog is 100%.

Group of orthologs #116. Best score 581 bits
Score difference with first non-orthologous sequence - A.gossypii:581 T.chinensis:508

Q74ZS3              	100.00%		L8Y1S2              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for L8Y1S2 as seed ortholog is 100%.

Group of orthologs #117. Best score 579 bits
Score difference with first non-orthologous sequence - A.gossypii:579 T.chinensis:126

Q757P3              	100.00%		L9JBE9              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for L9JBE9 as seed ortholog is 96%.

Group of orthologs #118. Best score 572 bits
Score difference with first non-orthologous sequence - A.gossypii:310 T.chinensis:408

Q756K0              	100.00%		L9JIB5              	100.00%
Bootstrap support for Q756K0 as seed ortholog is 100%.
Bootstrap support for L9JIB5 as seed ortholog is 100%.

Group of orthologs #119. Best score 570 bits
Score difference with first non-orthologous sequence - A.gossypii:253 T.chinensis:570

Q750H4              	100.00%		L8Y503              	100.00%
Bootstrap support for Q750H4 as seed ortholog is 99%.
Bootstrap support for L8Y503 as seed ortholog is 100%.

Group of orthologs #120. Best score 569 bits
Score difference with first non-orthologous sequence - A.gossypii:433 T.chinensis:569

Q757N2              	100.00%		L9LCZ7              	100.00%
Bootstrap support for Q757N2 as seed ortholog is 100%.
Bootstrap support for L9LCZ7 as seed ortholog is 100%.

Group of orthologs #121. Best score 567 bits
Score difference with first non-orthologous sequence - A.gossypii:567 T.chinensis:264

Q75EA4              	100.00%		L9JS92              	100.00%
                    	       		L9JGH2              	10.26%
Bootstrap support for Q75EA4 as seed ortholog is 100%.
Bootstrap support for L9JS92 as seed ortholog is 99%.

Group of orthologs #122. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.chinensis:229

Q757P4              	100.00%		L9J991              	100.00%
Bootstrap support for Q757P4 as seed ortholog is 99%.
Bootstrap support for L9J991 as seed ortholog is 99%.

Group of orthologs #123. Best score 564 bits
Score difference with first non-orthologous sequence - A.gossypii:564 T.chinensis:465

Q756H2              	100.00%		L9L144              	100.00%
                    	       		L8Y0J7              	59.46%
                    	       		L9KLL7              	29.05%
                    	       		L9JK04              	19.93%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for L9L144 as seed ortholog is 100%.

Group of orthologs #124. Best score 563 bits
Score difference with first non-orthologous sequence - A.gossypii:563 T.chinensis:563

Q756A7              	100.00%		L8YCI1              	100.00%
Bootstrap support for Q756A7 as seed ortholog is 100%.
Bootstrap support for L8YCI1 as seed ortholog is 100%.

Group of orthologs #125. Best score 563 bits
Score difference with first non-orthologous sequence - A.gossypii:563 T.chinensis:563

Q759T9              	100.00%		L9L9S7              	100.00%
Bootstrap support for Q759T9 as seed ortholog is 100%.
Bootstrap support for L9L9S7 as seed ortholog is 100%.

Group of orthologs #126. Best score 559 bits
Score difference with first non-orthologous sequence - A.gossypii:289 T.chinensis:559

Q751F3              	100.00%		L9LCE2              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 99%.
Bootstrap support for L9LCE2 as seed ortholog is 100%.

Group of orthologs #127. Best score 558 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.chinensis:393

Q759L6              	100.00%		L9KG02              	100.00%
Bootstrap support for Q759L6 as seed ortholog is 100%.
Bootstrap support for L9KG02 as seed ortholog is 100%.

Group of orthologs #128. Best score 558 bits
Score difference with first non-orthologous sequence - A.gossypii:558 T.chinensis:368

Q75CS4              	100.00%		L9LBC4              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for L9LBC4 as seed ortholog is 100%.

Group of orthologs #129. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 T.chinensis:555

Q757E6              	100.00%		L9KGS2              	100.00%
Bootstrap support for Q757E6 as seed ortholog is 100%.
Bootstrap support for L9KGS2 as seed ortholog is 100%.

Group of orthologs #130. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:552 T.chinensis:416

Q756T4              	100.00%		L9JFN3              	100.00%
Bootstrap support for Q756T4 as seed ortholog is 100%.
Bootstrap support for L9JFN3 as seed ortholog is 100%.

Group of orthologs #131. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:551 T.chinensis:551

Q74Z21              	100.00%		L9L6N2              	100.00%
Bootstrap support for Q74Z21 as seed ortholog is 100%.
Bootstrap support for L9L6N2 as seed ortholog is 100%.

Group of orthologs #132. Best score 550 bits
Score difference with first non-orthologous sequence - A.gossypii:550 T.chinensis:550

Q759R7              	100.00%		L9KNY8              	100.00%
                    	       		L9KVR3              	7.78%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for L9KNY8 as seed ortholog is 100%.

Group of orthologs #133. Best score 546 bits
Score difference with first non-orthologous sequence - A.gossypii:546 T.chinensis:26

Q75AI2              	100.00%		L9JMH9              	100.00%
                    	       		L9L3Q6              	17.52%
Bootstrap support for Q75AI2 as seed ortholog is 100%.
Bootstrap support for L9JMH9 as seed ortholog is 72%.
Alternative seed ortholog is L9KXH5 (26 bits away from this cluster)

Group of orthologs #134. Best score 545 bits
Score difference with first non-orthologous sequence - A.gossypii:248 T.chinensis:394

Q753C2              	100.00%		L9LCJ1              	100.00%
Bootstrap support for Q753C2 as seed ortholog is 100%.
Bootstrap support for L9LCJ1 as seed ortholog is 100%.

Group of orthologs #135. Best score 543 bits
Score difference with first non-orthologous sequence - A.gossypii:543 T.chinensis:543

Q758T5              	100.00%		L9KY24              	100.00%
                    	       		L9KQV8              	8.48%
Bootstrap support for Q758T5 as seed ortholog is 100%.
Bootstrap support for L9KY24 as seed ortholog is 100%.

Group of orthologs #136. Best score 540 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:8

Q74Z12              	100.00%		L9JIK9              	100.00%
                    	       		L9JE93              	28.50%
Bootstrap support for Q74Z12 as seed ortholog is 99%.
Bootstrap support for L9JIK9 as seed ortholog is 44%.
Alternative seed ortholog is L8YGC3 (8 bits away from this cluster)

Group of orthologs #137. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 T.chinensis:539

Q759Z6              	100.00%		L9K0M1              	100.00%
Q759U6              	100.00%		L9KS30              	100.00%
                    	       		L9L5W2              	26.15%
                    	       		L8XZP2              	23.05%
Bootstrap support for Q759Z6 as seed ortholog is 100%.
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for L9K0M1 as seed ortholog is 100%.
Bootstrap support for L9KS30 as seed ortholog is 100%.

Group of orthologs #138. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 T.chinensis:539

Q74ZK6              	100.00%		L9L9L6              	100.00%
                    	       		L9KHT0              	30.96%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for L9L9L6 as seed ortholog is 100%.

Group of orthologs #139. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:30

Q75F90              	100.00%		L8Y972              	100.00%
Bootstrap support for Q75F90 as seed ortholog is 94%.
Bootstrap support for L8Y972 as seed ortholog is 51%.
Alternative seed ortholog is L9KH27 (30 bits away from this cluster)

Group of orthologs #140. Best score 538 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.chinensis:185

Q753Y4              	100.00%		L9JGU2              	100.00%
Bootstrap support for Q753Y4 as seed ortholog is 99%.
Bootstrap support for L9JGU2 as seed ortholog is 99%.

Group of orthologs #141. Best score 536 bits
Score difference with first non-orthologous sequence - A.gossypii:254 T.chinensis:316

Q754A6              	100.00%		L8XZQ8              	100.00%
Bootstrap support for Q754A6 as seed ortholog is 100%.
Bootstrap support for L8XZQ8 as seed ortholog is 100%.

Group of orthologs #142. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:249 T.chinensis:296

Q757M5              	100.00%		L9JHY4              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 100%.
Bootstrap support for L9JHY4 as seed ortholog is 100%.

Group of orthologs #143. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:532 T.chinensis:532

Q751Y3              	100.00%		L8Y921              	100.00%
                    	       		L9KSZ4              	18.21%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for L8Y921 as seed ortholog is 100%.

Group of orthologs #144. Best score 528 bits
Score difference with first non-orthologous sequence - A.gossypii:528 T.chinensis:322

O60028              	100.00%		L9L3T1              	100.00%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for L9L3T1 as seed ortholog is 100%.

Group of orthologs #145. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:527 T.chinensis:527

Q753S1              	100.00%		L8Y3G2              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for L8Y3G2 as seed ortholog is 100%.

Group of orthologs #146. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:527 T.chinensis:131

Q75E20              	100.00%		L9JDH1              	100.00%
Bootstrap support for Q75E20 as seed ortholog is 100%.
Bootstrap support for L9JDH1 as seed ortholog is 99%.

Group of orthologs #147. Best score 525 bits
Score difference with first non-orthologous sequence - A.gossypii:525 T.chinensis:525

Q758Z0              	100.00%		L8Y8Z3              	100.00%
Bootstrap support for Q758Z0 as seed ortholog is 100%.
Bootstrap support for L8Y8Z3 as seed ortholog is 100%.

Group of orthologs #148. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 T.chinensis:519

Q75BQ6              	100.00%		L8XZA5              	100.00%
Q758F0              	11.32%		L8YFX2              	5.04%
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for L8XZA5 as seed ortholog is 100%.

Group of orthologs #149. Best score 516 bits
Score difference with first non-orthologous sequence - A.gossypii:516 T.chinensis:516

Q757F2              	100.00%		L9LCP6              	100.00%
Q75ET8              	21.88%		L9KJ78              	7.85%
Bootstrap support for Q757F2 as seed ortholog is 100%.
Bootstrap support for L9LCP6 as seed ortholog is 100%.

Group of orthologs #150. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:358 T.chinensis:512

Q758U9              	100.00%		L9L8H1              	100.00%
                    	       		L9JMH0              	55.90%
Bootstrap support for Q758U9 as seed ortholog is 100%.
Bootstrap support for L9L8H1 as seed ortholog is 100%.

Group of orthologs #151. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:512 T.chinensis:512

Q751U1              	100.00%		L9KX71              	100.00%
Bootstrap support for Q751U1 as seed ortholog is 100%.
Bootstrap support for L9KX71 as seed ortholog is 100%.

Group of orthologs #152. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:512 T.chinensis:512

Q75DP6              	100.00%		L9KVG5              	100.00%
Bootstrap support for Q75DP6 as seed ortholog is 100%.
Bootstrap support for L9KVG5 as seed ortholog is 100%.

Group of orthologs #153. Best score 511 bits
Score difference with first non-orthologous sequence - A.gossypii:278 T.chinensis:511

Q74ZE0              	100.00%		L8Y010              	100.00%
Bootstrap support for Q74ZE0 as seed ortholog is 100%.
Bootstrap support for L8Y010 as seed ortholog is 100%.

Group of orthologs #154. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:508 T.chinensis:249

Q754B5              	100.00%		L9KNI8              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for L9KNI8 as seed ortholog is 100%.

Group of orthologs #155. Best score 507 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:322

Q75BL8              	100.00%		L9KR05              	100.00%
                    	       		L9LE99              	62.45%
                    	       		L8Y4Y6              	22.61%
Bootstrap support for Q75BL8 as seed ortholog is 93%.
Bootstrap support for L9KR05 as seed ortholog is 100%.

Group of orthologs #156. Best score 507 bits
Score difference with first non-orthologous sequence - A.gossypii:507 T.chinensis:507

Q752D6              	100.00%		L9LB79              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for L9LB79 as seed ortholog is 100%.

Group of orthologs #157. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:283 T.chinensis:278

Q750T4              	100.00%		L8YBW6              	100.00%
Bootstrap support for Q750T4 as seed ortholog is 100%.
Bootstrap support for L8YBW6 as seed ortholog is 100%.

Group of orthologs #158. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.chinensis:323

Q75C76              	100.00%		L9KN94              	100.00%
Bootstrap support for Q75C76 as seed ortholog is 100%.
Bootstrap support for L9KN94 as seed ortholog is 100%.

Group of orthologs #159. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:502 T.chinensis:502

Q75BD7              	100.00%		L9KYS0              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for L9KYS0 as seed ortholog is 100%.

Group of orthologs #160. Best score 499 bits
Score difference with first non-orthologous sequence - A.gossypii:499 T.chinensis:391

Q75DA4              	100.00%		L9JD11              	100.00%
Bootstrap support for Q75DA4 as seed ortholog is 100%.
Bootstrap support for L9JD11 as seed ortholog is 100%.

Group of orthologs #161. Best score 495 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.chinensis:306

Q75BS4              	100.00%		L9KPW4              	100.00%
Bootstrap support for Q75BS4 as seed ortholog is 100%.
Bootstrap support for L9KPW4 as seed ortholog is 100%.

Group of orthologs #162. Best score 494 bits
Score difference with first non-orthologous sequence - A.gossypii:494 T.chinensis:121

Q75DQ8              	100.00%		L9KNY0              	100.00%
Q75EQ4              	19.27%		
Bootstrap support for Q75DQ8 as seed ortholog is 100%.
Bootstrap support for L9KNY0 as seed ortholog is 85%.

Group of orthologs #163. Best score 494 bits
Score difference with first non-orthologous sequence - A.gossypii:494 T.chinensis:494

Q759A5              	100.00%		L9KZK1              	100.00%
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for L9KZK1 as seed ortholog is 100%.

Group of orthologs #164. Best score 492 bits
Score difference with first non-orthologous sequence - A.gossypii:295 T.chinensis:492

Q74ZH1              	100.00%		L9K688              	100.00%
Bootstrap support for Q74ZH1 as seed ortholog is 100%.
Bootstrap support for L9K688 as seed ortholog is 100%.

Group of orthologs #165. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:490 T.chinensis:490

Q753L7              	100.00%		L9KHC0              	100.00%
Bootstrap support for Q753L7 as seed ortholog is 100%.
Bootstrap support for L9KHC0 as seed ortholog is 100%.

Group of orthologs #166. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:488 T.chinensis:488

Q757Q0              	100.00%		L9KT41              	100.00%
                    	       		L9KSX0              	21.89%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for L9KT41 as seed ortholog is 100%.

Group of orthologs #167. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:488 T.chinensis:403

Q75CD0              	100.00%		L8YAY5              	100.00%
Bootstrap support for Q75CD0 as seed ortholog is 100%.
Bootstrap support for L8YAY5 as seed ortholog is 100%.

Group of orthologs #168. Best score 487 bits
Score difference with first non-orthologous sequence - A.gossypii:362 T.chinensis:487

Q74ZG2              	100.00%		L8Y406              	100.00%
Bootstrap support for Q74ZG2 as seed ortholog is 100%.
Bootstrap support for L8Y406 as seed ortholog is 100%.

Group of orthologs #169. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:486 T.chinensis:486

Q75B31              	100.00%		L8Y0L1              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for L8Y0L1 as seed ortholog is 100%.

Group of orthologs #170. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:484 T.chinensis:366

Q75ED8              	100.00%		L9KZ06              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for L9KZ06 as seed ortholog is 100%.

Group of orthologs #171. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 T.chinensis:483

Q759A9              	100.00%		L9KHM5              	100.00%
                    	       		L8Y869              	27.96%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for L9KHM5 as seed ortholog is 100%.

Group of orthologs #172. Best score 482 bits
Score difference with first non-orthologous sequence - A.gossypii:297 T.chinensis:252

Q74ZJ0              	100.00%		L9JCP6              	100.00%
                    	       		L9KIU1              	27.99%
Bootstrap support for Q74ZJ0 as seed ortholog is 100%.
Bootstrap support for L9JCP6 as seed ortholog is 100%.

Group of orthologs #173. Best score 481 bits
Score difference with first non-orthologous sequence - A.gossypii:267 T.chinensis:264

Q753A5              	100.00%		L9KPH9              	100.00%
Bootstrap support for Q753A5 as seed ortholog is 100%.
Bootstrap support for L9KPH9 as seed ortholog is 100%.

Group of orthologs #174. Best score 479 bits
Score difference with first non-orthologous sequence - A.gossypii:479 T.chinensis:152

Q750R3              	100.00%		L9KTP3              	100.00%
Bootstrap support for Q750R3 as seed ortholog is 100%.
Bootstrap support for L9KTP3 as seed ortholog is 99%.

Group of orthologs #175. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:477 T.chinensis:477

Q757L9              	100.00%		L9KUY5              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for L9KUY5 as seed ortholog is 100%.

Group of orthologs #176. Best score 476 bits
Score difference with first non-orthologous sequence - A.gossypii:476 T.chinensis:320

Q750G1              	100.00%		L8YA02              	100.00%
                    	       		L9JF67              	8.90%
Bootstrap support for Q750G1 as seed ortholog is 100%.
Bootstrap support for L8YA02 as seed ortholog is 100%.

Group of orthologs #177. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:59

Q758W1              	100.00%		L9L452              	100.00%
Q75CG3              	100.00%		L9KUJ3              	100.00%
                    	       		L9L8P4              	40.07%
Bootstrap support for Q758W1 as seed ortholog is 95%.
Bootstrap support for Q75CG3 as seed ortholog is 91%.
Bootstrap support for L9L452 as seed ortholog is 92%.
Bootstrap support for L9KUJ3 as seed ortholog is 84%.

Group of orthologs #178. Best score 474 bits
Score difference with first non-orthologous sequence - A.gossypii:474 T.chinensis:382

Q75C71              	100.00%		L8Y6M2              	100.00%
                    	       		L9KB14              	69.85%
Bootstrap support for Q75C71 as seed ortholog is 100%.
Bootstrap support for L8Y6M2 as seed ortholog is 100%.

Group of orthologs #179. Best score 474 bits
Score difference with first non-orthologous sequence - A.gossypii:383 T.chinensis:430

Q75CR7              	100.00%		L9KLJ6              	100.00%
Bootstrap support for Q75CR7 as seed ortholog is 100%.
Bootstrap support for L9KLJ6 as seed ortholog is 100%.

Group of orthologs #180. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:290 T.chinensis:282

Q74Z73              	100.00%		L8Y5E2              	100.00%
                    	       		L9K179              	6.71%
Bootstrap support for Q74Z73 as seed ortholog is 100%.
Bootstrap support for L8Y5E2 as seed ortholog is 100%.

Group of orthologs #181. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 T.chinensis:473

Q752K1              	100.00%		L9KLG8              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for L9KLG8 as seed ortholog is 100%.

Group of orthologs #182. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 T.chinensis:473

Q751A1              	100.00%		L9KQ61              	100.00%
Bootstrap support for Q751A1 as seed ortholog is 100%.
Bootstrap support for L9KQ61 as seed ortholog is 100%.

Group of orthologs #183. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:157

Q759G0              	100.00%		L8Y3U3              	100.00%
Bootstrap support for Q759G0 as seed ortholog is 100%.
Bootstrap support for L8Y3U3 as seed ortholog is 99%.

Group of orthologs #184. Best score 470 bits
Score difference with first non-orthologous sequence - A.gossypii:470 T.chinensis:470

Q75CB7              	100.00%		L9L3X7              	100.00%
Bootstrap support for Q75CB7 as seed ortholog is 100%.
Bootstrap support for L9L3X7 as seed ortholog is 100%.

Group of orthologs #185. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:469 T.chinensis:469

Q75F64              	100.00%		L9LAE0              	100.00%
                    	       		L9L049              	13.39%
Bootstrap support for Q75F64 as seed ortholog is 100%.
Bootstrap support for L9LAE0 as seed ortholog is 100%.

Group of orthologs #186. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.chinensis:469

Q75EA7              	100.00%		L9L5F0              	100.00%
Bootstrap support for Q75EA7 as seed ortholog is 97%.
Bootstrap support for L9L5F0 as seed ortholog is 100%.

Group of orthologs #187. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 T.chinensis:252

Q753Y9              	100.00%		L8Y527              	100.00%
                    	       		L9KQH8              	44.70%
Bootstrap support for Q753Y9 as seed ortholog is 100%.
Bootstrap support for L8Y527 as seed ortholog is 100%.

Group of orthologs #188. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 T.chinensis:467

Q751I0              	100.00%		L9LDM9              	100.00%
Bootstrap support for Q751I0 as seed ortholog is 100%.
Bootstrap support for L9LDM9 as seed ortholog is 100%.

Group of orthologs #189. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.chinensis:292

Q754N7              	100.00%		L9LFC6              	100.00%
                    	       		L9KTI3              	60.91%
Bootstrap support for Q754N7 as seed ortholog is 100%.
Bootstrap support for L9LFC6 as seed ortholog is 100%.

Group of orthologs #190. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 T.chinensis:465

Q75E56              	100.00%		L9JGV8              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for L9JGV8 as seed ortholog is 100%.

Group of orthologs #191. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 T.chinensis:459

Q75BT4              	100.00%		L9JUN1              	100.00%
                    	       		L9JV65              	26.98%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for L9JUN1 as seed ortholog is 100%.

Group of orthologs #192. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 T.chinensis:459

Q753S4              	100.00%		L8Y7F0              	100.00%
Bootstrap support for Q753S4 as seed ortholog is 100%.
Bootstrap support for L8Y7F0 as seed ortholog is 100%.

Group of orthologs #193. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 T.chinensis:458

Q752Q7              	100.00%		L8YGM9              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 100%.
Bootstrap support for L8YGM9 as seed ortholog is 100%.

Group of orthologs #194. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 T.chinensis:457

Q757G6              	100.00%		L9KTU2              	100.00%
Bootstrap support for Q757G6 as seed ortholog is 100%.
Bootstrap support for L9KTU2 as seed ortholog is 100%.

Group of orthologs #195. Best score 452 bits
Score difference with first non-orthologous sequence - A.gossypii:314 T.chinensis:333

Q74ZS6              	100.00%		L9JD26              	100.00%
                    	       		L9JAW6              	34.46%
                    	       		L9KVC1              	22.07%
                    	       		L9KMT7              	11.96%
Bootstrap support for Q74ZS6 as seed ortholog is 100%.
Bootstrap support for L9JD26 as seed ortholog is 100%.

Group of orthologs #196. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:450 T.chinensis:450

Q755C2              	100.00%		L9KFF6              	100.00%
Bootstrap support for Q755C2 as seed ortholog is 100%.
Bootstrap support for L9KFF6 as seed ortholog is 100%.

Group of orthologs #197. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:449 T.chinensis:449

Q753X7              	100.00%		L9KN50              	100.00%
                    	       		L9KUQ6              	22.54%
                    	       		L9KIB8              	21.11%
Bootstrap support for Q753X7 as seed ortholog is 100%.
Bootstrap support for L9KN50 as seed ortholog is 100%.

Group of orthologs #198. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:346 T.chinensis:348

Q756W4              	100.00%		L9KGV7              	100.00%
Bootstrap support for Q756W4 as seed ortholog is 100%.
Bootstrap support for L9KGV7 as seed ortholog is 100%.

Group of orthologs #199. Best score 447 bits
Score difference with first non-orthologous sequence - A.gossypii:447 T.chinensis:447

Q75D85              	100.00%		L9JEQ8              	100.00%
Bootstrap support for Q75D85 as seed ortholog is 100%.
Bootstrap support for L9JEQ8 as seed ortholog is 100%.

Group of orthologs #200. Best score 446 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.chinensis:134

Q755B6              	100.00%		L9K7H9              	100.00%
Bootstrap support for Q755B6 as seed ortholog is 100%.
Bootstrap support for L9K7H9 as seed ortholog is 99%.

Group of orthologs #201. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.chinensis:221

Q753X2              	100.00%		L9KGE1              	100.00%
                    	       		L9KV04              	65.83%
Bootstrap support for Q753X2 as seed ortholog is 99%.
Bootstrap support for L9KGE1 as seed ortholog is 100%.

Group of orthologs #202. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:98

Q75DK7              	100.00%		L9JP55              	100.00%
Bootstrap support for Q75DK7 as seed ortholog is 96%.
Bootstrap support for L9JP55 as seed ortholog is 99%.

Group of orthologs #203. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:441 T.chinensis:159

Q74ZC0              	100.00%		L9LAU3              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for L9LAU3 as seed ortholog is 99%.

Group of orthologs #204. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 T.chinensis:116

Q751Z2              	100.00%		L9KYR7              	100.00%
Q75C94              	9.34%		
Bootstrap support for Q751Z2 as seed ortholog is 100%.
Bootstrap support for L9KYR7 as seed ortholog is 99%.

Group of orthologs #205. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 T.chinensis:148

Q751B3              	100.00%		L8YCR4              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for L8YCR4 as seed ortholog is 99%.

Group of orthologs #206. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 T.chinensis:440

Q753I4              	100.00%		L9KNH2              	100.00%
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for L9KNH2 as seed ortholog is 100%.

Group of orthologs #207. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:303 T.chinensis:440

Q757U8              	100.00%		L9KL70              	100.00%
Bootstrap support for Q757U8 as seed ortholog is 100%.
Bootstrap support for L9KL70 as seed ortholog is 100%.

Group of orthologs #208. Best score 439 bits
Score difference with first non-orthologous sequence - A.gossypii:320 T.chinensis:322

Q75EZ9              	100.00%		L9L0K7              	100.00%
Bootstrap support for Q75EZ9 as seed ortholog is 100%.
Bootstrap support for L9L0K7 as seed ortholog is 100%.

Group of orthologs #209. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:361 T.chinensis:206

Q74ZV2              	100.00%		L9L9F6              	100.00%
Bootstrap support for Q74ZV2 as seed ortholog is 100%.
Bootstrap support for L9L9F6 as seed ortholog is 99%.

Group of orthologs #210. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 T.chinensis:435

Q757D1              	100.00%		L9LE04              	100.00%
                    	       		L8YE65              	42.00%
Bootstrap support for Q757D1 as seed ortholog is 100%.
Bootstrap support for L9LE04 as seed ortholog is 100%.

Group of orthologs #211. Best score 434 bits
Score difference with first non-orthologous sequence - A.gossypii:434 T.chinensis:434

Q75B86              	100.00%		L9JGU5              	100.00%
Bootstrap support for Q75B86 as seed ortholog is 100%.
Bootstrap support for L9JGU5 as seed ortholog is 100%.

Group of orthologs #212. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:431 T.chinensis:431

Q74ZS1              	100.00%		L9L4I5              	100.00%
                    	       		L9JHM8              	28.38%
Bootstrap support for Q74ZS1 as seed ortholog is 100%.
Bootstrap support for L9L4I5 as seed ortholog is 100%.

Group of orthologs #213. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:431 T.chinensis:431

Q751N9              	100.00%		L9L6H4              	100.00%
                    	       		L9LCS2              	60.50%
Bootstrap support for Q751N9 as seed ortholog is 100%.
Bootstrap support for L9L6H4 as seed ortholog is 100%.

Group of orthologs #214. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:304 T.chinensis:304

Q74ZT2              	100.00%		L8YDR1              	100.00%
Bootstrap support for Q74ZT2 as seed ortholog is 99%.
Bootstrap support for L8YDR1 as seed ortholog is 100%.

Group of orthologs #215. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.chinensis:136

Q75F55              	100.00%		L8Y533              	100.00%
                    	       		L9KJ96              	5.44%
Bootstrap support for Q75F55 as seed ortholog is 100%.
Bootstrap support for L8Y533 as seed ortholog is 99%.

Group of orthologs #216. Best score 429 bits
Score difference with first non-orthologous sequence - A.gossypii:429 T.chinensis:207

Q751N2              	100.00%		L8Y6H6              	100.00%
Bootstrap support for Q751N2 as seed ortholog is 100%.
Bootstrap support for L8Y6H6 as seed ortholog is 100%.

Group of orthologs #217. Best score 429 bits
Score difference with first non-orthologous sequence - A.gossypii:429 T.chinensis:429

Q752R1              	100.00%		L8YCW1              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for L8YCW1 as seed ortholog is 100%.

Group of orthologs #218. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:427 T.chinensis:427

Q757H0              	100.00%		L8Y159              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for L8Y159 as seed ortholog is 100%.

Group of orthologs #219. Best score 422 bits
Score difference with first non-orthologous sequence - A.gossypii:422 T.chinensis:422

Q75F62              	100.00%		L8YFW7              	100.00%
Bootstrap support for Q75F62 as seed ortholog is 100%.
Bootstrap support for L8YFW7 as seed ortholog is 100%.

Group of orthologs #220. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:421 T.chinensis:421

Q75CF3              	100.00%		L8Y3R1              	100.00%
Bootstrap support for Q75CF3 as seed ortholog is 100%.
Bootstrap support for L8Y3R1 as seed ortholog is 100%.

Group of orthologs #221. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:421 T.chinensis:237

Q75A36              	100.00%		L9KQ79              	100.00%
Bootstrap support for Q75A36 as seed ortholog is 100%.
Bootstrap support for L9KQ79 as seed ortholog is 100%.

Group of orthologs #222. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:421 T.chinensis:421

Q758I0              	100.00%		L9KS23              	100.00%
Bootstrap support for Q758I0 as seed ortholog is 100%.
Bootstrap support for L9KS23 as seed ortholog is 100%.

Group of orthologs #223. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:235 T.chinensis:259

Q759V4              	100.00%		L9L5N1              	100.00%
Bootstrap support for Q759V4 as seed ortholog is 99%.
Bootstrap support for L9L5N1 as seed ortholog is 99%.

Group of orthologs #224. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:421 T.chinensis:421

Q75CE5              	100.00%		L9L8S1              	100.00%
Bootstrap support for Q75CE5 as seed ortholog is 100%.
Bootstrap support for L9L8S1 as seed ortholog is 100%.

Group of orthologs #225. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.chinensis:151

Q75B16              	100.00%		L8YFA9              	100.00%
Bootstrap support for Q75B16 as seed ortholog is 99%.
Bootstrap support for L8YFA9 as seed ortholog is 99%.

Group of orthologs #226. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.chinensis:110

Q75AD4              	100.00%		L9KX96              	100.00%
Bootstrap support for Q75AD4 as seed ortholog is 100%.
Bootstrap support for L9KX96 as seed ortholog is 99%.

Group of orthologs #227. Best score 419 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:419

Q757W8              	100.00%		L8YDC6              	100.00%
                    	       		L8Y5M1              	49.67%
                    	       		L9KQ08              	43.90%
Bootstrap support for Q757W8 as seed ortholog is 99%.
Bootstrap support for L8YDC6 as seed ortholog is 100%.

Group of orthologs #228. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 T.chinensis:418

Q756M5              	100.00%		L8Y5A0              	100.00%
Bootstrap support for Q756M5 as seed ortholog is 100%.
Bootstrap support for L8Y5A0 as seed ortholog is 100%.

Group of orthologs #229. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 T.chinensis:418

Q75EP8              	100.00%		L8Y782              	100.00%
Bootstrap support for Q75EP8 as seed ortholog is 100%.
Bootstrap support for L8Y782 as seed ortholog is 100%.

Group of orthologs #230. Best score 417 bits
Score difference with first non-orthologous sequence - A.gossypii:417 T.chinensis:417

Q751L7              	100.00%		L9JED7              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for L9JED7 as seed ortholog is 100%.

Group of orthologs #231. Best score 416 bits
Score difference with first non-orthologous sequence - A.gossypii:2 T.chinensis:82

Q74ZR2              	100.00%		L9KTX8              	100.00%
Bootstrap support for Q74ZR2 as seed ortholog is 52%.
Alternative seed ortholog is Q75A21 (2 bits away from this cluster)
Bootstrap support for L9KTX8 as seed ortholog is 99%.

Group of orthologs #232. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:414 T.chinensis:156

Q74ZX3              	100.00%		L8Y109              	100.00%
Bootstrap support for Q74ZX3 as seed ortholog is 100%.
Bootstrap support for L8Y109 as seed ortholog is 99%.

Group of orthologs #233. Best score 413 bits
Score difference with first non-orthologous sequence - A.gossypii:413 T.chinensis:413

Q75BC3              	100.00%		L8Y8J1              	100.00%
                    	       		L8Y9N6              	32.32%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for L8Y8J1 as seed ortholog is 100%.

Group of orthologs #234. Best score 413 bits
Score difference with first non-orthologous sequence - A.gossypii:30 T.chinensis:297

Q75C31              	100.00%		L9KGX2              	100.00%
                    	       		L9KXK3              	34.94%
Bootstrap support for Q75C31 as seed ortholog is 59%.
Alternative seed ortholog is Q750J2 (30 bits away from this cluster)
Bootstrap support for L9KGX2 as seed ortholog is 100%.

Group of orthologs #235. Best score 413 bits
Score difference with first non-orthologous sequence - A.gossypii:413 T.chinensis:413

Q75DW1              	100.00%		L9KRB9              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 100%.
Bootstrap support for L9KRB9 as seed ortholog is 100%.

Group of orthologs #236. Best score 412 bits
Score difference with first non-orthologous sequence - A.gossypii:412 T.chinensis:412

Q75BS1              	100.00%		L8Y8J9              	100.00%
Bootstrap support for Q75BS1 as seed ortholog is 100%.
Bootstrap support for L8Y8J9 as seed ortholog is 100%.

Group of orthologs #237. Best score 412 bits
Score difference with first non-orthologous sequence - A.gossypii:412 T.chinensis:412

Q75BT9              	100.00%		L9L710              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for L9L710 as seed ortholog is 100%.

Group of orthologs #238. Best score 412 bits
Score difference with first non-orthologous sequence - A.gossypii:412 T.chinensis:412

Q75CF0              	100.00%		L9LA85              	100.00%
Bootstrap support for Q75CF0 as seed ortholog is 100%.
Bootstrap support for L9LA85 as seed ortholog is 100%.

Group of orthologs #239. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:310 T.chinensis:180

Q752Y9              	100.00%		L9JC01              	100.00%
                    	       		L9JBY7              	39.99%
                    	       		L9KHA1              	22.80%
                    	       		L9KGA1              	9.55%
Bootstrap support for Q752Y9 as seed ortholog is 99%.
Bootstrap support for L9JC01 as seed ortholog is 98%.

Group of orthologs #240. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:411 T.chinensis:411

Q75EW4              	100.00%		L8YGL6              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for L8YGL6 as seed ortholog is 100%.

Group of orthologs #241. Best score 410 bits
Score difference with first non-orthologous sequence - A.gossypii:410 T.chinensis:243

Q75BT0              	100.00%		L8Y1V7              	100.00%
                    	       		L9KQM8              	31.69%
                    	       		L9L658              	9.76%
                    	       		L9JAF8              	7.24%
Bootstrap support for Q75BT0 as seed ortholog is 100%.
Bootstrap support for L8Y1V7 as seed ortholog is 99%.

Group of orthologs #242. Best score 409 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:160

Q75C39              	100.00%		L9KJU8              	100.00%
                    	       		L9KJD1              	74.48%
                    	       		L9LC23              	10.42%
Bootstrap support for Q75C39 as seed ortholog is 99%.
Bootstrap support for L9KJU8 as seed ortholog is 100%.

Group of orthologs #243. Best score 408 bits
Score difference with first non-orthologous sequence - A.gossypii:408 T.chinensis:408

Q75E77              	100.00%		L8Y4K5              	100.00%
Bootstrap support for Q75E77 as seed ortholog is 100%.
Bootstrap support for L8Y4K5 as seed ortholog is 100%.

Group of orthologs #244. Best score 408 bits
Score difference with first non-orthologous sequence - A.gossypii:408 T.chinensis:408

Q75DS8              	100.00%		L8Y5K3              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for L8Y5K3 as seed ortholog is 100%.

Group of orthologs #245. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 T.chinensis:191

Q754U8              	100.00%		L8YAN3              	100.00%
Bootstrap support for Q754U8 as seed ortholog is 100%.
Bootstrap support for L8YAN3 as seed ortholog is 99%.

Group of orthologs #246. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:405 T.chinensis:405

Q74ZY9              	100.00%		L8YDN6              	100.00%
                    	       		L8YB70              	33.04%
Bootstrap support for Q74ZY9 as seed ortholog is 100%.
Bootstrap support for L8YDN6 as seed ortholog is 100%.

Group of orthologs #247. Best score 404 bits
Score difference with first non-orthologous sequence - A.gossypii:404 T.chinensis:404

Q756M4              	100.00%		L8Y5S8              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for L8Y5S8 as seed ortholog is 100%.

Group of orthologs #248. Best score 404 bits
Score difference with first non-orthologous sequence - A.gossypii:404 T.chinensis:404

Q75AW5              	100.00%		L9JIC9              	100.00%
Bootstrap support for Q75AW5 as seed ortholog is 100%.
Bootstrap support for L9JIC9 as seed ortholog is 100%.

Group of orthologs #249. Best score 402 bits
Score difference with first non-orthologous sequence - A.gossypii:402 T.chinensis:164

Q752E9              	100.00%		L9KLG3              	100.00%
                    	       		L8Y0B9              	34.09%
                    	       		L8YD71              	24.35%
Bootstrap support for Q752E9 as seed ortholog is 100%.
Bootstrap support for L9KLG3 as seed ortholog is 99%.

Group of orthologs #250. Best score 400 bits
Score difference with first non-orthologous sequence - A.gossypii:400 T.chinensis:400

Q75DC5              	100.00%		L8YBH7              	100.00%
Bootstrap support for Q75DC5 as seed ortholog is 100%.
Bootstrap support for L8YBH7 as seed ortholog is 100%.

Group of orthologs #251. Best score 397 bits
Score difference with first non-orthologous sequence - A.gossypii:397 T.chinensis:117

Q75E73              	100.00%		L8YH91              	100.00%
Bootstrap support for Q75E73 as seed ortholog is 100%.
Bootstrap support for L8YH91 as seed ortholog is 99%.

Group of orthologs #252. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:394 T.chinensis:163

Q75BG3              	100.00%		L9J9C0              	100.00%
                    	       		L8YA18              	58.04%
                    	       		L9KH46              	30.77%
                    	       		L9L5E0              	17.48%
                    	       		L9KGC7              	13.99%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for L9J9C0 as seed ortholog is 100%.

Group of orthologs #253. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:27

Q75A61              	100.00%		L9L0L2              	100.00%
                    	       		L8Y724              	34.16%
Bootstrap support for Q75A61 as seed ortholog is 97%.
Bootstrap support for L9L0L2 as seed ortholog is 81%.

Group of orthologs #254. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:394 T.chinensis:394

Q75F76              	100.00%		L9JHQ8              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for L9JHQ8 as seed ortholog is 100%.

Group of orthologs #255. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:394 T.chinensis:65

Q758H3              	100.00%		L9LBU7              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for L9LBU7 as seed ortholog is 98%.

Group of orthologs #256. Best score 391 bits
Score difference with first non-orthologous sequence - A.gossypii:391 T.chinensis:391

Q757I5              	100.00%		L8Y5A1              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for L8Y5A1 as seed ortholog is 100%.

Group of orthologs #257. Best score 391 bits
Score difference with first non-orthologous sequence - A.gossypii:391 T.chinensis:114

Q754U6              	100.00%		L9K1D1              	100.00%
Bootstrap support for Q754U6 as seed ortholog is 100%.
Bootstrap support for L9K1D1 as seed ortholog is 98%.

Group of orthologs #258. Best score 390 bits
Score difference with first non-orthologous sequence - A.gossypii:390 T.chinensis:390

Q75AZ9              	100.00%		L8Y3Y4              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for L8Y3Y4 as seed ortholog is 100%.

Group of orthologs #259. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 T.chinensis:389

Q75CR3              	100.00%		L8YCW3              	100.00%
Bootstrap support for Q75CR3 as seed ortholog is 100%.
Bootstrap support for L8YCW3 as seed ortholog is 100%.

Group of orthologs #260. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 T.chinensis:226

Q75AP7              	100.00%		L8YGN9              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 100%.
Bootstrap support for L8YGN9 as seed ortholog is 100%.

Group of orthologs #261. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 T.chinensis:296

Q751I9              	100.00%		L9KFV3              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for L9KFV3 as seed ortholog is 100%.

Group of orthologs #262. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:182

Q757B9              	100.00%		L9KT69              	100.00%
Bootstrap support for Q757B9 as seed ortholog is 98%.
Bootstrap support for L9KT69 as seed ortholog is 99%.

Group of orthologs #263. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 T.chinensis:73

Q75BY2              	100.00%		L9KVC3              	100.00%
Bootstrap support for Q75BY2 as seed ortholog is 100%.
Bootstrap support for L9KVC3 as seed ortholog is 68%.
Alternative seed ortholog is L9KYT4 (73 bits away from this cluster)

Group of orthologs #264. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 T.chinensis:388

Q751P6              	100.00%		L9KXU8              	100.00%
Bootstrap support for Q751P6 as seed ortholog is 100%.
Bootstrap support for L9KXU8 as seed ortholog is 100%.

Group of orthologs #265. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 T.chinensis:170

Q8J1G4              	100.00%		L9KV66              	100.00%
Bootstrap support for Q8J1G4 as seed ortholog is 100%.
Bootstrap support for L9KV66 as seed ortholog is 99%.

Group of orthologs #266. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 T.chinensis:388

Q75CI3              	100.00%		L9L0A0              	100.00%
Bootstrap support for Q75CI3 as seed ortholog is 100%.
Bootstrap support for L9L0A0 as seed ortholog is 100%.

Group of orthologs #267. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.chinensis:179

Q75F95              	100.00%		L9L9S1              	100.00%
Bootstrap support for Q75F95 as seed ortholog is 99%.
Bootstrap support for L9L9S1 as seed ortholog is 99%.

Group of orthologs #268. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.chinensis:220

Q75EJ6              	100.00%		L9LBM0              	100.00%
Bootstrap support for Q75EJ6 as seed ortholog is 100%.
Bootstrap support for L9LBM0 as seed ortholog is 100%.

Group of orthologs #269. Best score 387 bits
Score difference with first non-orthologous sequence - A.gossypii:387 T.chinensis:387

Q75ED5              	100.00%		L9LBA6              	100.00%
Bootstrap support for Q75ED5 as seed ortholog is 100%.
Bootstrap support for L9LBA6 as seed ortholog is 100%.

Group of orthologs #270. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 T.chinensis:386

Q75BJ2              	100.00%		L9KP38              	100.00%
                    	       		L9JF00              	32.05%
Bootstrap support for Q75BJ2 as seed ortholog is 100%.
Bootstrap support for L9KP38 as seed ortholog is 100%.

Group of orthologs #271. Best score 383 bits
Score difference with first non-orthologous sequence - A.gossypii:383 T.chinensis:269

Q75E89              	100.00%		L9KI62              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for L9KI62 as seed ortholog is 100%.

Group of orthologs #272. Best score 383 bits
Score difference with first non-orthologous sequence - A.gossypii:383 T.chinensis:383

Q75DK8              	100.00%		L9L8K6              	100.00%
Bootstrap support for Q75DK8 as seed ortholog is 100%.
Bootstrap support for L9L8K6 as seed ortholog is 100%.

Group of orthologs #273. Best score 379 bits
Score difference with first non-orthologous sequence - A.gossypii:379 T.chinensis:379

Q75CI4              	100.00%		L9L0M2              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for L9L0M2 as seed ortholog is 100%.

Group of orthologs #274. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:378 T.chinensis:378

Q758F5              	100.00%		L9JCN1              	100.00%
                    	       		L8Y750              	9.42%
Bootstrap support for Q758F5 as seed ortholog is 100%.
Bootstrap support for L9JCN1 as seed ortholog is 100%.

Group of orthologs #275. Best score 376 bits
Score difference with first non-orthologous sequence - A.gossypii:376 T.chinensis:314

Q75A46              	100.00%		L9KXF8              	100.00%
Bootstrap support for Q75A46 as seed ortholog is 100%.
Bootstrap support for L9KXF8 as seed ortholog is 100%.

Group of orthologs #276. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:375 T.chinensis:180

Q758F4              	100.00%		L9KN32              	100.00%
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for L9KN32 as seed ortholog is 100%.

Group of orthologs #277. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:375 T.chinensis:184

Q75AG7              	100.00%		L9LCR6              	100.00%
Bootstrap support for Q75AG7 as seed ortholog is 100%.
Bootstrap support for L9LCR6 as seed ortholog is 99%.

Group of orthologs #278. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:374 T.chinensis:233

Q74ZU5              	100.00%		L9JI19              	100.00%
                    	       		L9KK44              	76.68%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for L9JI19 as seed ortholog is 100%.

Group of orthologs #279. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:374 T.chinensis:374

Q757S3              	100.00%		L8Y5D9              	100.00%
Bootstrap support for Q757S3 as seed ortholog is 100%.
Bootstrap support for L8Y5D9 as seed ortholog is 100%.

Group of orthologs #280. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:374

Q74Z13              	100.00%		L9KTM4              	100.00%
Bootstrap support for Q74Z13 as seed ortholog is 99%.
Bootstrap support for L9KTM4 as seed ortholog is 100%.

Group of orthologs #281. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:374 T.chinensis:374

Q752W7              	100.00%		L9KXY5              	100.00%
Bootstrap support for Q752W7 as seed ortholog is 100%.
Bootstrap support for L9KXY5 as seed ortholog is 100%.

Group of orthologs #282. Best score 372 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.chinensis:372

Q750E3              	100.00%		L8Y230              	100.00%
Bootstrap support for Q750E3 as seed ortholog is 100%.
Bootstrap support for L8Y230 as seed ortholog is 100%.

Group of orthologs #283. Best score 368 bits
Score difference with first non-orthologous sequence - A.gossypii:368 T.chinensis:368

Q752V5              	100.00%		L9LAY2              	100.00%
Bootstrap support for Q752V5 as seed ortholog is 100%.
Bootstrap support for L9LAY2 as seed ortholog is 100%.

Group of orthologs #284. Best score 367 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.chinensis:367

Q755L3              	100.00%		L8YGT6              	100.00%
Bootstrap support for Q755L3 as seed ortholog is 100%.
Bootstrap support for L8YGT6 as seed ortholog is 100%.

Group of orthologs #285. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 T.chinensis:366

Q755K9              	100.00%		L9L3L3              	100.00%
                    	       		L9L2U4              	32.13%
                    	       		L9LAX0              	17.04%
Bootstrap support for Q755K9 as seed ortholog is 100%.
Bootstrap support for L9L3L3 as seed ortholog is 100%.

Group of orthologs #286. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 T.chinensis:366

Q750I3              	100.00%		L8YG79              	100.00%
Bootstrap support for Q750I3 as seed ortholog is 100%.
Bootstrap support for L8YG79 as seed ortholog is 100%.

Group of orthologs #287. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:365 T.chinensis:221

Q756B9              	100.00%		L9KRM6              	100.00%
                    	       		L8Y8X7              	23.06%
Bootstrap support for Q756B9 as seed ortholog is 100%.
Bootstrap support for L9KRM6 as seed ortholog is 99%.

Group of orthologs #288. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:1 T.chinensis:161

Q757T3              	100.00%		L9L984              	100.00%
                    	       		L8YDS8              	37.33%
Bootstrap support for Q757T3 as seed ortholog is 52%.
Alternative seed ortholog is Q751T7 (1 bits away from this cluster)
Bootstrap support for L9L984 as seed ortholog is 99%.

Group of orthologs #289. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.chinensis:200

Q759M3              	100.00%		L8Y5W8              	100.00%
Bootstrap support for Q759M3 as seed ortholog is 99%.
Bootstrap support for L8Y5W8 as seed ortholog is 100%.

Group of orthologs #290. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:364 T.chinensis:364

Q756Z1              	100.00%		L9L3Q0              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 100%.
Bootstrap support for L9L3Q0 as seed ortholog is 100%.

Group of orthologs #291. Best score 363 bits
Score difference with first non-orthologous sequence - A.gossypii:363 T.chinensis:363

Q757S7              	100.00%		L8Y812              	100.00%
Bootstrap support for Q757S7 as seed ortholog is 100%.
Bootstrap support for L8Y812 as seed ortholog is 100%.

Group of orthologs #292. Best score 363 bits
Score difference with first non-orthologous sequence - A.gossypii:363 T.chinensis:363

Q75AE7              	100.00%		L9L3F8              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for L9L3F8 as seed ortholog is 100%.

Group of orthologs #293. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:362 T.chinensis:199

Q752H0              	100.00%		L8YF67              	100.00%
Bootstrap support for Q752H0 as seed ortholog is 100%.
Bootstrap support for L8YF67 as seed ortholog is 99%.

Group of orthologs #294. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.chinensis:263

Q74ZA9              	100.00%		L9KWZ1              	100.00%
Bootstrap support for Q74ZA9 as seed ortholog is 100%.
Bootstrap support for L9KWZ1 as seed ortholog is 100%.

Group of orthologs #295. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:360 T.chinensis:360

Q756G8              	100.00%		L9J8P4              	100.00%
Bootstrap support for Q756G8 as seed ortholog is 100%.
Bootstrap support for L9J8P4 as seed ortholog is 100%.

Group of orthologs #296. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 T.chinensis:359

Q752A9              	100.00%		L8Y8Q0              	100.00%
Bootstrap support for Q752A9 as seed ortholog is 100%.
Bootstrap support for L8Y8Q0 as seed ortholog is 100%.

Group of orthologs #297. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 T.chinensis:359

Q75DB4              	100.00%		L9KTG3              	100.00%
Bootstrap support for Q75DB4 as seed ortholog is 100%.
Bootstrap support for L9KTG3 as seed ortholog is 100%.

Group of orthologs #298. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 T.chinensis:359

Q750E0              	100.00%		L9LA50              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for L9LA50 as seed ortholog is 100%.

Group of orthologs #299. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 T.chinensis:310

Q75CI8              	100.00%		L9KN75              	100.00%
                    	       		L9JCL0              	64.78%
Bootstrap support for Q75CI8 as seed ortholog is 100%.
Bootstrap support for L9KN75 as seed ortholog is 100%.

Group of orthologs #300. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 T.chinensis:358

Q753E5              	100.00%		L9K2R3              	100.00%
Bootstrap support for Q753E5 as seed ortholog is 100%.
Bootstrap support for L9K2R3 as seed ortholog is 100%.

Group of orthologs #301. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.chinensis:358

Q75BI1              	100.00%		L9JKZ8              	100.00%
Bootstrap support for Q75BI1 as seed ortholog is 99%.
Bootstrap support for L9JKZ8 as seed ortholog is 100%.

Group of orthologs #302. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 T.chinensis:358

Q75F11              	100.00%		L9JGL2              	100.00%
Bootstrap support for Q75F11 as seed ortholog is 100%.
Bootstrap support for L9JGL2 as seed ortholog is 100%.

Group of orthologs #303. Best score 357 bits
Score difference with first non-orthologous sequence - A.gossypii:357 T.chinensis:137

Q759V7              	100.00%		L9KN90              	100.00%
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for L9KN90 as seed ortholog is 99%.

Group of orthologs #304. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.chinensis:146

Q75EW9              	100.00%		L8YDI7              	100.00%
Bootstrap support for Q75EW9 as seed ortholog is 100%.
Bootstrap support for L8YDI7 as seed ortholog is 99%.

Group of orthologs #305. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 T.chinensis:195

Q750Q5              	100.00%		L9L2T4              	100.00%
Bootstrap support for Q750Q5 as seed ortholog is 100%.
Bootstrap support for L9L2T4 as seed ortholog is 99%.

