###################################
1717 groups of orthologs
1836 in-paralogs from A.gossypii
2527 in-paralogs from P.ramorum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3046 bits
Score difference with first non-orthologous sequence - A.gossypii:3046 P.ramorum:3046

Q75D15              	100.00%		H3G8I9              	100.00%
Bootstrap support for Q75D15 as seed ortholog is 100%.
Bootstrap support for H3G8I9 as seed ortholog is 100%.

Group of orthologs #2. Best score 2267 bits
Score difference with first non-orthologous sequence - A.gossypii:2267 P.ramorum:1112

Q9C1M7              	100.00%		H3GM82              	100.00%
Bootstrap support for Q9C1M7 as seed ortholog is 100%.
Bootstrap support for H3GM82 as seed ortholog is 100%.

Group of orthologs #3. Best score 1972 bits
Score difference with first non-orthologous sequence - A.gossypii:1972 P.ramorum:1972

Q74ZY4              	100.00%		H3GJC4              	100.00%
Bootstrap support for Q74ZY4 as seed ortholog is 100%.
Bootstrap support for H3GJC4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1826 bits
Score difference with first non-orthologous sequence - A.gossypii:1826 P.ramorum:1826

Q75A34              	100.00%		H3GA78              	100.00%
Bootstrap support for Q75A34 as seed ortholog is 100%.
Bootstrap support for H3GA78 as seed ortholog is 100%.

Group of orthologs #5. Best score 1720 bits
Score difference with first non-orthologous sequence - A.gossypii:1720 P.ramorum:1720

Q75EK8              	100.00%		H3GWA7              	100.00%
Bootstrap support for Q75EK8 as seed ortholog is 100%.
Bootstrap support for H3GWA7 as seed ortholog is 100%.

Group of orthologs #6. Best score 1593 bits
Score difference with first non-orthologous sequence - A.gossypii:1593 P.ramorum:1593

Q753A4              	100.00%		H3G802              	100.00%
Bootstrap support for Q753A4 as seed ortholog is 100%.
Bootstrap support for H3G802 as seed ortholog is 100%.

Group of orthologs #7. Best score 1565 bits
Score difference with first non-orthologous sequence - A.gossypii:469 P.ramorum:1565

Q75BK8              	100.00%		H3G6H0              	100.00%
Bootstrap support for Q75BK8 as seed ortholog is 100%.
Bootstrap support for H3G6H0 as seed ortholog is 100%.

Group of orthologs #8. Best score 1391 bits
Score difference with first non-orthologous sequence - A.gossypii:1391 P.ramorum:1391

Q759I7              	100.00%		H3GNE8              	100.00%
Bootstrap support for Q759I7 as seed ortholog is 100%.
Bootstrap support for H3GNE8 as seed ortholog is 100%.

Group of orthologs #9. Best score 1382 bits
Score difference with first non-orthologous sequence - A.gossypii:1382 P.ramorum:1201

Q753Q4              	100.00%		H3GA07              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for H3GA07 as seed ortholog is 100%.

Group of orthologs #10. Best score 1382 bits
Score difference with first non-orthologous sequence - A.gossypii:1382 P.ramorum:1382

Q756K2              	100.00%		H3G8F7              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 100%.
Bootstrap support for H3G8F7 as seed ortholog is 100%.

Group of orthologs #11. Best score 1351 bits
Score difference with first non-orthologous sequence - A.gossypii:1351 P.ramorum:836

Q756A8              	100.00%		H3G958              	100.00%
Bootstrap support for Q756A8 as seed ortholog is 100%.
Bootstrap support for H3G958 as seed ortholog is 100%.

Group of orthologs #12. Best score 1338 bits
Score difference with first non-orthologous sequence - A.gossypii:255 P.ramorum:648

Q74ZT5              	100.00%		H3G6V1              	100.00%
Bootstrap support for Q74ZT5 as seed ortholog is 99%.
Bootstrap support for H3G6V1 as seed ortholog is 100%.

Group of orthologs #13. Best score 1328 bits
Score difference with first non-orthologous sequence - A.gossypii:1328 P.ramorum:1328

Q752B8              	100.00%		H3G7C4              	100.00%
Bootstrap support for Q752B8 as seed ortholog is 100%.
Bootstrap support for H3G7C4 as seed ortholog is 100%.

Group of orthologs #14. Best score 1301 bits
Score difference with first non-orthologous sequence - A.gossypii:1301 P.ramorum:1171

Q75B52              	100.00%		H3G9F7              	100.00%
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for H3G9F7 as seed ortholog is 100%.

Group of orthologs #15. Best score 1292 bits
Score difference with first non-orthologous sequence - A.gossypii:1292 P.ramorum:1292

Q755G1              	100.00%		H3GFV5              	100.00%
                    	       		H3GFG1              	84.89%
                    	       		H3H6B1              	50.31%
Bootstrap support for Q755G1 as seed ortholog is 100%.
Bootstrap support for H3GFV5 as seed ortholog is 100%.

Group of orthologs #16. Best score 1186 bits
Score difference with first non-orthologous sequence - A.gossypii:1186 P.ramorum:1186

Q75ED6              	100.00%		H3G968              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for H3G968 as seed ortholog is 100%.

Group of orthologs #17. Best score 1132 bits
Score difference with first non-orthologous sequence - A.gossypii:1132 P.ramorum:1132

Q759A3              	100.00%		H3H1S7              	100.00%
Bootstrap support for Q759A3 as seed ortholog is 100%.
Bootstrap support for H3H1S7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1115 bits
Score difference with first non-orthologous sequence - A.gossypii:1115 P.ramorum:1115

Q75DB0              	100.00%		H3GAQ5              	100.00%
Bootstrap support for Q75DB0 as seed ortholog is 100%.
Bootstrap support for H3GAQ5 as seed ortholog is 100%.

Group of orthologs #19. Best score 1092 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.ramorum:1092

Q75AI4              	100.00%		H3GA16              	100.00%
Bootstrap support for Q75AI4 as seed ortholog is 100%.
Bootstrap support for H3GA16 as seed ortholog is 100%.

Group of orthologs #20. Best score 1074 bits
Score difference with first non-orthologous sequence - A.gossypii:1074 P.ramorum:207

Q755V8              	100.00%		H3G7M6              	100.00%
Bootstrap support for Q755V8 as seed ortholog is 100%.
Bootstrap support for H3G7M6 as seed ortholog is 99%.

Group of orthologs #21. Best score 1072 bits
Score difference with first non-orthologous sequence - A.gossypii:778 P.ramorum:464

Q754C8              	100.00%		H3G8I7              	100.00%
Bootstrap support for Q754C8 as seed ortholog is 100%.
Bootstrap support for H3G8I7 as seed ortholog is 100%.

Group of orthologs #22. Best score 1054 bits
Score difference with first non-orthologous sequence - A.gossypii:1054 P.ramorum:712

Q754B2              	100.00%		H3G7S3              	100.00%
Bootstrap support for Q754B2 as seed ortholog is 100%.
Bootstrap support for H3G7S3 as seed ortholog is 100%.

Group of orthologs #23. Best score 1050 bits
Score difference with first non-orthologous sequence - A.gossypii:1050 P.ramorum:1050

Q74Z60              	100.00%		H3G9W7              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for H3G9W7 as seed ortholog is 100%.

Group of orthologs #24. Best score 1017 bits
Score difference with first non-orthologous sequence - A.gossypii:1017 P.ramorum:1017

Q757C8              	100.00%		H3H4G0              	100.00%
Bootstrap support for Q757C8 as seed ortholog is 100%.
Bootstrap support for H3H4G0 as seed ortholog is 100%.

Group of orthologs #25. Best score 1005 bits
Score difference with first non-orthologous sequence - A.gossypii:1005 P.ramorum:1005

Q758E3              	100.00%		H3GEP5              	100.00%
                    	       		H3H7Q1              	96.25%
                    	       		H3G6A8              	27.06%
Bootstrap support for Q758E3 as seed ortholog is 100%.
Bootstrap support for H3GEP5 as seed ortholog is 100%.

Group of orthologs #26. Best score 972 bits
Score difference with first non-orthologous sequence - A.gossypii:972 P.ramorum:972

Q74ZZ1              	100.00%		H3GHV1              	100.00%
Bootstrap support for Q74ZZ1 as seed ortholog is 100%.
Bootstrap support for H3GHV1 as seed ortholog is 100%.

Group of orthologs #27. Best score 968 bits
Score difference with first non-orthologous sequence - A.gossypii:968 P.ramorum:968

Q75DS1              	100.00%		H3G5P5              	100.00%
Bootstrap support for Q75DS1 as seed ortholog is 100%.
Bootstrap support for H3G5P5 as seed ortholog is 100%.

Group of orthologs #28. Best score 960 bits
Score difference with first non-orthologous sequence - A.gossypii:960 P.ramorum:243

Q75EP5              	100.00%		H3GAQ3              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for H3GAQ3 as seed ortholog is 99%.

Group of orthologs #29. Best score 951 bits
Score difference with first non-orthologous sequence - A.gossypii:201 P.ramorum:152

Q756R7              	100.00%		H3GB49              	100.00%
Q754F6              	34.46%		H3GB15              	81.84%
                    	       		H3G9G6              	31.70%
Bootstrap support for Q756R7 as seed ortholog is 99%.
Bootstrap support for H3GB49 as seed ortholog is 99%.

Group of orthologs #30. Best score 949 bits
Score difference with first non-orthologous sequence - A.gossypii:949 P.ramorum:949

Q759E3              	100.00%		H3G976              	100.00%
Bootstrap support for Q759E3 as seed ortholog is 100%.
Bootstrap support for H3G976 as seed ortholog is 100%.

Group of orthologs #31. Best score 946 bits
Score difference with first non-orthologous sequence - A.gossypii:594 P.ramorum:946

Q755K6              	100.00%		H3GAM4              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for H3GAM4 as seed ortholog is 100%.

Group of orthologs #32. Best score 940 bits
Score difference with first non-orthologous sequence - A.gossypii:940 P.ramorum:339

Q752Y8              	100.00%		H3G877              	100.00%
Bootstrap support for Q752Y8 as seed ortholog is 100%.
Bootstrap support for H3G877 as seed ortholog is 100%.

Group of orthologs #33. Best score 937 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:937

Q75AE9              	100.00%		H3G9W6              	100.00%
Bootstrap support for Q75AE9 as seed ortholog is 99%.
Bootstrap support for H3G9W6 as seed ortholog is 100%.

Group of orthologs #34. Best score 929 bits
Score difference with first non-orthologous sequence - A.gossypii:348 P.ramorum:230

Q75EQ9              	100.00%		H3G987              	100.00%
Bootstrap support for Q75EQ9 as seed ortholog is 100%.
Bootstrap support for H3G987 as seed ortholog is 99%.

Group of orthologs #35. Best score 918 bits
Score difference with first non-orthologous sequence - A.gossypii:918 P.ramorum:918

Q75A42              	100.00%		H3G9M7              	100.00%
Bootstrap support for Q75A42 as seed ortholog is 100%.
Bootstrap support for H3G9M7 as seed ortholog is 100%.

Group of orthologs #36. Best score 906 bits
Score difference with first non-orthologous sequence - A.gossypii:906 P.ramorum:906

Q75AP8              	100.00%		H3GA87              	100.00%
Bootstrap support for Q75AP8 as seed ortholog is 100%.
Bootstrap support for H3GA87 as seed ortholog is 100%.

Group of orthologs #37. Best score 881 bits
Score difference with first non-orthologous sequence - A.gossypii:881 P.ramorum:881

Q75DS7              	100.00%		H3G5R3              	100.00%
Bootstrap support for Q75DS7 as seed ortholog is 100%.
Bootstrap support for H3G5R3 as seed ortholog is 100%.

Group of orthologs #38. Best score 871 bits
Score difference with first non-orthologous sequence - A.gossypii:871 P.ramorum:222

Q755Z3              	100.00%		H3GAB7              	100.00%
Bootstrap support for Q755Z3 as seed ortholog is 100%.
Bootstrap support for H3GAB7 as seed ortholog is 99%.

Group of orthologs #39. Best score 863 bits
Score difference with first non-orthologous sequence - A.gossypii:863 P.ramorum:276

Q8J2M3              	100.00%		H3G966              	100.00%
Bootstrap support for Q8J2M3 as seed ortholog is 100%.
Bootstrap support for H3G966 as seed ortholog is 100%.

Group of orthologs #40. Best score 847 bits
Score difference with first non-orthologous sequence - A.gossypii:847 P.ramorum:664

Q75C64              	100.00%		H3GIQ9              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for H3GIQ9 as seed ortholog is 100%.

Group of orthologs #41. Best score 844 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:182

Q750B0              	100.00%		H3GKM1              	100.00%
Bootstrap support for Q750B0 as seed ortholog is 98%.
Bootstrap support for H3GKM1 as seed ortholog is 99%.

Group of orthologs #42. Best score 839 bits
Score difference with first non-orthologous sequence - A.gossypii:839 P.ramorum:839

Q75DV0              	100.00%		H3GWL8              	100.00%
Bootstrap support for Q75DV0 as seed ortholog is 100%.
Bootstrap support for H3GWL8 as seed ortholog is 100%.

Group of orthologs #43. Best score 822 bits
Score difference with first non-orthologous sequence - A.gossypii:740 P.ramorum:735

Q74ZS3              	100.00%		H3G7J9              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for H3G7J9 as seed ortholog is 100%.

Group of orthologs #44. Best score 814 bits
Score difference with first non-orthologous sequence - A.gossypii:814 P.ramorum:396

Q759B4              	100.00%		H3G795              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for H3G795 as seed ortholog is 100%.

Group of orthologs #45. Best score 813 bits
Score difference with first non-orthologous sequence - A.gossypii:813 P.ramorum:813

Q74Z48              	100.00%		H3G891              	100.00%
Bootstrap support for Q74Z48 as seed ortholog is 100%.
Bootstrap support for H3G891 as seed ortholog is 100%.

Group of orthologs #46. Best score 812 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:180

Q75EV6              	100.00%		H3GH83              	100.00%
Bootstrap support for Q75EV6 as seed ortholog is 85%.
Bootstrap support for H3GH83 as seed ortholog is 99%.

Group of orthologs #47. Best score 811 bits
Score difference with first non-orthologous sequence - A.gossypii:811 P.ramorum:811

Q755D6              	100.00%		H3GTR2              	100.00%
Bootstrap support for Q755D6 as seed ortholog is 100%.
Bootstrap support for H3GTR2 as seed ortholog is 100%.

Group of orthologs #48. Best score 805 bits
Score difference with first non-orthologous sequence - A.gossypii:692 P.ramorum:613

Q75CZ5              	100.00%		H3G9L2              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 100%.
Bootstrap support for H3G9L2 as seed ortholog is 100%.

Group of orthologs #49. Best score 802 bits
Score difference with first non-orthologous sequence - A.gossypii:324 P.ramorum:189

Q75E97              	100.00%		H3G933              	100.00%
Bootstrap support for Q75E97 as seed ortholog is 100%.
Bootstrap support for H3G933 as seed ortholog is 99%.

Group of orthologs #50. Best score 794 bits
Score difference with first non-orthologous sequence - A.gossypii:794 P.ramorum:723

Q75F16              	100.00%		H3G7T4              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for H3G7T4 as seed ortholog is 100%.

Group of orthologs #51. Best score 777 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.ramorum:231

Q753R1              	100.00%		H3G8C0              	100.00%
Bootstrap support for Q753R1 as seed ortholog is 100%.
Bootstrap support for H3G8C0 as seed ortholog is 100%.

Group of orthologs #52. Best score 771 bits
Score difference with first non-orthologous sequence - A.gossypii:771 P.ramorum:529

Q74ZT4              	100.00%		H3G8C6              	100.00%
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for H3G8C6 as seed ortholog is 100%.

Group of orthologs #53. Best score 755 bits
Score difference with first non-orthologous sequence - A.gossypii:427 P.ramorum:318

Q758Q4              	100.00%		H3GAX1              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 100%.
Bootstrap support for H3GAX1 as seed ortholog is 99%.

Group of orthologs #54. Best score 752 bits
Score difference with first non-orthologous sequence - A.gossypii:752 P.ramorum:752

Q74ZH1              	100.00%		H3G6H1              	100.00%
Bootstrap support for Q74ZH1 as seed ortholog is 100%.
Bootstrap support for H3G6H1 as seed ortholog is 100%.

Group of orthologs #55. Best score 748 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:7

Q759C7              	100.00%		H3GQ80              	100.00%
                    	       		H3G823              	25.78%
Bootstrap support for Q759C7 as seed ortholog is 86%.
Bootstrap support for H3GQ80 as seed ortholog is 45%.
Alternative seed ortholog is H3GP37 (7 bits away from this cluster)

Group of orthologs #56. Best score 746 bits
Score difference with first non-orthologous sequence - A.gossypii:746 P.ramorum:746

Q753N2              	100.00%		H3GAU9              	100.00%
Bootstrap support for Q753N2 as seed ortholog is 100%.
Bootstrap support for H3GAU9 as seed ortholog is 100%.

Group of orthologs #57. Best score 746 bits
Score difference with first non-orthologous sequence - A.gossypii:746 P.ramorum:746

Q754A3              	100.00%		H3GZH1              	100.00%
Bootstrap support for Q754A3 as seed ortholog is 100%.
Bootstrap support for H3GZH1 as seed ortholog is 100%.

Group of orthologs #58. Best score 745 bits
Score difference with first non-orthologous sequence - A.gossypii:745 P.ramorum:745

Q75CP0              	100.00%		H3G862              	100.00%
Q756S6              	35.04%		
Bootstrap support for Q75CP0 as seed ortholog is 100%.
Bootstrap support for H3G862 as seed ortholog is 100%.

Group of orthologs #59. Best score 740 bits
Score difference with first non-orthologous sequence - A.gossypii:241 P.ramorum:158

Q759P9              	100.00%		H3G7A2              	100.00%
Bootstrap support for Q759P9 as seed ortholog is 100%.
Bootstrap support for H3G7A2 as seed ortholog is 99%.

Group of orthologs #60. Best score 740 bits
Score difference with first non-orthologous sequence - A.gossypii:740 P.ramorum:740

Q75EM2              	100.00%		H3GD86              	100.00%
Bootstrap support for Q75EM2 as seed ortholog is 100%.
Bootstrap support for H3GD86 as seed ortholog is 100%.

Group of orthologs #61. Best score 738 bits
Score difference with first non-orthologous sequence - A.gossypii:738 P.ramorum:738

Q74ZW9              	100.00%		H3GHV9              	100.00%
Bootstrap support for Q74ZW9 as seed ortholog is 100%.
Bootstrap support for H3GHV9 as seed ortholog is 100%.

Group of orthologs #62. Best score 737 bits
Score difference with first non-orthologous sequence - A.gossypii:329 P.ramorum:292

Q752N7              	100.00%		H3GSL8              	100.00%
Q754V7              	22.48%		
Bootstrap support for Q752N7 as seed ortholog is 100%.
Bootstrap support for H3GSL8 as seed ortholog is 100%.

Group of orthologs #63. Best score 736 bits
Score difference with first non-orthologous sequence - A.gossypii:736 P.ramorum:736

Q757E6              	100.00%		H3GLZ7              	100.00%
Bootstrap support for Q757E6 as seed ortholog is 100%.
Bootstrap support for H3GLZ7 as seed ortholog is 100%.

Group of orthologs #64. Best score 726 bits
Score difference with first non-orthologous sequence - A.gossypii:407 P.ramorum:108

Q75CF8              	100.00%		H3GR76              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 100%.
Bootstrap support for H3GR76 as seed ortholog is 97%.

Group of orthologs #65. Best score 722 bits
Score difference with first non-orthologous sequence - A.gossypii:722 P.ramorum:722

Q752K1              	100.00%		H3G9D6              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for H3G9D6 as seed ortholog is 100%.

Group of orthologs #66. Best score 721 bits
Score difference with first non-orthologous sequence - A.gossypii:721 P.ramorum:373

Q750T7              	100.00%		H3GB63              	100.00%
Q758X0              	6.49%		H3GAK4              	90.99%
                    	       		H3GAK3              	77.17%
                    	       		H3H1K9              	76.40%
Bootstrap support for Q750T7 as seed ortholog is 100%.
Bootstrap support for H3GB63 as seed ortholog is 100%.

Group of orthologs #67. Best score 718 bits
Score difference with first non-orthologous sequence - A.gossypii:718 P.ramorum:718

Q759E6              	100.00%		H3G5Z2              	100.00%
Bootstrap support for Q759E6 as seed ortholog is 100%.
Bootstrap support for H3G5Z2 as seed ortholog is 100%.

Group of orthologs #68. Best score 715 bits
Score difference with first non-orthologous sequence - A.gossypii:715 P.ramorum:715

Q9UVJ8              	100.00%		H3GB02              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for H3GB02 as seed ortholog is 100%.

Group of orthologs #69. Best score 714 bits
Score difference with first non-orthologous sequence - A.gossypii:355 P.ramorum:264

Q754Q9              	100.00%		H3G7B9              	100.00%
Bootstrap support for Q754Q9 as seed ortholog is 100%.
Bootstrap support for H3G7B9 as seed ortholog is 100%.

Group of orthologs #70. Best score 714 bits
Score difference with first non-orthologous sequence - A.gossypii:714 P.ramorum:714

Q75BD2              	100.00%		H3G8E5              	100.00%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for H3G8E5 as seed ortholog is 100%.

Group of orthologs #71. Best score 711 bits
Score difference with first non-orthologous sequence - A.gossypii:35 P.ramorum:711

Q750I7              	100.00%		H3G875              	100.00%
Bootstrap support for Q750I7 as seed ortholog is 78%.
Bootstrap support for H3G875 as seed ortholog is 100%.

Group of orthologs #72. Best score 704 bits
Score difference with first non-orthologous sequence - A.gossypii:704 P.ramorum:280

Q75CI1              	100.00%		H3G9R0              	100.00%
Bootstrap support for Q75CI1 as seed ortholog is 100%.
Bootstrap support for H3G9R0 as seed ortholog is 100%.

Group of orthologs #73. Best score 701 bits
Score difference with first non-orthologous sequence - A.gossypii:701 P.ramorum:701

Q755E1              	100.00%		H3G6X8              	100.00%
Bootstrap support for Q755E1 as seed ortholog is 100%.
Bootstrap support for H3G6X8 as seed ortholog is 100%.

Group of orthologs #74. Best score 698 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.ramorum:698

Q755Z2              	100.00%		H3G6X2              	100.00%
Q752L2              	19.66%		
Bootstrap support for Q755Z2 as seed ortholog is 100%.
Bootstrap support for H3G6X2 as seed ortholog is 100%.

Group of orthologs #75. Best score 698 bits
Score difference with first non-orthologous sequence - A.gossypii:698 P.ramorum:698

Q75BE4              	100.00%		H3GAT6              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for H3GAT6 as seed ortholog is 100%.

Group of orthologs #76. Best score 692 bits
Score difference with first non-orthologous sequence - A.gossypii:692 P.ramorum:692

Q75D54              	100.00%		H3G9K5              	100.00%
Bootstrap support for Q75D54 as seed ortholog is 100%.
Bootstrap support for H3G9K5 as seed ortholog is 100%.

Group of orthologs #77. Best score 691 bits
Score difference with first non-orthologous sequence - A.gossypii:439 P.ramorum:393

P41752              	100.00%		H3G8M4              	100.00%
                    	       		H3G8L8              	99.01%
Bootstrap support for P41752 as seed ortholog is 100%.
Bootstrap support for H3G8M4 as seed ortholog is 100%.

Group of orthologs #78. Best score 688 bits
Score difference with first non-orthologous sequence - A.gossypii:688 P.ramorum:688

Q75CN6              	100.00%		H3G777              	100.00%
                    	       		H3GB83              	71.91%
                    	       		H3H908              	49.66%
Bootstrap support for Q75CN6 as seed ortholog is 100%.
Bootstrap support for H3G777 as seed ortholog is 100%.

Group of orthologs #79. Best score 688 bits
Score difference with first non-orthologous sequence - A.gossypii:688 P.ramorum:688

Q75C45              	100.00%		H3G9B0              	100.00%
Bootstrap support for Q75C45 as seed ortholog is 100%.
Bootstrap support for H3G9B0 as seed ortholog is 100%.

Group of orthologs #80. Best score 688 bits
Score difference with first non-orthologous sequence - A.gossypii:449 P.ramorum:420

Q75BP6              	100.00%		H3GAD7              	100.00%
Bootstrap support for Q75BP6 as seed ortholog is 100%.
Bootstrap support for H3GAD7 as seed ortholog is 100%.

Group of orthologs #81. Best score 680 bits
Score difference with first non-orthologous sequence - A.gossypii:561 P.ramorum:41

Q753G0              	100.00%		H3G6R8              	100.00%
Bootstrap support for Q753G0 as seed ortholog is 100%.
Bootstrap support for H3G6R8 as seed ortholog is 57%.
Alternative seed ortholog is H3GQ49 (41 bits away from this cluster)

Group of orthologs #82. Best score 678 bits
Score difference with first non-orthologous sequence - A.gossypii:678 P.ramorum:678

Q759A4              	100.00%		H3G6Q2              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 100%.
Bootstrap support for H3G6Q2 as seed ortholog is 100%.

Group of orthologs #83. Best score 676 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:284

Q753V3              	100.00%		H3G5V7              	100.00%
Bootstrap support for Q753V3 as seed ortholog is 99%.
Bootstrap support for H3G5V7 as seed ortholog is 99%.

Group of orthologs #84. Best score 669 bits
Score difference with first non-orthologous sequence - A.gossypii:669 P.ramorum:669

Q752T2              	100.00%		H3GBZ6              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for H3GBZ6 as seed ortholog is 100%.

Group of orthologs #85. Best score 667 bits
Score difference with first non-orthologous sequence - A.gossypii:667 P.ramorum:667

Q753A6              	100.00%		H3G9K3              	100.00%
Bootstrap support for Q753A6 as seed ortholog is 100%.
Bootstrap support for H3G9K3 as seed ortholog is 100%.

Group of orthologs #86. Best score 663 bits
Score difference with first non-orthologous sequence - A.gossypii:663 P.ramorum:391

Q753Z4              	100.00%		H3GAJ9              	100.00%
Bootstrap support for Q753Z4 as seed ortholog is 100%.
Bootstrap support for H3GAJ9 as seed ortholog is 100%.

Group of orthologs #87. Best score 662 bits
Score difference with first non-orthologous sequence - A.gossypii:662 P.ramorum:518

Q755X4              	100.00%		H3H0Y2              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 100%.
Bootstrap support for H3H0Y2 as seed ortholog is 100%.

Group of orthologs #88. Best score 659 bits
Score difference with first non-orthologous sequence - A.gossypii:659 P.ramorum:659

Q751L7              	100.00%		H3G978              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for H3G978 as seed ortholog is 100%.

Group of orthologs #89. Best score 658 bits
Score difference with first non-orthologous sequence - A.gossypii:658 P.ramorum:658

Q74Z89              	100.00%		H3GB16              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 100%.
Bootstrap support for H3GB16 as seed ortholog is 100%.

Group of orthologs #90. Best score 657 bits
Score difference with first non-orthologous sequence - A.gossypii:447 P.ramorum:195

Q752Y2              	100.00%		H3G7E9              	100.00%
                    	       		H3G9Y4              	100.00%
                    	       		H3G9X9              	78.08%
                    	       		H3G7E7              	77.24%
                    	       		H3G9Y0              	72.31%
                    	       		H3GAV8              	61.79%
Bootstrap support for Q752Y2 as seed ortholog is 100%.
Bootstrap support for H3G7E9 as seed ortholog is 100%.
Bootstrap support for H3G9Y4 as seed ortholog is 100%.

Group of orthologs #91. Best score 657 bits
Score difference with first non-orthologous sequence - A.gossypii:657 P.ramorum:362

Q75AE3              	100.00%		H3GGH5              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 100%.
Bootstrap support for H3GGH5 as seed ortholog is 100%.

Group of orthologs #92. Best score 655 bits
Score difference with first non-orthologous sequence - A.gossypii:655 P.ramorum:394

Q75A77              	100.00%		H3G6K6              	100.00%
Bootstrap support for Q75A77 as seed ortholog is 100%.
Bootstrap support for H3G6K6 as seed ortholog is 100%.

Group of orthologs #93. Best score 653 bits
Score difference with first non-orthologous sequence - A.gossypii:255 P.ramorum:241

Q75D00              	100.00%		H3G9B9              	100.00%
                    	       		H3G9B8              	39.45%
Bootstrap support for Q75D00 as seed ortholog is 100%.
Bootstrap support for H3G9B9 as seed ortholog is 100%.

Group of orthologs #94. Best score 653 bits
Score difference with first non-orthologous sequence - A.gossypii:457 P.ramorum:296

Q754P1              	100.00%		H3G6U9              	100.00%
Bootstrap support for Q754P1 as seed ortholog is 100%.
Bootstrap support for H3G6U9 as seed ortholog is 99%.

Group of orthologs #95. Best score 653 bits
Score difference with first non-orthologous sequence - A.gossypii:653 P.ramorum:653

Q755V3              	100.00%		H3G897              	100.00%
Bootstrap support for Q755V3 as seed ortholog is 100%.
Bootstrap support for H3G897 as seed ortholog is 100%.

Group of orthologs #96. Best score 651 bits
Score difference with first non-orthologous sequence - A.gossypii:651 P.ramorum:651

Q751B1              	100.00%		H3G982              	100.00%
Bootstrap support for Q751B1 as seed ortholog is 100%.
Bootstrap support for H3G982 as seed ortholog is 100%.

Group of orthologs #97. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:519 P.ramorum:649

Q758M7              	100.00%		H3G930              	100.00%
Bootstrap support for Q758M7 as seed ortholog is 100%.
Bootstrap support for H3G930 as seed ortholog is 100%.

Group of orthologs #98. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:649 P.ramorum:649

Q75CF3              	100.00%		H3G5U5              	100.00%
Bootstrap support for Q75CF3 as seed ortholog is 100%.
Bootstrap support for H3G5U5 as seed ortholog is 100%.

Group of orthologs #99. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:648 P.ramorum:648

Q75DQ8              	100.00%		H3GLF9              	100.00%
Q75EQ4              	6.41%		
Bootstrap support for Q75DQ8 as seed ortholog is 100%.
Bootstrap support for H3GLF9 as seed ortholog is 100%.

Group of orthologs #100. Best score 647 bits
Score difference with first non-orthologous sequence - A.gossypii:444 P.ramorum:647

Q75D18              	100.00%		H3H6L0              	100.00%
                    	       		H3G744              	34.94%
Bootstrap support for Q75D18 as seed ortholog is 100%.
Bootstrap support for H3H6L0 as seed ortholog is 100%.

Group of orthologs #101. Best score 646 bits
Score difference with first non-orthologous sequence - A.gossypii:646 P.ramorum:646

Q754B5              	100.00%		H3G9C4              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for H3G9C4 as seed ortholog is 100%.

Group of orthologs #102. Best score 639 bits
Score difference with first non-orthologous sequence - A.gossypii:639 P.ramorum:369

Q752M8              	100.00%		H3G6I6              	100.00%
Bootstrap support for Q752M8 as seed ortholog is 100%.
Bootstrap support for H3G6I6 as seed ortholog is 100%.

Group of orthologs #103. Best score 636 bits
Score difference with first non-orthologous sequence - A.gossypii:450 P.ramorum:235

Q74Z73              	100.00%		H3G649              	100.00%
Bootstrap support for Q74Z73 as seed ortholog is 100%.
Bootstrap support for H3G649 as seed ortholog is 100%.

Group of orthologs #104. Best score 636 bits
Score difference with first non-orthologous sequence - A.gossypii:636 P.ramorum:368

Q753F9              	100.00%		H3GAS2              	100.00%
Bootstrap support for Q753F9 as seed ortholog is 100%.
Bootstrap support for H3GAS2 as seed ortholog is 100%.

Group of orthologs #105. Best score 635 bits
Score difference with first non-orthologous sequence - A.gossypii:484 P.ramorum:427

Q757P3              	100.00%		H3GUH6              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for H3GUH6 as seed ortholog is 100%.

Group of orthologs #106. Best score 633 bits
Score difference with first non-orthologous sequence - A.gossypii:532 P.ramorum:633

Q758Q8              	100.00%		H3G9J1              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for H3G9J1 as seed ortholog is 100%.

Group of orthologs #107. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 P.ramorum:626

Q750R1              	100.00%		H3G8X0              	100.00%
Bootstrap support for Q750R1 as seed ortholog is 100%.
Bootstrap support for H3G8X0 as seed ortholog is 100%.

Group of orthologs #108. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 P.ramorum:626

Q754K5              	100.00%		H3G7T2              	100.00%
Bootstrap support for Q754K5 as seed ortholog is 100%.
Bootstrap support for H3G7T2 as seed ortholog is 100%.

Group of orthologs #109. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 P.ramorum:626

Q75EU2              	100.00%		H3G970              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for H3G970 as seed ortholog is 100%.

Group of orthologs #110. Best score 625 bits
Score difference with first non-orthologous sequence - A.gossypii:625 P.ramorum:187

Q758Q9              	100.00%		H3GHD9              	100.00%
Bootstrap support for Q758Q9 as seed ortholog is 100%.
Bootstrap support for H3GHD9 as seed ortholog is 99%.

Group of orthologs #111. Best score 620 bits
Score difference with first non-orthologous sequence - A.gossypii:620 P.ramorum:482

Q75C66              	100.00%		H3GLH3              	100.00%
Bootstrap support for Q75C66 as seed ortholog is 100%.
Bootstrap support for H3GLH3 as seed ortholog is 100%.

Group of orthologs #112. Best score 619 bits
Score difference with first non-orthologous sequence - A.gossypii:619 P.ramorum:329

Q753Y4              	100.00%		H3GCX9              	100.00%
Bootstrap support for Q753Y4 as seed ortholog is 100%.
Bootstrap support for H3GCX9 as seed ortholog is 100%.

Group of orthologs #113. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:616 P.ramorum:453

Q757M5              	100.00%		H3G8K6              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 100%.
Bootstrap support for H3G8K6 as seed ortholog is 100%.

Group of orthologs #114. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:35 P.ramorum:616

Q75F90              	100.00%		H3GAE1              	100.00%
Bootstrap support for Q75F90 as seed ortholog is 74%.
Alternative seed ortholog is Q75DL8 (35 bits away from this cluster)
Bootstrap support for H3GAE1 as seed ortholog is 100%.

Group of orthologs #115. Best score 611 bits
Score difference with first non-orthologous sequence - A.gossypii:611 P.ramorum:611

Q75DY5              	100.00%		H3GTJ1              	100.00%
Bootstrap support for Q75DY5 as seed ortholog is 100%.
Bootstrap support for H3GTJ1 as seed ortholog is 100%.

Group of orthologs #116. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 P.ramorum:601

Q755G5              	100.00%		H3G952              	100.00%
Bootstrap support for Q755G5 as seed ortholog is 100%.
Bootstrap support for H3G952 as seed ortholog is 100%.

Group of orthologs #117. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:422 P.ramorum:267

Q755N4              	100.00%		H3G9I9              	100.00%
Bootstrap support for Q755N4 as seed ortholog is 100%.
Bootstrap support for H3G9I9 as seed ortholog is 100%.

Group of orthologs #118. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 P.ramorum:601

Q757H0              	100.00%		H3H4A7              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for H3H4A7 as seed ortholog is 100%.

Group of orthologs #119. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:598 P.ramorum:598

Q75CE3              	100.00%		H3G9K7              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for H3G9K7 as seed ortholog is 100%.

Group of orthologs #120. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:596 P.ramorum:514

Q75D48              	100.00%		H3G8J5              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for H3G8J5 as seed ortholog is 100%.

Group of orthologs #121. Best score 596 bits
Score difference with first non-orthologous sequence - A.gossypii:596 P.ramorum:472

Q751F3              	100.00%		H3GV59              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 100%.
Bootstrap support for H3GV59 as seed ortholog is 100%.

Group of orthologs #122. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:594 P.ramorum:594

Q75D90              	100.00%		H3G747              	100.00%
                    	       		H3GNS5              	6.58%
Bootstrap support for Q75D90 as seed ortholog is 100%.
Bootstrap support for H3G747 as seed ortholog is 100%.

Group of orthologs #123. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:594 P.ramorum:327

Q74ZC3              	100.00%		H3G7X1              	100.00%
Bootstrap support for Q74ZC3 as seed ortholog is 100%.
Bootstrap support for H3G7X1 as seed ortholog is 100%.

Group of orthologs #124. Best score 590 bits
Score difference with first non-orthologous sequence - A.gossypii:590 P.ramorum:590

Q750R3              	100.00%		H3G985              	100.00%
Bootstrap support for Q750R3 as seed ortholog is 100%.
Bootstrap support for H3G985 as seed ortholog is 100%.

Group of orthologs #125. Best score 585 bits
Score difference with first non-orthologous sequence - A.gossypii:412 P.ramorum:400

Q75BS4              	100.00%		H3G996              	100.00%
Bootstrap support for Q75BS4 as seed ortholog is 100%.
Bootstrap support for H3G996 as seed ortholog is 100%.

Group of orthologs #126. Best score 583 bits
Score difference with first non-orthologous sequence - A.gossypii:583 P.ramorum:583

Q756B7              	100.00%		H3GA45              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for H3GA45 as seed ortholog is 100%.

Group of orthologs #127. Best score 582 bits
Score difference with first non-orthologous sequence - A.gossypii:582 P.ramorum:582

Q75FB3              	100.00%		H3HC97              	100.00%
Bootstrap support for Q75FB3 as seed ortholog is 100%.
Bootstrap support for H3HC97 as seed ortholog is 100%.

Group of orthologs #128. Best score 580 bits
Score difference with first non-orthologous sequence - A.gossypii:363 P.ramorum:122

Q750C0              	100.00%		H3G8G8              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 100%.
Bootstrap support for H3G8G8 as seed ortholog is 99%.

Group of orthologs #129. Best score 574 bits
Score difference with first non-orthologous sequence - A.gossypii:343 P.ramorum:438

Q753P8              	100.00%		H3G6S6              	100.00%
Bootstrap support for Q753P8 as seed ortholog is 100%.
Bootstrap support for H3G6S6 as seed ortholog is 100%.

Group of orthologs #130. Best score 573 bits
Score difference with first non-orthologous sequence - A.gossypii:573 P.ramorum:573

Q75A36              	100.00%		H3GA85              	100.00%
Bootstrap support for Q75A36 as seed ortholog is 100%.
Bootstrap support for H3GA85 as seed ortholog is 100%.

Group of orthologs #131. Best score 572 bits
Score difference with first non-orthologous sequence - A.gossypii:572 P.ramorum:301

Q74ZJ9              	100.00%		H3G5J3              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for H3G5J3 as seed ortholog is 100%.

Group of orthologs #132. Best score 568 bits
Score difference with first non-orthologous sequence - A.gossypii:568 P.ramorum:568

Q757N3              	100.00%		H3GKZ2              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for H3GKZ2 as seed ortholog is 100%.

Group of orthologs #133. Best score 567 bits
Score difference with first non-orthologous sequence - A.gossypii:372 P.ramorum:127

Q757G0              	100.00%		H3GU12              	100.00%
                    	       		H3H4C0              	14.11%
Bootstrap support for Q757G0 as seed ortholog is 100%.
Bootstrap support for H3GU12 as seed ortholog is 98%.

Group of orthologs #134. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 P.ramorum:374

Q752R1              	100.00%		H3GAL9              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for H3GAL9 as seed ortholog is 100%.

Group of orthologs #135. Best score 560 bits
Score difference with first non-orthologous sequence - A.gossypii:560 P.ramorum:276

Q750J1              	100.00%		H3GNJ5              	100.00%
Bootstrap support for Q750J1 as seed ortholog is 100%.
Bootstrap support for H3GNJ5 as seed ortholog is 100%.