Group of orthologs #306. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 T.chinensis:354

Q759H2              	100.00%		L9KU93              	100.00%
Bootstrap support for Q759H2 as seed ortholog is 100%.
Bootstrap support for L9KU93 as seed ortholog is 100%.

Group of orthologs #307. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:352 T.chinensis:146

Q75F49              	100.00%		L9K4S3              	100.00%
Bootstrap support for Q75F49 as seed ortholog is 100%.
Bootstrap support for L9K4S3 as seed ortholog is 99%.

Group of orthologs #308. Best score 351 bits
Score difference with first non-orthologous sequence - A.gossypii:351 T.chinensis:281

Q74ZL8              	100.00%		L9KYC9              	100.00%
Bootstrap support for Q74ZL8 as seed ortholog is 100%.
Bootstrap support for L9KYC9 as seed ortholog is 100%.

Group of orthologs #309. Best score 350 bits
Score difference with first non-orthologous sequence - A.gossypii:350 T.chinensis:350

Q755M0              	100.00%		L9L508              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for L9L508 as seed ortholog is 100%.

Group of orthologs #310. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:349 T.chinensis:185

Q75A43              	100.00%		L9JXP9              	100.00%
                    	       		L9JXA7              	67.70%
Bootstrap support for Q75A43 as seed ortholog is 100%.
Bootstrap support for L9JXP9 as seed ortholog is 99%.

Group of orthologs #311. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.chinensis:171

Q753W1              	100.00%		L9JG92              	100.00%
Bootstrap support for Q753W1 as seed ortholog is 99%.
Bootstrap support for L9JG92 as seed ortholog is 99%.

Group of orthologs #312. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.chinensis:155

Q75B34              	100.00%		L9L6I3              	100.00%
                    	       		L9KHI4              	45.36%
                    	       		L9L6G1              	38.14%
                    	       		L9JKR5              	22.47%
                    	       		L9JJT1              	17.73%
                    	       		L9KMA4              	5.15%
Bootstrap support for Q75B34 as seed ortholog is 99%.
Bootstrap support for L9L6I3 as seed ortholog is 100%.

Group of orthologs #313. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:127

Q755B5              	100.00%		L9KRH7              	100.00%
Q758E1              	46.72%		L8YD34              	32.07%
Bootstrap support for Q755B5 as seed ortholog is 99%.
Bootstrap support for L9KRH7 as seed ortholog is 99%.

Group of orthologs #314. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:345 T.chinensis:178

Q750F8              	100.00%		L9KRU5              	100.00%
Bootstrap support for Q750F8 as seed ortholog is 100%.
Bootstrap support for L9KRU5 as seed ortholog is 99%.

Group of orthologs #315. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:110

Q752X1              	100.00%		L8Y939              	100.00%
Bootstrap support for Q752X1 as seed ortholog is 98%.
Bootstrap support for L8Y939 as seed ortholog is 99%.

Group of orthologs #316. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:344 T.chinensis:344

Q75A13              	100.00%		L9JE18              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for L9JE18 as seed ortholog is 100%.

Group of orthologs #317. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:170

Q756G5              	100.00%		L9KXD0              	100.00%
Bootstrap support for Q756G5 as seed ortholog is 99%.
Bootstrap support for L9KXD0 as seed ortholog is 99%.

Group of orthologs #318. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.chinensis:342

Q75CB5              	100.00%		L9KUX5              	100.00%
                    	       		L9KGX9              	10.53%
Bootstrap support for Q75CB5 as seed ortholog is 100%.
Bootstrap support for L9KUX5 as seed ortholog is 100%.

Group of orthologs #319. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.chinensis:342

Q75EN8              	100.00%		L9KL11              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for L9KL11 as seed ortholog is 100%.

Group of orthologs #320. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 T.chinensis:342

Q755U7              	100.00%		L9KUP8              	100.00%
Bootstrap support for Q755U7 as seed ortholog is 100%.
Bootstrap support for L9KUP8 as seed ortholog is 100%.

Group of orthologs #321. Best score 340 bits
Score difference with first non-orthologous sequence - A.gossypii:340 T.chinensis:340

Q750Z9              	100.00%		L9JDF5              	100.00%
                    	       		L9L5X7              	23.66%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for L9JDF5 as seed ortholog is 100%.

Group of orthologs #322. Best score 340 bits
Score difference with first non-orthologous sequence - A.gossypii:202 T.chinensis:340

Q758T9              	100.00%		L9KK30              	100.00%
Bootstrap support for Q758T9 as seed ortholog is 99%.
Bootstrap support for L9KK30 as seed ortholog is 100%.

Group of orthologs #323. Best score 339 bits
Score difference with first non-orthologous sequence - A.gossypii:339 T.chinensis:339

Q759G5              	100.00%		L8Y7A4              	100.00%
                    	       		L9JC57              	32.05%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for L8Y7A4 as seed ortholog is 100%.

Group of orthologs #324. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.chinensis:338

Q754D6              	100.00%		L9KSF1              	100.00%
                    	       		L9L4E4              	81.85%
Bootstrap support for Q754D6 as seed ortholog is 100%.
Bootstrap support for L9KSF1 as seed ortholog is 100%.

Group of orthologs #325. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.chinensis:218

Q75AM5              	100.00%		L9KTF8              	100.00%
Bootstrap support for Q75AM5 as seed ortholog is 99%.
Bootstrap support for L9KTF8 as seed ortholog is 99%.

Group of orthologs #326. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:338 T.chinensis:338

Q75CQ6              	100.00%		L9KRF8              	100.00%
Bootstrap support for Q75CQ6 as seed ortholog is 100%.
Bootstrap support for L9KRF8 as seed ortholog is 100%.

Group of orthologs #327. Best score 337 bits
Score difference with first non-orthologous sequence - A.gossypii:337 T.chinensis:337

Q759J7              	100.00%		L9KGI2              	100.00%
Bootstrap support for Q759J7 as seed ortholog is 100%.
Bootstrap support for L9KGI2 as seed ortholog is 100%.

Group of orthologs #328. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 T.chinensis:147

Q753L0              	100.00%		L8Y2D3              	100.00%
Bootstrap support for Q753L0 as seed ortholog is 100%.
Bootstrap support for L8Y2D3 as seed ortholog is 99%.

Group of orthologs #329. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 T.chinensis:336

Q756Z5              	100.00%		L8YA19              	100.00%
Bootstrap support for Q756Z5 as seed ortholog is 100%.
Bootstrap support for L8YA19 as seed ortholog is 100%.

Group of orthologs #330. Best score 335 bits
Score difference with first non-orthologous sequence - A.gossypii:335 T.chinensis:335

Q754K1              	100.00%		L9KDX4              	100.00%
                    	       		L9KME0              	18.58%
Bootstrap support for Q754K1 as seed ortholog is 100%.
Bootstrap support for L9KDX4 as seed ortholog is 100%.

Group of orthologs #331. Best score 335 bits
Score difference with first non-orthologous sequence - A.gossypii:335 T.chinensis:335

Q758V2              	100.00%		L9KYN0              	100.00%
Bootstrap support for Q758V2 as seed ortholog is 100%.
Bootstrap support for L9KYN0 as seed ortholog is 100%.

Group of orthologs #332. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:334 T.chinensis:334

Q751D8              	100.00%		L9KK69              	100.00%
Bootstrap support for Q751D8 as seed ortholog is 100%.
Bootstrap support for L9KK69 as seed ortholog is 100%.

Group of orthologs #333. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:332 T.chinensis:332

Q75CU7              	100.00%		L9KM63              	100.00%
                    	       		L9L6E7              	41.45%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for L9KM63 as seed ortholog is 100%.

Group of orthologs #334. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:208

Q75AZ3              	100.00%		L8YEI5              	100.00%
Bootstrap support for Q75AZ3 as seed ortholog is 99%.
Bootstrap support for L8YEI5 as seed ortholog is 100%.

Group of orthologs #335. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:332 T.chinensis:332

Q75BY4              	100.00%		L9KS27              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for L9KS27 as seed ortholog is 100%.

Group of orthologs #336. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:331 T.chinensis:130

Q74Z89              	100.00%		L9KRX8              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 100%.
Bootstrap support for L9KRX8 as seed ortholog is 100%.

Group of orthologs #337. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:331 T.chinensis:331

Q756Y6              	100.00%		L9LC17              	100.00%
Bootstrap support for Q756Y6 as seed ortholog is 100%.
Bootstrap support for L9LC17 as seed ortholog is 100%.

Group of orthologs #338. Best score 330 bits
Score difference with first non-orthologous sequence - A.gossypii:330 T.chinensis:18

Q74ZU1              	100.00%		L8Y831              	100.00%
                    	       		L9JG03              	15.08%
Bootstrap support for Q74ZU1 as seed ortholog is 100%.
Bootstrap support for L8Y831 as seed ortholog is 76%.

Group of orthologs #339. Best score 330 bits
Score difference with first non-orthologous sequence - A.gossypii:330 T.chinensis:330

Q75CI2              	100.00%		L9L7G3              	100.00%
Bootstrap support for Q75CI2 as seed ortholog is 100%.
Bootstrap support for L9L7G3 as seed ortholog is 100%.

Group of orthologs #340. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:329 T.chinensis:329

Q750Z7              	100.00%		L9KHH3              	100.00%
Bootstrap support for Q750Z7 as seed ortholog is 100%.
Bootstrap support for L9KHH3 as seed ortholog is 100%.

Group of orthologs #341. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:329 T.chinensis:329

Q758F8              	100.00%		L9KN08              	100.00%
Bootstrap support for Q758F8 as seed ortholog is 100%.
Bootstrap support for L9KN08 as seed ortholog is 100%.

Group of orthologs #342. Best score 328 bits
Score difference with first non-orthologous sequence - A.gossypii:328 T.chinensis:153

Q75CG9              	100.00%		L9JGR9              	100.00%
                    	       		L9KN27              	85.85%
                    	       		L9L4P9              	75.12%
                    	       		L9JFX0              	40.49%
                    	       		L9L6P6              	36.59%
                    	       		L9L2M7              	33.17%
                    	       		L9KPL4              	11.22%
Bootstrap support for Q75CG9 as seed ortholog is 100%.
Bootstrap support for L9JGR9 as seed ortholog is 100%.

Group of orthologs #343. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 T.chinensis:327

Q757Y2              	100.00%		L9KIW6              	100.00%
Bootstrap support for Q757Y2 as seed ortholog is 100%.
Bootstrap support for L9KIW6 as seed ortholog is 100%.

Group of orthologs #344. Best score 325 bits
Score difference with first non-orthologous sequence - A.gossypii:325 T.chinensis:325

Q757C6              	100.00%		L9LAD8              	100.00%
                    	       		L9L0X2              	13.80%
                    	       		L9JHQ4              	8.88%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for L9LAD8 as seed ortholog is 100%.

Group of orthologs #345. Best score 325 bits
Score difference with first non-orthologous sequence - A.gossypii:325 T.chinensis:325

Q75CL7              	100.00%		L8Y559              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for L8Y559 as seed ortholog is 100%.

Group of orthologs #346. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 T.chinensis:324

Q751B0              	100.00%		L8Y0Z5              	100.00%
Bootstrap support for Q751B0 as seed ortholog is 100%.
Bootstrap support for L8Y0Z5 as seed ortholog is 100%.

Group of orthologs #347. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 T.chinensis:324

Q75F61              	100.00%		L9KJ13              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 100%.
Bootstrap support for L9KJ13 as seed ortholog is 100%.

Group of orthologs #348. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:49

Q9HF56              	100.00%		L9L1A8              	100.00%
                    	       		L9KS26              	8.96%
Bootstrap support for Q9HF56 as seed ortholog is 100%.
Bootstrap support for L9L1A8 as seed ortholog is 99%.

Group of orthologs #349. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:323 T.chinensis:323

Q75B54              	100.00%		L8YCF5              	100.00%
Bootstrap support for Q75B54 as seed ortholog is 100%.
Bootstrap support for L8YCF5 as seed ortholog is 100%.

Group of orthologs #350. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.chinensis:47

Q759W9              	100.00%		L9KVY5              	100.00%
                    	       		L9KFW2              	57.69%
                    	       		L9KRK4              	48.21%
                    	       		L9KGE2              	46.41%
                    	       		L9JKF7              	41.79%
                    	       		L9KYE0              	26.67%
Bootstrap support for Q759W9 as seed ortholog is 89%.
Bootstrap support for L9KVY5 as seed ortholog is 99%.

Group of orthologs #351. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:82

Q754Q3              	100.00%		L9KUJ4              	100.00%
Q75CV7              	15.72%		
Bootstrap support for Q754Q3 as seed ortholog is 99%.
Bootstrap support for L9KUJ4 as seed ortholog is 99%.

Group of orthologs #352. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 T.chinensis:321

Q756Z9              	100.00%		L8YAX3              	100.00%
                    	       		L8Y3B3              	58.07%
                    	       		L9KMV9              	53.26%
                    	       		L9KV80              	48.45%
                    	       		L9L4F1              	11.49%
Bootstrap support for Q756Z9 as seed ortholog is 100%.
Bootstrap support for L8YAX3 as seed ortholog is 100%.

Group of orthologs #353. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 T.chinensis:321

Q750C5              	100.00%		L8YEM3              	100.00%
Bootstrap support for Q750C5 as seed ortholog is 100%.
Bootstrap support for L8YEM3 as seed ortholog is 100%.

Group of orthologs #354. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 T.chinensis:321

Q74ZC7              	100.00%		L9LCN3              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for L9LCN3 as seed ortholog is 100%.

Group of orthologs #355. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 T.chinensis:86

Q75BF4              	100.00%		L9L5U6              	100.00%
Bootstrap support for Q75BF4 as seed ortholog is 100%.
Bootstrap support for L9L5U6 as seed ortholog is 95%.

Group of orthologs #356. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.chinensis:97

Q750A9              	100.00%		L9KT81              	100.00%
                    	       		L9KUI6              	6.67%
Bootstrap support for Q750A9 as seed ortholog is 99%.
Bootstrap support for L9KT81 as seed ortholog is 99%.

Group of orthologs #357. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:320 T.chinensis:320

Q74ZF8              	100.00%		L9JGE2              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for L9JGE2 as seed ortholog is 100%.

Group of orthologs #358. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:258 T.chinensis:113

Q758J2              	100.00%		L9KYH0              	100.00%
                    	       		L9JWD5              	29.69%
Bootstrap support for Q758J2 as seed ortholog is 100%.
Bootstrap support for L9KYH0 as seed ortholog is 99%.

Group of orthologs #359. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 T.chinensis:319

Q755A1              	100.00%		L8Y2J7              	100.00%
Bootstrap support for Q755A1 as seed ortholog is 100%.
Bootstrap support for L8Y2J7 as seed ortholog is 100%.

Group of orthologs #360. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:318 T.chinensis:318

Q755P1              	100.00%		L9K092              	100.00%
Q75AB9              	8.74%		L9KGN0              	9.44%
Bootstrap support for Q755P1 as seed ortholog is 100%.
Bootstrap support for L9K092 as seed ortholog is 100%.

Group of orthologs #361. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 T.chinensis:317

Q758R9              	100.00%		L8YAK8              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for L8YAK8 as seed ortholog is 100%.

Group of orthologs #362. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 T.chinensis:317

Q750R4              	100.00%		L9KK82              	100.00%
Bootstrap support for Q750R4 as seed ortholog is 100%.
Bootstrap support for L9KK82 as seed ortholog is 100%.

Group of orthologs #363. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 T.chinensis:315

Q75A55              	100.00%		L9KKP0              	100.00%
                    	       		L9L3D0              	40.28%
Bootstrap support for Q75A55 as seed ortholog is 100%.
Bootstrap support for L9KKP0 as seed ortholog is 100%.

Group of orthologs #364. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 T.chinensis:315

Q75EK2              	100.00%		L9JAV6              	100.00%
Bootstrap support for Q75EK2 as seed ortholog is 100%.
Bootstrap support for L9JAV6 as seed ortholog is 100%.

Group of orthologs #365. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 T.chinensis:314

Q75DZ9              	100.00%		L8Y7V8              	100.00%
                    	       		L9LAF0              	29.99%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for L8Y7V8 as seed ortholog is 100%.

Group of orthologs #366. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 T.chinensis:314

Q752D9              	100.00%		L8Y591              	100.00%
Bootstrap support for Q752D9 as seed ortholog is 100%.
Bootstrap support for L8Y591 as seed ortholog is 100%.

Group of orthologs #367. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 T.chinensis:314

Q758K7              	100.00%		L9L016              	100.00%
Bootstrap support for Q758K7 as seed ortholog is 100%.
Bootstrap support for L9L016 as seed ortholog is 100%.

Group of orthologs #368. Best score 313 bits
Score difference with first non-orthologous sequence - A.gossypii:313 T.chinensis:313

Q74ZS2              	100.00%		L9L520              	100.00%
Bootstrap support for Q74ZS2 as seed ortholog is 100%.
Bootstrap support for L9L520 as seed ortholog is 100%.

Group of orthologs #369. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 T.chinensis:311

Q75AB5              	100.00%		L8YE03              	100.00%
Bootstrap support for Q75AB5 as seed ortholog is 100%.
Bootstrap support for L8YE03 as seed ortholog is 100%.

Group of orthologs #370. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 T.chinensis:228

Q75F44              	100.00%		L9JJ34              	100.00%
Bootstrap support for Q75F44 as seed ortholog is 100%.
Bootstrap support for L9JJ34 as seed ortholog is 100%.

Group of orthologs #371. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 T.chinensis:311

Q754Z6              	100.00%		L9KL60              	100.00%
Bootstrap support for Q754Z6 as seed ortholog is 100%.
Bootstrap support for L9KL60 as seed ortholog is 100%.

Group of orthologs #372. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 T.chinensis:101

Q753V8              	100.00%		L8Y0W1              	100.00%
                    	       		L9L6K3              	26.67%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for L8Y0W1 as seed ortholog is 100%.

Group of orthologs #373. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 T.chinensis:310

Q756X5              	100.00%		L8Y5J3              	100.00%
Bootstrap support for Q756X5 as seed ortholog is 100%.
Bootstrap support for L8Y5J3 as seed ortholog is 100%.

Group of orthologs #374. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 T.chinensis:136

Q75C13              	100.00%		L9LC31              	100.00%
                    	       		L9LD36              	90.51%
                    	       		L9KIX8              	64.07%
                    	       		L9KXY7              	60.68%
                    	       		L9KWW8              	49.49%
                    	       		L9L476              	28.81%
                    	       		L9KKS6              	25.42%
                    	       		L9K2D7              	21.02%
                    	       		L9KQC7              	21.02%
                    	       		L9KLT5              	20.34%
                    	       		L9L6E9              	12.54%
                    	       		L9KLA4              	9.15%
                    	       		L9KXA4              	5.76%
                    	       		L9KZ79              	5.42%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for L9LC31 as seed ortholog is 100%.

Group of orthologs #375. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.chinensis:309

Q75BI3              	100.00%		L9KMG3              	100.00%
                    	       		L9KWK1              	26.50%
Bootstrap support for Q75BI3 as seed ortholog is 99%.
Bootstrap support for L9KMG3 as seed ortholog is 100%.

Group of orthologs #376. Best score 308 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.chinensis:308

Q754X6              	100.00%		L9KYS2              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 99%.
Bootstrap support for L9KYS2 as seed ortholog is 100%.

Group of orthologs #377. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 T.chinensis:307

Q75A30              	100.00%		L9KLQ5              	100.00%
                    	       		L9JG60              	26.91%
Bootstrap support for Q75A30 as seed ortholog is 100%.
Bootstrap support for L9KLQ5 as seed ortholog is 100%.

Group of orthologs #378. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 T.chinensis:307

Q756J5              	100.00%		L9L4S3              	100.00%
Bootstrap support for Q756J5 as seed ortholog is 100%.
Bootstrap support for L9L4S3 as seed ortholog is 100%.

Group of orthologs #379. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:306 T.chinensis:306

Q756S9              	100.00%		L9KMJ0              	100.00%
Bootstrap support for Q756S9 as seed ortholog is 100%.
Bootstrap support for L9KMJ0 as seed ortholog is 100%.

Group of orthologs #380. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 T.chinensis:305

Q751T0              	100.00%		L9L7A3              	100.00%
Bootstrap support for Q751T0 as seed ortholog is 100%.
Bootstrap support for L9L7A3 as seed ortholog is 100%.

Group of orthologs #381. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.chinensis:305

Q757G9              	100.00%		L9LBG3              	100.00%
Bootstrap support for Q757G9 as seed ortholog is 100%.
Bootstrap support for L9LBG3 as seed ortholog is 100%.

Group of orthologs #382. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 T.chinensis:304

Q74Z01              	100.00%		L8Y045              	100.00%
Q74Z02              	65.36%		
Bootstrap support for Q74Z01 as seed ortholog is 100%.
Bootstrap support for L8Y045 as seed ortholog is 100%.

Group of orthologs #383. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 T.chinensis:304

Q759R5              	100.00%		L8YBH2              	100.00%
Bootstrap support for Q759R5 as seed ortholog is 100%.
Bootstrap support for L8YBH2 as seed ortholog is 100%.

Group of orthologs #384. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 T.chinensis:304

Q75E11              	100.00%		L9LB43              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for L9LB43 as seed ortholog is 100%.

Group of orthologs #385. Best score 303 bits
Score difference with first non-orthologous sequence - A.gossypii:303 T.chinensis:303

Q755D6              	100.00%		L8Y836              	100.00%
Bootstrap support for Q755D6 as seed ortholog is 100%.
Bootstrap support for L8Y836 as seed ortholog is 100%.

Group of orthologs #386. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.chinensis:49

Q751A4              	100.00%		L8Y2C3              	100.00%
Q74Z35              	31.79%		
Bootstrap support for Q751A4 as seed ortholog is 99%.
Bootstrap support for L8Y2C3 as seed ortholog is 99%.

Group of orthologs #387. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 T.chinensis:302

Q752Z5              	100.00%		L8Y5H7              	100.00%
                    	       		L8Y0A3              	37.93%
Bootstrap support for Q752Z5 as seed ortholog is 100%.
Bootstrap support for L8Y5H7 as seed ortholog is 100%.

Group of orthologs #388. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:17

Q75A26              	100.00%		L8Y3M7              	100.00%
Bootstrap support for Q75A26 as seed ortholog is 100%.
Bootstrap support for L8Y3M7 as seed ortholog is 82%.

Group of orthologs #389. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 T.chinensis:302

Q750J7              	100.00%		L9K9C2              	100.00%
Bootstrap support for Q750J7 as seed ortholog is 100%.
Bootstrap support for L9K9C2 as seed ortholog is 100%.

Group of orthologs #390. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.chinensis:40

Q754S8              	100.00%		L9KI14              	100.00%
Bootstrap support for Q754S8 as seed ortholog is 88%.
Bootstrap support for L9KI14 as seed ortholog is 89%.

Group of orthologs #391. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 T.chinensis:302

Q756U4              	100.00%		L9L0B0              	100.00%
Bootstrap support for Q756U4 as seed ortholog is 100%.
Bootstrap support for L9L0B0 as seed ortholog is 100%.

Group of orthologs #392. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:300 T.chinensis:300

Q75E53              	100.00%		L8YFT1              	100.00%
Bootstrap support for Q75E53 as seed ortholog is 100%.
Bootstrap support for L8YFT1 as seed ortholog is 100%.

Group of orthologs #393. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:300 T.chinensis:300

Q754W1              	100.00%		L9KUB1              	100.00%
Bootstrap support for Q754W1 as seed ortholog is 100%.
Bootstrap support for L9KUB1 as seed ortholog is 100%.

Group of orthologs #394. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 T.chinensis:299

Q753D4              	100.00%		L9KJV2              	100.00%
Bootstrap support for Q753D4 as seed ortholog is 100%.
Bootstrap support for L9KJV2 as seed ortholog is 100%.

Group of orthologs #395. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 T.chinensis:299

Q757X5              	100.00%		L9L9B6              	100.00%
Bootstrap support for Q757X5 as seed ortholog is 100%.
Bootstrap support for L9L9B6 as seed ortholog is 100%.

Group of orthologs #396. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:209 T.chinensis:297

Q75A87              	100.00%		L9KTK6              	100.00%
Bootstrap support for Q75A87 as seed ortholog is 100%.
Bootstrap support for L9KTK6 as seed ortholog is 100%.

Group of orthologs #397. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.chinensis:218

Q75ET3              	100.00%		L9KYM8              	100.00%
Bootstrap support for Q75ET3 as seed ortholog is 100%.
Bootstrap support for L9KYM8 as seed ortholog is 100%.

Group of orthologs #398. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.chinensis:296

Q75C82              	100.00%		L8Y6I7              	100.00%
Bootstrap support for Q75C82 as seed ortholog is 100%.
Bootstrap support for L8Y6I7 as seed ortholog is 100%.

Group of orthologs #399. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 T.chinensis:296

Q756X6              	100.00%		L9J8M8              	100.00%
Bootstrap support for Q756X6 as seed ortholog is 100%.
Bootstrap support for L9J8M8 as seed ortholog is 100%.

Group of orthologs #400. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 T.chinensis:84

Q756R4              	100.00%		L9L556              	100.00%
                    	       		L9KYB8              	66.27%
Bootstrap support for Q756R4 as seed ortholog is 100%.
Bootstrap support for L9L556 as seed ortholog is 94%.

Group of orthologs #401. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:293 T.chinensis:293

Q75AA7              	100.00%		L9J8V9              	100.00%
Bootstrap support for Q75AA7 as seed ortholog is 100%.
Bootstrap support for L9J8V9 as seed ortholog is 100%.

Group of orthologs #402. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:292 T.chinensis:292

Q75CY7              	100.00%		L8Y8T7              	100.00%
                    	       		L8Y2T9              	69.43%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for L8Y8T7 as seed ortholog is 100%.

Group of orthologs #403. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:292 T.chinensis:292

Q75BE8              	100.00%		L9LD03              	100.00%
                    	       		L9J9Z5              	12.90%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for L9LD03 as seed ortholog is 100%.

Group of orthologs #404. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:292 T.chinensis:292

Q758N1              	100.00%		L8Y2P5              	100.00%
Bootstrap support for Q758N1 as seed ortholog is 100%.
Bootstrap support for L8Y2P5 as seed ortholog is 100%.

Group of orthologs #405. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:292 T.chinensis:292

Q759J2              	100.00%		L8YDF6              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for L8YDF6 as seed ortholog is 100%.

Group of orthologs #406. Best score 291 bits
Score difference with first non-orthologous sequence - A.gossypii:291 T.chinensis:291

Q75AX9              	100.00%		L9JBV3              	100.00%
Bootstrap support for Q75AX9 as seed ortholog is 100%.
Bootstrap support for L9JBV3 as seed ortholog is 100%.

Group of orthologs #407. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 T.chinensis:290

Q755Y9              	100.00%		L9JCQ1              	100.00%
                    	       		L9LAE2              	24.53%
Bootstrap support for Q755Y9 as seed ortholog is 100%.
Bootstrap support for L9JCQ1 as seed ortholog is 100%.

Group of orthologs #408. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:117

Q75BF3              	100.00%		L9KFR7              	100.00%
                    	       		L8Y584              	42.86%
Bootstrap support for Q75BF3 as seed ortholog is 90%.
Bootstrap support for L9KFR7 as seed ortholog is 99%.

Group of orthologs #409. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.chinensis:103

Q75D02              	100.00%		L8Y3D9              	100.00%
Bootstrap support for Q75D02 as seed ortholog is 100%.
Bootstrap support for L8Y3D9 as seed ortholog is 100%.

Group of orthologs #410. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 T.chinensis:290

Q75EF0              	100.00%		L8Y4W9              	100.00%
Bootstrap support for Q75EF0 as seed ortholog is 100%.
Bootstrap support for L8Y4W9 as seed ortholog is 100%.

Group of orthologs #411. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 T.chinensis:290

Q75B75              	100.00%		L9JDG1              	100.00%
Bootstrap support for Q75B75 as seed ortholog is 100%.
Bootstrap support for L9JDG1 as seed ortholog is 100%.

Group of orthologs #412. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:164 T.chinensis:289

Q750C1              	100.00%		L8Y7B9              	100.00%
Bootstrap support for Q750C1 as seed ortholog is 100%.
Bootstrap support for L8Y7B9 as seed ortholog is 100%.

Group of orthologs #413. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 T.chinensis:19

Q74ZE6              	100.00%		L9L3B5              	100.00%
Bootstrap support for Q74ZE6 as seed ortholog is 100%.
Bootstrap support for L9L3B5 as seed ortholog is 68%.
Alternative seed ortholog is L9KU26 (19 bits away from this cluster)

Group of orthologs #414. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.chinensis:16

Q754F9              	100.00%		L9L699              	100.00%
                    	       		L8Y8Y3              	59.01%
                    	       		L9KUZ4              	46.83%
Bootstrap support for Q754F9 as seed ortholog is 86%.
Bootstrap support for L9L699 as seed ortholog is 64%.
Alternative seed ortholog is L9KU55 (16 bits away from this cluster)

Group of orthologs #415. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:288 T.chinensis:288

Q752U0              	100.00%		L9KNI4              	100.00%
Bootstrap support for Q752U0 as seed ortholog is 100%.
Bootstrap support for L9KNI4 as seed ortholog is 100%.

Group of orthologs #416. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:288 T.chinensis:232

Q75ER7              	100.00%		L9KKI2              	100.00%
Bootstrap support for Q75ER7 as seed ortholog is 100%.
Bootstrap support for L9KKI2 as seed ortholog is 100%.

Group of orthologs #417. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:288 T.chinensis:238

Q75F99              	100.00%		L9L4R7              	100.00%
Bootstrap support for Q75F99 as seed ortholog is 100%.
Bootstrap support for L9L4R7 as seed ortholog is 100%.

Group of orthologs #418. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:96

Q753G6              	100.00%		L9KQP9              	100.00%
Bootstrap support for Q753G6 as seed ortholog is 99%.
Bootstrap support for L9KQP9 as seed ortholog is 99%.

Group of orthologs #419. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 T.chinensis:287

Q756B7              	100.00%		L9KVI1              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for L9KVI1 as seed ortholog is 100%.

Group of orthologs #420. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 T.chinensis:286

Q754R0              	100.00%		L9JG98              	100.00%
Bootstrap support for Q754R0 as seed ortholog is 100%.
Bootstrap support for L9JG98 as seed ortholog is 100%.

Group of orthologs #421. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 T.chinensis:285

Q74ZH6              	100.00%		L8Y7U5              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for L8Y7U5 as seed ortholog is 100%.

Group of orthologs #422. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:24 T.chinensis:206

Q753J9              	100.00%		L8Y9U3              	100.00%
Bootstrap support for Q753J9 as seed ortholog is 84%.
Bootstrap support for L8Y9U3 as seed ortholog is 100%.

Group of orthologs #423. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 T.chinensis:285

Q755S0              	100.00%		L9L5I5              	100.00%
Bootstrap support for Q755S0 as seed ortholog is 100%.
Bootstrap support for L9L5I5 as seed ortholog is 100%.

Group of orthologs #424. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.chinensis:284

Q75AF7              	100.00%		L8Y790              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 100%.
Bootstrap support for L8Y790 as seed ortholog is 100%.

Group of orthologs #425. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.chinensis:219

Q750E9              	100.00%		L9J9C5              	100.00%
Bootstrap support for Q750E9 as seed ortholog is 100%.
Bootstrap support for L9J9C5 as seed ortholog is 100%.

Group of orthologs #426. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.chinensis:284

Q75E86              	100.00%		L8Y5L3              	100.00%
Bootstrap support for Q75E86 as seed ortholog is 100%.
Bootstrap support for L8Y5L3 as seed ortholog is 100%.

Group of orthologs #427. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:11 T.chinensis:65

Q75BB2              	100.00%		L9KVE0              	100.00%
Bootstrap support for Q75BB2 as seed ortholog is 60%.
Alternative seed ortholog is Q753V5 (11 bits away from this cluster)
Bootstrap support for L9KVE0 as seed ortholog is 90%.

Group of orthologs #428. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 T.chinensis:284

Q758H4              	100.00%		L9L9W4              	100.00%
Bootstrap support for Q758H4 as seed ortholog is 100%.
Bootstrap support for L9L9W4 as seed ortholog is 100%.

Group of orthologs #429. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.chinensis:282

Q757U6              	100.00%		L8YAY1              	100.00%
                    	       		L9L6F6              	33.75%
Bootstrap support for Q757U6 as seed ortholog is 100%.
Bootstrap support for L8YAY1 as seed ortholog is 100%.

Group of orthologs #430. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.chinensis:50

Q00063              	100.00%		L8Y304              	100.00%
Bootstrap support for Q00063 as seed ortholog is 100%.
Bootstrap support for L8Y304 as seed ortholog is 84%.

Group of orthologs #431. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.chinensis:282

Q754S9              	100.00%		L8Y9V9              	100.00%
Bootstrap support for Q754S9 as seed ortholog is 100%.
Bootstrap support for L8Y9V9 as seed ortholog is 100%.

Group of orthologs #432. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:182 T.chinensis:282

Q74ZW3              	100.00%		L9KIG0              	100.00%
Bootstrap support for Q74ZW3 as seed ortholog is 99%.
Bootstrap support for L9KIG0 as seed ortholog is 100%.

Group of orthologs #433. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.chinensis:22

Q756V5              	100.00%		L9K282              	100.00%
Bootstrap support for Q756V5 as seed ortholog is 100%.
Bootstrap support for L9K282 as seed ortholog is 66%.
Alternative seed ortholog is L9J8S9 (22 bits away from this cluster)

Group of orthologs #434. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.chinensis:32

Q75D71              	100.00%		L9KR91              	100.00%
Bootstrap support for Q75D71 as seed ortholog is 100%.
Bootstrap support for L9KR91 as seed ortholog is 72%.
Alternative seed ortholog is L8YD85 (32 bits away from this cluster)

Group of orthologs #435. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 T.chinensis:282

Q750K1              	100.00%		L9LB15              	100.00%
Bootstrap support for Q750K1 as seed ortholog is 100%.
Bootstrap support for L9LB15 as seed ortholog is 100%.

Group of orthologs #436. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 T.chinensis:281

Q75DX3              	100.00%		L8Y8E0              	100.00%
Bootstrap support for Q75DX3 as seed ortholog is 100%.
Bootstrap support for L8Y8E0 as seed ortholog is 100%.

Group of orthologs #437. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:199 T.chinensis:143

Q750S7              	100.00%		L9LAX2              	100.00%
Bootstrap support for Q750S7 as seed ortholog is 100%.
Bootstrap support for L9LAX2 as seed ortholog is 99%.

Group of orthologs #438. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 T.chinensis:126

Q75CI9              	100.00%		L8YE53              	100.00%
                    	       		L9L7B1              	14.74%
Bootstrap support for Q75CI9 as seed ortholog is 100%.
Bootstrap support for L8YE53 as seed ortholog is 99%.

Group of orthologs #439. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 T.chinensis:280

Q74ZQ3              	100.00%		L8Y5Z7              	100.00%
Bootstrap support for Q74ZQ3 as seed ortholog is 100%.
Bootstrap support for L8Y5Z7 as seed ortholog is 100%.

Group of orthologs #440. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.chinensis:279

Q74ZC6              	100.00%		L8Y480              	100.00%
Bootstrap support for Q74ZC6 as seed ortholog is 100%.
Bootstrap support for L8Y480 as seed ortholog is 100%.

Group of orthologs #441. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.chinensis:279

Q75BQ2              	100.00%		L8Y4R4              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for L8Y4R4 as seed ortholog is 100%.

Group of orthologs #442. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.chinensis:279

Q75EB0              	100.00%		L8Y240              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for L8Y240 as seed ortholog is 100%.

Group of orthologs #443. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.chinensis:279

Q758B8              	100.00%		L9KYJ0              	100.00%
Bootstrap support for Q758B8 as seed ortholog is 100%.
Bootstrap support for L9KYJ0 as seed ortholog is 100%.

Group of orthologs #444. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 T.chinensis:279

Q757M8              	100.00%		L9LCX5              	100.00%
Bootstrap support for Q757M8 as seed ortholog is 100%.
Bootstrap support for L9LCX5 as seed ortholog is 100%.

Group of orthologs #445. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:222 T.chinensis:278

Q753K9              	100.00%		L9JEZ0              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 99%.
Bootstrap support for L9JEZ0 as seed ortholog is 100%.

Group of orthologs #446. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.chinensis:76

Q75B10              	100.00%		L9JAW4              	100.00%
                    	       		L9KLA2              	25.20%
Bootstrap support for Q75B10 as seed ortholog is 100%.
Bootstrap support for L9JAW4 as seed ortholog is 93%.

Group of orthologs #447. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.chinensis:277

Q753A2              	100.00%		L8Y3E3              	100.00%
Bootstrap support for Q753A2 as seed ortholog is 100%.
Bootstrap support for L8Y3E3 as seed ortholog is 100%.

Group of orthologs #448. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:277

Q75DV8              	100.00%		L8YCI9              	100.00%
Bootstrap support for Q75DV8 as seed ortholog is 99%.
Bootstrap support for L8YCI9 as seed ortholog is 100%.

Group of orthologs #449. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 T.chinensis:39

Q75CR2              	100.00%		L9L8R8              	100.00%
Bootstrap support for Q75CR2 as seed ortholog is 100%.
Bootstrap support for L9L8R8 as seed ortholog is 73%.
Alternative seed ortholog is L9KHU6 (39 bits away from this cluster)

Group of orthologs #450. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.chinensis:204

Q75C20              	100.00%		L9K1E6              	100.00%
                    	       		L8Y0K2              	58.08%
Bootstrap support for Q75C20 as seed ortholog is 99%.
Bootstrap support for L9K1E6 as seed ortholog is 100%.

Group of orthologs #451. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.chinensis:79

Q758S8              	100.00%		L9L3B2              	100.00%
                    	       		L8Y8L6              	15.44%
Bootstrap support for Q758S8 as seed ortholog is 100%.
Bootstrap support for L9L3B2 as seed ortholog is 99%.

Group of orthologs #452. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.chinensis:276

Q75D52              	100.00%		L8Y5C2              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for L8Y5C2 as seed ortholog is 100%.

Group of orthologs #453. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.chinensis:276

Q755T8              	100.00%		L8YE52              	100.00%
Bootstrap support for Q755T8 as seed ortholog is 99%.
Bootstrap support for L8YE52 as seed ortholog is 100%.

Group of orthologs #454. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.chinensis:276

Q758U0              	100.00%		L9KTM5              	100.00%
Bootstrap support for Q758U0 as seed ortholog is 100%.
Bootstrap support for L9KTM5 as seed ortholog is 100%.

Group of orthologs #455. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.chinensis:276

Q750K5              	100.00%		L9LAA5              	100.00%
Bootstrap support for Q750K5 as seed ortholog is 100%.
Bootstrap support for L9LAA5 as seed ortholog is 100%.

Group of orthologs #456. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 T.chinensis:276

Q758L6              	100.00%		L9L660              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 100%.
Bootstrap support for L9L660 as seed ortholog is 100%.

Group of orthologs #457. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.chinensis:275

Q75DG3              	100.00%		L9KWJ3              	100.00%
Bootstrap support for Q75DG3 as seed ortholog is 100%.
Bootstrap support for L9KWJ3 as seed ortholog is 100%.

Group of orthologs #458. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:275 T.chinensis:92

Q75E90              	100.00%		L9KXC8              	100.00%
Bootstrap support for Q75E90 as seed ortholog is 100%.
Bootstrap support for L9KXC8 as seed ortholog is 99%.

Group of orthologs #459. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.chinensis:79

Q751V1              	100.00%		L9LCR8              	100.00%
Bootstrap support for Q751V1 as seed ortholog is 99%.
Bootstrap support for L9LCR8 as seed ortholog is 99%.

Group of orthologs #460. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 T.chinensis:274

Q75B74              	100.00%		L9J9E0              	100.00%
                    	       		L8YCA9              	66.90%
Bootstrap support for Q75B74 as seed ortholog is 100%.
Bootstrap support for L9J9E0 as seed ortholog is 100%.

Group of orthologs #461. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 T.chinensis:274

Q754I8              	100.00%		L8Y6B7              	100.00%
Bootstrap support for Q754I8 as seed ortholog is 100%.
Bootstrap support for L8Y6B7 as seed ortholog is 100%.

Group of orthologs #462. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:229

Q759N3              	100.00%		L9JA09              	100.00%
Bootstrap support for Q759N3 as seed ortholog is 100%.
Bootstrap support for L9JA09 as seed ortholog is 100%.

Group of orthologs #463. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:179 T.chinensis:274

Q75BY6              	100.00%		L9KGK8              	100.00%
Bootstrap support for Q75BY6 as seed ortholog is 99%.
Bootstrap support for L9KGK8 as seed ortholog is 100%.

Group of orthologs #464. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 T.chinensis:274

Q756H0              	100.00%		L9KRC4              	100.00%
Bootstrap support for Q756H0 as seed ortholog is 100%.
Bootstrap support for L9KRC4 as seed ortholog is 100%.

Group of orthologs #465. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 T.chinensis:273

Q754B9              	100.00%		L9KT25              	100.00%
Bootstrap support for Q754B9 as seed ortholog is 100%.
Bootstrap support for L9KT25 as seed ortholog is 100%.

Group of orthologs #466. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.chinensis:177

Q756E4              	100.00%		L9KKL3              	100.00%
Bootstrap support for Q756E4 as seed ortholog is 100%.
Bootstrap support for L9KKL3 as seed ortholog is 99%.

Group of orthologs #467. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 T.chinensis:272

Q75B12              	100.00%		L9KLB2              	100.00%
Bootstrap support for Q75B12 as seed ortholog is 100%.
Bootstrap support for L9KLB2 as seed ortholog is 100%.

Group of orthologs #468. Best score 271 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.chinensis:271

Q756N5              	100.00%		L8Y8V9              	100.00%
Bootstrap support for Q756N5 as seed ortholog is 99%.
Bootstrap support for L8Y8V9 as seed ortholog is 100%.

Group of orthologs #469. Best score 271 bits
Score difference with first non-orthologous sequence - A.gossypii:271 T.chinensis:38

Q75A24              	100.00%		L9L5G9              	100.00%
Bootstrap support for Q75A24 as seed ortholog is 100%.
Bootstrap support for L9L5G9 as seed ortholog is 86%.

Group of orthologs #470. Best score 271 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:271

Q75EV8              	100.00%		L9LD96              	100.00%
Bootstrap support for Q75EV8 as seed ortholog is 84%.
Bootstrap support for L9LD96 as seed ortholog is 100%.

Group of orthologs #471. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 T.chinensis:270

Q75EB1              	100.00%		L9KQY4              	100.00%
Bootstrap support for Q75EB1 as seed ortholog is 100%.
Bootstrap support for L9KQY4 as seed ortholog is 100%.

Group of orthologs #472. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 T.chinensis:270

Q755D9              	100.00%		L9L3J1              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for L9L3J1 as seed ortholog is 100%.

Group of orthologs #473. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 T.chinensis:269

Q75D59              	100.00%		L9JWZ1              	100.00%
Bootstrap support for Q75D59 as seed ortholog is 100%.
Bootstrap support for L9JWZ1 as seed ortholog is 100%.

Group of orthologs #474. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:87

Q74ZZ9              	100.00%		L9KQS6              	100.00%
                    	       		L9LBJ0              	22.96%
Bootstrap support for Q74ZZ9 as seed ortholog is 99%.
Bootstrap support for L9KQS6 as seed ortholog is 97%.

Group of orthologs #475. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:265

Q75AN1              	100.00%		L9JH05              	100.00%
Q758K6              	9.88%		L9LCV7              	51.32%
Bootstrap support for Q75AN1 as seed ortholog is 99%.
Bootstrap support for L9JH05 as seed ortholog is 100%.

Group of orthologs #476. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 T.chinensis:265

Q75D16              	100.00%		L8Y596              	100.00%
Bootstrap support for Q75D16 as seed ortholog is 100%.
Bootstrap support for L8Y596 as seed ortholog is 100%.

Group of orthologs #477. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 T.chinensis:265

Q75DR9              	100.00%		L8Y7U9              	100.00%
Bootstrap support for Q75DR9 as seed ortholog is 100%.
Bootstrap support for L8Y7U9 as seed ortholog is 100%.

Group of orthologs #478. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 T.chinensis:265

Q755W8              	100.00%		L9J9J2              	100.00%
Bootstrap support for Q755W8 as seed ortholog is 100%.
Bootstrap support for L9J9J2 as seed ortholog is 100%.

Group of orthologs #479. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 T.chinensis:218

Q758D0              	100.00%		L9KRE2              	100.00%
Bootstrap support for Q758D0 as seed ortholog is 100%.
Bootstrap support for L9KRE2 as seed ortholog is 100%.

Group of orthologs #480. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 T.chinensis:265

Q75CN5              	100.00%		L9KPC8              	100.00%
Bootstrap support for Q75CN5 as seed ortholog is 100%.
Bootstrap support for L9KPC8 as seed ortholog is 100%.

Group of orthologs #481. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 T.chinensis:264

Q750Y8              	100.00%		L8Y467              	100.00%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for L8Y467 as seed ortholog is 100%.

Group of orthologs #482. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:202 T.chinensis:264

Q75DR0              	100.00%		L8YAD0              	100.00%
Bootstrap support for Q75DR0 as seed ortholog is 99%.
Bootstrap support for L8YAD0 as seed ortholog is 100%.

Group of orthologs #483. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 T.chinensis:180

Q75D84              	100.00%		L9JLN0              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for L9JLN0 as seed ortholog is 100%.

Group of orthologs #484. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 T.chinensis:264

Q759C8              	100.00%		L9L182              	100.00%
Bootstrap support for Q759C8 as seed ortholog is 100%.
Bootstrap support for L9L182 as seed ortholog is 100%.

Group of orthologs #485. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:263 T.chinensis:191

Q75EG2              	100.00%		L9JD66              	100.00%
                    	       		L9KNK0              	46.39%
                    	       		L9JQK3              	38.14%
Bootstrap support for Q75EG2 as seed ortholog is 100%.
Bootstrap support for L9JD66 as seed ortholog is 100%.

Group of orthologs #486. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:263 T.chinensis:263

Q750G3              	100.00%		L8Y4Y5              	100.00%
Bootstrap support for Q750G3 as seed ortholog is 100%.
Bootstrap support for L8Y4Y5 as seed ortholog is 100%.

Group of orthologs #487. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:263 T.chinensis:263

Q751S5              	100.00%		L9KTZ4              	100.00%
Bootstrap support for Q751S5 as seed ortholog is 100%.
Bootstrap support for L9KTZ4 as seed ortholog is 100%.

Group of orthologs #488. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.chinensis:36

Q75ES8              	100.00%		L9LAY7              	100.00%
Bootstrap support for Q75ES8 as seed ortholog is 94%.
Bootstrap support for L9LAY7 as seed ortholog is 84%.

Group of orthologs #489. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 T.chinensis:260

Q759G6              	100.00%		L9K793              	100.00%
                    	       		L9L2J3              	11.52%
Bootstrap support for Q759G6 as seed ortholog is 100%.
Bootstrap support for L9K793 as seed ortholog is 100%.

Group of orthologs #490. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 T.chinensis:260

Q75D31              	100.00%		L8Y3T1              	100.00%
Bootstrap support for Q75D31 as seed ortholog is 100%.
Bootstrap support for L8Y3T1 as seed ortholog is 100%.

Group of orthologs #491. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.chinensis:260

Q753N3              	100.00%		L8YBQ4              	100.00%
Bootstrap support for Q753N3 as seed ortholog is 100%.
Bootstrap support for L8YBQ4 as seed ortholog is 100%.

Group of orthologs #492. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 T.chinensis:211

Q750F7              	100.00%		L9LEM0              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for L9LEM0 as seed ortholog is 100%.

Group of orthologs #493. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.chinensis:50

Q75D41              	100.00%		L9KRC3              	100.00%
Q9HF54              	35.37%		L8Y3X1              	64.71%
Bootstrap support for Q75D41 as seed ortholog is 99%.
Bootstrap support for L9KRC3 as seed ortholog is 98%.

Group of orthologs #494. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 T.chinensis:259

Q75AJ9              	100.00%		L9KIF7              	100.00%
Bootstrap support for Q75AJ9 as seed ortholog is 100%.
Bootstrap support for L9KIF7 as seed ortholog is 100%.

Group of orthologs #495. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:258 T.chinensis:258

Q758S7              	100.00%		L9L0F2              	100.00%
                    	       		L9KGT6              	17.79%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for L9L0F2 as seed ortholog is 100%.

Group of orthologs #496. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:258 T.chinensis:258

Q751A3              	100.00%		L9KZM3              	100.00%
Bootstrap support for Q751A3 as seed ortholog is 100%.
Bootstrap support for L9KZM3 as seed ortholog is 100%.

Group of orthologs #497. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:84

Q759X8              	100.00%		L9JCX1              	100.00%
                    	       		L9JIR0              	55.98%
                    	       		L8XZ93              	48.94%
Bootstrap support for Q759X8 as seed ortholog is 96%.
Bootstrap support for L9JCX1 as seed ortholog is 97%.

Group of orthologs #498. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:257

Q757V3              	100.00%		L9JC64              	100.00%
Bootstrap support for Q757V3 as seed ortholog is 89%.
Bootstrap support for L9JC64 as seed ortholog is 100%.

Group of orthologs #499. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.chinensis:257

Q75F80              	100.00%		L9JDG0              	100.00%
Bootstrap support for Q75F80 as seed ortholog is 99%.
Bootstrap support for L9JDG0 as seed ortholog is 100%.

Group of orthologs #500. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:1

Q757J8              	100.00%		L9KSF2              	100.00%
                    	       		L9L2L9              	21.13%
                    	       		L9L6N9              	20.75%
Bootstrap support for Q757J8 as seed ortholog is 82%.
Bootstrap support for L9KSF2 as seed ortholog is 55%.
Alternative seed ortholog is L9KX28 (1 bits away from this cluster)

Group of orthologs #501. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 T.chinensis:256

Q754L1              	100.00%		L8YBC2              	100.00%
                    	       		L8YCJ3              	42.75%
Bootstrap support for Q754L1 as seed ortholog is 100%.
Bootstrap support for L8YBC2 as seed ortholog is 100%.

Group of orthologs #502. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 T.chinensis:166

Q75AV4              	100.00%		L9KHK4              	100.00%
Bootstrap support for Q75AV4 as seed ortholog is 100%.
Bootstrap support for L9KHK4 as seed ortholog is 99%.

Group of orthologs #503. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 T.chinensis:256

Q751R5              	100.00%		L9LEA6              	100.00%
Bootstrap support for Q751R5 as seed ortholog is 100%.
Bootstrap support for L9LEA6 as seed ortholog is 100%.

Group of orthologs #504. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.chinensis:170

Q756S0              	100.00%		L8Y6Y3              	100.00%
                    	       		L9J9V0              	82.43%
                    	       		L9KTB9              	76.01%
                    	       		L9KR95              	75.34%
                    	       		L9JGX2              	55.41%
                    	       		L9L0A3              	42.23%
Bootstrap support for Q756S0 as seed ortholog is 99%.
Bootstrap support for L8Y6Y3 as seed ortholog is 100%.

Group of orthologs #505. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 T.chinensis:191

Q75CU3              	100.00%		L8Y2L5              	100.00%
                    	       		L8Y8R3              	35.97%
                    	       		L9J9V9              	15.09%
                    	       		L9KH70              	11.95%
Bootstrap support for Q75CU3 as seed ortholog is 100%.
Bootstrap support for L8Y2L5 as seed ortholog is 100%.

Group of orthologs #506. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 T.chinensis:255

Q757E3              	100.00%		L8Y6Q4              	100.00%
Bootstrap support for Q757E3 as seed ortholog is 100%.
Bootstrap support for L8Y6Q4 as seed ortholog is 100%.

Group of orthologs #507. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.chinensis:84

Q756N0              	100.00%		L9KRX6              	100.00%
Bootstrap support for Q756N0 as seed ortholog is 99%.
Bootstrap support for L9KRX6 as seed ortholog is 93%.

Group of orthologs #508. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 T.chinensis:255

Q756I1              	100.00%		L9KYU1              	100.00%
Bootstrap support for Q756I1 as seed ortholog is 100%.
Bootstrap support for L9KYU1 as seed ortholog is 100%.

Group of orthologs #509. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:254 T.chinensis:254

Q754W9              	100.00%		L8Y3B7              	100.00%
Bootstrap support for Q754W9 as seed ortholog is 100%.
Bootstrap support for L8Y3B7 as seed ortholog is 100%.

Group of orthologs #510. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:254 T.chinensis:254

Q75EY8              	100.00%		L8YES7              	100.00%
Bootstrap support for Q75EY8 as seed ortholog is 100%.
Bootstrap support for L8YES7 as seed ortholog is 100%.

Group of orthologs #511. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:254 T.chinensis:254

Q750X2              	100.00%		L9KQN5              	100.00%
Bootstrap support for Q750X2 as seed ortholog is 100%.
Bootstrap support for L9KQN5 as seed ortholog is 100%.

Group of orthologs #512. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 T.chinensis:48

Q75CQ9              	100.00%		L8YI08              	100.00%
                    	       		L9L382              	54.77%
                    	       		L9LBY7              	42.40%
                    	       		L9L312              	42.05%
                    	       		L9KHN9              	36.75%
                    	       		L9LCV9              	25.09%
                    	       		L9KGJ6              	9.19%
Bootstrap support for Q75CQ9 as seed ortholog is 100%.
Bootstrap support for L8YI08 as seed ortholog is 97%.

Group of orthologs #513. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 T.chinensis:253

Q75EA0              	100.00%		L9L7Z5              	100.00%
                    	       		L8Y3N6              	60.29%
                    	       		L9KZ76              	34.19%
                    	       		L9KG23              	26.47%
                    	       		L9L3Q1              	22.43%
                    	       		L9KLE3              	18.01%
                    	       		L9KN56              	11.76%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for L9L7Z5 as seed ortholog is 100%.

Group of orthologs #514. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 T.chinensis:38

Q756I7              	100.00%		L8YD52              	100.00%
                    	       		L9LAD7              	18.96%
                    	       		L8YA89              	16.90%
Bootstrap support for Q756I7 as seed ortholog is 100%.
Bootstrap support for L8YD52 as seed ortholog is 89%.

Group of orthologs #515. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 T.chinensis:2

Q74ZK4              	100.00%		L9KQG1              	100.00%
                    	       		L8Y775              	19.08%
                    	       		L9LCZ6              	18.42%
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for L9KQG1 as seed ortholog is 47%.
Alternative seed ortholog is L8YAA5 (2 bits away from this cluster)

Group of orthologs #516. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 T.chinensis:253

Q74Z71              	100.00%		L9J9N7              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for L9J9N7 as seed ortholog is 100%.

Group of orthologs #517. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:253

Q74ZN0              	100.00%		L9KPK8              	100.00%
Bootstrap support for Q74ZN0 as seed ortholog is 97%.
Bootstrap support for L9KPK8 as seed ortholog is 100%.

Group of orthologs #518. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.chinensis:135

Q74Z31              	100.00%		L9KHK7              	100.00%
                    	       		L9L2D5              	23.16%
                    	       		L9KJB9              	7.34%
Bootstrap support for Q74Z31 as seed ortholog is 100%.
Bootstrap support for L9KHK7 as seed ortholog is 100%.

Group of orthologs #519. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.chinensis:252

Q751K0              	100.00%		L9JB38              	100.00%
Bootstrap support for Q751K0 as seed ortholog is 100%.
Bootstrap support for L9JB38 as seed ortholog is 100%.

Group of orthologs #520. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.chinensis:252

Q75CK1              	100.00%		L8YDE2              	100.00%
Bootstrap support for Q75CK1 as seed ortholog is 100%.
Bootstrap support for L8YDE2 as seed ortholog is 100%.

Group of orthologs #521. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.chinensis:252

Q757G4              	100.00%		L9KJV5              	100.00%
Bootstrap support for Q757G4 as seed ortholog is 100%.
Bootstrap support for L9KJV5 as seed ortholog is 100%.

Group of orthologs #522. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.chinensis:252

Q75EL3              	100.00%		L9KFU3              	100.00%
Bootstrap support for Q75EL3 as seed ortholog is 100%.
Bootstrap support for L9KFU3 as seed ortholog is 100%.

Group of orthologs #523. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 T.chinensis:252

Q754H4              	100.00%		L9KS72              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for L9KS72 as seed ortholog is 100%.

Group of orthologs #524. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:172

Q75BM2              	100.00%		L9JB26              	100.00%
                    	       		L9KWG5              	56.07%
                    	       		L8XZ22              	13.18%
Bootstrap support for Q75BM2 as seed ortholog is 99%.
Bootstrap support for L9JB26 as seed ortholog is 100%.

Group of orthologs #525. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.chinensis:157

Q750D2              	100.00%		L8Y5V7              	100.00%
                    	       		L8YEE6              	23.44%
Bootstrap support for Q750D2 as seed ortholog is 100%.
Bootstrap support for L8Y5V7 as seed ortholog is 99%.

Group of orthologs #526. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:52

Q75C60              	100.00%		L8Y6A0              	100.00%
                    	       		L9JF16              	22.22%
Bootstrap support for Q75C60 as seed ortholog is 99%.
Bootstrap support for L8Y6A0 as seed ortholog is 96%.

Group of orthologs #527. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.chinensis:101

Q74ZY1              	100.00%		L9KZK7              	100.00%
Bootstrap support for Q74ZY1 as seed ortholog is 99%.
Bootstrap support for L9KZK7 as seed ortholog is 98%.

Group of orthologs #528. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 T.chinensis:251

Q75A89              	100.00%		L9L5B9              	100.00%
Bootstrap support for Q75A89 as seed ortholog is 100%.
Bootstrap support for L9L5B9 as seed ortholog is 100%.

Group of orthologs #529. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.chinensis:250

Q75D88              	100.00%		L9KWI7              	100.00%
                    	       		L9KU44              	10.99%
Bootstrap support for Q75D88 as seed ortholog is 100%.
Bootstrap support for L9KWI7 as seed ortholog is 100%.

Group of orthologs #530. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.chinensis:250

Q759A8              	100.00%		L8Y9C2              	100.00%
Bootstrap support for Q759A8 as seed ortholog is 100%.
Bootstrap support for L8Y9C2 as seed ortholog is 100%.

Group of orthologs #531. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 T.chinensis:250

Q754F1              	100.00%		L9JL07              	100.00%
Bootstrap support for Q754F1 as seed ortholog is 100%.
Bootstrap support for L9JL07 as seed ortholog is 100%.

Group of orthologs #532. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.chinensis:73

Q755A7              	100.00%		L8YGC8              	100.00%
                    	       		L8Y8I2              	77.74%
                    	       		L9L8J4              	71.92%
                    	       		L9L7P8              	70.89%
                    	       		L9JDW4              	65.41%
                    	       		L9KLU5              	57.19%
                    	       		L8Y6R9              	52.74%
                    	       		L9L427              	41.78%
                    	       		L9L7E2              	41.10%
                    	       		L9L4I6              	35.27%
                    	       		L9JDQ4              	34.25%
                    	       		L9KTV5              	32.88%
                    	       		L9JK44              	30.48%
                    	       		L9JZX5              	30.14%
                    	       		L9LBV2              	30.14%
                    	       		L9JBD1              	26.37%
                    	       		L9LCI0              	26.03%
                    	       		L9KS39              	25.00%
                    	       		L9JK42              	23.29%
                    	       		L9KMV0              	23.29%
                    	       		L9KSB8              	23.29%
                    	       		L9L6U1              	22.60%
                    	       		L9KKV9              	21.58%
                    	       		L9LA63              	21.58%
                    	       		L9KNG4              	16.44%
                    	       		L9KHM7              	15.75%
                    	       		L8Y1R7              	15.41%
                    	       		L9KSJ9              	14.04%
                    	       		L9L6Z3              	13.36%
                    	       		L9JP43              	12.33%
                    	       		L9KT50              	11.99%
                    	       		L9LCZ8              	10.96%
                    	       		L9L868              	9.93%
                    	       		L8Y0L8              	9.93%
                    	       		L9KMC3              	8.22%
Bootstrap support for Q755A7 as seed ortholog is 100%.
Bootstrap support for L8YGC8 as seed ortholog is 99%.

Group of orthologs #533. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 T.chinensis:29

Q75C92              	100.00%		L8YI66              	100.00%
                    	       		L9KRS7              	37.94%
                    	       		L9KJQ1              	5.69%
Bootstrap support for Q75C92 as seed ortholog is 100%.
Bootstrap support for L8YI66 as seed ortholog is 69%.
Alternative seed ortholog is L8Y6E3 (29 bits away from this cluster)

Group of orthologs #534. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 T.chinensis:248

Q75CY6              	100.00%		L9KTC5              	100.00%
                    	       		L9LBS3              	5.69%
Bootstrap support for Q75CY6 as seed ortholog is 100%.
Bootstrap support for L9KTC5 as seed ortholog is 100%.

Group of orthologs #535. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 T.chinensis:248

Q75CA4              	100.00%		L9JAZ9              	100.00%
Bootstrap support for Q75CA4 as seed ortholog is 100%.
Bootstrap support for L9JAZ9 as seed ortholog is 100%.

Group of orthologs #536. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:104

Q756F9              	100.00%		L8YDG1              	100.00%
                    	       		L9KGZ2              	48.47%
                    	       		L9KXZ8              	22.70%
Bootstrap support for Q756F9 as seed ortholog is 100%.
Bootstrap support for L8YDG1 as seed ortholog is 100%.

Group of orthologs #537. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:247 T.chinensis:171

Q756J9              	100.00%		L9JHQ6              	100.00%
Bootstrap support for Q756J9 as seed ortholog is 100%.
Bootstrap support for L9JHQ6 as seed ortholog is 99%.

Group of orthologs #538. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.chinensis:246

Q74Z50              	100.00%		L8Y672              	100.00%
                    	       		L9KLB1              	22.79%
                    	       		L8YF52              	14.75%
Bootstrap support for Q74Z50 as seed ortholog is 100%.
Bootstrap support for L8Y672 as seed ortholog is 100%.

Group of orthologs #539. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.chinensis:63

Q75CA9              	100.00%		L8Y5D0              	100.00%
Bootstrap support for Q75CA9 as seed ortholog is 100%.
Bootstrap support for L8Y5D0 as seed ortholog is 99%.

Group of orthologs #540. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 T.chinensis:246

Q75EE9              	100.00%		L9JLP2              	100.00%
Bootstrap support for Q75EE9 as seed ortholog is 100%.
Bootstrap support for L9JLP2 as seed ortholog is 100%.

Group of orthologs #541. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:95

Q755C4              	100.00%		L8Y7P3              	100.00%
                    	       		L9L8H7              	80.97%
Bootstrap support for Q755C4 as seed ortholog is 99%.
Bootstrap support for L8Y7P3 as seed ortholog is 99%.

Group of orthologs #542. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.chinensis:245

Q75A33              	100.00%		L8YEA8              	100.00%
Bootstrap support for Q75A33 as seed ortholog is 99%.
Bootstrap support for L8YEA8 as seed ortholog is 100%.

Group of orthologs #543. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.chinensis:245

Q754J8              	100.00%		L9L047              	100.00%
Bootstrap support for Q754J8 as seed ortholog is 100%.
Bootstrap support for L9L047 as seed ortholog is 100%.

Group of orthologs #544. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 T.chinensis:245

Q751N3              	100.00%		L9L7Z3              	100.00%
Bootstrap support for Q751N3 as seed ortholog is 100%.
Bootstrap support for L9L7Z3 as seed ortholog is 100%.

Group of orthologs #545. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.chinensis:51

Q75BX7              	100.00%		L9KTD9              	100.00%
                    	       		L9KR52              	51.81%
                    	       		L8Y1V8              	23.55%
                    	       		L9KR36              	21.01%
                    	       		L9JBJ6              	7.79%
                    	       		L8Y7B2              	7.43%
Bootstrap support for Q75BX7 as seed ortholog is 99%.
Bootstrap support for L9KTD9 as seed ortholog is 92%.

Group of orthologs #546. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:170 T.chinensis:64

Q75EF7              	100.00%		L9KLJ3              	100.00%
                    	       		L8Y6I9              	19.81%
Bootstrap support for Q75EF7 as seed ortholog is 99%.
Bootstrap support for L9KLJ3 as seed ortholog is 89%.

Group of orthologs #547. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.chinensis:244

Q757W9              	100.00%		L8Y0R1              	100.00%
Bootstrap support for Q757W9 as seed ortholog is 100%.
Bootstrap support for L8Y0R1 as seed ortholog is 100%.

Group of orthologs #548. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.chinensis:244

Q74ZY3              	100.00%		L8YGV7              	100.00%
Bootstrap support for Q74ZY3 as seed ortholog is 100%.
Bootstrap support for L8YGV7 as seed ortholog is 100%.

Group of orthologs #549. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.chinensis:97

Q75EI5              	100.00%		L9KF73              	100.00%
Bootstrap support for Q75EI5 as seed ortholog is 100%.
Bootstrap support for L9KF73 as seed ortholog is 99%.

Group of orthologs #550. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 T.chinensis:244

Q756K6              	100.00%		L9L9Q1              	100.00%
Bootstrap support for Q756K6 as seed ortholog is 100%.
Bootstrap support for L9L9Q1 as seed ortholog is 100%.

Group of orthologs #551. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 T.chinensis:243

Q75AJ1              	100.00%		L9L5U3              	100.00%
Bootstrap support for Q75AJ1 as seed ortholog is 100%.
Bootstrap support for L9L5U3 as seed ortholog is 100%.

Group of orthologs #552. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:36

Q757N1              	100.00%		L9L023              	100.00%
                    	       		L8Y720              	65.22%
                    	       		L9JG66              	60.87%
                    	       		L8YAQ6              	56.52%
                    	       		L9KX12              	47.83%
                    	       		L8YAG7              	13.04%
                    	       		L8YGB9              	8.70%
Bootstrap support for Q757N1 as seed ortholog is 100%.
Bootstrap support for L9L023 as seed ortholog is 99%.

Group of orthologs #553. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 T.chinensis:242

Q758X7              	100.00%		L9KCW9              	100.00%
                    	       		L9L1X4              	66.81%
                    	       		L9KK56              	14.60%
Bootstrap support for Q758X7 as seed ortholog is 100%.
Bootstrap support for L9KCW9 as seed ortholog is 100%.

Group of orthologs #554. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 T.chinensis:242

Q750F1              	100.00%		L9KTD5              	100.00%
Bootstrap support for Q750F1 as seed ortholog is 100%.
Bootstrap support for L9KTD5 as seed ortholog is 100%.

Group of orthologs #555. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 T.chinensis:242

Q751K4              	100.00%		L9L3E5              	100.00%
Bootstrap support for Q751K4 as seed ortholog is 100%.
Bootstrap support for L9L3E5 as seed ortholog is 100%.

Group of orthologs #556. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 T.chinensis:242

Q75BR9              	100.00%		L9KZW0              	100.00%
Bootstrap support for Q75BR9 as seed ortholog is 100%.
Bootstrap support for L9KZW0 as seed ortholog is 100%.

Group of orthologs #557. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 T.chinensis:55

Q756Y3              	100.00%		L9KJA5              	100.00%
                    	       		L9KJE9              	14.96%
                    	       		L9KD48              	11.64%
                    	       		L9JCR3              	11.16%
                    	       		L9KNK4              	5.46%
                    	       		L9LCB7              	5.23%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for L9KJA5 as seed ortholog is 98%.

Group of orthologs #558. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:33 T.chinensis:241

Q75AN0              	100.00%		L9L2Z1              	100.00%
Bootstrap support for Q75AN0 as seed ortholog is 81%.
Bootstrap support for L9L2Z1 as seed ortholog is 100%.

Group of orthologs #559. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 T.chinensis:240

Q754U3              	100.00%		L9KPM1              	100.00%
                    	       		L9KQY8              	53.06%
Bootstrap support for Q754U3 as seed ortholog is 100%.
Bootstrap support for L9KPM1 as seed ortholog is 100%.

Group of orthologs #560. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:240

Q75CZ3              	100.00%		L8Y4B2              	100.00%
Bootstrap support for Q75CZ3 as seed ortholog is 99%.
Bootstrap support for L8Y4B2 as seed ortholog is 100%.

Group of orthologs #561. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 T.chinensis:180

Q753J4              	100.00%		L9L6R2              	100.00%
Bootstrap support for Q753J4 as seed ortholog is 100%.
Bootstrap support for L9L6R2 as seed ortholog is 100%.

Group of orthologs #562. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 T.chinensis:32

Q750W6              	100.00%		L9KFG6              	100.00%
Q756U6              	8.08%		L9JD30              	8.79%
Bootstrap support for Q750W6 as seed ortholog is 100%.
Bootstrap support for L9KFG6 as seed ortholog is 94%.

Group of orthologs #563. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 T.chinensis:142

Q75ER3              	100.00%		L9KIR5              	100.00%
Q75EP7              	100.00%		L9KJ49              	100.00%
Bootstrap support for Q75ER3 as seed ortholog is 100%.
Bootstrap support for Q75EP7 as seed ortholog is 100%.
Bootstrap support for L9KIR5 as seed ortholog is 99%.
Bootstrap support for L9KJ49 as seed ortholog is 99%.

Group of orthologs #564. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.chinensis:163

Q75C26              	100.00%		L8YB09              	100.00%
Bootstrap support for Q75C26 as seed ortholog is 99%.
Bootstrap support for L8YB09 as seed ortholog is 99%.

Group of orthologs #565. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:184

Q753M7              	100.00%		L9KW39              	100.00%
Bootstrap support for Q753M7 as seed ortholog is 100%.
Bootstrap support for L9KW39 as seed ortholog is 100%.

Group of orthologs #566. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 T.chinensis:137

Q75A66              	100.00%		L8Y4R8              	100.00%
                    	       		L9JDL3              	33.23%
Bootstrap support for Q75A66 as seed ortholog is 100%.
Bootstrap support for L8Y4R8 as seed ortholog is 99%.

Group of orthologs #567. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 T.chinensis:238

Q755M2              	100.00%		L9LFQ7              	100.00%
                    	       		L9JFD2              	21.40%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for L9LFQ7 as seed ortholog is 100%.

Group of orthologs #568. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 T.chinensis:238

Q753C6              	100.00%		L9KSC3              	100.00%
Bootstrap support for Q753C6 as seed ortholog is 100%.
Bootstrap support for L9KSC3 as seed ortholog is 100%.

Group of orthologs #569. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 T.chinensis:144

Q74ZK3              	100.00%		L9L989              	100.00%
                    	       		L9JD85              	22.31%
                    	       		L9KRK5              	17.36%
                    	       		L9L7D2              	15.70%
Bootstrap support for Q74ZK3 as seed ortholog is 100%.
Bootstrap support for L9L989 as seed ortholog is 100%.

Group of orthologs #570. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 T.chinensis:85

Q75EE7              	100.00%		L9KLN4              	100.00%
                    	       		L8Y8E1              	71.58%
                    	       		L9L8A1              	43.16%
                    	       		L9KQ95              	14.74%
Bootstrap support for Q75EE7 as seed ortholog is 100%.
Bootstrap support for L9KLN4 as seed ortholog is 100%.

Group of orthologs #571. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 T.chinensis:112

Q75DN5              	100.00%		L8Y0V0              	100.00%
Bootstrap support for Q75DN5 as seed ortholog is 100%.
Bootstrap support for L8Y0V0 as seed ortholog is 99%.

Group of orthologs #572. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 T.chinensis:235

Q757S9              	100.00%		L8Y3H7              	100.00%
Bootstrap support for Q757S9 as seed ortholog is 100%.
Bootstrap support for L8Y3H7 as seed ortholog is 100%.

Group of orthologs #573. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 T.chinensis:235

Q756A9              	100.00%		L8Y7X0              	100.00%
Bootstrap support for Q756A9 as seed ortholog is 100%.
Bootstrap support for L8Y7X0 as seed ortholog is 100%.

Group of orthologs #574. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.chinensis:62

Q755T4              	100.00%		L9KHJ7              	100.00%
Bootstrap support for Q755T4 as seed ortholog is 99%.
Bootstrap support for L9KHJ7 as seed ortholog is 98%.

Group of orthologs #575. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:27

Q756T0              	100.00%		L8Y0K6              	100.00%
Bootstrap support for Q756T0 as seed ortholog is 99%.
Bootstrap support for L8Y0K6 as seed ortholog is 90%.

Group of orthologs #576. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.chinensis:107

Q75C48              	100.00%		L8YDV1              	100.00%
Bootstrap support for Q75C48 as seed ortholog is 99%.
Bootstrap support for L8YDV1 as seed ortholog is 99%.

Group of orthologs #577. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 T.chinensis:234

Q75F45              	100.00%		L9JAV4              	100.00%
Bootstrap support for Q75F45 as seed ortholog is 100%.
Bootstrap support for L9JAV4 as seed ortholog is 100%.

Group of orthologs #578. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:170

Q75BS2              	100.00%		L9KKM8              	100.00%
Bootstrap support for Q75BS2 as seed ortholog is 100%.
Bootstrap support for L9KKM8 as seed ortholog is 100%.

Group of orthologs #579. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:186

Q754V5              	100.00%		L9KR18              	100.00%
                    	       		L9KHH2              	53.20%
                    	       		L9KY20              	40.39%
                    	       		L8Y9V6              	14.38%
Bootstrap support for Q754V5 as seed ortholog is 93%.
Bootstrap support for L9KR18 as seed ortholog is 99%.

Group of orthologs #580. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.chinensis:79

Q751V7              	100.00%		L9KZR9              	100.00%
                    	       		L9KYF5              	5.51%
Bootstrap support for Q751V7 as seed ortholog is 100%.
Bootstrap support for L9KZR9 as seed ortholog is 91%.

Group of orthologs #581. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.chinensis:233

Q750Q9              	100.00%		L9KGP4              	100.00%
Bootstrap support for Q750Q9 as seed ortholog is 100%.
Bootstrap support for L9KGP4 as seed ortholog is 100%.

Group of orthologs #582. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 T.chinensis:233

Q74ZI0              	100.00%		L9L0V0              	100.00%
Bootstrap support for Q74ZI0 as seed ortholog is 100%.
Bootstrap support for L9L0V0 as seed ortholog is 100%.

Group of orthologs #583. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 T.chinensis:232

Q74ZW4              	100.00%		L9L6V0              	100.00%
                    	       		L9JBY4              	28.88%
Bootstrap support for Q74ZW4 as seed ortholog is 100%.
Bootstrap support for L9L6V0 as seed ortholog is 100%.

Group of orthologs #584. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 T.chinensis:232

Q75A16              	100.00%		L9KFV4              	100.00%
Bootstrap support for Q75A16 as seed ortholog is 100%.
Bootstrap support for L9KFV4 as seed ortholog is 100%.

Group of orthologs #585. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 T.chinensis:88

Q757X1              	100.00%		L9L7A7              	100.00%
                    	       		L9L0Z6              	41.09%
                    	       		L9KZM7              	19.05%
                    	       		L8Y897              	14.81%
Bootstrap support for Q757X1 as seed ortholog is 100%.
Bootstrap support for L9L7A7 as seed ortholog is 97%.

Group of orthologs #586. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 T.chinensis:231

Q753X4              	100.00%		L9JAI3              	100.00%
Bootstrap support for Q753X4 as seed ortholog is 100%.
Bootstrap support for L9JAI3 as seed ortholog is 100%.

Group of orthologs #587. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:40

Q751F5              	100.00%		L9JHU8              	100.00%
                    	       		L8YDX4              	14.03%
Bootstrap support for Q751F5 as seed ortholog is 95%.
Bootstrap support for L9JHU8 as seed ortholog is 95%.

Group of orthologs #588. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:230

Q753F3              	100.00%		L8Y966              	100.00%
Bootstrap support for Q753F3 as seed ortholog is 95%.
Bootstrap support for L8Y966 as seed ortholog is 100%.

Group of orthologs #589. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 T.chinensis:230

Q75D05              	100.00%		L9JWK4              	100.00%
Bootstrap support for Q75D05 as seed ortholog is 100%.
Bootstrap support for L9JWK4 as seed ortholog is 100%.

Group of orthologs #590. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 T.chinensis:64

Q75EH1              	100.00%		L9KN96              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for L9KN96 as seed ortholog is 99%.

Group of orthologs #591. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.chinensis:43

Q75ES0              	100.00%		L9KKP1              	100.00%
                    	       		L9JFK1              	41.97%
                    	       		L8Y3W7              	12.48%
                    	       		L9JJ01              	10.02%
                    	       		L8YF71              	6.24%
                    	       		L9JDC5              	5.10%
Bootstrap support for Q75ES0 as seed ortholog is 88%.
Bootstrap support for L9KKP1 as seed ortholog is 90%.

Group of orthologs #592. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.chinensis:131

Q75AG1              	100.00%		L9KMQ0              	100.00%
                    	       		L8YFV9              	37.10%
                    	       		L9KNF2              	19.78%
Bootstrap support for Q75AG1 as seed ortholog is 99%.
Bootstrap support for L9KMQ0 as seed ortholog is 99%.

Group of orthologs #593. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.chinensis:154

Q75F88              	100.00%		L9KLM9              	100.00%
                    	       		L8YC85              	9.41%
Bootstrap support for Q75F88 as seed ortholog is 100%.
Bootstrap support for L9KLM9 as seed ortholog is 100%.

Group of orthologs #594. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.chinensis:228

Q75DB6              	100.00%		L9L2G3              	100.00%
Bootstrap support for Q75DB6 as seed ortholog is 100%.
Bootstrap support for L9L2G3 as seed ortholog is 100%.

Group of orthologs #595. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 T.chinensis:169

Q75BC1              	100.00%		L9L9G3              	100.00%
Bootstrap support for Q75BC1 as seed ortholog is 100%.
Bootstrap support for L9L9G3 as seed ortholog is 100%.

Group of orthologs #596. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.chinensis:126

Q75F47              	100.00%		L9KYA0              	100.00%
                    	       		L9L4M5              	31.48%
Bootstrap support for Q75F47 as seed ortholog is 99%.
Bootstrap support for L9KYA0 as seed ortholog is 99%.

Group of orthologs #597. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 T.chinensis:227

Q75ES9              	100.00%		L9KSP7              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for L9KSP7 as seed ortholog is 100%.

Group of orthologs #598. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 T.chinensis:75

Q74Z36              	100.00%		L8YDM0              	100.00%
                    	       		L8YCF4              	72.42%
Bootstrap support for Q74Z36 as seed ortholog is 100%.
Bootstrap support for L8YDM0 as seed ortholog is 96%.

Group of orthologs #599. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 T.chinensis:173

Q750Y5              	100.00%		L8Y7I4              	100.00%
Bootstrap support for Q750Y5 as seed ortholog is 100%.
Bootstrap support for L8Y7I4 as seed ortholog is 99%.

Group of orthologs #600. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 T.chinensis:226

Q754Q0              	100.00%		L9KUH5              	100.00%
Bootstrap support for Q754Q0 as seed ortholog is 100%.
Bootstrap support for L9KUH5 as seed ortholog is 100%.

Group of orthologs #601. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 T.chinensis:226

Q759V1              	100.00%		L9KVY6              	100.00%
Bootstrap support for Q759V1 as seed ortholog is 100%.
Bootstrap support for L9KVY6 as seed ortholog is 100%.

Group of orthologs #602. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:165

Q755R8              	100.00%		L9L9L2              	100.00%
                    	       		L9L8T4              	60.93%
                    	       		L9KR67              	38.55%
Bootstrap support for Q755R8 as seed ortholog is 99%.
Bootstrap support for L9L9L2 as seed ortholog is 99%.

Group of orthologs #603. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:225

Q752C7              	100.00%		L8Y0N4              	100.00%
Bootstrap support for Q752C7 as seed ortholog is 100%.
Bootstrap support for L8Y0N4 as seed ortholog is 100%.

Group of orthologs #604. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:225

Q753M6              	100.00%		L8Y8Y6              	100.00%
Bootstrap support for Q753M6 as seed ortholog is 100%.
Bootstrap support for L8Y8Y6 as seed ortholog is 100%.

Group of orthologs #605. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:225

Q75BS3              	100.00%		L8YE89              	100.00%
Bootstrap support for Q75BS3 as seed ortholog is 100%.
Bootstrap support for L8YE89 as seed ortholog is 100%.

Group of orthologs #606. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:225

Q755C7              	100.00%		L9JJ84              	100.00%
Bootstrap support for Q755C7 as seed ortholog is 100%.
Bootstrap support for L9JJ84 as seed ortholog is 100%.

Group of orthologs #607. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:116

Q756S5              	100.00%		L9K0B5              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for L9K0B5 as seed ortholog is 100%.

Group of orthologs #608. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:225

Q74ZV7              	100.00%		L9KJU5              	100.00%
Bootstrap support for Q74ZV7 as seed ortholog is 100%.
Bootstrap support for L9KJU5 as seed ortholog is 100%.

Group of orthologs #609. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:63

Q758E0              	100.00%		L9KNF9              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for L9KNF9 as seed ortholog is 99%.

Group of orthologs #610. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 T.chinensis:225

Q758P1              	100.00%		L9KVF4              	100.00%
Bootstrap support for Q758P1 as seed ortholog is 100%.
Bootstrap support for L9KVF4 as seed ortholog is 100%.

Group of orthologs #611. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:36 T.chinensis:87

Q75AK9              	100.00%		L9KUB7              	100.00%
Bootstrap support for Q75AK9 as seed ortholog is 66%.
Alternative seed ortholog is Q750H5 (36 bits away from this cluster)
Bootstrap support for L9KUB7 as seed ortholog is 95%.

Group of orthologs #612. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 T.chinensis:224

Q753Q6              	100.00%		L8YBU2              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 100%.
Bootstrap support for L8YBU2 as seed ortholog is 100%.

Group of orthologs #613. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:36 T.chinensis:2

Q75BH1              	100.00%		L8Y7H2              	100.00%
Bootstrap support for Q75BH1 as seed ortholog is 82%.
Bootstrap support for L8Y7H2 as seed ortholog is 51%.
Alternative seed ortholog is L9L1F0 (2 bits away from this cluster)

Group of orthologs #614. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:18 T.chinensis:123

Q75CM6              	100.00%		L9L160              	100.00%
                    	       		L9L5T1              	37.60%
                    	       		L9JD95              	22.04%
                    	       		L9L9T5              	16.86%
                    	       		L9KM10              	16.69%
                    	       		L9JCM9              	14.91%
Bootstrap support for Q75CM6 as seed ortholog is 66%.
Alternative seed ortholog is Q755W7 (18 bits away from this cluster)
Bootstrap support for L9L160 as seed ortholog is 99%.

Group of orthologs #615. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:92

Q753G9              	100.00%		L9L6Z6              	100.00%
                    	       		L9JD12              	15.68%
Bootstrap support for Q753G9 as seed ortholog is 84%.
Bootstrap support for L9L6Z6 as seed ortholog is 98%.

Group of orthologs #616. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.chinensis:223

Q757G2              	100.00%		L8Y4H1              	100.00%
Bootstrap support for Q757G2 as seed ortholog is 100%.
Bootstrap support for L8Y4H1 as seed ortholog is 100%.

Group of orthologs #617. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.chinensis:223

Q75C85              	100.00%		L8Y490              	100.00%
Bootstrap support for Q75C85 as seed ortholog is 100%.
Bootstrap support for L8Y490 as seed ortholog is 100%.

Group of orthologs #618. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.chinensis:223

Q75B81              	100.00%		L8Y9B1              	100.00%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for L8Y9B1 as seed ortholog is 100%.

Group of orthologs #619. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.chinensis:223

Q757L7              	100.00%		L9KMI1              	100.00%
Bootstrap support for Q757L7 as seed ortholog is 100%.
Bootstrap support for L9KMI1 as seed ortholog is 100%.

Group of orthologs #620. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 T.chinensis:223

Q75B56              	100.00%		L9LFV3              	100.00%
Bootstrap support for Q75B56 as seed ortholog is 100%.
Bootstrap support for L9LFV3 as seed ortholog is 100%.

Group of orthologs #621. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 T.chinensis:222

Q754I7              	100.00%		L9JFC9              	100.00%
Bootstrap support for Q754I7 as seed ortholog is 100%.
Bootstrap support for L9JFC9 as seed ortholog is 100%.

Group of orthologs #622. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 T.chinensis:92

Q756F0              	100.00%		L9L485              	100.00%
                    	       		L9L0Q1              	43.53%
                    	       		L9JT33              	40.00%
                    	       		L9JGZ8              	32.94%
                    	       		L9JYC7              	23.53%
Bootstrap support for Q756F0 as seed ortholog is 100%.
Bootstrap support for L9L485 as seed ortholog is 100%.

Group of orthologs #623. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.chinensis:220

Q75BC0              	100.00%		L8Y654              	100.00%
Bootstrap support for Q75BC0 as seed ortholog is 100%.
Bootstrap support for L8Y654 as seed ortholog is 100%.

Group of orthologs #624. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.chinensis:220

Q755C1              	100.00%		L8YG91              	100.00%
Bootstrap support for Q755C1 as seed ortholog is 100%.
Bootstrap support for L8YG91 as seed ortholog is 100%.

Group of orthologs #625. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.chinensis:220

Q75CN7              	100.00%		L9JKG6              	100.00%
Bootstrap support for Q75CN7 as seed ortholog is 100%.
Bootstrap support for L9JKG6 as seed ortholog is 100%.

Group of orthologs #626. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 T.chinensis:220

Q75CP8              	100.00%		L9L669              	100.00%
Bootstrap support for Q75CP8 as seed ortholog is 100%.
Bootstrap support for L9L669 as seed ortholog is 100%.

Group of orthologs #627. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 T.chinensis:55

Q751J4              	100.00%		L9JWK7              	100.00%
                    	       		L8Y9V5              	9.84%
Bootstrap support for Q751J4 as seed ortholog is 100%.
Bootstrap support for L9JWK7 as seed ortholog is 99%.

Group of orthologs #628. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 T.chinensis:219

Q752U1              	100.00%		L9JEJ2              	100.00%
Bootstrap support for Q752U1 as seed ortholog is 100%.
Bootstrap support for L9JEJ2 as seed ortholog is 100%.

Group of orthologs #629. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 T.chinensis:219

Q754X5              	100.00%		L9LAX6              	100.00%
Bootstrap support for Q754X5 as seed ortholog is 100%.
Bootstrap support for L9LAX6 as seed ortholog is 100%.

Group of orthologs #630. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.chinensis:218

Q75BY0              	100.00%		L9LB48              	100.00%
                    	       		L8Y6E7              	43.34%
                    	       		L9K1D0              	19.03%
                    	       		L9L9X2              	14.80%
                    	       		L8Y521              	9.30%
Bootstrap support for Q75BY0 as seed ortholog is 100%.
Bootstrap support for L9LB48 as seed ortholog is 100%.

Group of orthologs #631. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:27

Q756J1              	100.00%		L8Y657              	100.00%
                    	       		L9JJ19              	56.86%
                    	       		L9L8V6              	55.87%
                    	       		L9JCD8              	41.98%
Bootstrap support for Q756J1 as seed ortholog is 99%.
Bootstrap support for L8Y657 as seed ortholog is 75%.

Group of orthologs #632. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.chinensis:165

Q750E8              	100.00%		L8Y7I9              	100.00%
Bootstrap support for Q750E8 as seed ortholog is 100%.
Bootstrap support for L8Y7I9 as seed ortholog is 99%.

Group of orthologs #633. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.chinensis:218

Q750L2              	100.00%		L9KJU1              	100.00%
Bootstrap support for Q750L2 as seed ortholog is 100%.
Bootstrap support for L9KJU1 as seed ortholog is 100%.

Group of orthologs #634. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.chinensis:218

Q759E4              	100.00%		L9KGQ8              	100.00%
Bootstrap support for Q759E4 as seed ortholog is 100%.
Bootstrap support for L9KGQ8 as seed ortholog is 100%.

Group of orthologs #635. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 T.chinensis:218

Q74Z42              	100.00%		L9KUZ3              	100.00%
Bootstrap support for Q74Z42 as seed ortholog is 100%.
Bootstrap support for L9KUZ3 as seed ortholog is 100%.

Group of orthologs #636. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.chinensis:57

Q75CT2              	100.00%		L8YAB2              	100.00%
                    	       		L9LAT2              	100.00%
                    	       		L9LAA7              	27.84%
                    	       		L9JCZ3              	25.57%
Bootstrap support for Q75CT2 as seed ortholog is 100%.
Bootstrap support for L8YAB2 as seed ortholog is 99%.
Bootstrap support for L9LAT2 as seed ortholog is 99%.

Group of orthologs #637. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.chinensis:217

Q751M0              	100.00%		L9L429              	100.00%
                    	       		L9JA64              	75.24%
                    	       		L9K753              	43.81%
Bootstrap support for Q751M0 as seed ortholog is 100%.
Bootstrap support for L9L429 as seed ortholog is 100%.

Group of orthologs #638. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.chinensis:86

Q754S1              	100.00%		L8Y793              	100.00%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for L8Y793 as seed ortholog is 98%.

Group of orthologs #639. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.chinensis:217

Q75CC4              	100.00%		L9KK16              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for L9KK16 as seed ortholog is 100%.

Group of orthologs #640. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 T.chinensis:217

Q75E05              	100.00%		L9KM51              	100.00%
Bootstrap support for Q75E05 as seed ortholog is 100%.
Bootstrap support for L9KM51 as seed ortholog is 100%.

Group of orthologs #641. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:216

Q75DU1              	100.00%		L9LCW3              	100.00%
Q753C0              	5.07%		L8YAB8              	15.59%
Bootstrap support for Q75DU1 as seed ortholog is 99%.
Bootstrap support for L9LCW3 as seed ortholog is 100%.

Group of orthologs #642. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 T.chinensis:130

Q751F6              	100.00%		L9L202              	100.00%
Bootstrap support for Q751F6 as seed ortholog is 100%.
Bootstrap support for L9L202 as seed ortholog is 100%.

Group of orthologs #643. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.chinensis:215

Q757E5              	100.00%		L8YDX6              	100.00%
                    	       		L8YB88              	26.84%
                    	       		L9LCK2              	7.22%
Bootstrap support for Q757E5 as seed ortholog is 100%.
Bootstrap support for L8YDX6 as seed ortholog is 100%.

Group of orthologs #644. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.chinensis:215

Q75A48              	100.00%		L8Y2Q1              	100.00%
                    	       		L9KPV3              	11.94%
Bootstrap support for Q75A48 as seed ortholog is 100%.
Bootstrap support for L8Y2Q1 as seed ortholog is 100%.

Group of orthologs #645. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.chinensis:149

Q75AY7              	100.00%		L9KMS8              	100.00%
                    	       		L9KLT9              	19.33%
Bootstrap support for Q75AY7 as seed ortholog is 100%.
Bootstrap support for L9KMS8 as seed ortholog is 100%.

Group of orthologs #646. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 T.chinensis:215

Q75C84              	100.00%		L9KV87              	100.00%
Bootstrap support for Q75C84 as seed ortholog is 100%.
Bootstrap support for L9KV87 as seed ortholog is 100%.

Group of orthologs #647. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.chinensis:214

Q751Q9              	100.00%		L9JJ92              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for L9JJ92 as seed ortholog is 100%.

Group of orthologs #648. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 T.chinensis:214

Q75A47              	100.00%		L9KJT0              	100.00%
Bootstrap support for Q75A47 as seed ortholog is 100%.
Bootstrap support for L9KJT0 as seed ortholog is 100%.

Group of orthologs #649. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.chinensis:213

Q75C28              	100.00%		L8Y9C8              	100.00%
Bootstrap support for Q75C28 as seed ortholog is 100%.
Bootstrap support for L8Y9C8 as seed ortholog is 100%.

Group of orthologs #650. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 T.chinensis:92

Q750N9              	100.00%		L9KLE9              	100.00%
Bootstrap support for Q750N9 as seed ortholog is 100%.
Bootstrap support for L9KLE9 as seed ortholog is 99%.

Group of orthologs #651. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:61

Q75ET2              	100.00%		L8YDJ4              	100.00%
                    	       		L9KZ51              	53.59%
                    	       		L9L982              	46.00%
                    	       		L9LA79              	20.33%
Bootstrap support for Q75ET2 as seed ortholog is 74%.
Alternative seed ortholog is Q755U1 (63 bits away from this cluster)
Bootstrap support for L8YDJ4 as seed ortholog is 98%.

Group of orthologs #652. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.chinensis:212

Q753B2              	100.00%		L8YCJ8              	100.00%
Bootstrap support for Q753B2 as seed ortholog is 100%.
Bootstrap support for L8YCJ8 as seed ortholog is 100%.

Group of orthologs #653. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.chinensis:61

Q75B78              	100.00%		L8YDG5              	100.00%
Bootstrap support for Q75B78 as seed ortholog is 100%.
Bootstrap support for L8YDG5 as seed ortholog is 91%.

Group of orthologs #654. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.chinensis:212

Q75EF1              	100.00%		L9JCL2              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for L9JCL2 as seed ortholog is 100%.

Group of orthologs #655. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:32

Q75BS5              	100.00%		L9KHJ0              	100.00%
Bootstrap support for Q75BS5 as seed ortholog is 89%.
Bootstrap support for L9KHJ0 as seed ortholog is 73%.
Alternative seed ortholog is L9JQA8 (32 bits away from this cluster)

Group of orthologs #656. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 T.chinensis:212

Q757G8              	100.00%		L9L782              	100.00%
Bootstrap support for Q757G8 as seed ortholog is 100%.
Bootstrap support for L9L782 as seed ortholog is 100%.

Group of orthologs #657. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.chinensis:212

Q759K2              	100.00%		L9LAR3              	100.00%
Bootstrap support for Q759K2 as seed ortholog is 99%.
Bootstrap support for L9LAR3 as seed ortholog is 100%.

Group of orthologs #658. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 T.chinensis:41

Q752J5              	100.00%		L9KY99              	100.00%
                    	       		L8YD62              	71.15%
                    	       		L9L212              	63.46%
                    	       		L9KJZ9              	55.77%
                    	       		L9JL13              	51.92%
                    	       		L9J9T4              	40.38%
                    	       		L9JHK3              	38.46%
                    	       		L9LBS7              	32.69%
                    	       		L9L6K7              	23.08%
                    	       		L9L7A9              	17.31%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for L9KY99 as seed ortholog is 99%.

Group of orthologs #659. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.chinensis:211

Q75EH7              	100.00%		L8Y5R4              	100.00%
Bootstrap support for Q75EH7 as seed ortholog is 99%.
Bootstrap support for L8Y5R4 as seed ortholog is 100%.

Group of orthologs #660. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 T.chinensis:211

Q758C3              	100.00%		L9KV92              	100.00%
Bootstrap support for Q758C3 as seed ortholog is 100%.
Bootstrap support for L9KV92 as seed ortholog is 100%.

Group of orthologs #661. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:210

Q753F8              	100.00%		L9KKY5              	100.00%
                    	       		L9KDH9              	51.96%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for L9KKY5 as seed ortholog is 100%.

Group of orthologs #662. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.chinensis:27

Q75B39              	100.00%		L9KS25              	100.00%
                    	       		L8Y8Q7              	64.53%
Bootstrap support for Q75B39 as seed ortholog is 100%.
Bootstrap support for L9KS25 as seed ortholog is 89%.

Group of orthologs #663. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:127

Q752H4              	100.00%		L8Y6Q2              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for L8Y6Q2 as seed ortholog is 99%.

Group of orthologs #664. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.chinensis:109

Q75DL6              	100.00%		L8YAS0              	100.00%
Bootstrap support for Q75DL6 as seed ortholog is 99%.
Bootstrap support for L8YAS0 as seed ortholog is 99%.

Group of orthologs #665. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:210

Q755Z0              	100.00%		L9JJH2              	100.00%
Bootstrap support for Q755Z0 as seed ortholog is 100%.
Bootstrap support for L9JJH2 as seed ortholog is 100%.

Group of orthologs #666. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:28

Q757W4              	100.00%		L9KNY5              	100.00%
Bootstrap support for Q757W4 as seed ortholog is 100%.
Bootstrap support for L9KNY5 as seed ortholog is 89%.

Group of orthologs #667. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:17

Q750L3              	100.00%		L9KWN0              	100.00%
Bootstrap support for Q750L3 as seed ortholog is 99%.
Bootstrap support for L9KWN0 as seed ortholog is 74%.
Alternative seed ortholog is L9KWG8 (17 bits away from this cluster)

Group of orthologs #668. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 T.chinensis:56

Q75AB2              	100.00%		L9LB66              	100.00%
Bootstrap support for Q75AB2 as seed ortholog is 100%.
Bootstrap support for L9LB66 as seed ortholog is 90%.

Group of orthologs #669. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.chinensis:121

Q755U9              	100.00%		L8Y1B5              	100.00%
                    	       		L9KH81              	30.27%
                    	       		L8Y133              	21.78%
                    	       		L9KRA7              	18.77%
                    	       		L9KS45              	16.71%
                    	       		L9KVV9              	11.92%
Bootstrap support for Q755U9 as seed ortholog is 75%.
Bootstrap support for L8Y1B5 as seed ortholog is 99%.

Group of orthologs #670. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:41

Q752V9              	100.00%		L9KVP4              	100.00%
                    	       		L9L9G9              	11.25%
                    	       		L9KQE9              	8.75%
Bootstrap support for Q752V9 as seed ortholog is 100%.
Bootstrap support for L9KVP4 as seed ortholog is 98%.

Group of orthologs #671. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 T.chinensis:209

Q759R0              	100.00%		L8YC41              	100.00%
Bootstrap support for Q759R0 as seed ortholog is 100%.
Bootstrap support for L8YC41 as seed ortholog is 100%.

Group of orthologs #672. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 T.chinensis:209

Q755C8              	100.00%		L9KWX3              	100.00%
Bootstrap support for Q755C8 as seed ortholog is 100%.
Bootstrap support for L9KWX3 as seed ortholog is 100%.

Group of orthologs #673. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 T.chinensis:209

Q74ZP9              	100.00%		L9L5Q1              	100.00%
Bootstrap support for Q74ZP9 as seed ortholog is 100%.
Bootstrap support for L9L5Q1 as seed ortholog is 100%.

Group of orthologs #674. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:14 T.chinensis:58

Q75CK3              	100.00%		L8Y6K1              	100.00%
                    	       		L9K0J8              	71.56%
Bootstrap support for Q75CK3 as seed ortholog is 70%.
Alternative seed ortholog is Q75F92 (14 bits away from this cluster)
Bootstrap support for L8Y6K1 as seed ortholog is 98%.

Group of orthologs #675. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.chinensis:208

Q75F60              	100.00%		L8Y9N4              	100.00%
Bootstrap support for Q75F60 as seed ortholog is 100%.
Bootstrap support for L8Y9N4 as seed ortholog is 100%.

Group of orthologs #676. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.chinensis:208

Q758K0              	100.00%		L9L409              	100.00%
Bootstrap support for Q758K0 as seed ortholog is 100%.
Bootstrap support for L9L409 as seed ortholog is 100%.

Group of orthologs #677. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 T.chinensis:208

Q756F8              	100.00%		L9L9C2              	100.00%
Bootstrap support for Q756F8 as seed ortholog is 100%.
Bootstrap support for L9L9C2 as seed ortholog is 100%.

Group of orthologs #678. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.chinensis:207

Q758S4              	100.00%		L8YGX3              	100.00%
Bootstrap support for Q758S4 as seed ortholog is 100%.
Bootstrap support for L8YGX3 as seed ortholog is 100%.

Group of orthologs #679. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:207

Q75C30              	100.00%		L9KH77              	100.00%
Bootstrap support for Q75C30 as seed ortholog is 79%.
Bootstrap support for L9KH77 as seed ortholog is 100%.

Group of orthologs #680. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.chinensis:207

Q75CD7              	100.00%		L9KPR6              	100.00%
Bootstrap support for Q75CD7 as seed ortholog is 100%.
Bootstrap support for L9KPR6 as seed ortholog is 100%.

Group of orthologs #681. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 T.chinensis:17

Q751R9              	100.00%		L9L960              	100.00%
Bootstrap support for Q751R9 as seed ortholog is 100%.
Bootstrap support for L9L960 as seed ortholog is 63%.
Alternative seed ortholog is L9L7L9 (17 bits away from this cluster)

Group of orthologs #682. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.chinensis:100

Q74ZU8              	100.00%		L9KV00              	100.00%
                    	       		L9JEB1              	21.90%
Bootstrap support for Q74ZU8 as seed ortholog is 100%.
Bootstrap support for L9KV00 as seed ortholog is 98%.

Group of orthologs #683. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.chinensis:206

Q750E7              	100.00%		L8Y3X3              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 100%.
Bootstrap support for L8Y3X3 as seed ortholog is 100%.

Group of orthologs #684. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 T.chinensis:206

Q75E00              	100.00%		L8Y685              	100.00%
Bootstrap support for Q75E00 as seed ortholog is 100%.
Bootstrap support for L8Y685 as seed ortholog is 100%.

Group of orthologs #685. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.chinensis:71

Q759M4              	100.00%		L9K4S9              	100.00%
Q759X1              	19.64%		
Bootstrap support for Q759M4 as seed ortholog is 100%.
Bootstrap support for L9K4S9 as seed ortholog is 96%.

Group of orthologs #686. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.chinensis:205

Q75F75              	100.00%		L9JGG4              	100.00%
                    	       		L9KUA5              	11.27%
Bootstrap support for Q75F75 as seed ortholog is 100%.
Bootstrap support for L9JGG4 as seed ortholog is 100%.

Group of orthologs #687. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.chinensis:205

Q750I1              	100.00%		L9L688              	100.00%
                    	       		L9KK85              	40.16%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for L9L688 as seed ortholog is 100%.

Group of orthologs #688. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:48

Q755K5              	100.00%		L9KUZ6              	100.00%
Bootstrap support for Q755K5 as seed ortholog is 90%.
Bootstrap support for L9KUZ6 as seed ortholog is 88%.

Group of orthologs #689. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.chinensis:205

Q75BI7              	100.00%		L9L349              	100.00%
Bootstrap support for Q75BI7 as seed ortholog is 100%.
Bootstrap support for L9L349 as seed ortholog is 100%.

Group of orthologs #690. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 T.chinensis:205

Q75AM2              	100.00%		L9L4N8              	100.00%
Bootstrap support for Q75AM2 as seed ortholog is 100%.
Bootstrap support for L9L4N8 as seed ortholog is 100%.