Group of orthologs #136. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:419 P.ramorum:399

Q759L6              	100.00%		H3G9Z6              	100.00%
Bootstrap support for Q759L6 as seed ortholog is 100%.
Bootstrap support for H3G9Z6 as seed ortholog is 100%.

Group of orthologs #137. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 P.ramorum:557

Q75D10              	100.00%		H3GA72              	100.00%
Bootstrap support for Q75D10 as seed ortholog is 100%.
Bootstrap support for H3GA72 as seed ortholog is 100%.

Group of orthologs #138. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 P.ramorum:469

Q750Y5              	100.00%		H3H2A5              	100.00%
Bootstrap support for Q750Y5 as seed ortholog is 100%.
Bootstrap support for H3H2A5 as seed ortholog is 100%.

Group of orthologs #139. Best score 556 bits
Score difference with first non-orthologous sequence - A.gossypii:556 P.ramorum:556

Q751I0              	100.00%		H3GXS1              	100.00%
Bootstrap support for Q751I0 as seed ortholog is 100%.
Bootstrap support for H3GXS1 as seed ortholog is 100%.

Group of orthologs #140. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:247 P.ramorum:278

Q754T2              	100.00%		H3GQ90              	100.00%
                    	       		H3GRQ9              	58.36%
                    	       		H3G822              	15.95%
                    	       		H3G5Z1              	6.58%
Bootstrap support for Q754T2 as seed ortholog is 99%.
Bootstrap support for H3GQ90 as seed ortholog is 99%.

Group of orthologs #141. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 P.ramorum:111

Q75BQ6              	100.00%		H3G967              	100.00%
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for H3G967 as seed ortholog is 99%.

Group of orthologs #142. Best score 553 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:78

Q759C3              	100.00%		H3GWW2              	100.00%
                    	       		H3GED2              	33.54%
                    	       		H3GLV4              	10.80%
                    	       		H3H2D8              	10.38%
                    	       		H3HBR1              	10.12%
                    	       		H3H128              	7.77%
                    	       		H3GVD7              	7.41%
                    	       		H3GJS3              	6.78%
Bootstrap support for Q759C3 as seed ortholog is 97%.
Bootstrap support for H3GWW2 as seed ortholog is 87%.

Group of orthologs #143. Best score 553 bits
Score difference with first non-orthologous sequence - A.gossypii:553 P.ramorum:553

Q758Z0              	100.00%		H3G8B1              	100.00%
Bootstrap support for Q758Z0 as seed ortholog is 100%.
Bootstrap support for H3G8B1 as seed ortholog is 100%.

Group of orthologs #144. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:551 P.ramorum:551

Q74ZK6              	100.00%		H3G9G8              	100.00%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for H3G9G8 as seed ortholog is 100%.

Group of orthologs #145. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.ramorum:123

Q754A6              	100.00%		H3GAS5              	100.00%
Bootstrap support for Q754A6 as seed ortholog is 100%.
Bootstrap support for H3GAS5 as seed ortholog is 100%.

Group of orthologs #146. Best score 550 bits
Score difference with first non-orthologous sequence - A.gossypii:550 P.ramorum:550

Q75DB4              	100.00%		H3GUY1              	100.00%
Bootstrap support for Q75DB4 as seed ortholog is 100%.
Bootstrap support for H3GUY1 as seed ortholog is 100%.

Group of orthologs #147. Best score 548 bits
Score difference with first non-orthologous sequence - A.gossypii:548 P.ramorum:548

Q759R7              	100.00%		H3G9A1              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for H3G9A1 as seed ortholog is 100%.

Group of orthologs #148. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:379 P.ramorum:277

Q75B50              	100.00%		H3G780              	100.00%
Bootstrap support for Q75B50 as seed ortholog is 100%.
Bootstrap support for H3G780 as seed ortholog is 100%.

Group of orthologs #149. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:440 P.ramorum:409

Q75ED8              	100.00%		H3G8R2              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for H3G8R2 as seed ortholog is 100%.

Group of orthologs #150. Best score 545 bits
Score difference with first non-orthologous sequence - A.gossypii:545 P.ramorum:385

Q756K0              	100.00%		H3G8D8              	100.00%
Bootstrap support for Q756K0 as seed ortholog is 100%.
Bootstrap support for H3G8D8 as seed ortholog is 100%.

Group of orthologs #151. Best score 543 bits
Score difference with first non-orthologous sequence - A.gossypii:543 P.ramorum:543

Q757I5              	100.00%		H3G9F4              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for H3G9F4 as seed ortholog is 100%.

Group of orthologs #152. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:542 P.ramorum:162

Q751N2              	100.00%		H3GAS7              	100.00%
Bootstrap support for Q751N2 as seed ortholog is 100%.
Bootstrap support for H3GAS7 as seed ortholog is 99%.

Group of orthologs #153. Best score 541 bits
Score difference with first non-orthologous sequence - A.gossypii:541 P.ramorum:541

Q757F2              	100.00%		H3G9I7              	100.00%
Q75ET8              	15.46%		H3GA90              	8.12%
Bootstrap support for Q757F2 as seed ortholog is 100%.
Bootstrap support for H3G9I7 as seed ortholog is 100%.

Group of orthologs #154. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 P.ramorum:539

Q75DC5              	100.00%		H3G5N2              	100.00%
Bootstrap support for Q75DC5 as seed ortholog is 100%.
Bootstrap support for H3G5N2 as seed ortholog is 100%.

Group of orthologs #155. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:537 P.ramorum:356

Q75F41              	100.00%		H3HAM1              	100.00%
Bootstrap support for Q75F41 as seed ortholog is 100%.
Bootstrap support for H3HAM1 as seed ortholog is 100%.

Group of orthologs #156. Best score 536 bits
Score difference with first non-orthologous sequence - A.gossypii:536 P.ramorum:335

O60028              	100.00%		H3G6I7              	100.00%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for H3G6I7 as seed ortholog is 100%.

Group of orthologs #157. Best score 536 bits
Score difference with first non-orthologous sequence - A.gossypii:309 P.ramorum:536

Q752H7              	100.00%		H3G9A5              	100.00%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for H3G9A5 as seed ortholog is 100%.

Group of orthologs #158. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 P.ramorum:381

Q753C2              	100.00%		H3HD78              	100.00%
Bootstrap support for Q753C2 as seed ortholog is 100%.
Bootstrap support for H3HD78 as seed ortholog is 100%.

Group of orthologs #159. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 P.ramorum:292

Q75BD7              	100.00%		H3G8E4              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for H3G8E4 as seed ortholog is 100%.

Group of orthologs #160. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 P.ramorum:534

Q755Y6              	100.00%		H3GEL6              	100.00%
Bootstrap support for Q755Y6 as seed ortholog is 100%.
Bootstrap support for H3GEL6 as seed ortholog is 100%.

Group of orthologs #161. Best score 533 bits
Score difference with first non-orthologous sequence - A.gossypii:533 P.ramorum:533

Q753K9              	100.00%		H3GA05              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 100%.
Bootstrap support for H3GA05 as seed ortholog is 100%.

Group of orthologs #162. Best score 531 bits
Score difference with first non-orthologous sequence - A.gossypii:531 P.ramorum:241

Q75BK3              	100.00%		H3G8X1              	100.00%
Bootstrap support for Q75BK3 as seed ortholog is 100%.
Bootstrap support for H3G8X1 as seed ortholog is 100%.

Group of orthologs #163. Best score 530 bits
Score difference with first non-orthologous sequence - A.gossypii:530 P.ramorum:530

Q75D85              	100.00%		H3HDS6              	100.00%
Bootstrap support for Q75D85 as seed ortholog is 100%.
Bootstrap support for H3HDS6 as seed ortholog is 100%.

Group of orthologs #164. Best score 528 bits
Score difference with first non-orthologous sequence - A.gossypii:528 P.ramorum:196

Q75D98              	100.00%		H3H6M5              	100.00%
Q75D99              	100.00%		H3GD45              	100.00%
Q750T1              	69.78%		H3GD44              	92.49%
                    	       		H3GS99              	69.77%
                    	       		H3GSA1              	66.52%
                    	       		H3GL25              	63.67%
                    	       		H3GNF8              	63.00%
                    	       		H3GNG1              	59.93%
                    	       		H3H0T2              	59.30%
                    	       		H3GNG4              	58.98%
                    	       		H3GNG3              	58.71%
                    	       		H3GNG6              	56.95%
                    	       		H3GLW5              	56.72%
                    	       		H3H0T1              	56.00%
                    	       		H3H2W8              	55.91%
                    	       		H3GNG2              	55.55%
                    	       		H3H672              	55.23%
                    	       		H3GR90              	54.92%
                    	       		H3H5U7              	54.69%
                    	       		H3H1B8              	53.97%
                    	       		H3GLZ4              	53.29%
                    	       		H3H6S7              	51.71%
                    	       		H3GXR5              	50.77%
                    	       		H3GDX6              	48.24%
                    	       		H3H1R1              	48.01%
                    	       		H3GLT8              	46.89%
                    	       		H3GXR3              	46.75%
                    	       		H3GQ62              	45.62%
                    	       		H3GU09              	44.54%
                    	       		H3H0T0              	43.50%
                    	       		H3GSR4              	42.82%
                    	       		H3GK62              	41.65%
                    	       		H3GK63              	40.57%
                    	       		H3H2P6              	39.62%
                    	       		H3GK60              	39.53%
                    	       		H3GFN6              	38.18%
                    	       		H3H1B4              	28.97%
                    	       		H3GXY8              	28.40%
                    	       		H3GP04              	27.93%
                    	       		H3H939              	24.64%
                    	       		H3GXU4              	23.67%
                    	       		H3H675              	22.97%
                    	       		H3GNG5              	20.54%
                    	       		H3H801              	19.31%
                    	       		H3H671              	17.96%
                    	       		H3H5M8              	14.71%
                    	       		H3H747              	12.06%
                    	       		H3GUB1              	11.79%
                    	       		H3H0G1              	11.79%
                    	       		H3H1N3              	11.66%
                    	       		H3H0F9              	11.62%
                    	       		H3H1N1              	11.57%
                    	       		H3H1M7              	11.53%
                    	       		H3H1N6              	11.40%
                    	       		H3H1N0              	11.22%
                    	       		H3H0R6              	9.03%
                    	       		H3H8K6              	7.58%
                    	       		H3H8H5              	7.51%
Bootstrap support for Q75D98 as seed ortholog is 100%.
Bootstrap support for Q75D99 as seed ortholog is 100%.
Bootstrap support for H3H6M5 as seed ortholog is 99%.
Bootstrap support for H3GD45 as seed ortholog is 99%.

Group of orthologs #165. Best score 528 bits
Score difference with first non-orthologous sequence - A.gossypii:528 P.ramorum:528

Q756A7              	100.00%		H3GEH1              	100.00%
Bootstrap support for Q756A7 as seed ortholog is 100%.
Bootstrap support for H3GEH1 as seed ortholog is 100%.

Group of orthologs #166. Best score 525 bits
Score difference with first non-orthologous sequence - A.gossypii:525 P.ramorum:392

Q74ZG2              	100.00%		H3G5E1              	100.00%
Bootstrap support for Q74ZG2 as seed ortholog is 100%.
Bootstrap support for H3G5E1 as seed ortholog is 100%.

Group of orthologs #167. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 P.ramorum:520

Q754W3              	100.00%		H3G8H1              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for H3G8H1 as seed ortholog is 100%.

Group of orthologs #168. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 P.ramorum:520

Q75DM3              	100.00%		H3G8H8              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for H3G8H8 as seed ortholog is 100%.

Group of orthologs #169. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:315 P.ramorum:343

Q75BB2              	100.00%		H3G8T0              	100.00%
Bootstrap support for Q75BB2 as seed ortholog is 100%.
Bootstrap support for H3G8T0 as seed ortholog is 100%.

Group of orthologs #170. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:1

Q74Z12              	100.00%		H3G8C8              	100.00%
                    	       		H3GAP9              	53.69%
Bootstrap support for Q74Z12 as seed ortholog is 95%.
Bootstrap support for H3G8C8 as seed ortholog is 49%.
Alternative seed ortholog is H3G8M9 (1 bits away from this cluster)

Group of orthologs #171. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:515 P.ramorum:515

Q75BR1              	100.00%		H3G5G0              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for H3G5G0 as seed ortholog is 100%.

Group of orthologs #172. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:152 P.ramorum:515

Q75ES5              	100.00%		H3G951              	100.00%
Bootstrap support for Q75ES5 as seed ortholog is 99%.
Bootstrap support for H3G951 as seed ortholog is 100%.

Group of orthologs #173. Best score 513 bits
Score difference with first non-orthologous sequence - A.gossypii:513 P.ramorum:513

Q753V9              	100.00%		H3G863              	100.00%
Bootstrap support for Q753V9 as seed ortholog is 100%.
Bootstrap support for H3G863 as seed ortholog is 100%.

Group of orthologs #174. Best score 513 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.ramorum:275

Q757S7              	100.00%		H3HD47              	100.00%
Bootstrap support for Q757S7 as seed ortholog is 99%.
Bootstrap support for H3HD47 as seed ortholog is 99%.

Group of orthologs #175. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:512 P.ramorum:512

Q753S1              	100.00%		H3GAI9              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for H3GAI9 as seed ortholog is 100%.

Group of orthologs #176. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:322 P.ramorum:317

Q75BL8              	100.00%		H3G926              	100.00%
Bootstrap support for Q75BL8 as seed ortholog is 100%.
Bootstrap support for H3G926 as seed ortholog is 100%.

Group of orthologs #177. Best score 511 bits
Score difference with first non-orthologous sequence - A.gossypii:266 P.ramorum:252

Q750N5              	100.00%		H3G5C6              	100.00%
                    	       		H3GHU6              	45.84%
Bootstrap support for Q750N5 as seed ortholog is 99%.
Bootstrap support for H3G5C6 as seed ortholog is 100%.

Group of orthologs #178. Best score 511 bits
Score difference with first non-orthologous sequence - A.gossypii:511 P.ramorum:392

Q756H2              	100.00%		H3GAG9              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for H3GAG9 as seed ortholog is 100%.

Group of orthologs #179. Best score 510 bits
Score difference with first non-orthologous sequence - A.gossypii:510 P.ramorum:157

Q757Q0              	100.00%		H3GAQ8              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for H3GAQ8 as seed ortholog is 100%.

Group of orthologs #180. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:508 P.ramorum:508

Q757X5              	100.00%		H3G6I4              	100.00%
                    	       		H3H5Y3              	37.59%
Bootstrap support for Q757X5 as seed ortholog is 100%.
Bootstrap support for H3G6I4 as seed ortholog is 100%.

Group of orthologs #181. Best score 507 bits
Score difference with first non-orthologous sequence - A.gossypii:507 P.ramorum:507

Q757M8              	100.00%		H3GTV1              	100.00%
Bootstrap support for Q757M8 as seed ortholog is 100%.
Bootstrap support for H3GTV1 as seed ortholog is 100%.

Group of orthologs #182. Best score 505 bits
Score difference with first non-orthologous sequence - A.gossypii:452 P.ramorum:209

Q75E20              	100.00%		H3HDI7              	100.00%
                    	       		H3G8F1              	14.08%
Bootstrap support for Q75E20 as seed ortholog is 100%.
Bootstrap support for H3HDI7 as seed ortholog is 100%.

Group of orthologs #183. Best score 505 bits
Score difference with first non-orthologous sequence - A.gossypii:505 P.ramorum:505

Q74ZC0              	100.00%		H3G835              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for H3G835 as seed ortholog is 100%.

Group of orthologs #184. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 P.ramorum:124

Q753U3              	100.00%		H3GA43              	100.00%
Bootstrap support for Q753U3 as seed ortholog is 100%.
Bootstrap support for H3GA43 as seed ortholog is 99%.

Group of orthologs #185. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 P.ramorum:179

Q757E8              	100.00%		H3G7P5              	100.00%
Bootstrap support for Q757E8 as seed ortholog is 100%.
Bootstrap support for H3G7P5 as seed ortholog is 99%.

Group of orthologs #186. Best score 499 bits
Score difference with first non-orthologous sequence - A.gossypii:499 P.ramorum:499

Q756T4              	100.00%		H3H0Z5              	100.00%
Bootstrap support for Q756T4 as seed ortholog is 100%.
Bootstrap support for H3H0Z5 as seed ortholog is 100%.

Group of orthologs #187. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:498

O94198              	100.00%		H3G9N7              	100.00%
Bootstrap support for O94198 as seed ortholog is 99%.
Bootstrap support for H3G9N7 as seed ortholog is 100%.

Group of orthologs #188. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:498 P.ramorum:219

Q75BE2              	100.00%		H3G924              	100.00%
Bootstrap support for Q75BE2 as seed ortholog is 100%.
Bootstrap support for H3G924 as seed ortholog is 99%.

Group of orthologs #189. Best score 497 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:134

Q75CG3              	100.00%		H3G5S9              	100.00%
Q758W1              	27.59%		H3G8I6              	100.00%
                    	       		H3G8I3              	73.29%
                    	       		H3G8I2              	64.39%
                    	       		H3H3Z3              	53.19%
Bootstrap support for Q75CG3 as seed ortholog is 99%.
Bootstrap support for H3G5S9 as seed ortholog is 99%.
Bootstrap support for H3G8I6 as seed ortholog is 99%.

Group of orthologs #190. Best score 497 bits
Score difference with first non-orthologous sequence - A.gossypii:497 P.ramorum:497

Q75BQ2              	100.00%		H3G852              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for H3G852 as seed ortholog is 100%.

Group of orthologs #191. Best score 496 bits
Score difference with first non-orthologous sequence - A.gossypii:318 P.ramorum:307

Q755W0              	100.00%		H3GA17              	100.00%
Bootstrap support for Q755W0 as seed ortholog is 100%.
Bootstrap support for H3GA17 as seed ortholog is 100%.

Group of orthologs #192. Best score 496 bits
Score difference with first non-orthologous sequence - A.gossypii:496 P.ramorum:496

Q75CS4              	100.00%		H3G5C8              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for H3G5C8 as seed ortholog is 100%.

Group of orthologs #193. Best score 494 bits
Score difference with first non-orthologous sequence - A.gossypii:494 P.ramorum:494

Q75AG4              	100.00%		H3GND3              	100.00%
Bootstrap support for Q75AG4 as seed ortholog is 100%.
Bootstrap support for H3GND3 as seed ortholog is 100%.

Group of orthologs #194. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.ramorum:385

Q74ZT2              	100.00%		H3G5M3              	100.00%
Bootstrap support for Q74ZT2 as seed ortholog is 99%.
Bootstrap support for H3G5M3 as seed ortholog is 100%.

Group of orthologs #195. Best score 491 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.ramorum:34

Q75A21              	100.00%		H3G8L9              	100.00%
Bootstrap support for Q75A21 as seed ortholog is 100%.
Bootstrap support for H3G8L9 as seed ortholog is 86%.

Group of orthologs #196. Best score 491 bits
Score difference with first non-orthologous sequence - A.gossypii:491 P.ramorum:115

Q752D6              	100.00%		H3H2X5              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for H3H2X5 as seed ortholog is 93%.

Group of orthologs #197. Best score 489 bits
Score difference with first non-orthologous sequence - A.gossypii:489 P.ramorum:489

Q75CR3              	100.00%		H3G5Z0              	100.00%
Bootstrap support for Q75CR3 as seed ortholog is 100%.
Bootstrap support for H3G5Z0 as seed ortholog is 100%.

Group of orthologs #198. Best score 487 bits
Score difference with first non-orthologous sequence - A.gossypii:487 P.ramorum:487

Q751Y3              	100.00%		H3GA19              	100.00%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for H3GA19 as seed ortholog is 100%.

Group of orthologs #199. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 P.ramorum:485

Q753N9              	100.00%		H3GVH6              	100.00%
Bootstrap support for Q753N9 as seed ortholog is 100%.
Bootstrap support for H3GVH6 as seed ortholog is 100%.

Group of orthologs #200. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 P.ramorum:485

Q759T9              	100.00%		H3GVT4              	100.00%
Bootstrap support for Q759T9 as seed ortholog is 100%.
Bootstrap support for H3GVT4 as seed ortholog is 100%.

Group of orthologs #201. Best score 482 bits
Score difference with first non-orthologous sequence - A.gossypii:482 P.ramorum:482

Q753T3              	100.00%		H3G8U2              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for H3G8U2 as seed ortholog is 100%.

Group of orthologs #202. Best score 481 bits
Score difference with first non-orthologous sequence - A.gossypii:207 P.ramorum:205

Q759G0              	100.00%		H3G9P8              	100.00%
Bootstrap support for Q759G0 as seed ortholog is 100%.
Bootstrap support for H3G9P8 as seed ortholog is 100%.

Group of orthologs #203. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 P.ramorum:480

Q75CD0              	100.00%		H3G764              	100.00%
                    	       		H3G9R8              	80.54%
Bootstrap support for Q75CD0 as seed ortholog is 100%.
Bootstrap support for H3G764 as seed ortholog is 100%.

Group of orthologs #204. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 P.ramorum:3

Q74ZS5              	100.00%		H3GTE0              	100.00%
                    	       		H3GEV6              	7.21%
Bootstrap support for Q74ZS5 as seed ortholog is 100%.
Bootstrap support for H3GTE0 as seed ortholog is 67%.
Alternative seed ortholog is H3HCY4 (3 bits away from this cluster)

Group of orthologs #205. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 P.ramorum:480

Q751N1              	100.00%		H3G9Y9              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for H3G9Y9 as seed ortholog is 100%.

Group of orthologs #206. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 P.ramorum:244

Q75C76              	100.00%		H3HAQ3              	100.00%
Bootstrap support for Q75C76 as seed ortholog is 100%.
Bootstrap support for H3HAQ3 as seed ortholog is 100%.

Group of orthologs #207. Best score 479 bits
Score difference with first non-orthologous sequence - A.gossypii:479 P.ramorum:479

Q75B31              	100.00%		H3GR02              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for H3GR02 as seed ortholog is 100%.

Group of orthologs #208. Best score 476 bits
Score difference with first non-orthologous sequence - A.gossypii:476 P.ramorum:476

Q750T6              	100.00%		H3GRC1              	100.00%
Bootstrap support for Q750T6 as seed ortholog is 100%.
Bootstrap support for H3GRC1 as seed ortholog is 100%.

Group of orthologs #209. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 P.ramorum:310

Q750J4              	100.00%		H3G4Y1              	100.00%
Bootstrap support for Q750J4 as seed ortholog is 100%.
Bootstrap support for H3G4Y1 as seed ortholog is 100%.

Group of orthologs #210. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:472

Q75F55              	100.00%		H3GS01              	100.00%
                    	       		H3GTN8              	37.17%
Bootstrap support for Q75F55 as seed ortholog is 99%.
Bootstrap support for H3GS01 as seed ortholog is 100%.

Group of orthologs #211. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.ramorum:471

Q75EA7              	100.00%		H3GAC2              	100.00%
                    	       		H3G9J6              	7.91%
Bootstrap support for Q75EA7 as seed ortholog is 78%.
Bootstrap support for H3GAC2 as seed ortholog is 100%.

Group of orthologs #212. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:471 P.ramorum:471

Q752T8              	100.00%		H3G8V9              	100.00%
Bootstrap support for Q752T8 as seed ortholog is 100%.
Bootstrap support for H3G8V9 as seed ortholog is 100%.

Group of orthologs #213. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:237

Q758Q0              	100.00%		H3G4Y9              	100.00%
Bootstrap support for Q758Q0 as seed ortholog is 93%.
Bootstrap support for H3G4Y9 as seed ortholog is 100%.

Group of orthologs #214. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:347 P.ramorum:384

Q75AF7              	100.00%		H3G8K3              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 100%.
Bootstrap support for H3G8K3 as seed ortholog is 100%.

Group of orthologs #215. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 P.ramorum:468

Q75DF8              	100.00%		H3G9S8              	100.00%
Bootstrap support for Q75DF8 as seed ortholog is 100%.
Bootstrap support for H3G9S8 as seed ortholog is 100%.

Group of orthologs #216. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 P.ramorum:468

Q75DP6              	100.00%		H3HD79              	100.00%
Bootstrap support for Q75DP6 as seed ortholog is 100%.
Bootstrap support for H3HD79 as seed ortholog is 100%.

Group of orthologs #217. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 P.ramorum:467

Q757L9              	100.00%		H3G8W5              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for H3G8W5 as seed ortholog is 100%.

Group of orthologs #218. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 P.ramorum:216

Q75EA4              	100.00%		H3GCT4              	100.00%
Bootstrap support for Q75EA4 as seed ortholog is 100%.
Bootstrap support for H3GCT4 as seed ortholog is 99%.

Group of orthologs #219. Best score 464 bits
Score difference with first non-orthologous sequence - A.gossypii:464 P.ramorum:464

Q751B3              	100.00%		H3G7Y5              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for H3G7Y5 as seed ortholog is 100%.

Group of orthologs #220. Best score 464 bits
Score difference with first non-orthologous sequence - A.gossypii:464 P.ramorum:464

Q751U1              	100.00%		H3GC19              	100.00%
Bootstrap support for Q751U1 as seed ortholog is 100%.
Bootstrap support for H3GC19 as seed ortholog is 100%.

Group of orthologs #221. Best score 464 bits
Score difference with first non-orthologous sequence - A.gossypii:464 P.ramorum:349

Q753Y9              	100.00%		H3GAL0              	100.00%
Bootstrap support for Q753Y9 as seed ortholog is 100%.
Bootstrap support for H3GAL0 as seed ortholog is 100%.

Group of orthologs #222. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:462 P.ramorum:462

Q75C71              	100.00%		H3G986              	100.00%
Bootstrap support for Q75C71 as seed ortholog is 100%.
Bootstrap support for H3G986 as seed ortholog is 100%.

Group of orthologs #223. Best score 461 bits
Score difference with first non-orthologous sequence - A.gossypii:461 P.ramorum:461

Q753M0              	100.00%		H3G8U5              	100.00%
                    	       		H3G9G9              	46.95%
                    	       		H3G9H0              	46.78%
Bootstrap support for Q753M0 as seed ortholog is 100%.
Bootstrap support for H3G8U5 as seed ortholog is 100%.

Group of orthologs #224. Best score 461 bits
Score difference with first non-orthologous sequence - A.gossypii:461 P.ramorum:461

Q753L7              	100.00%		H3GG74              	100.00%
Bootstrap support for Q753L7 as seed ortholog is 100%.
Bootstrap support for H3GG74 as seed ortholog is 100%.

Group of orthologs #225. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:121

Q75C31              	100.00%		H3GCI6              	100.00%
                    	       		H3G910              	34.24%
Bootstrap support for Q75C31 as seed ortholog is 83%.
Bootstrap support for H3GCI6 as seed ortholog is 92%.

Group of orthologs #226. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 P.ramorum:457

Q75BP7              	100.00%		H3HE68              	100.00%
Bootstrap support for Q75BP7 as seed ortholog is 100%.
Bootstrap support for H3HE68 as seed ortholog is 100%.

Group of orthologs #227. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 P.ramorum:455

Q75B86              	100.00%		H3GYM4              	100.00%
Bootstrap support for Q75B86 as seed ortholog is 100%.
Bootstrap support for H3GYM4 as seed ortholog is 100%.

Group of orthologs #228. Best score 454 bits
Score difference with first non-orthologous sequence - A.gossypii:227 P.ramorum:223

Q753A5              	100.00%		H3GAT7              	100.00%
Bootstrap support for Q753A5 as seed ortholog is 100%.
Bootstrap support for H3GAT7 as seed ortholog is 100%.

Group of orthologs #229. Best score 453 bits
Score difference with first non-orthologous sequence - A.gossypii:453 P.ramorum:453

Q751G2              	100.00%		H3G9J5              	100.00%
                    	       		H3G9E1              	63.68%
                    	       		H3G6P1              	44.94%
Bootstrap support for Q751G2 as seed ortholog is 100%.
Bootstrap support for H3G9J5 as seed ortholog is 100%.

Group of orthologs #230. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:450 P.ramorum:450

Q75EM6              	100.00%		H3GJ71              	100.00%
Q75CX2              	100.00%		H3GXM9              	100.00%
Q751P2              	44.97%		H3GN43              	61.91%
                    	       		H3GLQ6              	21.18%
                    	       		H3GUE8              	17.32%
                    	       		H3GIY5              	11.28%
                    	       		H3GIY6              	11.25%
Bootstrap support for Q75EM6 as seed ortholog is 100%.
Bootstrap support for Q75CX2 as seed ortholog is 100%.
Bootstrap support for H3GJ71 as seed ortholog is 100%.
Bootstrap support for H3GXM9 as seed ortholog is 100%.

Group of orthologs #231. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:450 P.ramorum:450

Q753X7              	100.00%		H3G7L0              	100.00%
Bootstrap support for Q753X7 as seed ortholog is 100%.
Bootstrap support for H3G7L0 as seed ortholog is 100%.

Group of orthologs #232. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:384 P.ramorum:9

Q75BN9              	100.00%		H3G7Z0              	100.00%
Bootstrap support for Q75BN9 as seed ortholog is 100%.
Bootstrap support for H3G7Z0 as seed ortholog is 56%.
Alternative seed ortholog is H3GVF8 (9 bits away from this cluster)

Group of orthologs #233. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:69

Q757B9              	100.00%		H3GEM0              	100.00%
Bootstrap support for Q757B9 as seed ortholog is 98%.
Bootstrap support for H3GEM0 as seed ortholog is 72%.
Alternative seed ortholog is H3GFK4 (69 bits away from this cluster)

Group of orthologs #234. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:449 P.ramorum:449

Q754E1              	100.00%		H3G9Q8              	100.00%
Bootstrap support for Q754E1 as seed ortholog is 100%.
Bootstrap support for H3G9Q8 as seed ortholog is 100%.

Group of orthologs #235. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:257

Q75DA4              	100.00%		H3G7L4              	100.00%
Bootstrap support for Q75DA4 as seed ortholog is 100%.
Bootstrap support for H3G7L4 as seed ortholog is 100%.

Group of orthologs #236. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:449 P.ramorum:80

Q757P4              	100.00%		H3H1Y7              	100.00%
Bootstrap support for Q757P4 as seed ortholog is 100%.
Bootstrap support for H3H1Y7 as seed ortholog is 94%.

Group of orthologs #237. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:315

Q755B6              	100.00%		H3HDS0              	100.00%
Bootstrap support for Q755B6 as seed ortholog is 99%.
Bootstrap support for H3HDS0 as seed ortholog is 100%.

Group of orthologs #238. Best score 447 bits
Score difference with first non-orthologous sequence - A.gossypii:447 P.ramorum:447

Q753I4              	100.00%		H3G8P9              	100.00%
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for H3G8P9 as seed ortholog is 100%.

Group of orthologs #239. Best score 447 bits
Score difference with first non-orthologous sequence - A.gossypii:285 P.ramorum:246

Q75F95              	100.00%		H3GVG1              	100.00%
Bootstrap support for Q75F95 as seed ortholog is 100%.
Bootstrap support for H3GVG1 as seed ortholog is 100%.

Group of orthologs #240. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 P.ramorum:445

Q75DW1              	100.00%		H3G8W8              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 100%.
Bootstrap support for H3G8W8 as seed ortholog is 100%.

Group of orthologs #241. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:303 P.ramorum:36

Q752K7              	100.00%		H3HBW2              	100.00%
                    	       		H3GK38              	92.90%
                    	       		H3GK36              	17.44%
                    	       		H3HBW6              	10.10%
Bootstrap support for Q752K7 as seed ortholog is 100%.
Bootstrap support for H3HBW2 as seed ortholog is 68%.
Alternative seed ortholog is H3GX44 (36 bits away from this cluster)

Group of orthologs #242. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 P.ramorum:443

Q75BT9              	100.00%		H3GAH1              	100.00%
                    	       		H3GAH2              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for H3GAH1 as seed ortholog is 100%.
Bootstrap support for H3GAH2 as seed ortholog is 100%.

Group of orthologs #243. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:341

Q74ZS6              	100.00%		H3GAU6              	100.00%
Bootstrap support for Q74ZS6 as seed ortholog is 100%.
Bootstrap support for H3GAU6 as seed ortholog is 100%.

Group of orthologs #244. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:196

Q753X2              	100.00%		H3GA38              	100.00%
Bootstrap support for Q753X2 as seed ortholog is 99%.
Bootstrap support for H3GA38 as seed ortholog is 99%.

Group of orthologs #245. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:442 P.ramorum:442

Q75E56              	100.00%		H3GV61              	100.00%
                    	       		H3G7E1              	55.57%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for H3GV61 as seed ortholog is 100%.

Group of orthologs #246. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:205 P.ramorum:147

Q75AD4              	100.00%		H3G9G0              	100.00%
Bootstrap support for Q75AD4 as seed ortholog is 99%.
Bootstrap support for H3G9G0 as seed ortholog is 99%.

Group of orthologs #247. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:441 P.ramorum:441

Q75E77              	100.00%		H3G751              	100.00%
Bootstrap support for Q75E77 as seed ortholog is 100%.
Bootstrap support for H3G751 as seed ortholog is 100%.

Group of orthologs #248. Best score 439 bits
Score difference with first non-orthologous sequence - A.gossypii:439 P.ramorum:439

Q758F5              	100.00%		H3G9Z1              	100.00%
Bootstrap support for Q758F5 as seed ortholog is 100%.
Bootstrap support for H3G9Z1 as seed ortholog is 100%.

Group of orthologs #249. Best score 438 bits
Score difference with first non-orthologous sequence - A.gossypii:438 P.ramorum:249

Q752H4              	100.00%		H3GA81              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for H3GA81 as seed ortholog is 100%.

Group of orthologs #250. Best score 438 bits
Score difference with first non-orthologous sequence - A.gossypii:438 P.ramorum:438

Q759A5              	100.00%		H3GAY8              	100.00%
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for H3GAY8 as seed ortholog is 100%.

Group of orthologs #251. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:320 P.ramorum:192

Q74ZV2              	100.00%		H3G8X6              	100.00%
                    	       		H3G7A9              	18.79%
Bootstrap support for Q74ZV2 as seed ortholog is 100%.
Bootstrap support for H3G8X6 as seed ortholog is 99%.

Group of orthologs #252. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 P.ramorum:436

Q75F64              	100.00%		H3G5F5              	100.00%
                    	       		H3G8X8              	100.00%
                    	       		H3G7K6              	78.31%
Bootstrap support for Q75F64 as seed ortholog is 100%.
Bootstrap support for H3G5F5 as seed ortholog is 100%.
Bootstrap support for H3G8X8 as seed ortholog is 100%.

Group of orthologs #253. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 P.ramorum:348

Q75CR7              	100.00%		H3GAC1              	100.00%
Bootstrap support for Q75CR7 as seed ortholog is 100%.
Bootstrap support for H3GAC1 as seed ortholog is 100%.

Group of orthologs #254. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 P.ramorum:436

Q756G8              	100.00%		H3GPE9              	100.00%
Bootstrap support for Q756G8 as seed ortholog is 100%.
Bootstrap support for H3GPE9 as seed ortholog is 100%.

Group of orthologs #255. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 P.ramorum:435

Q751P6              	100.00%		H3GQ19              	100.00%
Bootstrap support for Q751P6 as seed ortholog is 100%.
Bootstrap support for H3GQ19 as seed ortholog is 100%.

Group of orthologs #256. Best score 434 bits
Score difference with first non-orthologous sequence - A.gossypii:434 P.ramorum:186

Q74ZK4              	100.00%		H3GA09              	100.00%
                    	       		H3GA84              	9.35%
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for H3GA09 as seed ortholog is 99%.

Group of orthologs #257. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:433 P.ramorum:433

Q759U6              	100.00%		H3GUI9              	100.00%
Q759Z6              	25.26%		
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for H3GUI9 as seed ortholog is 100%.

Group of orthologs #258. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:433 P.ramorum:433

Q750T5              	100.00%		H3G7T9              	100.00%
Bootstrap support for Q750T5 as seed ortholog is 100%.
Bootstrap support for H3G7T9 as seed ortholog is 100%.

Group of orthologs #259. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.ramorum:100

Q750T4              	100.00%		H3G5C7              	100.00%
Bootstrap support for Q750T4 as seed ortholog is 99%.
Bootstrap support for H3G5C7 as seed ortholog is 99%.

Group of orthologs #260. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:258 P.ramorum:173

Q755A5              	100.00%		H3G5S8              	100.00%
Bootstrap support for Q755A5 as seed ortholog is 100%.
Bootstrap support for H3G5S8 as seed ortholog is 99%.

Group of orthologs #261. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:431 P.ramorum:356

Q75F99              	100.00%		H3G8Z2              	100.00%
                    	       		H3G5L4              	78.18%
Bootstrap support for Q75F99 as seed ortholog is 100%.
Bootstrap support for H3G8Z2 as seed ortholog is 100%.

Group of orthologs #262. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 P.ramorum:430

Q75CB7              	100.00%		H3G762              	100.00%
Bootstrap support for Q75CB7 as seed ortholog is 100%.
Bootstrap support for H3G762 as seed ortholog is 100%.

Group of orthologs #263. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 P.ramorum:49

Q756G7              	100.00%		H3H3X5              	100.00%
Bootstrap support for Q756G7 as seed ortholog is 100%.
Bootstrap support for H3H3X5 as seed ortholog is 85%.

Group of orthologs #264. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 P.ramorum:428

Q75B59              	100.00%		H3G8E2              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for H3G8E2 as seed ortholog is 100%.

Group of orthologs #265. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 P.ramorum:428

Q74ZY9              	100.00%		H3GK74              	100.00%
Bootstrap support for Q74ZY9 as seed ortholog is 100%.
Bootstrap support for H3GK74 as seed ortholog is 100%.

Group of orthologs #266. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:368 P.ramorum:269

Q756W4              	100.00%		H3G5D1              	100.00%
Bootstrap support for Q756W4 as seed ortholog is 100%.
Bootstrap support for H3G5D1 as seed ortholog is 100%.

Group of orthologs #267. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.ramorum:74

Q756Q2              	100.00%		H3G9N8              	100.00%
Bootstrap support for Q756Q2 as seed ortholog is 99%.
Bootstrap support for H3G9N8 as seed ortholog is 98%.

Group of orthologs #268. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 P.ramorum:426

Q751A1              	100.00%		H3G756              	100.00%
Bootstrap support for Q751A1 as seed ortholog is 100%.
Bootstrap support for H3G756 as seed ortholog is 100%.

Group of orthologs #269. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 P.ramorum:425

Q754M2              	100.00%		H3G870              	100.00%
                    	       		H3G8A7              	8.70%
Bootstrap support for Q754M2 as seed ortholog is 100%.
Bootstrap support for H3G870 as seed ortholog is 100%.

Group of orthologs #270. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 P.ramorum:180

Q758U9              	100.00%		H3GA44              	100.00%
Bootstrap support for Q758U9 as seed ortholog is 100%.
Bootstrap support for H3GA44 as seed ortholog is 100%.

Group of orthologs #271. Best score 422 bits
Score difference with first non-orthologous sequence - A.gossypii:422 P.ramorum:163

Q750G3              	100.00%		H3G5M4              	100.00%
Bootstrap support for Q750G3 as seed ortholog is 100%.
Bootstrap support for H3G5M4 as seed ortholog is 99%.

Group of orthologs #272. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.ramorum:156

Q757K5              	100.00%		H3GA49              	100.00%
                    	       		H3G616              	17.83%
Bootstrap support for Q757K5 as seed ortholog is 100%.
Bootstrap support for H3GA49 as seed ortholog is 99%.

Group of orthologs #273. Best score 421 bits
Score difference with first non-orthologous sequence - A.gossypii:421 P.ramorum:421

Q75AK1              	100.00%		H3H3V4              	100.00%
                    	       		H3GK03              	15.06%
Bootstrap support for Q75AK1 as seed ortholog is 100%.
Bootstrap support for H3H3V4 as seed ortholog is 100%.

Group of orthologs #274. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:420 P.ramorum:420

Q758F2              	100.00%		H3H1D0              	100.00%
Q75E23              	8.41%		
Bootstrap support for Q758F2 as seed ortholog is 100%.
Bootstrap support for H3H1D0 as seed ortholog is 100%.