Group of orthologs #691. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.chinensis:204

Q752X0              	100.00%		L8YEP6              	100.00%
Bootstrap support for Q752X0 as seed ortholog is 100%.
Bootstrap support for L8YEP6 as seed ortholog is 100%.

Group of orthologs #692. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.chinensis:204

Q758H5              	100.00%		L9J9E2              	100.00%
Bootstrap support for Q758H5 as seed ortholog is 100%.
Bootstrap support for L9J9E2 as seed ortholog is 100%.

Group of orthologs #693. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.chinensis:204

Q75C46              	100.00%		L9KI24              	100.00%
Bootstrap support for Q75C46 as seed ortholog is 99%.
Bootstrap support for L9KI24 as seed ortholog is 100%.

Group of orthologs #694. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 T.chinensis:204

Q75DI9              	100.00%		L9L4X4              	100.00%
Bootstrap support for Q75DI9 as seed ortholog is 100%.
Bootstrap support for L9L4X4 as seed ortholog is 100%.

Group of orthologs #695. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:73

Q757J1              	100.00%		L9KTS3              	100.00%
Q751M5              	100.00%		L9JD38              	100.00%
Bootstrap support for Q757J1 as seed ortholog is 96%.
Bootstrap support for Q751M5 as seed ortholog is 92%.
Bootstrap support for L9KTS3 as seed ortholog is 94%.
Bootstrap support for L9JD38 as seed ortholog is 89%.

Group of orthologs #696. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:131

Q750H1              	100.00%		L8YHH2              	100.00%
Bootstrap support for Q750H1 as seed ortholog is 99%.
Bootstrap support for L8YHH2 as seed ortholog is 99%.

Group of orthologs #697. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 T.chinensis:203

Q759R1              	100.00%		L9JTD7              	100.00%
Bootstrap support for Q759R1 as seed ortholog is 100%.
Bootstrap support for L9JTD7 as seed ortholog is 100%.

Group of orthologs #698. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 T.chinensis:203

Q754U1              	100.00%		L9KUJ2              	100.00%
Bootstrap support for Q754U1 as seed ortholog is 100%.
Bootstrap support for L9KUJ2 as seed ortholog is 100%.

Group of orthologs #699. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 T.chinensis:203

Q74ZJ1              	100.00%		L9KZ26              	100.00%
Bootstrap support for Q74ZJ1 as seed ortholog is 100%.
Bootstrap support for L9KZ26 as seed ortholog is 100%.

Group of orthologs #700. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:202 T.chinensis:202

Q750X3              	100.00%		L8Y9U9              	100.00%
                    	       		L9LEV0              	100.00%
Bootstrap support for Q750X3 as seed ortholog is 100%.
Bootstrap support for L8Y9U9 as seed ortholog is 100%.
Bootstrap support for L9LEV0 as seed ortholog is 100%.

Group of orthologs #701. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:116

Q75AS7              	100.00%		L9J9H2              	100.00%
                    	       		L9JC33              	80.46%
                    	       		L9JH64              	50.57%
                    	       		L9L6X9              	10.34%
Bootstrap support for Q75AS7 as seed ortholog is 100%.
Bootstrap support for L9J9H2 as seed ortholog is 99%.

Group of orthologs #702. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:64

Q754V6              	100.00%		L8YG01              	100.00%
                    	       		L9KW57              	58.04%
                    	       		L9L2Z4              	49.11%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for L8YG01 as seed ortholog is 99%.

Group of orthologs #703. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:201

Q75CU5              	100.00%		L9L0Q9              	100.00%
                    	       		L9KQG5              	47.97%
                    	       		L9KPP5              	41.46%
Bootstrap support for Q75CU5 as seed ortholog is 100%.
Bootstrap support for L9L0Q9 as seed ortholog is 100%.

Group of orthologs #704. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:201

Q75DX7              	100.00%		L8Y5K1              	100.00%
Bootstrap support for Q75DX7 as seed ortholog is 100%.
Bootstrap support for L8Y5K1 as seed ortholog is 100%.

Group of orthologs #705. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:145

Q756D6              	100.00%		L9KNL5              	100.00%
Bootstrap support for Q756D6 as seed ortholog is 100%.
Bootstrap support for L9KNL5 as seed ortholog is 99%.

Group of orthologs #706. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:102

Q75F52              	100.00%		L9KNB0              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 100%.
Bootstrap support for L9KNB0 as seed ortholog is 99%.

Group of orthologs #707. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 T.chinensis:201

Q75DV2              	100.00%		L9KVS3              	100.00%
Bootstrap support for Q75DV2 as seed ortholog is 100%.
Bootstrap support for L9KVS3 as seed ortholog is 100%.

Group of orthologs #708. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.chinensis:200

Q75EC1              	100.00%		L9JFI9              	100.00%
Q75F06              	5.31%		
Bootstrap support for Q75EC1 as seed ortholog is 100%.
Bootstrap support for L9JFI9 as seed ortholog is 100%.

Group of orthologs #709. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:66

Q74ZS7              	100.00%		L9KF62              	100.00%
Bootstrap support for Q74ZS7 as seed ortholog is 99%.
Bootstrap support for L9KF62 as seed ortholog is 99%.

Group of orthologs #710. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.chinensis:200

Q75DY0              	100.00%		L9KPX1              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for L9KPX1 as seed ortholog is 100%.

Group of orthologs #711. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.chinensis:126

Q752S5              	100.00%		L9L536              	100.00%
Bootstrap support for Q752S5 as seed ortholog is 100%.
Bootstrap support for L9L536 as seed ortholog is 99%.

Group of orthologs #712. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 T.chinensis:200

Q756J7              	100.00%		L9LA27              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for L9LA27 as seed ortholog is 100%.

Group of orthologs #713. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 T.chinensis:199

Q751Y9              	100.00%		L8Y0J2              	100.00%
Bootstrap support for Q751Y9 as seed ortholog is 100%.
Bootstrap support for L8Y0J2 as seed ortholog is 100%.

Group of orthologs #714. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 T.chinensis:150

Q756D2              	100.00%		L8XZT7              	100.00%
Bootstrap support for Q756D2 as seed ortholog is 100%.
Bootstrap support for L8XZT7 as seed ortholog is 99%.

Group of orthologs #715. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.chinensis:153

Q74Z38              	100.00%		L9L7N1              	100.00%
Bootstrap support for Q74Z38 as seed ortholog is 90%.
Bootstrap support for L9L7N1 as seed ortholog is 100%.

Group of orthologs #716. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.chinensis:198

Q75DD1              	100.00%		L9KHT8              	100.00%
                    	       		L9KKL6              	32.04%
                    	       		L9KIC6              	27.83%
                    	       		L9KMM6              	22.01%
                    	       		L9KSY8              	9.71%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for L9KHT8 as seed ortholog is 100%.

Group of orthologs #717. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.chinensis:198

Q757C0              	100.00%		L9LES0              	100.00%
                    	       		L8Y076              	20.14%
Bootstrap support for Q757C0 as seed ortholog is 100%.
Bootstrap support for L9LES0 as seed ortholog is 100%.

Group of orthologs #718. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 T.chinensis:198

Q75AQ1              	100.00%		L9L6D2              	100.00%
Bootstrap support for Q75AQ1 as seed ortholog is 100%.
Bootstrap support for L9L6D2 as seed ortholog is 100%.

Group of orthologs #719. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.chinensis:42

Q757L4              	100.00%		L9L1T8              	100.00%
Q74ZL4              	98.25%		L8YB77              	87.93%
                    	       		L8Y1L3              	70.69%
                    	       		L8YGD2              	65.52%
Bootstrap support for Q757L4 as seed ortholog is 100%.
Bootstrap support for L9L1T8 as seed ortholog is 99%.

Group of orthologs #720. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.chinensis:7

Q756T8              	100.00%		L9JDX2              	100.00%
Bootstrap support for Q756T8 as seed ortholog is 100%.
Bootstrap support for L9JDX2 as seed ortholog is 56%.
Alternative seed ortholog is L9JBI7 (7 bits away from this cluster)

Group of orthologs #721. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.chinensis:197

Q75BV3              	100.00%		L9JB74              	100.00%
Bootstrap support for Q75BV3 as seed ortholog is 100%.
Bootstrap support for L9JB74 as seed ortholog is 100%.

Group of orthologs #722. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.chinensis:197

Q75EN6              	100.00%		L9JIT7              	100.00%
Bootstrap support for Q75EN6 as seed ortholog is 100%.
Bootstrap support for L9JIT7 as seed ortholog is 100%.

Group of orthologs #723. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 T.chinensis:105

Q75F37              	100.00%		L9KNI7              	100.00%
Bootstrap support for Q75F37 as seed ortholog is 100%.
Bootstrap support for L9KNI7 as seed ortholog is 97%.

Group of orthologs #724. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 T.chinensis:196

Q75BT3              	100.00%		L8YDK6              	100.00%
                    	       		L8Y883              	20.36%
Bootstrap support for Q75BT3 as seed ortholog is 100%.
Bootstrap support for L8YDK6 as seed ortholog is 100%.

Group of orthologs #725. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 T.chinensis:36

Q75EY4              	100.00%		L9L8K0              	100.00%
                    	       		L8Y7Z5              	19.78%
Bootstrap support for Q75EY4 as seed ortholog is 100%.
Bootstrap support for L9L8K0 as seed ortholog is 94%.

Group of orthologs #726. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 T.chinensis:196

Q75CP5              	100.00%		L8YFH0              	100.00%
Bootstrap support for Q75CP5 as seed ortholog is 100%.
Bootstrap support for L8YFH0 as seed ortholog is 100%.

Group of orthologs #727. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.chinensis:90

Q757Z7              	100.00%		L9KN71              	100.00%
                    	       		L9LCJ2              	92.86%
                    	       		L9JD48              	89.01%
                    	       		L9JEK9              	78.02%
                    	       		L9L3W4              	77.47%
                    	       		L8Y8L7              	75.27%
                    	       		L9L2Z9              	69.78%
                    	       		L9L311              	64.29%
                    	       		L8Y1U2              	54.95%
                    	       		L9KIG4              	32.97%
                    	       		L9L9P6              	20.88%
                    	       		L9JN32              	17.58%
                    	       		L9L2M1              	14.84%
                    	       		L9KKP7              	8.24%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for L9KN71 as seed ortholog is 99%.

Group of orthologs #728. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.chinensis:195

Q755M8              	100.00%		L9JDY4              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for L9JDY4 as seed ortholog is 100%.

Group of orthologs #729. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 T.chinensis:107

Q757P1              	100.00%		L9KLE7              	100.00%
Bootstrap support for Q757P1 as seed ortholog is 100%.
Bootstrap support for L9KLE7 as seed ortholog is 99%.

Group of orthologs #730. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 T.chinensis:194

Q75AX1              	100.00%		L8YAP0              	100.00%
Q757K0              	100.00%		L8YB55              	91.67%
Bootstrap support for Q75AX1 as seed ortholog is 100%.
Bootstrap support for Q757K0 as seed ortholog is 100%.
Bootstrap support for L8YAP0 as seed ortholog is 100%.

Group of orthologs #731. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 T.chinensis:43

Q756D1              	100.00%		L8Y5C6              	100.00%
                    	       		L9JCE7              	53.92%
Bootstrap support for Q756D1 as seed ortholog is 100%.
Bootstrap support for L8Y5C6 as seed ortholog is 87%.

Group of orthologs #732. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 T.chinensis:194

Q755H3              	100.00%		L9KK03              	100.00%
                    	       		L9KAY5              	24.71%
Bootstrap support for Q755H3 as seed ortholog is 100%.
Bootstrap support for L9KK03 as seed ortholog is 100%.

Group of orthologs #733. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.chinensis:114

Q759L8              	100.00%		L9LBE6              	100.00%
                    	       		L9LEX7              	76.53%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for L9LBE6 as seed ortholog is 100%.

Group of orthologs #734. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.chinensis:193

Q752X7              	100.00%		L9KN58              	100.00%
Bootstrap support for Q752X7 as seed ortholog is 100%.
Bootstrap support for L9KN58 as seed ortholog is 100%.

Group of orthologs #735. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.chinensis:193

Q754R9              	100.00%		L9L7B7              	100.00%
Bootstrap support for Q754R9 as seed ortholog is 100%.
Bootstrap support for L9L7B7 as seed ortholog is 100%.

Group of orthologs #736. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 T.chinensis:98

Q758I6              	100.00%		L9LC42              	100.00%
Bootstrap support for Q758I6 as seed ortholog is 100%.
Bootstrap support for L9LC42 as seed ortholog is 96%.

Group of orthologs #737. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.chinensis:192

Q75C61              	100.00%		L9JER8              	100.00%
Bootstrap support for Q75C61 as seed ortholog is 100%.
Bootstrap support for L9JER8 as seed ortholog is 100%.

Group of orthologs #738. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.chinensis:192

Q75DM9              	100.00%		L9KKD6              	100.00%
Bootstrap support for Q75DM9 as seed ortholog is 100%.
Bootstrap support for L9KKD6 as seed ortholog is 100%.

Group of orthologs #739. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 T.chinensis:192

Q74ZB1              	100.00%		L9L146              	100.00%
Bootstrap support for Q74ZB1 as seed ortholog is 100%.
Bootstrap support for L9L146 as seed ortholog is 100%.

Group of orthologs #740. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.chinensis:75

Q758L5              	100.00%		L8YFK1              	100.00%
                    	       		L9K8C0              	100.00%
                    	       		L9KYR5              	100.00%
                    	       		L9L8Y0              	100.00%
                    	       		L8Y9P6              	91.49%
                    	       		L9LBA0              	91.49%
                    	       		L9L172              	90.78%
                    	       		L9KFE7              	90.07%
                    	       		L8Y9B8              	88.65%
                    	       		L9KSA1              	88.65%
                    	       		L9LDE5              	88.65%
                    	       		L9L9H9              	87.94%
                    	       		L9LBR6              	85.82%
                    	       		L9KYR4              	85.82%
                    	       		L9KP16              	84.40%
                    	       		L9LFC2              	83.69%
                    	       		L9LE92              	82.98%
                    	       		L9KIL3              	81.56%
                    	       		L9KN82              	81.56%
                    	       		L9JH42              	80.85%
                    	       		L8Y5H3              	80.85%
                    	       		L9KMV4              	80.85%
                    	       		L9L7G8              	76.60%
                    	       		L8YCZ8              	75.18%
                    	       		L8Y0N8              	75.18%
                    	       		L9JWV7              	72.34%
                    	       		L9L628              	71.63%
                    	       		L9L8V5              	70.92%
                    	       		L8Y8Y0              	69.50%
                    	       		L9L3U3              	68.79%
                    	       		L9J9M9              	68.09%
                    	       		L8Y7J1              	66.67%
                    	       		L9KPX5              	65.96%
                    	       		L9KDK6              	63.12%
                    	       		L9JAI4              	63.12%
                    	       		L9KWB8              	58.16%
                    	       		L9JEH5              	56.03%
                    	       		L9JBC6              	55.32%
                    	       		L9KSX6              	55.32%
                    	       		L8Y0I8              	53.19%
                    	       		L8Y522              	53.19%
                    	       		L9KRI0              	52.48%
                    	       		L9KQH6              	51.77%
                    	       		L9L5P9              	51.06%
                    	       		L9JN28              	49.65%
                    	       		L9KFN7              	48.94%
                    	       		L9LB17              	48.23%
                    	       		L9JHJ1              	48.23%
                    	       		L9JB66              	46.81%
                    	       		L9KFU0              	46.81%
                    	       		L9L9V4              	46.81%
                    	       		L9JBF3              	46.10%
                    	       		L9KIG3              	46.10%
                    	       		L8Y2K3              	45.39%
                    	       		L8YBS1              	45.39%
                    	       		L9KJ12              	45.39%
                    	       		L9KNX3              	44.68%
                    	       		L9KY64              	44.68%
                    	       		L9LB29              	43.97%
                    	       		L9KZ36              	43.26%
                    	       		L9LDF3              	43.26%
                    	       		L9LCT1              	43.26%
                    	       		L9L2K6              	42.55%
                    	       		L9LBE2              	41.84%
                    	       		L9LC53              	41.84%
                    	       		L9JAT2              	40.43%
                    	       		L9JDI1              	40.43%
                    	       		L9KMP6              	40.43%
                    	       		L9JRG4              	40.43%
                    	       		L9KVH0              	39.72%
                    	       		L9KPB1              	39.01%
                    	       		L9KRU6              	38.30%
                    	       		L8Y3F5              	38.30%
                    	       		L8Y8W3              	36.88%
                    	       		L9KLY6              	36.88%
                    	       		L9L560              	35.46%
                    	       		L9KZW9              	35.46%
                    	       		L9L438              	34.75%
                    	       		L9L9Q4              	33.33%
                    	       		L9KS22              	31.91%
                    	       		L9L8I2              	31.21%
                    	       		L9L586              	30.50%
                    	       		L9KXZ4              	30.50%
                    	       		L9JEG3              	29.79%
                    	       		L8YEI1              	27.66%
                    	       		L9L7P2              	27.66%
                    	       		L9JYV8              	27.66%
                    	       		L9KBD5              	26.95%
                    	       		L9K2P8              	26.24%
                    	       		L9KI35              	26.24%
                    	       		L9KY71              	25.53%
                    	       		L9KKB5              	24.82%
                    	       		L9KH24              	21.99%
                    	       		L9KY49              	21.99%
                    	       		L9L5B6              	21.99%
                    	       		L9JED6              	21.99%
                    	       		L9KWY9              	21.99%
                    	       		L9KFZ3              	21.28%
                    	       		L9KPV5              	21.28%
                    	       		L9JP73              	19.86%
                    	       		L9KZY1              	19.15%
                    	       		L9L2S2              	19.15%
                    	       		L9KSM2              	19.15%
                    	       		L9KJE4              	17.73%
                    	       		L9KW59              	16.31%
                    	       		L9KVY2              	15.60%
                    	       		L9KJQ8              	14.89%
                    	       		L9K212              	13.48%
                    	       		L9KNX8              	12.77%
                    	       		L9KZE2              	12.77%
                    	       		L9L2T2              	12.77%
                    	       		L9KUV0              	11.35%
                    	       		L9JFT1              	9.93%
                    	       		L9KV24              	9.93%
                    	       		L9L4X2              	7.80%
                    	       		L9L2N1              	7.09%
Bootstrap support for Q758L5 as seed ortholog is 100%.
Bootstrap support for L8YFK1 as seed ortholog is 99%.
Bootstrap support for L9K8C0 as seed ortholog is 99%.
Bootstrap support for L9KYR5 as seed ortholog is 99%.
Bootstrap support for L9L8Y0 as seed ortholog is 99%.

Group of orthologs #741. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.chinensis:191

Q75F96              	100.00%		L9KFY1              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for L9KFY1 as seed ortholog is 100%.

Group of orthologs #742. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 T.chinensis:191

Q75ET1              	100.00%		L9L4C0              	100.00%
Bootstrap support for Q75ET1 as seed ortholog is 100%.
Bootstrap support for L9L4C0 as seed ortholog is 100%.

Group of orthologs #743. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.chinensis:190

Q759F6              	100.00%		L8YGQ7              	100.00%
Bootstrap support for Q759F6 as seed ortholog is 100%.
Bootstrap support for L8YGQ7 as seed ortholog is 100%.

Group of orthologs #744. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 T.chinensis:190

Q75EW8              	100.00%		L8YCC2              	100.00%
Bootstrap support for Q75EW8 as seed ortholog is 100%.
Bootstrap support for L8YCC2 as seed ortholog is 100%.

Group of orthologs #745. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:2

Q754V9              	100.00%		L9KYT0              	100.00%
Bootstrap support for Q754V9 as seed ortholog is 99%.
Bootstrap support for L9KYT0 as seed ortholog is 92%.

Group of orthologs #746. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:190

Q758Y8              	100.00%		L9L7C9              	100.00%
Bootstrap support for Q758Y8 as seed ortholog is 92%.
Bootstrap support for L9L7C9 as seed ortholog is 100%.

Group of orthologs #747. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:66

Q75BA4              	100.00%		L9JEG0              	100.00%
                    	       		L8YEW8              	35.86%
                    	       		L8YCJ4              	34.26%
                    	       		L9JCI0              	29.88%
                    	       		L8YEY0              	9.56%
Bootstrap support for Q75BA4 as seed ortholog is 100%.
Bootstrap support for L9JEG0 as seed ortholog is 99%.

Group of orthologs #748. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 T.chinensis:189

Q75E78              	100.00%		L9KZ44              	100.00%
Bootstrap support for Q75E78 as seed ortholog is 100%.
Bootstrap support for L9KZ44 as seed ortholog is 100%.

Group of orthologs #749. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.chinensis:188

P62583              	100.00%		L8Y6Q7              	100.00%
                    	       		L9KT90              	22.34%
Bootstrap support for P62583 as seed ortholog is 100%.
Bootstrap support for L8Y6Q7 as seed ortholog is 100%.

Group of orthologs #750. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.chinensis:14

Q75BN2              	100.00%		L8YF32              	100.00%
Bootstrap support for Q75BN2 as seed ortholog is 86%.
Bootstrap support for L8YF32 as seed ortholog is 57%.
Alternative seed ortholog is L9L1G6 (14 bits away from this cluster)

Group of orthologs #751. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 T.chinensis:96

Q757K8              	100.00%		L9LD93              	100.00%
Bootstrap support for Q757K8 as seed ortholog is 100%.
Bootstrap support for L9LD93 as seed ortholog is 99%.

Group of orthologs #752. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:106

Q75CB3              	100.00%		L9JAT8              	100.00%
Q753H5              	17.29%		
Bootstrap support for Q75CB3 as seed ortholog is 99%.
Bootstrap support for L9JAT8 as seed ortholog is 99%.

Group of orthologs #753. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 T.chinensis:187

Q754M0              	100.00%		L8Y0U7              	100.00%
Bootstrap support for Q754M0 as seed ortholog is 100%.
Bootstrap support for L8Y0U7 as seed ortholog is 100%.

Group of orthologs #754. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:186

Q757K9              	100.00%		L9JF93              	100.00%
Bootstrap support for Q757K9 as seed ortholog is 79%.
Bootstrap support for L9JF93 as seed ortholog is 100%.

Group of orthologs #755. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 T.chinensis:186

Q75E57              	100.00%		L9JAY2              	100.00%
Bootstrap support for Q75E57 as seed ortholog is 100%.
Bootstrap support for L9JAY2 as seed ortholog is 100%.

Group of orthologs #756. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 T.chinensis:186

Q75C07              	100.00%		L9KM36              	100.00%
Bootstrap support for Q75C07 as seed ortholog is 100%.
Bootstrap support for L9KM36 as seed ortholog is 100%.

Group of orthologs #757. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.chinensis:50

Q751L8              	100.00%		L9KA73              	100.00%
                    	       		L8YDQ6              	39.39%
Bootstrap support for Q751L8 as seed ortholog is 100%.
Bootstrap support for L9KA73 as seed ortholog is 98%.

Group of orthologs #758. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.chinensis:104

Q757A9              	100.00%		L8Y737              	100.00%
Bootstrap support for Q757A9 as seed ortholog is 100%.
Bootstrap support for L8Y737 as seed ortholog is 99%.

Group of orthologs #759. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.chinensis:110

Q74ZW2              	100.00%		L8YEW2              	100.00%
Bootstrap support for Q74ZW2 as seed ortholog is 97%.
Bootstrap support for L8YEW2 as seed ortholog is 99%.

Group of orthologs #760. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 T.chinensis:185

Q75CF2              	100.00%		L8YBE6              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 100%.
Bootstrap support for L8YBE6 as seed ortholog is 100%.

Group of orthologs #761. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:53

Q756N8              	100.00%		L9LC43              	100.00%
Bootstrap support for Q756N8 as seed ortholog is 93%.
Bootstrap support for L9LC43 as seed ortholog is 90%.

Group of orthologs #762. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 T.chinensis:19

Q75A51              	100.00%		L8Y215              	100.00%
                    	       		L9JAZ7              	47.79%
                    	       		L9L897              	18.78%
Bootstrap support for Q75A51 as seed ortholog is 100%.
Bootstrap support for L8Y215 as seed ortholog is 71%.
Alternative seed ortholog is L9KG60 (19 bits away from this cluster)

Group of orthologs #763. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.chinensis:183

Q755S1              	100.00%		L8Y509              	100.00%
Bootstrap support for Q755S1 as seed ortholog is 100%.
Bootstrap support for L8Y509 as seed ortholog is 100%.

Group of orthologs #764. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 T.chinensis:183

Q754D7              	100.00%		L9L9Z0              	100.00%
Bootstrap support for Q754D7 as seed ortholog is 100%.
Bootstrap support for L9L9Z0 as seed ortholog is 100%.

Group of orthologs #765. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 T.chinensis:182

Q75FA8              	100.00%		L8YAX9              	100.00%
                    	       		L8Y3G5              	44.23%
Bootstrap support for Q75FA8 as seed ortholog is 100%.
Bootstrap support for L8YAX9 as seed ortholog is 100%.

Group of orthologs #766. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.chinensis:74

Q757T2              	100.00%		L9KPP8              	100.00%
                    	       		L9L3D5              	37.14%
Bootstrap support for Q757T2 as seed ortholog is 100%.
Bootstrap support for L9KPP8 as seed ortholog is 99%.

Group of orthologs #767. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.chinensis:59

Q75DP0              	100.00%		L9KLE6              	100.00%
                    	       		L9L074              	30.97%
Bootstrap support for Q75DP0 as seed ortholog is 99%.
Bootstrap support for L9KLE6 as seed ortholog is 95%.

Group of orthologs #768. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.chinensis:120

Q758V4              	100.00%		L9KR97              	100.00%
                    	       		L9JBK9              	24.80%
Bootstrap support for Q758V4 as seed ortholog is 92%.
Bootstrap support for L9KR97 as seed ortholog is 99%.

Group of orthologs #769. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 T.chinensis:182

Q753R8              	100.00%		L8Y2V9              	100.00%
Bootstrap support for Q753R8 as seed ortholog is 100%.
Bootstrap support for L8Y2V9 as seed ortholog is 100%.

Group of orthologs #770. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.chinensis:181

Q759V2              	100.00%		L8YFY4              	100.00%
Q75AW2              	14.45%		
Bootstrap support for Q759V2 as seed ortholog is 100%.
Bootstrap support for L8YFY4 as seed ortholog is 100%.

Group of orthologs #771. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.chinensis:181

Q75EG8              	100.00%		L9L449              	100.00%
                    	       		L8Y4E9              	16.33%
Bootstrap support for Q75EG8 as seed ortholog is 100%.
Bootstrap support for L9L449 as seed ortholog is 100%.

Group of orthologs #772. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.chinensis:181

Q755F6              	100.00%		L9KL83              	100.00%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for L9KL83 as seed ortholog is 100%.

Group of orthologs #773. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 T.chinensis:181

Q758W5              	100.00%		L9LB08              	100.00%
Bootstrap support for Q758W5 as seed ortholog is 100%.
Bootstrap support for L9LB08 as seed ortholog is 100%.

Group of orthologs #774. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.chinensis:180

Q75CA3              	100.00%		L8Y7S2              	100.00%
Bootstrap support for Q75CA3 as seed ortholog is 100%.
Bootstrap support for L8Y7S2 as seed ortholog is 100%.

Group of orthologs #775. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.chinensis:180

Q75F43              	100.00%		L8Y5R6              	100.00%
Bootstrap support for Q75F43 as seed ortholog is 100%.
Bootstrap support for L8Y5R6 as seed ortholog is 100%.

Group of orthologs #776. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.chinensis:180

Q759D1              	100.00%		L8YDL6              	100.00%
Bootstrap support for Q759D1 as seed ortholog is 100%.
Bootstrap support for L8YDL6 as seed ortholog is 100%.

Group of orthologs #777. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 T.chinensis:104

Q75E33              	100.00%		L9KZ30              	100.00%
Bootstrap support for Q75E33 as seed ortholog is 100%.
Bootstrap support for L9KZ30 as seed ortholog is 99%.

Group of orthologs #778. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 T.chinensis:41

Q752M3              	100.00%		L8YFV1              	100.00%
                    	       		L8Y9Z3              	60.41%
Bootstrap support for Q752M3 as seed ortholog is 100%.
Bootstrap support for L8YFV1 as seed ortholog is 77%.

Group of orthologs #779. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:179

Q750V1              	100.00%		L9KHS2              	100.00%
                    	       		L8Y195              	45.18%
Bootstrap support for Q750V1 as seed ortholog is 88%.
Bootstrap support for L9KHS2 as seed ortholog is 100%.

Group of orthologs #780. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:64

Q75EB8              	100.00%		L9JBC1              	100.00%
Bootstrap support for Q75EB8 as seed ortholog is 99%.
Bootstrap support for L9JBC1 as seed ortholog is 99%.

Group of orthologs #781. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:19 T.chinensis:179

Q75BY1              	100.00%		L9KGG7              	100.00%
Bootstrap support for Q75BY1 as seed ortholog is 71%.
Alternative seed ortholog is Q753L9 (19 bits away from this cluster)
Bootstrap support for L9KGG7 as seed ortholog is 100%.

Group of orthologs #782. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 T.chinensis:179

Q754L4              	100.00%		L9KZA8              	100.00%
Bootstrap support for Q754L4 as seed ortholog is 100%.
Bootstrap support for L9KZA8 as seed ortholog is 100%.

Group of orthologs #783. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.chinensis:178

Q757G3              	100.00%		L8Y712              	100.00%
Q758B7              	6.91%		
Bootstrap support for Q757G3 as seed ortholog is 100%.
Bootstrap support for L8Y712 as seed ortholog is 100%.

Group of orthologs #784. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.chinensis:29

Q75D46              	100.00%		L8YC74              	100.00%
                    	       		L9L9F3              	31.14%
Bootstrap support for Q75D46 as seed ortholog is 100%.
Bootstrap support for L8YC74 as seed ortholog is 74%.
Alternative seed ortholog is L9KKC2 (29 bits away from this cluster)

Group of orthologs #785. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 T.chinensis:178

Q75BG8              	100.00%		L8Y3N8              	100.00%
Bootstrap support for Q75BG8 as seed ortholog is 100%.
Bootstrap support for L8Y3N8 as seed ortholog is 100%.

Group of orthologs #786. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 T.chinensis:82

Q75DW4              	100.00%		L8YGI8              	100.00%
                    	       		L9KQM9              	54.93%
                    	       		L8YB59              	44.37%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for L8YGI8 as seed ortholog is 99%.

Group of orthologs #787. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:33 T.chinensis:177

Q75B13              	100.00%		L9KMR2              	100.00%
                    	       		L8Y8D7              	10.63%
Bootstrap support for Q75B13 as seed ortholog is 89%.
Bootstrap support for L9KMR2 as seed ortholog is 100%.

Group of orthologs #788. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q751Z8              	100.00%		L9L5L8              	100.00%
                    	       		L9KMM9              	58.25%
                    	       		L9JU37              	38.51%
                    	       		L8Y3I2              	30.16%
                    	       		L9KPV8              	24.09%
                    	       		L8Y6P8              	22.57%
                    	       		L8Y8C4              	19.94%
Bootstrap support for Q751Z8 as seed ortholog is 100%.
Bootstrap support for L9L5L8 as seed ortholog is 100%.

Group of orthologs #789. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q753V1              	100.00%		L9JJ46              	100.00%
Q75C79              	38.39%		L8Y902              	38.41%
Q75AS9              	31.54%		
Bootstrap support for Q753V1 as seed ortholog is 100%.
Bootstrap support for L9JJ46 as seed ortholog is 100%.

Group of orthologs #790. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:126

Q75C99              	100.00%		L9JDD5              	100.00%
                    	       		L9KQF1              	23.41%
                    	       		L9JI08              	8.99%
Bootstrap support for Q75C99 as seed ortholog is 84%.
Bootstrap support for L9JDD5 as seed ortholog is 99%.

Group of orthologs #791. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:58

Q751G7              	100.00%		L8Y4H2              	100.00%
Bootstrap support for Q751G7 as seed ortholog is 99%.
Bootstrap support for L8Y4H2 as seed ortholog is 97%.

Group of orthologs #792. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q757A4              	100.00%		L8Y6A4              	100.00%
Bootstrap support for Q757A4 as seed ortholog is 100%.
Bootstrap support for L8Y6A4 as seed ortholog is 100%.

Group of orthologs #793. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q75AY5              	100.00%		L9KFA4              	100.00%
Bootstrap support for Q75AY5 as seed ortholog is 100%.
Bootstrap support for L9KFA4 as seed ortholog is 100%.

Group of orthologs #794. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q756E0              	100.00%		L9KLG4              	100.00%
Bootstrap support for Q756E0 as seed ortholog is 100%.
Bootstrap support for L9KLG4 as seed ortholog is 100%.

Group of orthologs #795. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q759W2              	100.00%		L9KPZ3              	100.00%
Bootstrap support for Q759W2 as seed ortholog is 100%.
Bootstrap support for L9KPZ3 as seed ortholog is 100%.

Group of orthologs #796. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:106

Q753I2              	100.00%		L9KWH9              	100.00%
Bootstrap support for Q753I2 as seed ortholog is 100%.
Bootstrap support for L9KWH9 as seed ortholog is 99%.

Group of orthologs #797. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 T.chinensis:176

Q755G8              	100.00%		L9L7A8              	100.00%
Bootstrap support for Q755G8 as seed ortholog is 100%.
Bootstrap support for L9L7A8 as seed ortholog is 100%.

Group of orthologs #798. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 T.chinensis:175

Q75BB1              	100.00%		L9KSN1              	100.00%
                    	       		L9KKW4              	9.01%
Bootstrap support for Q75BB1 as seed ortholog is 100%.
Bootstrap support for L9KSN1 as seed ortholog is 100%.

Group of orthologs #799. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 T.chinensis:175

Q75AB1              	100.00%		L8Y795              	100.00%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for L8Y795 as seed ortholog is 100%.

Group of orthologs #800. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 T.chinensis:33

Q750D3              	100.00%		L9JDC4              	100.00%
Bootstrap support for Q750D3 as seed ortholog is 100%.
Bootstrap support for L9JDC4 as seed ortholog is 90%.

Group of orthologs #801. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:46

Q754E6              	100.00%		L9JDQ3              	100.00%
Bootstrap support for Q754E6 as seed ortholog is 99%.
Bootstrap support for L9JDQ3 as seed ortholog is 97%.

Group of orthologs #802. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 T.chinensis:175

Q755I0              	100.00%		L9KYH2              	100.00%
Bootstrap support for Q755I0 as seed ortholog is 100%.
Bootstrap support for L9KYH2 as seed ortholog is 100%.

Group of orthologs #803. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.chinensis:92

Q75B62              	100.00%		L8Y2T2              	100.00%
                    	       		L9L9V7              	78.95%
                    	       		L9J9P2              	77.99%
                    	       		L9KWY6              	69.86%
                    	       		L9JEK1              	65.55%
                    	       		L8Y2E7              	64.11%
                    	       		L9JU32              	62.20%
                    	       		L9LGA4              	61.24%
                    	       		L9KZZ0              	60.77%
                    	       		L9KIB7              	51.67%
                    	       		L9LBC7              	50.24%
                    	       		L9KNJ9              	15.79%
                    	       		L9KYN9              	14.35%
                    	       		L9L340              	13.40%
                    	       		L9L5G6              	11.48%
                    	       		L9LFZ2              	10.05%
                    	       		L8Y4C8              	5.74%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for L8Y2T2 as seed ortholog is 99%.

Group of orthologs #804. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.chinensis:174

Q751M2              	100.00%		L9JB16              	100.00%
Q757Z2              	13.54%		
Q751M3              	6.16%		
Bootstrap support for Q751M2 as seed ortholog is 100%.
Bootstrap support for L9JB16 as seed ortholog is 100%.

Group of orthologs #805. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.chinensis:174

Q751S7              	100.00%		L9KL68              	100.00%
                    	       		L9KMJ9              	30.93%
Bootstrap support for Q751S7 as seed ortholog is 90%.
Bootstrap support for L9KL68 as seed ortholog is 100%.

Group of orthologs #806. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.chinensis:174

Q75AW4              	100.00%		L9JBZ5              	100.00%
Bootstrap support for Q75AW4 as seed ortholog is 100%.
Bootstrap support for L9JBZ5 as seed ortholog is 100%.

Group of orthologs #807. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.chinensis:174

Q75AV6              	100.00%		L9KY87              	100.00%
Bootstrap support for Q75AV6 as seed ortholog is 100%.
Bootstrap support for L9KY87 as seed ortholog is 100%.

Group of orthologs #808. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 T.chinensis:174

Q75BJ3              	100.00%		L9KYD5              	100.00%
Bootstrap support for Q75BJ3 as seed ortholog is 100%.
Bootstrap support for L9KYD5 as seed ortholog is 100%.

Group of orthologs #809. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 T.chinensis:173

Q754M7              	100.00%		L9LAM6              	100.00%
                    	       		L9KSW8              	20.33%
                    	       		L9KND4              	18.20%
                    	       		L9JBV7              	11.15%
                    	       		L9JCH7              	9.34%
                    	       		L9JBU6              	7.38%
Bootstrap support for Q754M7 as seed ortholog is 100%.
Bootstrap support for L9LAM6 as seed ortholog is 100%.

Group of orthologs #810. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 T.chinensis:173

Q759T2              	100.00%		L8YE27              	100.00%
                    	       		L9L719              	74.86%
Bootstrap support for Q759T2 as seed ortholog is 100%.
Bootstrap support for L8YE27 as seed ortholog is 100%.

Group of orthologs #811. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:35

Q756N2              	100.00%		L8YEW1              	100.00%
Bootstrap support for Q756N2 as seed ortholog is 98%.
Bootstrap support for L8YEW1 as seed ortholog is 75%.

Group of orthologs #812. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.chinensis:44

Q75AT6              	100.00%		L8YAW2              	100.00%
                    	       		L9JKY2              	52.54%
                    	       		L9LCM1              	45.76%
                    	       		L9L3F0              	40.11%
                    	       		L9KWA0              	38.42%
                    	       		L9KRF3              	36.72%
                    	       		L9KT99              	32.20%
                    	       		L8YDT2              	31.64%
                    	       		L9KLV3              	28.25%
                    	       		L9KMD5              	25.99%
                    	       		L8Y472              	24.29%
                    	       		L9KMG5              	20.90%
                    	       		L9LGC5              	19.77%
                    	       		L9JC63              	19.21%
                    	       		L9L086              	16.38%
                    	       		L9KTY9              	11.86%
                    	       		L9KFL3              	11.86%
                    	       		L9L729              	10.73%
                    	       		L9JAQ3              	5.08%
Bootstrap support for Q75AT6 as seed ortholog is 100%.
Bootstrap support for L8YAW2 as seed ortholog is 93%.

Group of orthologs #813. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.chinensis:172

Q755S7              	100.00%		L8Y767              	100.00%
                    	       		L9KLZ4              	33.62%
                    	       		L9KTJ6              	22.67%
Bootstrap support for Q755S7 as seed ortholog is 100%.
Bootstrap support for L8Y767 as seed ortholog is 100%.

Group of orthologs #814. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:172

Q75E96              	100.00%		L9L777              	100.00%
                    	       		L8Y5L6              	21.61%
Bootstrap support for Q75E96 as seed ortholog is 98%.
Bootstrap support for L9L777 as seed ortholog is 100%.

Group of orthologs #815. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.chinensis:106

Q754D9              	100.00%		L8Y456              	100.00%
Bootstrap support for Q754D9 as seed ortholog is 97%.
Bootstrap support for L8Y456 as seed ortholog is 99%.

Group of orthologs #816. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.chinensis:34

Q758G3              	100.00%		L9JB65              	100.00%
Bootstrap support for Q758G3 as seed ortholog is 99%.
Bootstrap support for L9JB65 as seed ortholog is 78%.

Group of orthologs #817. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 T.chinensis:172

Q75B77              	100.00%		L9LA36              	100.00%
Bootstrap support for Q75B77 as seed ortholog is 100%.
Bootstrap support for L9LA36 as seed ortholog is 100%.

Group of orthologs #818. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 T.chinensis:61

Q74ZL5              	100.00%		L8Y2Z5              	100.00%
Q8J1F8              	65.82%		L8YGC5              	100.00%
                    	       		L9KXB8              	100.00%
                    	       		L8YEH0              	97.37%
                    	       		L8YET9              	97.37%
                    	       		L8Y8T8              	96.05%
                    	       		L9KXY8              	96.00%
                    	       		L8YEV0              	94.74%
                    	       		L8YAS3              	92.11%
                    	       		L8YGC1              	77.63%
                    	       		L8YET4              	71.05%
Bootstrap support for Q74ZL5 as seed ortholog is 100%.
Bootstrap support for L8Y2Z5 as seed ortholog is 99%.
Bootstrap support for L8YGC5 as seed ortholog is 99%.
Bootstrap support for L9KXB8 as seed ortholog is 100%.

Group of orthologs #819. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 T.chinensis:171

Q75E60              	100.00%		L8Y987              	100.00%
                    	       		L9JTC7              	69.16%
                    	       		L8Y7B4              	64.32%
                    	       		L9KNN9              	48.90%
                    	       		L9LDJ3              	44.05%
Bootstrap support for Q75E60 as seed ortholog is 100%.
Bootstrap support for L8Y987 as seed ortholog is 100%.

Group of orthologs #820. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 T.chinensis:171

Q752B2              	100.00%		L8Y7X2              	100.00%
Bootstrap support for Q752B2 as seed ortholog is 100%.
Bootstrap support for L8Y7X2 as seed ortholog is 100%.

Group of orthologs #821. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 T.chinensis:171

Q756F7              	100.00%		L9KX07              	100.00%
Bootstrap support for Q756F7 as seed ortholog is 100%.
Bootstrap support for L9KX07 as seed ortholog is 100%.

Group of orthologs #822. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:59

Q75AT0              	100.00%		L9KLY1              	100.00%
                    	       		L8Y631              	50.74%
                    	       		L9KNQ5              	49.26%
                    	       		L8Y483              	25.79%
                    	       		L8Y9E7              	24.74%
                    	       		L9L8T2              	23.47%
                    	       		L9KU33              	20.08%
                    	       		L8YB41              	19.45%
                    	       		L9L4Y3              	19.45%
                    	       		L8Y7W0              	16.70%
                    	       		L9L0Z7              	11.21%
                    	       		L8YAH4              	10.15%
Bootstrap support for Q75AT0 as seed ortholog is 99%.
Bootstrap support for L9KLY1 as seed ortholog is 92%.

Group of orthologs #823. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 T.chinensis:170

Q750D1              	100.00%		L9KUW8              	100.00%
Bootstrap support for Q750D1 as seed ortholog is 100%.
Bootstrap support for L9KUW8 as seed ortholog is 100%.

Group of orthologs #824. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 T.chinensis:170

Q75BW2              	100.00%		L9KUV4              	100.00%
Bootstrap support for Q75BW2 as seed ortholog is 100%.
Bootstrap support for L9KUV4 as seed ortholog is 100%.

Group of orthologs #825. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 T.chinensis:169

Q75EK7              	100.00%		L9JJ64              	100.00%
Bootstrap support for Q75EK7 as seed ortholog is 100%.
Bootstrap support for L9JJ64 as seed ortholog is 100%.

Group of orthologs #826. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.chinensis:48

Q754N8              	100.00%		L9J9L2              	100.00%
                    	       		L8YA09              	84.21%
                    	       		L8Y9U4              	78.95%
                    	       		L9L4D7              	73.68%
                    	       		L9L1U9              	71.93%
                    	       		L8Y697              	56.14%
                    	       		L9JGB8              	56.14%
                    	       		L9JHS3              	49.12%
                    	       		L9L4B8              	49.12%
                    	       		L9JB39              	47.37%
                    	       		L9JC44              	47.37%
                    	       		L9KK67              	40.35%
                    	       		L8YGK9              	35.09%
                    	       		L9L078              	29.82%
                    	       		L9LFX9              	22.81%
                    	       		L9LCU5              	7.02%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for L9J9L2 as seed ortholog is 99%.

Group of orthologs #827. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.chinensis:78

Q74ZU7              	100.00%		L9K780              	100.00%
Q75BP5              	28.36%		
Bootstrap support for Q74ZU7 as seed ortholog is 100%.
Bootstrap support for L9K780 as seed ortholog is 95%.

Group of orthologs #828. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.chinensis:168

Q74Z88              	100.00%		L9JLR9              	100.00%
Bootstrap support for Q74Z88 as seed ortholog is 100%.
Bootstrap support for L9JLR9 as seed ortholog is 100%.

Group of orthologs #829. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.chinensis:168

Q752B3              	100.00%		L9KP54              	100.00%
Bootstrap support for Q752B3 as seed ortholog is 100%.
Bootstrap support for L9KP54 as seed ortholog is 100%.

Group of orthologs #830. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 T.chinensis:168

Q75D36              	100.00%		L9LAI0              	100.00%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for L9LAI0 as seed ortholog is 100%.

Group of orthologs #831. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 T.chinensis:167

Q759H8              	100.00%		L8Y4P9              	100.00%
                    	       		L9KFG1              	93.57%
Bootstrap support for Q759H8 as seed ortholog is 100%.
Bootstrap support for L8Y4P9 as seed ortholog is 100%.

Group of orthologs #832. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.chinensis:118

Q757U3              	100.00%		L8Y8K9              	100.00%
Bootstrap support for Q757U3 as seed ortholog is 99%.
Bootstrap support for L8Y8K9 as seed ortholog is 99%.

Group of orthologs #833. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 T.chinensis:80

Q75AV7              	100.00%		L9JA32              	100.00%
Bootstrap support for Q75AV7 as seed ortholog is 100%.
Bootstrap support for L9JA32 as seed ortholog is 99%.

Group of orthologs #834. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.chinensis:76

Q75F38              	100.00%		L9JPL9              	100.00%
Bootstrap support for Q75F38 as seed ortholog is 100%.
Bootstrap support for L9JPL9 as seed ortholog is 99%.

Group of orthologs #835. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 T.chinensis:167

Q75DF7              	100.00%		L9LCW1              	100.00%
Bootstrap support for Q75DF7 as seed ortholog is 100%.
Bootstrap support for L9LCW1 as seed ortholog is 100%.

Group of orthologs #836. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.chinensis:166

Q75D68              	100.00%		L9L7S0              	100.00%
                    	       		L8Y995              	44.47%
Bootstrap support for Q75D68 as seed ortholog is 100%.
Bootstrap support for L9L7S0 as seed ortholog is 100%.

Group of orthologs #837. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.chinensis:166

Q751B5              	100.00%		L9KHQ7              	100.00%
Bootstrap support for Q751B5 as seed ortholog is 100%.
Bootstrap support for L9KHQ7 as seed ortholog is 100%.

Group of orthologs #838. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.chinensis:166

Q759Q8              	100.00%		L9JLR4              	100.00%
Bootstrap support for Q759Q8 as seed ortholog is 100%.
Bootstrap support for L9JLR4 as seed ortholog is 100%.

Group of orthologs #839. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.chinensis:107

Q75C73              	100.00%		L9KI79              	100.00%
Bootstrap support for Q75C73 as seed ortholog is 100%.
Bootstrap support for L9KI79 as seed ortholog is 99%.

Group of orthologs #840. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 T.chinensis:166

E7FHS1              	100.00%		L9L3A2              	100.00%
Bootstrap support for E7FHS1 as seed ortholog is 100%.
Bootstrap support for L9L3A2 as seed ortholog is 100%.

Group of orthologs #841. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.chinensis:165

Q75E32              	100.00%		L9JC54              	100.00%
                    	       		L9JD97              	31.48%
                    	       		L9K2V4              	30.86%
Bootstrap support for Q75E32 as seed ortholog is 100%.
Bootstrap support for L9JC54 as seed ortholog is 100%.

Group of orthologs #842. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.chinensis:165

Q753N8              	100.00%		L9KL49              	100.00%
Bootstrap support for Q753N8 as seed ortholog is 100%.
Bootstrap support for L9KL49 as seed ortholog is 100%.

Group of orthologs #843. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.chinensis:165

Q74ZA3              	100.00%		L9KSV2              	100.00%
Bootstrap support for Q74ZA3 as seed ortholog is 100%.
Bootstrap support for L9KSV2 as seed ortholog is 100%.

Group of orthologs #844. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 T.chinensis:165

Q75AM4              	100.00%		L9L030              	100.00%
Bootstrap support for Q75AM4 as seed ortholog is 100%.
Bootstrap support for L9L030 as seed ortholog is 100%.

Group of orthologs #845. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:106

Q75CK2              	100.00%		L8YI22              	100.00%
                    	       		L9K1W4              	35.99%
Bootstrap support for Q75CK2 as seed ortholog is 97%.
Bootstrap support for L8YI22 as seed ortholog is 98%.

Group of orthologs #846. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.chinensis:163

Q753H7              	100.00%		L8Y7Q8              	100.00%
Bootstrap support for Q753H7 as seed ortholog is 100%.
Bootstrap support for L8Y7Q8 as seed ortholog is 100%.

Group of orthologs #847. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.chinensis:163

Q759U2              	100.00%		L9JBI4              	100.00%
Bootstrap support for Q759U2 as seed ortholog is 100%.
Bootstrap support for L9JBI4 as seed ortholog is 100%.

Group of orthologs #848. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.chinensis:163

Q75EG3              	100.00%		L9JCL6              	100.00%
Bootstrap support for Q75EG3 as seed ortholog is 100%.
Bootstrap support for L9JCL6 as seed ortholog is 100%.

Group of orthologs #849. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 T.chinensis:163

Q755N5              	100.00%		L9KVB7              	100.00%
Bootstrap support for Q755N5 as seed ortholog is 100%.
Bootstrap support for L9KVB7 as seed ortholog is 100%.

Group of orthologs #850. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.chinensis:162

Q750P3              	100.00%		L9K0A4              	100.00%
                    	       		L9LDG4              	54.74%
Bootstrap support for Q750P3 as seed ortholog is 100%.
Bootstrap support for L9K0A4 as seed ortholog is 100%.

Group of orthologs #851. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.chinensis:44

Q74ZE3              	100.00%		L9J9A8              	100.00%
Bootstrap support for Q74ZE3 as seed ortholog is 100%.
Bootstrap support for L9J9A8 as seed ortholog is 74%.
Alternative seed ortholog is L9L4F2 (44 bits away from this cluster)

Group of orthologs #852. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.chinensis:95

Q759L2              	100.00%		L9JHR8              	100.00%
Bootstrap support for Q759L2 as seed ortholog is 100%.
Bootstrap support for L9JHR8 as seed ortholog is 99%.

Group of orthologs #853. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 T.chinensis:162

Q756U0              	100.00%		L9KI06              	100.00%
Bootstrap support for Q756U0 as seed ortholog is 100%.
Bootstrap support for L9KI06 as seed ortholog is 100%.

Group of orthologs #854. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:162

Q75C67              	100.00%		L9KPQ3              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 100%.
Bootstrap support for L9KPQ3 as seed ortholog is 100%.

Group of orthologs #855. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.chinensis:69

Q751I7              	100.00%		L9J8X1              	100.00%
                    	       		L8Y4L3              	91.96%
                    	       		L9KV96              	88.39%
                    	       		L8YCC1              	52.68%
                    	       		L9K641              	34.82%
                    	       		L9L2S3              	24.11%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for L9J8X1 as seed ortholog is 99%.

Group of orthologs #856. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.chinensis:161

Q75DK9              	100.00%		L9L1D6              	100.00%
                    	       		L9KPR8              	36.14%
                    	       		L9KBI5              	33.33%
Bootstrap support for Q75DK9 as seed ortholog is 100%.
Bootstrap support for L9L1D6 as seed ortholog is 100%.

Group of orthologs #857. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.chinensis:161

Q759X7              	100.00%		L9LE64              	100.00%
                    	       		L9L0C5              	23.52%
Bootstrap support for Q759X7 as seed ortholog is 100%.
Bootstrap support for L9LE64 as seed ortholog is 100%.

Group of orthologs #858. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 T.chinensis:161

Q75D79              	100.00%		L8YFZ6              	100.00%
Bootstrap support for Q75D79 as seed ortholog is 100%.
Bootstrap support for L8YFZ6 as seed ortholog is 100%.

Group of orthologs #859. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.chinensis:160

Q752A6              	100.00%		L9L1X1              	100.00%
Q753L1              	7.42%		L9KY68              	63.68%
Q751Q3              	5.52%		L8YHU4              	12.48%
                    	       		L8Y7A8              	10.75%
                    	       		L9JF36              	7.59%
                    	       		L9JA12              	7.54%
Bootstrap support for Q752A6 as seed ortholog is 100%.
Bootstrap support for L9L1X1 as seed ortholog is 100%.

Group of orthologs #860. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.chinensis:68

Q753B1              	100.00%		L9JVX2              	100.00%
                    	       		L9L6R9              	83.48%
                    	       		L9JHF6              	80.00%
                    	       		L8YB11              	79.13%
                    	       		L8YEN6              	39.13%
                    	       		L9KFX6              	27.83%
Bootstrap support for Q753B1 as seed ortholog is 100%.
Bootstrap support for L9JVX2 as seed ortholog is 99%.

Group of orthologs #861. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.chinensis:160

Q74ZD2              	100.00%		L8YBE1              	100.00%
Bootstrap support for Q74ZD2 as seed ortholog is 100%.
Bootstrap support for L8YBE1 as seed ortholog is 100%.

Group of orthologs #862. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.chinensis:160

Q75FB4              	100.00%		L9KPE5              	100.00%
Bootstrap support for Q75FB4 as seed ortholog is 100%.
Bootstrap support for L9KPE5 as seed ortholog is 100%.

Group of orthologs #863. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.chinensis:160

Q756R5              	100.00%		L9L8Z7              	100.00%
Bootstrap support for Q756R5 as seed ortholog is 100%.
Bootstrap support for L9L8Z7 as seed ortholog is 100%.

Group of orthologs #864. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 T.chinensis:160

Q752C6              	100.00%		L9LCY4              	100.00%
Bootstrap support for Q752C6 as seed ortholog is 100%.
Bootstrap support for L9LCY4 as seed ortholog is 100%.

Group of orthologs #865. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.chinensis:159

Q75EA2              	100.00%		L8Y0B1              	100.00%
Bootstrap support for Q75EA2 as seed ortholog is 100%.
Bootstrap support for L8Y0B1 as seed ortholog is 100%.

Group of orthologs #866. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.chinensis:159

Q752X9              	100.00%		L8YD89              	100.00%
Bootstrap support for Q752X9 as seed ortholog is 100%.
Bootstrap support for L8YD89 as seed ortholog is 100%.

Group of orthologs #867. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 T.chinensis:159

Q74ZN3              	100.00%		L9L3S5              	100.00%
Bootstrap support for Q74ZN3 as seed ortholog is 100%.
Bootstrap support for L9L3S5 as seed ortholog is 100%.

Group of orthologs #868. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.chinensis:75

Q75A17              	100.00%		L9KLJ1              	100.00%
                    	       		L9L924              	44.22%
Bootstrap support for Q75A17 as seed ortholog is 100%.
Bootstrap support for L9KLJ1 as seed ortholog is 97%.

Group of orthologs #869. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.chinensis:158

Q75EQ5              	100.00%		L9KTV9              	100.00%
                    	       		L8YFF3              	36.54%
Bootstrap support for Q75EQ5 as seed ortholog is 100%.
Bootstrap support for L9KTV9 as seed ortholog is 100%.

Group of orthologs #870. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.chinensis:158

Q752Z0              	100.00%		L8YCQ4              	100.00%
Bootstrap support for Q752Z0 as seed ortholog is 100%.
Bootstrap support for L8YCQ4 as seed ortholog is 100%.

Group of orthologs #871. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.chinensis:158

Q751W0              	100.00%		L9JK93              	100.00%
Bootstrap support for Q751W0 as seed ortholog is 98%.
Bootstrap support for L9JK93 as seed ortholog is 100%.

Group of orthologs #872. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 T.chinensis:158

Q754J0              	100.00%		L9KRC0              	100.00%
Bootstrap support for Q754J0 as seed ortholog is 100%.
Bootstrap support for L9KRC0 as seed ortholog is 100%.

Group of orthologs #873. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.chinensis:35

Q757I9              	100.00%		L8Y899              	100.00%
Bootstrap support for Q757I9 as seed ortholog is 100%.
Bootstrap support for L8Y899 as seed ortholog is 91%.

Group of orthologs #874. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.chinensis:157

Q753W2              	100.00%		L9JS80              	100.00%
Bootstrap support for Q753W2 as seed ortholog is 100%.
Bootstrap support for L9JS80 as seed ortholog is 100%.

Group of orthologs #875. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 T.chinensis:38

Q757B7              	100.00%		L9KMU4              	100.00%
Bootstrap support for Q757B7 as seed ortholog is 100%.
Bootstrap support for L9KMU4 as seed ortholog is 93%.

Group of orthologs #876. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.chinensis:156

Q753X8              	100.00%		L9KRB6              	100.00%
                    	       		L9L507              	94.05%
                    	       		L8YCY2              	84.52%
                    	       		L8Y4Y8              	82.14%
                    	       		L9KQ12              	67.86%
                    	       		L9JBE8              	23.81%
                    	       		L8YI34              	14.29%
Bootstrap support for Q753X8 as seed ortholog is 100%.
Bootstrap support for L9KRB6 as seed ortholog is 100%.

Group of orthologs #877. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.chinensis:156

Q754X2              	100.00%		L8Y015              	100.00%
Bootstrap support for Q754X2 as seed ortholog is 100%.
Bootstrap support for L8Y015 as seed ortholog is 100%.

Group of orthologs #878. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.chinensis:156

Q750F6              	100.00%		L8Y641              	100.00%
Bootstrap support for Q750F6 as seed ortholog is 100%.
Bootstrap support for L8Y641 as seed ortholog is 100%.

Group of orthologs #879. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.chinensis:89

Q756D0              	100.00%		L9KNH7              	100.00%
Bootstrap support for Q756D0 as seed ortholog is 100%.
Bootstrap support for L9KNH7 as seed ortholog is 95%.

Group of orthologs #880. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 T.chinensis:156

Q75EF9              	100.00%		L9L170              	100.00%
Bootstrap support for Q75EF9 as seed ortholog is 100%.
Bootstrap support for L9L170 as seed ortholog is 100%.

Group of orthologs #881. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:155

Q752G1              	100.00%		L9KGZ7              	100.00%
                    	       		L9KR20              	28.24%
Bootstrap support for Q752G1 as seed ortholog is 100%.
Bootstrap support for L9KGZ7 as seed ortholog is 100%.

Group of orthologs #882. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:155

Q75B07              	100.00%		L9JDG8              	100.00%
Bootstrap support for Q75B07 as seed ortholog is 100%.
Bootstrap support for L9JDG8 as seed ortholog is 100%.

Group of orthologs #883. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:155

Q752R9              	100.00%		L9KZ13              	100.00%
Bootstrap support for Q752R9 as seed ortholog is 100%.
Bootstrap support for L9KZ13 as seed ortholog is 100%.

Group of orthologs #884. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 T.chinensis:155

Q757N7              	100.00%		L9LDW8              	100.00%
Bootstrap support for Q757N7 as seed ortholog is 100%.
Bootstrap support for L9LDW8 as seed ortholog is 100%.

Group of orthologs #885. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 T.chinensis:154

Q754C9              	100.00%		L9KQZ5              	100.00%
Bootstrap support for Q754C9 as seed ortholog is 100%.
Bootstrap support for L9KQZ5 as seed ortholog is 100%.

Group of orthologs #886. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.chinensis:153

Q755Y7              	100.00%		L9KNI0              	100.00%
Q75C65              	15.25%		L9KNM1              	56.43%
                    	       		L9KPG4              	34.41%
Bootstrap support for Q755Y7 as seed ortholog is 99%.
Bootstrap support for L9KNI0 as seed ortholog is 100%.

Group of orthologs #887. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:153

Q752A4              	100.00%		L8Y2S6              	100.00%
                    	       		L8Y359              	36.45%
                    	       		L8Y3W3              	21.18%
Bootstrap support for Q752A4 as seed ortholog is 73%.
Alternative seed ortholog is Q75AX5 (27 bits away from this cluster)
Bootstrap support for L8Y2S6 as seed ortholog is 100%.

Group of orthologs #888. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.chinensis:15

Q753F2              	100.00%		L8YDC9              	100.00%
                    	       		L8Y4B5              	12.63%
Bootstrap support for Q753F2 as seed ortholog is 100%.
Bootstrap support for L8YDC9 as seed ortholog is 88%.

Group of orthologs #889. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.chinensis:153

Q75BW7              	100.00%		L9JW49              	100.00%
                    	       		L9JG00              	30.13%
Bootstrap support for Q75BW7 as seed ortholog is 100%.
Bootstrap support for L9JW49 as seed ortholog is 100%.

Group of orthologs #890. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.chinensis:47

Q751X9              	100.00%		L9KM12              	100.00%
Bootstrap support for Q751X9 as seed ortholog is 100%.
Bootstrap support for L9KM12 as seed ortholog is 81%.

Group of orthologs #891. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 T.chinensis:153

Q759W4              	100.00%		L9KJC0              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for L9KJC0 as seed ortholog is 100%.

Group of orthologs #892. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.chinensis:153

Q75B80              	100.00%		L9L1Y2              	100.00%
Bootstrap support for Q75B80 as seed ortholog is 99%.
Bootstrap support for L9L1Y2 as seed ortholog is 100%.

Group of orthologs #893. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:36 T.chinensis:26

Q756H4              	100.00%		L9L8P6              	100.00%
                    	       		L9L805              	46.60%
                    	       		L9KVX0              	43.14%
                    	       		L9KV99              	41.68%
                    	       		L9KUY7              	32.98%
                    	       		L9L7C8              	6.39%
Bootstrap support for Q756H4 as seed ortholog is 77%.
Bootstrap support for L9L8P6 as seed ortholog is 70%.
Alternative seed ortholog is L8Y5H1 (26 bits away from this cluster)

Group of orthologs #894. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.chinensis:152

Q754T6              	100.00%		L8Y8J4              	100.00%
                    	       		L9KQT0              	28.26%
Bootstrap support for Q754T6 as seed ortholog is 100%.
Bootstrap support for L8Y8J4 as seed ortholog is 100%.

Group of orthologs #895. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 T.chinensis:152

Q75ET0              	100.00%		L8YGF7              	100.00%
Bootstrap support for Q75ET0 as seed ortholog is 100%.
Bootstrap support for L8YGF7 as seed ortholog is 100%.

Group of orthologs #896. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:69

Q75CG2              	100.00%		L9KWT0              	100.00%
                    	       		L9K1S3              	69.11%
                    	       		L9KWH4              	67.48%
                    	       		L9JB67              	64.23%
                    	       		L9JIB0              	61.79%
                    	       		L9JBH3              	56.10%
                    	       		L9KSD3              	54.47%
                    	       		L9JII1              	50.41%
                    	       		L9KJT6              	49.59%
                    	       		L9KF13              	43.09%
                    	       		L8YCY4              	40.65%
                    	       		L9JRZ0              	39.84%
                    	       		L8YAW0              	39.84%
                    	       		L9L961              	39.02%
                    	       		L9KU89              	34.96%
                    	       		L9L9L5              	34.15%
                    	       		L8YA16              	32.52%
                    	       		L8Y0L7              	28.46%
                    	       		L8Y7F8              	24.39%
                    	       		L9KLR0              	24.39%
                    	       		L9JZE3              	22.76%
                    	       		L9KGU7              	18.70%
                    	       		L9KGE8              	14.63%
                    	       		L9L6X2              	13.82%
                    	       		L8Y8X9              	12.20%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for L9KWT0 as seed ortholog is 99%.

Group of orthologs #897. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:99

Q754W7              	100.00%		L9JKF2              	100.00%
                    	       		L9L9J9              	56.98%
Bootstrap support for Q754W7 as seed ortholog is 100%.
Bootstrap support for L9JKF2 as seed ortholog is 100%.

Group of orthologs #898. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:151

Q753H0              	100.00%		L9KK29              	100.00%
                    	       		L9KNL8              	42.32%
Bootstrap support for Q753H0 as seed ortholog is 100%.
Bootstrap support for L9KK29 as seed ortholog is 100%.

Group of orthologs #899. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:151

Q751M1              	100.00%		L9L2V9              	100.00%
Bootstrap support for Q751M1 as seed ortholog is 100%.
Bootstrap support for L9L2V9 as seed ortholog is 100%.

Group of orthologs #900. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 T.chinensis:151

Q75ED1              	100.00%		L9L3R1              	100.00%
Bootstrap support for Q75ED1 as seed ortholog is 100%.
Bootstrap support for L9L3R1 as seed ortholog is 100%.

Group of orthologs #901. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.chinensis:68

Q75CV0              	100.00%		L9JS61              	100.00%
                    	       		L9JG89              	97.86%
                    	       		L9KXB0              	48.57%
                    	       		L9JZZ5              	25.71%
                    	       		L9JNH2              	22.14%
                    	       		L9JE47              	21.43%
                    	       		L9JGN2              	21.43%
                    	       		L9JA38              	12.86%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for L9JS61 as seed ortholog is 99%.

Group of orthologs #902. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.chinensis:150

Q756E6              	100.00%		L9KJC5              	100.00%
                    	       		L8YBI9              	55.46%
                    	       		L8Y3M1              	23.53%
Bootstrap support for Q756E6 as seed ortholog is 100%.
Bootstrap support for L9KJC5 as seed ortholog is 100%.

Group of orthologs #903. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.chinensis:150

Q757L0              	100.00%		L9KPP9              	100.00%
                    	       		L9KKM6              	30.03%
Bootstrap support for Q757L0 as seed ortholog is 100%.
Bootstrap support for L9KPP9 as seed ortholog is 100%.

Group of orthologs #904. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.chinensis:150

Q75CL0              	100.00%		L8YC65              	100.00%
Bootstrap support for Q75CL0 as seed ortholog is 100%.
Bootstrap support for L8YC65 as seed ortholog is 100%.

Group of orthologs #905. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.chinensis:96

Q750X9              	100.00%		L9L353              	100.00%
Bootstrap support for Q750X9 as seed ortholog is 98%.
Bootstrap support for L9L353 as seed ortholog is 99%.

Group of orthologs #906. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 T.chinensis:150

Q752H6              	100.00%		L9L4A5              	100.00%
Bootstrap support for Q752H6 as seed ortholog is 100%.
Bootstrap support for L9L4A5 as seed ortholog is 100%.

Group of orthologs #907. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:149

Q75EZ1              	100.00%		L9KIR0              	100.00%
Q757W1              	17.54%		
Q756M0              	17.00%		
Bootstrap support for Q75EZ1 as seed ortholog is 100%.
Bootstrap support for L9KIR0 as seed ortholog is 100%.

Group of orthologs #908. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:149

Q74ZX1              	100.00%		L8YGL5              	100.00%
Bootstrap support for Q74ZX1 as seed ortholog is 100%.
Bootstrap support for L8YGL5 as seed ortholog is 100%.

Group of orthologs #909. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:149

Q750J5              	100.00%		L9J8R3              	100.00%
Bootstrap support for Q750J5 as seed ortholog is 100%.
Bootstrap support for L9J8R3 as seed ortholog is 100%.

Group of orthologs #910. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:87

Q754Q6              	100.00%		L8YDM5              	100.00%
Bootstrap support for Q754Q6 as seed ortholog is 100%.
Bootstrap support for L8YDM5 as seed ortholog is 94%.

Group of orthologs #911. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:149

Q759T4              	100.00%		L8YCV0              	100.00%
Bootstrap support for Q759T4 as seed ortholog is 100%.
Bootstrap support for L8YCV0 as seed ortholog is 100%.

Group of orthologs #912. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 T.chinensis:149

Q74ZY7              	100.00%		L9KQG4              	100.00%
Bootstrap support for Q74ZY7 as seed ortholog is 100%.
Bootstrap support for L9KQG4 as seed ortholog is 100%.

Group of orthologs #913. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.chinensis:148

Q75BD2              	100.00%		L8Y271              	100.00%
                    	       		L8YAJ8              	39.52%
                    	       		L9JRB1              	31.39%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for L8Y271 as seed ortholog is 100%.

Group of orthologs #914. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.chinensis:148

Q75CE2              	100.00%		L8Y0Y6              	100.00%
Bootstrap support for Q75CE2 as seed ortholog is 100%.
Bootstrap support for L8Y0Y6 as seed ortholog is 100%.

Group of orthologs #915. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 T.chinensis:148

Q752Z2              	100.00%		L9KQQ6              	100.00%
Bootstrap support for Q752Z2 as seed ortholog is 100%.
Bootstrap support for L9KQQ6 as seed ortholog is 100%.

Group of orthologs #916. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:147

Q754P8              	100.00%		L9KXX2              	100.00%
                    	       		L9KS79              	32.67%
Bootstrap support for Q754P8 as seed ortholog is 100%.
Bootstrap support for L9KXX2 as seed ortholog is 100%.

Group of orthologs #917. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:147

Q756F4              	100.00%		L8YFL0              	100.00%
Bootstrap support for Q756F4 as seed ortholog is 100%.
Bootstrap support for L8YFL0 as seed ortholog is 100%.

Group of orthologs #918. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:147

Q75DJ3              	100.00%		L8YB34              	100.00%
Bootstrap support for Q75DJ3 as seed ortholog is 100%.
Bootstrap support for L8YB34 as seed ortholog is 100%.

Group of orthologs #919. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:147

E7FHV0              	100.00%		L9KGX8              	100.00%
Bootstrap support for E7FHV0 as seed ortholog is 100%.
Bootstrap support for L9KGX8 as seed ortholog is 100%.

Group of orthologs #920. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 T.chinensis:147

Q75BR4              	100.00%		L9L6S0              	100.00%
Bootstrap support for Q75BR4 as seed ortholog is 100%.
Bootstrap support for L9L6S0 as seed ortholog is 100%.

Group of orthologs #921. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:146

Q759B9              	100.00%		L9J9R1              	100.00%
                    	       		L9JD58              	53.87%
                    	       		L8Y5H8              	47.89%
                    	       		L9LB93              	8.45%
Bootstrap support for Q759B9 as seed ortholog is 100%.
Bootstrap support for L9J9R1 as seed ortholog is 100%.

Group of orthologs #922. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:44

Q75CC6              	100.00%		L8YAT1              	100.00%
                    	       		L8Y7K8              	39.81%
                    	       		L8Y7D7              	12.96%
Bootstrap support for Q75CC6 as seed ortholog is 100%.
Bootstrap support for L8YAT1 as seed ortholog is 98%.

Group of orthologs #923. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:146

Q75CJ8              	100.00%		L8YE47              	100.00%
                    	       		L9LD50              	61.75%
                    	       		L8Y701              	54.74%
Bootstrap support for Q75CJ8 as seed ortholog is 100%.
Bootstrap support for L8YE47 as seed ortholog is 100%.

Group of orthologs #924. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:94

Q75E82              	100.00%		L8Y714              	100.00%
Bootstrap support for Q75E82 as seed ortholog is 97%.
Bootstrap support for L8Y714 as seed ortholog is 99%.

Group of orthologs #925. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:146

Q753P3              	100.00%		L9JAW1              	100.00%
Bootstrap support for Q753P3 as seed ortholog is 100%.
Bootstrap support for L9JAW1 as seed ortholog is 100%.

Group of orthologs #926. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:146

Q75BQ4              	100.00%		L8YCZ7              	100.00%
Bootstrap support for Q75BQ4 as seed ortholog is 100%.
Bootstrap support for L8YCZ7 as seed ortholog is 100%.

Group of orthologs #927. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:22

Q750M6              	100.00%		L9KKY9              	100.00%
Bootstrap support for Q750M6 as seed ortholog is 100%.
Bootstrap support for L9KKY9 as seed ortholog is 77%.

Group of orthologs #928. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 T.chinensis:146

Q758A5              	100.00%		L9KH54              	100.00%
Bootstrap support for Q758A5 as seed ortholog is 100%.
Bootstrap support for L9KH54 as seed ortholog is 100%.

Group of orthologs #929. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 T.chinensis:41

Q756V2              	100.00%		L8Y7V0              	100.00%
                    	       		L9KZL3              	96.00%
                    	       		L9KFM2              	92.94%
                    	       		L9KPN1              	89.88%
                    	       		L9KYP1              	89.18%
                    	       		L9KVB0              	80.47%
                    	       		L9L9M3              	80.00%
                    	       		L9KKP4              	72.71%
                    	       		L9KGZ1              	71.29%
                    	       		L9KQT9              	68.94%
                    	       		L9L2E8              	67.06%
                    	       		L9KYI9              	63.06%
                    	       		L9KS88              	61.41%
                    	       		L9KI94              	60.71%
                    	       		L9JIF5              	59.76%
                    	       		L9KTR1              	59.06%
                    	       		L9KN60              	58.59%
                    	       		L9JU28              	57.18%
                    	       		L9KIF0              	56.71%
                    	       		L9KXW5              	55.06%
                    	       		L9LDM7              	54.35%
                    	       		L9KX32              	53.65%
                    	       		L9L2D4              	52.47%
                    	       		L9JEL8              	50.59%
                    	       		L9JD08              	48.47%
                    	       		L9KRS1              	46.59%
                    	       		L9KRX9              	46.12%
                    	       		L9JA95              	45.88%
                    	       		L9KMS1              	44.94%
                    	       		L9L926              	44.47%
                    	       		L9L6T5              	44.00%
                    	       		L9JCK9              	43.76%
                    	       		L9KND3              	43.53%
                    	       		L9KQ75              	43.53%
                    	       		L9JDU9              	43.29%
                    	       		L9KU96              	43.29%
                    	       		L9LD11              	43.06%
                    	       		L9KU42              	42.82%
                    	       		L9JA02              	42.12%
                    	       		L9JQZ3              	41.18%
                    	       		L9KYQ0              	40.71%
                    	       		L9L2H5              	40.24%
                    	       		L9LD12              	39.53%
                    	       		L9JFW2              	38.59%
                    	       		L9KKN2              	38.59%
                    	       		L9KRL9              	38.35%
                    	       		L9JUP3              	38.12%
                    	       		L9KXP6              	37.65%
                    	       		L9JPY4              	37.41%
                    	       		L9KPI7              	37.18%
                    	       		L9L701              	36.71%
                    	       		L9JWF3              	36.24%
                    	       		L9K6M5              	36.24%
                    	       		L9KL95              	35.53%
                    	       		L9L137              	34.12%
                    	       		L9K0N0              	33.18%
                    	       		L9KMC1              	32.94%
                    	       		L9LG89              	32.47%
                    	       		L9LD30              	31.53%
                    	       		L9L2N4              	31.53%
                    	       		L9L8V7              	31.53%
                    	       		L9LAJ5              	31.29%
                    	       		L9L9G0              	30.35%
                    	       		L9JD92              	30.12%
                    	       		L9JC42              	29.41%
                    	       		L9KSS2              	28.94%
                    	       		L9LES4              	28.94%
                    	       		L9JEI4              	28.94%
                    	       		L9L8S2              	28.71%
                    	       		L9JGW7              	28.00%
                    	       		L9L641              	27.06%
                    	       		L9KUU8              	27.06%
                    	       		L9LDD6              	27.06%
                    	       		L9L7Y2              	25.88%
                    	       		L9KMA6              	24.94%
                    	       		L9K7Z0              	24.71%
                    	       		L9L3N5              	24.71%
                    	       		L9L8A5              	24.00%
                    	       		L9KKA1              	23.06%
                    	       		L9KZ62              	21.65%
                    	       		L9KVS6              	21.18%
                    	       		L9KMN9              	18.82%
                    	       		L9L4Z0              	18.82%
                    	       		L9KS36              	18.35%
                    	       		L9K9X0              	18.35%
                    	       		L9KX90              	18.12%
                    	       		L9JIH8              	17.41%
                    	       		L9L3G5              	16.71%
                    	       		L9L3Z4              	15.06%
                    	       		L9L634              	14.12%
                    	       		L9KJM4              	13.65%
                    	       		L9KNI5              	13.41%
                    	       		L9KYX7              	12.71%
                    	       		L9L169              	12.47%
                    	       		L9L4G5              	12.47%
                    	       		L9KTK7              	12.47%
                    	       		L9KZ45              	12.24%
                    	       		L9KLD9              	11.29%
                    	       		L9JAN0              	7.06%
                    	       		L9L5B0              	7.06%
Bootstrap support for Q756V2 as seed ortholog is 100%.
Bootstrap support for L8Y7V0 as seed ortholog is 95%.

Group of orthologs #930. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 T.chinensis:145

Q757U7              	100.00%		L9JGP2              	100.00%
                    	       		L9L8Q6              	15.45%
Bootstrap support for Q757U7 as seed ortholog is 100%.
Bootstrap support for L9JGP2 as seed ortholog is 100%.

Group of orthologs #931. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q75AW1              	100.00%		L9JWI9              	100.00%
                    	       		L8YF06              	13.74%
Bootstrap support for Q75AW1 as seed ortholog is 100%.
Bootstrap support for L9JWI9 as seed ortholog is 100%.

Group of orthologs #932. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q75F24              	100.00%		L9JPR9              	100.00%
                    	       		L9JT87              	48.80%
Bootstrap support for Q75F24 as seed ortholog is 100%.
Bootstrap support for L9JPR9 as seed ortholog is 100%.

Group of orthologs #933. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q756I6              	100.00%		L9KT53              	100.00%
                    	       		L8Y7L0              	21.62%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for L9KT53 as seed ortholog is 100%.

Group of orthologs #934. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:5

Q75EA9              	100.00%		L9KIW5              	100.00%
Bootstrap support for Q75EA9 as seed ortholog is 100%.
Bootstrap support for L9KIW5 as seed ortholog is 52%.
Alternative seed ortholog is L8Y9J1 (5 bits away from this cluster)

Group of orthologs #935. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q755V0              	100.00%		L9KYM9              	100.00%
Bootstrap support for Q755V0 as seed ortholog is 100%.
Bootstrap support for L9KYM9 as seed ortholog is 100%.

Group of orthologs #936. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q758M8              	100.00%		L9L347              	100.00%
Bootstrap support for Q758M8 as seed ortholog is 100%.
Bootstrap support for L9L347 as seed ortholog is 100%.

Group of orthologs #937. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q75DK2              	100.00%		L9KYH8              	100.00%
Bootstrap support for Q75DK2 as seed ortholog is 100%.
Bootstrap support for L9KYH8 as seed ortholog is 100%.

Group of orthologs #938. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 T.chinensis:144

Q75BA5              	100.00%		L9LEF3              	100.00%
Bootstrap support for Q75BA5 as seed ortholog is 100%.
Bootstrap support for L9LEF3 as seed ortholog is 100%.

Group of orthologs #939. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.chinensis:143

Q757T8              	100.00%		L8Y235              	100.00%
Q75EN2              	5.03%		
Bootstrap support for Q757T8 as seed ortholog is 100%.
Bootstrap support for L8Y235 as seed ortholog is 100%.

Group of orthologs #940. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.chinensis:77

Q757Q1              	100.00%		L8Y5V2              	100.00%
Bootstrap support for Q757Q1 as seed ortholog is 100%.
Bootstrap support for L8Y5V2 as seed ortholog is 84%.

Group of orthologs #941. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:143

Q75C00              	100.00%		L9JLS9              	100.00%
Bootstrap support for Q75C00 as seed ortholog is 76%.
Bootstrap support for L9JLS9 as seed ortholog is 100%.

Group of orthologs #942. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.chinensis:67

Q75A60              	100.00%		L9KJN0              	100.00%
Bootstrap support for Q75A60 as seed ortholog is 100%.
Bootstrap support for L9KJN0 as seed ortholog is 97%.

Group of orthologs #943. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.chinensis:143

Q75CA5              	100.00%		L9KXW0              	100.00%
Bootstrap support for Q75CA5 as seed ortholog is 100%.
Bootstrap support for L9KXW0 as seed ortholog is 100%.

Group of orthologs #944. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 T.chinensis:143

Q758M6              	100.00%		L9LBN5              	100.00%
Bootstrap support for Q758M6 as seed ortholog is 100%.
Bootstrap support for L9LBN5 as seed ortholog is 100%.

Group of orthologs #945. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.chinensis:142

Q75D56              	100.00%		L8YAV6              	100.00%
                    	       		L8YEN2              	63.53%
                    	       		L9L2W8              	29.86%
Bootstrap support for Q75D56 as seed ortholog is 100%.
Bootstrap support for L8YAV6 as seed ortholog is 100%.

Group of orthologs #946. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.chinensis:142

Q759B6              	100.00%		L9L870              	100.00%
                    	       		L9JH37              	81.90%
                    	       		L9JC06              	51.88%
Bootstrap support for Q759B6 as seed ortholog is 100%.
Bootstrap support for L9L870 as seed ortholog is 100%.

Group of orthologs #947. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.chinensis:142

Q750Q2              	100.00%		L8Y4X7              	100.00%
Bootstrap support for Q750Q2 as seed ortholog is 100%.
Bootstrap support for L8Y4X7 as seed ortholog is 100%.

Group of orthologs #948. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 T.chinensis:142

Q75E94              	100.00%		L8YBM9              	100.00%
Bootstrap support for Q75E94 as seed ortholog is 100%.
Bootstrap support for L8YBM9 as seed ortholog is 100%.

Group of orthologs #949. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:141

Q753W3              	100.00%		L9L2J8              	100.00%
                    	       		L9L046              	39.86%
                    	       		L8Y2F2              	38.14%
Bootstrap support for Q753W3 as seed ortholog is 100%.
Bootstrap support for L9L2J8 as seed ortholog is 100%.

Group of orthologs #950. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:8 T.chinensis:54

Q750Z0              	100.00%		L9L962              	100.00%
                    	       		L8Y2Z4              	44.90%
Bootstrap support for Q750Z0 as seed ortholog is 61%.
Alternative seed ortholog is Q75DG7 (8 bits away from this cluster)
Bootstrap support for L9L962 as seed ortholog is 87%.

Group of orthologs #951. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:141

Q758L8              	100.00%		L8Y7P4              	100.00%
Bootstrap support for Q758L8 as seed ortholog is 100%.
Bootstrap support for L8Y7P4 as seed ortholog is 100%.

Group of orthologs #952. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:141

Q759W8              	100.00%		L8YD04              	100.00%
Bootstrap support for Q759W8 as seed ortholog is 78%.
Bootstrap support for L8YD04 as seed ortholog is 100%.

Group of orthologs #953. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:141

Q753C1              	100.00%		L9JKP4              	100.00%
Bootstrap support for Q753C1 as seed ortholog is 100%.
Bootstrap support for L9JKP4 as seed ortholog is 100%.

Group of orthologs #954. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:141

Q75E84              	100.00%		L9JIJ3              	100.00%
Bootstrap support for Q75E84 as seed ortholog is 100%.
Bootstrap support for L9JIJ3 as seed ortholog is 100%.

Group of orthologs #955. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:141

Q756E2              	100.00%		L9KNY7              	100.00%
Bootstrap support for Q756E2 as seed ortholog is 100%.
Bootstrap support for L9KNY7 as seed ortholog is 100%.

Group of orthologs #956. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 T.chinensis:141

Q755P0              	100.00%		L9KYT5              	100.00%
Bootstrap support for Q755P0 as seed ortholog is 100%.
Bootstrap support for L9KYT5 as seed ortholog is 100%.

Group of orthologs #957. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:16 T.chinensis:42

Q758L4              	100.00%		L9L0D4              	100.00%
Bootstrap support for Q758L4 as seed ortholog is 69%.
Alternative seed ortholog is Q75AC6 (16 bits away from this cluster)
Bootstrap support for L9L0D4 as seed ortholog is 88%.

Group of orthologs #958. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 T.chinensis:86

Q75B92              	100.00%		L9KUZ5              	100.00%
Bootstrap support for Q75B92 as seed ortholog is 100%.
Bootstrap support for L9KUZ5 as seed ortholog is 94%.

Group of orthologs #959. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 T.chinensis:139

Q75BC2              	100.00%		L8XZ81              	100.00%
                    	       		L8Y860              	75.65%
                    	       		L8Y6B5              	60.71%
Bootstrap support for Q75BC2 as seed ortholog is 100%.
Bootstrap support for L8XZ81 as seed ortholog is 100%.

Group of orthologs #960. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:31 T.chinensis:75

Q754C3              	100.00%		L9KTE1              	100.00%
Bootstrap support for Q754C3 as seed ortholog is 81%.
Bootstrap support for L9KTE1 as seed ortholog is 99%.

Group of orthologs #961. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.chinensis:11

Q75B41              	100.00%		L8Y3Y6              	100.00%
Bootstrap support for Q75B41 as seed ortholog is 88%.
Bootstrap support for L8Y3Y6 as seed ortholog is 70%.
Alternative seed ortholog is L9JUA6 (11 bits away from this cluster)

Group of orthologs #962. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 T.chinensis:42

Q750R7              	100.00%		L9JBL0              	100.00%
Bootstrap support for Q750R7 as seed ortholog is 100%.
Bootstrap support for L9JBL0 as seed ortholog is 67%.
Alternative seed ortholog is L9JP72 (42 bits away from this cluster)

Group of orthologs #963. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.chinensis:47

Q74ZV8              	100.00%		L9L9D9              	100.00%
Bootstrap support for Q74ZV8 as seed ortholog is 89%.
Bootstrap support for L9L9D9 as seed ortholog is 83%.

Group of orthologs #964. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.chinensis:137

Q753F4              	100.00%		L9KZP9              	100.00%
                    	       		L9JI23              	81.18%
                    	       		L8YAT7              	77.65%
                    	       		L9KTW8              	57.65%
                    	       		L9KG24              	57.65%
                    	       		L9L999              	54.12%
                    	       		L9KGK0              	52.94%
                    	       		L9LD56              	30.59%
                    	       		L9KY81              	20.00%
Bootstrap support for Q753F4 as seed ortholog is 100%.
Bootstrap support for L9KZP9 as seed ortholog is 100%.

Group of orthologs #965. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.chinensis:15

Q757R2              	100.00%		L9J8Z6              	100.00%
                    	       		L9KRR9              	10.83%
                    	       		L9KT15              	9.04%
                    	       		L9KZL7              	8.15%
Bootstrap support for Q757R2 as seed ortholog is 100%.
Bootstrap support for L9J8Z6 as seed ortholog is 64%.
Alternative seed ortholog is L9LB31 (15 bits away from this cluster)

Group of orthologs #966. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.chinensis:137

Q75CS6              	100.00%		L8YFX5              	100.00%
                    	       		L9KH69              	26.53%
                    	       		L9KQL0              	9.26%
                    	       		L8Y788              	5.15%
Bootstrap support for Q75CS6 as seed ortholog is 100%.
Bootstrap support for L8YFX5 as seed ortholog is 100%.

Group of orthologs #967. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 T.chinensis:21

Q75CM3              	100.00%		L9KPU1              	100.00%
                    	       		L8YC42              	45.33%
Bootstrap support for Q75CM3 as seed ortholog is 100%.
Bootstrap support for L9KPU1 as seed ortholog is 68%.
Alternative seed ortholog is L8Y8C3 (21 bits away from this cluster)

Group of orthologs #968. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:43

Q757D7              	100.00%		L8YB32              	100.00%
                    	       		L8Y8D4              	91.45%
                    	       		L9JEH1              	88.89%
                    	       		L8Y2L8              	83.76%
                    	       		L8Y605              	83.76%
                    	       		L9L4R8              	82.05%
                    	       		L8Y6C7              	81.20%
                    	       		L8YCN6              	81.20%
                    	       		L9L552              	80.34%
                    	       		L9JVN6              	76.07%
                    	       		L9JTK2              	72.65%
                    	       		L9L990              	71.79%
                    	       		L9J993              	70.94%
                    	       		L8Y7I7              	67.52%
                    	       		L9KD44              	67.52%
                    	       		L9JWG2              	66.67%
                    	       		L9KNA7              	66.67%
                    	       		L9L0T8              	66.67%
                    	       		L8XZS0              	64.96%
                    	       		L9KI51              	62.39%
                    	       		L9KSM4              	58.97%
                    	       		L8Y5A5              	58.97%
                    	       		L9K3G9              	58.97%
                    	       		L9KN33              	57.26%
                    	       		L8Y5B8              	51.28%
                    	       		L9JEF3              	51.28%
                    	       		L8Y4V5              	50.43%
                    	       		L9JYN4              	50.43%
                    	       		L9L7K3              	48.72%
                    	       		L9L4I2              	44.44%
                    	       		L9L589              	44.44%
                    	       		L9L7X0              	38.46%
                    	       		L9JAJ4              	33.33%
                    	       		L9KXT8              	31.62%
                    	       		L9L810              	23.93%
                    	       		L9KI46              	22.22%
                    	       		L9LB21              	21.37%
                    	       		L9KSJ3              	21.37%
                    	       		L9L3R8              	20.51%
                    	       		L9KWD4              	17.09%
                    	       		L9KV52              	17.09%
                    	       		L9KM75              	17.09%
                    	       		L8YA87              	16.24%
                    	       		L9LAG7              	16.24%
                    	       		L9L934              	14.53%
                    	       		L9KPJ5              	11.97%
                    	       		L9L331              	11.97%
                    	       		L9L6S7              	9.40%
                    	       		L9JKK9              	8.55%
                    	       		L8Y6S9              	5.98%
                    	       		L9LBW0              	5.98%
                    	       		L9KW43              	5.13%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for L8YB32 as seed ortholog is 99%.

Group of orthologs #969. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:76

Q752M2              	100.00%		L8Y927              	100.00%
Bootstrap support for Q752M2 as seed ortholog is 100%.
Bootstrap support for L8Y927 as seed ortholog is 99%.

Group of orthologs #970. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:136

Q752W1              	100.00%		L9JCE4              	100.00%
Bootstrap support for Q752W1 as seed ortholog is 100%.
Bootstrap support for L9JCE4 as seed ortholog is 100%.

Group of orthologs #971. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:136

Q754S2              	100.00%		L9JBD9              	100.00%
Bootstrap support for Q754S2 as seed ortholog is 100%.
Bootstrap support for L9JBD9 as seed ortholog is 100%.

Group of orthologs #972. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:136

Q751V5              	100.00%		L9L034              	100.00%
Bootstrap support for Q751V5 as seed ortholog is 100%.
Bootstrap support for L9L034 as seed ortholog is 100%.

Group of orthologs #973. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:136

Q75EP2              	100.00%		L9KV62              	100.00%
Bootstrap support for Q75EP2 as seed ortholog is 100%.
Bootstrap support for L9KV62 as seed ortholog is 100%.

Group of orthologs #974. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:136

Q75F63              	100.00%		L9L653              	100.00%
Bootstrap support for Q75F63 as seed ortholog is 100%.
Bootstrap support for L9L653 as seed ortholog is 100%.

Group of orthologs #975. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 T.chinensis:136

Q75A73              	100.00%		L9LBX2              	100.00%
Bootstrap support for Q75A73 as seed ortholog is 100%.
Bootstrap support for L9LBX2 as seed ortholog is 100%.

Group of orthologs #976. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.chinensis:135

Q752S4              	100.00%		L9L4G0              	100.00%
                    	       		L9L8B1              	99.15%
                    	       		L8Y6X6              	81.13%
Bootstrap support for Q752S4 as seed ortholog is 100%.
Bootstrap support for L9L4G0 as seed ortholog is 100%.

Group of orthologs #977. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.chinensis:135

Q752G7              	100.00%		L8Y5N2              	100.00%
Bootstrap support for Q752G7 as seed ortholog is 100%.
Bootstrap support for L8Y5N2 as seed ortholog is 100%.

Group of orthologs #978. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.chinensis:51

Q75AF2              	100.00%		L8Y914              	100.00%
Bootstrap support for Q75AF2 as seed ortholog is 99%.
Bootstrap support for L8Y914 as seed ortholog is 99%.

Group of orthologs #979. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:63

Q754Q8              	100.00%		L9J9A5              	100.00%
Bootstrap support for Q754Q8 as seed ortholog is 100%.
Bootstrap support for L9J9A5 as seed ortholog is 99%.

Group of orthologs #980. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 T.chinensis:39

Q74ZQ9              	100.00%		L9KP36              	100.00%
Bootstrap support for Q74ZQ9 as seed ortholog is 100%.
Bootstrap support for L9KP36 as seed ortholog is 78%.

Group of orthologs #981. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q755F0              	100.00%		L8YA14              	100.00%
                    	       		L8Y4S8              	82.48%
                    	       		L9JAX2              	40.00%
                    	       		L8YDZ1              	30.15%
Bootstrap support for Q755F0 as seed ortholog is 100%.
Bootstrap support for L8YA14 as seed ortholog is 100%.

Group of orthologs #982. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q755A4              	100.00%		L9J944              	100.00%
                    	       		L8Y7C7              	28.20%
                    	       		L8Y1X2              	22.10%
                    	       		L8Y1M9              	21.80%
Bootstrap support for Q755A4 as seed ortholog is 100%.
Bootstrap support for L9J944 as seed ortholog is 100%.

Group of orthologs #983. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q756G2              	100.00%		L8Y7L8              	100.00%
Bootstrap support for Q756G2 as seed ortholog is 100%.
Bootstrap support for L8Y7L8 as seed ortholog is 100%.

Group of orthologs #984. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q75B46              	100.00%		L9KGA2              	100.00%
Bootstrap support for Q75B46 as seed ortholog is 100%.
Bootstrap support for L9KGA2 as seed ortholog is 100%.

Group of orthologs #985. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q751U6              	100.00%		L9KU61              	100.00%
Bootstrap support for Q751U6 as seed ortholog is 100%.
Bootstrap support for L9KU61 as seed ortholog is 100%.

Group of orthologs #986. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.chinensis:26

Q75CE7              	100.00%		L9KL00              	100.00%
Bootstrap support for Q75CE7 as seed ortholog is 92%.
Bootstrap support for L9KL00 as seed ortholog is 82%.

Group of orthologs #987. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q74ZR4              	100.00%		L9L317              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for L9L317 as seed ortholog is 100%.

Group of orthologs #988. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q75CT1              	100.00%		L9KXN2              	100.00%
Bootstrap support for Q75CT1 as seed ortholog is 100%.
Bootstrap support for L9KXN2 as seed ortholog is 100%.

Group of orthologs #989. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 T.chinensis:134

Q74Z47              	100.00%		L9LA83              	100.00%
Bootstrap support for Q74Z47 as seed ortholog is 100%.
Bootstrap support for L9LA83 as seed ortholog is 100%.

Group of orthologs #990. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:39

Q75DF1              	100.00%		L9L002              	100.00%
                    	       		L9LAX1              	42.52%
                    	       		L9KPQ9              	40.65%
                    	       		L8Y586              	38.79%
                    	       		L8YA79              	36.92%
                    	       		L9LCU2              	36.45%
                    	       		L9JTF5              	23.36%
Bootstrap support for Q75DF1 as seed ortholog is 100%.
Bootstrap support for L9L002 as seed ortholog is 97%.

Group of orthologs #991. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q750E5              	100.00%		L9JFH7              	100.00%
                    	       		L8YBF7              	18.89%
Bootstrap support for Q750E5 as seed ortholog is 100%.
Bootstrap support for L9JFH7 as seed ortholog is 100%.

Group of orthologs #992. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q75A38              	100.00%		L9KR85              	100.00%
Q75A37              	77.41%		
Bootstrap support for Q75A38 as seed ortholog is 100%.
Bootstrap support for L9KR85 as seed ortholog is 100%.

Group of orthologs #993. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q75DA5              	100.00%		L8YB43              	100.00%
Bootstrap support for Q75DA5 as seed ortholog is 100%.
Bootstrap support for L8YB43 as seed ortholog is 100%.

Group of orthologs #994. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q75F23              	100.00%		L9J8N7              	100.00%
Bootstrap support for Q75F23 as seed ortholog is 100%.
Bootstrap support for L9J8N7 as seed ortholog is 100%.

Group of orthologs #995. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q757B6              	100.00%		L9KHJ4              	100.00%
Bootstrap support for Q757B6 as seed ortholog is 100%.
Bootstrap support for L9KHJ4 as seed ortholog is 100%.

Group of orthologs #996. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q755L1              	100.00%		L9KUX1              	100.00%
Bootstrap support for Q755L1 as seed ortholog is 100%.
Bootstrap support for L9KUX1 as seed ortholog is 100%.

Group of orthologs #997. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:133

Q754Z5              	100.00%		L9L7Y6              	100.00%
Bootstrap support for Q754Z5 as seed ortholog is 100%.
Bootstrap support for L9L7Y6 as seed ortholog is 100%.

Group of orthologs #998. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 T.chinensis:2

Q75D95              	100.00%		L9LBY4              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for L9LBY4 as seed ortholog is 61%.
Alternative seed ortholog is L8YBD8 (2 bits away from this cluster)

Group of orthologs #999. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.chinensis:132

Q75A22              	100.00%		L8Y1K9              	100.00%
                    	       		L9L462              	100.00%
Bootstrap support for Q75A22 as seed ortholog is 100%.
Bootstrap support for L8Y1K9 as seed ortholog is 100%.
Bootstrap support for L9L462 as seed ortholog is 100%.

Group of orthologs #1000. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.chinensis:132

Q75BB5              	100.00%		L9L403              	100.00%
Bootstrap support for Q75BB5 as seed ortholog is 100%.
Bootstrap support for L9L403 as seed ortholog is 100%.

Group of orthologs #1001. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 T.chinensis:132

Q759R2              	100.00%		L9L8S0              	100.00%
Bootstrap support for Q759R2 as seed ortholog is 100%.
Bootstrap support for L9L8S0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:43

Q75DI4              	100.00%		L9LBB7              	100.00%
                    	       		L8Y694              	59.64%
                    	       		L9LBD7              	54.22%
                    	       		L8Y819              	51.81%
                    	       		L8Y417              	50.60%
                    	       		L8YAU5              	44.58%
                    	       		L9JH09              	42.77%
                    	       		L9L0I6              	38.55%
                    	       		L9LA49              	26.51%
                    	       		L9KTR5              	16.27%
                    	       		L9KQE7              	12.65%
                    	       		L8Y7P2              	7.23%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for L9LBB7 as seed ortholog is 99%.

Group of orthologs #1003. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q75ET4              	100.00%		L8YDI4              	100.00%
                    	       		L8Y6Q0              	34.53%
                    	       		L9KPK6              	33.68%
Bootstrap support for Q75ET4 as seed ortholog is 100%.
Bootstrap support for L8YDI4 as seed ortholog is 100%.

Group of orthologs #1004. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q753F6              	100.00%		L9KXD2              	100.00%
                    	       		L9KTT8              	16.19%
                    	       		L8YIC3              	14.00%
Bootstrap support for Q753F6 as seed ortholog is 100%.
Bootstrap support for L9KXD2 as seed ortholog is 100%.

Group of orthologs #1005. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:4

Q75BV1              	100.00%		L9KH84              	100.00%
                    	       		L9KYN8              	14.50%
Bootstrap support for Q75BV1 as seed ortholog is 100%.
Bootstrap support for L9KH84 as seed ortholog is 64%.
Alternative seed ortholog is L9KZY9 (4 bits away from this cluster)

Group of orthologs #1006. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q758N4              	100.00%		L8Y621              	100.00%
Bootstrap support for Q758N4 as seed ortholog is 100%.
Bootstrap support for L8Y621 as seed ortholog is 100%.

Group of orthologs #1007. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q75F86              	100.00%		L8Y545              	100.00%
Bootstrap support for Q75F86 as seed ortholog is 100%.
Bootstrap support for L8Y545 as seed ortholog is 100%.

Group of orthologs #1008. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q75CJ3              	100.00%		L8YBA2              	100.00%
Bootstrap support for Q75CJ3 as seed ortholog is 100%.
Bootstrap support for L8YBA2 as seed ortholog is 100%.

Group of orthologs #1009. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q753P6              	100.00%		L9JCV7              	100.00%
Bootstrap support for Q753P6 as seed ortholog is 100%.
Bootstrap support for L9JCV7 as seed ortholog is 100%.

Group of orthologs #1010. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:131

Q754J6              	100.00%		L9JDP6              	100.00%
Bootstrap support for Q754J6 as seed ortholog is 96%.
Bootstrap support for L9JDP6 as seed ortholog is 100%.

Group of orthologs #1011. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:11

Q74ZC8              	100.00%		L9L123              	100.00%
Bootstrap support for Q74ZC8 as seed ortholog is 100%.
Bootstrap support for L9L123 as seed ortholog is 46%.
Alternative seed ortholog is L8Y5U7 (11 bits away from this cluster)

Group of orthologs #1012. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q75EM8              	100.00%		L9KUM0              	100.00%
Bootstrap support for Q75EM8 as seed ortholog is 100%.
Bootstrap support for L9KUM0 as seed ortholog is 100%.

Group of orthologs #1013. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q754M4              	100.00%		L9L5C2              	100.00%
Bootstrap support for Q754M4 as seed ortholog is 100%.
Bootstrap support for L9L5C2 as seed ortholog is 100%.

Group of orthologs #1014. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 T.chinensis:131

Q752A2              	100.00%		L9L8D7              	100.00%
Bootstrap support for Q752A2 as seed ortholog is 100%.
Bootstrap support for L9L8D7 as seed ortholog is 100%.

Group of orthologs #1015. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.chinensis:130

Q755R1              	100.00%		L9KMM8              	85.44%
D8FGF0              	100.00%		L9JWT6              	100.00%
                    	       		L9KA97              	72.82%
                    	       		L8Y936              	70.87%
Bootstrap support for Q755R1 as seed ortholog is 100%.
Bootstrap support for D8FGF0 as seed ortholog is 100%.
Bootstrap support for L9JWT6 as seed ortholog is 100%.

Group of orthologs #1016. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.chinensis:130

Q74ZJ6              	100.00%		L8Y498              	100.00%
                    	       		L8Y041              	7.08%
Bootstrap support for Q74ZJ6 as seed ortholog is 100%.
Bootstrap support for L8Y498 as seed ortholog is 100%.

Group of orthologs #1017. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.chinensis:130

Q754I5              	100.00%		L9JIT0              	100.00%
Q753T1              	12.15%		
Bootstrap support for Q754I5 as seed ortholog is 100%.
Bootstrap support for L9JIT0 as seed ortholog is 100%.