Group of orthologs #275. Best score 419 bits
Score difference with first non-orthologous sequence - A.gossypii:419 P.ramorum:419

Q75D13              	100.00%		H3G8E8              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 100%.
Bootstrap support for H3G8E8 as seed ortholog is 100%.

Group of orthologs #276. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 P.ramorum:418

Q75A67              	100.00%		H3G5D6              	100.00%
Bootstrap support for Q75A67 as seed ortholog is 100%.
Bootstrap support for H3G5D6 as seed ortholog is 100%.

Group of orthologs #277. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 P.ramorum:418

Q75EN8              	100.00%		H3G9L9              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for H3G9L9 as seed ortholog is 100%.

Group of orthologs #278. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:301 P.ramorum:344

Q754I9              	100.00%		H3GPJ8              	100.00%
Bootstrap support for Q754I9 as seed ortholog is 100%.
Bootstrap support for H3GPJ8 as seed ortholog is 100%.

Group of orthologs #279. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.ramorum:300

Q752H0              	100.00%		H3GTV2              	100.00%
Bootstrap support for Q752H0 as seed ortholog is 100%.
Bootstrap support for H3GTV2 as seed ortholog is 100%.

Group of orthologs #280. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 P.ramorum:74

Q74ZR2              	100.00%		H3HDB5              	100.00%
Bootstrap support for Q74ZR2 as seed ortholog is 100%.
Bootstrap support for H3HDB5 as seed ortholog is 98%.

Group of orthologs #281. Best score 416 bits
Score difference with first non-orthologous sequence - A.gossypii:373 P.ramorum:316

Q74ZX3              	100.00%		H3G9Z8              	100.00%
                    	       		H3G9Z7              	94.71%
Bootstrap support for Q74ZX3 as seed ortholog is 100%.
Bootstrap support for H3G9Z8 as seed ortholog is 100%.

Group of orthologs #282. Best score 415 bits
Score difference with first non-orthologous sequence - A.gossypii:203 P.ramorum:179

Q756N0              	100.00%		H3G8S6              	100.00%
Bootstrap support for Q756N0 as seed ortholog is 99%.
Bootstrap support for H3G8S6 as seed ortholog is 99%.

Group of orthologs #283. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:311 P.ramorum:225

Q756Z1              	100.00%		H3G9P9              	100.00%
                    	       		H3GB14              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 100%.
Bootstrap support for H3G9P9 as seed ortholog is 100%.
Bootstrap support for H3GB14 as seed ortholog is 100%.

Group of orthologs #284. Best score 412 bits
Score difference with first non-orthologous sequence - A.gossypii:412 P.ramorum:412

Q758R9              	100.00%		H3G886              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for H3G886 as seed ortholog is 100%.

Group of orthologs #285. Best score 412 bits
Score difference with first non-orthologous sequence - A.gossypii:412 P.ramorum:262

Q750Q5              	100.00%		H3H3A8              	100.00%
Bootstrap support for Q750Q5 as seed ortholog is 100%.
Bootstrap support for H3H3A8 as seed ortholog is 99%.

Group of orthologs #286. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:411 P.ramorum:411

Q75CV3              	100.00%		H3GCM9              	100.00%
Bootstrap support for Q75CV3 as seed ortholog is 100%.
Bootstrap support for H3GCM9 as seed ortholog is 100%.

Group of orthologs #287. Best score 410 bits
Score difference with first non-orthologous sequence - A.gossypii:410 P.ramorum:410

Q758L0              	100.00%		H3G8D0              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for H3G8D0 as seed ortholog is 100%.

Group of orthologs #288. Best score 409 bits
Score difference with first non-orthologous sequence - A.gossypii:409 P.ramorum:409

Q755C2              	100.00%		H3G5B1              	100.00%
Bootstrap support for Q755C2 as seed ortholog is 100%.
Bootstrap support for H3G5B1 as seed ortholog is 100%.

Group of orthologs #289. Best score 409 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:208

Q75EW9              	100.00%		H3GTT0              	100.00%
Bootstrap support for Q75EW9 as seed ortholog is 99%.
Bootstrap support for H3GTT0 as seed ortholog is 100%.

Group of orthologs #290. Best score 409 bits
Score difference with first non-orthologous sequence - A.gossypii:409 P.ramorum:110

Q753Z3              	100.00%		H3HAP2              	100.00%
Bootstrap support for Q753Z3 as seed ortholog is 100%.
Bootstrap support for H3HAP2 as seed ortholog is 96%.

Group of orthologs #291. Best score 407 bits
Score difference with first non-orthologous sequence - A.gossypii:407 P.ramorum:407

Q751T0              	100.00%		H3GMC4              	100.00%
Bootstrap support for Q751T0 as seed ortholog is 100%.
Bootstrap support for H3GMC4 as seed ortholog is 100%.

Group of orthologs #292. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 P.ramorum:84

Q75C94              	100.00%		H3G6Z5              	100.00%
Q751Z2              	10.82%		
Bootstrap support for Q75C94 as seed ortholog is 100%.
Bootstrap support for H3G6Z5 as seed ortholog is 96%.

Group of orthologs #293. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.ramorum:290

Q759R9              	100.00%		H3GAE2              	100.00%
Bootstrap support for Q759R9 as seed ortholog is 56%.
Alternative seed ortholog is Q75AM5 (5 bits away from this cluster)
Bootstrap support for H3GAE2 as seed ortholog is 100%.

Group of orthologs #294. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 P.ramorum:77

Q75BJ2              	100.00%		H3GAR9              	100.00%
Bootstrap support for Q75BJ2 as seed ortholog is 100%.
Bootstrap support for H3GAR9 as seed ortholog is 94%.

Group of orthologs #295. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:405 P.ramorum:405

Q752Q7              	100.00%		H3GA76              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 100%.
Bootstrap support for H3GA76 as seed ortholog is 100%.

Group of orthologs #296. Best score 403 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:403

Q75B16              	100.00%		H3GG43              	100.00%
Bootstrap support for Q75B16 as seed ortholog is 99%.
Bootstrap support for H3GG43 as seed ortholog is 100%.

Group of orthologs #297. Best score 403 bits
Score difference with first non-orthologous sequence - A.gossypii:403 P.ramorum:255

Q757U8              	100.00%		H3GSH8              	100.00%
Bootstrap support for Q757U8 as seed ortholog is 100%.
Bootstrap support for H3GSH8 as seed ortholog is 100%.

Group of orthologs #298. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:401 P.ramorum:228

Q75EB0              	100.00%		H3G928              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for H3G928 as seed ortholog is 100%.

Group of orthologs #299. Best score 400 bits
Score difference with first non-orthologous sequence - A.gossypii:400 P.ramorum:400

Q750Z9              	100.00%		H3GFN8              	100.00%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for H3GFN8 as seed ortholog is 100%.

Group of orthologs #300. Best score 400 bits
Score difference with first non-orthologous sequence - A.gossypii:400 P.ramorum:400

Q752V5              	100.00%		H3GLA6              	100.00%
Bootstrap support for Q752V5 as seed ortholog is 100%.
Bootstrap support for H3GLA6 as seed ortholog is 100%.

Group of orthologs #301. Best score 398 bits
Score difference with first non-orthologous sequence - A.gossypii:398 P.ramorum:139

Q750R4              	100.00%		H3G8L0              	100.00%
                    	       		H3G8K8              	77.81%
Bootstrap support for Q750R4 as seed ortholog is 100%.
Bootstrap support for H3G8L0 as seed ortholog is 99%.

Group of orthologs #302. Best score 398 bits
Score difference with first non-orthologous sequence - A.gossypii:398 P.ramorum:398

Q75E89              	100.00%		H3G6Y2              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for H3G6Y2 as seed ortholog is 100%.

Group of orthologs #303. Best score 396 bits
Score difference with first non-orthologous sequence - A.gossypii:396 P.ramorum:396

Q75CF4              	100.00%		H3GQY6              	100.00%
Bootstrap support for Q75CF4 as seed ortholog is 100%.
Bootstrap support for H3GQY6 as seed ortholog is 100%.

Group of orthologs #304. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:395 P.ramorum:197

Q750E3              	100.00%		H3GAI2              	100.00%
                    	       		H3G9B2              	38.25%
Bootstrap support for Q750E3 as seed ortholog is 100%.
Bootstrap support for H3GAI2 as seed ortholog is 99%.

Group of orthologs #305. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:204 P.ramorum:395

Q750S7              	100.00%		H3G847              	100.00%
Bootstrap support for Q750S7 as seed ortholog is 100%.
Bootstrap support for H3G847 as seed ortholog is 100%.

Group of orthologs #306. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:238 P.ramorum:177

Q75AE1              	100.00%		H3G669              	100.00%
Bootstrap support for Q75AE1 as seed ortholog is 100%.
Bootstrap support for H3G669 as seed ortholog is 99%.

Group of orthologs #307. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:395 P.ramorum:395

Q756M4              	100.00%		H3GAC0              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for H3GAC0 as seed ortholog is 100%.

Group of orthologs #308. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:395 P.ramorum:395

Q75AZ9              	100.00%		H3G8K7              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for H3G8K7 as seed ortholog is 100%.

Group of orthologs #309. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:395 P.ramorum:314

Q75A83              	100.00%		H3GG11              	100.00%
Bootstrap support for Q75A83 as seed ortholog is 100%.
Bootstrap support for H3GG11 as seed ortholog is 100%.

Group of orthologs #310. Best score 393 bits
Score difference with first non-orthologous sequence - A.gossypii:393 P.ramorum:393

Q754W4              	100.00%		H3G761              	100.00%
Q75DX5              	9.76%		H3G8E3              	14.15%
                    	       		H3GAC6              	12.26%
Bootstrap support for Q754W4 as seed ortholog is 100%.
Bootstrap support for H3G761 as seed ortholog is 100%.

Group of orthologs #311. Best score 393 bits
Score difference with first non-orthologous sequence - A.gossypii:393 P.ramorum:393

Q75EI5              	100.00%		H3G5V8              	100.00%
Bootstrap support for Q75EI5 as seed ortholog is 100%.
Bootstrap support for H3G5V8 as seed ortholog is 100%.

Group of orthologs #312. Best score 392 bits
Score difference with first non-orthologous sequence - A.gossypii:392 P.ramorum:126

Q754U8              	100.00%		H3G7N9              	100.00%
Bootstrap support for Q754U8 as seed ortholog is 100%.
Bootstrap support for H3G7N9 as seed ortholog is 98%.

Group of orthologs #313. Best score 392 bits
Score difference with first non-orthologous sequence - A.gossypii:392 P.ramorum:392

Q750H4              	100.00%		H3GIM1              	100.00%
Bootstrap support for Q750H4 as seed ortholog is 100%.
Bootstrap support for H3GIM1 as seed ortholog is 100%.

Group of orthologs #314. Best score 391 bits
Score difference with first non-orthologous sequence - A.gossypii:391 P.ramorum:324

Q751I9              	100.00%		H3G8V7              	100.00%
                    	       		H3G5G8              	55.84%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for H3G8V7 as seed ortholog is 100%.

Group of orthologs #315. Best score 391 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.ramorum:241

Q75C39              	100.00%		H3G791              	100.00%
Bootstrap support for Q75C39 as seed ortholog is 100%.
Bootstrap support for H3G791 as seed ortholog is 100%.

Group of orthologs #316. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 P.ramorum:310

Q750E9              	100.00%		H3G9L0              	100.00%
Bootstrap support for Q750E9 as seed ortholog is 100%.
Bootstrap support for H3G9L0 as seed ortholog is 100%.

Group of orthologs #317. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 P.ramorum:192

Q753L0              	100.00%		H3G9X7              	100.00%
Bootstrap support for Q753L0 as seed ortholog is 100%.
Bootstrap support for H3G9X7 as seed ortholog is 100%.

Group of orthologs #318. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 P.ramorum:211

Q74ZS1              	100.00%		H3G8F6              	100.00%
                    	       		H3GED8              	63.97%
Bootstrap support for Q74ZS1 as seed ortholog is 100%.
Bootstrap support for H3G8F6 as seed ortholog is 100%.

Group of orthologs #319. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 P.ramorum:386

Q750X3              	100.00%		H3G9F8              	100.00%
Bootstrap support for Q750X3 as seed ortholog is 100%.
Bootstrap support for H3G9F8 as seed ortholog is 100%.

Group of orthologs #320. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 P.ramorum:386

Q754I8              	100.00%		H3G7E8              	100.00%
Bootstrap support for Q754I8 as seed ortholog is 100%.
Bootstrap support for H3G7E8 as seed ortholog is 100%.

Group of orthologs #321. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 P.ramorum:385

Q75A13              	100.00%		H3GKE7              	100.00%
                    	       		H3HAI9              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for H3GKE7 as seed ortholog is 100%.
Bootstrap support for H3HAI9 as seed ortholog is 100%.

Group of orthologs #322. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 P.ramorum:385

Q75EW4              	100.00%		H3G4Y5              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for H3G4Y5 as seed ortholog is 100%.

Group of orthologs #323. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 P.ramorum:385

Q75DZ9              	100.00%		H3G9E8              	100.00%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for H3G9E8 as seed ortholog is 100%.

Group of orthologs #324. Best score 384 bits
Score difference with first non-orthologous sequence - A.gossypii:384 P.ramorum:384

Q753D4              	100.00%		H3G9Y5              	100.00%
Bootstrap support for Q753D4 as seed ortholog is 100%.
Bootstrap support for H3G9Y5 as seed ortholog is 100%.

Group of orthologs #325. Best score 384 bits
Score difference with first non-orthologous sequence - A.gossypii:384 P.ramorum:141

Q758J2              	100.00%		H3G9B3              	100.00%
Bootstrap support for Q758J2 as seed ortholog is 100%.
Bootstrap support for H3G9B3 as seed ortholog is 99%.

Group of orthologs #326. Best score 384 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.ramorum:186

Q75EJ6              	100.00%		H3GA00              	100.00%
Bootstrap support for Q75EJ6 as seed ortholog is 99%.
Bootstrap support for H3GA00 as seed ortholog is 99%.

Group of orthologs #327. Best score 384 bits
Score difference with first non-orthologous sequence - A.gossypii:384 P.ramorum:384

Q00063              	100.00%		H3GWU6              	100.00%
Bootstrap support for Q00063 as seed ortholog is 100%.
Bootstrap support for H3GWU6 as seed ortholog is 100%.

Group of orthologs #328. Best score 383 bits
Score difference with first non-orthologous sequence - A.gossypii:204 P.ramorum:215

Q74ZC1              	100.00%		H3GBC9              	100.00%
Bootstrap support for Q74ZC1 as seed ortholog is 99%.
Bootstrap support for H3GBC9 as seed ortholog is 100%.

Group of orthologs #329. Best score 383 bits
Score difference with first non-orthologous sequence - A.gossypii:383 P.ramorum:131

Q759V7              	100.00%		H3G8E1              	100.00%
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for H3G8E1 as seed ortholog is 99%.

Group of orthologs #330. Best score 383 bits
Score difference with first non-orthologous sequence - A.gossypii:383 P.ramorum:383

Q756Z0              	100.00%		H3GBN6              	100.00%
Bootstrap support for Q756Z0 as seed ortholog is 100%.
Bootstrap support for H3GBN6 as seed ortholog is 100%.

Group of orthologs #331. Best score 382 bits
Score difference with first non-orthologous sequence - A.gossypii:382 P.ramorum:195

Q75DX7              	100.00%		H3G5K2              	100.00%
Bootstrap support for Q75DX7 as seed ortholog is 100%.
Bootstrap support for H3G5K2 as seed ortholog is 100%.

Group of orthologs #332. Best score 382 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.ramorum:273

Q75BP5              	100.00%		H3GER8              	100.00%
Bootstrap support for Q75BP5 as seed ortholog is 97%.
Bootstrap support for H3GER8 as seed ortholog is 100%.

Group of orthologs #333. Best score 382 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:133

Q74ZJ0              	100.00%		H3GY14              	100.00%
Bootstrap support for Q74ZJ0 as seed ortholog is 99%.
Bootstrap support for H3GY14 as seed ortholog is 98%.

Group of orthologs #334. Best score 379 bits
Score difference with first non-orthologous sequence - A.gossypii:379 P.ramorum:379

Q758T5              	100.00%		H3G9K6              	100.00%
                    	       		H3G6Z0              	6.27%
Bootstrap support for Q758T5 as seed ortholog is 100%.
Bootstrap support for H3G9K6 as seed ortholog is 100%.

Group of orthologs #335. Best score 379 bits
Score difference with first non-orthologous sequence - A.gossypii:379 P.ramorum:294

Q758I6              	100.00%		H3GZB3              	100.00%
Bootstrap support for Q758I6 as seed ortholog is 100%.
Bootstrap support for H3GZB3 as seed ortholog is 100%.

Group of orthologs #336. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:378 P.ramorum:378

Q75A16              	100.00%		H3G8B8              	100.00%
Bootstrap support for Q75A16 as seed ortholog is 100%.
Bootstrap support for H3G8B8 as seed ortholog is 100%.

Group of orthologs #337. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:378 P.ramorum:252

Q75CF2              	100.00%		H3GB43              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 100%.
Bootstrap support for H3GB43 as seed ortholog is 100%.

Group of orthologs #338. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 P.ramorum:377

Q74ZH0              	100.00%		H3GWL4              	100.00%
Bootstrap support for Q74ZH0 as seed ortholog is 100%.
Bootstrap support for H3GWL4 as seed ortholog is 100%.

Group of orthologs #339. Best score 376 bits
Score difference with first non-orthologous sequence - A.gossypii:288 P.ramorum:280

Q752Y1              	100.00%		H3G9R3              	100.00%
Bootstrap support for Q752Y1 as seed ortholog is 100%.
Bootstrap support for H3G9R3 as seed ortholog is 100%.

Group of orthologs #340. Best score 376 bits
Score difference with first non-orthologous sequence - A.gossypii:320 P.ramorum:261

Q75BY3              	100.00%		H3HBV5              	100.00%
Bootstrap support for Q75BY3 as seed ortholog is 100%.
Bootstrap support for H3HBV5 as seed ortholog is 100%.

Group of orthologs #341. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:375 P.ramorum:145

Q74Z01              	100.00%		H3G841              	100.00%
Q74Z02              	62.95%		
Bootstrap support for Q74Z01 as seed ortholog is 100%.
Bootstrap support for H3G841 as seed ortholog is 99%.

Group of orthologs #342. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:142 P.ramorum:118

Q754N7              	100.00%		H3H7S1              	100.00%
                    	       		H3H546              	34.15%
Bootstrap support for Q754N7 as seed ortholog is 99%.
Bootstrap support for H3H7S1 as seed ortholog is 99%.

Group of orthologs #343. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:374 P.ramorum:80

Q75E90              	100.00%		H3G9M8              	100.00%
Bootstrap support for Q75E90 as seed ortholog is 100%.
Bootstrap support for H3G9M8 as seed ortholog is 99%.

Group of orthologs #344. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:42

Q75A61              	100.00%		H3G8Q7              	100.00%
Bootstrap support for Q75A61 as seed ortholog is 94%.
Bootstrap support for H3G8Q7 as seed ortholog is 88%.

Group of orthologs #345. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:373 P.ramorum:373

Q752W7              	100.00%		H3GG34              	100.00%
Bootstrap support for Q752W7 as seed ortholog is 100%.
Bootstrap support for H3GG34 as seed ortholog is 100%.

Group of orthologs #346. Best score 372 bits
Score difference with first non-orthologous sequence - A.gossypii:313 P.ramorum:187

Q754V9              	100.00%		H3GV09              	100.00%
Bootstrap support for Q754V9 as seed ortholog is 100%.
Bootstrap support for H3GV09 as seed ortholog is 99%.

Group of orthologs #347. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:371 P.ramorum:371

Q74ZH6              	100.00%		H3G9W9              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for H3G9W9 as seed ortholog is 100%.

Group of orthologs #348. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:371 P.ramorum:371

Q758K7              	100.00%		H3GC60              	100.00%
Bootstrap support for Q758K7 as seed ortholog is 100%.
Bootstrap support for H3GC60 as seed ortholog is 100%.

Group of orthologs #349. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:371 P.ramorum:371

Q74Z13              	100.00%		H3GQL2              	100.00%
Bootstrap support for Q74Z13 as seed ortholog is 100%.
Bootstrap support for H3GQL2 as seed ortholog is 100%.

Group of orthologs #350. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:369 P.ramorum:369

Q752M1              	100.00%		H3G5W3              	100.00%
Bootstrap support for Q752M1 as seed ortholog is 100%.
Bootstrap support for H3G5W3 as seed ortholog is 100%.

Group of orthologs #351. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:369 P.ramorum:227

Q751B0              	100.00%		H3G6Y6              	100.00%
Bootstrap support for Q751B0 as seed ortholog is 100%.
Bootstrap support for H3G6Y6 as seed ortholog is 100%.

Group of orthologs #352. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:124

Q75B34              	100.00%		H3GA03              	100.00%
Bootstrap support for Q75B34 as seed ortholog is 99%.
Bootstrap support for H3GA03 as seed ortholog is 99%.

Group of orthologs #353. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:369 P.ramorum:369

Q757D2              	100.00%		H3GU36              	100.00%
Bootstrap support for Q757D2 as seed ortholog is 100%.
Bootstrap support for H3GU36 as seed ortholog is 100%.

Group of orthologs #354. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:369 P.ramorum:82

Q74ZR6              	100.00%		H3H562              	100.00%
Bootstrap support for Q74ZR6 as seed ortholog is 100%.
Bootstrap support for H3H562 as seed ortholog is 89%.

Group of orthologs #355. Best score 368 bits
Score difference with first non-orthologous sequence - A.gossypii:368 P.ramorum:368

Q75ER2              	100.00%		H3GLN2              	100.00%
                    	       		H3GLM4              	34.81%
                    	       		H3GLM0              	33.92%
                    	       		H3GLM3              	7.33%
Bootstrap support for Q75ER2 as seed ortholog is 100%.
Bootstrap support for H3GLN2 as seed ortholog is 100%.

Group of orthologs #356. Best score 368 bits
Score difference with first non-orthologous sequence - A.gossypii:368 P.ramorum:368

Q75CF0              	100.00%		H3H283              	100.00%
Bootstrap support for Q75CF0 as seed ortholog is 100%.
Bootstrap support for H3H283 as seed ortholog is 100%.

Group of orthologs #357. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:155

Q752Y9              	100.00%		H3G8G1              	100.00%
                    	       		H3G5N7              	24.42%
                    	       		H3H077              	23.64%
                    	       		H3GAG3              	23.59%
                    	       		H3G7V5              	22.91%
                    	       		H3G523              	20.17%
                    	       		H3GAB2              	19.19%
                    	       		H3H425              	17.38%
Bootstrap support for Q752Y9 as seed ortholog is 98%.
Bootstrap support for H3G8G1 as seed ortholog is 99%.

Group of orthologs #358. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:289 P.ramorum:364

Q74ZL8              	100.00%		H3GHE4              	100.00%
Bootstrap support for Q74ZL8 as seed ortholog is 100%.
Bootstrap support for H3GHE4 as seed ortholog is 100%.

Group of orthologs #359. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:254 P.ramorum:99

Q75F61              	100.00%		H3GD15              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 100%.
Bootstrap support for H3GD15 as seed ortholog is 97%.

Group of orthologs #360. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:362 P.ramorum:137

Q758F4              	100.00%		H3G8X2              	100.00%
Q75DI5              	7.14%		
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for H3G8X2 as seed ortholog is 99%.

Group of orthologs #361. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:193

Q753V5              	100.00%		H3GRS2              	100.00%
Bootstrap support for Q753V5 as seed ortholog is 88%.
Bootstrap support for H3GRS2 as seed ortholog is 99%.

Group of orthologs #362. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:361 P.ramorum:361

Q759Q4              	100.00%		H3GWN7              	100.00%
Bootstrap support for Q759Q4 as seed ortholog is 100%.
Bootstrap support for H3GWN7 as seed ortholog is 100%.

Group of orthologs #363. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:19 P.ramorum:73

Q75BI5              	100.00%		H3GW83              	100.00%
Bootstrap support for Q75BI5 as seed ortholog is 75%.
Bootstrap support for H3GW83 as seed ortholog is 92%.

Group of orthologs #364. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:360 P.ramorum:14

Q759A9              	100.00%		H3GAP1              	100.00%
                    	       		H3GAQ6              	87.29%
                    	       		H3H2B2              	76.76%
                    	       		H3GAQ9              	76.42%
                    	       		H3H2B4              	76.42%
                    	       		H3G6W1              	21.74%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for H3GAP1 as seed ortholog is 63%.
Alternative seed ortholog is H3GAC9 (14 bits away from this cluster)

Group of orthologs #365. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:360 P.ramorum:360

Q750C5              	100.00%		H3GIT6              	100.00%
                    	       		H3GIT7              	45.73%
Bootstrap support for Q750C5 as seed ortholog is 100%.
Bootstrap support for H3GIT6 as seed ortholog is 100%.

Group of orthologs #366. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 P.ramorum:359

Q75AE7              	100.00%		H3G8Q6              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for H3G8Q6 as seed ortholog is 100%.

Group of orthologs #367. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:278 P.ramorum:359

Q75AP7              	100.00%		H3G973              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 100%.
Bootstrap support for H3G973 as seed ortholog is 100%.

Group of orthologs #368. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 P.ramorum:359

Q75F62              	100.00%		H3G882              	100.00%
Bootstrap support for Q75F62 as seed ortholog is 100%.
Bootstrap support for H3G882 as seed ortholog is 100%.

Group of orthologs #369. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:359 P.ramorum:126

Q8J1G4              	100.00%		H3GBC8              	100.00%
Bootstrap support for Q8J1G4 as seed ortholog is 100%.
Bootstrap support for H3GBC8 as seed ortholog is 99%.

Group of orthologs #370. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 P.ramorum:358

Q75EK2              	100.00%		H3GA60              	100.00%
                    	       		H3GXA3              	40.82%
Bootstrap support for Q75EK2 as seed ortholog is 100%.
Bootstrap support for H3GA60 as seed ortholog is 100%.

Group of orthologs #371. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 P.ramorum:358

Q757D1              	100.00%		H3GVL3              	100.00%
                    	       		H3GP70              	9.02%
Bootstrap support for Q757D1 as seed ortholog is 100%.
Bootstrap support for H3GVL3 as seed ortholog is 100%.

Group of orthologs #372. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 P.ramorum:356

Q756R6              	100.00%		H3GSD4              	100.00%
Bootstrap support for Q756R6 as seed ortholog is 100%.
Bootstrap support for H3GSD4 as seed ortholog is 100%.

Group of orthologs #373. Best score 355 bits
Score difference with first non-orthologous sequence - A.gossypii:355 P.ramorum:355

Q75CW2              	100.00%		H3G883              	100.00%
Bootstrap support for Q75CW2 as seed ortholog is 100%.
Bootstrap support for H3G883 as seed ortholog is 100%.

Group of orthologs #374. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 P.ramorum:89

Q756R4              	100.00%		H3GF94              	100.00%
                    	       		H3H076              	58.89%
Bootstrap support for Q756R4 as seed ortholog is 100%.
Bootstrap support for H3GF94 as seed ortholog is 99%.

Group of orthologs #375. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 P.ramorum:354

Q752K8              	100.00%		H3GCA3              	100.00%
Bootstrap support for Q752K8 as seed ortholog is 100%.
Bootstrap support for H3GCA3 as seed ortholog is 100%.

Group of orthologs #376. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:353 P.ramorum:353

Q75DA2              	100.00%		H3G4X5              	100.00%
                    	       		H3HAP6              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for H3G4X5 as seed ortholog is 100%.
Bootstrap support for H3HAP6 as seed ortholog is 100%.

Group of orthologs #377. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:353 P.ramorum:353

Q75BC3              	100.00%		H3G836              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for H3G836 as seed ortholog is 100%.

Group of orthologs #378. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:227 P.ramorum:90

Q752E9              	100.00%		H3GWC2              	100.00%
Bootstrap support for Q752E9 as seed ortholog is 100%.
Bootstrap support for H3GWC2 as seed ortholog is 98%.

Group of orthologs #379. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:353 P.ramorum:353

Q75F36              	100.00%		H3GPE0              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for H3GPE0 as seed ortholog is 100%.

Group of orthologs #380. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:352 P.ramorum:352

Q75E88              	100.00%		H3G4X1              	100.00%
Q753H9              	82.49%		H3G9E4              	78.36%
Q75E76              	49.00%		
Bootstrap support for Q75E88 as seed ortholog is 100%.
Bootstrap support for H3G4X1 as seed ortholog is 100%.

Group of orthologs #381. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:352 P.ramorum:352

Q754K1              	100.00%		H3H2Y0              	100.00%
Bootstrap support for Q754K1 as seed ortholog is 100%.
Bootstrap support for H3H2Y0 as seed ortholog is 100%.

Group of orthologs #382. Best score 351 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:351

Q758U3              	100.00%		H3GAC3              	100.00%
Bootstrap support for Q758U3 as seed ortholog is 99%.
Bootstrap support for H3GAC3 as seed ortholog is 100%.

Group of orthologs #383. Best score 350 bits
Score difference with first non-orthologous sequence - A.gossypii:350 P.ramorum:350

Q757E3              	100.00%		H3G6D2              	100.00%
Bootstrap support for Q757E3 as seed ortholog is 100%.
Bootstrap support for H3G6D2 as seed ortholog is 100%.

Group of orthologs #384. Best score 350 bits
Score difference with first non-orthologous sequence - A.gossypii:350 P.ramorum:263

Q75DS8              	100.00%		H3GAS1              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for H3GAS1 as seed ortholog is 100%.

Group of orthologs #385. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:349 P.ramorum:233

Q755K2              	100.00%		H3GNG9              	100.00%
Bootstrap support for Q755K2 as seed ortholog is 100%.
Bootstrap support for H3GNG9 as seed ortholog is 99%.

Group of orthologs #386. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:8 P.ramorum:57

Q754Q3              	100.00%		H3GG23              	100.00%
Q75CV7              	10.21%		B9VTN8              	16.17%
Bootstrap support for Q754Q3 as seed ortholog is 57%.
Alternative seed ortholog is Q756M2 (8 bits away from this cluster)
Bootstrap support for H3GG23 as seed ortholog is 93%.

Group of orthologs #387. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 P.ramorum:346

Q74ZF8              	100.00%		H3GA62              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for H3GA62 as seed ortholog is 100%.

Group of orthologs #388. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 P.ramorum:346

Q756N5              	100.00%		H3GAM6              	100.00%
Bootstrap support for Q756N5 as seed ortholog is 100%.
Bootstrap support for H3GAM6 as seed ortholog is 100%.

Group of orthologs #389. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 P.ramorum:346

Q75CQ5              	100.00%		H3G6F3              	100.00%
Bootstrap support for Q75CQ5 as seed ortholog is 100%.
Bootstrap support for H3G6F3 as seed ortholog is 100%.

Group of orthologs #390. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 P.ramorum:210

Q75CB5              	100.00%		H3GSZ7              	100.00%
Bootstrap support for Q75CB5 as seed ortholog is 100%.
Bootstrap support for H3GSZ7 as seed ortholog is 99%.

Group of orthologs #391. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:345

Q753W1              	100.00%		H3G9S1              	100.00%
Bootstrap support for Q753W1 as seed ortholog is 92%.
Bootstrap support for H3G9S1 as seed ortholog is 100%.

Group of orthologs #392. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:160

Q759M3              	100.00%		H3G7T0              	100.00%
Bootstrap support for Q759M3 as seed ortholog is 99%.
Bootstrap support for H3G7T0 as seed ortholog is 100%.

Group of orthologs #393. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:345 P.ramorum:345

Q74ZC6              	100.00%		H3H563              	100.00%
Bootstrap support for Q74ZC6 as seed ortholog is 100%.
Bootstrap support for H3H563 as seed ortholog is 100%.

Group of orthologs #394. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.ramorum:235

Q74ZA9              	100.00%		H3G7J3              	100.00%
Bootstrap support for Q74ZA9 as seed ortholog is 100%.
Bootstrap support for H3G7J3 as seed ortholog is 100%.

Group of orthologs #395. Best score 343 bits
Score difference with first non-orthologous sequence - A.gossypii:343 P.ramorum:343

Q753E5              	100.00%		H3HCQ5              	100.00%
Bootstrap support for Q753E5 as seed ortholog is 100%.
Bootstrap support for H3HCQ5 as seed ortholog is 100%.

Group of orthologs #396. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 P.ramorum:200

Q751E0              	100.00%		H3G6P7              	100.00%
Bootstrap support for Q751E0 as seed ortholog is 100%.
Bootstrap support for H3G6P7 as seed ortholog is 99%.

Group of orthologs #397. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 P.ramorum:342

Q75E53              	100.00%		H3G943              	100.00%
Bootstrap support for Q75E53 as seed ortholog is 100%.
Bootstrap support for H3G943 as seed ortholog is 100%.

Group of orthologs #398. Best score 341 bits
Score difference with first non-orthologous sequence - A.gossypii:341 P.ramorum:341

Q75ED5              	100.00%		H3GJS1              	100.00%
Bootstrap support for Q75ED5 as seed ortholog is 100%.
Bootstrap support for H3GJS1 as seed ortholog is 100%.

Group of orthologs #399. Best score 339 bits
Score difference with first non-orthologous sequence - A.gossypii:283 P.ramorum:269

Q74ZK9              	100.00%		H3GAH8              	100.00%
                    	       		H3H0V9              	20.38%
Bootstrap support for Q74ZK9 as seed ortholog is 100%.
Bootstrap support for H3GAH8 as seed ortholog is 100%.

Group of orthologs #400. Best score 339 bits
Score difference with first non-orthologous sequence - A.gossypii:339 P.ramorum:339

Q75EP8              	100.00%		H3GCM4              	100.00%
Bootstrap support for Q75EP8 as seed ortholog is 100%.
Bootstrap support for H3GCM4 as seed ortholog is 100%.

Group of orthologs #401. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:262 P.ramorum:338

Q759N3              	100.00%		H3HCZ8              	100.00%
Bootstrap support for Q759N3 as seed ortholog is 100%.
Bootstrap support for H3HCZ8 as seed ortholog is 100%.

Group of orthologs #402. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:280 P.ramorum:336

Q750P2              	100.00%		H3GKU1              	100.00%
Bootstrap support for Q750P2 as seed ortholog is 100%.
Bootstrap support for H3GKU1 as seed ortholog is 100%.

Group of orthologs #403. Best score 335 bits
Score difference with first non-orthologous sequence - A.gossypii:335 P.ramorum:335

Q758H4              	100.00%		H3GAV2              	100.00%
Bootstrap support for Q758H4 as seed ortholog is 100%.
Bootstrap support for H3GAV2 as seed ortholog is 100%.

Group of orthologs #404. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:334 P.ramorum:215

Q753X3              	100.00%		H3G5G7              	100.00%
Bootstrap support for Q753X3 as seed ortholog is 100%.
Bootstrap support for H3G5G7 as seed ortholog is 100%.

Group of orthologs #405. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:334 P.ramorum:334

Q74ZU1              	100.00%		H3GAR2              	100.00%
Bootstrap support for Q74ZU1 as seed ortholog is 100%.
Bootstrap support for H3GAR2 as seed ortholog is 100%.

Group of orthologs #406. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.ramorum:107

Q752X1              	100.00%		H3GWG5              	100.00%
Bootstrap support for Q752X1 as seed ortholog is 99%.
Bootstrap support for H3GWG5 as seed ortholog is 99%.

Group of orthologs #407. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:333 P.ramorum:333

Q75C15              	100.00%		H3GWA8              	100.00%
Bootstrap support for Q75C15 as seed ortholog is 100%.
Bootstrap support for H3GWA8 as seed ortholog is 100%.

Group of orthologs #408. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:333 P.ramorum:333

Q75CL7              	100.00%		H3H038              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for H3H038 as seed ortholog is 100%.

Group of orthologs #409. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:332 P.ramorum:332

Q75CI4              	100.00%		H3G7S9              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for H3G7S9 as seed ortholog is 100%.

Group of orthologs #410. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:329

Q754S8              	100.00%		H3G782              	100.00%
                    	       		H3GL68              	8.31%
Bootstrap support for Q754S8 as seed ortholog is 99%.
Bootstrap support for H3G782 as seed ortholog is 100%.

Group of orthologs #411. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:217 P.ramorum:183

Q756B9              	100.00%		H3G4X2              	100.00%
Bootstrap support for Q756B9 as seed ortholog is 99%.
Bootstrap support for H3G4X2 as seed ortholog is 100%.

Group of orthologs #412. Best score 328 bits
Score difference with first non-orthologous sequence - A.gossypii:328 P.ramorum:328

Q757P6              	100.00%		H3GK30              	100.00%
Bootstrap support for Q757P6 as seed ortholog is 100%.
Bootstrap support for H3GK30 as seed ortholog is 100%.

Group of orthologs #413. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 P.ramorum:194

Q74ZU5              	100.00%		H3G8Y4              	100.00%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for H3G8Y4 as seed ortholog is 100%.

Group of orthologs #414. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 P.ramorum:327

Q754D6              	100.00%		H3G957              	100.00%
Bootstrap support for Q754D6 as seed ortholog is 100%.
Bootstrap support for H3G957 as seed ortholog is 100%.

Group of orthologs #415. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 P.ramorum:327

Q756S9              	100.00%		H3GDK0              	100.00%
Bootstrap support for Q756S9 as seed ortholog is 100%.
Bootstrap support for H3GDK0 as seed ortholog is 100%.

Group of orthologs #416. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 P.ramorum:205

Q755A1              	100.00%		H3GGW8              	100.00%
Bootstrap support for Q755A1 as seed ortholog is 100%.
Bootstrap support for H3GGW8 as seed ortholog is 99%.

Group of orthologs #417. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:327 P.ramorum:327

Q757Y2              	100.00%		H3HB70              	100.00%
Bootstrap support for Q757Y2 as seed ortholog is 100%.
Bootstrap support for H3HB70 as seed ortholog is 100%.

Group of orthologs #418. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 P.ramorum:326

Q753Q6              	100.00%		H3G7E6              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 100%.
Bootstrap support for H3G7E6 as seed ortholog is 100%.

Group of orthologs #419. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 P.ramorum:240

Q759J7              	100.00%		H3G7P3              	100.00%
Bootstrap support for Q759J7 as seed ortholog is 100%.
Bootstrap support for H3G7P3 as seed ortholog is 100%.

Group of orthologs #420. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.ramorum:83

Q757W8              	100.00%		H3GKU6              	100.00%
Bootstrap support for Q757W8 as seed ortholog is 99%.
Bootstrap support for H3GKU6 as seed ortholog is 97%.

Group of orthologs #421. Best score 325 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:325

Q754X6              	100.00%		H3GAM5              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 98%.
Bootstrap support for H3GAM5 as seed ortholog is 100%.

Group of orthologs #422. Best score 325 bits
Score difference with first non-orthologous sequence - A.gossypii:325 P.ramorum:325

Q75BE8              	100.00%		H3G9V7              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for H3G9V7 as seed ortholog is 100%.

Group of orthologs #423. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 P.ramorum:324

Q75B10              	100.00%		H3GUW2              	100.00%
                    	       		H3G7C3              	47.41%
Bootstrap support for Q75B10 as seed ortholog is 100%.
Bootstrap support for H3GUW2 as seed ortholog is 100%.

Group of orthologs #424. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.ramorum:116

Q751R9              	100.00%		H3G7H3              	100.00%
Bootstrap support for Q751R9 as seed ortholog is 100%.
Bootstrap support for H3G7H3 as seed ortholog is 99%.

Group of orthologs #425. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:323 P.ramorum:323

Q75CG9              	100.00%		H3G9L7              	100.00%
Bootstrap support for Q75CG9 as seed ortholog is 100%.
Bootstrap support for H3G9L7 as seed ortholog is 100%.