Group of orthologs #1018. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.chinensis:130

Q759K6              	100.00%		L9L239              	100.00%
                    	       		L9KH64              	9.68%
Bootstrap support for Q759K6 as seed ortholog is 100%.
Bootstrap support for L9L239 as seed ortholog is 100%.

Group of orthologs #1019. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.chinensis:130

Q754J9              	100.00%		L8Y549              	100.00%
Bootstrap support for Q754J9 as seed ortholog is 100%.
Bootstrap support for L8Y549 as seed ortholog is 100%.

Group of orthologs #1020. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 T.chinensis:130

Q75CR9              	100.00%		L8Y5Q3              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for L8Y5Q3 as seed ortholog is 100%.

Group of orthologs #1021. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:33 T.chinensis:23

Q751D1              	100.00%		L9L0R6              	100.00%
Bootstrap support for Q751D1 as seed ortholog is 73%.
Alternative seed ortholog is Q754J2 (33 bits away from this cluster)
Bootstrap support for L9L0R6 as seed ortholog is 76%.

Group of orthologs #1022. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.chinensis:129

Q752U5              	100.00%		L9JAR0              	100.00%
                    	       		L9KZJ5              	84.27%
                    	       		L8XZI1              	80.90%
                    	       		L9LDD4              	76.40%
                    	       		L9L6K6              	74.16%
                    	       		L8Y4V0              	62.92%
                    	       		L8Y715              	57.30%
                    	       		L9KUS0              	53.93%
                    	       		L9L3L6              	46.07%
                    	       		L9KYF9              	40.45%
                    	       		L9LB70              	37.08%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for L9JAR0 as seed ortholog is 100%.

Group of orthologs #1023. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.chinensis:72

Q75AS8              	100.00%		L8Y2Z9              	100.00%
                    	       		L9JV45              	69.64%
                    	       		L8Y491              	66.07%
                    	       		L9JLT5              	36.90%
                    	       		L9K0G1              	11.31%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for L8Y2Z9 as seed ortholog is 99%.

Group of orthologs #1024. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.chinensis:129

Q75DL3              	100.00%		L9K626              	100.00%
                    	       		L9JEZ2              	7.53%
Bootstrap support for Q75DL3 as seed ortholog is 100%.
Bootstrap support for L9K626 as seed ortholog is 100%.

Group of orthologs #1025. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:129

Q757R7              	100.00%		L8YF95              	100.00%
Bootstrap support for Q757R7 as seed ortholog is 86%.
Bootstrap support for L8YF95 as seed ortholog is 100%.

Group of orthologs #1026. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.chinensis:129

Q75E34              	100.00%		L8YAE6              	100.00%
Bootstrap support for Q75E34 as seed ortholog is 100%.
Bootstrap support for L8YAE6 as seed ortholog is 100%.

Group of orthologs #1027. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:30

Q755D7              	100.00%		L9KG93              	100.00%
Bootstrap support for Q755D7 as seed ortholog is 99%.
Bootstrap support for L9KG93 as seed ortholog is 94%.

Group of orthologs #1028. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 T.chinensis:4

Q755X2              	100.00%		L9KKK5              	100.00%
Bootstrap support for Q755X2 as seed ortholog is 100%.
Bootstrap support for L9KKK5 as seed ortholog is 59%.
Alternative seed ortholog is L8Y189 (4 bits away from this cluster)

Group of orthologs #1029. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:74

Q74ZC2              	100.00%		L9L8A9              	100.00%
                    	       		L9JA17              	52.05%
                    	       		L9KWB2              	51.46%
                    	       		L9LFJ3              	46.20%
                    	       		L9LFJ7              	45.03%
                    	       		L9KIE3              	24.56%
                    	       		L9JB55              	15.79%
Bootstrap support for Q74ZC2 as seed ortholog is 100%.
Bootstrap support for L9L8A9 as seed ortholog is 99%.

Group of orthologs #1030. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q753N4              	100.00%		L8YCI2              	100.00%
Bootstrap support for Q753N4 as seed ortholog is 100%.
Bootstrap support for L8YCI2 as seed ortholog is 100%.

Group of orthologs #1031. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q755X8              	100.00%		L8YGP7              	100.00%
Bootstrap support for Q755X8 as seed ortholog is 100%.
Bootstrap support for L8YGP7 as seed ortholog is 100%.

Group of orthologs #1032. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q75AU0              	100.00%		L8YHR3              	100.00%
Bootstrap support for Q75AU0 as seed ortholog is 100%.
Bootstrap support for L8YHR3 as seed ortholog is 100%.

Group of orthologs #1033. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.chinensis:34

Q757Q7              	100.00%		L9JBU9              	100.00%
Bootstrap support for Q757Q7 as seed ortholog is 99%.
Bootstrap support for L9JBU9 as seed ortholog is 90%.

Group of orthologs #1034. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q75EE2              	100.00%		L9JIP2              	100.00%
Bootstrap support for Q75EE2 as seed ortholog is 100%.
Bootstrap support for L9JIP2 as seed ortholog is 100%.

Group of orthologs #1035. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q75F31              	100.00%		L9JIB8              	100.00%
Bootstrap support for Q75F31 as seed ortholog is 100%.
Bootstrap support for L9JIB8 as seed ortholog is 100%.

Group of orthologs #1036. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q754E3              	100.00%		L9KMR0              	100.00%
Bootstrap support for Q754E3 as seed ortholog is 100%.
Bootstrap support for L9KMR0 as seed ortholog is 100%.

Group of orthologs #1037. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:128

Q756H1              	100.00%		L9L1N9              	100.00%
Bootstrap support for Q756H1 as seed ortholog is 98%.
Bootstrap support for L9L1N9 as seed ortholog is 100%.

Group of orthologs #1038. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 T.chinensis:128

Q755Y0              	100.00%		L9L9Y8              	100.00%
Bootstrap support for Q755Y0 as seed ortholog is 100%.
Bootstrap support for L9L9Y8 as seed ortholog is 100%.

Group of orthologs #1039. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.chinensis:35

Q754G3              	100.00%		L8Y077              	100.00%
                    	       		L9KH96              	17.42%
Bootstrap support for Q754G3 as seed ortholog is 100%.
Bootstrap support for L8Y077 as seed ortholog is 91%.

Group of orthologs #1040. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.chinensis:127

Q75D11              	100.00%		L8YF13              	100.00%
                    	       		L9LAM9              	25.97%
Bootstrap support for Q75D11 as seed ortholog is 100%.
Bootstrap support for L8YF13 as seed ortholog is 100%.

Group of orthologs #1041. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.chinensis:127

Q75EZ3              	100.00%		L9KGP8              	100.00%
                    	       		L8YFZ1              	81.65%
Bootstrap support for Q75EZ3 as seed ortholog is 100%.
Bootstrap support for L9KGP8 as seed ortholog is 100%.

Group of orthologs #1042. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.chinensis:127

Q752C9              	100.00%		L8Y1Q8              	100.00%
Bootstrap support for Q752C9 as seed ortholog is 100%.
Bootstrap support for L8Y1Q8 as seed ortholog is 100%.

Group of orthologs #1043. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 T.chinensis:127

Q754Y2              	100.00%		L9L8W3              	100.00%
Bootstrap support for Q754Y2 as seed ortholog is 100%.
Bootstrap support for L9L8W3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q751Y7              	100.00%		L8Y8V7              	100.00%
                    	       		L9KVP8              	65.43%
                    	       		L9KHC5              	40.74%
                    	       		L9L9H4              	34.57%
Bootstrap support for Q751Y7 as seed ortholog is 100%.
Bootstrap support for L8Y8V7 as seed ortholog is 100%.

Group of orthologs #1045. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q75B24              	100.00%		L8YAN7              	100.00%
                    	       		L9L8W0              	59.24%
                    	       		L9K508              	29.40%
Bootstrap support for Q75B24 as seed ortholog is 100%.
Bootstrap support for L8YAN7 as seed ortholog is 100%.

Group of orthologs #1046. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q75D55              	100.00%		L9JG53              	100.00%
                    	       		L9KZR5              	77.89%
                    	       		L9KLP2              	11.36%
Bootstrap support for Q75D55 as seed ortholog is 100%.
Bootstrap support for L9JG53 as seed ortholog is 100%.

Group of orthologs #1047. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q74ZF6              	100.00%		L8Y1I3              	100.00%
                    	       		L9KME9              	62.83%
Bootstrap support for Q74ZF6 as seed ortholog is 100%.
Bootstrap support for L8Y1I3 as seed ortholog is 100%.

Group of orthologs #1048. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:68

Q751E3              	100.00%		L8YBQ0              	100.00%
                    	       		L9JC99              	6.60%
Bootstrap support for Q751E3 as seed ortholog is 100%.
Bootstrap support for L8YBQ0 as seed ortholog is 98%.

Group of orthologs #1049. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q758H1              	100.00%		L9L1W1              	100.00%
                    	       		L9L4Y4              	5.42%
Bootstrap support for Q758H1 as seed ortholog is 100%.
Bootstrap support for L9L1W1 as seed ortholog is 100%.

Group of orthologs #1050. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:22

Q75AA0              	100.00%		L9L145              	100.00%
                    	       		L9KVV6              	33.13%
Bootstrap support for Q75AA0 as seed ortholog is 100%.
Bootstrap support for L9L145 as seed ortholog is 39%.
Alternative seed ortholog is L9KNY1 (22 bits away from this cluster)

Group of orthologs #1051. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q75CU9              	100.00%		L9KF47              	100.00%
Bootstrap support for Q75CU9 as seed ortholog is 100%.
Bootstrap support for L9KF47 as seed ortholog is 100%.

Group of orthologs #1052. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 T.chinensis:126

Q752A0              	100.00%		L9L545              	100.00%
Bootstrap support for Q752A0 as seed ortholog is 100%.
Bootstrap support for L9L545 as seed ortholog is 100%.

Group of orthologs #1053. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.chinensis:125

Q756C6              	100.00%		L8Y7H5              	100.00%
Bootstrap support for Q756C6 as seed ortholog is 100%.
Bootstrap support for L8Y7H5 as seed ortholog is 100%.

Group of orthologs #1054. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:15 T.chinensis:46

Q758V7              	100.00%		L9JE23              	100.00%
Bootstrap support for Q758V7 as seed ortholog is 68%.
Alternative seed ortholog is Q75BY3 (15 bits away from this cluster)
Bootstrap support for L9JE23 as seed ortholog is 89%.

Group of orthologs #1055. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 T.chinensis:125

Q75BA9              	100.00%		L9KPV9              	100.00%
Bootstrap support for Q75BA9 as seed ortholog is 100%.
Bootstrap support for L9KPV9 as seed ortholog is 100%.

Group of orthologs #1056. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:124

Q75DM0              	100.00%		L9L675              	100.00%
Q75CJ2              	100.00%		L9JJ09              	100.00%
                    	       		L9L215              	62.71%
                    	       		L9L228              	38.18%
                    	       		L8Y3G3              	32.34%
                    	       		L8Y4D1              	20.08%
                    	       		L9KHY6              	13.36%
Bootstrap support for Q75DM0 as seed ortholog is 100%.
Bootstrap support for Q75CJ2 as seed ortholog is 100%.
Bootstrap support for L9L675 as seed ortholog is 100%.
Bootstrap support for L9JJ09 as seed ortholog is 100%.

Group of orthologs #1057. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:34

Q75BX2              	100.00%		L8YF40              	100.00%
Q75D28              	10.09%		L9KM08              	13.64%
Bootstrap support for Q75BX2 as seed ortholog is 100%.
Bootstrap support for L8YF40 as seed ortholog is 85%.

Group of orthologs #1058. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:124

Q75BL0              	100.00%		L8Y9K1              	100.00%
                    	       		L9K766              	29.82%
Bootstrap support for Q75BL0 as seed ortholog is 100%.
Bootstrap support for L8Y9K1 as seed ortholog is 100%.

Group of orthologs #1059. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:80

Q754Z0              	100.00%		L9L7V0              	100.00%
                    	       		L9JDB0              	26.21%
Bootstrap support for Q754Z0 as seed ortholog is 99%.
Bootstrap support for L9L7V0 as seed ortholog is 100%.

Group of orthologs #1060. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:124

Q74ZX9              	100.00%		L9JAY8              	100.00%
Bootstrap support for Q74ZX9 as seed ortholog is 100%.
Bootstrap support for L9JAY8 as seed ortholog is 100%.

Group of orthologs #1061. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:124

Q751A5              	100.00%		L9KLF9              	100.00%
Bootstrap support for Q751A5 as seed ortholog is 100%.
Bootstrap support for L9KLF9 as seed ortholog is 100%.

Group of orthologs #1062. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:39

Q74ZT3              	100.00%		L9KVH5              	100.00%
Bootstrap support for Q74ZT3 as seed ortholog is 100%.
Bootstrap support for L9KVH5 as seed ortholog is 90%.

Group of orthologs #1063. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 T.chinensis:124

Q75AN6              	100.00%		L9KTC7              	100.00%
Bootstrap support for Q75AN6 as seed ortholog is 100%.
Bootstrap support for L9KTC7 as seed ortholog is 100%.

Group of orthologs #1064. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.chinensis:123

Q750M9              	100.00%		L9JWD6              	100.00%
                    	       		L9JWW2              	59.96%
                    	       		L9JVW7              	55.12%
                    	       		L9KQ10              	29.10%
Bootstrap support for Q750M9 as seed ortholog is 100%.
Bootstrap support for L9JWD6 as seed ortholog is 100%.

Group of orthologs #1065. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:39 T.chinensis:0

Q754C4              	100.00%		L9J9L9              	100.00%
                    	       		L9KRL5              	23.39%
                    	       		L9J9G1              	10.13%
Bootstrap support for Q754C4 as seed ortholog is 85%.
Bootstrap support for L9J9L9 as seed ortholog is 45%.
Alternative seed ortholog is L9JUA6 (0 bits away from this cluster)

Group of orthologs #1066. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.chinensis:9

Q75DW3              	100.00%		L8Y3Q5              	100.00%
Bootstrap support for Q75DW3 as seed ortholog is 85%.
Bootstrap support for L8Y3Q5 as seed ortholog is 54%.
Alternative seed ortholog is L9KZX6 (9 bits away from this cluster)

Group of orthologs #1067. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.chinensis:123

Q75A97              	100.00%		L9KHW7              	100.00%
Bootstrap support for Q75A97 as seed ortholog is 100%.
Bootstrap support for L9KHW7 as seed ortholog is 100%.

Group of orthologs #1068. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.chinensis:123

Q750F5              	100.00%		L9L9I3              	100.00%
Bootstrap support for Q750F5 as seed ortholog is 100%.
Bootstrap support for L9L9I3 as seed ortholog is 100%.

Group of orthologs #1069. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 T.chinensis:123

Q75A02              	100.00%		L9L319              	100.00%
Bootstrap support for Q75A02 as seed ortholog is 100%.
Bootstrap support for L9L319 as seed ortholog is 100%.

Group of orthologs #1070. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.chinensis:122

Q759I8              	100.00%		L8Y7N0              	100.00%
Q752E8              	33.38%		L8YCK4              	51.37%
                    	       		L9JCE8              	39.47%
                    	       		L9L5U8              	29.05%
                    	       		L9KST9              	23.16%
Bootstrap support for Q759I8 as seed ortholog is 100%.
Bootstrap support for L8Y7N0 as seed ortholog is 100%.

Group of orthologs #1071. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 T.chinensis:122

Q75EF3              	100.00%		L9KY19              	100.00%
Bootstrap support for Q75EF3 as seed ortholog is 100%.
Bootstrap support for L9KY19 as seed ortholog is 100%.

Group of orthologs #1072. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.chinensis:13

Q758N3              	100.00%		L8YDZ4              	100.00%
                    	       		L8Y6D7              	51.87%
                    	       		L8Y7W5              	51.15%
                    	       		L8YDF5              	51.01%
                    	       		L9JCC0              	50.72%
                    	       		L9KVK5              	50.29%
                    	       		L9L4E3              	50.14%
                    	       		L8YC92              	49.43%
                    	       		L9LA41              	49.28%
                    	       		L8YCG5              	48.99%
                    	       		L8YBY6              	48.42%
                    	       		L8Y931              	48.42%
                    	       		L8YDM3              	48.13%
                    	       		L9KSJ1              	47.99%
                    	       		L9J9U0              	47.70%
                    	       		L9LG86              	47.56%
                    	       		L8YC29              	47.13%
                    	       		L8YFZ4              	46.98%
                    	       		L8YGD5              	46.84%
                    	       		L8YDD6              	46.55%
                    	       		L8Y5C7              	46.12%
                    	       		L8Y7X3              	45.98%
                    	       		L9L1Z3              	45.98%
                    	       		L8YEQ6              	45.83%
                    	       		L9KV64              	45.55%
                    	       		L8YB33              	45.26%
                    	       		L9KIP3              	45.26%
                    	       		L8Y5H2              	44.97%
                    	       		L9KXA5              	44.97%
                    	       		L8YBR6              	44.68%
                    	       		L8YBZ7              	44.54%
                    	       		L8YBZ2              	44.40%
                    	       		L8YDB9              	44.40%
                    	       		L8YHE4              	44.11%
                    	       		L8Y863              	43.97%
                    	       		L8YF42              	43.97%
                    	       		L9KLZ9              	43.97%
                    	       		L9L2X2              	43.82%
                    	       		L9KJ95              	43.68%
                    	       		L8YBS3              	43.68%
                    	       		L9KW12              	43.39%
                    	       		L8YDS5              	43.39%
                    	       		L8YEJ6              	43.25%
                    	       		L9L5C0              	43.10%
                    	       		L8Y7X8              	42.96%
                    	       		L9KIS4              	42.96%
                    	       		L9JCL7              	42.96%
                    	       		L8Y4V4              	42.96%
                    	       		L8YCH0              	42.82%
                    	       		L8Y8N4              	42.24%
                    	       		L9KR59              	41.95%
                    	       		L9KVX6              	41.95%
                    	       		L8YAV4              	41.52%
                    	       		L8YHD9              	41.38%
                    	       		L8Y346              	41.24%
                    	       		L8YGT8              	41.09%
                    	       		L8YFM5              	41.09%
                    	       		L9KH93              	41.09%
                    	       		L9KVG4              	40.95%
                    	       		L8Y3W1              	40.80%
                    	       		L9L0D9              	40.80%
                    	       		L9LCD6              	40.80%
                    	       		L8YFN6              	40.66%
                    	       		L9JBJ7              	40.66%
                    	       		L9JG04              	40.23%
                    	       		L9JC70              	40.09%
                    	       		L8Y5F1              	40.09%
                    	       		L8YC34              	39.08%
                    	       		L8Y949              	38.79%
                    	       		L8Y9P1              	38.51%
                    	       		L9L227              	38.51%
                    	       		L8YB29              	38.07%
                    	       		L8YDI3              	38.07%
                    	       		L9KW97              	37.79%
                    	       		L9JJ14              	37.21%
                    	       		L8Y4N1              	36.93%
                    	       		L9KIK7              	36.78%
                    	       		L8YFB5              	36.49%
                    	       		L8Y8F1              	36.35%
                    	       		L8YBJ8              	35.78%
                    	       		L8Y4S5              	35.63%
                    	       		L8YC38              	35.34%
                    	       		L9KUX4              	35.20%
                    	       		L9L0G8              	35.20%
                    	       		L9LD87              	35.20%
                    	       		L8Y3T0              	34.91%
                    	       		L9KJM8              	34.91%
                    	       		L8YHC9              	34.91%
                    	       		L8YC30              	34.77%
                    	       		L9KQE6              	34.77%
                    	       		L8Y8Q8              	34.48%
                    	       		L8Y172              	33.91%
                    	       		L9L4P0              	33.48%
                    	       		L9KWV7              	33.19%
                    	       		L9KTU9              	32.90%
                    	       		L8YEV5              	32.04%
                    	       		L8Y5E3              	31.75%
                    	       		L9LDR0              	31.61%
                    	       		L9JMP6              	30.75%
                    	       		L9KQ60              	30.46%
                    	       		L8Y600              	30.03%
                    	       		L9LBX6              	29.74%
                    	       		L8YAV0              	29.31%
                    	       		L9KJB5              	29.17%
                    	       		L9KYU0              	29.02%
                    	       		L9KYV7              	28.59%
                    	       		L9L0Q3              	28.59%
                    	       		L9KSL4              	28.02%
                    	       		L8YAZ4              	27.73%
                    	       		L9K6K0              	26.44%
                    	       		L9KTU5              	26.44%
                    	       		L8Y982              	25.00%
                    	       		L9KYG6              	23.42%
                    	       		L8Y8S0              	23.28%
                    	       		L8Y4X2              	22.13%
                    	       		L9KNA6              	21.55%
                    	       		L8Y530              	21.26%
                    	       		L9L888              	21.26%
                    	       		L9KI40              	20.98%
                    	       		L9KWG0              	20.55%
                    	       		L9KU62              	19.97%
                    	       		L8Y8G6              	18.10%
                    	       		L9K6E8              	17.82%
                    	       		L9KL01              	17.82%
                    	       		L9KV39              	15.66%
                    	       		L8Y5E9              	15.09%
                    	       		L9KYE3              	14.80%
                    	       		L9KQV9              	14.51%
                    	       		L8YBA1              	14.08%
                    	       		L8YET5              	11.78%
                    	       		L8Y4S6              	10.92%
                    	       		L9KPD1              	9.34%
                    	       		L8YGQ4              	8.91%
                    	       		L8YAI0              	7.47%
                    	       		L9LBU6              	7.18%
                    	       		L9JD87              	6.90%
                    	       		L8YFD9              	5.17%
Bootstrap support for Q758N3 as seed ortholog is 100%.
Bootstrap support for L8YDZ4 as seed ortholog is 63%.
Alternative seed ortholog is L8YBT1 (13 bits away from this cluster)

Group of orthologs #1073. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.chinensis:121

Q758W6              	100.00%		L9L6Y7              	100.00%
                    	       		L9L9L3              	100.00%
                    	       		L8Y5W0              	91.89%
                    	       		L9L477              	88.51%
                    	       		L9L1I9              	82.43%
                    	       		L8Y8R4              	81.76%
                    	       		L8YFR4              	79.73%
                    	       		L9KIV5              	74.32%
                    	       		L8YDY7              	72.97%
                    	       		L8YFC9              	70.27%
                    	       		L9L3W1              	60.14%
                    	       		L8YCC8              	43.24%
                    	       		L9L6U9              	33.78%
                    	       		L9L3X8              	22.97%
Bootstrap support for Q758W6 as seed ortholog is 100%.
Bootstrap support for L9L6Y7 as seed ortholog is 100%.
Bootstrap support for L9L9L3 as seed ortholog is 100%.

Group of orthologs #1074. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.chinensis:121

Q752Z9              	100.00%		L8YCX9              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for L8YCX9 as seed ortholog is 100%.

Group of orthologs #1075. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 T.chinensis:121

Q75A86              	100.00%		L9L2E2              	100.00%
Bootstrap support for Q75A86 as seed ortholog is 100%.
Bootstrap support for L9L2E2 as seed ortholog is 100%.

Group of orthologs #1076. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:120

Q751L1              	100.00%		L9L537              	100.00%
                    	       		L9KVH9              	27.85%
                    	       		L9JR99              	22.15%
                    	       		L9KZD9              	18.35%
                    	       		L9JF05              	10.13%
                    	       		L9JSJ9              	8.23%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for L9L537 as seed ortholog is 100%.

Group of orthologs #1077. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:36

Q759U8              	100.00%		L8Y0Y4              	100.00%
Q759G3              	16.73%		L9JBQ3              	44.19%
Q75E16              	15.61%		
Bootstrap support for Q759U8 as seed ortholog is 100%.
Bootstrap support for L8Y0Y4 as seed ortholog is 56%.
Alternative seed ortholog is L9KM43 (36 bits away from this cluster)

Group of orthologs #1078. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:23

Q751H2              	100.00%		L8YAG6              	100.00%
                    	       		L9KGP3              	100.00%
                    	       		L9KZ09              	17.83%
Bootstrap support for Q751H2 as seed ortholog is 100%.
Bootstrap support for L8YAG6 as seed ortholog is 87%.
Bootstrap support for L9KGP3 as seed ortholog is 87%.

Group of orthologs #1079. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:120

Q75BS9              	100.00%		L8Y4G5              	100.00%
Bootstrap support for Q75BS9 as seed ortholog is 100%.
Bootstrap support for L8Y4G5 as seed ortholog is 100%.

Group of orthologs #1080. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 T.chinensis:17

Q752I3              	100.00%		L9KGT3              	100.00%
Bootstrap support for Q752I3 as seed ortholog is 100%.
Bootstrap support for L9KGT3 as seed ortholog is 75%.

Group of orthologs #1081. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.chinensis:64

Q75A25              	100.00%		L9JD70              	100.00%
                    	       		L9JF24              	50.37%
                    	       		L9JD80              	49.63%
                    	       		L9L6R7              	48.89%
                    	       		L9KHV4              	31.11%
                    	       		L9KQL3              	24.44%
Bootstrap support for Q75A25 as seed ortholog is 100%.
Bootstrap support for L9JD70 as seed ortholog is 99%.

Group of orthologs #1082. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:26

Q75F17              	100.00%		L8YBX9              	100.00%
                    	       		L9JCK4              	14.01%
                    	       		L9LBG0              	13.62%
                    	       		L9JCQ2              	8.95%
Bootstrap support for Q75F17 as seed ortholog is 93%.
Bootstrap support for L8YBX9 as seed ortholog is 74%.
Alternative seed ortholog is L9KG95 (26 bits away from this cluster)

Group of orthologs #1083. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.chinensis:119

Q75CT5              	100.00%		L9KVN5              	100.00%
                    	       		L9KRA8              	76.08%
                    	       		L9KQM0              	52.38%
                    	       		L9KR45              	26.30%
Bootstrap support for Q75CT5 as seed ortholog is 100%.
Bootstrap support for L9KVN5 as seed ortholog is 100%.

Group of orthologs #1084. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.chinensis:119

Q756A3              	100.00%		L8Y6C6              	100.00%
Bootstrap support for Q756A3 as seed ortholog is 100%.
Bootstrap support for L8Y6C6 as seed ortholog is 100%.

Group of orthologs #1085. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:119

Q758U5              	100.00%		L8Y4M2              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for L8Y4M2 as seed ortholog is 100%.

Group of orthologs #1086. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:119

Q758C2              	100.00%		L9KKN5              	100.00%
Bootstrap support for Q758C2 as seed ortholog is 96%.
Bootstrap support for L9KKN5 as seed ortholog is 100%.

Group of orthologs #1087. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 T.chinensis:119

Q75AS4              	100.00%		L9KQ66              	100.00%
Bootstrap support for Q75AS4 as seed ortholog is 100%.
Bootstrap support for L9KQ66 as seed ortholog is 100%.

Group of orthologs #1088. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:37 T.chinensis:24

Q754T9              	100.00%		L8Y259              	100.00%
                    	       		L9KMV5              	100.00%
                    	       		L8Y8Y8              	67.91%
                    	       		L8Y7Q0              	43.69%
                    	       		L8Y937              	9.94%
Bootstrap support for Q754T9 as seed ortholog is 81%.
Bootstrap support for L8Y259 as seed ortholog is 75%.
Bootstrap support for L9KMV5 as seed ortholog is 76%.

Group of orthologs #1089. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.chinensis:118

Q754K8              	100.00%		L8YBB2              	100.00%
                    	       		L9KRP7              	30.91%
                    	       		L8Y9R8              	22.73%
Bootstrap support for Q754K8 as seed ortholog is 100%.
Bootstrap support for L8YBB2 as seed ortholog is 100%.

Group of orthologs #1090. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.chinensis:118

Q752P7              	100.00%		L8YFE9              	100.00%
Bootstrap support for Q752P7 as seed ortholog is 100%.
Bootstrap support for L8YFE9 as seed ortholog is 100%.

Group of orthologs #1091. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.chinensis:118

Q750R5              	100.00%		L9L1B7              	100.00%
Bootstrap support for Q750R5 as seed ortholog is 100%.
Bootstrap support for L9L1B7 as seed ortholog is 100%.

Group of orthologs #1092. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 T.chinensis:118

Q75E31              	100.00%		L9KWP7              	100.00%
Bootstrap support for Q75E31 as seed ortholog is 100%.
Bootstrap support for L9KWP7 as seed ortholog is 100%.

Group of orthologs #1093. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 T.chinensis:117

Q75DJ8              	100.00%		L8XZ03              	100.00%
Bootstrap support for Q75DJ8 as seed ortholog is 100%.
Bootstrap support for L8XZ03 as seed ortholog is 100%.

Group of orthologs #1094. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 T.chinensis:117

Q75D12              	100.00%		L9KFB4              	100.00%
Bootstrap support for Q75D12 as seed ortholog is 100%.
Bootstrap support for L9KFB4 as seed ortholog is 100%.

Group of orthologs #1095. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q75BQ0              	100.00%		L9L0H1              	100.00%
                    	       		L9L8E1              	87.31%
                    	       		L9KDX8              	44.03%
                    	       		L9KL17              	6.72%
Bootstrap support for Q75BQ0 as seed ortholog is 100%.
Bootstrap support for L9L0H1 as seed ortholog is 100%.

Group of orthologs #1096. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q75AK5              	100.00%		L8YBR7              	100.00%
                    	       		L9LAG6              	79.31%
                    	       		L9KF94              	66.38%
Bootstrap support for Q75AK5 as seed ortholog is 100%.
Bootstrap support for L8YBR7 as seed ortholog is 100%.

Group of orthologs #1097. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q75EE3              	100.00%		L9K3D0              	100.00%
                    	       		L9KGR1              	66.67%
Bootstrap support for Q75EE3 as seed ortholog is 100%.
Bootstrap support for L9K3D0 as seed ortholog is 100%.

Group of orthologs #1098. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q75E17              	100.00%		L8XZS4              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 100%.
Bootstrap support for L8XZS4 as seed ortholog is 100%.

Group of orthologs #1099. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q75B32              	100.00%		L8YAX6              	100.00%
Bootstrap support for Q75B32 as seed ortholog is 100%.
Bootstrap support for L8YAX6 as seed ortholog is 100%.

Group of orthologs #1100. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:22

Q75AL9              	100.00%		L9JE43              	100.00%
Bootstrap support for Q75AL9 as seed ortholog is 100%.
Bootstrap support for L9JE43 as seed ortholog is 93%.

Group of orthologs #1101. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:46

Q759W3              	100.00%		L9JIM3              	100.00%
Bootstrap support for Q759W3 as seed ortholog is 100%.
Bootstrap support for L9JIM3 as seed ortholog is 28%.
Alternative seed ortholog is L9KUF5 (46 bits away from this cluster)

Group of orthologs #1102. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:38

Q75F71              	100.00%		L9JH80              	100.00%
Bootstrap support for Q75F71 as seed ortholog is 95%.
Bootstrap support for L9JH80 as seed ortholog is 95%.

Group of orthologs #1103. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q759B3              	100.00%		L9KI73              	100.00%
Bootstrap support for Q759B3 as seed ortholog is 100%.
Bootstrap support for L9KI73 as seed ortholog is 100%.

Group of orthologs #1104. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q750M4              	100.00%		L9L2F8              	100.00%
Bootstrap support for Q750M4 as seed ortholog is 100%.
Bootstrap support for L9L2F8 as seed ortholog is 100%.

Group of orthologs #1105. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 T.chinensis:116

Q75DR6              	100.00%		L9KSK3              	100.00%
Bootstrap support for Q75DR6 as seed ortholog is 100%.
Bootstrap support for L9KSK3 as seed ortholog is 100%.

Group of orthologs #1106. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:36

Q75BK5              	100.00%		L9LD51              	100.00%
                    	       		L8Y4Q0              	20.67%
                    	       		L8YBP2              	18.14%
Bootstrap support for Q75BK5 as seed ortholog is 100%.
Bootstrap support for L9LD51 as seed ortholog is 97%.

Group of orthologs #1107. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:115

Q75DS3              	100.00%		L9JEG2              	100.00%
                    	       		L9JA40              	35.83%
Bootstrap support for Q75DS3 as seed ortholog is 100%.
Bootstrap support for L9JEG2 as seed ortholog is 100%.

Group of orthologs #1108. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:115

Q75B73              	100.00%		L8Y0T8              	100.00%
Bootstrap support for Q75B73 as seed ortholog is 100%.
Bootstrap support for L8Y0T8 as seed ortholog is 100%.

Group of orthologs #1109. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:115

Q75DU4              	100.00%		L9J9X3              	100.00%
Bootstrap support for Q75DU4 as seed ortholog is 100%.
Bootstrap support for L9J9X3 as seed ortholog is 100%.

Group of orthologs #1110. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:115

Q752L4              	100.00%		L9KI77              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for L9KI77 as seed ortholog is 100%.

Group of orthologs #1111. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:115

Q750C6              	100.00%		L9KYE6              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 100%.
Bootstrap support for L9KYE6 as seed ortholog is 100%.

Group of orthologs #1112. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:11

Q759W0              	100.00%		L9KWV0              	100.00%
Bootstrap support for Q759W0 as seed ortholog is 100%.
Bootstrap support for L9KWV0 as seed ortholog is 68%.
Alternative seed ortholog is L9KS80 (11 bits away from this cluster)

Group of orthologs #1113. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 T.chinensis:115

Q75E54              	100.00%		L9KXZ1              	100.00%
Bootstrap support for Q75E54 as seed ortholog is 100%.
Bootstrap support for L9KXZ1 as seed ortholog is 100%.

Group of orthologs #1114. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:57

Q75DM1              	100.00%		L9LAM3              	100.00%
Bootstrap support for Q75DM1 as seed ortholog is 92%.
Bootstrap support for L9LAM3 as seed ortholog is 87%.

Group of orthologs #1115. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q75EL9              	100.00%		L9KPG2              	100.00%
                    	       		L8Y913              	57.70%
                    	       		L9KXS9              	54.13%
Bootstrap support for Q75EL9 as seed ortholog is 100%.
Bootstrap support for L9KPG2 as seed ortholog is 100%.

Group of orthologs #1116. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.chinensis:114

Q757E9              	100.00%		L9KWH6              	100.00%
                    	       		L9KNS7              	10.20%
Bootstrap support for Q757E9 as seed ortholog is 95%.
Bootstrap support for L9KWH6 as seed ortholog is 100%.

Group of orthologs #1117. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q750E4              	100.00%		L9L8S7              	100.00%
                    	       		L9LA97              	10.95%
Bootstrap support for Q750E4 as seed ortholog is 100%.
Bootstrap support for L9L8S7 as seed ortholog is 100%.

Group of orthologs #1118. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q753E7              	100.00%		L8Y742              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for L8Y742 as seed ortholog is 100%.

Group of orthologs #1119. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q755F2              	100.00%		L8Y8W9              	100.00%
Bootstrap support for Q755F2 as seed ortholog is 100%.
Bootstrap support for L8Y8W9 as seed ortholog is 100%.

Group of orthologs #1120. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q75B40              	100.00%		L9JB31              	100.00%
Bootstrap support for Q75B40 as seed ortholog is 100%.
Bootstrap support for L9JB31 as seed ortholog is 100%.

Group of orthologs #1121. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q751T9              	100.00%		L9KN97              	100.00%
Bootstrap support for Q751T9 as seed ortholog is 100%.
Bootstrap support for L9KN97 as seed ortholog is 100%.

Group of orthologs #1122. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q758I7              	100.00%		L9KUQ9              	100.00%
Bootstrap support for Q758I7 as seed ortholog is 100%.
Bootstrap support for L9KUQ9 as seed ortholog is 100%.

Group of orthologs #1123. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q752S9              	100.00%		L9LC90              	100.00%
Bootstrap support for Q752S9 as seed ortholog is 100%.
Bootstrap support for L9LC90 as seed ortholog is 100%.

Group of orthologs #1124. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 T.chinensis:114

Q75C23              	100.00%		L9L8F6              	100.00%
Bootstrap support for Q75C23 as seed ortholog is 100%.
Bootstrap support for L9L8F6 as seed ortholog is 100%.

Group of orthologs #1125. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:57

Q75CL8              	100.00%		L8Y1X1              	100.00%
Bootstrap support for Q75CL8 as seed ortholog is 98%.
Bootstrap support for L8Y1X1 as seed ortholog is 96%.

Group of orthologs #1126. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.chinensis:113

Q75CH9              	100.00%		L8Y5A4              	100.00%
Bootstrap support for Q75CH9 as seed ortholog is 100%.
Bootstrap support for L8Y5A4 as seed ortholog is 100%.

Group of orthologs #1127. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 T.chinensis:113

Q757Y3              	100.00%		L9KHI2              	100.00%
Bootstrap support for Q757Y3 as seed ortholog is 100%.
Bootstrap support for L9KHI2 as seed ortholog is 100%.

Group of orthologs #1128. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.chinensis:56

Q75BV5              	100.00%		L9LDB9              	100.00%
Bootstrap support for Q75BV5 as seed ortholog is 83%.
Bootstrap support for L9LDB9 as seed ortholog is 88%.

Group of orthologs #1129. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.chinensis:4

Q756E7              	100.00%		L9KH36              	100.00%
                    	       		L9KIA7              	55.86%
Bootstrap support for Q756E7 as seed ortholog is 100%.
Bootstrap support for L9KH36 as seed ortholog is 55%.
Alternative seed ortholog is L9KFR8 (4 bits away from this cluster)

Group of orthologs #1130. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 T.chinensis:112

Q75AA9              	100.00%		L9KSR5              	100.00%
Bootstrap support for Q75AA9 as seed ortholog is 100%.
Bootstrap support for L9KSR5 as seed ortholog is 100%.

Group of orthologs #1131. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.chinensis:111

Q75A10              	100.00%		L8Y8Q5              	100.00%
Bootstrap support for Q75A10 as seed ortholog is 100%.
Bootstrap support for L8Y8Q5 as seed ortholog is 100%.

Group of orthologs #1132. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.chinensis:111

Q759R3              	100.00%		L8YBT6              	100.00%
Bootstrap support for Q759R3 as seed ortholog is 100%.
Bootstrap support for L8YBT6 as seed ortholog is 100%.

Group of orthologs #1133. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:111

Q750U6              	100.00%		L9JGF6              	100.00%
Bootstrap support for Q750U6 as seed ortholog is 100%.
Bootstrap support for L9JGF6 as seed ortholog is 100%.

Group of orthologs #1134. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.chinensis:111

Q75F78              	100.00%		L8YF21              	100.00%
Bootstrap support for Q75F78 as seed ortholog is 100%.
Bootstrap support for L8YF21 as seed ortholog is 100%.

Group of orthologs #1135. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.chinensis:14

Q752K2              	100.00%		L9KUS9              	100.00%
Bootstrap support for Q752K2 as seed ortholog is 84%.
Bootstrap support for L9KUS9 as seed ortholog is 62%.
Alternative seed ortholog is L8YBG5 (14 bits away from this cluster)

Group of orthologs #1136. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.chinensis:111

Q75EN5              	100.00%		L9KKU5              	100.00%
Bootstrap support for Q75EN5 as seed ortholog is 100%.
Bootstrap support for L9KKU5 as seed ortholog is 100%.

Group of orthologs #1137. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 T.chinensis:111

Q751A2              	100.00%		L9L3V8              	100.00%
Bootstrap support for Q751A2 as seed ortholog is 100%.
Bootstrap support for L9L3V8 as seed ortholog is 100%.

Group of orthologs #1138. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.chinensis:37

Q75E42              	100.00%		L9KT63              	100.00%
                    	       		L9KXP8              	21.83%
                    	       		L9JAS7              	8.80%
Bootstrap support for Q75E42 as seed ortholog is 100%.
Bootstrap support for L9KT63 as seed ortholog is 88%.

Group of orthologs #1139. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.chinensis:33

Q75AL4              	100.00%		L9KYJ5              	100.00%
Q752Y4              	17.79%		
Q75C62              	11.06%		
Bootstrap support for Q75AL4 as seed ortholog is 100%.
Bootstrap support for L9KYJ5 as seed ortholog is 80%.

Group of orthologs #1140. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.chinensis:110

Q75CM5              	100.00%		L9L0K1              	100.00%
Q752H9              	5.17%		
Bootstrap support for Q75CM5 as seed ortholog is 100%.
Bootstrap support for L9L0K1 as seed ortholog is 100%.

Group of orthologs #1141. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 T.chinensis:34

Q750G9              	100.00%		L8Y6A7              	100.00%
Bootstrap support for Q750G9 as seed ortholog is 100%.
Bootstrap support for L8Y6A7 as seed ortholog is 93%.

Group of orthologs #1142. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:110

Q74ZG5              	100.00%		L9JFQ1              	100.00%
Bootstrap support for Q74ZG5 as seed ortholog is 88%.
Bootstrap support for L9JFQ1 as seed ortholog is 100%.

Group of orthologs #1143. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:26 T.chinensis:110

Q757P7              	100.00%		L9JEC2              	100.00%
Bootstrap support for Q757P7 as seed ortholog is 71%.
Alternative seed ortholog is Q75A94 (26 bits away from this cluster)
Bootstrap support for L9JEC2 as seed ortholog is 100%.

Group of orthologs #1144. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:109

Q74Z67              	100.00%		L9JCH0              	100.00%
                    	       		L9KQX2              	58.44%
Bootstrap support for Q74Z67 as seed ortholog is 100%.
Bootstrap support for L9JCH0 as seed ortholog is 100%.

Group of orthologs #1145. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:25

Q75C52              	100.00%		L9L3S9              	100.00%
                    	       		L9KI20              	13.04%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for L9L3S9 as seed ortholog is 99%.

Group of orthologs #1146. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:6

Q75CA7              	100.00%		L8Y0F4              	100.00%
Bootstrap support for Q75CA7 as seed ortholog is 100%.
Bootstrap support for L8Y0F4 as seed ortholog is 59%.
Alternative seed ortholog is L8Y2V0 (6 bits away from this cluster)

Group of orthologs #1147. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:109

Q754U7              	100.00%		L8YCS1              	100.00%
Bootstrap support for Q754U7 as seed ortholog is 100%.
Bootstrap support for L8YCS1 as seed ortholog is 100%.

Group of orthologs #1148. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 T.chinensis:109

Q75AP9              	100.00%		L9JCG6              	100.00%
Bootstrap support for Q75AP9 as seed ortholog is 100%.
Bootstrap support for L9JCG6 as seed ortholog is 100%.

Group of orthologs #1149. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.chinensis:108

Q755G2              	100.00%		L9KEQ1              	100.00%
                    	       		L9KV21              	60.94%
                    	       		L9KW13              	34.76%
                    	       		L9KVG6              	33.95%
                    	       		L9KUE1              	19.63%
                    	       		L8YFG2              	6.95%
Bootstrap support for Q755G2 as seed ortholog is 97%.
Bootstrap support for L9KEQ1 as seed ortholog is 100%.

Group of orthologs #1150. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.chinensis:108

Q75CV5              	100.00%		L9JWC9              	100.00%
                    	       		L9KUK7              	41.05%
                    	       		L8YAE5              	40.10%
Bootstrap support for Q75CV5 as seed ortholog is 100%.
Bootstrap support for L9JWC9 as seed ortholog is 100%.

Group of orthologs #1151. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.chinensis:55

Q752Y1              	100.00%		L9LAE9              	100.00%
                    	       		L8Y8T4              	60.56%
                    	       		L8Y486              	57.23%
Bootstrap support for Q752Y1 as seed ortholog is 81%.
Bootstrap support for L9LAE9 as seed ortholog is 83%.

Group of orthologs #1152. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.chinensis:108

Q75C01              	100.00%		L9KHR5              	100.00%
                    	       		L9KNE2              	23.10%
Bootstrap support for Q75C01 as seed ortholog is 100%.
Bootstrap support for L9KHR5 as seed ortholog is 100%.

Group of orthologs #1153. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.chinensis:108

Q755C6              	100.00%		L8Y7P8              	100.00%
Bootstrap support for Q755C6 as seed ortholog is 100%.
Bootstrap support for L8Y7P8 as seed ortholog is 100%.

Group of orthologs #1154. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:108

Q759T8              	100.00%		L8Y6A3              	100.00%
Bootstrap support for Q759T8 as seed ortholog is 93%.
Bootstrap support for L8Y6A3 as seed ortholog is 100%.

Group of orthologs #1155. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 T.chinensis:108

Q75A14              	100.00%		L9L958              	100.00%
Bootstrap support for Q75A14 as seed ortholog is 100%.
Bootstrap support for L9L958 as seed ortholog is 100%.

Group of orthologs #1156. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:107

Q755K1              	100.00%		L9KC17              	100.00%
                    	       		L9LBI3              	74.88%
                    	       		L9L1X9              	16.83%
Bootstrap support for Q755K1 as seed ortholog is 100%.
Bootstrap support for L9KC17 as seed ortholog is 100%.

Group of orthologs #1157. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:107

Q75BZ9              	100.00%		L9JQ40              	100.00%
                    	       		L9KPR0              	85.12%
                    	       		L9KAA3              	74.38%
Bootstrap support for Q75BZ9 as seed ortholog is 100%.
Bootstrap support for L9JQ40 as seed ortholog is 100%.

Group of orthologs #1158. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:107

Q755Q7              	100.00%		L8Y665              	100.00%
Bootstrap support for Q755Q7 as seed ortholog is 100%.
Bootstrap support for L8Y665 as seed ortholog is 100%.

Group of orthologs #1159. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:107

Q75E61              	100.00%		L8Y7M1              	100.00%
Bootstrap support for Q75E61 as seed ortholog is 100%.
Bootstrap support for L8Y7M1 as seed ortholog is 100%.

Group of orthologs #1160. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 T.chinensis:107

Q75DA3              	100.00%		L8YEJ1              	100.00%
Bootstrap support for Q75DA3 as seed ortholog is 100%.
Bootstrap support for L8YEJ1 as seed ortholog is 100%.

Group of orthologs #1161. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:11 T.chinensis:29

Q75EP3              	100.00%		L9L033              	100.00%
Bootstrap support for Q75EP3 as seed ortholog is 61%.
Alternative seed ortholog is Q750J8 (11 bits away from this cluster)
Bootstrap support for L9L033 as seed ortholog is 78%.

Group of orthologs #1162. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.chinensis:106

Q756A0              	100.00%		L9J9H4              	100.00%
                    	       		L9L229              	100.00%
                    	       		L9KKB9              	74.07%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for L9J9H4 as seed ortholog is 100%.
Bootstrap support for L9L229 as seed ortholog is 100%.

Group of orthologs #1163. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.chinensis:106

Q755B3              	100.00%		L8Y4S9              	100.00%
Bootstrap support for Q755B3 as seed ortholog is 100%.
Bootstrap support for L8Y4S9 as seed ortholog is 100%.

Group of orthologs #1164. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.chinensis:106

Q756R1              	100.00%		L9JQG7              	100.00%
Bootstrap support for Q756R1 as seed ortholog is 100%.
Bootstrap support for L9JQG7 as seed ortholog is 100%.

Group of orthologs #1165. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 T.chinensis:106

Q750K3              	100.00%		L9KXG7              	100.00%
Bootstrap support for Q750K3 as seed ortholog is 100%.
Bootstrap support for L9KXG7 as seed ortholog is 100%.

Group of orthologs #1166. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:25

Q755Z4              	100.00%		L9KJP0              	100.00%
                    	       		L9K1Y1              	13.46%
                    	       		L8Y4D9              	9.76%
                    	       		L8Y716              	9.32%
                    	       		L9JKE4              	9.32%
                    	       		L9KHX2              	8.28%
                    	       		L8YCH7              	7.84%
Bootstrap support for Q755Z4 as seed ortholog is 100%.
Bootstrap support for L9KJP0 as seed ortholog is 78%.

Group of orthologs #1167. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:16

Q752G0              	100.00%		L8Y5L2              	100.00%
                    	       		L9KYM5              	24.06%
                    	       		L9JQA1              	12.97%
Bootstrap support for Q752G0 as seed ortholog is 100%.
Bootstrap support for L8Y5L2 as seed ortholog is 60%.
Alternative seed ortholog is L8Y310 (16 bits away from this cluster)

Group of orthologs #1168. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:105

Q752L1              	100.00%		L9JY70              	100.00%
                    	       		L8YCX1              	88.89%
Bootstrap support for Q752L1 as seed ortholog is 100%.
Bootstrap support for L9JY70 as seed ortholog is 100%.

Group of orthologs #1169. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:105

Q755Z8              	100.00%		L9KZP6              	100.00%
                    	       		L9L874              	24.64%
Bootstrap support for Q755Z8 as seed ortholog is 100%.
Bootstrap support for L9KZP6 as seed ortholog is 100%.

Group of orthologs #1170. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:105

Q751B7              	100.00%		L8Y335              	100.00%
Bootstrap support for Q751B7 as seed ortholog is 100%.
Bootstrap support for L8Y335 as seed ortholog is 100%.

Group of orthologs #1171. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:105

Q75EZ2              	100.00%		L9KGY7              	100.00%
Bootstrap support for Q75EZ2 as seed ortholog is 100%.
Bootstrap support for L9KGY7 as seed ortholog is 100%.

Group of orthologs #1172. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 T.chinensis:105

Q751W7              	100.00%		L9L0X7              	100.00%
Bootstrap support for Q751W7 as seed ortholog is 100%.
Bootstrap support for L9L0X7 as seed ortholog is 100%.

Group of orthologs #1173. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.chinensis:40

Q759T0              	100.00%		L9KMY0              	100.00%
                    	       		L8YB51              	42.35%
                    	       		L9L2S8              	31.76%
Bootstrap support for Q759T0 as seed ortholog is 100%.
Bootstrap support for L9KMY0 as seed ortholog is 98%.

Group of orthologs #1174. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:104

Q752F0              	100.00%		L8YF22              	100.00%
Bootstrap support for Q752F0 as seed ortholog is 89%.
Bootstrap support for L8YF22 as seed ortholog is 100%.

Group of orthologs #1175. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 T.chinensis:104

Q755J2              	100.00%		L8YFZ7              	100.00%
Bootstrap support for Q755J2 as seed ortholog is 100%.
Bootstrap support for L8YFZ7 as seed ortholog is 100%.

Group of orthologs #1176. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.chinensis:103

Q759P0              	100.00%		L9KVC8              	100.00%
                    	       		L9JND3              	54.78%
                    	       		L9L8B7              	50.43%
                    	       		L9LDL1              	14.78%
                    	       		L9L579              	12.61%
Bootstrap support for Q759P0 as seed ortholog is 100%.
Bootstrap support for L9KVC8 as seed ortholog is 100%.

Group of orthologs #1177. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.chinensis:103

Q750N2              	100.00%		L8Y5V8              	100.00%
                    	       		L9JCQ6              	34.02%
Bootstrap support for Q750N2 as seed ortholog is 100%.
Bootstrap support for L8Y5V8 as seed ortholog is 100%.

Group of orthologs #1178. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 T.chinensis:103

Q75DF9              	100.00%		L9KGX6              	100.00%
Bootstrap support for Q75DF9 as seed ortholog is 100%.
Bootstrap support for L9KGX6 as seed ortholog is 100%.

Group of orthologs #1179. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:7

Q755N1              	100.00%		L9L944              	100.00%
                    	       		L9LAK6              	22.93%
                    	       		L9L7F4              	18.28%
                    	       		L9JHW1              	17.58%
                    	       		L8YGE3              	17.35%
                    	       		L9KCL8              	17.11%
                    	       		L8Y8P0              	12.92%
                    	       		L8YE36              	10.13%
                    	       		L8YAA3              	8.61%
Bootstrap support for Q755N1 as seed ortholog is 68%.
Alternative seed ortholog is Q75B85 (55 bits away from this cluster)
Bootstrap support for L9L944 as seed ortholog is 70%.
Alternative seed ortholog is L9JCU3 (7 bits away from this cluster)

Group of orthologs #1180. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.chinensis:60

Q750Y3              	100.00%		L9JEV9              	100.00%
                    	       		L9L0M8              	29.61%
                    	       		L9KI00              	6.19%
Bootstrap support for Q750Y3 as seed ortholog is 100%.
Bootstrap support for L9JEV9 as seed ortholog is 94%.

Group of orthologs #1181. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.chinensis:102

Q752B1              	100.00%		L9KKP5              	100.00%
                    	       		L9JJN5              	31.35%
Bootstrap support for Q752B1 as seed ortholog is 100%.
Bootstrap support for L9KKP5 as seed ortholog is 100%.

Group of orthologs #1182. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 T.chinensis:102

Q75DI0              	100.00%		L9KGV2              	100.00%
                    	       		L9KSA5              	41.94%
Bootstrap support for Q75DI0 as seed ortholog is 100%.
Bootstrap support for L9KGV2 as seed ortholog is 100%.

Group of orthologs #1183. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:38 T.chinensis:61

Q755G6              	100.00%		L8Y6Q8              	100.00%
Bootstrap support for Q755G6 as seed ortholog is 81%.
Bootstrap support for L8Y6Q8 as seed ortholog is 92%.

Group of orthologs #1184. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:102

Q75EP4              	100.00%		L8YB56              	100.00%
Bootstrap support for Q75EP4 as seed ortholog is 94%.
Bootstrap support for L8YB56 as seed ortholog is 100%.

Group of orthologs #1185. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.chinensis:47

Q75B64              	100.00%		L9LE20              	100.00%
                    	       		L9LBB1              	25.30%
                    	       		L9L566              	19.56%
                    	       		L9L914              	17.71%
                    	       		L9LA44              	16.19%
                    	       		L9L1K6              	12.82%
Bootstrap support for Q75B64 as seed ortholog is 100%.
Bootstrap support for L9LE20 as seed ortholog is 90%.

Group of orthologs #1186. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.chinensis:101

Q753Y8              	100.00%		L9L578              	100.00%
                    	       		L9JC37              	82.48%
Bootstrap support for Q753Y8 as seed ortholog is 100%.
Bootstrap support for L9L578 as seed ortholog is 100%.

Group of orthologs #1187. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 T.chinensis:101

Q75BD8              	100.00%		L9KPH7              	100.00%
Bootstrap support for Q75BD8 as seed ortholog is 100%.
Bootstrap support for L9KPH7 as seed ortholog is 100%.

Group of orthologs #1188. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.chinensis:100

Q752F4              	100.00%		L9L0Q6              	100.00%
                    	       		L8YD00              	28.27%
                    	       		L9JU20              	27.53%
Bootstrap support for Q752F4 as seed ortholog is 100%.
Bootstrap support for L9L0Q6 as seed ortholog is 100%.

Group of orthologs #1189. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.chinensis:100

Q752B7              	100.00%		L8Y5B0              	100.00%
Bootstrap support for Q752B7 as seed ortholog is 100%.
Bootstrap support for L8Y5B0 as seed ortholog is 100%.

Group of orthologs #1190. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 T.chinensis:100

Q75CL4              	100.00%		L9KHA9              	100.00%
Bootstrap support for Q75CL4 as seed ortholog is 100%.
Bootstrap support for L9KHA9 as seed ortholog is 100%.

Group of orthologs #1191. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q75AX6              	100.00%		L9J9N1              	100.00%
                    	       		L9KMC8              	25.35%
                    	       		L8Y3J7              	17.27%
Bootstrap support for Q75AX6 as seed ortholog is 100%.
Bootstrap support for L9J9N1 as seed ortholog is 100%.

Group of orthologs #1192. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q750W9              	100.00%		L8Y3D1              	100.00%
Bootstrap support for Q750W9 as seed ortholog is 100%.
Bootstrap support for L8Y3D1 as seed ortholog is 100%.

Group of orthologs #1193. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q756A6              	100.00%		L8Y9B7              	100.00%
Bootstrap support for Q756A6 as seed ortholog is 100%.
Bootstrap support for L8Y9B7 as seed ortholog is 100%.

Group of orthologs #1194. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q753P5              	100.00%		L9KJV7              	100.00%
Bootstrap support for Q753P5 as seed ortholog is 100%.
Bootstrap support for L9KJV7 as seed ortholog is 100%.

Group of orthologs #1195. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q758T0              	100.00%		L9KJD5              	100.00%
Bootstrap support for Q758T0 as seed ortholog is 100%.
Bootstrap support for L9KJD5 as seed ortholog is 100%.

Group of orthologs #1196. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q750Q8              	100.00%		L9KY08              	100.00%
Bootstrap support for Q750Q8 as seed ortholog is 100%.
Bootstrap support for L9KY08 as seed ortholog is 100%.

Group of orthologs #1197. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q75D63              	100.00%		L9KRA6              	100.00%
Bootstrap support for Q75D63 as seed ortholog is 100%.
Bootstrap support for L9KRA6 as seed ortholog is 100%.

Group of orthologs #1198. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q750R9              	100.00%		L9L274              	100.00%
Bootstrap support for Q750R9 as seed ortholog is 100%.
Bootstrap support for L9L274 as seed ortholog is 100%.

Group of orthologs #1199. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 T.chinensis:99

Q75AF5              	100.00%		L9L9X3              	100.00%
Bootstrap support for Q75AF5 as seed ortholog is 100%.
Bootstrap support for L9L9X3 as seed ortholog is 100%.

Group of orthologs #1200. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.chinensis:98

Q753U7              	100.00%		L9L8U1              	100.00%
Q751Q4              	100.00%		L8Y1V5              	100.00%
Bootstrap support for Q753U7 as seed ortholog is 100%.
Bootstrap support for Q751Q4 as seed ortholog is 100%.
Bootstrap support for L9L8U1 as seed ortholog is 100%.
Bootstrap support for L8Y1V5 as seed ortholog is 100%.

Group of orthologs #1201. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.chinensis:16

Q75A80              	100.00%		L8Y9B5              	100.00%
Bootstrap support for Q75A80 as seed ortholog is 100%.
Bootstrap support for L8Y9B5 as seed ortholog is 74%.
Alternative seed ortholog is L9L4X9 (16 bits away from this cluster)

Group of orthologs #1202. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.chinensis:98

Q750U7              	100.00%		L9L5K6              	100.00%
Bootstrap support for Q750U7 as seed ortholog is 100%.
Bootstrap support for L9L5K6 as seed ortholog is 100%.

Group of orthologs #1203. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 T.chinensis:98

Q75CG6              	100.00%		L9LCK1              	100.00%
Bootstrap support for Q75CG6 as seed ortholog is 100%.
Bootstrap support for L9LCK1 as seed ortholog is 100%.

Group of orthologs #1204. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:5

Q752L3              	100.00%		L8YC72              	100.00%
                    	       		L9JRV9              	31.87%
Bootstrap support for Q752L3 as seed ortholog is 91%.
Bootstrap support for L8YC72 as seed ortholog is 55%.
Alternative seed ortholog is L9L1W3 (5 bits away from this cluster)

Group of orthologs #1205. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.chinensis:97

Q752Q9              	100.00%		L8Y6B2              	100.00%
Bootstrap support for Q752Q9 as seed ortholog is 100%.
Bootstrap support for L8Y6B2 as seed ortholog is 100%.

Group of orthologs #1206. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 T.chinensis:97

Q75C22              	100.00%		L8Y616              	100.00%
Bootstrap support for Q75C22 as seed ortholog is 100%.
Bootstrap support for L8Y616 as seed ortholog is 100%.

Group of orthologs #1207. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:97

Q754Z9              	100.00%		L9KSK8              	100.00%
Bootstrap support for Q754Z9 as seed ortholog is 99%.
Bootstrap support for L9KSK8 as seed ortholog is 100%.

Group of orthologs #1208. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.chinensis:96

Q75F84              	100.00%		L8YFI2              	100.00%
                    	       		L9JGH7              	15.31%
                    	       		L9JC29              	14.77%
                    	       		L9JC34              	12.84%
Bootstrap support for Q75F84 as seed ortholog is 100%.
Bootstrap support for L8YFI2 as seed ortholog is 100%.

Group of orthologs #1209. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.chinensis:96

Q74ZW6              	100.00%		L9JBV4              	100.00%
                    	       		L9JH52              	6.07%
Bootstrap support for Q74ZW6 as seed ortholog is 100%.
Bootstrap support for L9JBV4 as seed ortholog is 100%.

Group of orthologs #1210. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.chinensis:21

Q752K5              	100.00%		L9L3E7              	100.00%
                    	       		L9L3K6              	46.62%
Bootstrap support for Q752K5 as seed ortholog is 100%.
Bootstrap support for L9L3E7 as seed ortholog is 85%.

Group of orthologs #1211. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:25 T.chinensis:96

Q757W2              	100.00%		L8Y3Y3              	100.00%
Bootstrap support for Q757W2 as seed ortholog is 80%.
Bootstrap support for L8Y3Y3 as seed ortholog is 100%.

Group of orthologs #1212. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.chinensis:96

Q759U3              	100.00%		L8YAJ9              	100.00%
Bootstrap support for Q759U3 as seed ortholog is 100%.
Bootstrap support for L8YAJ9 as seed ortholog is 100%.

Group of orthologs #1213. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 T.chinensis:96

Q752P6              	100.00%		L9KXL0              	100.00%
Bootstrap support for Q752P6 as seed ortholog is 100%.
Bootstrap support for L9KXL0 as seed ortholog is 100%.

Group of orthologs #1214. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.chinensis:95

Q750X7              	100.00%		L9JBH0              	100.00%
                    	       		L9LCW2              	24.14%
Bootstrap support for Q750X7 as seed ortholog is 100%.
Bootstrap support for L9JBH0 as seed ortholog is 100%.

Group of orthologs #1215. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.chinensis:95

Q75B21              	100.00%		L9KU77              	100.00%
                    	       		L9L5U5              	14.08%
Bootstrap support for Q75B21 as seed ortholog is 100%.
Bootstrap support for L9KU77 as seed ortholog is 100%.

Group of orthologs #1216. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.chinensis:30

Q759N2              	100.00%		L9L9J2              	100.00%
                    	       		L9JN72              	16.82%
Bootstrap support for Q759N2 as seed ortholog is 100%.
Bootstrap support for L9L9J2 as seed ortholog is 89%.

Group of orthologs #1217. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.chinensis:95

Q75G38              	100.00%		L8Y9T2              	100.00%
Bootstrap support for Q75G38 as seed ortholog is 100%.
Bootstrap support for L8Y9T2 as seed ortholog is 100%.

Group of orthologs #1218. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 T.chinensis:95

Q75C33              	100.00%		L9JFT7              	100.00%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for L9JFT7 as seed ortholog is 100%.

Group of orthologs #1219. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:94

Q75AS6              	100.00%		L9KMC2              	100.00%
Q75AS5              	60.29%		L9KLL2              	29.73%
                    	       		L9KVQ8              	17.43%
                    	       		L9KR68              	13.78%
                    	       		L9KXC2              	13.24%
                    	       		L9KZV1              	12.84%
                    	       		L8Y4A8              	8.78%
                    	       		L8Y6I2              	5.00%
Bootstrap support for Q75AS6 as seed ortholog is 100%.
Bootstrap support for L9KMC2 as seed ortholog is 100%.

Group of orthologs #1220. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:94

Q751F1              	100.00%		L8Y7G4              	100.00%
                    	       		L9KFT9              	65.29%
                    	       		L9JB85              	57.96%
                    	       		L9JG63              	45.22%
                    	       		L8Y8N0              	39.49%
                    	       		L9KSV9              	29.30%
                    	       		L9KP60              	25.80%
Bootstrap support for Q751F1 as seed ortholog is 100%.
Bootstrap support for L8Y7G4 as seed ortholog is 100%.

Group of orthologs #1221. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:30

Q752F2              	100.00%		L9L4J5              	100.00%
Q752I9              	100.00%		L9LA09              	100.00%
                    	       		L8YA75              	37.61%
                    	       		L9KGV5              	17.44%
                    	       		L9KTJ2              	12.38%
Bootstrap support for Q752F2 as seed ortholog is 100%.
Bootstrap support for Q752I9 as seed ortholog is 100%.
Bootstrap support for L9L4J5 as seed ortholog is 77%.
Bootstrap support for L9LA09 as seed ortholog is 67%.
Alternative seed ortholog is L8Y5W1 (30 bits away from this cluster)

Group of orthologs #1222. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:94

Q75F35              	100.00%		L9JKR8              	100.00%
                    	       		L9K4Y4              	31.98%
                    	       		L9KQ85              	5.78%
Bootstrap support for Q75F35 as seed ortholog is 100%.
Bootstrap support for L9JKR8 as seed ortholog is 100%.

Group of orthologs #1223. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:23

Q74ZD8              	100.00%		L9L5Z9              	100.00%
                    	       		L8Y3S9              	45.24%
                    	       		L9KST4              	38.10%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for L9L5Z9 as seed ortholog is 98%.

Group of orthologs #1224. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:94

Q75BZ5              	100.00%		L9L4C5              	100.00%
                    	       		L9KL07              	87.20%
                    	       		L8Y8W6              	64.01%
Bootstrap support for Q75BZ5 as seed ortholog is 100%.
Bootstrap support for L9L4C5 as seed ortholog is 100%.

Group of orthologs #1225. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:52

Q75AA5              	100.00%		L9JIG0              	100.00%
Bootstrap support for Q75AA5 as seed ortholog is 100%.
Bootstrap support for L9JIG0 as seed ortholog is 98%.

Group of orthologs #1226. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:94

Q750K4              	100.00%		L9KXT7              	100.00%
Bootstrap support for Q750K4 as seed ortholog is 100%.
Bootstrap support for L9KXT7 as seed ortholog is 100%.

Group of orthologs #1227. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 T.chinensis:94

Q75CA1              	100.00%		L9LBY9              	100.00%
Bootstrap support for Q75CA1 as seed ortholog is 100%.
Bootstrap support for L9LBY9 as seed ortholog is 100%.

Group of orthologs #1228. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q755N6              	100.00%		L8Y3R3              	100.00%
                    	       		L9KHF6              	89.73%
                    	       		L9L4N7              	35.68%
                    	       		L9KJC6              	22.70%
                    	       		L9JMH5              	16.76%
                    	       		L9KQ55              	14.05%
Bootstrap support for Q755N6 as seed ortholog is 100%.
Bootstrap support for L8Y3R3 as seed ortholog is 100%.

Group of orthologs #1229. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q75AV8              	100.00%		L9K2Q1              	100.00%
                    	       		L8Y3S3              	51.90%
                    	       		L9LCQ1              	50.95%
                    	       		L9KUK0              	36.49%
                    	       		L9KPM7              	31.04%
Bootstrap support for Q75AV8 as seed ortholog is 100%.
Bootstrap support for L9K2Q1 as seed ortholog is 100%.

Group of orthologs #1230. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q759V5              	100.00%		L9K0C0              	100.00%
                    	       		L9L9I0              	30.67%
                    	       		L8YCV4              	6.98%
Bootstrap support for Q759V5 as seed ortholog is 100%.
Bootstrap support for L9K0C0 as seed ortholog is 100%.

Group of orthologs #1231. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q754L8              	100.00%		L8XZP8              	100.00%
Bootstrap support for Q754L8 as seed ortholog is 100%.
Bootstrap support for L8XZP8 as seed ortholog is 100%.

Group of orthologs #1232. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q759M6              	100.00%		L8YAI7              	100.00%
Bootstrap support for Q759M6 as seed ortholog is 100%.
Bootstrap support for L8YAI7 as seed ortholog is 100%.

Group of orthologs #1233. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q75EQ1              	100.00%		L8YCG8              	100.00%
Bootstrap support for Q75EQ1 as seed ortholog is 100%.
Bootstrap support for L8YCG8 as seed ortholog is 100%.

Group of orthologs #1234. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q754H0              	100.00%		L9L0K9              	100.00%
Bootstrap support for Q754H0 as seed ortholog is 100%.
Bootstrap support for L9L0K9 as seed ortholog is 100%.

Group of orthologs #1235. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 T.chinensis:93

Q755Q1              	100.00%		L9L5D3              	100.00%
Bootstrap support for Q755Q1 as seed ortholog is 100%.
Bootstrap support for L9L5D3 as seed ortholog is 100%.

Group of orthologs #1236. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q756N6              	100.00%		L8YFM8              	100.00%
                    	       		L9L4R1              	100.00%
                    	       		L9KJA3              	75.25%
                    	       		L9KUG1              	67.75%
                    	       		L9KWV2              	63.21%
Bootstrap support for Q756N6 as seed ortholog is 100%.
Bootstrap support for L8YFM8 as seed ortholog is 100%.
Bootstrap support for L9L4R1 as seed ortholog is 100%.

Group of orthologs #1237. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q751V8              	100.00%		L8YCM3              	100.00%
Bootstrap support for Q751V8 as seed ortholog is 100%.
Bootstrap support for L8YCM3 as seed ortholog is 100%.

Group of orthologs #1238. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q750R8              	100.00%		L9JIV4              	100.00%
Bootstrap support for Q750R8 as seed ortholog is 100%.
Bootstrap support for L9JIV4 as seed ortholog is 100%.

Group of orthologs #1239. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q75CF1              	100.00%		L9K1A1              	100.00%
Bootstrap support for Q75CF1 as seed ortholog is 100%.
Bootstrap support for L9K1A1 as seed ortholog is 100%.

Group of orthologs #1240. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q754G6              	100.00%		L9KTL4              	100.00%
Bootstrap support for Q754G6 as seed ortholog is 100%.
Bootstrap support for L9KTL4 as seed ortholog is 100%.

Group of orthologs #1241. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q756Z3              	100.00%		L9KZV5              	100.00%
Bootstrap support for Q756Z3 as seed ortholog is 100%.
Bootstrap support for L9KZV5 as seed ortholog is 100%.

Group of orthologs #1242. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q754T3              	100.00%		L9L246              	100.00%
Bootstrap support for Q754T3 as seed ortholog is 100%.
Bootstrap support for L9L246 as seed ortholog is 100%.

Group of orthologs #1243. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q75BJ0              	100.00%		L9KXS3              	100.00%
Bootstrap support for Q75BJ0 as seed ortholog is 100%.
Bootstrap support for L9KXS3 as seed ortholog is 100%.

Group of orthologs #1244. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q757U0              	100.00%		L9LAU2              	100.00%
Bootstrap support for Q757U0 as seed ortholog is 100%.
Bootstrap support for L9LAU2 as seed ortholog is 100%.

Group of orthologs #1245. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 T.chinensis:92

Q75BS0              	100.00%		L9LAF1              	100.00%
Bootstrap support for Q75BS0 as seed ortholog is 100%.
Bootstrap support for L9LAF1 as seed ortholog is 100%.

Group of orthologs #1246. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q758Y2              	100.00%		L8YD95              	100.00%
                    	       		L9KYK2              	66.12%
                    	       		L9JEJ0              	50.83%
                    	       		L9KGB8              	45.87%
                    	       		L9KZC5              	40.08%
                    	       		L9KJQ3              	34.71%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for L8YD95 as seed ortholog is 100%.

Group of orthologs #1247. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:42

Q75EC3              	100.00%		L8Y4V1              	100.00%
Q759G9              	14.38%		L9KKA8              	43.49%
Bootstrap support for Q75EC3 as seed ortholog is 100%.
Bootstrap support for L8Y4V1 as seed ortholog is 96%.

Group of orthologs #1248. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q752K4              	100.00%		L9JDF1              	100.00%
                    	       		L9LCM7              	8.13%
Bootstrap support for Q752K4 as seed ortholog is 100%.
Bootstrap support for L9JDF1 as seed ortholog is 100%.

Group of orthologs #1249. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q75D70              	100.00%		L9J8H0              	100.00%
                    	       		L9KG03              	21.93%
Bootstrap support for Q75D70 as seed ortholog is 100%.
Bootstrap support for L9J8H0 as seed ortholog is 100%.

Group of orthologs #1250. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q74Z75              	100.00%		L9JGS1              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for L9JGS1 as seed ortholog is 100%.

Group of orthologs #1251. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q75ER0              	100.00%		L9JG26              	100.00%
Bootstrap support for Q75ER0 as seed ortholog is 100%.
Bootstrap support for L9JG26 as seed ortholog is 100%.

Group of orthologs #1252. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q753H3              	100.00%		L9KQT6              	100.00%
Bootstrap support for Q753H3 as seed ortholog is 100%.
Bootstrap support for L9KQT6 as seed ortholog is 100%.

Group of orthologs #1253. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:91

Q75CQ0              	100.00%		L9L6G2              	100.00%
Bootstrap support for Q75CQ0 as seed ortholog is 93%.
Bootstrap support for L9L6G2 as seed ortholog is 100%.

Group of orthologs #1254. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 T.chinensis:91

Q75EX0              	100.00%		L9L7W6              	100.00%
Bootstrap support for Q75EX0 as seed ortholog is 100%.
Bootstrap support for L9L7W6 as seed ortholog is 100%.

Group of orthologs #1255. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:90

Q75DJ1              	100.00%		L9JKM4              	100.00%
                    	       		L9KPW7              	88.75%
                    	       		L9KRP1              	82.50%
                    	       		L8Y4X1              	79.38%
                    	       		L9JA15              	45.00%
Bootstrap support for Q75DJ1 as seed ortholog is 100%.
Bootstrap support for L9JKM4 as seed ortholog is 100%.

Group of orthologs #1256. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:90

Q74ZK2              	100.00%		L9KWQ6              	100.00%
                    	       		L9JAJ5              	12.65%
                    	       		L8Y9M2              	6.48%
Bootstrap support for Q74ZK2 as seed ortholog is 100%.
Bootstrap support for L9KWQ6 as seed ortholog is 100%.

Group of orthologs #1257. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:90

Q75DS4              	100.00%		L9KR63              	100.00%
                    	       		L8YB49              	30.03%
                    	       		L9KD52              	18.41%
Bootstrap support for Q75DS4 as seed ortholog is 100%.
Bootstrap support for L9KR63 as seed ortholog is 100%.

Group of orthologs #1258. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:90

Q75C43              	100.00%		L9L7H3              	100.00%
                    	       		L8Y2P2              	14.29%
Bootstrap support for Q75C43 as seed ortholog is 100%.
Bootstrap support for L9L7H3 as seed ortholog is 100%.

Group of orthologs #1259. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:90

Q756L7              	100.00%		L8YCZ2              	100.00%
Bootstrap support for Q756L7 as seed ortholog is 100%.
Bootstrap support for L8YCZ2 as seed ortholog is 100%.

Group of orthologs #1260. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 T.chinensis:90

Q75BP1              	100.00%		L9KKQ1              	100.00%
Bootstrap support for Q75BP1 as seed ortholog is 100%.
Bootstrap support for L9KKQ1 as seed ortholog is 100%.

Group of orthologs #1261. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q75AL8              	100.00%		L9L1E5              	100.00%
                    	       		L9LBV5              	21.20%
                    	       		L9JIJ7              	9.07%
Bootstrap support for Q75AL8 as seed ortholog is 100%.
Bootstrap support for L9L1E5 as seed ortholog is 100%.

Group of orthologs #1262. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q75CI7              	100.00%		L9L6I7              	100.00%
                    	       		L9L4Z4              	26.66%
                    	       		L9L8A8              	24.56%
Bootstrap support for Q75CI7 as seed ortholog is 100%.
Bootstrap support for L9L6I7 as seed ortholog is 100%.

Group of orthologs #1263. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q75DB7              	100.00%		L9L4L1              	100.00%
                    	       		L8Y6H4              	78.82%
Bootstrap support for Q75DB7 as seed ortholog is 100%.
Bootstrap support for L9L4L1 as seed ortholog is 100%.

Group of orthologs #1264. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:15

Q754W2              	100.00%		L9LBV1              	100.00%
                    	       		L9LBI9              	70.54%
Bootstrap support for Q754W2 as seed ortholog is 100%.
Bootstrap support for L9LBV1 as seed ortholog is 65%.
Alternative seed ortholog is L9KJL5 (15 bits away from this cluster)

Group of orthologs #1265. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q74ZE5              	100.00%		L8Y8H8              	100.00%
Bootstrap support for Q74ZE5 as seed ortholog is 100%.
Bootstrap support for L8Y8H8 as seed ortholog is 100%.

Group of orthologs #1266. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q75DP9              	100.00%		L9JD18              	100.00%
Bootstrap support for Q75DP9 as seed ortholog is 100%.
Bootstrap support for L9JD18 as seed ortholog is 100%.

Group of orthologs #1267. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q75CV2              	100.00%		L9KH53              	100.00%
Bootstrap support for Q75CV2 as seed ortholog is 100%.
Bootstrap support for L9KH53 as seed ortholog is 100%.

Group of orthologs #1268. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q75B19              	100.00%		L9KUR3              	100.00%
Bootstrap support for Q75B19 as seed ortholog is 100%.
Bootstrap support for L9KUR3 as seed ortholog is 100%.

Group of orthologs #1269. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 T.chinensis:89

Q754F0              	100.00%		L9L196              	100.00%
Bootstrap support for Q754F0 as seed ortholog is 100%.
Bootstrap support for L9L196 as seed ortholog is 100%.

Group of orthologs #1270. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:14 T.chinensis:88

Q754S6              	100.00%		L9JCD5              	100.00%
                    	       		L8YBQ9              	80.15%
Bootstrap support for Q754S6 as seed ortholog is 69%.
Alternative seed ortholog is Q756K7 (14 bits away from this cluster)
Bootstrap support for L9JCD5 as seed ortholog is 100%.

Group of orthologs #1271. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 T.chinensis:88

Q759U5              	100.00%		L9KTX9              	100.00%
Bootstrap support for Q759U5 as seed ortholog is 100%.
Bootstrap support for L9KTX9 as seed ortholog is 100%.

Group of orthologs #1272. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:36

Q75DG9              	100.00%		L8YCZ5              	100.00%
                    	       		L9KWX5              	25.07%
                    	       		L9L0P6              	9.46%
Bootstrap support for Q75DG9 as seed ortholog is 100%.
Bootstrap support for L8YCZ5 as seed ortholog is 39%.
Alternative seed ortholog is L9KHZ9 (36 bits away from this cluster)

Group of orthologs #1273. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q75F32              	100.00%		L9JNV2              	100.00%
                    	       		L8YBV8              	39.42%
                    	       		L8Y592              	28.19%
Bootstrap support for Q75F32 as seed ortholog is 100%.
Bootstrap support for L9JNV2 as seed ortholog is 100%.

Group of orthologs #1274. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q754C5              	100.00%		L9KRS6              	100.00%
Q758U4              	35.59%		L9KS94              	7.28%
Bootstrap support for Q754C5 as seed ortholog is 100%.
Bootstrap support for L9KRS6 as seed ortholog is 100%.

Group of orthologs #1275. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q756L1              	100.00%		L9KU01              	100.00%
                    	       		L9KZU7              	36.27%
                    	       		L8Y625              	33.40%
Bootstrap support for Q756L1 as seed ortholog is 100%.
Bootstrap support for L9KU01 as seed ortholog is 100%.

Group of orthologs #1276. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q75BV8              	100.00%		L8Y849              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for L8Y849 as seed ortholog is 100%.

Group of orthologs #1277. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q757G1              	100.00%		L9J929              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for L9J929 as seed ortholog is 100%.

Group of orthologs #1278. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q75EQ8              	100.00%		L8YA24              	100.00%
Bootstrap support for Q75EQ8 as seed ortholog is 100%.
Bootstrap support for L8YA24 as seed ortholog is 100%.

Group of orthologs #1279. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q759H3              	100.00%		L9J8V6              	100.00%
Bootstrap support for Q759H3 as seed ortholog is 100%.
Bootstrap support for L9J8V6 as seed ortholog is 100%.

Group of orthologs #1280. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q753Z0              	100.00%		L9KGL2              	100.00%
Bootstrap support for Q753Z0 as seed ortholog is 100%.
Bootstrap support for L9KGL2 as seed ortholog is 100%.

Group of orthologs #1281. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q75B97              	100.00%		L9KZH6              	100.00%
Bootstrap support for Q75B97 as seed ortholog is 100%.
Bootstrap support for L9KZH6 as seed ortholog is 100%.

Group of orthologs #1282. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 T.chinensis:87

Q75DN6              	100.00%		L9L2P2              	100.00%
Bootstrap support for Q75DN6 as seed ortholog is 100%.
Bootstrap support for L9L2P2 as seed ortholog is 100%.

Group of orthologs #1283. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.chinensis:86

Q75BI2              	100.00%		L9L5A8              	100.00%
                    	       		L8Y1I2              	5.28%
Bootstrap support for Q75BI2 as seed ortholog is 100%.
Bootstrap support for L9L5A8 as seed ortholog is 100%.

Group of orthologs #1284. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.chinensis:86

Q754I4              	100.00%		L9JBY2              	100.00%
Bootstrap support for Q754I4 as seed ortholog is 100%.
Bootstrap support for L9JBY2 as seed ortholog is 100%.

Group of orthologs #1285. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.chinensis:86

Q752N1              	100.00%		L9KWM1              	100.00%
Bootstrap support for Q752N1 as seed ortholog is 100%.
Bootstrap support for L9KWM1 as seed ortholog is 100%.

Group of orthologs #1286. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.chinensis:86

Q755A3              	100.00%		L9L3U4              	100.00%
Bootstrap support for Q755A3 as seed ortholog is 100%.
Bootstrap support for L9L3U4 as seed ortholog is 100%.

Group of orthologs #1287. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 T.chinensis:24

Q75AR2              	100.00%		L9L7D7              	100.00%
Bootstrap support for Q75AR2 as seed ortholog is 100%.
Bootstrap support for L9L7D7 as seed ortholog is 81%.

Group of orthologs #1288. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q75B72              	100.00%		L9L1B8              	100.00%
                    	       		L9L903              	7.52%
                    	       		L9L1V9              	7.47%
                    	       		L8XZM0              	6.90%
                    	       		L9JEC7              	6.49%
                    	       		L8Y2S3              	5.61%
                    	       		L8YCC7              	5.56%
Bootstrap support for Q75B72 as seed ortholog is 100%.
Bootstrap support for L9L1B8 as seed ortholog is 100%.

Group of orthologs #1289. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:37

Q759G8              	100.00%		L8Y9W7              	100.00%
                    	       		L9KKM3              	22.56%
                    	       		L9KSI5              	13.44%
Bootstrap support for Q759G8 as seed ortholog is 100%.
Bootstrap support for L8Y9W7 as seed ortholog is 74%.
Alternative seed ortholog is L9JS85 (37 bits away from this cluster)

Group of orthologs #1290. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q755Q3              	100.00%		L9L8W4              	100.00%
                    	       		L8YDW3              	63.18%
Bootstrap support for Q755Q3 as seed ortholog is 100%.
Bootstrap support for L9L8W4 as seed ortholog is 100%.

Group of orthologs #1291. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q755H7              	100.00%		L8Y9I1              	100.00%
Bootstrap support for Q755H7 as seed ortholog is 100%.
Bootstrap support for L8Y9I1 as seed ortholog is 100%.

Group of orthologs #1292. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q753Z5              	100.00%		L8YAN8              	100.00%
Bootstrap support for Q753Z5 as seed ortholog is 100%.
Bootstrap support for L8YAN8 as seed ortholog is 100%.

Group of orthologs #1293. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q75B96              	100.00%		L8YC83              	100.00%
Bootstrap support for Q75B96 as seed ortholog is 100%.
Bootstrap support for L8YC83 as seed ortholog is 100%.

Group of orthologs #1294. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q75A28              	100.00%		L9JDY3              	100.00%
Bootstrap support for Q75A28 as seed ortholog is 100%.
Bootstrap support for L9JDY3 as seed ortholog is 100%.

Group of orthologs #1295. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q74Z19              	100.00%		L9KK23              	100.00%
Bootstrap support for Q74Z19 as seed ortholog is 100%.
Bootstrap support for L9KK23 as seed ortholog is 100%.

Group of orthologs #1296. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q754T8              	100.00%		L9KJW0              	100.00%
Bootstrap support for Q754T8 as seed ortholog is 100%.
Bootstrap support for L9KJW0 as seed ortholog is 100%.

Group of orthologs #1297. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q759U0              	100.00%		L9KLI8              	100.00%
Bootstrap support for Q759U0 as seed ortholog is 100%.
Bootstrap support for L9KLI8 as seed ortholog is 100%.

Group of orthologs #1298. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:27 T.chinensis:31

Q751A6              	100.00%		L9L882              	100.00%
Bootstrap support for Q751A6 as seed ortholog is 87%.
Bootstrap support for L9L882 as seed ortholog is 86%.

Group of orthologs #1299. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 T.chinensis:85

Q75AY8              	100.00%		L9L757              	100.00%
Bootstrap support for Q75AY8 as seed ortholog is 100%.
Bootstrap support for L9L757 as seed ortholog is 100%.

Group of orthologs #1300. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:84

Q759Z3              	100.00%		L9KPW0              	100.00%
                    	       		L9KKB7              	5.47%
Bootstrap support for Q759Z3 as seed ortholog is 100%.
Bootstrap support for L9KPW0 as seed ortholog is 100%.

Group of orthologs #1301. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:84

Q75C72              	100.00%		L8Y9U5              	100.00%
Bootstrap support for Q75C72 as seed ortholog is 100%.
Bootstrap support for L8Y9U5 as seed ortholog is 100%.

Group of orthologs #1302. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:84

Q751Z7              	100.00%		L9JWX9              	100.00%
Bootstrap support for Q751Z7 as seed ortholog is 100%.
Bootstrap support for L9JWX9 as seed ortholog is 100%.

Group of orthologs #1303. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:84

Q75AD1              	100.00%		L9KLK6              	100.00%
Bootstrap support for Q75AD1 as seed ortholog is 100%.
Bootstrap support for L9KLK6 as seed ortholog is 100%.

Group of orthologs #1304. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 T.chinensis:84

Q753U8              	100.00%		L9L6I8              	100.00%
Bootstrap support for Q753U8 as seed ortholog is 100%.
Bootstrap support for L9L6I8 as seed ortholog is 100%.

Group of orthologs #1305. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q755N3              	100.00%		L9LE73              	100.00%
Q75B82              	100.00%		L8Y7G2              	100.00%
Q757L6              	100.00%		L9L0C6              	100.00%
                    	       		L9L5H2              	100.00%
                    	       		L8Y8H3              	100.00%
                    	       		L9L4Y7              	92.48%
                    	       		L9KKT6              	87.94%
                    	       		L9JD99              	87.47%
                    	       		L9KJP3              	86.38%
                    	       		L9L8D2              	85.99%
                    	       		L9KGS4              	85.79%
                    	       		L9JWH9              	83.27%
                    	       		L9LEA3              	81.63%
                    	       		L9JFS4              	81.32%
                    	       		L8Y8M3              	80.61%
                    	       		L9JEE9              	80.54%
                    	       		L9KWP3              	80.22%
                    	       		L9KW88              	79.59%
                    	       		L9L4H1              	79.38%
                    	       		L9L3H4              	79.08%
                    	       		L9L5L2              	79.08%
                    	       		L9L798              	79.08%
                    	       		L9L5T6              	78.21%
                    	       		L8Y6A5              	76.65%
                    	       		L9L6K1              	75.51%
                    	       		L9JEM0              	74.49%
                    	       		L8Y4K3              	72.96%
                    	       		L9KQ71              	72.45%
                    	       		L8YEX9              	71.60%
                    	       		L9KZ39              	70.82%
                    	       		L9LE69              	70.47%
                    	       		L9JA72              	70.43%
                    	       		L9JZF5              	69.39%
                    	       		L8YI87              	69.26%
                    	       		L9L5I0              	68.37%
                    	       		L9K3R4              	68.09%
                    	       		L8YGR8              	67.69%
                    	       		L8Y054              	66.54%
                    	       		L9K3A0              	63.78%
                    	       		L9L0G7              	61.87%
                    	       		L9LDQ4              	61.09%
                    	       		L9JCF2              	60.31%
                    	       		L9L421              	59.61%
                    	       		L9KMJ4              	55.25%
                    	       		L9KK77              	54.08%
                    	       		L8Y6W2              	52.92%
                    	       		L9L6P8              	52.65%
                    	       		L8Y070              	52.65%
                    	       		L8Y448              	52.53%
                    	       		L9JZ87              	52.37%
                    	       		L9L8H5              	51.75%
                    	       		L9L6X1              	51.53%
                    	       		L8YDL2              	50.58%
                    	       		L9KWA7              	50.19%
                    	       		L8Y9C9              	50.00%
                    	       		L9L135              	46.69%
                    	       		L9JD56              	45.91%
                    	       		L9K822              	44.75%
                    	       		L9KT66              	41.78%
                    	       		L9L875              	41.78%
                    	       		L9L657              	40.47%
                    	       		L9KG34              	39.29%
                    	       		L9JFU6              	38.91%
                    	       		L9JDL1              	38.91%
                    	       		L9KN99              	38.27%
                    	       		L9LDH8              	38.13%
                    	       		L9KX65              	36.22%
                    	       		L9JHT4              	34.69%
                    	       		L9LF27              	33.46%
                    	       		L9L631              	32.14%
                    	       		L9LGD4              	29.81%
                    	       		L9KYK9              	24.90%
                    	       		L9KGD9              	24.49%
                    	       		L9JE76              	22.57%
                    	       		L9L6M7              	22.45%
                    	       		L9L003              	19.90%
                    	       		L9LD72              	18.66%
                    	       		L9KF69              	18.37%
                    	       		L9L4L8              	17.35%
                    	       		L8YA43              	11.73%
                    	       		L9KYM1              	11.28%
Bootstrap support for Q755N3 as seed ortholog is 100%.
Bootstrap support for Q75B82 as seed ortholog is 100%.
Bootstrap support for Q757L6 as seed ortholog is 100%.
Bootstrap support for L9LE73 as seed ortholog is 100%.
Bootstrap support for L8Y7G2 as seed ortholog is 100%.
Bootstrap support for L9L0C6 as seed ortholog is 100%.
Bootstrap support for L9L5H2 as seed ortholog is 100%.
Bootstrap support for L8Y8H3 as seed ortholog is 100%.

Group of orthologs #1306. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:5 T.chinensis:12

Q75DH3              	100.00%		L8YBP9              	100.00%
                    	       		L9KWN4              	49.85%
                    	       		L8YGT2              	31.69%
                    	       		L8Y910              	30.68%
                    	       		L8Y8Y2              	30.27%
                    	       		L8Y8E2              	29.26%
                    	       		L8YD79              	26.64%
                    	       		L8YCW9              	25.83%
                    	       		L8YEU5              	25.13%
                    	       		L8Y9J9              	23.51%
                    	       		L8Y9J2              	13.62%
                    	       		L9KQ01              	7.06%
Bootstrap support for Q75DH3 as seed ortholog is 56%.
Alternative seed ortholog is Q753Q9 (5 bits away from this cluster)
Bootstrap support for L8YBP9 as seed ortholog is 64%.
Alternative seed ortholog is L9KS80 (12 bits away from this cluster)

Group of orthologs #1307. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q75DK1              	100.00%		L9KV22              	100.00%
                    	       		L9KZI3              	62.75%
                    	       		L9KUS3              	36.09%
Bootstrap support for Q75DK1 as seed ortholog is 100%.
Bootstrap support for L9KV22 as seed ortholog is 100%.

Group of orthologs #1308. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q757N0              	100.00%		L8Y4L8              	100.00%
Bootstrap support for Q757N0 as seed ortholog is 100%.
Bootstrap support for L8Y4L8 as seed ortholog is 100%.

Group of orthologs #1309. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q74Z40              	100.00%		L9JGQ3              	100.00%
Bootstrap support for Q74Z40 as seed ortholog is 100%.
Bootstrap support for L9JGQ3 as seed ortholog is 100%.

Group of orthologs #1310. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q75CJ5              	100.00%		L9KGU3              	100.00%
Bootstrap support for Q75CJ5 as seed ortholog is 100%.
Bootstrap support for L9KGU3 as seed ortholog is 100%.

Group of orthologs #1311. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:16

Q75BV0              	100.00%		L9KMP9              	100.00%
Bootstrap support for Q75BV0 as seed ortholog is 100%.
Bootstrap support for L9KMP9 as seed ortholog is 72%.
Alternative seed ortholog is L9L2S5 (16 bits away from this cluster)

Group of orthologs #1312. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q75AD0              	100.00%		L9KRG1              	100.00%
Bootstrap support for Q75AD0 as seed ortholog is 100%.
Bootstrap support for L9KRG1 as seed ortholog is 100%.

Group of orthologs #1313. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 T.chinensis:83

Q75BB8              	100.00%		L9L8A3              	100.00%
Bootstrap support for Q75BB8 as seed ortholog is 100%.
Bootstrap support for L9L8A3 as seed ortholog is 100%.

Group of orthologs #1314. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:82

Q75A69              	100.00%		L9L147              	100.00%
Q759B8              	15.84%		L9KLD8              	45.32%
Bootstrap support for Q75A69 as seed ortholog is 100%.
Bootstrap support for L9L147 as seed ortholog is 100%.

Group of orthologs #1315. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:82

Q75DV6              	100.00%		L8Y6Q3              	100.00%
                    	       		L9L527              	10.26%
Bootstrap support for Q75DV6 as seed ortholog is 100%.
Bootstrap support for L8Y6Q3 as seed ortholog is 100%.

Group of orthologs #1316. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:82

Q755K2              	100.00%		L9JMF4              	100.00%
                    	       		L9JIL0              	37.95%
Bootstrap support for Q755K2 as seed ortholog is 100%.
Bootstrap support for L9JMF4 as seed ortholog is 100%.

Group of orthologs #1317. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:82

Q750P0              	100.00%		L9KLH1              	100.00%
Bootstrap support for Q750P0 as seed ortholog is 100%.
Bootstrap support for L9KLH1 as seed ortholog is 100%.

Group of orthologs #1318. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 T.chinensis:82

Q75AI5              	100.00%		L9K1T0              	100.00%
Bootstrap support for Q75AI5 as seed ortholog is 100%.
Bootstrap support for L9K1T0 as seed ortholog is 100%.

Group of orthologs #1319. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.chinensis:11

Q751A9              	100.00%		L8Y4D7              	100.00%
                    	       		L9JAV7              	39.47%
Bootstrap support for Q751A9 as seed ortholog is 100%.
Bootstrap support for L8Y4D7 as seed ortholog is 56%.
Alternative seed ortholog is L9JIS2 (11 bits away from this cluster)

Group of orthologs #1320. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.chinensis:81

Q751G0              	100.00%		L9JBN3              	100.00%
Bootstrap support for Q751G0 as seed ortholog is 100%.
Bootstrap support for L9JBN3 as seed ortholog is 100%.

Group of orthologs #1321. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.chinensis:81

Q75AV1              	100.00%		L8YBT0              	100.00%
Bootstrap support for Q75AV1 as seed ortholog is 100%.
Bootstrap support for L8YBT0 as seed ortholog is 100%.

Group of orthologs #1322. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.chinensis:81

Q75AB3              	100.00%		L9L1U7              	100.00%
Bootstrap support for Q75AB3 as seed ortholog is 100%.
Bootstrap support for L9L1U7 as seed ortholog is 100%.

Group of orthologs #1323. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.chinensis:81

Q753I0              	100.00%		L9L8H9              	100.00%
Bootstrap support for Q753I0 as seed ortholog is 100%.
Bootstrap support for L9L8H9 as seed ortholog is 100%.

Group of orthologs #1324. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 T.chinensis:81

Q753C9              	100.00%		L9LDS6              	100.00%
Bootstrap support for Q753C9 as seed ortholog is 100%.
Bootstrap support for L9LDS6 as seed ortholog is 100%.

Group of orthologs #1325. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.chinensis:80

Q758Y3              	100.00%		L9L713              	100.00%
                    	       		L8Y517              	15.69%
                    	       		L8Y629              	11.57%
                    	       		L8Y635              	7.98%
Bootstrap support for Q758Y3 as seed ortholog is 100%.
Bootstrap support for L9L713 as seed ortholog is 100%.

Group of orthologs #1326. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.chinensis:80

Q750U4              	100.00%		L8YBQ5              	100.00%
Bootstrap support for Q750U4 as seed ortholog is 100%.
Bootstrap support for L8YBQ5 as seed ortholog is 100%.

Group of orthologs #1327. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.chinensis:80

Q74ZA6              	100.00%		L9JDX5              	100.00%
Bootstrap support for Q74ZA6 as seed ortholog is 100%.
Bootstrap support for L9JDX5 as seed ortholog is 100%.

Group of orthologs #1328. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.chinensis:80

Q75AZ2              	100.00%		L9KJR2              	100.00%
Bootstrap support for Q75AZ2 as seed ortholog is 100%.
Bootstrap support for L9KJR2 as seed ortholog is 100%.

Group of orthologs #1329. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.chinensis:80

Q753W6              	100.00%		L9KW19              	100.00%
Bootstrap support for Q753W6 as seed ortholog is 100%.
Bootstrap support for L9KW19 as seed ortholog is 100%.

Group of orthologs #1330. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 T.chinensis:80

Q75B38              	100.00%		L9L682              	100.00%
Bootstrap support for Q75B38 as seed ortholog is 100%.
Bootstrap support for L9L682 as seed ortholog is 100%.

Group of orthologs #1331. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.chinensis:29

Q755K7              	100.00%		L8Y094              	100.00%
                    	       		L8Y3I3              	100.00%
                    	       		L9KR40              	100.00%
                    	       		L9L7W3              	46.80%
                    	       		L8Y3T4              	45.57%
                    	       		L9KNE3              	38.67%
                    	       		L9JDX0              	35.50%
                    	       		L8Y2P6              	34.24%
                    	       		L9KSC0              	10.59%
                    	       		L8Y4E7              	7.79%
Bootstrap support for Q755K7 as seed ortholog is 100%.
Bootstrap support for L8Y094 as seed ortholog is 90%.
Bootstrap support for L8Y3I3 as seed ortholog is 90%.
Bootstrap support for L9KR40 as seed ortholog is 91%.

Group of orthologs #1332. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:9 T.chinensis:79

Q75A92              	100.00%		L9JDK4              	100.00%
                    	       		L9L7Q9              	45.61%
                    	       		L9LD55              	9.65%
                    	       		L8YHQ8              	6.73%
Bootstrap support for Q75A92 as seed ortholog is 63%.
Alternative seed ortholog is Q754A7 (9 bits away from this cluster)
Bootstrap support for L9JDK4 as seed ortholog is 100%.

Group of orthologs #1333. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.chinensis:79

Q751L5              	100.00%		L9LFZ9              	100.00%
                    	       		L8Y2D7              	46.95%
Bootstrap support for Q751L5 as seed ortholog is 100%.
Bootstrap support for L9LFZ9 as seed ortholog is 100%.

Group of orthologs #1334. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.chinensis:79

Q75DZ3              	100.00%		L9KJC2              	100.00%
Bootstrap support for Q75DZ3 as seed ortholog is 100%.
Bootstrap support for L9KJC2 as seed ortholog is 100%.

Group of orthologs #1335. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.chinensis:79

Q75AB4              	100.00%		L9KTM0              	100.00%
Bootstrap support for Q75AB4 as seed ortholog is 100%.
Bootstrap support for L9KTM0 as seed ortholog is 100%.

Group of orthologs #1336. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 T.chinensis:79

Q75C86              	100.00%		L9L4H2              	100.00%
Bootstrap support for Q75C86 as seed ortholog is 100%.
Bootstrap support for L9L4H2 as seed ortholog is 100%.

Group of orthologs #1337. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.chinensis:78

Q75CV4              	100.00%		L8Y1P3              	100.00%
                    	       		L9JGE6              	52.34%
                    	       		L9KRC9              	46.73%
Bootstrap support for Q75CV4 as seed ortholog is 100%.
Bootstrap support for L8Y1P3 as seed ortholog is 100%.

Group of orthologs #1338. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.chinensis:78

Q74ZB6              	100.00%		L9JCM2              	100.00%
                    	       		L9KJR8              	15.49%
                    	       		L8Y896              	9.70%
Bootstrap support for Q74ZB6 as seed ortholog is 100%.
Bootstrap support for L9JCM2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.chinensis:78

Q75CV6              	100.00%		L8YE62              	100.00%
Bootstrap support for Q75CV6 as seed ortholog is 100%.
Bootstrap support for L8YE62 as seed ortholog is 100%.

Group of orthologs #1340. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 T.chinensis:78

Q74Z25              	100.00%		L9L5G5              	100.00%
Bootstrap support for Q74Z25 as seed ortholog is 100%.
Bootstrap support for L9L5G5 as seed ortholog is 100%.

Group of orthologs #1341. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:77

Q756N9              	100.00%		L8YD38              	100.00%
Bootstrap support for Q756N9 as seed ortholog is 100%.
Bootstrap support for L8YD38 as seed ortholog is 100%.

Group of orthologs #1342. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:77

Q75AV2              	100.00%		L8YB39              	100.00%
Bootstrap support for Q75AV2 as seed ortholog is 100%.
Bootstrap support for L8YB39 as seed ortholog is 100%.

Group of orthologs #1343. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:77

Q75E80              	100.00%		L8Y824              	100.00%
Bootstrap support for Q75E80 as seed ortholog is 100%.
Bootstrap support for L8Y824 as seed ortholog is 100%.

Group of orthologs #1344. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:77

Q757R9              	100.00%		L9KJ56              	100.00%
Bootstrap support for Q757R9 as seed ortholog is 100%.
Bootstrap support for L9KJ56 as seed ortholog is 100%.

Group of orthologs #1345. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:77

Q753S6              	100.00%		L9KN20              	100.00%
Bootstrap support for Q753S6 as seed ortholog is 100%.
Bootstrap support for L9KN20 as seed ortholog is 100%.

Group of orthologs #1346. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:27

Q75DT7              	100.00%		L9KVG9              	100.00%
Bootstrap support for Q75DT7 as seed ortholog is 100%.
Bootstrap support for L9KVG9 as seed ortholog is 83%.

Group of orthologs #1347. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 T.chinensis:77

Q75CR5              	100.00%		L9L313              	100.00%
Bootstrap support for Q75CR5 as seed ortholog is 100%.
Bootstrap support for L9L313 as seed ortholog is 100%.

Group of orthologs #1348. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:76

Q750B7              	100.00%		L8Y9F4              	100.00%
Q751X7              	49.77%		
Q750B8              	48.84%		
Q750B9              	48.65%		
Q75B49              	36.19%		
Q753U5              	34.79%		
Q74Z84              	34.70%		
Q757P2              	32.19%		
Q755W3              	29.58%		
Q752A8              	21.30%		
Q75CQ4              	20.56%		
Q752A7              	19.63%		
Q754B4              	14.23%		
Q75EP1              	10.60%		
Q750W0              	8.74%		
Bootstrap support for Q750B7 as seed ortholog is 100%.
Bootstrap support for L8Y9F4 as seed ortholog is 100%.