Group of orthologs #426. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.ramorum:323

Q75CI8              	100.00%		H3GA10              	100.00%
Bootstrap support for Q75CI8 as seed ortholog is 99%.
Bootstrap support for H3GA10 as seed ortholog is 100%.

Group of orthologs #427. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 P.ramorum:322

Q75CQ6              	100.00%		H3GG49              	100.00%
Bootstrap support for Q75CQ6 as seed ortholog is 100%.
Bootstrap support for H3GG49 as seed ortholog is 100%.

Group of orthologs #428. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 P.ramorum:322

Q75F11              	100.00%		H3GNU0              	100.00%
Bootstrap support for Q75F11 as seed ortholog is 100%.
Bootstrap support for H3GNU0 as seed ortholog is 100%.

Group of orthologs #429. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 P.ramorum:321

Q758F6              	100.00%		H3G6P3              	100.00%
Bootstrap support for Q758F6 as seed ortholog is 100%.
Bootstrap support for H3G6P3 as seed ortholog is 100%.

Group of orthologs #430. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 P.ramorum:321

Q75B77              	100.00%		H3G565              	100.00%
Bootstrap support for Q75B77 as seed ortholog is 100%.
Bootstrap support for H3G565 as seed ortholog is 100%.

Group of orthologs #431. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 P.ramorum:321

Q757G6              	100.00%		H3GBX6              	100.00%
Bootstrap support for Q757G6 as seed ortholog is 100%.
Bootstrap support for H3GBX6 as seed ortholog is 100%.

Group of orthologs #432. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:320 P.ramorum:320

Q751N9              	100.00%		H3GNL8              	100.00%
                    	       		H3GN52              	5.53%
Bootstrap support for Q751N9 as seed ortholog is 100%.
Bootstrap support for H3GNL8 as seed ortholog is 100%.

Group of orthologs #433. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:320 P.ramorum:320

Q759H9              	100.00%		H3G7F6              	100.00%
Bootstrap support for Q759H9 as seed ortholog is 100%.
Bootstrap support for H3G7F6 as seed ortholog is 100%.

Group of orthologs #434. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:320 P.ramorum:320

Q757W9              	100.00%		H3H0X1              	100.00%
Bootstrap support for Q757W9 as seed ortholog is 100%.
Bootstrap support for H3H0X1 as seed ortholog is 100%.

Group of orthologs #435. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 P.ramorum:181

Q75EJ5              	100.00%		H3GAL4              	100.00%
Q757I1              	82.53%		H3H1V1              	75.35%
Q75DQ0              	47.85%		H3G6U0              	35.50%
Bootstrap support for Q75EJ5 as seed ortholog is 100%.
Bootstrap support for H3GAL4 as seed ortholog is 100%.

Group of orthologs #436. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:318 P.ramorum:108

Q750V0              	100.00%		H3GFM6              	100.00%
Q750Z5              	12.75%		H3GFM9              	99.69%
                    	       		H3H5N6              	31.58%
                    	       		H3GFK3              	30.42%
                    	       		H3GVJ9              	24.15%
                    	       		H3GVJ0              	22.60%
                    	       		H3H1N5              	21.75%
                    	       		H3GVI1              	17.49%
                    	       		H3GVI2              	14.63%
                    	       		H3GHA9              	11.22%
Bootstrap support for Q750V0 as seed ortholog is 100%.
Bootstrap support for H3GFM6 as seed ortholog is 97%.

Group of orthologs #437. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:318 P.ramorum:318

Q759C6              	100.00%		H3G8K5              	100.00%
Bootstrap support for Q759C6 as seed ortholog is 100%.
Bootstrap support for H3G8K5 as seed ortholog is 100%.

Group of orthologs #438. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:318 P.ramorum:155

Q75C90              	100.00%		H3G9Y7              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for H3G9Y7 as seed ortholog is 100%.

Group of orthologs #439. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:38 P.ramorum:317

Q759X1              	100.00%		H3GAF9              	100.00%
Bootstrap support for Q759X1 as seed ortholog is 82%.
Bootstrap support for H3GAF9 as seed ortholog is 100%.

Group of orthologs #440. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 P.ramorum:263

Q75CE4              	100.00%		H3GKY3              	100.00%
Bootstrap support for Q75CE4 as seed ortholog is 100%.
Bootstrap support for H3GKY3 as seed ortholog is 61%.
Alternative seed ortholog is H3GGG5 (263 bits away from this cluster)

Group of orthologs #441. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 P.ramorum:317

Q75DK8              	100.00%		H3GYJ5              	100.00%
Bootstrap support for Q75DK8 as seed ortholog is 100%.
Bootstrap support for H3GYJ5 as seed ortholog is 100%.

Group of orthologs #442. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 P.ramorum:229

Q759G5              	100.00%		H3GAJ0              	100.00%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for H3GAJ0 as seed ortholog is 100%.

Group of orthologs #443. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 P.ramorum:316

Q756J5              	100.00%		H3GH31              	100.00%
Bootstrap support for Q756J5 as seed ortholog is 100%.
Bootstrap support for H3GH31 as seed ortholog is 100%.

Group of orthologs #444. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 P.ramorum:315

Q753P1              	100.00%		H3G8T1              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for H3G8T1 as seed ortholog is 100%.

Group of orthologs #445. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 P.ramorum:315

Q758F8              	100.00%		H3G8T3              	100.00%
Bootstrap support for Q758F8 as seed ortholog is 100%.
Bootstrap support for H3G8T3 as seed ortholog is 100%.

Group of orthologs #446. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.ramorum:27

Q755B5              	100.00%		H3G992              	100.00%
Q758E1              	50.88%		
Bootstrap support for Q755B5 as seed ortholog is 99%.
Bootstrap support for H3G992 as seed ortholog is 80%.

Group of orthologs #447. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:314

Q75BY4              	100.00%		H3GXW5              	100.00%
                    	       		H3GXX2              	11.90%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for H3GXW5 as seed ortholog is 100%.

Group of orthologs #448. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:158

Q756A3              	100.00%		H3G9C6              	100.00%
Bootstrap support for Q756A3 as seed ortholog is 100%.
Bootstrap support for H3G9C6 as seed ortholog is 99%.

Group of orthologs #449. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:314

Q759J2              	100.00%		H3G8W6              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for H3G8W6 as seed ortholog is 100%.

Group of orthologs #450. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:314 P.ramorum:314

Q756Z9              	100.00%		H3GEE0              	100.00%
Bootstrap support for Q756Z9 as seed ortholog is 100%.
Bootstrap support for H3GEE0 as seed ortholog is 100%.

Group of orthologs #451. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.ramorum:178

Q754J2              	100.00%		H3GMA5              	100.00%
Bootstrap support for Q754J2 as seed ortholog is 99%.
Bootstrap support for H3GMA5 as seed ortholog is 99%.

Group of orthologs #452. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:312 P.ramorum:312

Q75AJ9              	100.00%		H3G851              	100.00%
                    	       		H3GBH1              	53.18%
Bootstrap support for Q75AJ9 as seed ortholog is 100%.
Bootstrap support for H3G851 as seed ortholog is 100%.

Group of orthologs #453. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.ramorum:106

Q75EF7              	100.00%		H3G9Q7              	100.00%
Bootstrap support for Q75EF7 as seed ortholog is 100%.
Bootstrap support for H3G9Q7 as seed ortholog is 99%.

Group of orthologs #454. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:312 P.ramorum:147

Q753K8              	100.00%		H3HAS3              	100.00%
Bootstrap support for Q753K8 as seed ortholog is 100%.
Bootstrap support for H3HAS3 as seed ortholog is 99%.

Group of orthologs #455. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:168

Q757I6              	100.00%		H3GG09              	100.00%
Bootstrap support for Q757I6 as seed ortholog is 98%.
Bootstrap support for H3GG09 as seed ortholog is 99%.

Group of orthologs #456. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 P.ramorum:311

Q754W9              	100.00%		H3H4C8              	100.00%
Bootstrap support for Q754W9 as seed ortholog is 100%.
Bootstrap support for H3H4C8 as seed ortholog is 100%.

Group of orthologs #457. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 P.ramorum:124

Q751M5              	100.00%		H3GL38              	100.00%
Q757J1              	100.00%		H3G907              	100.00%
                    	       		H3GL37              	66.80%
                    	       		H3GL36              	25.17%
                    	       		H3GL33              	23.69%
                    	       		H3GL34              	20.48%
Bootstrap support for Q751M5 as seed ortholog is 100%.
Bootstrap support for Q757J1 as seed ortholog is 100%.
Bootstrap support for H3GL38 as seed ortholog is 99%.
Bootstrap support for H3G907 as seed ortholog is 99%.

Group of orthologs #458. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 P.ramorum:310

Q755P9              	100.00%		H3G6G3              	100.00%
                    	       		H3G7P1              	16.70%
Bootstrap support for Q755P9 as seed ortholog is 100%.
Bootstrap support for H3G6G3 as seed ortholog is 100%.

Group of orthologs #459. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 P.ramorum:147

Q753X4              	100.00%		H3HCI0              	100.00%
Bootstrap support for Q753X4 as seed ortholog is 100%.
Bootstrap support for H3HCI0 as seed ortholog is 99%.

Group of orthologs #460. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 P.ramorum:309

Q74ZC7              	100.00%		H3G9X1              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for H3G9X1 as seed ortholog is 100%.

Group of orthologs #461. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 P.ramorum:309

Q75C13              	100.00%		H3G8C3              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for H3G8C3 as seed ortholog is 100%.

Group of orthologs #462. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.ramorum:221

Q75ET3              	100.00%		H3GAF7              	100.00%
Bootstrap support for Q75ET3 as seed ortholog is 100%.
Bootstrap support for H3GAF7 as seed ortholog is 100%.

Group of orthologs #463. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 P.ramorum:252

Q75A46              	100.00%		H3H2P4              	100.00%
Bootstrap support for Q75A46 as seed ortholog is 100%.
Bootstrap support for H3H2P4 as seed ortholog is 100%.

Group of orthologs #464. Best score 308 bits
Score difference with first non-orthologous sequence - A.gossypii:308 P.ramorum:50

Q750G1              	100.00%		H3H542              	100.00%
                    	       		H3H433              	43.47%
                    	       		H3GZW0              	30.04%
                    	       		H3HA38              	9.70%
Bootstrap support for Q750G1 as seed ortholog is 100%.
Bootstrap support for H3H542 as seed ortholog is 81%.

Group of orthologs #465. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 P.ramorum:307

Q756Y3              	100.00%		H3G898              	100.00%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for H3G898 as seed ortholog is 100%.

Group of orthologs #466. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 P.ramorum:307

Q754D7              	100.00%		H3GLL2              	100.00%
Bootstrap support for Q754D7 as seed ortholog is 100%.
Bootstrap support for H3GLL2 as seed ortholog is 100%.

Group of orthologs #467. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.ramorum:179

Q753G9              	100.00%		H3G7Y2              	100.00%
                    	       		H3HDZ1              	63.86%
                    	       		H3G7Y1              	56.66%
Bootstrap support for Q753G9 as seed ortholog is 99%.
Bootstrap support for H3G7Y2 as seed ortholog is 99%.

Group of orthologs #468. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:306 P.ramorum:306

Q751D8              	100.00%		H3HB33              	100.00%
Bootstrap support for Q751D8 as seed ortholog is 100%.
Bootstrap support for H3HB33 as seed ortholog is 100%.

Group of orthologs #469. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 P.ramorum:305

Q750Z7              	100.00%		H3G4X8              	100.00%
Bootstrap support for Q750Z7 as seed ortholog is 100%.
Bootstrap support for H3G4X8 as seed ortholog is 100%.

Group of orthologs #470. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 P.ramorum:305

Q754D2              	100.00%		H3G5Z6              	100.00%
Bootstrap support for Q754D2 as seed ortholog is 100%.
Bootstrap support for H3G5Z6 as seed ortholog is 100%.

Group of orthologs #471. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 P.ramorum:186

Q75AV4              	100.00%		H3GU25              	100.00%
Bootstrap support for Q75AV4 as seed ortholog is 100%.
Bootstrap support for H3GU25 as seed ortholog is 100%.

Group of orthologs #472. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 P.ramorum:305

Q758T9              	100.00%		H3HCN8              	100.00%
Bootstrap support for Q758T9 as seed ortholog is 100%.
Bootstrap support for H3HCN8 as seed ortholog is 100%.

Group of orthologs #473. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 P.ramorum:304

Q752Z5              	100.00%		H3HC28              	100.00%
                    	       		H3GLI1              	65.69%
Bootstrap support for Q752Z5 as seed ortholog is 100%.
Bootstrap support for H3HC28 as seed ortholog is 100%.

Group of orthologs #474. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 P.ramorum:304

Q754H5              	100.00%		H3GA20              	100.00%
Bootstrap support for Q754H5 as seed ortholog is 100%.
Bootstrap support for H3GA20 as seed ortholog is 100%.

Group of orthologs #475. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 P.ramorum:304

Q756X5              	100.00%		H3G972              	100.00%
Bootstrap support for Q756X5 as seed ortholog is 100%.
Bootstrap support for H3G972 as seed ortholog is 100%.

Group of orthologs #476. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:257 P.ramorum:239

Q75DR0              	100.00%		H3GIL8              	100.00%
Bootstrap support for Q75DR0 as seed ortholog is 100%.
Bootstrap support for H3GIL8 as seed ortholog is 100%.

Group of orthologs #477. Best score 303 bits
Score difference with first non-orthologous sequence - A.gossypii:125 P.ramorum:137

Q750F8              	100.00%		H3G5E4              	100.00%
                    	       		H3G6J2              	100.00%
Bootstrap support for Q750F8 as seed ortholog is 99%.
Bootstrap support for H3G5E4 as seed ortholog is 99%.
Bootstrap support for H3G6J2 as seed ortholog is 99%.

Group of orthologs #478. Best score 303 bits
Score difference with first non-orthologous sequence - A.gossypii:303 P.ramorum:149

Q756J7              	100.00%		H3GWS1              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for H3GWS1 as seed ortholog is 99%.

Group of orthologs #479. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.ramorum:95

Q75A26              	100.00%		H3G8L3              	100.00%
                    	       		H3G8L2              	97.14%
Bootstrap support for Q75A26 as seed ortholog is 100%.
Bootstrap support for H3G8L3 as seed ortholog is 100%.

Group of orthologs #480. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:300 P.ramorum:300

Q75CR2              	100.00%		H3GCA4              	100.00%
Bootstrap support for Q75CR2 as seed ortholog is 100%.
Bootstrap support for H3GCA4 as seed ortholog is 100%.

Group of orthologs #481. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:192

Q75D87              	100.00%		H3HD43              	100.00%
Bootstrap support for Q75D87 as seed ortholog is 95%.
Bootstrap support for H3HD43 as seed ortholog is 100%.

Group of orthologs #482. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 P.ramorum:299

Q75AR1              	100.00%		H3G5G9              	100.00%
Bootstrap support for Q75AR1 as seed ortholog is 100%.
Bootstrap support for H3G5G9 as seed ortholog is 100%.

Group of orthologs #483. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 P.ramorum:299

Q74ZT0              	100.00%		H3GRM8              	100.00%
Bootstrap support for Q74ZT0 as seed ortholog is 100%.
Bootstrap support for H3GRM8 as seed ortholog is 100%.

Group of orthologs #484. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:59

Q75B14              	100.00%		H3H2X6              	100.00%
Bootstrap support for Q75B14 as seed ortholog is 99%.
Bootstrap support for H3H2X6 as seed ortholog is 90%.

Group of orthologs #485. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 P.ramorum:202

Q759L2              	100.00%		H3GAG1              	100.00%
Bootstrap support for Q759L2 as seed ortholog is 100%.
Bootstrap support for H3GAG1 as seed ortholog is 99%.

Group of orthologs #486. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.ramorum:117

Q75BH1              	100.00%		H3G9Y3              	100.00%
Bootstrap support for Q75BH1 as seed ortholog is 99%.
Bootstrap support for H3G9Y3 as seed ortholog is 99%.

Group of orthologs #487. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 P.ramorum:71

Q756A9              	100.00%		H3GPX7              	100.00%
Bootstrap support for Q756A9 as seed ortholog is 100%.
Bootstrap support for H3GPX7 as seed ortholog is 90%.

Group of orthologs #488. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:297 P.ramorum:297

Q759I8              	100.00%		H3GS72              	100.00%
Q752E8              	24.28%		
Bootstrap support for Q759I8 as seed ortholog is 100%.
Bootstrap support for H3GS72 as seed ortholog is 100%.

Group of orthologs #489. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:297 P.ramorum:297

Q754E7              	100.00%		H3GB03              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for H3GB03 as seed ortholog is 100%.

Group of orthologs #490. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:187

Q74ZW3              	100.00%		H3GIT1              	100.00%
Bootstrap support for Q74ZW3 as seed ortholog is 99%.
Bootstrap support for H3GIT1 as seed ortholog is 99%.

Group of orthologs #491. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:297 P.ramorum:297

Q750K5              	100.00%		H3HBC2              	100.00%
Bootstrap support for Q750K5 as seed ortholog is 100%.
Bootstrap support for H3HBC2 as seed ortholog is 100%.

Group of orthologs #492. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 P.ramorum:94

Q752A9              	100.00%		H3H1K4              	100.00%
Bootstrap support for Q752A9 as seed ortholog is 100%.
Bootstrap support for H3H1K4 as seed ortholog is 99%.

Group of orthologs #493. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.ramorum:296

Q75BY2              	100.00%		H3HBV1              	100.00%
Bootstrap support for Q75BY2 as seed ortholog is 99%.
Bootstrap support for H3HBV1 as seed ortholog is 100%.

Group of orthologs #494. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:222

Q759W9              	100.00%		H3GA02              	100.00%
Bootstrap support for Q759W9 as seed ortholog is 96%.
Bootstrap support for H3GA02 as seed ortholog is 100%.

Group of orthologs #495. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 P.ramorum:295

Q75D84              	100.00%		H3G7N7              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for H3G7N7 as seed ortholog is 100%.

Group of orthologs #496. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 P.ramorum:295

Q74ZY3              	100.00%		H3GLH2              	100.00%
Bootstrap support for Q74ZY3 as seed ortholog is 100%.
Bootstrap support for H3GLH2 as seed ortholog is 100%.

Group of orthologs #497. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:295 P.ramorum:295

Q750R2              	100.00%		H3GSD7              	100.00%
Bootstrap support for Q750R2 as seed ortholog is 100%.
Bootstrap support for H3GSD7 as seed ortholog is 100%.

Group of orthologs #498. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 P.ramorum:217

Q757C6              	100.00%		H3G760              	100.00%
                    	       		H3G989              	8.54%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for H3G760 as seed ortholog is 100%.

Group of orthologs #499. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.ramorum:293

Q75CE2              	100.00%		H3G7R9              	100.00%
                    	       		H3GA94              	68.99%
Bootstrap support for Q75CE2 as seed ortholog is 80%.
Bootstrap support for H3G7R9 as seed ortholog is 100%.

Group of orthologs #500. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:293 P.ramorum:293

Q75B26              	100.00%		H3G5B2              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for H3G5B2 as seed ortholog is 100%.

Group of orthologs #501. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.ramorum:292

Q75A55              	100.00%		H3G6T5              	100.00%
Bootstrap support for Q75A55 as seed ortholog is 99%.
Bootstrap support for H3G6T5 as seed ortholog is 100%.

Group of orthologs #502. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:292 P.ramorum:106

Q755S7              	100.00%		H3GMH7              	100.00%
Bootstrap support for Q755S7 as seed ortholog is 100%.
Bootstrap support for H3GMH7 as seed ortholog is 99%.

Group of orthologs #503. Best score 291 bits
Score difference with first non-orthologous sequence - A.gossypii:291 P.ramorum:191

Q750P3              	100.00%		H3GYT1              	100.00%
Bootstrap support for Q750P3 as seed ortholog is 100%.
Bootstrap support for H3GYT1 as seed ortholog is 99%.

Group of orthologs #504. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:184 P.ramorum:77

Q75AW1              	100.00%		H3H5P9              	100.00%
                    	       		H3H820              	34.78%
Bootstrap support for Q75AW1 as seed ortholog is 99%.
Bootstrap support for H3H5P9 as seed ortholog is 96%.

Group of orthologs #505. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 P.ramorum:290

Q753A2              	100.00%		H3G5M2              	100.00%
Bootstrap support for Q753A2 as seed ortholog is 100%.
Bootstrap support for H3G5M2 as seed ortholog is 100%.

Group of orthologs #506. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 P.ramorum:290

Q759R5              	100.00%		H3G7D8              	100.00%
Bootstrap support for Q759R5 as seed ortholog is 100%.
Bootstrap support for H3G7D8 as seed ortholog is 100%.

Group of orthologs #507. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 P.ramorum:290

Q753M6              	100.00%		H3H197              	100.00%
Bootstrap support for Q753M6 as seed ortholog is 100%.
Bootstrap support for H3H197 as seed ortholog is 100%.

Group of orthologs #508. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 P.ramorum:289

Q75EA0              	100.00%		H3G949              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for H3G949 as seed ortholog is 100%.

Group of orthologs #509. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.ramorum:289

Q758V2              	100.00%		H3HCD9              	100.00%
Bootstrap support for Q758V2 as seed ortholog is 100%.
Bootstrap support for H3HCD9 as seed ortholog is 100%.

Group of orthologs #510. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:29 P.ramorum:139

Q75A66              	100.00%		H3GRK5              	100.00%
                    	       		H3G6L5              	53.82%
                    	       		H3G8A1              	45.99%
                    	       		H3GRK8              	35.63%
                    	       		H3GRN4              	35.53%
                    	       		H3GRL0              	25.82%
                    	       		H3G8Z4              	9.99%
Bootstrap support for Q75A66 as seed ortholog is 73%.
Alternative seed ortholog is Q75DN5 (29 bits away from this cluster)
Bootstrap support for H3GRK5 as seed ortholog is 99%.

Group of orthologs #511. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 P.ramorum:287

Q756W2              	100.00%		H3G9I5              	100.00%
Bootstrap support for Q756W2 as seed ortholog is 100%.
Bootstrap support for H3G9I5 as seed ortholog is 100%.

Group of orthologs #512. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 P.ramorum:287

Q75D31              	100.00%		H3H2J7              	100.00%
Bootstrap support for Q75D31 as seed ortholog is 100%.
Bootstrap support for H3H2J7 as seed ortholog is 100%.

Group of orthologs #513. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.ramorum:286

Q75AA7              	100.00%		H3G6N5              	100.00%
Bootstrap support for Q75AA7 as seed ortholog is 100%.
Bootstrap support for H3G6N5 as seed ortholog is 100%.

Group of orthologs #514. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.ramorum:286

Q75CY6              	100.00%		H3G9I2              	100.00%
Bootstrap support for Q75CY6 as seed ortholog is 100%.
Bootstrap support for H3G9I2 as seed ortholog is 100%.

Group of orthologs #515. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.ramorum:286

Q759G6              	100.00%		H3GKJ4              	100.00%
Bootstrap support for Q759G6 as seed ortholog is 100%.
Bootstrap support for H3GKJ4 as seed ortholog is 100%.

Group of orthologs #516. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 P.ramorum:209

Q75D71              	100.00%		H3G7G1              	100.00%
Bootstrap support for Q75D71 as seed ortholog is 100%.
Bootstrap support for H3G7G1 as seed ortholog is 99%.

Group of orthologs #517. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 P.ramorum:284

Q754B9              	100.00%		H3G6G2              	100.00%
                    	       		H3GB26              	100.00%
Bootstrap support for Q754B9 as seed ortholog is 100%.
Bootstrap support for H3G6G2 as seed ortholog is 100%.
Bootstrap support for H3GB26 as seed ortholog is 100%.

Group of orthologs #518. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:42

Q755C4              	100.00%		H3GAB6              	100.00%
Bootstrap support for Q755C4 as seed ortholog is 100%.
Bootstrap support for H3GAB6 as seed ortholog is 90%.

Group of orthologs #519. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:284 P.ramorum:284

Q75BA7              	100.00%		H3GAD3              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for H3GAD3 as seed ortholog is 100%.

Group of orthologs #520. Best score 283 bits
Score difference with first non-orthologous sequence - A.gossypii:283 P.ramorum:217

Q75BS2              	100.00%		H3GAW1              	100.00%
                    	       		H3GJ37              	8.42%
Bootstrap support for Q75BS2 as seed ortholog is 100%.
Bootstrap support for H3GAW1 as seed ortholog is 100%.

Group of orthologs #521. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.ramorum:282

Q753V8              	100.00%		H3G980              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for H3G980 as seed ortholog is 100%.

Group of orthologs #522. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.ramorum:282

Q75CU7              	100.00%		H3G993              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for H3G993 as seed ortholog is 100%.

Group of orthologs #523. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.ramorum:282

Q75DX3              	100.00%		H3GKT1              	100.00%
Bootstrap support for Q75DX3 as seed ortholog is 100%.
Bootstrap support for H3GKT1 as seed ortholog is 100%.

Group of orthologs #524. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.ramorum:282

Q752D9              	100.00%		H3GXW6              	100.00%
Bootstrap support for Q752D9 as seed ortholog is 100%.
Bootstrap support for H3GXW6 as seed ortholog is 100%.

Group of orthologs #525. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.ramorum:282

Q75EB1              	100.00%		H3GTK3              	100.00%
Bootstrap support for Q75EB1 as seed ortholog is 100%.
Bootstrap support for H3GTK3 as seed ortholog is 100%.

Group of orthologs #526. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:213

Q75C99              	100.00%		H3G6T4              	100.00%
                    	       		H3GQ77              	60.99%
Bootstrap support for Q75C99 as seed ortholog is 99%.
Bootstrap support for H3G6T4 as seed ortholog is 100%.

Group of orthologs #527. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 P.ramorum:281

Q750D0              	100.00%		H3GA06              	100.00%
Bootstrap support for Q750D0 as seed ortholog is 100%.
Bootstrap support for H3GA06 as seed ortholog is 100%.

Group of orthologs #528. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:280

Q757R6              	100.00%		H3HDW5              	100.00%
                    	       		H3G8N3              	19.32%
Bootstrap support for Q757R6 as seed ortholog is 98%.
Bootstrap support for H3HDW5 as seed ortholog is 100%.

Group of orthologs #529. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 P.ramorum:280

Q75BI7              	100.00%		H3H115              	100.00%
Bootstrap support for Q75BI7 as seed ortholog is 100%.
Bootstrap support for H3H115 as seed ortholog is 100%.

Group of orthologs #530. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:74

Q756U5              	100.00%		H3H2B8              	100.00%
                    	       		H3H2C1              	47.22%
                    	       		H3H2C0              	27.24%
                    	       		H3GGN6              	25.04%
                    	       		H3GGN3              	23.91%
                    	       		H3H2B7              	23.91%
                    	       		H3GBG4              	22.94%
Bootstrap support for Q756U5 as seed ortholog is 99%.
Bootstrap support for H3H2B8 as seed ortholog is 91%.

Group of orthologs #531. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.ramorum:279

Q750H0              	100.00%		H3G632              	100.00%
Bootstrap support for Q750H0 as seed ortholog is 100%.
Bootstrap support for H3G632 as seed ortholog is 100%.

Group of orthologs #532. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.ramorum:34

Q75D02              	100.00%		H3G8X5              	100.00%
Bootstrap support for Q75D02 as seed ortholog is 100%.
Bootstrap support for H3G8X5 as seed ortholog is 88%.

Group of orthologs #533. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.ramorum:279

Q75D08              	100.00%		H3GHB8              	100.00%
Bootstrap support for Q75D08 as seed ortholog is 100%.
Bootstrap support for H3GHB8 as seed ortholog is 100%.

Group of orthologs #534. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.ramorum:279

Q757G2              	100.00%		H3GNQ3              	100.00%
Bootstrap support for Q757G2 as seed ortholog is 100%.
Bootstrap support for H3GNQ3 as seed ortholog is 100%.

Group of orthologs #535. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.ramorum:203

Q756J9              	100.00%		H3GUK7              	100.00%
Bootstrap support for Q756J9 as seed ortholog is 100%.
Bootstrap support for H3GUK7 as seed ortholog is 100%.

Group of orthologs #536. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.ramorum:279

Q751E6              	100.00%		H3H1H3              	100.00%
Bootstrap support for Q751E6 as seed ortholog is 100%.
Bootstrap support for H3H1H3 as seed ortholog is 100%.

Group of orthologs #537. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.ramorum:279

Q752U0              	100.00%		H3H2G5              	100.00%
Bootstrap support for Q752U0 as seed ortholog is 100%.
Bootstrap support for H3H2G5 as seed ortholog is 100%.

Group of orthologs #538. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:278 P.ramorum:278

Q754S9              	100.00%		H3GCB9              	100.00%
Bootstrap support for Q754S9 as seed ortholog is 100%.
Bootstrap support for H3GCB9 as seed ortholog is 100%.

Group of orthologs #539. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.ramorum:96

Q756J1              	100.00%		H3G853              	100.00%
Bootstrap support for Q756J1 as seed ortholog is 99%.
Bootstrap support for H3G853 as seed ortholog is 97%.

Group of orthologs #540. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 P.ramorum:277

Q75DT8              	100.00%		H3GEW8              	100.00%
Bootstrap support for Q75DT8 as seed ortholog is 100%.
Bootstrap support for H3GEW8 as seed ortholog is 100%.

Group of orthologs #541. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.ramorum:276

Q756H0              	100.00%		H3G8K1              	100.00%
Bootstrap support for Q756H0 as seed ortholog is 100%.
Bootstrap support for H3G8K1 as seed ortholog is 100%.

Group of orthologs #542. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:276

Q75CH8              	100.00%		H3G7H2              	100.00%
Bootstrap support for Q75CH8 as seed ortholog is 99%.
Bootstrap support for H3G7H2 as seed ortholog is 100%.

Group of orthologs #543. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.ramorum:276

Q751K4              	100.00%		H3GVK0              	100.00%
Bootstrap support for Q751K4 as seed ortholog is 100%.
Bootstrap support for H3GVK0 as seed ortholog is 100%.

Group of orthologs #544. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.ramorum:276

Q75BB3              	100.00%		H3H7P1              	100.00%
Bootstrap support for Q75BB3 as seed ortholog is 100%.
Bootstrap support for H3H7P1 as seed ortholog is 100%.

Group of orthologs #545. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:275 P.ramorum:275

Q756E4              	100.00%		H3GCH7              	100.00%
                    	       		H3G888              	72.58%
                    	       		H3GCH8              	39.30%
Bootstrap support for Q756E4 as seed ortholog is 100%.
Bootstrap support for H3GCH7 as seed ortholog is 100%.

Group of orthologs #546. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 P.ramorum:274

Q75CE1              	100.00%		H3GAQ0              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for H3GAQ0 as seed ortholog is 100%.

Group of orthologs #547. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.ramorum:273

Q753J4              	100.00%		H3GAD9              	100.00%
Bootstrap support for Q753J4 as seed ortholog is 100%.
Bootstrap support for H3GAD9 as seed ortholog is 100%.

Group of orthologs #548. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.ramorum:273

Q75E55              	100.00%		H3G9H9              	100.00%
Bootstrap support for Q75E55 as seed ortholog is 100%.
Bootstrap support for H3G9H9 as seed ortholog is 100%.

Group of orthologs #549. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.ramorum:273

Q75ER7              	100.00%		H3GBZ7              	100.00%
Bootstrap support for Q75ER7 as seed ortholog is 100%.
Bootstrap support for H3GBZ7 as seed ortholog is 100%.

Group of orthologs #550. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.ramorum:273

Q75BQ3              	100.00%		H3GQV1              	100.00%
Bootstrap support for Q75BQ3 as seed ortholog is 100%.
Bootstrap support for H3GQV1 as seed ortholog is 100%.

Group of orthologs #551. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.ramorum:272

Q754W1              	100.00%		H3G854              	100.00%
Bootstrap support for Q754W1 as seed ortholog is 100%.
Bootstrap support for H3G854 as seed ortholog is 100%.

Group of orthologs #552. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.ramorum:67

Q75DL9              	100.00%		H3GHC6              	100.00%
Bootstrap support for Q75DL9 as seed ortholog is 100%.
Bootstrap support for H3GHC6 as seed ortholog is 93%.

Group of orthologs #553. Best score 271 bits
Score difference with first non-orthologous sequence - A.gossypii:271 P.ramorum:271

Q753J9              	100.00%		H3G994              	100.00%
Bootstrap support for Q753J9 as seed ortholog is 100%.
Bootstrap support for H3G994 as seed ortholog is 100%.

Group of orthologs #554. Best score 271 bits
Score difference with first non-orthologous sequence - A.gossypii:271 P.ramorum:271

Q75ER1              	100.00%		H3GLH5              	100.00%
Bootstrap support for Q75ER1 as seed ortholog is 100%.
Bootstrap support for H3GLH5 as seed ortholog is 100%.

Group of orthologs #555. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 P.ramorum:270

Q74ZK3              	100.00%		H3G4X4              	100.00%
Bootstrap support for Q74ZK3 as seed ortholog is 100%.
Bootstrap support for H3G4X4 as seed ortholog is 100%.

Group of orthologs #556. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 P.ramorum:270

Q75DG3              	100.00%		H3G805              	100.00%
Bootstrap support for Q75DG3 as seed ortholog is 100%.
Bootstrap support for H3G805 as seed ortholog is 100%.

Group of orthologs #557. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 P.ramorum:270

Q75CY7              	100.00%		H3G927              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for H3G927 as seed ortholog is 100%.

Group of orthologs #558. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 P.ramorum:188

Q75F44              	100.00%		H3G7T3              	100.00%
Bootstrap support for Q75F44 as seed ortholog is 100%.
Bootstrap support for H3G7T3 as seed ortholog is 100%.

Group of orthologs #559. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 P.ramorum:215

Q754H4              	100.00%		H3HCG4              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for H3HCG4 as seed ortholog is 100%.

Group of orthologs #560. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 P.ramorum:270

Q75AK8              	100.00%		H3HBM0              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for H3HBM0 as seed ortholog is 100%.

Group of orthologs #561. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 P.ramorum:269

Q75F49              	100.00%		H3G950              	100.00%
Bootstrap support for Q75F49 as seed ortholog is 100%.
Bootstrap support for H3G950 as seed ortholog is 100%.

Group of orthologs #562. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 P.ramorum:269

Q75DQ3              	100.00%		H3GD17              	100.00%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for H3GD17 as seed ortholog is 100%.

Group of orthologs #563. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:268 P.ramorum:268

Q75B75              	100.00%		H3GAJ2              	100.00%
Bootstrap support for Q75B75 as seed ortholog is 100%.
Bootstrap support for H3GAJ2 as seed ortholog is 100%.

Group of orthologs #564. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:268 P.ramorum:268

Q75AX9              	100.00%		H3H1H9              	100.00%
Bootstrap support for Q75AX9 as seed ortholog is 100%.
Bootstrap support for H3H1H9 as seed ortholog is 100%.

Group of orthologs #565. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.ramorum:267

Q755T8              	100.00%		H3G884              	100.00%
Bootstrap support for Q755T8 as seed ortholog is 100%.
Bootstrap support for H3G884 as seed ortholog is 100%.

Group of orthologs #566. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.ramorum:267

Q75E11              	100.00%		H3G9T2              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for H3G9T2 as seed ortholog is 100%.

Group of orthologs #567. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.ramorum:267

Q75EF0              	100.00%		H3G9H3              	100.00%
Bootstrap support for Q75EF0 as seed ortholog is 100%.
Bootstrap support for H3G9H3 as seed ortholog is 100%.

Group of orthologs #568. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.ramorum:267

Q75AI9              	100.00%		H3GNK8              	100.00%
Bootstrap support for Q75AI9 as seed ortholog is 100%.
Bootstrap support for H3GNK8 as seed ortholog is 100%.

Group of orthologs #569. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 P.ramorum:266

Q75D52              	100.00%		H3GAN3              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for H3GAN3 as seed ortholog is 100%.

Group of orthologs #570. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:48

Q750C1              	100.00%		H3GT84              	100.00%
Bootstrap support for Q750C1 as seed ortholog is 100%.
Bootstrap support for H3GT84 as seed ortholog is 93%.

Group of orthologs #571. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:195

Q9HF56              	100.00%		H3GB56              	100.00%
                    	       		H3GAE8              	88.97%
Bootstrap support for Q9HF56 as seed ortholog is 99%.
Bootstrap support for H3GB56 as seed ortholog is 100%.

Group of orthologs #572. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 P.ramorum:264

Q74Z31              	100.00%		H3G699              	100.00%
Bootstrap support for Q74Z31 as seed ortholog is 100%.
Bootstrap support for H3G699 as seed ortholog is 100%.

Group of orthologs #573. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 P.ramorum:264

Q753C6              	100.00%		H3G8F2              	100.00%
Bootstrap support for Q753C6 as seed ortholog is 100%.
Bootstrap support for H3G8F2 as seed ortholog is 100%.

Group of orthologs #574. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 P.ramorum:264

Q752I6              	100.00%		H3G9L1              	100.00%
Bootstrap support for Q752I6 as seed ortholog is 100%.
Bootstrap support for H3G9L1 as seed ortholog is 100%.

Group of orthologs #575. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 P.ramorum:264

Q758L6              	100.00%		H3G8V6              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 100%.
Bootstrap support for H3G8V6 as seed ortholog is 100%.

Group of orthologs #576. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:264

Q75BF4              	100.00%		H3G758              	100.00%
Bootstrap support for Q75BF4 as seed ortholog is 100%.
Bootstrap support for H3G758 as seed ortholog is 100%.

Group of orthologs #577. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:263 P.ramorum:263

Q756M1              	100.00%		H3GS12              	100.00%
Q756Y6              	10.79%		
Bootstrap support for Q756M1 as seed ortholog is 100%.
Bootstrap support for H3GS12 as seed ortholog is 100%.

Group of orthologs #578. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:132

Q756S0              	100.00%		H3G8S2              	100.00%
Bootstrap support for Q756S0 as seed ortholog is 99%.
Bootstrap support for H3G8S2 as seed ortholog is 99%.

Group of orthologs #579. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:78

Q759P4              	100.00%		H3GKT2              	100.00%
Bootstrap support for Q759P4 as seed ortholog is 96%.
Bootstrap support for H3GKT2 as seed ortholog is 95%.

Group of orthologs #580. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 P.ramorum:262

Q750M9              	100.00%		H3GAY7              	100.00%
                    	       		H3G9A7              	99.71%
                    	       		H3G8Q5              	69.52%
Bootstrap support for Q750M9 as seed ortholog is 100%.
Bootstrap support for H3GAY7 as seed ortholog is 100%.

Group of orthologs #581. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.ramorum:79

Q755T4              	100.00%		H3G8U7              	100.00%
Bootstrap support for Q755T4 as seed ortholog is 100%.
Bootstrap support for H3G8U7 as seed ortholog is 99%.

Group of orthologs #582. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 P.ramorum:262

Q75CI9              	100.00%		H3G5N0              	100.00%
Bootstrap support for Q75CI9 as seed ortholog is 100%.
Bootstrap support for H3G5N0 as seed ortholog is 100%.

Group of orthologs #583. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 P.ramorum:262

Q758H3              	100.00%		H3GTW5              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for H3GTW5 as seed ortholog is 100%.

Group of orthologs #584. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:261

Q755S1              	100.00%		H3HAU2              	100.00%
                    	       		H3HCH5              	9.03%
Bootstrap support for Q755S1 as seed ortholog is 99%.
Bootstrap support for H3HAU2 as seed ortholog is 100%.

Group of orthologs #585. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 P.ramorum:9

Q74ZE6              	100.00%		H3G710              	100.00%
Bootstrap support for Q74ZE6 as seed ortholog is 100%.
Bootstrap support for H3G710 as seed ortholog is 70%.
Alternative seed ortholog is H3GC21 (9 bits away from this cluster)

Group of orthologs #586. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 P.ramorum:199

Q75CU3              	100.00%		H3GAH0              	100.00%
Bootstrap support for Q75CU3 as seed ortholog is 100%.
Bootstrap support for H3GAH0 as seed ortholog is 99%.