Group of orthologs #1349. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:76

Q75AH9              	100.00%		L8XZI9              	100.00%
                    	       		L8Y8K1              	78.39%
                    	       		L8Y318              	66.30%
                    	       		L9JDR1              	53.48%
                    	       		L9KFZ7              	52.01%
                    	       		L9KX37              	41.76%
Bootstrap support for Q75AH9 as seed ortholog is 100%.
Bootstrap support for L8XZI9 as seed ortholog is 100%.

Group of orthologs #1350. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:8

Q75DB2              	100.00%		L9JB14              	100.00%
Q75CX5              	82.66%		L9KNW6              	23.61%
Q75DB1              	81.16%		
Q75CX6              	67.34%		
Bootstrap support for Q75DB2 as seed ortholog is 100%.
Bootstrap support for L9JB14 as seed ortholog is 60%.
Alternative seed ortholog is L8YDH6 (8 bits away from this cluster)

Group of orthologs #1351. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:5

Q754Y9              	100.00%		L8Y5K0              	100.00%
                    	       		L9L6V4              	61.67%
Bootstrap support for Q754Y9 as seed ortholog is 100%.
Bootstrap support for L8Y5K0 as seed ortholog is 55%.
Alternative seed ortholog is L8YEW0 (5 bits away from this cluster)

Group of orthologs #1352. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:76

Q74Z09              	100.00%		L8Y4M4              	100.00%
Bootstrap support for Q74Z09 as seed ortholog is 100%.
Bootstrap support for L8Y4M4 as seed ortholog is 100%.

Group of orthologs #1353. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:76

Q752W4              	100.00%		L9KKF3              	100.00%
Bootstrap support for Q752W4 as seed ortholog is 100%.
Bootstrap support for L9KKF3 as seed ortholog is 100%.

Group of orthologs #1354. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:76

Q75A91              	100.00%		L9KZ03              	100.00%
Bootstrap support for Q75A91 as seed ortholog is 100%.
Bootstrap support for L9KZ03 as seed ortholog is 100%.

Group of orthologs #1355. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 T.chinensis:76

Q74ZZ0              	100.00%		L9L7U3              	100.00%
Bootstrap support for Q74ZZ0 as seed ortholog is 100%.
Bootstrap support for L9L7U3 as seed ortholog is 100%.

Group of orthologs #1356. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.chinensis:18

Q751X8              	100.00%		L9JDE9              	100.00%
                    	       		L9KWM8              	37.62%
                    	       		L9JYY8              	37.13%
Bootstrap support for Q751X8 as seed ortholog is 100%.
Bootstrap support for L9JDE9 as seed ortholog is 90%.

Group of orthologs #1357. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.chinensis:75

Q755X9              	100.00%		L9KG67              	100.00%
                    	       		L9KIR4              	48.14%
Bootstrap support for Q755X9 as seed ortholog is 100%.
Bootstrap support for L9KG67 as seed ortholog is 100%.

Group of orthologs #1358. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.chinensis:75

Q750D9              	100.00%		L9JB79              	100.00%
Bootstrap support for Q750D9 as seed ortholog is 100%.
Bootstrap support for L9JB79 as seed ortholog is 100%.

Group of orthologs #1359. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:29 T.chinensis:75

Q759W7              	100.00%		L9J8N3              	100.00%
Bootstrap support for Q759W7 as seed ortholog is 95%.
Bootstrap support for L9J8N3 as seed ortholog is 100%.

Group of orthologs #1360. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.chinensis:75

Q750J6              	100.00%		L9KYM6              	100.00%
Bootstrap support for Q750J6 as seed ortholog is 100%.
Bootstrap support for L9KYM6 as seed ortholog is 100%.

Group of orthologs #1361. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:34 T.chinensis:75

Q75CP9              	100.00%		L9KU16              	100.00%
Bootstrap support for Q75CP9 as seed ortholog is 88%.
Bootstrap support for L9KU16 as seed ortholog is 100%.

Group of orthologs #1362. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 T.chinensis:30

Q758B6              	100.00%		L9LBZ7              	100.00%
Bootstrap support for Q758B6 as seed ortholog is 100%.
Bootstrap support for L9LBZ7 as seed ortholog is 81%.

Group of orthologs #1363. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.chinensis:74

Q75F04              	100.00%		L9L6V2              	100.00%
                    	       		L9KGH6              	47.47%
                    	       		L9K5F7              	34.81%
                    	       		L9JN20              	21.52%
Bootstrap support for Q75F04 as seed ortholog is 100%.
Bootstrap support for L9L6V2 as seed ortholog is 100%.

Group of orthologs #1364. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.chinensis:8

Q75DE5              	100.00%		L9L6Y9              	100.00%
                    	       		L9L342              	17.68%
Bootstrap support for Q75DE5 as seed ortholog is 100%.
Bootstrap support for L9L6Y9 as seed ortholog is 64%.
Alternative seed ortholog is L9L461 (8 bits away from this cluster)

Group of orthologs #1365. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.chinensis:74

Q755F9              	100.00%		L9KRX0              	100.00%
Bootstrap support for Q755F9 as seed ortholog is 100%.
Bootstrap support for L9KRX0 as seed ortholog is 100%.

Group of orthologs #1366. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 T.chinensis:74

Q74Z52              	100.00%		L9LBG7              	100.00%
Bootstrap support for Q74Z52 as seed ortholog is 100%.
Bootstrap support for L9LBG7 as seed ortholog is 100%.

Group of orthologs #1367. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:73

Q75EG5              	100.00%		L8YG92              	100.00%
                    	       		L9KGL7              	35.89%
                    	       		L9KQ33              	10.89%
Bootstrap support for Q75EG5 as seed ortholog is 100%.
Bootstrap support for L8YG92 as seed ortholog is 100%.

Group of orthologs #1368. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:73

Q75EM9              	100.00%		L9KZV8              	100.00%
                    	       		L9JIC2              	22.11%
                    	       		L9KLA1              	5.58%
Bootstrap support for Q75EM9 as seed ortholog is 100%.
Bootstrap support for L9KZV8 as seed ortholog is 100%.

Group of orthologs #1369. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:11

Q75CB4              	100.00%		L8Y759              	100.00%
                    	       		L9KJL6              	52.95%
Bootstrap support for Q75CB4 as seed ortholog is 100%.
Bootstrap support for L8Y759 as seed ortholog is 68%.
Alternative seed ortholog is L8Y3C7 (11 bits away from this cluster)

Group of orthologs #1370. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:73

Q752R5              	100.00%		L8Y769              	100.00%
Bootstrap support for Q752R5 as seed ortholog is 100%.
Bootstrap support for L8Y769 as seed ortholog is 100%.

Group of orthologs #1371. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:73

Q753A7              	100.00%		L9J9Z4              	100.00%
Bootstrap support for Q753A7 as seed ortholog is 100%.
Bootstrap support for L9J9Z4 as seed ortholog is 100%.

Group of orthologs #1372. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:73

Q756X3              	100.00%		L8YG10              	100.00%
Bootstrap support for Q756X3 as seed ortholog is 100%.
Bootstrap support for L8YG10 as seed ortholog is 100%.

Group of orthologs #1373. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:17

Q755B9              	100.00%		L9KFB9              	100.00%
Bootstrap support for Q755B9 as seed ortholog is 100%.
Bootstrap support for L9KFB9 as seed ortholog is 76%.

Group of orthologs #1374. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 T.chinensis:73

Q752X8              	100.00%		L9KLM8              	100.00%
Bootstrap support for Q752X8 as seed ortholog is 100%.
Bootstrap support for L9KLM8 as seed ortholog is 100%.

Group of orthologs #1375. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.chinensis:72

Q754Y1              	100.00%		L8Y3L7              	100.00%
                    	       		L8Y3C3              	7.75%
Bootstrap support for Q754Y1 as seed ortholog is 100%.
Bootstrap support for L8Y3L7 as seed ortholog is 100%.

Group of orthologs #1376. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.chinensis:72

Q75F09              	100.00%		L9KNU7              	100.00%
                    	       		L9L4G3              	61.25%
Bootstrap support for Q75F09 as seed ortholog is 100%.
Bootstrap support for L9KNU7 as seed ortholog is 100%.

Group of orthologs #1377. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.chinensis:72

Q75AC1              	100.00%		L8YDV3              	100.00%
Bootstrap support for Q75AC1 as seed ortholog is 100%.
Bootstrap support for L8YDV3 as seed ortholog is 100%.

Group of orthologs #1378. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.chinensis:72

Q752J8              	100.00%		L9KFT2              	100.00%
Bootstrap support for Q752J8 as seed ortholog is 100%.
Bootstrap support for L9KFT2 as seed ortholog is 100%.

Group of orthologs #1379. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 T.chinensis:72

Q75DY3              	100.00%		L9KGJ2              	100.00%
Bootstrap support for Q75DY3 as seed ortholog is 100%.
Bootstrap support for L9KGJ2 as seed ortholog is 100%.

Group of orthologs #1380. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:4 T.chinensis:71

Q74ZB5              	100.00%		L9L9A7              	100.00%
                    	       		L9L9C6              	100.00%
                    	       		L9L813              	7.69%
Bootstrap support for Q74ZB5 as seed ortholog is 52%.
Alternative seed ortholog is Q75AY2 (4 bits away from this cluster)
Bootstrap support for L9L9A7 as seed ortholog is 100%.
Bootstrap support for L9L9C6 as seed ortholog is 100%.

Group of orthologs #1381. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.chinensis:71

Q759V8              	100.00%		L9L126              	100.00%
Bootstrap support for Q759V8 as seed ortholog is 100%.
Bootstrap support for L9L126 as seed ortholog is 100%.

Group of orthologs #1382. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 T.chinensis:71

Q758K8              	100.00%		L9L727              	100.00%
Bootstrap support for Q758K8 as seed ortholog is 100%.
Bootstrap support for L9L727 as seed ortholog is 100%.

Group of orthologs #1383. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.chinensis:70

Q75BB9              	100.00%		L8Y253              	100.00%
                    	       		L9JSK1              	25.54%
Bootstrap support for Q75BB9 as seed ortholog is 100%.
Bootstrap support for L8Y253 as seed ortholog is 100%.

Group of orthologs #1384. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.chinensis:70

Q758X2              	100.00%		L9L5B1              	100.00%
                    	       		L9KY23              	32.04%
Bootstrap support for Q758X2 as seed ortholog is 100%.
Bootstrap support for L9L5B1 as seed ortholog is 100%.

Group of orthologs #1385. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.chinensis:70

Q752L8              	100.00%		L8Y0F7              	100.00%
Bootstrap support for Q752L8 as seed ortholog is 100%.
Bootstrap support for L8Y0F7 as seed ortholog is 100%.

Group of orthologs #1386. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.chinensis:70

Q753S7              	100.00%		L9LAN0              	100.00%
Bootstrap support for Q753S7 as seed ortholog is 100%.
Bootstrap support for L9LAN0 as seed ortholog is 100%.

Group of orthologs #1387. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 T.chinensis:70

Q75EY3              	100.00%		L9LC68              	100.00%
Bootstrap support for Q75EY3 as seed ortholog is 100%.
Bootstrap support for L9LC68 as seed ortholog is 100%.

Group of orthologs #1388. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.chinensis:69

Q757I3              	100.00%		L9KRQ2              	100.00%
Q756H9              	20.95%		L9JK86              	36.13%
Q75FA6              	9.22%		L9JH29              	27.79%
Bootstrap support for Q757I3 as seed ortholog is 100%.
Bootstrap support for L9KRQ2 as seed ortholog is 100%.

Group of orthologs #1389. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.chinensis:69

Q759Q9              	100.00%		L9L748              	100.00%
                    	       		L9KS54              	56.51%
Bootstrap support for Q759Q9 as seed ortholog is 100%.
Bootstrap support for L9L748 as seed ortholog is 100%.

Group of orthologs #1390. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 T.chinensis:69

Q752L9              	100.00%		L8YE57              	100.00%
Bootstrap support for Q752L9 as seed ortholog is 100%.
Bootstrap support for L8YE57 as seed ortholog is 100%.

Group of orthologs #1391. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q75EN0              	100.00%		L9JRA1              	100.00%
                    	       		L9JQY6              	34.12%
                    	       		L9JG71              	29.72%
                    	       		L9KXY4              	20.00%
                    	       		L8YGF4              	19.77%
                    	       		L9LA71              	19.66%
                    	       		L8YGB0              	19.32%
                    	       		L9KWP1              	19.32%
                    	       		L9KWH8              	16.95%
                    	       		L9KVK1              	16.84%
                    	       		L9J9Z9              	16.72%
                    	       		L8YAN9              	15.14%
                    	       		L8YBF5              	14.46%
                    	       		L9J940              	14.35%
                    	       		L9J9B8              	13.45%
                    	       		L8YAY4              	13.11%
                    	       		L9J9U7              	10.73%
                    	       		L9KVK3              	10.62%
                    	       		L9LA82              	10.17%
                    	       		L9JDQ7              	10.06%
                    	       		L8Y602              	9.83%
                    	       		L9J924              	9.83%
                    	       		L9KFS9              	9.27%
                    	       		L8YBK4              	8.81%
                    	       		L9KM42              	8.81%
                    	       		L9KIJ6              	8.70%
                    	       		L9KPA1              	8.59%
                    	       		L9L017              	7.12%
                    	       		L9KKE6              	5.54%
                    	       		L8Y985              	5.31%
Bootstrap support for Q75EN0 as seed ortholog is 100%.
Bootstrap support for L9JRA1 as seed ortholog is 100%.

Group of orthologs #1392. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q751U4              	100.00%		L8XZ82              	100.00%
                    	       		L9JAC1              	100.00%
                    	       		L8Y9V3              	83.54%
                    	       		L9L0U6              	78.05%
Bootstrap support for Q751U4 as seed ortholog is 100%.
Bootstrap support for L8XZ82 as seed ortholog is 100%.
Bootstrap support for L9JAC1 as seed ortholog is 100%.

Group of orthologs #1393. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:1

Q75EU7              	100.00%		L9L3G6              	100.00%
                    	       		L8YGK0              	19.76%
Bootstrap support for Q75EU7 as seed ortholog is 100%.
Bootstrap support for L9L3G6 as seed ortholog is 51%.
Alternative seed ortholog is L8Y2V4 (1 bits away from this cluster)

Group of orthologs #1394. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q758M1              	100.00%		L8Y3C0              	100.00%
Bootstrap support for Q758M1 as seed ortholog is 100%.
Bootstrap support for L8Y3C0 as seed ortholog is 100%.

Group of orthologs #1395. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q75CC1              	100.00%		L8YAR6              	100.00%
Bootstrap support for Q75CC1 as seed ortholog is 100%.
Bootstrap support for L8YAR6 as seed ortholog is 100%.

Group of orthologs #1396. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q755J1              	100.00%		L9JBX0              	100.00%
Bootstrap support for Q755J1 as seed ortholog is 100%.
Bootstrap support for L9JBX0 as seed ortholog is 100%.

Group of orthologs #1397. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q757K7              	100.00%		L9JBC3              	100.00%
Bootstrap support for Q757K7 as seed ortholog is 100%.
Bootstrap support for L9JBC3 as seed ortholog is 100%.

Group of orthologs #1398. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q754Z3              	100.00%		L9KA21              	100.00%
Bootstrap support for Q754Z3 as seed ortholog is 100%.
Bootstrap support for L9KA21 as seed ortholog is 100%.

Group of orthologs #1399. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:18 T.chinensis:68

Q755T1              	100.00%		L9KIX4              	100.00%
Bootstrap support for Q755T1 as seed ortholog is 59%.
Alternative seed ortholog is Q75BK0 (18 bits away from this cluster)
Bootstrap support for L9KIX4 as seed ortholog is 100%.

Group of orthologs #1400. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q756U8              	100.00%		L9KM79              	100.00%
Bootstrap support for Q756U8 as seed ortholog is 100%.
Bootstrap support for L9KM79 as seed ortholog is 100%.

Group of orthologs #1401. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 T.chinensis:68

Q754L9              	100.00%		L9LD86              	100.00%
Bootstrap support for Q754L9 as seed ortholog is 100%.
Bootstrap support for L9LD86 as seed ortholog is 100%.

Group of orthologs #1402. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q75BL2              	100.00%		L8Y4H4              	100.00%
                    	       		L9L7D5              	16.42%
Bootstrap support for Q75BL2 as seed ortholog is 100%.
Bootstrap support for L8Y4H4 as seed ortholog is 100%.

Group of orthologs #1403. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q74Z04              	100.00%		L9J9Z1              	100.00%
Bootstrap support for Q74Z04 as seed ortholog is 100%.
Bootstrap support for L9J9Z1 as seed ortholog is 100%.

Group of orthologs #1404. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q753P9              	100.00%		L9KHB0              	100.00%
Bootstrap support for Q753P9 as seed ortholog is 100%.
Bootstrap support for L9KHB0 as seed ortholog is 100%.

Group of orthologs #1405. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q755I2              	100.00%		L9KMB2              	100.00%
Bootstrap support for Q755I2 as seed ortholog is 100%.
Bootstrap support for L9KMB2 as seed ortholog is 100%.

Group of orthologs #1406. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q75B91              	100.00%		L9KYY0              	100.00%
Bootstrap support for Q75B91 as seed ortholog is 100%.
Bootstrap support for L9KYY0 as seed ortholog is 100%.

Group of orthologs #1407. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q753T9              	100.00%		L9L731              	100.00%
Bootstrap support for Q753T9 as seed ortholog is 100%.
Bootstrap support for L9L731 as seed ortholog is 100%.

Group of orthologs #1408. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q751F9              	100.00%		L9LE26              	100.00%
Bootstrap support for Q751F9 as seed ortholog is 100%.
Bootstrap support for L9LE26 as seed ortholog is 100%.

Group of orthologs #1409. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q75BC8              	100.00%		L9L6D0              	100.00%
Bootstrap support for Q75BC8 as seed ortholog is 100%.
Bootstrap support for L9L6D0 as seed ortholog is 100%.

Group of orthologs #1410. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 T.chinensis:67

Q752B9              	100.00%		L9LEB0              	100.00%
Bootstrap support for Q752B9 as seed ortholog is 100%.
Bootstrap support for L9LEB0 as seed ortholog is 100%.

Group of orthologs #1411. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

E7FHG6              	100.00%		L8YG43              	100.00%
                    	       		L9KT64              	25.30%
                    	       		L8Y7G3              	20.96%
Bootstrap support for E7FHG6 as seed ortholog is 100%.
Bootstrap support for L8YG43 as seed ortholog is 100%.

Group of orthologs #1412. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q750U3              	100.00%		L8YHR8              	100.00%
                    	       		L9KJZ5              	23.12%
                    	       		L9KPU6              	11.91%
Bootstrap support for Q750U3 as seed ortholog is 100%.
Bootstrap support for L8YHR8 as seed ortholog is 100%.

Group of orthologs #1413. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q75EC5              	100.00%		L9JGT8              	100.00%
                    	       		L9L606              	15.56%
Bootstrap support for Q75EC5 as seed ortholog is 100%.
Bootstrap support for L9JGT8 as seed ortholog is 100%.

Group of orthologs #1414. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q756J2              	100.00%		L8Y9Z5              	100.00%
Bootstrap support for Q756J2 as seed ortholog is 100%.
Bootstrap support for L8Y9Z5 as seed ortholog is 100%.

Group of orthologs #1415. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q75DC1              	100.00%		L8Y5Y2              	100.00%
Bootstrap support for Q75DC1 as seed ortholog is 100%.
Bootstrap support for L8Y5Y2 as seed ortholog is 100%.

Group of orthologs #1416. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q75A64              	100.00%		L8YDS1              	100.00%
Bootstrap support for Q75A64 as seed ortholog is 100%.
Bootstrap support for L8YDS1 as seed ortholog is 100%.

Group of orthologs #1417. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q751P9              	100.00%		L9KJF7              	100.00%
Bootstrap support for Q751P9 as seed ortholog is 100%.
Bootstrap support for L9KJF7 as seed ortholog is 100%.

Group of orthologs #1418. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q75A53              	100.00%		L9KI82              	100.00%
Bootstrap support for Q75A53 as seed ortholog is 100%.
Bootstrap support for L9KI82 as seed ortholog is 100%.

Group of orthologs #1419. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q756P9              	100.00%		L9KMT2              	100.00%
Bootstrap support for Q756P9 as seed ortholog is 100%.
Bootstrap support for L9KMT2 as seed ortholog is 100%.

Group of orthologs #1420. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q759V6              	100.00%		L9KRI2              	100.00%
Bootstrap support for Q759V6 as seed ortholog is 100%.
Bootstrap support for L9KRI2 as seed ortholog is 100%.

Group of orthologs #1421. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 T.chinensis:66

Q75EU5              	100.00%		L9KQQ8              	100.00%
Bootstrap support for Q75EU5 as seed ortholog is 100%.
Bootstrap support for L9KQQ8 as seed ortholog is 100%.

Group of orthologs #1422. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:65

Q75A84              	100.00%		L9JG55              	100.00%
Bootstrap support for Q75A84 as seed ortholog is 100%.
Bootstrap support for L9JG55 as seed ortholog is 100%.

Group of orthologs #1423. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:65

Q755V5              	100.00%		L9KSI1              	100.00%
Bootstrap support for Q755V5 as seed ortholog is 100%.
Bootstrap support for L9KSI1 as seed ortholog is 100%.

Group of orthologs #1424. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:65

Q756D7              	100.00%		L9KSW2              	100.00%
Bootstrap support for Q756D7 as seed ortholog is 100%.
Bootstrap support for L9KSW2 as seed ortholog is 100%.

Group of orthologs #1425. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 T.chinensis:65

Q757B0              	100.00%		L9KU97              	100.00%
Bootstrap support for Q757B0 as seed ortholog is 100%.
Bootstrap support for L9KU97 as seed ortholog is 100%.

Group of orthologs #1426. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.chinensis:64

Q75F12              	100.00%		L9KYZ3              	100.00%
                    	       		L9KWZ5              	35.14%
Bootstrap support for Q75F12 as seed ortholog is 100%.
Bootstrap support for L9KYZ3 as seed ortholog is 100%.

Group of orthologs #1427. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.chinensis:64

Q75CC7              	100.00%		L9L8Z2              	100.00%
                    	       		L9L8A6              	37.50%
Bootstrap support for Q75CC7 as seed ortholog is 100%.
Bootstrap support for L9L8Z2 as seed ortholog is 100%.

Group of orthologs #1428. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.chinensis:64

Q757F6              	100.00%		L8Y2W1              	100.00%
Bootstrap support for Q757F6 as seed ortholog is 100%.
Bootstrap support for L8Y2W1 as seed ortholog is 100%.

Group of orthologs #1429. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 T.chinensis:64

Q75B09              	100.00%		L9L845              	100.00%
Bootstrap support for Q75B09 as seed ortholog is 100%.
Bootstrap support for L9L845 as seed ortholog is 100%.

Group of orthologs #1430. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:10

Q74ZL2              	100.00%		L9KVA2              	100.00%
                    	       		L9KBE7              	53.04%
                    	       		L8YC99              	26.62%
                    	       		L9KPD7              	25.86%
                    	       		L8YEA3              	25.10%
                    	       		L8YBD0              	24.14%
                    	       		L8YHB7              	23.57%
                    	       		L9KJW5              	23.19%
                    	       		L9KLZ5              	22.81%
                    	       		L9KUX8              	21.48%
                    	       		L9JEH4              	21.29%
                    	       		L9KLP3              	21.10%
                    	       		L8Y525              	20.53%
                    	       		L8YAT2              	20.15%
                    	       		L9KQH3              	19.77%
                    	       		L8YA82              	19.20%
                    	       		L9L9G7              	18.63%
                    	       		L9KPL0              	17.49%
                    	       		L8Y5A3              	16.92%
                    	       		L9KNE1              	15.02%
                    	       		L8YDP8              	12.93%
                    	       		L8Y3A7              	12.55%
                    	       		L9KPP6              	12.17%
                    	       		L9KNV7              	11.60%
                    	       		L8Y4V3              	10.84%
                    	       		L9JGV0              	6.08%
Bootstrap support for Q74ZL2 as seed ortholog is 100%.
Bootstrap support for L9KVA2 as seed ortholog is 69%.
Alternative seed ortholog is L9KKZ8 (10 bits away from this cluster)

Group of orthologs #1431. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:63

Q755V7              	100.00%		L8YAF7              	100.00%
Q756V3              	16.44%		
Bootstrap support for Q755V7 as seed ortholog is 100%.
Bootstrap support for L8YAF7 as seed ortholog is 100%.

Group of orthologs #1432. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:9

Q750L1              	100.00%		L9L9J5              	100.00%
                    	       		L9L734              	11.20%
Bootstrap support for Q750L1 as seed ortholog is 100%.
Bootstrap support for L9L9J5 as seed ortholog is 67%.
Alternative seed ortholog is L8YEC5 (9 bits away from this cluster)

Group of orthologs #1433. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:63

Q74ZP8              	100.00%		L8YCZ0              	100.00%
Bootstrap support for Q74ZP8 as seed ortholog is 100%.
Bootstrap support for L8YCZ0 as seed ortholog is 100%.

Group of orthologs #1434. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:63

Q752S2              	100.00%		L9KZX9              	100.00%
Bootstrap support for Q752S2 as seed ortholog is 100%.
Bootstrap support for L9KZX9 as seed ortholog is 100%.

Group of orthologs #1435. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 T.chinensis:63

Q75CX9              	100.00%		L9LD37              	100.00%
Bootstrap support for Q75CX9 as seed ortholog is 100%.
Bootstrap support for L9LD37 as seed ortholog is 100%.

Group of orthologs #1436. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q754D0              	100.00%		L8Y2N4              	100.00%
                    	       		L8Y073              	62.75%
Bootstrap support for Q754D0 as seed ortholog is 100%.
Bootstrap support for L8Y2N4 as seed ortholog is 100%.

Group of orthologs #1437. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q755D0              	100.00%		L9K8Y4              	100.00%
Bootstrap support for Q755D0 as seed ortholog is 100%.
Bootstrap support for L9K8Y4 as seed ortholog is 100%.

Group of orthologs #1438. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q75BY9              	100.00%		L9JLM6              	100.00%
Bootstrap support for Q75BY9 as seed ortholog is 100%.
Bootstrap support for L9JLM6 as seed ortholog is 100%.

Group of orthologs #1439. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q9HF53              	100.00%		L9KIA9              	100.00%
Bootstrap support for Q9HF53 as seed ortholog is 100%.
Bootstrap support for L9KIA9 as seed ortholog is 100%.

Group of orthologs #1440. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q759C2              	100.00%		L9KS48              	100.00%
Bootstrap support for Q759C2 as seed ortholog is 100%.
Bootstrap support for L9KS48 as seed ortholog is 100%.

Group of orthologs #1441. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q75BK6              	100.00%		L9L8X8              	100.00%
Bootstrap support for Q75BK6 as seed ortholog is 100%.
Bootstrap support for L9L8X8 as seed ortholog is 100%.

Group of orthologs #1442. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 T.chinensis:62

Q75EE8              	100.00%		L9LCY2              	100.00%
Bootstrap support for Q75EE8 as seed ortholog is 100%.
Bootstrap support for L9LCY2 as seed ortholog is 100%.

Group of orthologs #1443. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.chinensis:61

Q759L3              	100.00%		L8YE71              	100.00%
                    	       		L8Y6R6              	75.44%
Bootstrap support for Q759L3 as seed ortholog is 100%.
Bootstrap support for L8YE71 as seed ortholog is 100%.

Group of orthologs #1444. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.chinensis:61

Q752I4              	100.00%		L9KR53              	100.00%
                    	       		L9KYV8              	85.97%
Bootstrap support for Q752I4 as seed ortholog is 100%.
Bootstrap support for L9KR53 as seed ortholog is 100%.

Group of orthologs #1445. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.chinensis:61

Q756K9              	100.00%		L9L3C9              	100.00%
                    	       		L9KH28              	59.15%
Bootstrap support for Q756K9 as seed ortholog is 100%.
Bootstrap support for L9L3C9 as seed ortholog is 100%.

Group of orthologs #1446. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.chinensis:61

Q75AK0              	100.00%		L9L3Y9              	100.00%
                    	       		L9L9S5              	39.94%
Bootstrap support for Q75AK0 as seed ortholog is 100%.
Bootstrap support for L9L3Y9 as seed ortholog is 100%.

Group of orthologs #1447. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.chinensis:61

Q75C68              	100.00%		L8YC86              	100.00%
Bootstrap support for Q75C68 as seed ortholog is 100%.
Bootstrap support for L8YC86 as seed ortholog is 100%.

Group of orthologs #1448. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 T.chinensis:61

Q752Y7              	100.00%		L9KQX8              	100.00%
Bootstrap support for Q752Y7 as seed ortholog is 100%.
Bootstrap support for L9KQX8 as seed ortholog is 100%.

Group of orthologs #1449. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:11 T.chinensis:60

Q757T9              	100.00%		L8Y668              	100.00%
                    	       		L8Y9K3              	20.52%
                    	       		L9KG38              	14.71%
                    	       		L9KPB7              	6.41%
Bootstrap support for Q757T9 as seed ortholog is 76%.
Bootstrap support for L8Y668 as seed ortholog is 100%.

Group of orthologs #1450. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:60

Q754D1              	100.00%		L9KMA8              	100.00%
                    	       		L9L575              	26.15%
                    	       		L9KVZ5              	16.59%
                    	       		L8YED7              	5.77%
Bootstrap support for Q754D1 as seed ortholog is 100%.
Bootstrap support for L9KMA8 as seed ortholog is 100%.

Group of orthologs #1451. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:3

Q758Y7              	100.00%		L8Y680              	100.00%
Bootstrap support for Q758Y7 as seed ortholog is 100%.
Bootstrap support for L8Y680 as seed ortholog is 56%.
Alternative seed ortholog is L9KYK4 (3 bits away from this cluster)

Group of orthologs #1452. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:60

Q75A96              	100.00%		L8Y6P9              	100.00%
Bootstrap support for Q75A96 as seed ortholog is 100%.
Bootstrap support for L8Y6P9 as seed ortholog is 100%.

Group of orthologs #1453. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:60

Q753F5              	100.00%		L9KMC4              	100.00%
Bootstrap support for Q753F5 as seed ortholog is 100%.
Bootstrap support for L9KMC4 as seed ortholog is 100%.

Group of orthologs #1454. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 T.chinensis:60

Q752D8              	100.00%		L9L823              	100.00%
Bootstrap support for Q752D8 as seed ortholog is 100%.
Bootstrap support for L9L823 as seed ortholog is 100%.

Group of orthologs #1455. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.chinensis:59

Q75DI2              	100.00%		L9JF14              	100.00%
                    	       		L9KW58              	41.98%
                    	       		L8YFE4              	37.68%
                    	       		L9L9E3              	36.97%
                    	       		L9KU85              	7.21%
                    	       		L9KV53              	5.41%
                    	       		L9KZK9              	5.11%
                    	       		L9KWJ4              	5.01%
Bootstrap support for Q75DI2 as seed ortholog is 100%.
Bootstrap support for L9JF14 as seed ortholog is 100%.

Group of orthologs #1456. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.chinensis:59

Q74ZE7              	100.00%		L9LCD3              	100.00%
                    	       		L9L0J4              	84.48%
Bootstrap support for Q74ZE7 as seed ortholog is 100%.
Bootstrap support for L9LCD3 as seed ortholog is 100%.

Group of orthologs #1457. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 T.chinensis:59

Q750J3              	100.00%		L9KR71              	100.00%
Bootstrap support for Q750J3 as seed ortholog is 100%.
Bootstrap support for L9KR71 as seed ortholog is 100%.

Group of orthologs #1458. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.chinensis:58

Q750Z4              	100.00%		L8Y920              	100.00%
                    	       		L9L232              	5.00%
Bootstrap support for Q750Z4 as seed ortholog is 100%.
Bootstrap support for L8Y920 as seed ortholog is 100%.

Group of orthologs #1459. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.chinensis:58

Q754A5              	100.00%		L9JDQ9              	100.00%
Bootstrap support for Q754A5 as seed ortholog is 100%.
Bootstrap support for L9JDQ9 as seed ortholog is 100%.

Group of orthologs #1460. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.chinensis:58

Q758M2              	100.00%		L9JY44              	100.00%
Bootstrap support for Q758M2 as seed ortholog is 100%.
Bootstrap support for L9JY44 as seed ortholog is 100%.

Group of orthologs #1461. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.chinensis:58

Q75DN4              	100.00%		L9KHD4              	100.00%
Bootstrap support for Q75DN4 as seed ortholog is 100%.
Bootstrap support for L9KHD4 as seed ortholog is 100%.

Group of orthologs #1462. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 T.chinensis:58

Q756Z4              	100.00%		L9LA05              	100.00%
Bootstrap support for Q756Z4 as seed ortholog is 100%.
Bootstrap support for L9LA05 as seed ortholog is 100%.

Group of orthologs #1463. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:57

Q755M7              	100.00%		L9KMX4              	100.00%
                    	       		L9L4M7              	26.53%
                    	       		L9JCT8              	25.69%
                    	       		L9LDD1              	19.31%
                    	       		L9KLK7              	14.58%
                    	       		L8YDG6              	14.03%
Bootstrap support for Q755M7 as seed ortholog is 100%.
Bootstrap support for L9KMX4 as seed ortholog is 100%.

Group of orthologs #1464. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:9

Q755I6              	100.00%		L8YBG7              	100.00%
                    	       		L9KYJ4              	28.72%
                    	       		L8Y6F9              	27.13%
                    	       		L9JRC4              	27.13%
                    	       		L9JBF7              	13.83%
Bootstrap support for Q755I6 as seed ortholog is 100%.
Bootstrap support for L8YBG7 as seed ortholog is 85%.

Group of orthologs #1465. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:57

Q75DX1              	100.00%		L8YGM2              	100.00%
                    	       		L8YDZ0              	39.00%
Bootstrap support for Q75DX1 as seed ortholog is 100%.
Bootstrap support for L8YGM2 as seed ortholog is 100%.

Group of orthologs #1466. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:57

Q75BZ3              	100.00%		L9JEY7              	100.00%
                    	       		L9LBT5              	41.51%
Bootstrap support for Q75BZ3 as seed ortholog is 100%.
Bootstrap support for L9JEY7 as seed ortholog is 100%.

Group of orthologs #1467. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:57

Q754B3              	100.00%		L9L6P0              	100.00%
                    	       		L9KK09              	31.58%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for L9L6P0 as seed ortholog is 100%.

Group of orthologs #1468. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 T.chinensis:57

Q75F14              	100.00%		L9L077              	100.00%
Bootstrap support for Q75F14 as seed ortholog is 100%.
Bootstrap support for L9L077 as seed ortholog is 100%.

Group of orthologs #1469. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:14 T.chinensis:56

Q752B5              	100.00%		L9KJ88              	100.00%
Q75E68              	36.14%		L9KFQ7              	26.42%
                    	       		L9KVD0              	20.93%
                    	       		L8YCS2              	14.24%
Bootstrap support for Q752B5 as seed ortholog is 66%.
Alternative seed ortholog is Q75BM4 (14 bits away from this cluster)
Bootstrap support for L9KJ88 as seed ortholog is 100%.

Group of orthologs #1470. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q752Y0              	100.00%		L9KNC2              	100.00%
Q75DZ0              	19.07%		L9KWW0              	71.53%
                    	       		L9KT43              	64.41%
Bootstrap support for Q752Y0 as seed ortholog is 100%.
Bootstrap support for L9KNC2 as seed ortholog is 100%.

Group of orthologs #1471. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q75CK7              	100.00%		L8YAV8              	100.00%
                    	       		L9K2N9              	100.00%
                    	       		L9JWB3              	8.28%
Bootstrap support for Q75CK7 as seed ortholog is 100%.
Bootstrap support for L8YAV8 as seed ortholog is 100%.
Bootstrap support for L9K2N9 as seed ortholog is 100%.

Group of orthologs #1472. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:2 T.chinensis:56

Q75BA0              	100.00%		L8Y692              	100.00%
Bootstrap support for Q75BA0 as seed ortholog is 44%.
Alternative seed ortholog is Q750I4 (2 bits away from this cluster)
Bootstrap support for L8Y692 as seed ortholog is 100%.

Group of orthologs #1473. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q75CP1              	100.00%		L9JD34              	100.00%
Bootstrap support for Q75CP1 as seed ortholog is 100%.
Bootstrap support for L9JD34 as seed ortholog is 100%.

Group of orthologs #1474. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q757Z9              	100.00%		L9JU67              	100.00%
Bootstrap support for Q757Z9 as seed ortholog is 100%.
Bootstrap support for L9JU67 as seed ortholog is 100%.

Group of orthologs #1475. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q75DS2              	100.00%		L9KRM7              	100.00%
Bootstrap support for Q75DS2 as seed ortholog is 100%.
Bootstrap support for L9KRM7 as seed ortholog is 100%.

Group of orthologs #1476. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q75C08              	100.00%		L9KY10              	100.00%
Bootstrap support for Q75C08 as seed ortholog is 100%.
Bootstrap support for L9KY10 as seed ortholog is 100%.

Group of orthologs #1477. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q757T5              	100.00%		L9L4I9              	100.00%
Bootstrap support for Q757T5 as seed ortholog is 100%.
Bootstrap support for L9L4I9 as seed ortholog is 100%.

Group of orthologs #1478. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 T.chinensis:56

Q75DX8              	100.00%		L9L1H2              	100.00%
Bootstrap support for Q75DX8 as seed ortholog is 100%.
Bootstrap support for L9L1H2 as seed ortholog is 100%.

Group of orthologs #1479. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:55

Q75F46              	100.00%		L9LCT8              	100.00%
                    	       		L9L8L4              	65.29%
Bootstrap support for Q75F46 as seed ortholog is 100%.
Bootstrap support for L9LCT8 as seed ortholog is 100%.

Group of orthologs #1480. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:55

Q75CT6              	100.00%		L8Y6L2              	100.00%
Bootstrap support for Q75CT6 as seed ortholog is 100%.
Bootstrap support for L8Y6L2 as seed ortholog is 100%.

Group of orthologs #1481. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:55

Q75BB0              	100.00%		L8Y9I3              	100.00%
Bootstrap support for Q75BB0 as seed ortholog is 100%.
Bootstrap support for L8Y9I3 as seed ortholog is 100%.

Group of orthologs #1482. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:4 T.chinensis:55

Q75BR7              	100.00%		L9L521              	100.00%
Bootstrap support for Q75BR7 as seed ortholog is 59%.
Alternative seed ortholog is Q758M9 (4 bits away from this cluster)
Bootstrap support for L9L521 as seed ortholog is 100%.

Group of orthologs #1483. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 T.chinensis:55

Q754J4              	100.00%		L9LBD4              	100.00%
Bootstrap support for Q754J4 as seed ortholog is 100%.
Bootstrap support for L9LBD4 as seed ortholog is 100%.

Group of orthologs #1484. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:4

Q75AG0              	100.00%		L9J9L0              	100.00%
                    	       		L9L891              	9.68%
Bootstrap support for Q75AG0 as seed ortholog is 100%.
Bootstrap support for L9J9L0 as seed ortholog is 61%.
Alternative seed ortholog is L9KHH4 (4 bits away from this cluster)

Group of orthologs #1485. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:54

Q75CY5              	100.00%		L8YCW4              	100.00%
Bootstrap support for Q75CY5 as seed ortholog is 100%.
Bootstrap support for L8YCW4 as seed ortholog is 100%.

Group of orthologs #1486. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:54

Q75BF1              	100.00%		L9KM66              	100.00%
Bootstrap support for Q75BF1 as seed ortholog is 100%.
Bootstrap support for L9KM66 as seed ortholog is 100%.

Group of orthologs #1487. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:54

Q74ZS0              	100.00%		L9KZ94              	100.00%
Bootstrap support for Q74ZS0 as seed ortholog is 100%.
Bootstrap support for L9KZ94 as seed ortholog is 100%.

Group of orthologs #1488. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:54

Q755P5              	100.00%		L9L2Y6              	100.00%
Bootstrap support for Q755P5 as seed ortholog is 100%.
Bootstrap support for L9L2Y6 as seed ortholog is 100%.

Group of orthologs #1489. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:54

D8FGB7              	100.00%		L9L967              	100.00%
Bootstrap support for D8FGB7 as seed ortholog is 100%.
Bootstrap support for L9L967 as seed ortholog is 100%.

Group of orthologs #1490. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 T.chinensis:4

Q756F1              	100.00%		L9L425              	100.00%
Bootstrap support for Q756F1 as seed ortholog is 100%.
Bootstrap support for L9L425 as seed ortholog is 43%.
Alternative seed ortholog is L9L0U4 (4 bits away from this cluster)

Group of orthologs #1491. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.chinensis:53

Q75DY9              	100.00%		L9KZW2              	100.00%
Q755A6              	10.74%		L9JCJ1              	64.00%
                    	       		L9KR22              	60.29%
                    	       		L9L1P8              	41.75%
Bootstrap support for Q75DY9 as seed ortholog is 100%.
Bootstrap support for L9KZW2 as seed ortholog is 100%.

Group of orthologs #1492. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.chinensis:53

Q758F2              	100.00%		L9JFJ0              	100.00%
Q75E23              	27.78%		L9JJ79              	73.37%
Bootstrap support for Q758F2 as seed ortholog is 100%.
Bootstrap support for L9JFJ0 as seed ortholog is 100%.

Group of orthologs #1493. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 T.chinensis:53

Q753X9              	100.00%		L9L837              	100.00%
                    	       		L9KPU2              	30.00%
Bootstrap support for Q753X9 as seed ortholog is 100%.
Bootstrap support for L9L837 as seed ortholog is 100%.

Group of orthologs #1494. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q75CC3              	100.00%		L9L6N7              	100.00%
                    	       		L9KT78              	32.77%
                    	       		L9K006              	23.90%
Bootstrap support for Q75CC3 as seed ortholog is 100%.
Bootstrap support for L9L6N7 as seed ortholog is 100%.

Group of orthologs #1495. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q750T2              	100.00%		L8Y2K5              	100.00%
                    	       		L9J9V4              	23.49%
Bootstrap support for Q750T2 as seed ortholog is 100%.
Bootstrap support for L8Y2K5 as seed ortholog is 100%.

Group of orthologs #1496. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q751P0              	100.00%		L9KB22              	100.00%
                    	       		L9KMA0              	23.96%
Bootstrap support for Q751P0 as seed ortholog is 100%.
Bootstrap support for L9KB22 as seed ortholog is 100%.

Group of orthologs #1497. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q753R2              	100.00%		L9KVT8              	100.00%
                    	       		L8Y4C5              	48.79%
Bootstrap support for Q753R2 as seed ortholog is 100%.
Bootstrap support for L9KVT8 as seed ortholog is 100%.

Group of orthologs #1498. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q752C1              	100.00%		L8Y555              	100.00%
Bootstrap support for Q752C1 as seed ortholog is 100%.
Bootstrap support for L8Y555 as seed ortholog is 100%.

Group of orthologs #1499. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q75A58              	100.00%		L8YBA7              	100.00%
Bootstrap support for Q75A58 as seed ortholog is 100%.
Bootstrap support for L8YBA7 as seed ortholog is 100%.

Group of orthologs #1500. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 T.chinensis:52

Q75BG7              	100.00%		L8YFF5              	100.00%
Bootstrap support for Q75BG7 as seed ortholog is 100%.
Bootstrap support for L8YFF5 as seed ortholog is 100%.

Group of orthologs #1501. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.chinensis:51

Q75CL6              	100.00%		L9L045              	100.00%
                    	       		L9JGA8              	96.39%
                    	       		L8Y8R2              	92.42%
                    	       		L8Y8T1              	87.36%
                    	       		L9LBU2              	83.03%
                    	       		L8Y8X3              	80.51%
                    	       		L9L063              	77.26%
                    	       		L9KQS7              	73.29%
                    	       		L9JUD5              	71.12%
                    	       		L8Y5R3              	56.68%
                    	       		L9J9D7              	51.26%
                    	       		L9KNL0              	49.46%
                    	       		L9JKC3              	41.88%
                    	       		L9KQI4              	41.16%
                    	       		L9KBD6              	31.77%
Bootstrap support for Q75CL6 as seed ortholog is 100%.
Bootstrap support for L9L045 as seed ortholog is 100%.

Group of orthologs #1502. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.chinensis:51

D8FGE3              	100.00%		L9JD24              	100.00%
Bootstrap support for D8FGE3 as seed ortholog is 100%.
Bootstrap support for L9JD24 as seed ortholog is 100%.

Group of orthologs #1503. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 T.chinensis:51

Q74ZH5              	100.00%		L9KTY3              	100.00%
Bootstrap support for Q74ZH5 as seed ortholog is 100%.
Bootstrap support for L9KTY3 as seed ortholog is 100%.

Group of orthologs #1504. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.chinensis:50

Q753X6              	100.00%		L9KV01              	100.00%
                    	       		L9KM59              	22.66%
Bootstrap support for Q753X6 as seed ortholog is 100%.
Bootstrap support for L9KV01 as seed ortholog is 100%.

Group of orthologs #1505. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.chinensis:50

Q75FA7              	100.00%		L8Y7D3              	100.00%
Bootstrap support for Q75FA7 as seed ortholog is 100%.
Bootstrap support for L8Y7D3 as seed ortholog is 100%.

Group of orthologs #1506. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 T.chinensis:50

Q75C74              	100.00%		L9KPN0              	100.00%
Bootstrap support for Q75C74 as seed ortholog is 100%.
Bootstrap support for L9KPN0 as seed ortholog is 100%.

Group of orthologs #1507. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:49

Q752V2              	100.00%		L9L3F2              	100.00%
                    	       		L9JWY4              	11.22%
                    	       		L9LCC2              	11.22%
                    	       		L8YFX6              	10.26%
                    	       		L8YAQ5              	9.43%
                    	       		L9JE99              	5.01%
Bootstrap support for Q752V2 as seed ortholog is 100%.
Bootstrap support for L9L3F2 as seed ortholog is 100%.

Group of orthologs #1508. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:49

Q751W5              	100.00%		L8Y731              	100.00%
Bootstrap support for Q751W5 as seed ortholog is 100%.
Bootstrap support for L8Y731 as seed ortholog is 100%.

Group of orthologs #1509. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:49

Q756Y9              	100.00%		L9J8R9              	100.00%
Bootstrap support for Q756Y9 as seed ortholog is 100%.
Bootstrap support for L9J8R9 as seed ortholog is 100%.

Group of orthologs #1510. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 T.chinensis:49

Q75AI6              	100.00%		L9JP60              	100.00%
Bootstrap support for Q75AI6 as seed ortholog is 100%.
Bootstrap support for L9JP60 as seed ortholog is 100%.

Group of orthologs #1511. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 T.chinensis:48

Q758Y1              	100.00%		L8Y3C1              	100.00%
Bootstrap support for Q758Y1 as seed ortholog is 100%.
Bootstrap support for L8Y3C1 as seed ortholog is 100%.

Group of orthologs #1512. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.chinensis:47

Q74ZX8              	100.00%		L9L4T3              	100.00%
                    	       		L9KMF3              	91.35%
Bootstrap support for Q74ZX8 as seed ortholog is 100%.
Bootstrap support for L9L4T3 as seed ortholog is 100%.

Group of orthologs #1513. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.chinensis:47

Q75A04              	100.00%		L8Y4W8              	100.00%
Bootstrap support for Q75A04 as seed ortholog is 100%.
Bootstrap support for L8Y4W8 as seed ortholog is 100%.

Group of orthologs #1514. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 T.chinensis:47

Q756B6              	100.00%		L9L3N6              	100.00%
Bootstrap support for Q756B6 as seed ortholog is 100%.
Bootstrap support for L9L3N6 as seed ortholog is 100%.

Group of orthologs #1515. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 T.chinensis:46

Q75CS3              	100.00%		L9LAK4              	100.00%
Bootstrap support for Q75CS3 as seed ortholog is 100%.
Bootstrap support for L9LAK4 as seed ortholog is 100%.

Group of orthologs #1516. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 T.chinensis:45

Q75DU7              	100.00%		L9KSS3              	100.00%
Bootstrap support for Q75DU7 as seed ortholog is 100%.
Bootstrap support for L9KSS3 as seed ortholog is 100%.

Group of orthologs #1517. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.chinensis:44

Q75CM9              	100.00%		L9LAZ2              	100.00%
                    	       		L9L0J7              	15.24%
Bootstrap support for Q75CM9 as seed ortholog is 100%.
Bootstrap support for L9LAZ2 as seed ortholog is 100%.

Group of orthologs #1518. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 T.chinensis:44

Q75AT9              	100.00%		L9KHV2              	100.00%
Bootstrap support for Q75AT9 as seed ortholog is 100%.
Bootstrap support for L9KHV2 as seed ortholog is 100%.

Group of orthologs #1519. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 T.chinensis:43

Q750F2              	100.00%		L9LCL5              	100.00%
Bootstrap support for Q750F2 as seed ortholog is 100%.
Bootstrap support for L9LCL5 as seed ortholog is 100%.

Group of orthologs #1520. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:42

Q8NJR2              	100.00%		L9JKE7              	100.00%
                    	       		L9LCE4              	100.00%
                    	       		L9LFI5              	48.53%
Bootstrap support for Q8NJR2 as seed ortholog is 100%.
Bootstrap support for L9JKE7 as seed ortholog is 100%.
Bootstrap support for L9LCE4 as seed ortholog is 100%.

Group of orthologs #1521. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:42

Q754M8              	100.00%		L8Y6Z7              	100.00%
                    	       		L9KM11              	63.27%
Bootstrap support for Q754M8 as seed ortholog is 100%.
Bootstrap support for L8Y6Z7 as seed ortholog is 100%.

Group of orthologs #1522. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:42

Q758W9              	100.00%		L9KY11              	100.00%
                    	       		L9KUQ8              	19.23%
Bootstrap support for Q758W9 as seed ortholog is 100%.
Bootstrap support for L9KY11 as seed ortholog is 100%.

Group of orthologs #1523. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:42

Q75BN7              	100.00%		L8YGH5              	100.00%
Bootstrap support for Q75BN7 as seed ortholog is 100%.
Bootstrap support for L8YGH5 as seed ortholog is 100%.

Group of orthologs #1524. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 T.chinensis:42

Q75AI8              	100.00%		L9JDA4              	100.00%
Bootstrap support for Q75AI8 as seed ortholog is 100%.
Bootstrap support for L9JDA4 as seed ortholog is 100%.

Group of orthologs #1525. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 T.chinensis:41

Q757F1              	100.00%		L8Y3P2              	100.00%
                    	       		L8Y6Y0              	85.56%
Bootstrap support for Q757F1 as seed ortholog is 100%.
Bootstrap support for L8Y3P2 as seed ortholog is 100%.

Group of orthologs #1526. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.chinensis:40

Q75CT7              	100.00%		L9KL20              	100.00%
                    	       		L9KRQ4              	35.22%
                    	       		L9JCA5              	18.22%
                    	       		L8YAT5              	14.57%
Bootstrap support for Q75CT7 as seed ortholog is 100%.
Bootstrap support for L9KL20 as seed ortholog is 100%.

Group of orthologs #1527. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 T.chinensis:40

Q758W7              	100.00%		L9JSM4              	100.00%
Bootstrap support for Q758W7 as seed ortholog is 100%.
Bootstrap support for L9JSM4 as seed ortholog is 100%.