Group of orthologs #587. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 P.ramorum:261

Q750V3              	100.00%		H3GML7              	100.00%
Bootstrap support for Q750V3 as seed ortholog is 100%.
Bootstrap support for H3GML7 as seed ortholog is 100%.

Group of orthologs #588. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 P.ramorum:261

Q750M3              	100.00%		H3GNT4              	100.00%
Bootstrap support for Q750M3 as seed ortholog is 100%.
Bootstrap support for H3GNT4 as seed ortholog is 100%.

Group of orthologs #589. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 P.ramorum:261

Q757J3              	100.00%		H3GSJ6              	100.00%
Bootstrap support for Q757J3 as seed ortholog is 100%.
Bootstrap support for H3GSJ6 as seed ortholog is 100%.

Group of orthologs #590. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.ramorum:261

Q75F47              	100.00%		H3GM26              	100.00%
Bootstrap support for Q75F47 as seed ortholog is 99%.
Bootstrap support for H3GM26 as seed ortholog is 100%.

Group of orthologs #591. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:205

Q756U4              	100.00%		H3H0M5              	100.00%
Bootstrap support for Q756U4 as seed ortholog is 99%.
Bootstrap support for H3H0M5 as seed ortholog is 100%.

Group of orthologs #592. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 P.ramorum:259

Q754N5              	100.00%		H3GCZ6              	100.00%
Q75EJ7              	10.97%		H3GCZ5              	76.18%
                    	       		H3GCZ7              	71.72%
                    	       		H3GCY7              	66.75%
                    	       		H3G6M1              	63.44%
Bootstrap support for Q754N5 as seed ortholog is 100%.
Bootstrap support for H3GCZ6 as seed ortholog is 100%.

Group of orthologs #593. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 P.ramorum:259

Q75CC4              	100.00%		H3G894              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for H3G894 as seed ortholog is 100%.

Group of orthologs #594. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 P.ramorum:259

Q75DR1              	100.00%		H3GA67              	100.00%
Bootstrap support for Q75DR1 as seed ortholog is 100%.
Bootstrap support for H3GA67 as seed ortholog is 100%.

Group of orthologs #595. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 P.ramorum:259

Q75A30              	100.00%		H3GVL6              	100.00%
Bootstrap support for Q75A30 as seed ortholog is 100%.
Bootstrap support for H3GVL6 as seed ortholog is 100%.

Group of orthologs #596. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:39

Q759X8              	100.00%		H3G5B5              	100.00%
                    	       		H3GZK5              	45.85%
                    	       		H3G7G7              	23.98%
Bootstrap support for Q759X8 as seed ortholog is 96%.
Bootstrap support for H3G5B5 as seed ortholog is 82%.

Group of orthologs #597. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:258 P.ramorum:258

Q755D9              	100.00%		H3GAM0              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for H3GAM0 as seed ortholog is 100%.

Group of orthologs #598. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:258 P.ramorum:258

Q75A87              	100.00%		H3GV90              	100.00%
Bootstrap support for Q75A87 as seed ortholog is 100%.
Bootstrap support for H3GV90 as seed ortholog is 100%.

Group of orthologs #599. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:257 P.ramorum:257

Q759D9              	100.00%		H3G601              	100.00%
Bootstrap support for Q759D9 as seed ortholog is 100%.
Bootstrap support for H3G601 as seed ortholog is 100%.

Group of orthologs #600. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:257 P.ramorum:257

Q758S4              	100.00%		H3H0F3              	100.00%
Bootstrap support for Q758S4 as seed ortholog is 100%.
Bootstrap support for H3H0F3 as seed ortholog is 100%.

Group of orthologs #601. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 P.ramorum:256

Q750Q9              	100.00%		H3G6M9              	100.00%
Bootstrap support for Q750Q9 as seed ortholog is 100%.
Bootstrap support for H3G6M9 as seed ortholog is 100%.

Group of orthologs #602. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 P.ramorum:138

Q753Q1              	100.00%		H3G6T6              	100.00%
Bootstrap support for Q753Q1 as seed ortholog is 100%.
Bootstrap support for H3G6T6 as seed ortholog is 99%.

Group of orthologs #603. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 P.ramorum:256

Q750G7              	100.00%		H3GFF0              	100.00%
Bootstrap support for Q750G7 as seed ortholog is 100%.
Bootstrap support for H3GFF0 as seed ortholog is 100%.

Group of orthologs #604. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 P.ramorum:173

Q751A8              	100.00%		H3G8T9              	100.00%
Bootstrap support for Q751A8 as seed ortholog is 100%.
Bootstrap support for H3G8T9 as seed ortholog is 100%.

Group of orthologs #605. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.ramorum:253

Q75AN1              	100.00%		H3H2U2              	100.00%
Q758K6              	10.78%		
Bootstrap support for Q75AN1 as seed ortholog is 100%.
Bootstrap support for H3H2U2 as seed ortholog is 100%.

Group of orthologs #606. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:83

Q751F5              	100.00%		H3G7M1              	100.00%
Bootstrap support for Q751F5 as seed ortholog is 95%.
Bootstrap support for H3G7M1 as seed ortholog is 91%.

Group of orthologs #607. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:110 P.ramorum:253

Q755U7              	100.00%		H3G7I0              	100.00%
Bootstrap support for Q755U7 as seed ortholog is 100%.
Bootstrap support for H3G7I0 as seed ortholog is 100%.

Group of orthologs #608. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.ramorum:253

Q75D16              	100.00%		H3G5C0              	100.00%
Bootstrap support for Q75D16 as seed ortholog is 100%.
Bootstrap support for H3G5C0 as seed ortholog is 100%.

Group of orthologs #609. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.ramorum:253

Q759T6              	100.00%		H3GCB7              	100.00%
Bootstrap support for Q759T6 as seed ortholog is 100%.
Bootstrap support for H3GCB7 as seed ortholog is 100%.

Group of orthologs #610. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:165

Q75C60              	100.00%		H3GA23              	100.00%
                    	       		H3GAD0              	41.50%
Bootstrap support for Q75C60 as seed ortholog is 99%.
Bootstrap support for H3GA23 as seed ortholog is 100%.

Group of orthologs #611. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.ramorum:56

Q751V1              	100.00%		H3G7Z1              	100.00%
Bootstrap support for Q751V1 as seed ortholog is 99%.
Bootstrap support for H3G7Z1 as seed ortholog is 94%.

Group of orthologs #612. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 P.ramorum:252

Q75BN8              	100.00%		H3GJ79              	100.00%
Bootstrap support for Q75BN8 as seed ortholog is 100%.
Bootstrap support for H3GJ79 as seed ortholog is 100%.

Group of orthologs #613. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 P.ramorum:252

Q759C8              	100.00%		H3HCF7              	100.00%
Bootstrap support for Q759C8 as seed ortholog is 100%.
Bootstrap support for H3HCF7 as seed ortholog is 100%.

Group of orthologs #614. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 P.ramorum:252

Q75CB2              	100.00%		H3HA42              	100.00%
Bootstrap support for Q75CB2 as seed ortholog is 100%.
Bootstrap support for H3HA42 as seed ortholog is 100%.

Group of orthologs #615. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.ramorum:251

Q750E7              	100.00%		H3GVB8              	100.00%
                    	       		H3G9X8              	69.36%
Bootstrap support for Q750E7 as seed ortholog is 100%.
Bootstrap support for H3GVB8 as seed ortholog is 100%.

Group of orthologs #616. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.ramorum:251

Q74ZQ3              	100.00%		H3G8C1              	100.00%
Bootstrap support for Q74ZQ3 as seed ortholog is 100%.
Bootstrap support for H3G8C1 as seed ortholog is 100%.

Group of orthologs #617. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.ramorum:182

Q759Q9              	100.00%		H3G7B7              	100.00%
Bootstrap support for Q759Q9 as seed ortholog is 100%.
Bootstrap support for H3G7B7 as seed ortholog is 100%.

Group of orthologs #618. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.ramorum:211

Q752X7              	100.00%		H3GWU9              	100.00%
Bootstrap support for Q752X7 as seed ortholog is 100%.
Bootstrap support for H3GWU9 as seed ortholog is 100%.

Group of orthologs #619. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.ramorum:250

Q750J7              	100.00%		H3G783              	100.00%
Bootstrap support for Q750J7 as seed ortholog is 100%.
Bootstrap support for H3G783 as seed ortholog is 100%.

Group of orthologs #620. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.ramorum:195

Q74ZK8              	100.00%		H3G8D5              	100.00%
Bootstrap support for Q74ZK8 as seed ortholog is 100%.
Bootstrap support for H3G8D5 as seed ortholog is 100%.

Group of orthologs #621. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.ramorum:250

Q754Z6              	100.00%		H3G7V7              	100.00%
Bootstrap support for Q754Z6 as seed ortholog is 100%.
Bootstrap support for H3G7V7 as seed ortholog is 100%.

Group of orthologs #622. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.ramorum:250

Q75BC1              	100.00%		H3G8G2              	100.00%
Bootstrap support for Q75BC1 as seed ortholog is 100%.
Bootstrap support for H3G8G2 as seed ortholog is 100%.

Group of orthologs #623. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.ramorum:200

Q75CV6              	100.00%		H3G890              	100.00%
Bootstrap support for Q75CV6 as seed ortholog is 100%.
Bootstrap support for H3G890 as seed ortholog is 100%.

Group of orthologs #624. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.ramorum:250

Q75D59              	100.00%		H3G9X4              	100.00%
Bootstrap support for Q75D59 as seed ortholog is 100%.
Bootstrap support for H3G9X4 as seed ortholog is 100%.

Group of orthologs #625. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q759L4              	100.00%		H3GV33              	100.00%
Q752X6              	20.39%		H3GV30              	68.73%
Bootstrap support for Q759L4 as seed ortholog is 100%.
Bootstrap support for H3GV33 as seed ortholog is 100%.

Group of orthologs #626. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q75C28              	100.00%		H3G561              	100.00%
Bootstrap support for Q75C28 as seed ortholog is 100%.
Bootstrap support for H3G561 as seed ortholog is 100%.

Group of orthologs #627. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q75DQ2              	100.00%		H3G8A9              	100.00%
Bootstrap support for Q75DQ2 as seed ortholog is 100%.
Bootstrap support for H3G8A9 as seed ortholog is 100%.

Group of orthologs #628. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q75EL3              	100.00%		H3G9Y2              	100.00%
Bootstrap support for Q75EL3 as seed ortholog is 100%.
Bootstrap support for H3G9Y2 as seed ortholog is 100%.

Group of orthologs #629. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q75DI9              	100.00%		H3GWM1              	100.00%
Bootstrap support for Q75DI9 as seed ortholog is 100%.
Bootstrap support for H3GWM1 as seed ortholog is 100%.

Group of orthologs #630. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q75DI3              	100.00%		H3GZ97              	100.00%
Bootstrap support for Q75DI3 as seed ortholog is 100%.
Bootstrap support for H3GZ97 as seed ortholog is 100%.

Group of orthologs #631. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.ramorum:249

Q759R0              	100.00%		H3HCX5              	100.00%
Bootstrap support for Q759R0 as seed ortholog is 100%.
Bootstrap support for H3HCX5 as seed ortholog is 100%.

Group of orthologs #632. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.ramorum:248

Q751K5              	100.00%		H3G6D9              	100.00%
Bootstrap support for Q751K5 as seed ortholog is 100%.
Bootstrap support for H3G6D9 as seed ortholog is 100%.

Group of orthologs #633. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.ramorum:248

Q754R0              	100.00%		H3GC34              	100.00%
Bootstrap support for Q754R0 as seed ortholog is 100%.
Bootstrap support for H3GC34 as seed ortholog is 100%.

Group of orthologs #634. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.ramorum:172

Q75D62              	100.00%		H3GAI3              	100.00%
Bootstrap support for Q75D62 as seed ortholog is 100%.
Bootstrap support for H3GAI3 as seed ortholog is 100%.

Group of orthologs #635. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.ramorum:248

Q75B99              	100.00%		H3GHW1              	100.00%
Bootstrap support for Q75B99 as seed ortholog is 100%.
Bootstrap support for H3GHW1 as seed ortholog is 100%.

Group of orthologs #636. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:247 P.ramorum:11

Q8J1G7              	100.00%		H3GZU5              	100.00%
                    	       		H3H6G7              	85.98%
Bootstrap support for Q8J1G7 as seed ortholog is 100%.
Bootstrap support for H3GZU5 as seed ortholog is 61%.
Alternative seed ortholog is H3GP94 (11 bits away from this cluster)

Group of orthologs #637. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.ramorum:99

Q755Y7              	100.00%		H3GUK6              	100.00%
Q75C65              	8.57%		H3GRM9              	6.46%
Bootstrap support for Q755Y7 as seed ortholog is 100%.
Bootstrap support for H3GUK6 as seed ortholog is 98%.

Group of orthologs #638. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.ramorum:86

Q74ZR4              	100.00%		H3G670              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for H3G670 as seed ortholog is 99%.

Group of orthologs #639. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:107

Q74ZL1              	100.00%		H3G9X0              	100.00%
Bootstrap support for Q74ZL1 as seed ortholog is 100%.
Bootstrap support for H3G9X0 as seed ortholog is 99%.

Group of orthologs #640. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.ramorum:246

Q75A48              	100.00%		H3GMY0              	100.00%
Bootstrap support for Q75A48 as seed ortholog is 100%.
Bootstrap support for H3GMY0 as seed ortholog is 100%.

Group of orthologs #641. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.ramorum:246

Q754Q0              	100.00%		H3GZ56              	100.00%
Bootstrap support for Q754Q0 as seed ortholog is 100%.
Bootstrap support for H3GZ56 as seed ortholog is 100%.

Group of orthologs #642. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.ramorum:246

Q757U6              	100.00%		H3HCZ5              	100.00%
Bootstrap support for Q757U6 as seed ortholog is 100%.
Bootstrap support for H3HCZ5 as seed ortholog is 100%.

Group of orthologs #643. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.ramorum:245

Q751P4              	100.00%		H3G6X3              	100.00%
                    	       		H3GAH5              	100.00%
Bootstrap support for Q751P4 as seed ortholog is 100%.
Bootstrap support for H3G6X3 as seed ortholog is 100%.
Bootstrap support for H3GAH5 as seed ortholog is 100%.

Group of orthologs #644. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.ramorum:245

Q757W4              	100.00%		H3G5E0              	100.00%
Bootstrap support for Q757W4 as seed ortholog is 100%.
Bootstrap support for H3G5E0 as seed ortholog is 100%.

Group of orthologs #645. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

O60029              	100.00%		H3GCD2              	100.00%
Bootstrap support for O60029 as seed ortholog is 100%.
Bootstrap support for H3GCD2 as seed ortholog is 100%.

Group of orthologs #646. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.ramorum:138

Q750D2              	100.00%		H3GM71              	100.00%
Bootstrap support for Q750D2 as seed ortholog is 100%.
Bootstrap support for H3GM71 as seed ortholog is 99%.

Group of orthologs #647. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.ramorum:245

Q756V5              	100.00%		H3H4A6              	100.00%
Bootstrap support for Q756V5 as seed ortholog is 100%.
Bootstrap support for H3H4A6 as seed ortholog is 100%.

Group of orthologs #648. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.ramorum:50

Q75DI8              	100.00%		H3GZX9              	100.00%
Bootstrap support for Q75DI8 as seed ortholog is 100%.
Bootstrap support for H3GZX9 as seed ortholog is 93%.

Group of orthologs #649. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:39 P.ramorum:56

Q753W7              	100.00%		H3G4Z5              	100.00%
                    	       		H3GMC7              	5.69%
Bootstrap support for Q753W7 as seed ortholog is 80%.
Bootstrap support for H3G4Z5 as seed ortholog is 94%.

Group of orthologs #650. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.ramorum:244

Q755A7              	100.00%		H3GL87              	100.00%
Bootstrap support for Q755A7 as seed ortholog is 99%.
Bootstrap support for H3GL87 as seed ortholog is 100%.

Group of orthologs #651. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 P.ramorum:244

Q75A24              	100.00%		H3HD31              	100.00%
Bootstrap support for Q75A24 as seed ortholog is 100%.
Bootstrap support for H3HD31 as seed ortholog is 100%.

Group of orthologs #652. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.ramorum:243

Q750Y8              	100.00%		H3G8F9              	100.00%
                    	       		H3G9A8              	55.02%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for H3G8F9 as seed ortholog is 100%.

Group of orthologs #653. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.ramorum:243

Q74Z71              	100.00%		H3G797              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for H3G797 as seed ortholog is 100%.

Group of orthologs #654. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.ramorum:243

Q755M2              	100.00%		H3G7N8              	100.00%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for H3G7N8 as seed ortholog is 100%.

Group of orthologs #655. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.ramorum:243

Q758S7              	100.00%		H3G8C7              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for H3G8C7 as seed ortholog is 100%.

Group of orthologs #656. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.ramorum:243

Q75B51              	100.00%		H3GUR6              	100.00%
Bootstrap support for Q75B51 as seed ortholog is 100%.
Bootstrap support for H3GUR6 as seed ortholog is 100%.

Group of orthologs #657. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 P.ramorum:242

Q75BH8              	100.00%		H3GDN0              	100.00%
                    	       		H3GDN1              	64.19%
                    	       		H3GPQ1              	51.43%
                    	       		H3HAL4              	50.10%
                    	       		H3GPP8              	48.76%
                    	       		H3H851              	42.48%
Bootstrap support for Q75BH8 as seed ortholog is 100%.
Bootstrap support for H3GDN0 as seed ortholog is 100%.

Group of orthologs #658. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:24

Q75ES0              	100.00%		H3GW41              	100.00%
                    	       		H3HB65              	17.38%
                    	       		H3GIW2              	17.10%
Bootstrap support for Q75ES0 as seed ortholog is 99%.
Bootstrap support for H3GW41 as seed ortholog is 74%.
Alternative seed ortholog is H3GVV5 (24 bits away from this cluster)

Group of orthologs #659. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 P.ramorum:242

Q752C8              	100.00%		H3G6R7              	100.00%
Bootstrap support for Q752C8 as seed ortholog is 100%.
Bootstrap support for H3G6R7 as seed ortholog is 100%.

Group of orthologs #660. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 P.ramorum:242

Q75DB6              	100.00%		H3GAH7              	100.00%
Bootstrap support for Q75DB6 as seed ortholog is 100%.
Bootstrap support for H3GAH7 as seed ortholog is 100%.

Group of orthologs #661. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 P.ramorum:85

Q75B56              	100.00%		H3G8B5              	100.00%
Bootstrap support for Q75B56 as seed ortholog is 100%.
Bootstrap support for H3G8B5 as seed ortholog is 99%.

Group of orthologs #662. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 P.ramorum:241

Q751A3              	100.00%		H3GNL2              	100.00%
Bootstrap support for Q751A3 as seed ortholog is 100%.
Bootstrap support for H3GNL2 as seed ortholog is 100%.

Group of orthologs #663. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 P.ramorum:241

Q75AB5              	100.00%		H3GGZ4              	100.00%
Bootstrap support for Q75AB5 as seed ortholog is 100%.
Bootstrap support for H3GGZ4 as seed ortholog is 100%.

Group of orthologs #664. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 P.ramorum:240

Q752T4              	100.00%		H3GWA6              	100.00%
Q74ZA2              	12.47%		
Bootstrap support for Q752T4 as seed ortholog is 100%.
Bootstrap support for H3GWA6 as seed ortholog is 100%.

Group of orthologs #665. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:240

O60027              	100.00%		H3G9I6              	100.00%
Bootstrap support for O60027 as seed ortholog is 97%.
Bootstrap support for H3G9I6 as seed ortholog is 100%.

Group of orthologs #666. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 P.ramorum:240

Q75A89              	100.00%		H3GEK8              	100.00%
Bootstrap support for Q75A89 as seed ortholog is 100%.
Bootstrap support for H3GEK8 as seed ortholog is 100%.

Group of orthologs #667. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 P.ramorum:117

Q75D79              	100.00%		H3GT37              	100.00%
Bootstrap support for Q75D79 as seed ortholog is 100%.
Bootstrap support for H3GT37 as seed ortholog is 99%.

Group of orthologs #668. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:239

Q756T8              	100.00%		H3G775              	100.00%
                    	       		H3G697              	26.36%
                    	       		H3G698              	26.07%
                    	       		H3G7X2              	6.63%
Bootstrap support for Q756T8 as seed ortholog is 99%.
Bootstrap support for H3G775 as seed ortholog is 100%.

Group of orthologs #669. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 P.ramorum:239

Q75F45              	100.00%		H3GAP0              	100.00%
Bootstrap support for Q75F45 as seed ortholog is 100%.
Bootstrap support for H3GAP0 as seed ortholog is 100%.

Group of orthologs #670. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 P.ramorum:239

Q758P1              	100.00%		H3GLR2              	100.00%
Bootstrap support for Q758P1 as seed ortholog is 100%.
Bootstrap support for H3GLR2 as seed ortholog is 100%.

Group of orthologs #671. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:238

Q757N1              	100.00%		H3G880              	100.00%
                    	       		H3G9N3              	55.56%
Bootstrap support for Q757N1 as seed ortholog is 100%.
Bootstrap support for H3G880 as seed ortholog is 100%.

Group of orthologs #672. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 P.ramorum:238

Q75F80              	100.00%		H3G859              	100.00%
Bootstrap support for Q75F80 as seed ortholog is 100%.
Bootstrap support for H3G859 as seed ortholog is 100%.

Group of orthologs #673. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 P.ramorum:238

Q754J8              	100.00%		H3H1J9              	100.00%
Bootstrap support for Q754J8 as seed ortholog is 100%.
Bootstrap support for H3H1J9 as seed ortholog is 100%.

Group of orthologs #674. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:35 P.ramorum:237

Q74Z35              	100.00%		H3GAR4              	100.00%
Q751A4              	43.64%		
Q759G2              	12.21%		
Bootstrap support for Q74Z35 as seed ortholog is 88%.
Bootstrap support for H3GAR4 as seed ortholog is 100%.

Group of orthologs #675. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 P.ramorum:237

Q75EW1              	100.00%		H3G546              	100.00%
Bootstrap support for Q75EW1 as seed ortholog is 100%.
Bootstrap support for H3G546 as seed ortholog is 100%.

Group of orthologs #676. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 P.ramorum:237

Q753B2              	100.00%		H3GI71              	100.00%
Bootstrap support for Q753B2 as seed ortholog is 100%.
Bootstrap support for H3GI71 as seed ortholog is 100%.

Group of orthologs #677. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 P.ramorum:237

Q756E7              	100.00%		H3GUB3              	100.00%
Bootstrap support for Q756E7 as seed ortholog is 100%.
Bootstrap support for H3GUB3 as seed ortholog is 100%.

Group of orthologs #678. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 P.ramorum:237

Q758H5              	100.00%		H3GV85              	100.00%
Bootstrap support for Q758H5 as seed ortholog is 100%.
Bootstrap support for H3GV85 as seed ortholog is 100%.

Group of orthologs #679. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 P.ramorum:77

Q757N7              	100.00%		H3G9E5              	100.00%
Bootstrap support for Q757N7 as seed ortholog is 100%.
Bootstrap support for H3G9E5 as seed ortholog is 98%.

Group of orthologs #680. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 P.ramorum:236

Q75EK1              	100.00%		H3GJC5              	100.00%
Bootstrap support for Q75EK1 as seed ortholog is 100%.
Bootstrap support for H3GJC5 as seed ortholog is 100%.

Group of orthologs #681. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.ramorum:235

Q75BS3              	100.00%		H3G995              	100.00%
                    	       		H3GH24              	88.92%
                    	       		H3GH23              	73.01%
Bootstrap support for Q75BS3 as seed ortholog is 100%.
Bootstrap support for H3G995 as seed ortholog is 100%.

Group of orthologs #682. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.ramorum:235

Q750E0              	100.00%		H3G916              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for H3G916 as seed ortholog is 100%.

Group of orthologs #683. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.ramorum:235

Q74ZI0              	100.00%		H3HB59              	100.00%
Bootstrap support for Q74ZI0 as seed ortholog is 100%.
Bootstrap support for H3HB59 as seed ortholog is 100%.

Group of orthologs #684. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 P.ramorum:233

Q75BY6              	100.00%		H3GHG7              	100.00%
Bootstrap support for Q75BY6 as seed ortholog is 100%.
Bootstrap support for H3GHG7 as seed ortholog is 100%.

Group of orthologs #685. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:232

Q752U1              	100.00%		H3GB48              	100.00%
                    	       		H3H7S5              	28.18%
Bootstrap support for Q752U1 as seed ortholog is 100%.
Bootstrap support for H3GB48 as seed ortholog is 100%.

Group of orthologs #686. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:232

Q75CN7              	100.00%		H3GGV7              	100.00%
                    	       		H3G533              	36.36%
Bootstrap support for Q75CN7 as seed ortholog is 100%.
Bootstrap support for H3GGV7 as seed ortholog is 100%.

Group of orthologs #687. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:150

Q753M7              	100.00%		H3G8V5              	100.00%
Bootstrap support for Q753M7 as seed ortholog is 100%.
Bootstrap support for H3G8V5 as seed ortholog is 100%.

Group of orthologs #688. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:102

Q75CA9              	100.00%		H3G9D1              	100.00%
Bootstrap support for Q75CA9 as seed ortholog is 100%.
Bootstrap support for H3G9D1 as seed ortholog is 99%.

Group of orthologs #689. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:232

Q75F88              	100.00%		H3G8A4              	100.00%
Bootstrap support for Q75F88 as seed ortholog is 100%.
Bootstrap support for H3G8A4 as seed ortholog is 100%.

Group of orthologs #690. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:232

Q757S9              	100.00%		H3GII1              	100.00%
Bootstrap support for Q757S9 as seed ortholog is 100%.
Bootstrap support for H3GII1 as seed ortholog is 100%.

Group of orthologs #691. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:232

Q75DH0              	100.00%		H3GET8              	100.00%
Bootstrap support for Q75DH0 as seed ortholog is 100%.
Bootstrap support for H3GET8 as seed ortholog is 100%.

Group of orthologs #692. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.ramorum:20

Q751Z3              	100.00%		H3H1V3              	100.00%
Bootstrap support for Q751Z3 as seed ortholog is 98%.
Bootstrap support for H3H1V3 as seed ortholog is 98%.

Group of orthologs #693. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:232

Q75D60              	100.00%		H3H0W7              	100.00%
Bootstrap support for Q75D60 as seed ortholog is 100%.
Bootstrap support for H3H0W7 as seed ortholog is 100%.

Group of orthologs #694. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:14

Q75BM2              	100.00%		H3HBD0              	100.00%
Bootstrap support for Q75BM2 as seed ortholog is 99%.
Bootstrap support for H3HBD0 as seed ortholog is 69%.
Alternative seed ortholog is H3HE02 (14 bits away from this cluster)

Group of orthologs #695. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.ramorum:170

Q75E36              	100.00%		H3HED0              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for H3HED0 as seed ortholog is 100%.

Group of orthologs #696. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 P.ramorum:231

Q758E0              	100.00%		H3G7S0              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for H3G7S0 as seed ortholog is 100%.

Group of orthologs #697. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 P.ramorum:231

Q759A8              	100.00%		H3GTZ8              	100.00%
Bootstrap support for Q759A8 as seed ortholog is 100%.
Bootstrap support for H3GTZ8 as seed ortholog is 100%.

Group of orthologs #698. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.ramorum:69

Q75C62              	100.00%		H3GAR1              	100.00%
                    	       		H3G8L1              	38.67%
Bootstrap support for Q75C62 as seed ortholog is 93%.
Bootstrap support for H3GAR1 as seed ortholog is 98%.

Group of orthologs #699. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:109

Q74ZS7              	100.00%		H3G9K8              	100.00%
Bootstrap support for Q74ZS7 as seed ortholog is 99%.
Bootstrap support for H3G9K8 as seed ortholog is 100%.

Group of orthologs #700. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.ramorum:230

Q751J4              	100.00%		H3G962              	100.00%
Bootstrap support for Q751J4 as seed ortholog is 100%.
Bootstrap support for H3G962 as seed ortholog is 100%.

Group of orthologs #701. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.ramorum:124

Q755D7              	100.00%		H3G8B2              	100.00%
Bootstrap support for Q755D7 as seed ortholog is 100%.
Bootstrap support for H3G8B2 as seed ortholog is 100%.

Group of orthologs #702. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.ramorum:230

Q756X2              	100.00%		H3GQQ7              	100.00%
Bootstrap support for Q756X2 as seed ortholog is 100%.
Bootstrap support for H3GQQ7 as seed ortholog is 100%.

Group of orthologs #703. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.ramorum:94

Q758V7              	100.00%		H3GS79              	100.00%
Bootstrap support for Q758V7 as seed ortholog is 100%.
Bootstrap support for H3GS79 as seed ortholog is 99%.

Group of orthologs #704. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 P.ramorum:229

Q759F0              	100.00%		H3GAF4              	100.00%
                    	       		H3H0A4              	70.66%
                    	       		H3G6Z6              	62.19%
                    	       		H3H099              	59.50%
                    	       		H3H0A0              	59.50%
                    	       		H3GAF3              	57.64%
                    	       		H3G816              	57.44%
                    	       		H3G5C2              	55.58%
                    	       		H3G5I5              	55.17%
                    	       		H3GAF1              	50.21%
                    	       		H3H0A1              	46.28%
                    	       		H3G818              	45.25%
                    	       		H3GAF2              	42.77%
                    	       		H3H098              	38.64%
                    	       		H3GAF0              	36.57%
                    	       		H3H0A3              	12.60%
Bootstrap support for Q759F0 as seed ortholog is 100%.
Bootstrap support for H3GAF4 as seed ortholog is 100%.

Group of orthologs #705. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 P.ramorum:229

Q750N9              	100.00%		H3G9M2              	100.00%
Bootstrap support for Q750N9 as seed ortholog is 100%.
Bootstrap support for H3G9M2 as seed ortholog is 100%.

Group of orthologs #706. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.ramorum:38

Q756F8              	100.00%		H3GBJ0              	100.00%
Bootstrap support for Q756F8 as seed ortholog is 100%.
Bootstrap support for H3GBJ0 as seed ortholog is 79%.

Group of orthologs #707. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.ramorum:228

Q75B78              	100.00%		H3G7L2              	100.00%
Bootstrap support for Q75B78 as seed ortholog is 100%.
Bootstrap support for H3G7L2 as seed ortholog is 100%.

Group of orthologs #708. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.ramorum:228

Q75BR9              	100.00%		H3GA48              	100.00%
Bootstrap support for Q75BR9 as seed ortholog is 100%.
Bootstrap support for H3GA48 as seed ortholog is 100%.

Group of orthologs #709. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:228

Q75C48              	100.00%		H3GSS3              	100.00%
Bootstrap support for Q75C48 as seed ortholog is 99%.
Bootstrap support for H3GSS3 as seed ortholog is 100%.

Group of orthologs #710. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 P.ramorum:227

Q75CD7              	100.00%		H3GS31              	100.00%
Bootstrap support for Q75CD7 as seed ortholog is 100%.
Bootstrap support for H3GS31 as seed ortholog is 100%.

Group of orthologs #711. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.ramorum:65

Q74Z77              	100.00%		H3H1C9              	100.00%
                    	       		H3GAJ5              	65.76%
                    	       		H3GB81              	49.09%
                    	       		H3G9B6              	47.64%
                    	       		H3G9B4              	45.83%
                    	       		H3GAI6              	42.39%
                    	       		H3GB00              	40.76%
                    	       		H3G8H3              	38.04%
                    	       		H3G9P4              	36.41%
                    	       		H3G7J7              	27.54%
                    	       		H3G622              	9.78%
                    	       		H3H151              	9.42%
                    	       		H3G5T7              	7.79%
                    	       		H3GAP7              	7.07%
                    	       		H3GAP5              	6.16%
Bootstrap support for Q74Z77 as seed ortholog is 100%.
Bootstrap support for H3H1C9 as seed ortholog is 92%.

Group of orthologs #712. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.ramorum:226

Q750I1              	100.00%		H3G9F0              	100.00%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for H3G9F0 as seed ortholog is 100%.

Group of orthologs #713. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.ramorum:226

Q757M7              	100.00%		H3GLH0              	100.00%
Bootstrap support for Q757M7 as seed ortholog is 100%.
Bootstrap support for H3GLH0 as seed ortholog is 100%.

Group of orthologs #714. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.ramorum:226

Q756X6              	100.00%		H3GY61              	100.00%
Bootstrap support for Q756X6 as seed ortholog is 100%.
Bootstrap support for H3GY61 as seed ortholog is 100%.

Group of orthologs #715. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.ramorum:226

Q75BC0              	100.00%		H3GXX6              	100.00%
Bootstrap support for Q75BC0 as seed ortholog is 100%.
Bootstrap support for H3GXX6 as seed ortholog is 100%.

Group of orthologs #716. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:19

Q756F9              	100.00%		H3G9V4              	100.00%
                    	       		H3GB90              	99.44%
                    	       		H3G9V3              	98.32%
                    	       		H3G661              	87.15%
                    	       		H3GB95              	52.51%
                    	       		H3G9V0              	41.34%
Bootstrap support for Q756F9 as seed ortholog is 100%.
Bootstrap support for H3G9V4 as seed ortholog is 78%.

Group of orthologs #717. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:38

Q750W6              	100.00%		H3G8M8              	100.00%
Q756U6              	19.47%		H3G772              	34.09%
                    	       		H3GAB0              	23.48%
                    	       		H3G525              	8.33%
Bootstrap support for Q750W6 as seed ortholog is 100%.
Bootstrap support for H3G8M8 as seed ortholog is 93%.

Group of orthologs #718. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.ramorum:156

Q755Y2              	100.00%		H3GKC1              	100.00%
Q759S6              	5.22%		H3GKC2              	96.52%
                    	       		H3GKC0              	70.93%
                    	       		H3GKB7              	70.38%
Bootstrap support for Q755Y2 as seed ortholog is 99%.
Bootstrap support for H3GKC1 as seed ortholog is 99%.

Group of orthologs #719. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:67

Q75ET2              	100.00%		H3GA13              	100.00%
                    	       		H3HAB9              	72.69%
Bootstrap support for Q75ET2 as seed ortholog is 90%.
Bootstrap support for H3GA13 as seed ortholog is 88%.

Group of orthologs #720. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:225

Q750U5              	100.00%		H3GBZ0              	100.00%
Bootstrap support for Q750U5 as seed ortholog is 100%.
Bootstrap support for H3GBZ0 as seed ortholog is 100%.

Group of orthologs #721. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:225

Q757V8              	100.00%		H3G8N7              	100.00%
Bootstrap support for Q757V8 as seed ortholog is 100%.
Bootstrap support for H3G8N7 as seed ortholog is 100%.

Group of orthologs #722. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.ramorum:144

Q756Y2              	100.00%		H3G9C7              	100.00%
Bootstrap support for Q756Y2 as seed ortholog is 100%.
Bootstrap support for H3G9C7 as seed ortholog is 100%.

Group of orthologs #723. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:225

Q750N6              	100.00%		H3GN50              	100.00%
Bootstrap support for Q750N6 as seed ortholog is 100%.
Bootstrap support for H3GN50 as seed ortholog is 100%.

Group of orthologs #724. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:225

Q75AP1              	100.00%		H3GGT2              	100.00%
Bootstrap support for Q75AP1 as seed ortholog is 100%.
Bootstrap support for H3GGT2 as seed ortholog is 100%.

Group of orthologs #725. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.ramorum:225

Q754U1              	100.00%		H3GXH4              	100.00%
Bootstrap support for Q754U1 as seed ortholog is 100%.
Bootstrap support for H3GXH4 as seed ortholog is 100%.

Group of orthologs #726. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 P.ramorum:224

Q750X2              	100.00%		H3GZH0              	100.00%
Bootstrap support for Q750X2 as seed ortholog is 100%.
Bootstrap support for H3GZH0 as seed ortholog is 100%.

Group of orthologs #727. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 P.ramorum:224

Q754Y8              	100.00%		H3GZ38              	100.00%
Bootstrap support for Q754Y8 as seed ortholog is 100%.
Bootstrap support for H3GZ38 as seed ortholog is 100%.

Group of orthologs #728. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.ramorum:28

Q750L3              	100.00%		H3G925              	100.00%
                    	       		H3G5A9              	10.53%
Bootstrap support for Q750L3 as seed ortholog is 99%.
Bootstrap support for H3G925 as seed ortholog is 82%.

Group of orthologs #729. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.ramorum:223

Q74Z82              	100.00%		H3GBQ6              	100.00%
Bootstrap support for Q74Z82 as seed ortholog is 100%.
Bootstrap support for H3GBQ6 as seed ortholog is 100%.

Group of orthologs #730. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.ramorum:155

Q756K6              	100.00%		H3G855              	100.00%
Bootstrap support for Q756K6 as seed ortholog is 100%.
Bootstrap support for H3G855 as seed ortholog is 99%.

Group of orthologs #731. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:45

Q750J8              	100.00%		H3GDW0              	100.00%
Bootstrap support for Q750J8 as seed ortholog is 97%.
Bootstrap support for H3GDW0 as seed ortholog is 91%.

Group of orthologs #732. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.ramorum:223

Q754I2              	100.00%		H3GEA6              	100.00%
Bootstrap support for Q754I2 as seed ortholog is 100%.
Bootstrap support for H3GEA6 as seed ortholog is 100%.

Group of orthologs #733. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.ramorum:222

Q757J8              	100.00%		H3GPI8              	100.00%
Q756H8              	6.99%		
Bootstrap support for Q757J8 as seed ortholog is 100%.
Bootstrap support for H3GPI8 as seed ortholog is 100%.

Group of orthologs #734. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:35 P.ramorum:47

Q74ZI1              	100.00%		H3G9M4              	100.00%
Bootstrap support for Q74ZI1 as seed ortholog is 94%.
Bootstrap support for H3G9M4 as seed ortholog is 97%.

Group of orthologs #735. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.ramorum:64

Q758B3              	100.00%		H3G6B6              	100.00%
Bootstrap support for Q758B3 as seed ortholog is 100%.
Bootstrap support for H3G6B6 as seed ortholog is 95%.

Group of orthologs #736. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.ramorum:222

Q75ES9              	100.00%		H3G8R9              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for H3G8R9 as seed ortholog is 100%.

Group of orthologs #737. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.ramorum:222

Q75DR9              	100.00%		H3GWU1              	100.00%
Bootstrap support for Q75DR9 as seed ortholog is 100%.
Bootstrap support for H3GWU1 as seed ortholog is 100%.

Group of orthologs #738. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.ramorum:222

Q75EW8              	100.00%		H3HDQ1              	100.00%
Bootstrap support for Q75EW8 as seed ortholog is 100%.
Bootstrap support for H3HDQ1 as seed ortholog is 100%.

Group of orthologs #739. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.ramorum:221

Q75EE9              	100.00%		H3G701              	100.00%
                    	       		H3GSV1              	78.04%
Bootstrap support for Q75EE9 as seed ortholog is 100%.
Bootstrap support for H3G701 as seed ortholog is 100%.

Group of orthologs #740. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.ramorum:221

Q758X7              	100.00%		H3G9D2              	100.00%
Bootstrap support for Q758X7 as seed ortholog is 100%.
Bootstrap support for H3G9D2 as seed ortholog is 100%.

Group of orthologs #741. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.ramorum:221

Q75E05              	100.00%		H3G7J2              	100.00%
Bootstrap support for Q75E05 as seed ortholog is 100%.
Bootstrap support for H3G7J2 as seed ortholog is 100%.

Group of orthologs #742. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.ramorum:221

Q75CJ6              	100.00%		H3GAS4              	100.00%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for H3GAS4 as seed ortholog is 100%.

Group of orthologs #743. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.ramorum:221

Q756C6              	100.00%		H3GNQ5              	100.00%
Bootstrap support for Q756C6 as seed ortholog is 100%.
Bootstrap support for H3GNQ5 as seed ortholog is 100%.

Group of orthologs #744. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.ramorum:221

Q75EH1              	100.00%		H3GU44              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for H3GU44 as seed ortholog is 100%.

Group of orthologs #745. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.ramorum:220

Q752S5              	100.00%		H3G8W1              	100.00%
                    	       		H3G975              	16.10%
Bootstrap support for Q752S5 as seed ortholog is 49%.
Alternative seed ortholog is Q75AG7 (1 bits away from this cluster)
Bootstrap support for H3G8W1 as seed ortholog is 100%.

Group of orthologs #746. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.ramorum:220

Q75B81              	100.00%		H3G9U4              	100.00%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for H3G9U4 as seed ortholog is 100%.

Group of orthologs #747. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.ramorum:220

Q75F07              	100.00%		H3G7F3              	100.00%
Bootstrap support for Q75F07 as seed ortholog is 100%.
Bootstrap support for H3G7F3 as seed ortholog is 100%.

Group of orthologs #748. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.ramorum:220

Q751G6              	100.00%		H3GMT2              	100.00%
Bootstrap support for Q751G6 as seed ortholog is 100%.
Bootstrap support for H3GMT2 as seed ortholog is 100%.

Group of orthologs #749. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.ramorum:220

Q75EG2              	100.00%		H3GNU1              	100.00%
Bootstrap support for Q75EG2 as seed ortholog is 100%.
Bootstrap support for H3GNU1 as seed ortholog is 100%.

Group of orthologs #750. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 P.ramorum:219

Q75D56              	100.00%		H3GMQ0              	100.00%
                    	       		H3GQ20              	7.07%
Bootstrap support for Q75D56 as seed ortholog is 100%.
Bootstrap support for H3GMQ0 as seed ortholog is 100%.

Group of orthologs #751. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 P.ramorum:219

Q758S8              	100.00%		H3G5S7              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 100%.
Bootstrap support for H3G5S7 as seed ortholog is 100%.

Group of orthologs #752. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:219

Q757P1              	100.00%		H3GBF8              	100.00%
Bootstrap support for Q757P1 as seed ortholog is 99%.
Bootstrap support for H3GBF8 as seed ortholog is 100%.

Group of orthologs #753. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 P.ramorum:219

Q75ES6              	100.00%		H3GVC2              	100.00%
Bootstrap support for Q75ES6 as seed ortholog is 100%.
Bootstrap support for H3GVC2 as seed ortholog is 100%.

Group of orthologs #754. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.ramorum:218

Q750E8              	100.00%		H3G8Y5              	100.00%
Bootstrap support for Q750E8 as seed ortholog is 99%.
Bootstrap support for H3G8Y5 as seed ortholog is 100%.

Group of orthologs #755. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 P.ramorum:218

Q757V5              	100.00%		H3G8K0              	100.00%
Bootstrap support for Q757V5 as seed ortholog is 100%.
Bootstrap support for H3G8K0 as seed ortholog is 100%.

Group of orthologs #756. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 P.ramorum:84

Q759E2              	100.00%		H3GDM7              	100.00%
Bootstrap support for Q759E2 as seed ortholog is 100%.
Bootstrap support for H3GDM7 as seed ortholog is 89%.

Group of orthologs #757. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 P.ramorum:218

Q758A5              	100.00%		H3HC64              	100.00%
Bootstrap support for Q758A5 as seed ortholog is 100%.
Bootstrap support for H3HC64 as seed ortholog is 100%.

Group of orthologs #758. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 P.ramorum:217

Q75D29              	100.00%		H3G591              	100.00%
Bootstrap support for Q75D29 as seed ortholog is 100%.
Bootstrap support for H3G591 as seed ortholog is 100%.

Group of orthologs #759. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 P.ramorum:217

Q75AQ1              	100.00%		H3G971              	100.00%
Bootstrap support for Q75AQ1 as seed ortholog is 100%.
Bootstrap support for H3G971 as seed ortholog is 100%.

Group of orthologs #760. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:128

Q759K2              	100.00%		H3HAT3              	100.00%
Bootstrap support for Q759K2 as seed ortholog is 99%.
Bootstrap support for H3HAT3 as seed ortholog is 99%.

Group of orthologs #761. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.ramorum:216

Q756S5              	100.00%		H3G5G6              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for H3G5G6 as seed ortholog is 100%.

Group of orthologs #762. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.ramorum:9

Q756D1              	100.00%		H3GBW6              	100.00%
Bootstrap support for Q756D1 as seed ortholog is 100%.
Bootstrap support for H3GBW6 as seed ortholog is 59%.
Alternative seed ortholog is H3G939 (9 bits away from this cluster)

Group of orthologs #763. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:216

Q750L2              	100.00%		H3GH46              	100.00%
Bootstrap support for Q750L2 as seed ortholog is 99%.
Bootstrap support for H3GH46 as seed ortholog is 100%.

Group of orthologs #764. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.ramorum:216

Q75D05              	100.00%		H3G9F9              	100.00%
Bootstrap support for Q75D05 as seed ortholog is 100%.
Bootstrap support for H3G9F9 as seed ortholog is 100%.

Group of orthologs #765. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 P.ramorum:215

Q75AU7              	100.00%		H3GBR9              	100.00%
Bootstrap support for Q75AU7 as seed ortholog is 100%.
Bootstrap support for H3GBR9 as seed ortholog is 100%.

Group of orthologs #766. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:91

Q755M1              	100.00%		H3GCR6              	100.00%
Q755L9              	73.43%		H3H5U5              	59.31%
Q755L8              	63.28%		H3H3Z9              	59.19%
Q752H1              	19.27%		H3GAV3              	57.64%
Q75A29              	5.82%		H3H7B4              	57.64%
                    	       		H3H4C4              	57.64%
                    	       		H3G977              	57.04%
                    	       		H3GTA9              	50.36%
                    	       		H3GTC3              	49.64%
                    	       		H3GTC2              	47.49%
Bootstrap support for Q755M1 as seed ortholog is 91%.
Bootstrap support for H3GCR6 as seed ortholog is 97%.

Group of orthologs #767. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 P.ramorum:214

Q75B12              	100.00%		H3GC81              	100.00%
Bootstrap support for Q75B12 as seed ortholog is 100%.
Bootstrap support for H3GC81 as seed ortholog is 100%.

Group of orthologs #768. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 P.ramorum:214

Q75CP8              	100.00%		H3GAL6              	100.00%
Bootstrap support for Q75CP8 as seed ortholog is 100%.
Bootstrap support for H3GAL6 as seed ortholog is 100%.

Group of orthologs #769. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:37 P.ramorum:213

Q75DX9              	100.00%		H3H3D6              	100.00%
                    	       		H3GUI6              	40.75%
Bootstrap support for Q75DX9 as seed ortholog is 69%.
Alternative seed ortholog is Q74ZM9 (37 bits away from this cluster)
Bootstrap support for H3H3D6 as seed ortholog is 100%.

Group of orthologs #770. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 P.ramorum:213

Q756A0              	100.00%		H3G8D4              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for H3G8D4 as seed ortholog is 100%.

Group of orthologs #771. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 P.ramorum:115

Q75C20              	100.00%		H3G9J9              	100.00%
Bootstrap support for Q75C20 as seed ortholog is 100%.
Bootstrap support for H3G9J9 as seed ortholog is 99%.

Group of orthologs #772. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 P.ramorum:212

Q752M9              	100.00%		H3GJH2              	100.00%
                    	       		H3GJH7              	72.35%
                    	       		H3GJH1              	71.35%
                    	       		H3GJH6              	65.30%
                    	       		H3GJH0              	63.79%
                    	       		H3GJH3              	54.21%
                    	       		H3GJG0              	47.88%
                    	       		H3H251              	43.92%
                    	       		H3GJF9              	43.84%
                    	       		H3GJG1              	43.84%
                    	       		H3GX59              	43.27%
                    	       		H3GJF8              	42.84%
                    	       		H3GXR7              	42.55%
                    	       		H3GZ89              	39.67%
                    	       		H3GIQ7              	39.45%
                    	       		H3H5U1              	38.16%
                    	       		H3GES0              	23.04%
Bootstrap support for Q752M9 as seed ortholog is 100%.
Bootstrap support for H3GJH2 as seed ortholog is 100%.

Group of orthologs #773. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 P.ramorum:116

Q751F6              	100.00%		H3GRT1              	100.00%
                    	       		H3H884              	100.00%
Bootstrap support for Q751F6 as seed ortholog is 100%.
Bootstrap support for H3GRT1 as seed ortholog is 99%.
Bootstrap support for H3H884 as seed ortholog is 99%.

Group of orthologs #774. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:109

Q75EB8              	100.00%		H3G8P2              	100.00%
Bootstrap support for Q75EB8 as seed ortholog is 99%.
Bootstrap support for H3G8P2 as seed ortholog is 100%.

Group of orthologs #775. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:79

Q74ZE2              	100.00%		H3HDG0              	100.00%
Bootstrap support for Q74ZE2 as seed ortholog is 99%.
Bootstrap support for H3HDG0 as seed ortholog is 99%.

Group of orthologs #776. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 P.ramorum:211

Q75EC1              	100.00%		H3HCG3              	100.00%
                    	       		H3G8U0              	10.68%
                    	       		H3GA58              	9.46%
Bootstrap support for Q75EC1 as seed ortholog is 100%.
Bootstrap support for H3HCG3 as seed ortholog is 100%.

Group of orthologs #777. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 P.ramorum:211

Q758D0              	100.00%		H3H1I2              	100.00%
Bootstrap support for Q758D0 as seed ortholog is 100%.
Bootstrap support for H3H1I2 as seed ortholog is 100%.

Group of orthologs #778. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:47

Q756M0              	100.00%		H3H5V1              	100.00%
Q757W1              	15.32%		H3H410              	28.37%
Q75EZ1              	9.29%		H3GRJ5              	27.46%
                    	       		H3GN94              	24.90%
                    	       		H3GN11              	19.93%
                    	       		H3GPZ3              	5.46%
Bootstrap support for Q756M0 as seed ortholog is 100%.
Bootstrap support for H3H5V1 as seed ortholog is 82%.

Group of orthologs #779. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:147

Q75CZ4              	100.00%		H3GSN9              	100.00%
Q759Z1              	31.80%		H3GSM9              	55.82%
                    	       		H3GSN0              	50.47%
                    	       		H3GSN3              	49.74%
                    	       		H3GSN1              	44.18%
                    	       		H3GSN2              	37.67%
Bootstrap support for Q75CZ4 as seed ortholog is 100%.
Bootstrap support for H3GSN9 as seed ortholog is 99%.

Group of orthologs #780. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:210

Q75C79              	100.00%		H3G7I7              	100.00%
Q753V1              	100.00%		H3G794              	100.00%
Q75AS9              	28.77%		H3GQQ0              	41.73%
Bootstrap support for Q75C79 as seed ortholog is 100%.
Bootstrap support for Q753V1 as seed ortholog is 100%.
Bootstrap support for H3G7I7 as seed ortholog is 100%.
Bootstrap support for H3G794 as seed ortholog is 100%.

Group of orthologs #781. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:210

Q751N3              	100.00%		H3G8I4              	100.00%
Bootstrap support for Q751N3 as seed ortholog is 100%.
Bootstrap support for H3G8I4 as seed ortholog is 100%.

Group of orthologs #782. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:210

Q751D7              	100.00%		H3G9S6              	100.00%
Bootstrap support for Q751D7 as seed ortholog is 100%.
Bootstrap support for H3G9S6 as seed ortholog is 100%.

Group of orthologs #783. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:210

Q754G6              	100.00%		H3GR83              	100.00%
Bootstrap support for Q754G6 as seed ortholog is 100%.
Bootstrap support for H3GR83 as seed ortholog is 100%.

Group of orthologs #784. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.ramorum:210

Q759F6              	100.00%		H3GS88              	100.00%
Bootstrap support for Q759F6 as seed ortholog is 100%.
Bootstrap support for H3GS88 as seed ortholog is 100%.

Group of orthologs #785. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 P.ramorum:209

Q758K0              	100.00%		H3G912              	100.00%
Bootstrap support for Q758K0 as seed ortholog is 100%.
Bootstrap support for H3G912 as seed ortholog is 100%.

Group of orthologs #786. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 P.ramorum:209

Q75A47              	100.00%		H3GN45              	100.00%
Bootstrap support for Q75A47 as seed ortholog is 100%.
Bootstrap support for H3GN45 as seed ortholog is 100%.

Group of orthologs #787. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 P.ramorum:209

Q75DV1              	100.00%		H3GZU7              	100.00%
Bootstrap support for Q75DV1 as seed ortholog is 100%.
Bootstrap support for H3GZU7 as seed ortholog is 100%.

Group of orthologs #788. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 P.ramorum:146

Q750X9              	100.00%		H3HBK4              	100.00%
Bootstrap support for Q750X9 as seed ortholog is 100%.
Bootstrap support for H3HBK4 as seed ortholog is 99%.

Group of orthologs #789. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.ramorum:208

Q752Z8              	100.00%		H3GH76              	100.00%
Bootstrap support for Q752Z8 as seed ortholog is 100%.
Bootstrap support for H3GH76 as seed ortholog is 100%.

Group of orthologs #790. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:140 P.ramorum:106

Q75C86              	100.00%		H3H0U6              	100.00%
Bootstrap support for Q75C86 as seed ortholog is 99%.
Bootstrap support for H3H0U6 as seed ortholog is 99%.

Group of orthologs #791. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.ramorum:14

Q75AM2              	100.00%		H3HCM2              	100.00%
Bootstrap support for Q75AM2 as seed ortholog is 100%.
Bootstrap support for H3HCM2 as seed ortholog is 69%.
Alternative seed ortholog is H3GIQ4 (14 bits away from this cluster)

Group of orthologs #792. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 P.ramorum:207

Q74ZC8              	100.00%		H3GJS7              	100.00%
Bootstrap support for Q74ZC8 as seed ortholog is 100%.
Bootstrap support for H3GJS7 as seed ortholog is 100%.

Group of orthologs #793. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 P.ramorum:144

Q756D0              	100.00%		H3GU14              	100.00%
Bootstrap support for Q756D0 as seed ortholog is 100%.
Bootstrap support for H3GU14 as seed ortholog is 99%.

Group of orthologs #794. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 P.ramorum:206

Q751S5              	100.00%		H3GBM0              	100.00%
Bootstrap support for Q751S5 as seed ortholog is 100%.
Bootstrap support for H3GBM0 as seed ortholog is 100%.

Group of orthologs #795. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 P.ramorum:123

Q75C26              	100.00%		H3G614              	100.00%
Bootstrap support for Q75C26 as seed ortholog is 100%.
Bootstrap support for H3G614 as seed ortholog is 99%.

Group of orthologs #796. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 P.ramorum:206

Q758A8              	100.00%		H3G9N0              	100.00%
Bootstrap support for Q758A8 as seed ortholog is 100%.
Bootstrap support for H3G9N0 as seed ortholog is 100%.

Group of orthologs #797. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:77

Q754V5              	100.00%		H3G9G5              	100.00%
                    	       		H3GAV1              	58.18%
                    	       		H3GRI0              	9.26%
                    	       		H3G9U0              	9.09%
                    	       		H3G8G9              	8.93%
                    	       		H3GKD1              	8.93%
                    	       		H3GKD0              	8.93%
                    	       		H3GJI8              	8.93%
                    	       		H3H352              	8.93%
                    	       		H3H353              	8.93%
                    	       		H3H358              	8.76%
                    	       		H3H348              	8.76%
                    	       		H3G9A9              	8.26%
                    	       		H3GZ98              	7.77%
                    	       		H3GI21              	7.60%
                    	       		H3H350              	6.28%
                    	       		H3H1G2              	5.79%
                    	       		H3GYG3              	5.45%
Bootstrap support for Q754V5 as seed ortholog is 97%.
Bootstrap support for H3G9G5 as seed ortholog is 96%.

Group of orthologs #798. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 P.ramorum:30

Q759G4              	100.00%		H3H1K1              	100.00%
                    	       		H3H1K3              	46.85%
Bootstrap support for Q759G4 as seed ortholog is 100%.
Bootstrap support for H3H1K1 as seed ortholog is 92%.

Group of orthologs #799. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:82

Q752R6              	100.00%		H3G867              	100.00%
Bootstrap support for Q752R6 as seed ortholog is 98%.
Bootstrap support for H3G867 as seed ortholog is 91%.

Group of orthologs #800. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.ramorum:57

Q759W2              	100.00%		H3G7G0              	100.00%
Bootstrap support for Q759W2 as seed ortholog is 100%.
Bootstrap support for H3G7G0 as seed ortholog is 96%.

Group of orthologs #801. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 P.ramorum:204

Q751Y9              	100.00%		H3GTE2              	100.00%
Bootstrap support for Q751Y9 as seed ortholog is 100%.
Bootstrap support for H3GTE2 as seed ortholog is 100%.

Group of orthologs #802. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 P.ramorum:203

Q751V7              	100.00%		H3G8N1              	100.00%
Bootstrap support for Q751V7 as seed ortholog is 100%.
Bootstrap support for H3G8N1 as seed ortholog is 100%.

Group of orthologs #803. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 P.ramorum:203

Q75B54              	100.00%		H3GK58              	100.00%
Bootstrap support for Q75B54 as seed ortholog is 100%.
Bootstrap support for H3GK58 as seed ortholog is 100%.

Group of orthologs #804. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:202 P.ramorum:133

Q75EG5              	100.00%		H3GNL3              	100.00%
                    	       		H3GWP6              	16.93%
Bootstrap support for Q75EG5 as seed ortholog is 100%.
Bootstrap support for H3GNL3 as seed ortholog is 99%.

Group of orthologs #805. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:202 P.ramorum:202

Q75DV2              	100.00%		H3GUZ7              	100.00%
                    	       		H3GHT8              	7.86%
Bootstrap support for Q75DV2 as seed ortholog is 100%.
Bootstrap support for H3GUZ7 as seed ortholog is 100%.

Group of orthologs #806. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 P.ramorum:201

Q75DU1              	100.00%		H3GLQ1              	100.00%
Q753C0              	5.83%		
Bootstrap support for Q75DU1 as seed ortholog is 100%.
Bootstrap support for H3GLQ1 as seed ortholog is 100%.

Group of orthologs #807. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 P.ramorum:201

Q752J5              	100.00%		H3GA40              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for H3GA40 as seed ortholog is 100%.

Group of orthologs #808. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 P.ramorum:201

Q75BA5              	100.00%		H3G6M0              	100.00%
Bootstrap support for Q75BA5 as seed ortholog is 100%.
Bootstrap support for H3G6M0 as seed ortholog is 100%.

Group of orthologs #809. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 P.ramorum:200

Q74ZF9              	100.00%		H3G7M3              	100.00%
Bootstrap support for Q74ZF9 as seed ortholog is 100%.
Bootstrap support for H3G7M3 as seed ortholog is 100%.

Group of orthologs #810. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 P.ramorum:200

Q759L8              	100.00%		H3G8T5              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for H3G8T5 as seed ortholog is 100%.

Group of orthologs #811. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:200

Q756I1              	100.00%		H3H2J5              	100.00%
Bootstrap support for Q756I1 as seed ortholog is 86%.
Bootstrap support for H3H2J5 as seed ortholog is 100%.

Group of orthologs #812. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.ramorum:199

Q75CK1              	100.00%		H3G4Z2              	100.00%
Bootstrap support for Q75CK1 as seed ortholog is 100%.
Bootstrap support for H3G4Z2 as seed ortholog is 100%.

Group of orthologs #813. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.ramorum:199

Q75EE7              	100.00%		H3G9L4              	100.00%
Bootstrap support for Q75EE7 as seed ortholog is 100%.
Bootstrap support for H3G9L4 as seed ortholog is 100%.

Group of orthologs #814. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.ramorum:199

Q751Q9              	100.00%		H3GQR9              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for H3GQR9 as seed ortholog is 100%.

Group of orthologs #815. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.ramorum:199

Q75AU0              	100.00%		H3GYD8              	100.00%
Bootstrap support for Q75AU0 as seed ortholog is 100%.
Bootstrap support for H3GYD8 as seed ortholog is 100%.

Group of orthologs #816. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.ramorum:199

Q75DK2              	100.00%		H3GY08              	100.00%
Bootstrap support for Q75DK2 as seed ortholog is 100%.
Bootstrap support for H3GY08 as seed ortholog is 100%.

Group of orthologs #817. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.ramorum:198

Q756F0              	100.00%		H3G6N3              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 100%.
Bootstrap support for H3G6N3 as seed ortholog is 100%.

Group of orthologs #818. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.ramorum:198

Q755C7              	100.00%		H3G8T4              	100.00%
Bootstrap support for Q755C7 as seed ortholog is 100%.
Bootstrap support for H3G8T4 as seed ortholog is 100%.

Group of orthologs #819. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:40 P.ramorum:89

Q75B39              	100.00%		H3GA69              	100.00%
Bootstrap support for Q75B39 as seed ortholog is 90%.
Bootstrap support for H3GA69 as seed ortholog is 99%.

Group of orthologs #820. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.ramorum:127

Q75EC3              	100.00%		H3G796              	100.00%
Bootstrap support for Q75EC3 as seed ortholog is 98%.
Bootstrap support for H3G796 as seed ortholog is 99%.

Group of orthologs #821. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.ramorum:132

Q757A9              	100.00%		H3GKK6              	100.00%
Bootstrap support for Q757A9 as seed ortholog is 100%.
Bootstrap support for H3GKK6 as seed ortholog is 100%.

Group of orthologs #822. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.ramorum:198

Q75ET1              	100.00%		H3GI54              	100.00%
Bootstrap support for Q75ET1 as seed ortholog is 100%.
Bootstrap support for H3GI54 as seed ortholog is 100%.

Group of orthologs #823. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 P.ramorum:197

Q75C11              	100.00%		H3G7X6              	100.00%
Bootstrap support for Q75C11 as seed ortholog is 100%.
Bootstrap support for H3G7X6 as seed ortholog is 100%.

Group of orthologs #824. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 P.ramorum:197

Q74ZA6              	100.00%		H3HC72              	100.00%
Bootstrap support for Q74ZA6 as seed ortholog is 100%.
Bootstrap support for H3HC72 as seed ortholog is 100%.

Group of orthologs #825. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 P.ramorum:197

Q753Z6              	100.00%		H3HCB3              	100.00%
Bootstrap support for Q753Z6 as seed ortholog is 100%.
Bootstrap support for H3HCB3 as seed ortholog is 100%.

Group of orthologs #826. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 P.ramorum:196

Q757T2              	100.00%		H3G9W2              	100.00%
Bootstrap support for Q757T2 as seed ortholog is 100%.
Bootstrap support for H3G9W2 as seed ortholog is 100%.

Group of orthologs #827. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 P.ramorum:107

Q75BD8              	100.00%		H3G9C0              	100.00%
Bootstrap support for Q75BD8 as seed ortholog is 100%.
Bootstrap support for H3G9C0 as seed ortholog is 100%.

Group of orthologs #828. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 P.ramorum:196

Q75DY0              	100.00%		H3GU37              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for H3GU37 as seed ortholog is 100%.

Group of orthologs #829. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 P.ramorum:144

Q75EK7              	100.00%		H3GYM5              	100.00%
Bootstrap support for Q75EK7 as seed ortholog is 100%.
Bootstrap support for H3GYM5 as seed ortholog is 99%.

Group of orthologs #830. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:24 P.ramorum:195

Q75E75              	100.00%		H3G9U3              	100.00%
                    	       		H3G9U6              	59.33%
                    	       		H3GAS3              	40.67%
                    	       		H3GME0              	40.11%
                    	       		H3G908              	39.00%
Bootstrap support for Q75E75 as seed ortholog is 74%.
Alternative seed ortholog is Q755W7 (24 bits away from this cluster)
Bootstrap support for H3G9U3 as seed ortholog is 100%.

Group of orthologs #831. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:61

Q74Z34              	100.00%		H3GEL4              	100.00%
                    	       		H3GEL5              	23.95%
Bootstrap support for Q74Z34 as seed ortholog is 100%.
Bootstrap support for H3GEL4 as seed ortholog is 99%.

Group of orthologs #832. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.ramorum:195

Q75DW4              	100.00%		H3GAY1              	100.00%
                    	       		H3GAD4              	82.68%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for H3GAY1 as seed ortholog is 100%.

Group of orthologs #833. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.ramorum:195

Q754V6              	100.00%		H3G7U4              	100.00%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for H3G7U4 as seed ortholog is 100%.

Group of orthologs #834. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.ramorum:195

Q759E4              	100.00%		H3GG19              	100.00%
Bootstrap support for Q759E4 as seed ortholog is 100%.
Bootstrap support for H3GG19 as seed ortholog is 100%.

Group of orthologs #835. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.ramorum:195

Q759V1              	100.00%		H3GQ98              	100.00%
Bootstrap support for Q759V1 as seed ortholog is 100%.
Bootstrap support for H3GQ98 as seed ortholog is 100%.

Group of orthologs #836. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.ramorum:195

Q75E54              	100.00%		H3GNT3              	100.00%
Bootstrap support for Q75E54 as seed ortholog is 100%.
Bootstrap support for H3GNT3 as seed ortholog is 100%.

Group of orthologs #837. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.ramorum:195

Q755M0              	100.00%		H3H5G2              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for H3H5G2 as seed ortholog is 100%.

Group of orthologs #838. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 P.ramorum:194

Q759Q8              	100.00%		H3GAD8              	100.00%
Bootstrap support for Q759Q8 as seed ortholog is 100%.
Bootstrap support for H3GAD8 as seed ortholog is 100%.

Group of orthologs #839. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.ramorum:100

Q75BA4              	100.00%		H3G9K1              	100.00%
Bootstrap support for Q75BA4 as seed ortholog is 100%.
Bootstrap support for H3G9K1 as seed ortholog is 100%.

Group of orthologs #840. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 P.ramorum:194

Q75EW2              	100.00%		H3G9T8              	100.00%
Bootstrap support for Q75EW2 as seed ortholog is 100%.
Bootstrap support for H3G9T8 as seed ortholog is 100%.

Group of orthologs #841. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 P.ramorum:194

Q754J0              	100.00%		H3GUH8              	100.00%
Bootstrap support for Q754J0 as seed ortholog is 100%.
Bootstrap support for H3GUH8 as seed ortholog is 100%.

Group of orthologs #842. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:123

Q757F7              	100.00%		H3G5G1              	100.00%
Bootstrap support for Q757F7 as seed ortholog is 99%.
Bootstrap support for H3G5G1 as seed ortholog is 100%.

Group of orthologs #843. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.ramorum:5

Q750W7              	100.00%		H3GB19              	100.00%
Bootstrap support for Q750W7 as seed ortholog is 100%.
Bootstrap support for H3GB19 as seed ortholog is 56%.
Alternative seed ortholog is H3GYC8 (5 bits away from this cluster)

Group of orthologs #844. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:99

Q757Q7              	100.00%		H3G861              	100.00%
Bootstrap support for Q757Q7 as seed ortholog is 99%.
Bootstrap support for H3G861 as seed ortholog is 99%.

Group of orthologs #845. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.ramorum:193

Q75DL7              	100.00%		H3G5L7              	100.00%
Bootstrap support for Q75DL7 as seed ortholog is 100%.
Bootstrap support for H3G5L7 as seed ortholog is 100%.

Group of orthologs #846. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.ramorum:193

Q74Z39              	100.00%		H3GRQ7              	100.00%
Bootstrap support for Q74Z39 as seed ortholog is 100%.
Bootstrap support for H3GRQ7 as seed ortholog is 100%.

Group of orthologs #847. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.ramorum:193

Q75BB5              	100.00%		H3GIY8              	100.00%
Bootstrap support for Q75BB5 as seed ortholog is 100%.
Bootstrap support for H3GIY8 as seed ortholog is 100%.

Group of orthologs #848. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.ramorum:193

Q753N8              	100.00%		H3GQ96              	100.00%
Bootstrap support for Q753N8 as seed ortholog is 100%.
Bootstrap support for H3GQ96 as seed ortholog is 100%.

Group of orthologs #849. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 P.ramorum:98

Q755R8              	100.00%		H3G9X5              	100.00%
                    	       		H3GV89              	80.81%
Bootstrap support for Q755R8 as seed ortholog is 100%.
Bootstrap support for H3G9X5 as seed ortholog is 99%.

Group of orthologs #850. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 P.ramorum:191

Q75AX1              	100.00%		H3G9Z5              	100.00%
Q757K0              	100.00%		
Bootstrap support for Q75AX1 as seed ortholog is 100%.
Bootstrap support for Q757K0 as seed ortholog is 100%.
Bootstrap support for H3G9Z5 as seed ortholog is 100%.

Group of orthologs #851. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:80

Q756N2              	100.00%		H3GBB6              	100.00%
Bootstrap support for Q756N2 as seed ortholog is 98%.
Bootstrap support for H3GBB6 as seed ortholog is 97%.

Group of orthologs #852. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:191

Q751X9              	100.00%		H3GK13              	100.00%
Bootstrap support for Q751X9 as seed ortholog is 73%.
Alternative seed ortholog is Q758E7 (50 bits away from this cluster)
Bootstrap support for H3GK13 as seed ortholog is 100%.

Group of orthologs #853. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 P.ramorum:191

Q9HFW3              	100.00%		H3GMU5              	100.00%
Bootstrap support for Q9HFW3 as seed ortholog is 100%.
Bootstrap support for H3GMU5 as seed ortholog is 100%.

Group of orthologs #854. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.ramorum:41

Q757T3              	100.00%		H3GRU7              	100.00%
Q751T7              	5.78%		H3G534              	26.56%
Bootstrap support for Q757T3 as seed ortholog is 100%.
Bootstrap support for H3GRU7 as seed ortholog is 74%.
Alternative seed ortholog is H3GMF2 (41 bits away from this cluster)

Group of orthologs #855. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:118

Q75BV1              	100.00%		H3GA88              	100.00%
Bootstrap support for Q75BV1 as seed ortholog is 99%.
Bootstrap support for H3GA88 as seed ortholog is 99%.

Group of orthologs #856. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.ramorum:55

Q75AX4              	100.00%		H3GBX3              	100.00%
Bootstrap support for Q75AX4 as seed ortholog is 100%.
Bootstrap support for H3GBX3 as seed ortholog is 98%.

Group of orthologs #857. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 P.ramorum:189

Q75EN6              	100.00%		H3GJB8              	100.00%
Bootstrap support for Q75EN6 as seed ortholog is 100%.
Bootstrap support for H3GJB8 as seed ortholog is 100%.

Group of orthologs #858. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 P.ramorum:188

Q758L5              	100.00%		H3G997              	100.00%
Bootstrap support for Q758L5 as seed ortholog is 100%.
Bootstrap support for H3G997 as seed ortholog is 100%.

Group of orthologs #859. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 P.ramorum:188

Q75DM9              	100.00%		H3GW62              	100.00%
Bootstrap support for Q75DM9 as seed ortholog is 100%.
Bootstrap support for H3GW62 as seed ortholog is 100%.

Group of orthologs #860. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 P.ramorum:188

Q75F75              	100.00%		H3GZ80              	100.00%
Bootstrap support for Q75F75 as seed ortholog is 100%.
Bootstrap support for H3GZ80 as seed ortholog is 100%.

Group of orthologs #861. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:74

Q75BN2              	100.00%		H3GFH2              	100.00%
                    	       		H3GE39              	5.21%
Bootstrap support for Q75BN2 as seed ortholog is 89%.
Bootstrap support for H3GFH2 as seed ortholog is 98%.

Group of orthologs #862. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.ramorum:187

Q759D1              	100.00%		H3G7K0              	100.00%
Bootstrap support for Q759D1 as seed ortholog is 100%.
Bootstrap support for H3G7K0 as seed ortholog is 100%.

Group of orthologs #863. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.ramorum:187

Q75E78              	100.00%		H3GG46              	100.00%
Bootstrap support for Q75E78 as seed ortholog is 100%.
Bootstrap support for H3GG46 as seed ortholog is 100%.

Group of orthologs #864. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 P.ramorum:186

Q74ZL4              	100.00%		H3GAL3              	100.00%
Q757L4              	98.53%		H3GAL2              	87.78%
Bootstrap support for Q74ZL4 as seed ortholog is 100%.
Bootstrap support for H3GAL3 as seed ortholog is 100%.

Group of orthologs #865. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 P.ramorum:186

Q757L7              	100.00%		H3HBU7              	100.00%
                    	       		H3GWF5              	7.69%
Bootstrap support for Q757L7 as seed ortholog is 100%.
Bootstrap support for H3HBU7 as seed ortholog is 100%.

Group of orthologs #866. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 P.ramorum:186

Q75F96              	100.00%		H3GBM4              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for H3GBM4 as seed ortholog is 100%.

Group of orthologs #867. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 P.ramorum:41

Q752M5              	100.00%		H3GTG5              	100.00%
Bootstrap support for Q752M5 as seed ortholog is 100%.
Bootstrap support for H3GTG5 as seed ortholog is 92%.

Group of orthologs #868. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:185

Q757B5              	100.00%		H3G8C5              	100.00%
Bootstrap support for Q757B5 as seed ortholog is 100%.
Bootstrap support for H3G8C5 as seed ortholog is 100%.

Group of orthologs #869. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:134

Q757A4              	100.00%		H3GAY3              	100.00%
Bootstrap support for Q757A4 as seed ortholog is 100%.
Bootstrap support for H3GAY3 as seed ortholog is 100%.

Group of orthologs #870. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:69

Q75B41              	100.00%		H3G8V3              	100.00%
Bootstrap support for Q75B41 as seed ortholog is 98%.
Bootstrap support for H3G8V3 as seed ortholog is 95%.

Group of orthologs #871. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:8

Q75DD1              	100.00%		H3G8V0              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for H3G8V0 as seed ortholog is 66%.
Alternative seed ortholog is H3HCR6 (8 bits away from this cluster)

Group of orthologs #872. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:185

Q757Z6              	100.00%		H3GFJ9              	100.00%
Bootstrap support for Q757Z6 as seed ortholog is 100%.
Bootstrap support for H3GFJ9 as seed ortholog is 100%.

Group of orthologs #873. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:185

Q75AS7              	100.00%		H3GFQ7              	100.00%
Bootstrap support for Q75AS7 as seed ortholog is 100%.
Bootstrap support for H3GFQ7 as seed ortholog is 100%.

Group of orthologs #874. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.ramorum:185

Q755W8              	100.00%		H3GJM3              	100.00%
Bootstrap support for Q755W8 as seed ortholog is 100%.
Bootstrap support for H3GJM3 as seed ortholog is 100%.

Group of orthologs #875. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 P.ramorum:184

Q75AV7              	100.00%		H3H080              	100.00%
                    	       		H3H829              	99.40%
Bootstrap support for Q75AV7 as seed ortholog is 100%.
Bootstrap support for H3H080 as seed ortholog is 100%.

Group of orthologs #876. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 P.ramorum:184

Q756G4              	100.00%		H3G5M6              	100.00%
Bootstrap support for Q756G4 as seed ortholog is 100%.
Bootstrap support for H3G5M6 as seed ortholog is 100%.

Group of orthologs #877. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 P.ramorum:184

Q751F8              	100.00%		H3GYB8              	100.00%
Bootstrap support for Q751F8 as seed ortholog is 100%.
Bootstrap support for H3GYB8 as seed ortholog is 100%.

Group of orthologs #878. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:2 P.ramorum:183

Q755G4              	100.00%		H3G953              	100.00%
                    	       		H3G954              	100.00%
Bootstrap support for Q755G4 as seed ortholog is 54%.
Alternative seed ortholog is Q757T6 (2 bits away from this cluster)
Bootstrap support for H3G953 as seed ortholog is 100%.
Bootstrap support for H3G954 as seed ortholog is 100%.

Group of orthologs #879. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 P.ramorum:183

Q752C7              	100.00%		H3GGX4              	100.00%
Bootstrap support for Q752C7 as seed ortholog is 100%.
Bootstrap support for H3GGX4 as seed ortholog is 100%.

Group of orthologs #880. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 P.ramorum:183

Q75C84              	100.00%		H3GG33              	100.00%
Bootstrap support for Q75C84 as seed ortholog is 100%.
Bootstrap support for H3GG33 as seed ortholog is 100%.

Group of orthologs #881. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 P.ramorum:183

Q757B6              	100.00%		H3GMD4              	100.00%
Bootstrap support for Q757B6 as seed ortholog is 100%.
Bootstrap support for H3GMD4 as seed ortholog is 100%.

Group of orthologs #882. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 P.ramorum:183

Q75BZ0              	100.00%		H3GY72              	100.00%
Bootstrap support for Q75BZ0 as seed ortholog is 100%.
Bootstrap support for H3GY72 as seed ortholog is 100%.

Group of orthologs #883. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 P.ramorum:84

Q758C2              	100.00%		H3HED1              	100.00%
Bootstrap support for Q758C2 as seed ortholog is 100%.
Bootstrap support for H3HED1 as seed ortholog is 99%.

Group of orthologs #884. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.ramorum:182

Q74ZY1              	100.00%		H3GR59              	100.00%
Q74ZI9              	100.00%		H3H1Q0              	100.00%
                    	       		H3GP17              	100.00%
                    	       		H3GR68              	71.30%
                    	       		H3GQF2              	69.72%
                    	       		H3GR58              	35.39%
Bootstrap support for Q74ZY1 as seed ortholog is 100%.
Bootstrap support for Q74ZI9 as seed ortholog is 100%.
Bootstrap support for H3GR59 as seed ortholog is 100%.
Bootstrap support for H3H1Q0 as seed ortholog is 100%.
Bootstrap support for H3GP17 as seed ortholog is 100%.

Group of orthologs #885. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:6 P.ramorum:38

Q75CK3              	100.00%		H3G9M6              	100.00%
                    	       		H3G8G7              	5.99%
Bootstrap support for Q75CK3 as seed ortholog is 40%.
Alternative seed ortholog is Q75F92 (6 bits away from this cluster)
Bootstrap support for H3G9M6 as seed ortholog is 94%.

Group of orthologs #886. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.ramorum:182

Q755X2              	100.00%		H3G8X4              	100.00%
Bootstrap support for Q755X2 as seed ortholog is 100%.
Bootstrap support for H3G8X4 as seed ortholog is 100%.

Group of orthologs #887. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.ramorum:182

Q754F1              	100.00%		H3GY76              	100.00%
Bootstrap support for Q754F1 as seed ortholog is 100%.
Bootstrap support for H3GY76 as seed ortholog is 100%.

Group of orthologs #888. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q75C44              	100.00%		H3GFG5              	100.00%
Q75C14              	14.68%		
Bootstrap support for Q75C44 as seed ortholog is 100%.
Bootstrap support for H3GFG5 as seed ortholog is 100%.

Group of orthologs #889. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q759V2              	100.00%		H3HDF6              	100.00%
Q75AW2              	14.45%		
Bootstrap support for Q759V2 as seed ortholog is 100%.
Bootstrap support for H3HDF6 as seed ortholog is 100%.

Group of orthologs #890. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q75C07              	100.00%		H3G6D6              	100.00%
Bootstrap support for Q75C07 as seed ortholog is 100%.
Bootstrap support for H3G6D6 as seed ortholog is 100%.

Group of orthologs #891. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q75AP9              	100.00%		H3G899              	100.00%
Bootstrap support for Q75AP9 as seed ortholog is 100%.
Bootstrap support for H3G899 as seed ortholog is 100%.

Group of orthologs #892. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q754X5              	100.00%		H3GCS0              	100.00%
Bootstrap support for Q754X5 as seed ortholog is 100%.
Bootstrap support for H3GCS0 as seed ortholog is 100%.

Group of orthologs #893. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:135

Q74ZP3              	100.00%		H3GR42              	100.00%
Bootstrap support for Q74ZP3 as seed ortholog is 100%.
Bootstrap support for H3GR42 as seed ortholog is 99%.

Group of orthologs #894. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q75CA3              	100.00%		H3GQD5              	100.00%
Bootstrap support for Q75CA3 as seed ortholog is 100%.
Bootstrap support for H3GQD5 as seed ortholog is 100%.

Group of orthologs #895. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:181

Q758V1              	100.00%		H3GZH2              	100.00%
Bootstrap support for Q758V1 as seed ortholog is 100%.
Bootstrap support for H3GZH2 as seed ortholog is 100%.

Group of orthologs #896. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.ramorum:28

Q75EY4              	100.00%		H3H1Q3              	100.00%
Bootstrap support for Q75EY4 as seed ortholog is 100%.
Bootstrap support for H3H1Q3 as seed ortholog is 85%.

Group of orthologs #897. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 P.ramorum:180

Q751U6              	100.00%		H3G5C9              	100.00%
Bootstrap support for Q751U6 as seed ortholog is 100%.
Bootstrap support for H3G5C9 as seed ortholog is 100%.

Group of orthologs #898. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.ramorum:180

Q758U5              	100.00%		H3G940              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for H3G940 as seed ortholog is 100%.

Group of orthologs #899. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 P.ramorum:179

Q757U9              	100.00%		H3G702              	100.00%
Bootstrap support for Q757U9 as seed ortholog is 100%.
Bootstrap support for H3G702 as seed ortholog is 100%.

Group of orthologs #900. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 P.ramorum:71

Q757C0              	100.00%		H3G895              	100.00%
Bootstrap support for Q757C0 as seed ortholog is 100%.
Bootstrap support for H3G895 as seed ortholog is 98%.

Group of orthologs #901. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:61

Q75DP0              	100.00%		H3G7P2              	100.00%
Bootstrap support for Q75DP0 as seed ortholog is 96%.
Bootstrap support for H3G7P2 as seed ortholog is 95%.

Group of orthologs #902. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 P.ramorum:179

Q759Y5              	100.00%		H3GHM1              	100.00%
Bootstrap support for Q759Y5 as seed ortholog is 100%.
Bootstrap support for H3GHM1 as seed ortholog is 100%.

Group of orthologs #903. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.ramorum:178

O74267              	100.00%		H3GFB2              	100.00%
Q74ZK0              	25.59%		H3G779              	63.33%
Bootstrap support for O74267 as seed ortholog is 100%.
Bootstrap support for H3GFB2 as seed ortholog is 100%.

Group of orthologs #904. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.ramorum:178

Q75AM4              	100.00%		H3G9D8              	100.00%
Bootstrap support for Q75AM4 as seed ortholog is 100%.
Bootstrap support for H3G9D8 as seed ortholog is 100%.

Group of orthologs #905. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.ramorum:178

Q75CJ3              	100.00%		H3GDM8              	100.00%
Bootstrap support for Q75CJ3 as seed ortholog is 100%.
Bootstrap support for H3GDM8 as seed ortholog is 100%.

Group of orthologs #906. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.ramorum:91

Q75BD0              	100.00%		H3H0Y8              	100.00%
Bootstrap support for Q75BD0 as seed ortholog is 100%.
Bootstrap support for H3H0Y8 as seed ortholog is 99%.

Group of orthologs #907. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:177

Q759X6              	100.00%		H3GFJ2              	100.00%
                    	       		H3G8J1              	79.74%
Bootstrap support for Q759X6 as seed ortholog is 100%.
Bootstrap support for H3GFJ2 as seed ortholog is 100%.

Group of orthologs #908. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:100

Q75BN3              	100.00%		H3G955              	100.00%
Bootstrap support for Q75BN3 as seed ortholog is 100%.
Bootstrap support for H3G955 as seed ortholog is 98%.

Group of orthologs #909. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:177

Q75F43              	100.00%		H3GG45              	100.00%
Bootstrap support for Q75F43 as seed ortholog is 100%.
Bootstrap support for H3GG45 as seed ortholog is 100%.

Group of orthologs #910. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:177

Q75E64              	100.00%		H3GHC2              	100.00%
Bootstrap support for Q75E64 as seed ortholog is 96%.
Bootstrap support for H3GHC2 as seed ortholog is 100%.

Group of orthologs #911. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:177

Q754X9              	100.00%		H3GR01              	100.00%
Bootstrap support for Q754X9 as seed ortholog is 100%.
Bootstrap support for H3GR01 as seed ortholog is 100%.

Group of orthologs #912. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:177

Q755X7              	100.00%		H3GSX0              	100.00%
Bootstrap support for Q755X7 as seed ortholog is 100%.
Bootstrap support for H3GSX0 as seed ortholog is 100%.

Group of orthologs #913. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 P.ramorum:177

Q75F60              	100.00%		H3GV69              	100.00%
Bootstrap support for Q75F60 as seed ortholog is 100%.
Bootstrap support for H3GV69 as seed ortholog is 100%.

Group of orthologs #914. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 P.ramorum:176

Q75DA5              	100.00%		H3GB12              	100.00%
                    	       		H3G596              	89.01%
Bootstrap support for Q75DA5 as seed ortholog is 100%.
Bootstrap support for H3GB12 as seed ortholog is 100%.

Group of orthologs #915. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:13 P.ramorum:176

Q75C30              	100.00%		H3HEG2              	100.00%
                    	       		H3G9J2              	6.18%
Bootstrap support for Q75C30 as seed ortholog is 63%.
Alternative seed ortholog is Q74ZN5 (13 bits away from this cluster)
Bootstrap support for H3HEG2 as seed ortholog is 100%.

Group of orthologs #916. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 P.ramorum:59

Q74Z38              	100.00%		H3G8P5              	100.00%
Bootstrap support for Q74Z38 as seed ortholog is 100%.
Bootstrap support for H3G8P5 as seed ortholog is 97%.

Group of orthologs #917. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 P.ramorum:176

Q75CR9              	100.00%		H3GAS9              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for H3GAS9 as seed ortholog is 100%.

Group of orthologs #918. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.ramorum:175

Q758B7              	100.00%		H3GTI2              	100.00%
Q757G3              	7.76%		
Bootstrap support for Q758B7 as seed ortholog is 100%.
Bootstrap support for H3GTI2 as seed ortholog is 100%.

Group of orthologs #919. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.ramorum:175

Q75CB3              	100.00%		H3GRP7              	100.00%
Q753H5              	19.31%		
Bootstrap support for Q75CB3 as seed ortholog is 99%.
Bootstrap support for H3GRP7 as seed ortholog is 100%.

Group of orthologs #920. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.ramorum:175

Q74ZF7              	100.00%		H3GBV9              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for H3GBV9 as seed ortholog is 100%.

Group of orthologs #921. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.ramorum:175

Q75CJ5              	100.00%		H3G9W8              	100.00%
Bootstrap support for Q75CJ5 as seed ortholog is 100%.
Bootstrap support for H3G9W8 as seed ortholog is 100%.

Group of orthologs #922. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:175

Q75DL6              	100.00%		H3G9P1              	100.00%
Bootstrap support for Q75DL6 as seed ortholog is 99%.
Bootstrap support for H3G9P1 as seed ortholog is 100%.

Group of orthologs #923. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.ramorum:175

Q75DA3              	100.00%		H3HB09              	100.00%
Bootstrap support for Q75DA3 as seed ortholog is 100%.
Bootstrap support for H3HB09 as seed ortholog is 100%.

Group of orthologs #924. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:99

Q756D6              	100.00%		H3GE17              	100.00%
                    	       		H3HBB0              	22.74%
Bootstrap support for Q756D6 as seed ortholog is 100%.
Bootstrap support for H3GE17 as seed ortholog is 99%.

Group of orthologs #925. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:174

Q751M0              	100.00%		H3G9W3              	100.00%
Bootstrap support for Q751M0 as seed ortholog is 100%.
Bootstrap support for H3G9W3 as seed ortholog is 100%.

Group of orthologs #926. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:174

Q756I6              	100.00%		H3G8A3              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for H3G8A3 as seed ortholog is 100%.

Group of orthologs #927. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:174

Q755Z0              	100.00%		H3GFF5              	100.00%
Bootstrap support for Q755Z0 as seed ortholog is 100%.
Bootstrap support for H3GFF5 as seed ortholog is 100%.

Group of orthologs #928. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.ramorum:174

Q753I2              	100.00%		H3H534              	100.00%
Bootstrap support for Q753I2 as seed ortholog is 100%.
Bootstrap support for H3H534 as seed ortholog is 100%.

Group of orthologs #929. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.ramorum:173

Q756V2              	100.00%		H3G8Y2              	100.00%
                    	       		H3H2X8              	47.47%
Bootstrap support for Q756V2 as seed ortholog is 100%.
Bootstrap support for H3G8Y2 as seed ortholog is 100%.

Group of orthologs #930. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.ramorum:173

Q756U0              	100.00%		H3H002              	100.00%
                    	       		H3H000              	99.56%
Bootstrap support for Q756U0 as seed ortholog is 100%.
Bootstrap support for H3H002 as seed ortholog is 100%.

Group of orthologs #931. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.ramorum:173

Q75D37              	100.00%		H3G552              	100.00%
Bootstrap support for Q75D37 as seed ortholog is 100%.
Bootstrap support for H3G552 as seed ortholog is 100%.

Group of orthologs #932. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.ramorum:173

Q757U0              	100.00%		H3GGY8              	100.00%
Bootstrap support for Q757U0 as seed ortholog is 100%.
Bootstrap support for H3GGY8 as seed ortholog is 100%.

Group of orthologs #933. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.ramorum:173

Q758X9              	100.00%		H3HC45              	100.00%
Bootstrap support for Q758X9 as seed ortholog is 100%.
Bootstrap support for H3HC45 as seed ortholog is 100%.

Group of orthologs #934. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 P.ramorum:68

Q75EC8              	100.00%		H3G5F8              	100.00%
Q758I2              	12.37%		H3G4Z0              	54.85%
                    	       		H3G518              	51.22%
                    	       		H3G8U3              	46.13%
Bootstrap support for Q75EC8 as seed ortholog is 100%.
Bootstrap support for H3G5F8 as seed ortholog is 89%.

Group of orthologs #935. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 P.ramorum:172

Q74ZP9              	100.00%		H3GIG8              	100.00%
Bootstrap support for Q74ZP9 as seed ortholog is 100%.
Bootstrap support for H3GIG8 as seed ortholog is 100%.

Group of orthologs #936. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.ramorum:82

Q754M0              	100.00%		H3G6M2              	100.00%
Bootstrap support for Q754M0 as seed ortholog is 100%.
Bootstrap support for H3G6M2 as seed ortholog is 99%.

Group of orthologs #937. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.ramorum:171

Q752Z9              	100.00%		H3G9Z9              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for H3G9Z9 as seed ortholog is 100%.

Group of orthologs #938. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.ramorum:171

Q753H0              	100.00%		H3GJ86              	100.00%
Bootstrap support for Q753H0 as seed ortholog is 100%.
Bootstrap support for H3GJ86 as seed ortholog is 100%.

Group of orthologs #939. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:68

Q754D9              	100.00%		H3HAS1              	100.00%
Bootstrap support for Q754D9 as seed ortholog is 99%.
Bootstrap support for H3HAS1 as seed ortholog is 95%.

Group of orthologs #940. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:39 P.ramorum:171

Q75CH2              	100.00%		H3H5E8              	100.00%
Bootstrap support for Q75CH2 as seed ortholog is 75%.
Bootstrap support for H3H5E8 as seed ortholog is 100%.

Group of orthologs #941. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.ramorum:171

Q75CW4              	100.00%		H3HA86              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for H3HA86 as seed ortholog is 100%.

Group of orthologs #942. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:81

Q75BX2              	100.00%		H3GN73              	100.00%
                    	       		H3GN83              	55.29%
                    	       		H3GN80              	40.81%
Bootstrap support for Q75BX2 as seed ortholog is 100%.
Bootstrap support for H3GN73 as seed ortholog is 97%.

Group of orthologs #943. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:170

Q752B3              	100.00%		H3G6D8              	100.00%
Bootstrap support for Q752B3 as seed ortholog is 100%.
Bootstrap support for H3G6D8 as seed ortholog is 100%.

Group of orthologs #944. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:170

Q755M8              	100.00%		H3G7A1              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for H3G7A1 as seed ortholog is 100%.

Group of orthologs #945. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:170

Q751L6              	100.00%		H3GE42              	100.00%
Bootstrap support for Q751L6 as seed ortholog is 100%.
Bootstrap support for H3GE42 as seed ortholog is 100%.

Group of orthologs #946. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:170

Q75AT6              	100.00%		H3GQX2              	100.00%
Bootstrap support for Q75AT6 as seed ortholog is 100%.
Bootstrap support for H3GQX2 as seed ortholog is 100%.

Group of orthologs #947. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:170

Q757U7              	100.00%		H3GTC8              	100.00%
Bootstrap support for Q757U7 as seed ortholog is 100%.
Bootstrap support for H3GTC8 as seed ortholog is 100%.

Group of orthologs #948. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.ramorum:170

Q755F1              	100.00%		H3HCI3              	100.00%
Bootstrap support for Q755F1 as seed ortholog is 100%.
Bootstrap support for H3HCI3 as seed ortholog is 100%.

Group of orthologs #949. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:169

Q757L5              	100.00%		H3GGB9              	100.00%
                    	       		H3HD46              	16.55%
Bootstrap support for Q757L5 as seed ortholog is 100%.
Bootstrap support for H3GGB9 as seed ortholog is 100%.

Group of orthologs #950. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:169

Q751M1              	100.00%		H3G8U9              	100.00%
Bootstrap support for Q751M1 as seed ortholog is 100%.
Bootstrap support for H3G8U9 as seed ortholog is 100%.

Group of orthologs #951. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:169

Q75C46              	100.00%		H3G7K5              	100.00%
Bootstrap support for Q75C46 as seed ortholog is 99%.
Bootstrap support for H3G7K5 as seed ortholog is 100%.

Group of orthologs #952. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:169

Q757X1              	100.00%		H3GGK3              	100.00%
Bootstrap support for Q757X1 as seed ortholog is 100%.
Bootstrap support for H3GGK3 as seed ortholog is 100%.

Group of orthologs #953. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:118

Q755K1              	100.00%		H3GPC6              	100.00%
Bootstrap support for Q755K1 as seed ortholog is 100%.
Bootstrap support for H3GPC6 as seed ortholog is 99%.

Group of orthologs #954. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.ramorum:169

Q75CA4              	100.00%		H3HDA1              	100.00%
Bootstrap support for Q75CA4 as seed ortholog is 100%.
Bootstrap support for H3HDA1 as seed ortholog is 100%.

Group of orthologs #955. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:168

Q753F6              	100.00%		H3G763              	100.00%
Bootstrap support for Q753F6 as seed ortholog is 100%.
Bootstrap support for H3G763 as seed ortholog is 100%.

Group of orthologs #956. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.ramorum:122

Q752N2              	100.00%		H3G858              	100.00%
Bootstrap support for Q752N2 as seed ortholog is 99%.
Bootstrap support for H3G858 as seed ortholog is 99%.

Group of orthologs #957. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:168

Q75BJ3              	100.00%		H3G4Y0              	100.00%
Bootstrap support for Q75BJ3 as seed ortholog is 100%.
Bootstrap support for H3G4Y0 as seed ortholog is 100%.

Group of orthologs #958. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:168

Q750N2              	100.00%		H3GJE0              	100.00%
Bootstrap support for Q750N2 as seed ortholog is 100%.
Bootstrap support for H3GJE0 as seed ortholog is 100%.

Group of orthologs #959. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:168

Q758C3              	100.00%		H3GX09              	100.00%
Bootstrap support for Q758C3 as seed ortholog is 100%.
Bootstrap support for H3GX09 as seed ortholog is 100%.

Group of orthologs #960. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:102

Q75AY5              	100.00%		H3GWT2              	100.00%
Bootstrap support for Q75AY5 as seed ortholog is 100%.
Bootstrap support for H3GWT2 as seed ortholog is 99%.

Group of orthologs #961. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.ramorum:168

Q75B62              	100.00%		H3HCD6              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for H3HCD6 as seed ortholog is 100%.

Group of orthologs #962. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:16 P.ramorum:58

Q751L2              	100.00%		H3GI43              	100.00%
                    	       		H3G8N2              	11.40%
Bootstrap support for Q751L2 as seed ortholog is 67%.
Alternative seed ortholog is Q75CE7 (16 bits away from this cluster)
Bootstrap support for H3GI43 as seed ortholog is 96%.

Group of orthologs #963. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.ramorum:167

Q757Z7              	100.00%		H3G8X7              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for H3G8X7 as seed ortholog is 100%.

Group of orthologs #964. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.ramorum:167

Q755S0              	100.00%		H3GC46              	100.00%
Bootstrap support for Q755S0 as seed ortholog is 100%.
Bootstrap support for H3GC46 as seed ortholog is 100%.

Group of orthologs #965. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.ramorum:167

Q75AA8              	100.00%		H3G9D9              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for H3G9D9 as seed ortholog is 100%.

Group of orthologs #966. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:16 P.ramorum:17

Q75C02              	100.00%		H3GTD1              	100.00%
Bootstrap support for Q75C02 as seed ortholog is 65%.
Alternative seed ortholog is Q75BS5 (16 bits away from this cluster)
Bootstrap support for H3GTD1 as seed ortholog is 67%.
Alternative seed ortholog is H3G5J1 (17 bits away from this cluster)

Group of orthologs #967. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.ramorum:12

Q75EA9              	100.00%		H3GUR3              	100.00%
Bootstrap support for Q75EA9 as seed ortholog is 100%.
Bootstrap support for H3GUR3 as seed ortholog is 39%.
Alternative seed ortholog is H3GDZ7 (12 bits away from this cluster)

Group of orthologs #968. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q75A12              	100.00%		H3G8T7              	100.00%
                    	       		H3G8T6              	72.21%
Bootstrap support for Q75A12 as seed ortholog is 100%.
Bootstrap support for H3G8T7 as seed ortholog is 100%.

Group of orthologs #969. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q74ZP6              	100.00%		H3G5K6              	100.00%
Bootstrap support for Q74ZP6 as seed ortholog is 100%.
Bootstrap support for H3G5K6 as seed ortholog is 100%.

Group of orthologs #970. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q74ZA3              	100.00%		H3G610              	100.00%
Bootstrap support for Q74ZA3 as seed ortholog is 100%.
Bootstrap support for H3G610 as seed ortholog is 100%.

Group of orthologs #971. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q750D1              	100.00%		H3GD20              	100.00%
Bootstrap support for Q750D1 as seed ortholog is 100%.
Bootstrap support for H3GD20 as seed ortholog is 100%.

Group of orthologs #972. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q758M8              	100.00%		H3GEK5              	100.00%
Bootstrap support for Q758M8 as seed ortholog is 100%.
Bootstrap support for H3GEK5 as seed ortholog is 100%.

Group of orthologs #973. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:81

Q75A60              	100.00%		H3GTD3              	100.00%
Bootstrap support for Q75A60 as seed ortholog is 99%.
Bootstrap support for H3GTD3 as seed ortholog is 99%.

Group of orthologs #974. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q752B2              	100.00%		H3HC32              	100.00%
Bootstrap support for Q752B2 as seed ortholog is 100%.
Bootstrap support for H3HC32 as seed ortholog is 100%.

Group of orthologs #975. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.ramorum:166

Q75C61              	100.00%		H3HD26              	100.00%
Bootstrap support for Q75C61 as seed ortholog is 100%.
Bootstrap support for H3HD26 as seed ortholog is 100%.

Group of orthologs #976. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:98

Q750T2              	100.00%		H3GG30              	100.00%
                    	       		H3G8K9              	87.10%
                    	       		H3GUN3              	58.47%
Bootstrap support for Q750T2 as seed ortholog is 100%.
Bootstrap support for H3GG30 as seed ortholog is 99%.

Group of orthologs #977. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:165

Q753F8              	100.00%		H3G9M1              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for H3G9M1 as seed ortholog is 100%.

Group of orthologs #978. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:165

Q753R8              	100.00%		H3GAQ2              	100.00%
Bootstrap support for Q753R8 as seed ortholog is 100%.
Bootstrap support for H3GAQ2 as seed ortholog is 100%.

Group of orthologs #979. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:165

Q759B6              	100.00%		H3G7Z2              	100.00%
Bootstrap support for Q759B6 as seed ortholog is 100%.
Bootstrap support for H3G7Z2 as seed ortholog is 100%.

Group of orthologs #980. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:25 P.ramorum:76

Q75DG7              	100.00%		H3GA22              	100.00%
Bootstrap support for Q75DG7 as seed ortholog is 83%.
Bootstrap support for H3GA22 as seed ortholog is 99%.

Group of orthologs #981. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:165

Q754U3              	100.00%		H3GNT1              	100.00%
Bootstrap support for Q754U3 as seed ortholog is 100%.
Bootstrap support for H3GNT1 as seed ortholog is 100%.

Group of orthologs #982. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:165

Q755K9              	100.00%		H3GZK8              	100.00%
Bootstrap support for Q755K9 as seed ortholog is 100%.
Bootstrap support for H3GZK8 as seed ortholog is 100%.

Group of orthologs #983. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.ramorum:165

Q75EL4              	100.00%		H3HBA4              	100.00%
Bootstrap support for Q75EL4 as seed ortholog is 100%.
Bootstrap support for H3HBA4 as seed ortholog is 100%.

Group of orthologs #984. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 P.ramorum:164

Q753N0              	100.00%		H3GAM8              	100.00%
Bootstrap support for Q753N0 as seed ortholog is 100%.
Bootstrap support for H3GAM8 as seed ortholog is 100%.

Group of orthologs #985. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.ramorum:164

Q75BI3              	100.00%		H3HB56              	100.00%
Bootstrap support for Q75BI3 as seed ortholog is 89%.
Bootstrap support for H3HB56 as seed ortholog is 100%.

Group of orthologs #986. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:163

Q75E31              	100.00%		H3G7U0              	100.00%
Bootstrap support for Q75E31 as seed ortholog is 100%.
Bootstrap support for H3G7U0 as seed ortholog is 100%.

Group of orthologs #987. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:31

Q754Y9              	100.00%		H3GIS8              	100.00%
Bootstrap support for Q754Y9 as seed ortholog is 100%.
Bootstrap support for H3GIS8 as seed ortholog is 88%.

Group of orthologs #988. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:163

Q75ET0              	100.00%		H3GAV6              	100.00%
Bootstrap support for Q75ET0 as seed ortholog is 100%.
Bootstrap support for H3GAV6 as seed ortholog is 100%.

Group of orthologs #989. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:163

Q758X6              	100.00%		H3GHE9              	100.00%
Bootstrap support for Q758X6 as seed ortholog is 100%.
Bootstrap support for H3GHE9 as seed ortholog is 100%.

Group of orthologs #990. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:163

Q75AT1              	100.00%		H3GHG9              	100.00%
Bootstrap support for Q75AT1 as seed ortholog is 100%.
Bootstrap support for H3GHG9 as seed ortholog is 100%.

Group of orthologs #991. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:63

Q750M1              	100.00%		H3GS89              	100.00%
Bootstrap support for Q750M1 as seed ortholog is 87%.
Bootstrap support for H3GS89 as seed ortholog is 96%.

Group of orthologs #992. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:47

Q755C8              	100.00%		H3GSS2              	100.00%
Bootstrap support for Q755C8 as seed ortholog is 100%.
Bootstrap support for H3GSS2 as seed ortholog is 52%.
Alternative seed ortholog is H3GMB8 (47 bits away from this cluster)

Group of orthologs #993. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.ramorum:109

Q756A4              	100.00%		H3GW85              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for H3GW85 as seed ortholog is 99%.

Group of orthologs #994. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:6 P.ramorum:107

Q75B13              	100.00%		H3G969              	100.00%
                    	       		H3G768              	11.03%
Bootstrap support for Q75B13 as seed ortholog is 57%.
Alternative seed ortholog is Q75BP8 (6 bits away from this cluster)
Bootstrap support for H3G969 as seed ortholog is 100%.

Group of orthologs #995. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 P.ramorum:162

Q754N8              	100.00%		H3GAG5              	100.00%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for H3GAG5 as seed ortholog is 100%.

Group of orthologs #996. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 P.ramorum:162

Q755G8              	100.00%		H3GGU4              	100.00%
Bootstrap support for Q755G8 as seed ortholog is 100%.
Bootstrap support for H3GGU4 as seed ortholog is 100%.

Group of orthologs #997. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:78

Q75B37              	100.00%		H3GID6              	100.00%
Bootstrap support for Q75B37 as seed ortholog is 99%.
Bootstrap support for H3GID6 as seed ortholog is 99%.

Group of orthologs #998. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.ramorum:161

Q8J1F8              	100.00%		H3GA01              	100.00%
Q74ZL5              	75.61%		H3G9Z2              	83.33%
Bootstrap support for Q8J1F8 as seed ortholog is 100%.
Bootstrap support for H3GA01 as seed ortholog is 100%.

Group of orthologs #999. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.ramorum:161

Q754R9              	100.00%		H3G956              	100.00%
Bootstrap support for Q754R9 as seed ortholog is 100%.
Bootstrap support for H3G956 as seed ortholog is 100%.

Group of orthologs #1000. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.ramorum:161

Q75CC6              	100.00%		H3G6D5              	100.00%
Bootstrap support for Q75CC6 as seed ortholog is 100%.
Bootstrap support for H3G6D5 as seed ortholog is 100%.

Group of orthologs #1001. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.ramorum:111

Q75BG7              	100.00%		H3G9V1              	100.00%
Bootstrap support for Q75BG7 as seed ortholog is 100%.
Bootstrap support for H3G9V1 as seed ortholog is 100%.

Group of orthologs #1002. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 P.ramorum:160

Q751S0              	100.00%		H3G8Q0              	100.00%
Bootstrap support for Q751S0 as seed ortholog is 100%.
Bootstrap support for H3G8Q0 as seed ortholog is 100%.

Group of orthologs #1003. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 P.ramorum:160

Q757L0              	100.00%		H3GXT3              	100.00%
Bootstrap support for Q757L0 as seed ortholog is 100%.
Bootstrap support for H3GXT3 as seed ortholog is 100%.

Group of orthologs #1004. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.ramorum:110

Q75F38              	100.00%		H3G5V3              	100.00%
                    	       		H3G6E0              	44.70%
                    	       		H3GAF8              	38.64%
Bootstrap support for Q75F38 as seed ortholog is 99%.
Bootstrap support for H3G5V3 as seed ortholog is 100%.

Group of orthologs #1005. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.ramorum:159

Q757Z5              	100.00%		H3GN89              	100.00%
Q75AM0              	5.49%		
Bootstrap support for Q757Z5 as seed ortholog is 100%.
Bootstrap support for H3GN89 as seed ortholog is 100%.

Group of orthologs #1006. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.ramorum:159

Q74ZY7              	100.00%		H3GI57              	100.00%
Bootstrap support for Q74ZY7 as seed ortholog is 100%.
Bootstrap support for H3GI57 as seed ortholog is 100%.

Group of orthologs #1007. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:158

Q752C6              	100.00%		H3G7W7              	100.00%
Bootstrap support for Q752C6 as seed ortholog is 95%.
Bootstrap support for H3G7W7 as seed ortholog is 100%.

Group of orthologs #1008. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:158

Q75AV1              	100.00%		H3GA47              	100.00%
Bootstrap support for Q75AV1 as seed ortholog is 100%.
Bootstrap support for H3GA47 as seed ortholog is 100%.

Group of orthologs #1009. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:158

Q756D2              	100.00%		H3GFL4              	100.00%
Bootstrap support for Q756D2 as seed ortholog is 100%.
Bootstrap support for H3GFL4 as seed ortholog is 100%.

Group of orthologs #1010. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:158

Q75CG2              	100.00%		H3GAN1              	100.00%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for H3GAN1 as seed ortholog is 100%.

Group of orthologs #1011. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:158

Q75DP9              	100.00%		H3G9P5              	100.00%
Bootstrap support for Q75DP9 as seed ortholog is 100%.
Bootstrap support for H3G9P5 as seed ortholog is 100%.

Group of orthologs #1012. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:158

Q750L7              	100.00%		H3HCW2              	100.00%
Bootstrap support for Q750L7 as seed ortholog is 100%.
Bootstrap support for H3HCW2 as seed ortholog is 100%.

Group of orthologs #1013. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.ramorum:158

Q75C73              	100.00%		H3HB82              	100.00%
Bootstrap support for Q75C73 as seed ortholog is 100%.
Bootstrap support for H3HB82 as seed ortholog is 100%.

Group of orthologs #1014. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:109

Q754Z0              	100.00%		H3G8Z6              	100.00%
Bootstrap support for Q754Z0 as seed ortholog is 100%.
Bootstrap support for H3G8Z6 as seed ortholog is 100%.

Group of orthologs #1015. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 P.ramorum:157

Q75A80              	100.00%		H3G9X3              	100.00%
Bootstrap support for Q75A80 as seed ortholog is 100%.
Bootstrap support for H3G9X3 as seed ortholog is 100%.

Group of orthologs #1016. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

Q74Z47              	100.00%		H3G7Q8              	100.00%
Bootstrap support for Q74Z47 as seed ortholog is 100%.
Bootstrap support for H3G7Q8 as seed ortholog is 100%.

Group of orthologs #1017. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

Q750V1              	100.00%		H3GEU2              	100.00%
Bootstrap support for Q750V1 as seed ortholog is 100%.
Bootstrap support for H3GEU2 as seed ortholog is 100%.

Group of orthologs #1018. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:37 P.ramorum:22

Q75AG1              	100.00%		H3G838              	100.00%
Bootstrap support for Q75AG1 as seed ortholog is 81%.
Bootstrap support for H3G838 as seed ortholog is 84%.

Group of orthologs #1019. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

Q75EQ5              	100.00%		H3GGV9              	100.00%
Bootstrap support for Q75EQ5 as seed ortholog is 100%.
Bootstrap support for H3GGV9 as seed ortholog is 100%.

Group of orthologs #1020. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

Q75B05              	100.00%		H3GMV0              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 100%.
Bootstrap support for H3GMV0 as seed ortholog is 100%.

Group of orthologs #1021. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

Q757T8              	100.00%		H3GSP4              	100.00%
Bootstrap support for Q757T8 as seed ortholog is 100%.
Bootstrap support for H3GSP4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.ramorum:156

Q756V1              	100.00%		H3H3F5              	100.00%
Bootstrap support for Q756V1 as seed ortholog is 100%.
Bootstrap support for H3H3F5 as seed ortholog is 100%.

Group of orthologs #1023. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:95

Q759U7              	100.00%		H3H2U3              	100.00%
Bootstrap support for Q759U7 as seed ortholog is 99%.
Bootstrap support for H3H2U3 as seed ortholog is 97%.

Group of orthologs #1024. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 P.ramorum:41

Q75E33              	100.00%		H3G8N8              	100.00%
Bootstrap support for Q75E33 as seed ortholog is 100%.
Bootstrap support for H3G8N8 as seed ortholog is 90%.

Group of orthologs #1025. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 P.ramorum:155

Q757H7              	100.00%		H3HDK0              	100.00%
Bootstrap support for Q757H7 as seed ortholog is 100%.
Bootstrap support for H3HDK0 as seed ortholog is 100%.

Group of orthologs #1026. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:104

Q754B8              	100.00%		H3GEM1              	100.00%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for H3GEM1 as seed ortholog is 99%.

Group of orthologs #1027. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:154

Q756N3              	100.00%		H3GIF4              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for H3GIF4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:154

Q751H8              	100.00%		H3GQP5              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for H3GQP5 as seed ortholog is 100%.

Group of orthologs #1029. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:20

Q75CM3              	100.00%		H3GHI8              	100.00%
Bootstrap support for Q75CM3 as seed ortholog is 100%.
Bootstrap support for H3GHI8 as seed ortholog is 72%.
Alternative seed ortholog is H3GKK5 (20 bits away from this cluster)

Group of orthologs #1030. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:154

Q754L1              	100.00%		H3GRP6              	100.00%
Bootstrap support for Q754L1 as seed ortholog is 100%.
Bootstrap support for H3GRP6 as seed ortholog is 100%.

Group of orthologs #1031. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:154

Q75AL9              	100.00%		H3GY11              	100.00%
Bootstrap support for Q75AL9 as seed ortholog is 100%.
Bootstrap support for H3GY11 as seed ortholog is 100%.

Group of orthologs #1032. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.ramorum:154

Q75E84              	100.00%		H3GXV0              	100.00%
Bootstrap support for Q75E84 as seed ortholog is 100%.
Bootstrap support for H3GXV0 as seed ortholog is 100%.

Group of orthologs #1033. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:153

Q753W6              	100.00%		H3GJN3              	100.00%
                    	       		H3GJP0              	49.81%
                    	       		H3GJN4              	45.96%
                    	       		H3GJN5              	42.73%
                    	       		H3G906              	42.61%
                    	       		H3GMN4              	15.40%
Bootstrap support for Q753W6 as seed ortholog is 89%.
Bootstrap support for H3GJN3 as seed ortholog is 100%.

Group of orthologs #1034. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.ramorum:153

Q750J5              	100.00%		H3GUW0              	100.00%
                    	       		H3GY66              	8.71%
                    	       		H3HC25              	7.08%
Bootstrap support for Q750J5 as seed ortholog is 100%.
Bootstrap support for H3GUW0 as seed ortholog is 100%.

Group of orthologs #1035. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:153

Q750Q6              	100.00%		H3GWK6              	100.00%
                    	       		H3GEV2              	14.89%
Bootstrap support for Q750Q6 as seed ortholog is 83%.
Bootstrap support for H3GWK6 as seed ortholog is 100%.

Group of orthologs #1036. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.ramorum:153

Q753B5              	100.00%		H3G7A8              	100.00%
Bootstrap support for Q753B5 as seed ortholog is 100%.
Bootstrap support for H3G7A8 as seed ortholog is 100%.

Group of orthologs #1037. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.ramorum:153

Q75BB7              	100.00%		H3G7C2              	100.00%
Bootstrap support for Q75BB7 as seed ortholog is 100%.
Bootstrap support for H3G7C2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.ramorum:153

Q753Q2              	100.00%		H3GI13              	100.00%
Bootstrap support for Q753Q2 as seed ortholog is 100%.
Bootstrap support for H3GI13 as seed ortholog is 100%.

Group of orthologs #1039. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.ramorum:153

Q75DY8              	100.00%		H3GAA6              	100.00%
Bootstrap support for Q75DY8 as seed ortholog is 100%.
Bootstrap support for H3GAA6 as seed ortholog is 100%.

Group of orthologs #1040. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.ramorum:153

Q758F3              	100.00%		H3GH48              	100.00%
Bootstrap support for Q758F3 as seed ortholog is 100%.
Bootstrap support for H3GH48 as seed ortholog is 100%.

Group of orthologs #1041. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 P.ramorum:152

Q759L9              	100.00%		H3G8S1              	100.00%
Bootstrap support for Q759L9 as seed ortholog is 100%.
Bootstrap support for H3G8S1 as seed ortholog is 100%.

Group of orthologs #1042. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 P.ramorum:152

Q75BI6              	100.00%		H3H6D2              	100.00%
Bootstrap support for Q75BI6 as seed ortholog is 100%.
Bootstrap support for H3H6D2 as seed ortholog is 100%.

Group of orthologs #1043. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:151

Q759H8              	100.00%		H3G8Z1              	100.00%
                    	       		H3G9E6              	33.17%
Bootstrap support for Q759H8 as seed ortholog is 100%.
Bootstrap support for H3G8Z1 as seed ortholog is 100%.

Group of orthologs #1044. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:151

Q75D95              	100.00%		H3H3U8              	100.00%
                    	       		H3GTY4              	30.40%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for H3H3U8 as seed ortholog is 100%.

Group of orthologs #1045. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:151

Q75BC2              	100.00%		H3G5Y3              	100.00%
Bootstrap support for Q75BC2 as seed ortholog is 100%.
Bootstrap support for H3G5Y3 as seed ortholog is 100%.

Group of orthologs #1046. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:151

Q759H3              	100.00%		H3GDA7              	100.00%
Bootstrap support for Q759H3 as seed ortholog is 100%.
Bootstrap support for H3GDA7 as seed ortholog is 100%.

Group of orthologs #1047. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:151

Q75EH7              	100.00%		H3GAL1              	100.00%
Bootstrap support for Q75EH7 as seed ortholog is 100%.
Bootstrap support for H3GAL1 as seed ortholog is 100%.

Group of orthologs #1048. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:151

Q755H7              	100.00%		H3GWN5              	100.00%
Bootstrap support for Q755H7 as seed ortholog is 100%.
Bootstrap support for H3GWN5 as seed ortholog is 100%.

Group of orthologs #1049. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.ramorum:28

Q75AL3              	100.00%		H3GVS8              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for H3GVS8 as seed ortholog is 75%.

Group of orthologs #1050. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.ramorum:150

Q75EN5              	100.00%		H3GAA9              	100.00%
                    	       		H3H4U4              	9.44%
Bootstrap support for Q75EN5 as seed ortholog is 100%.
Bootstrap support for H3GAA9 as seed ortholog is 100%.

Group of orthologs #1051. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.ramorum:42

Q758L4              	100.00%		H3GCJ5              	100.00%
Bootstrap support for Q758L4 as seed ortholog is 94%.
Bootstrap support for H3GCJ5 as seed ortholog is 83%.

Group of orthologs #1052. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.ramorum:150

Q758L8              	100.00%		H3GXU2              	100.00%
Bootstrap support for Q758L8 as seed ortholog is 100%.
Bootstrap support for H3GXU2 as seed ortholog is 100%.

Group of orthologs #1053. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:149

Q75DC3              	100.00%		H3GAQ7              	100.00%
Bootstrap support for Q75DC3 as seed ortholog is 100%.
Bootstrap support for H3GAQ7 as seed ortholog is 100%.

Group of orthologs #1054. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:149

Q752G1              	100.00%		H3GP76              	100.00%
Bootstrap support for Q752G1 as seed ortholog is 100%.
Bootstrap support for H3GP76 as seed ortholog is 100%.

Group of orthologs #1055. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:149

Q754Q7              	100.00%		H3GQH7              	100.00%
Bootstrap support for Q754Q7 as seed ortholog is 100%.
Bootstrap support for H3GQH7 as seed ortholog is 100%.

Group of orthologs #1056. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.ramorum:77

Q755M7              	100.00%		H3GQF9              	100.00%
Bootstrap support for Q755M7 as seed ortholog is 100%.
Bootstrap support for H3GQF9 as seed ortholog is 97%.

Group of orthologs #1057. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:76

Q75C81              	100.00%		H3H0P3              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 99%.
Bootstrap support for H3H0P3 as seed ortholog is 99%.

Group of orthologs #1058. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.ramorum:29

Q75AD8              	100.00%		H3HBS7              	100.00%
Q75CX3              	100.00%		H3GZ93              	100.00%
Q751S4              	31.52%		H3H0M3              	60.38%
Q751P1              	31.00%		H3GJM9              	53.34%
Q75AU5              	18.33%		H3H0M9              	51.18%
Q756C0              	15.13%		H3GJN0              	47.54%
                    	       		H3GW29              	32.79%
                    	       		H3GW30              	32.41%
Bootstrap support for Q75AD8 as seed ortholog is 100%.
Bootstrap support for Q75CX3 as seed ortholog is 100%.
Bootstrap support for H3HBS7 as seed ortholog is 71%.
Alternative seed ortholog is H3GJ13 (29 bits away from this cluster)
Bootstrap support for H3GZ93 as seed ortholog is 56%.
Alternative seed ortholog is H3GJ13 (29 bits away from this cluster)

Group of orthologs #1059. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:40 P.ramorum:51

Q75AX5              	100.00%		H3H0J3              	100.00%
Q751J1              	17.43%		
Bootstrap support for Q75AX5 as seed ortholog is 62%.
Alternative seed ortholog is Q752A4 (40 bits away from this cluster)
Bootstrap support for H3H0J3 as seed ortholog is 72%.
Alternative seed ortholog is H3GGC3 (51 bits away from this cluster)

Group of orthologs #1060. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.ramorum:148

Q753G6              	100.00%		H3G5V4              	100.00%
Bootstrap support for Q753G6 as seed ortholog is 100%.
Bootstrap support for H3G5V4 as seed ortholog is 100%.

Group of orthologs #1061. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.ramorum:148

Q754W7              	100.00%		H3G6M7              	100.00%
Bootstrap support for Q754W7 as seed ortholog is 100%.
Bootstrap support for H3G6M7 as seed ortholog is 100%.

Group of orthologs #1062. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:147

Q75CI7              	100.00%		H3H297              	100.00%
                    	       		H3H296              	75.93%
                    	       		H3H298              	64.77%
                    	       		H3GAN5              	50.11%
                    	       		H3GAN8              	41.36%
                    	       		H3GAN7              	40.48%
                    	       		H3GAN6              	38.29%
                    	       		H3G9Q5              	35.23%
                    	       		H3GAN4              	34.79%
                    	       		H3H9X5              	30.63%
                    	       		H3GB18              	30.42%
                    	       		H3G9Q4              	30.20%
                    	       		H3G8F8              	29.54%
                    	       		H3GB24              	29.10%
                    	       		H3GSY9              	28.45%
                    	       		H3G9Q6              	24.29%
                    	       		H3GSY3              	24.07%
                    	       		H3G742              	24.07%
                    	       		H3HCB8              	23.63%
                    	       		H3GAJ4              	21.66%
                    	       		H3GAJ3              	21.23%
                    	       		H3G9Q3              	17.29%
                    	       		H3H741              	13.35%
                    	       		H3GSY4              	13.35%
                    	       		H3GSY8              	12.04%
                    	       		H3H8L5              	10.50%
Bootstrap support for Q75CI7 as seed ortholog is 95%.
Bootstrap support for H3H297 as seed ortholog is 100%.

Group of orthologs #1063. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:147

Q75DT2              	100.00%		H3HEG5              	100.00%
                    	       		H3H5V4              	36.69%
                    	       		H3GN35              	35.79%
                    	       		H3GG96              	32.89%
                    	       		H3GU87              	23.94%
                    	       		H3H9X2              	12.30%
Bootstrap support for Q75DT2 as seed ortholog is 100%.
Bootstrap support for H3HEG5 as seed ortholog is 100%.

Group of orthologs #1064. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:147

Q751B5              	100.00%		H3GA08              	100.00%
Bootstrap support for Q751B5 as seed ortholog is 100%.
Bootstrap support for H3GA08 as seed ortholog is 100%.

Group of orthologs #1065. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:147

Q751I7              	100.00%		H3GAD2              	100.00%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for H3GAD2 as seed ortholog is 100%.

Group of orthologs #1066. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:147

Q753E7              	100.00%		H3G9R6              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for H3G9R6 as seed ortholog is 100%.

Group of orthologs #1067. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:147

Q759W4              	100.00%		H3G8S7              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for H3G8S7 as seed ortholog is 100%.

Group of orthologs #1068. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.ramorum:147

Q75AQ4              	100.00%		H3GFE9              	100.00%
Bootstrap support for Q75AQ4 as seed ortholog is 83%.
Bootstrap support for H3GFE9 as seed ortholog is 100%.

Group of orthologs #1069. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.ramorum:147

Q75EI0              	100.00%		H3GFD8              	100.00%
Bootstrap support for Q75EI0 as seed ortholog is 100%.
Bootstrap support for H3GFD8 as seed ortholog is 100%.

Group of orthologs #1070. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.ramorum:31

Q758Y8              	100.00%		H3HEH4              	100.00%
Bootstrap support for Q758Y8 as seed ortholog is 92%.
Bootstrap support for H3HEH4 as seed ortholog is 97%.

Group of orthologs #1071. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.ramorum:147

Q75BM4              	100.00%		H3HE78              	100.00%
Bootstrap support for Q75BM4 as seed ortholog is 99%.
Bootstrap support for H3HE78 as seed ortholog is 100%.

Group of orthologs #1072. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.ramorum:146

Q74Z62              	100.00%		H3GTS8              	100.00%
                    	       		H3GFE6              	20.43%
Bootstrap support for Q74Z62 as seed ortholog is 100%.
Bootstrap support for H3GTS8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.ramorum:146

Q74ZG6              	100.00%		H3GC59              	100.00%
Bootstrap support for Q74ZG6 as seed ortholog is 100%.
Bootstrap support for H3GC59 as seed ortholog is 100%.

Group of orthologs #1074. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.ramorum:146

Q75AK5              	100.00%		H3G9V9              	100.00%
Bootstrap support for Q75AK5 as seed ortholog is 100%.
Bootstrap support for H3G9V9 as seed ortholog is 100%.

Group of orthologs #1075. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.ramorum:146

Q75CU5              	100.00%		H3G8T8              	100.00%
Bootstrap support for Q75CU5 as seed ortholog is 100%.
Bootstrap support for H3G8T8 as seed ortholog is 100%.

Group of orthologs #1076. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:26 P.ramorum:53

Q75AC6              	100.00%		H3GI19              	100.00%
Bootstrap support for Q75AC6 as seed ortholog is 74%.
Alternative seed ortholog is Q754C3 (26 bits away from this cluster)
Bootstrap support for H3GI19 as seed ortholog is 92%.

Group of orthologs #1077. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:30

Q754W2              	100.00%		H3GSC6              	100.00%
Bootstrap support for Q754W2 as seed ortholog is 97%.
Bootstrap support for H3GSC6 as seed ortholog is 69%.
Alternative seed ortholog is H3GHP8 (30 bits away from this cluster)

Group of orthologs #1078. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.ramorum:146

Q759T4              	100.00%		H3GS44              	100.00%
Bootstrap support for Q759T4 as seed ortholog is 100%.
Bootstrap support for H3GS44 as seed ortholog is 100%.

Group of orthologs #1079. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:31 P.ramorum:36

Q754C4              	100.00%		H3GBF0              	100.00%
                    	       		H3G8N6              	8.19%
Bootstrap support for Q754C4 as seed ortholog is 81%.
Bootstrap support for H3GBF0 as seed ortholog is 84%.

Group of orthologs #1080. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.ramorum:145

Q759U2              	100.00%		H3G6A1              	100.00%
Bootstrap support for Q759U2 as seed ortholog is 100%.
Bootstrap support for H3G6A1 as seed ortholog is 100%.

Group of orthologs #1081. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.ramorum:145

Q75B73              	100.00%		H3G6E8              	100.00%
Bootstrap support for Q75B73 as seed ortholog is 100%.
Bootstrap support for H3G6E8 as seed ortholog is 100%.

Group of orthologs #1082. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.ramorum:145

Q75B45              	100.00%		H3GV87              	100.00%
Bootstrap support for Q75B45 as seed ortholog is 100%.
Bootstrap support for H3GV87 as seed ortholog is 100%.

Group of orthologs #1083. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.ramorum:145

Q75F24              	100.00%		H3HBJ2              	100.00%
Bootstrap support for Q75F24 as seed ortholog is 100%.
Bootstrap support for H3HBJ2 as seed ortholog is 100%.

Group of orthologs #1084. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.ramorum:144

Q74ZQ7              	100.00%		H3HCV2              	100.00%
                    	       		H3GGS9              	15.73%
Bootstrap support for Q74ZQ7 as seed ortholog is 87%.
Bootstrap support for H3HCV2 as seed ortholog is 100%.

Group of orthologs #1085. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.ramorum:144

Q757U3              	100.00%		H3GN59              	100.00%
Bootstrap support for Q757U3 as seed ortholog is 100%.
Bootstrap support for H3GN59 as seed ortholog is 100%.

Group of orthologs #1086. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.ramorum:144

Q75EY8              	100.00%		H3GUH2              	100.00%
Bootstrap support for Q75EY8 as seed ortholog is 100%.
Bootstrap support for H3GUH2 as seed ortholog is 100%.

Group of orthologs #1087. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.ramorum:144

Q757I9              	100.00%		H3H7F2              	100.00%
Bootstrap support for Q757I9 as seed ortholog is 100%.
Bootstrap support for H3H7F2 as seed ortholog is 100%.

Group of orthologs #1088. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.ramorum:143

Q74ZM0              	100.00%		H3GI39              	100.00%
                    	       		H3HCW6              	7.68%
Bootstrap support for Q74ZM0 as seed ortholog is 100%.
Bootstrap support for H3GI39 as seed ortholog is 100%.

Group of orthologs #1089. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.ramorum:143

Q75AS8              	100.00%		H3G8P8              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for H3G8P8 as seed ortholog is 100%.

Group of orthologs #1090. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.ramorum:143

Q752B0              	100.00%		H3GH52              	100.00%
Bootstrap support for Q752B0 as seed ortholog is 100%.
Bootstrap support for H3GH52 as seed ortholog is 100%.

Group of orthologs #1091. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.ramorum:143

Q75C23              	100.00%		H3GQ87              	100.00%
Bootstrap support for Q75C23 as seed ortholog is 100%.
Bootstrap support for H3GQ87 as seed ortholog is 100%.

Group of orthologs #1092. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.ramorum:143

Q759P8              	100.00%		H3GTM3              	100.00%
Bootstrap support for Q759P8 as seed ortholog is 100%.
Bootstrap support for H3GTM3 as seed ortholog is 100%.

Group of orthologs #1093. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:6 P.ramorum:142

Q758H7              	100.00%		H3G840              	100.00%
Bootstrap support for Q758H7 as seed ortholog is 49%.
Alternative seed ortholog is Q756W6 (6 bits away from this cluster)
Bootstrap support for H3G840 as seed ortholog is 100%.

Group of orthologs #1094. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:19

Q755L0              	100.00%		H3GRD8              	100.00%
Bootstrap support for Q755L0 as seed ortholog is 94%.
Bootstrap support for H3GRD8 as seed ortholog is 68%.
Alternative seed ortholog is H3HDQ5 (19 bits away from this cluster)

Group of orthologs #1095. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 P.ramorum:142

Q750X1              	100.00%		H3GZX6              	100.00%
Bootstrap support for Q750X1 as seed ortholog is 100%.
Bootstrap support for H3GZX6 as seed ortholog is 100%.

Group of orthologs #1096. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 P.ramorum:142

Q75F23              	100.00%		H3GV05              	100.00%
Bootstrap support for Q75F23 as seed ortholog is 100%.
Bootstrap support for H3GV05 as seed ortholog is 100%.

Group of orthologs #1097. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 P.ramorum:142

Q75F63              	100.00%		H3HD68              	100.00%
Bootstrap support for Q75F63 as seed ortholog is 100%.
Bootstrap support for H3HD68 as seed ortholog is 100%.

Group of orthologs #1098. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.ramorum:141

Q751B7              	100.00%		H3GCM0              	100.00%
Bootstrap support for Q751B7 as seed ortholog is 100%.
Bootstrap support for H3GCM0 as seed ortholog is 100%.

Group of orthologs #1099. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.ramorum:141

Q75EF1              	100.00%		H3G6Z2              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for H3G6Z2 as seed ortholog is 100%.

Group of orthologs #1100. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.ramorum:141

Q75DA1              	100.00%		H3G8A6              	100.00%
Bootstrap support for Q75DA1 as seed ortholog is 100%.
Bootstrap support for H3G8A6 as seed ortholog is 100%.

Group of orthologs #1101. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.ramorum:141

Q75ER0              	100.00%		H3GVF3              	100.00%
Bootstrap support for Q75ER0 as seed ortholog is 100%.
Bootstrap support for H3GVF3 as seed ortholog is 100%.

Group of orthologs #1102. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 P.ramorum:140

Q756B3              	100.00%		H3HBR3              	100.00%
Bootstrap support for Q756B3 as seed ortholog is 100%.
Bootstrap support for H3HBR3 as seed ortholog is 100%.

Group of orthologs #1103. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.ramorum:139

Q757T0              	100.00%		H3GQD4              	100.00%
                    	       		H3HC58              	17.46%
                    	       		H3HC66              	16.72%
Bootstrap support for Q757T0 as seed ortholog is 100%.
Bootstrap support for H3GQD4 as seed ortholog is 100%.

Group of orthologs #1104. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.ramorum:139

Q754K4              	100.00%		H3G8P7              	100.00%
Bootstrap support for Q754K4 as seed ortholog is 100%.
Bootstrap support for H3G8P7 as seed ortholog is 100%.

Group of orthologs #1105. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.ramorum:139

Q75C74              	100.00%		H3GF34              	100.00%
Bootstrap support for Q75C74 as seed ortholog is 100%.
Bootstrap support for H3GF34 as seed ortholog is 100%.

Group of orthologs #1106. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:20 P.ramorum:139

Q75A20              	100.00%		H3GH98              	100.00%
Bootstrap support for Q75A20 as seed ortholog is 68%.
Alternative seed ortholog is Q755P2 (20 bits away from this cluster)
Bootstrap support for H3GH98 as seed ortholog is 100%.

Group of orthologs #1107. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:15 P.ramorum:55

Q75A82              	100.00%		H3GK99              	100.00%
Bootstrap support for Q75A82 as seed ortholog is 66%.
Alternative seed ortholog is Q754C3 (15 bits away from this cluster)
Bootstrap support for H3GK99 as seed ortholog is 93%.

Group of orthologs #1108. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.ramorum:139

Q75D86              	100.00%		H3GLC6              	100.00%
Bootstrap support for Q75D86 as seed ortholog is 100%.
Bootstrap support for H3GLC6 as seed ortholog is 100%.

Group of orthologs #1109. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:139

Q75CK4              	100.00%		H3GRS6              	100.00%
Bootstrap support for Q75CK4 as seed ortholog is 96%.
Bootstrap support for H3GRS6 as seed ortholog is 100%.

Group of orthologs #1110. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.ramorum:139

Q75C56              	100.00%		H3GWZ9              	100.00%
Bootstrap support for Q75C56 as seed ortholog is 100%.
Bootstrap support for H3GWZ9 as seed ortholog is 100%.

Group of orthologs #1111. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:33

Q9HFW2              	100.00%		H3GDN9              	100.00%
Q75DK7              	16.12%		H3H377              	9.19%
                    	       		H3GMS4              	6.19%
Bootstrap support for Q9HFW2 as seed ortholog is 100%.
Bootstrap support for H3GDN9 as seed ortholog is 82%.

Group of orthologs #1112. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q750A2              	100.00%		H3HAZ0              	100.00%
Q756H4              	100.00%		H3GCK9              	100.00%
Bootstrap support for Q750A2 as seed ortholog is 100%.
Bootstrap support for Q756H4 as seed ortholog is 100%.
Bootstrap support for H3HAZ0 as seed ortholog is 100%.
Bootstrap support for H3GCK9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q75A38              	100.00%		H3GVF6              	100.00%
Q75A37              	77.22%		
Bootstrap support for Q75A38 as seed ortholog is 100%.
Bootstrap support for H3GVF6 as seed ortholog is 100%.

Group of orthologs #1114. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q751Y7              	100.00%		H3G703              	100.00%
Bootstrap support for Q751Y7 as seed ortholog is 100%.
Bootstrap support for H3G703 as seed ortholog is 100%.

Group of orthologs #1115. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q750F1              	100.00%		H3GBE8              	100.00%
Bootstrap support for Q750F1 as seed ortholog is 100%.
Bootstrap support for H3GBE8 as seed ortholog is 100%.

Group of orthologs #1116. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q756E6              	100.00%		H3G808              	100.00%
Bootstrap support for Q756E6 as seed ortholog is 100%.
Bootstrap support for H3G808 as seed ortholog is 100%.

Group of orthologs #1117. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:138

Q757P7              	100.00%		H3GGD2              	100.00%
Bootstrap support for Q757P7 as seed ortholog is 85%.
Bootstrap support for H3GGD2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q754Z5              	100.00%		H3GV42              	100.00%
Bootstrap support for Q754Z5 as seed ortholog is 100%.
Bootstrap support for H3GV42 as seed ortholog is 100%.

Group of orthologs #1119. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q752J1              	100.00%		H3GZL1              	100.00%
Bootstrap support for Q752J1 as seed ortholog is 100%.
Bootstrap support for H3GZL1 as seed ortholog is 100%.

Group of orthologs #1120. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q74Z11              	100.00%		H3H5S3              	100.00%
Bootstrap support for Q74Z11 as seed ortholog is 100%.
Bootstrap support for H3H5S3 as seed ortholog is 100%.

Group of orthologs #1121. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.ramorum:138

Q757G9              	100.00%		H3H6K8              	100.00%
Bootstrap support for Q757G9 as seed ortholog is 100%.
Bootstrap support for H3H6K8 as seed ortholog is 100%.

Group of orthologs #1122. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.ramorum:137

Q75BW2              	100.00%		H3GKQ0              	100.00%
                    	       		H3HA78              	80.50%
Bootstrap support for Q75BW2 as seed ortholog is 100%.
Bootstrap support for H3GKQ0 as seed ortholog is 100%.

Group of orthologs #1123. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.ramorum:137

Q756T5              	100.00%		H3G7X3              	100.00%
Bootstrap support for Q756T5 as seed ortholog is 100%.
Bootstrap support for H3G7X3 as seed ortholog is 100%.

Group of orthologs #1124. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.ramorum:136

Q752A1              	100.00%		H3GZ79              	100.00%
                    	       		H3H6Q0              	56.40%
                    	       		H3H4H7              	52.22%
Bootstrap support for Q752A1 as seed ortholog is 100%.
Bootstrap support for H3GZ79 as seed ortholog is 100%.

Group of orthologs #1125. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.ramorum:38

Q755A4              	100.00%		H3GA95              	100.00%
Bootstrap support for Q755A4 as seed ortholog is 100%.
Bootstrap support for H3GA95 as seed ortholog is 82%.

Group of orthologs #1126. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.ramorum:136

Q75BM3              	100.00%		H3G8U8              	100.00%
Bootstrap support for Q75BM3 as seed ortholog is 100%.
Bootstrap support for H3G8U8 as seed ortholog is 100%.

Group of orthologs #1127. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.ramorum:136

Q754F5              	100.00%		H3GK15              	100.00%
Bootstrap support for Q754F5 as seed ortholog is 100%.
Bootstrap support for H3GK15 as seed ortholog is 100%.

Group of orthologs #1128. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.ramorum:136

Q753T9              	100.00%		H3GKF9              	100.00%
Bootstrap support for Q753T9 as seed ortholog is 100%.
Bootstrap support for H3GKF9 as seed ortholog is 100%.

Group of orthologs #1129. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.ramorum:136

Q753W3              	100.00%		H3H4G3              	100.00%
Bootstrap support for Q753W3 as seed ortholog is 100%.
Bootstrap support for H3H4G3 as seed ortholog is 100%.

Group of orthologs #1130. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:135

Q757V3              	100.00%		H3HAX9              	100.00%
Q74Z98              	8.07%		
Bootstrap support for Q757V3 as seed ortholog is 100%.
Bootstrap support for H3HAX9 as seed ortholog is 100%.

Group of orthologs #1131. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:135

Q751W7              	100.00%		H3G714              	100.00%
Bootstrap support for Q751W7 as seed ortholog is 100%.
Bootstrap support for H3G714 as seed ortholog is 100%.

Group of orthologs #1132. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:135

Q758N4              	100.00%		H3G548              	100.00%
Bootstrap support for Q758N4 as seed ortholog is 100%.
Bootstrap support for H3G548 as seed ortholog is 100%.

Group of orthologs #1133. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:26

Q754K8              	100.00%		H3G8A5              	100.00%
Bootstrap support for Q754K8 as seed ortholog is 100%.
Bootstrap support for H3G8A5 as seed ortholog is 94%.

Group of orthologs #1134. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:135

Q756N9              	100.00%		H3G8H6              	100.00%
Bootstrap support for Q756N9 as seed ortholog is 100%.
Bootstrap support for H3G8H6 as seed ortholog is 100%.

Group of orthologs #1135. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:92

Q74ZD2              	100.00%		H3GVF5              	100.00%
Bootstrap support for Q74ZD2 as seed ortholog is 100%.
Bootstrap support for H3GVF5 as seed ortholog is 99%.

Group of orthologs #1136. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:135

Q75B80              	100.00%		H3GNK7              	100.00%
Bootstrap support for Q75B80 as seed ortholog is 100%.
Bootstrap support for H3GNK7 as seed ortholog is 100%.

Group of orthologs #1137. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.ramorum:135

Q75D68              	100.00%		H3GNV8              	100.00%
Bootstrap support for Q75D68 as seed ortholog is 100%.
Bootstrap support for H3GNV8 as seed ortholog is 100%.

Group of orthologs #1138. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:16

Q752A0              	100.00%		H3G4Z8              	100.00%
                    	       		H3GAI8              	100.00%
                    	       		H3GAI7              	69.45%
Bootstrap support for Q752A0 as seed ortholog is 100%.
Bootstrap support for H3G4Z8 as seed ortholog is 68%.
Alternative seed ortholog is H3G902 (16 bits away from this cluster)
Bootstrap support for H3GAI8 as seed ortholog is 70%.
Alternative seed ortholog is H3G902 (16 bits away from this cluster)

Group of orthologs #1139. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:134

Q751L1              	100.00%		H3HD62              	100.00%
                    	       		H3G5A3              	91.94%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for H3HD62 as seed ortholog is 100%.

Group of orthologs #1140. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:22 P.ramorum:16

Q751G7              	100.00%		H3G5H0              	100.00%
Bootstrap support for Q751G7 as seed ortholog is 81%.
Bootstrap support for H3G5H0 as seed ortholog is 76%.

Group of orthologs #1141. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:134

Q75B71              	100.00%		H3GCG0              	100.00%
Bootstrap support for Q75B71 as seed ortholog is 100%.
Bootstrap support for H3GCG0 as seed ortholog is 100%.

Group of orthologs #1142. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:134

Q75DR6              	100.00%		H3GKI1              	100.00%
Bootstrap support for Q75DR6 as seed ortholog is 100%.
Bootstrap support for H3GKI1 as seed ortholog is 100%.

Group of orthologs #1143. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:134

Q75CA7              	100.00%		H3GML2              	100.00%
Bootstrap support for Q75CA7 as seed ortholog is 100%.
Bootstrap support for H3GML2 as seed ortholog is 100%.

Group of orthologs #1144. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.ramorum:33

Q75EP3              	100.00%		H3GXC9              	100.00%
Bootstrap support for Q75EP3 as seed ortholog is 87%.
Bootstrap support for H3GXC9 as seed ortholog is 80%.

Group of orthologs #1145. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.ramorum:134

Q75AB1              	100.00%		H3HBD3              	100.00%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for H3HBD3 as seed ortholog is 100%.

Group of orthologs #1146. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:133

Q752U5              	100.00%		H3G9U1              	100.00%
                    	       		H3GA71              	100.00%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for H3G9U1 as seed ortholog is 100%.
Bootstrap support for H3GA71 as seed ortholog is 100%.

Group of orthologs #1147. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:133

Q75EF9              	100.00%		H3GPT4              	100.00%
                    	       		H3H5Z3              	100.00%
Bootstrap support for Q75EF9 as seed ortholog is 100%.
Bootstrap support for H3GPT4 as seed ortholog is 100%.
Bootstrap support for H3H5Z3 as seed ortholog is 100%.

Group of orthologs #1148. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:57

Q753W2              	100.00%		H3G8V4              	100.00%
Bootstrap support for Q753W2 as seed ortholog is 100%.
Bootstrap support for H3G8V4 as seed ortholog is 95%.

Group of orthologs #1149. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:47

Q754P8              	100.00%		H3GA46              	100.00%
Bootstrap support for Q754P8 as seed ortholog is 100%.
Bootstrap support for H3GA46 as seed ortholog is 94%.

Group of orthologs #1150. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:133

Q75B93              	100.00%		H3GBC5              	100.00%
Bootstrap support for Q75B93 as seed ortholog is 100%.
Bootstrap support for H3GBC5 as seed ortholog is 100%.

Group of orthologs #1151. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.ramorum:18

Q75CN9              	100.00%		H3GQ99              	100.00%
Bootstrap support for Q75CN9 as seed ortholog is 100%.
Bootstrap support for H3GQ99 as seed ortholog is 72%.
Alternative seed ortholog is H3GJS2 (18 bits away from this cluster)

Group of orthologs #1152. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.ramorum:132

Q753X8              	100.00%		H3G5I3              	100.00%
Bootstrap support for Q753X8 as seed ortholog is 100%.
Bootstrap support for H3G5I3 as seed ortholog is 100%.

Group of orthologs #1153. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.ramorum:132

Q753Z5              	100.00%		H3H1L7              	100.00%
Bootstrap support for Q753Z5 as seed ortholog is 100%.
Bootstrap support for H3H1L7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.ramorum:131

Q757K9              	100.00%		H3GUB2              	100.00%
Q75DN9              	8.63%		H3HD49              	43.83%
Bootstrap support for Q757K9 as seed ortholog is 100%.
Bootstrap support for H3GUB2 as seed ortholog is 100%.

Group of orthologs #1155. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.ramorum:131

Q75C01              	100.00%		H3G9H6              	100.00%
Bootstrap support for Q75C01 as seed ortholog is 100%.
Bootstrap support for H3G9H6 as seed ortholog is 100%.

Group of orthologs #1156. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.ramorum:131

Q752R9              	100.00%		H3GME6              	100.00%
Bootstrap support for Q752R9 as seed ortholog is 100%.
Bootstrap support for H3GME6 as seed ortholog is 100%.

Group of orthologs #1157. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.ramorum:131

Q75BU2              	100.00%		H3H3F7              	100.00%
Bootstrap support for Q75BU2 as seed ortholog is 95%.
Bootstrap support for H3H3F7 as seed ortholog is 100%.

Group of orthologs #1158. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:61

Q75DW3              	100.00%		H3GZ94              	100.00%
                    	       		H3GAB3              	56.05%
                    	       		H3G8T2              	48.37%
                    	       		H3GZ74              	47.98%
                    	       		H3GZ96              	42.42%
                    	       		H3G876              	37.62%
Bootstrap support for Q75DW3 as seed ortholog is 99%.
Bootstrap support for H3GZ94 as seed ortholog is 96%.

Group of orthologs #1159. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.ramorum:130

Q74ZK1              	100.00%		H3GLF5              	100.00%
                    	       		H3GLF4              	69.84%
Bootstrap support for Q74ZK1 as seed ortholog is 100%.
Bootstrap support for H3GLF5 as seed ortholog is 100%.

Group of orthologs #1160. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.ramorum:130

Q75C33              	100.00%		H3GE88              	100.00%
                    	       		H3G9T4              	16.16%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for H3GE88 as seed ortholog is 100%.

Group of orthologs #1161. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.ramorum:130

Q753B1              	100.00%		H3GNV2              	100.00%
Bootstrap support for Q753B1 as seed ortholog is 100%.
Bootstrap support for H3GNV2 as seed ortholog is 100%.

Group of orthologs #1162. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.ramorum:130

Q758R3              	100.00%		H3GXU6              	100.00%
Bootstrap support for Q758R3 as seed ortholog is 100%.
Bootstrap support for H3GXU6 as seed ortholog is 100%.

Group of orthologs #1163. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.ramorum:130

Q756R3              	100.00%		H3HB20              	100.00%
Bootstrap support for Q756R3 as seed ortholog is 100%.
Bootstrap support for H3HB20 as seed ortholog is 100%.

Group of orthologs #1164. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:129

Q75EW3              	100.00%		H3GEK1              	100.00%
                    	       		H3GEK3              	96.61%
Bootstrap support for Q75EW3 as seed ortholog is 100%.
Bootstrap support for H3GEK1 as seed ortholog is 100%.

Group of orthologs #1165. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:129

Q757D7              	100.00%		H3GA04              	100.00%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for H3GA04 as seed ortholog is 100%.

Group of orthologs #1166. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:4 P.ramorum:20

Q754E6              	100.00%		H3GDE6              	100.00%
Bootstrap support for Q754E6 as seed ortholog is 52%.
Alternative seed ortholog is Q753E6 (4 bits away from this cluster)
Bootstrap support for H3GDE6 as seed ortholog is 77%.

Group of orthologs #1167. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:129

Q758Q3              	100.00%		H3GAE3              	100.00%
Bootstrap support for Q758Q3 as seed ortholog is 100%.
Bootstrap support for H3GAE3 as seed ortholog is 100%.

Group of orthologs #1168. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:129

Q75DI4              	100.00%		H3GAS8              	100.00%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for H3GAS8 as seed ortholog is 100%.

Group of orthologs #1169. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:129

Q75B46              	100.00%		H3GSW8              	100.00%
Bootstrap support for Q75B46 as seed ortholog is 100%.
Bootstrap support for H3GSW8 as seed ortholog is 100%.

Group of orthologs #1170. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:53

Q75AV8              	100.00%		H3GXG5              	100.00%
Bootstrap support for Q75AV8 as seed ortholog is 100%.
Bootstrap support for H3GXG5 as seed ortholog is 96%.

Group of orthologs #1171. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.ramorum:129

Q74Z88              	100.00%		H3HDX0              	100.00%
Bootstrap support for Q74Z88 as seed ortholog is 100%.
Bootstrap support for H3HDX0 as seed ortholog is 100%.

Group of orthologs #1172. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.ramorum:128

Q75BG8              	100.00%		H3GMB3              	100.00%
                    	       		H3GG84              	21.88%
                    	       		H3GYP7              	21.63%
                    	       		H3GWW5              	13.98%
                    	       		H3GE54              	13.64%
                    	       		H3G8Y7              	13.56%
                    	       		H3GWW6              	11.81%
                    	       		H3GE55              	11.40%
                    	       		H3GA50              	11.31%
                    	       		H3G9Y6              	9.40%
Bootstrap support for Q75BG8 as seed ortholog is 100%.
Bootstrap support for H3GMB3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.ramorum:128

Q751I5              	100.00%		H3GE78              	100.00%
Bootstrap support for Q751I5 as seed ortholog is 92%.
Bootstrap support for H3GE78 as seed ortholog is 100%.

Group of orthologs #1174. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:128

Q754T6              	100.00%		H3H7R5              	100.00%
Bootstrap support for Q754T6 as seed ortholog is 98%.
Bootstrap support for H3H7R5 as seed ortholog is 100%.

Group of orthologs #1175. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:127

Q75BL0              	100.00%		H3H3Y5              	100.00%
                    	       		H3GEH0              	6.73%
                    	       		H3GYJ3              	5.99%
Bootstrap support for Q75BL0 as seed ortholog is 100%.
Bootstrap support for H3H3Y5 as seed ortholog is 100%.

Group of orthologs #1176. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.ramorum:127

Q754Q8              	100.00%		H3G7X5              	100.00%
Bootstrap support for Q754Q8 as seed ortholog is 100%.
Bootstrap support for H3G7X5 as seed ortholog is 100%.

Group of orthologs #1177. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:127

Q753Q5              	100.00%		H3G8X3              	100.00%
Bootstrap support for Q753Q5 as seed ortholog is 100%.
Bootstrap support for H3G8X3 as seed ortholog is 100%.

Group of orthologs #1178. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:127

Q75E17              	100.00%		H3G9B7              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 100%.
Bootstrap support for H3G9B7 as seed ortholog is 100%.

Group of orthologs #1179. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:127

Q75DK9              	100.00%		H3GA64              	100.00%
Bootstrap support for Q75DK9 as seed ortholog is 100%.
Bootstrap support for H3GA64 as seed ortholog is 100%.

Group of orthologs #1180. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:127

Q751V0              	100.00%		H3GSJ5              	100.00%
Bootstrap support for Q751V0 as seed ortholog is 100%.
Bootstrap support for H3GSJ5 as seed ortholog is 100%.

Group of orthologs #1181. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:76

Q758Y6              	100.00%		H3GMK3              	100.00%
Bootstrap support for Q758Y6 as seed ortholog is 99%.
Bootstrap support for H3GMK3 as seed ortholog is 99%.

Group of orthologs #1182. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.ramorum:127

Q75AH9              	100.00%		H3GNF0              	100.00%
Bootstrap support for Q75AH9 as seed ortholog is 100%.
Bootstrap support for H3GNF0 as seed ortholog is 100%.

Group of orthologs #1183. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:126

Q75DF7              	100.00%		H3GGB6              	100.00%
                    	       		H3GGB7              	94.41%
                    	       		H3GGB2              	67.38%
                    	       		H3GGB5              	66.58%
                    	       		H3GGC7              	64.05%
Bootstrap support for Q75DF7 as seed ortholog is 100%.
Bootstrap support for H3GGB6 as seed ortholog is 100%.

Group of orthologs #1184. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:126

Q75DM6              	100.00%		H3H9T9              	100.00%
                    	       		H3GM07              	29.01%
Bootstrap support for Q75DM6 as seed ortholog is 100%.
Bootstrap support for H3H9T9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:7

Q750M6              	100.00%		H3GGH8              	100.00%
Bootstrap support for Q750M6 as seed ortholog is 100%.
Bootstrap support for H3GGH8 as seed ortholog is 55%.
Alternative seed ortholog is H3GQ39 (7 bits away from this cluster)

Group of orthologs #1186. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:60

Q754Z4              	100.00%		H3GE00              	100.00%
Bootstrap support for Q754Z4 as seed ortholog is 100%.
Bootstrap support for H3GE00 as seed ortholog is 96%.

Group of orthologs #1187. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:56

Q75F71              	100.00%		H3G8F4              	100.00%
Bootstrap support for Q75F71 as seed ortholog is 97%.
Bootstrap support for H3G8F4 as seed ortholog is 98%.

Group of orthologs #1188. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:126

Q758J6              	100.00%		H3GNM0              	100.00%
Bootstrap support for Q758J6 as seed ortholog is 100%.
Bootstrap support for H3GNM0 as seed ortholog is 100%.

Group of orthologs #1189. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:126

Q75A84              	100.00%		H3GPM7              	100.00%
Bootstrap support for Q75A84 as seed ortholog is 100%.
Bootstrap support for H3GPM7 as seed ortholog is 100%.

Group of orthologs #1190. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.ramorum:126

Q75F31              	100.00%		H3GMB5              	100.00%
Bootstrap support for Q75F31 as seed ortholog is 100%.
Bootstrap support for H3GMB5 as seed ortholog is 100%.

Group of orthologs #1191. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:27

Q74ZW2              	100.00%		H3GD85              	100.00%
Bootstrap support for Q74ZW2 as seed ortholog is 98%.
Bootstrap support for H3GD85 as seed ortholog is 75%.

Group of orthologs #1192. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q75E60              	100.00%		H3GDF7              	100.00%
                    	       		H3GZW6              	22.78%
Bootstrap support for Q75E60 as seed ortholog is 100%.
Bootstrap support for H3GDF7 as seed ortholog is 100%.

Group of orthologs #1193. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q756L5              	100.00%		H3GZA4              	100.00%
                    	       		H3H9R8              	100.00%
Bootstrap support for Q756L5 as seed ortholog is 100%.
Bootstrap support for H3GZA4 as seed ortholog is 100%.
Bootstrap support for H3H9R8 as seed ortholog is 100%.

Group of orthologs #1194. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q753B3              	100.00%		H3GA82              	100.00%
Bootstrap support for Q753B3 as seed ortholog is 100%.
Bootstrap support for H3GA82 as seed ortholog is 100%.

Group of orthologs #1195. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q75C52              	100.00%		H3G5Z9              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for H3G5Z9 as seed ortholog is 100%.

Group of orthologs #1196. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q75A75              	100.00%		H3G8M6              	100.00%
Bootstrap support for Q75A75 as seed ortholog is 100%.
Bootstrap support for H3G8M6 as seed ortholog is 100%.

Group of orthologs #1197. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:48

Q752C9              	100.00%		H3GI81              	100.00%
Bootstrap support for Q752C9 as seed ortholog is 100%.
Bootstrap support for H3GI81 as seed ortholog is 92%.

Group of orthologs #1198. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.ramorum:124

Q75EU7              	100.00%		H3GHR3              	100.00%
Bootstrap support for Q75EU7 as seed ortholog is 92%.
Bootstrap support for H3GHR3 as seed ortholog is 100%.

Group of orthologs #1199. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q751V5              	100.00%		H3GWY1              	100.00%
Bootstrap support for Q751V5 as seed ortholog is 100%.
Bootstrap support for H3GWY1 as seed ortholog is 100%.

Group of orthologs #1200. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q75BS7              	100.00%		H3GS08              	100.00%
Bootstrap support for Q75BS7 as seed ortholog is 100%.
Bootstrap support for H3GS08 as seed ortholog is 100%.

Group of orthologs #1201. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.ramorum:124

Q75E00              	100.00%		H3GXI3              	100.00%
Bootstrap support for Q75E00 as seed ortholog is 100%.
Bootstrap support for H3GXI3 as seed ortholog is 100%.

Group of orthologs #1202. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.ramorum:35

Q75CZ3              	100.00%		H3GAX3              	100.00%
                    	       		H3GAC5              	99.05%
                    	       		H3GZL7              	97.15%
Bootstrap support for Q75CZ3 as seed ortholog is 100%.
Bootstrap support for H3GAX3 as seed ortholog is 81%.

Group of orthologs #1203. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.ramorum:123

Q753F4              	100.00%		H3G581              	100.00%
Bootstrap support for Q753F4 as seed ortholog is 100%.
Bootstrap support for H3G581 as seed ortholog is 100%.

Group of orthologs #1204. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.ramorum:123

Q751L8              	100.00%		H3G9J7              	100.00%
Bootstrap support for Q751L8 as seed ortholog is 100%.
Bootstrap support for H3G9J7 as seed ortholog is 100%.

Group of orthologs #1205. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:2 P.ramorum:4

Q758M6              	100.00%		H3GA55              	100.00%
Bootstrap support for Q758M6 as seed ortholog is 49%.
Alternative seed ortholog is Q750F9 (2 bits away from this cluster)
Bootstrap support for H3GA55 as seed ortholog is 45%.
Alternative seed ortholog is H3GSN7 (4 bits away from this cluster)

Group of orthologs #1206. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.ramorum:123

Q75F67              	100.00%		H3GJU1              	100.00%
Bootstrap support for Q75F67 as seed ortholog is 100%.
Bootstrap support for H3GJU1 as seed ortholog is 100%.

Group of orthologs #1207. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.ramorum:20

Q75A17              	100.00%		H3GVK9              	100.00%
Bootstrap support for Q75A17 as seed ortholog is 100%.
Bootstrap support for H3GVK9 as seed ortholog is 73%.
Alternative seed ortholog is H3GLI3 (20 bits away from this cluster)

Group of orthologs #1208. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.ramorum:123

Q757Y3              	100.00%		H3GY54              	100.00%
Bootstrap support for Q757Y3 as seed ortholog is 100%.
Bootstrap support for H3GY54 as seed ortholog is 100%.

Group of orthologs #1209. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.ramorum:122

Q75DZ8              	100.00%		H3GC99              	100.00%
Q753B4              	18.25%		
Bootstrap support for Q75DZ8 as seed ortholog is 100%.
Bootstrap support for H3GC99 as seed ortholog is 100%.

Group of orthologs #1210. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.ramorum:43

Q74ZE3              	100.00%		H3H1P5              	100.00%
                    	       		H3H1N9              	21.28%
Bootstrap support for Q74ZE3 as seed ortholog is 100%.
Bootstrap support for H3H1P5 as seed ortholog is 85%.

Group of orthologs #1211. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.ramorum:122

Q75D55              	100.00%		H3G6N6              	100.00%
Bootstrap support for Q75D55 as seed ortholog is 100%.
Bootstrap support for H3G6N6 as seed ortholog is 100%.

Group of orthologs #1212. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.ramorum:122

Q75AT3              	100.00%		H3GHR1              	100.00%
Bootstrap support for Q75AT3 as seed ortholog is 100%.
Bootstrap support for H3GHR1 as seed ortholog is 100%.

Group of orthologs #1213. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:13

Q75BL1              	100.00%		H3GPZ2              	100.00%
Bootstrap support for Q75BL1 as seed ortholog is 91%.
Bootstrap support for H3GPZ2 as seed ortholog is 63%.
Alternative seed ortholog is H3GQM4 (13 bits away from this cluster)

Group of orthologs #1214. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.ramorum:122

Q75DP4              	100.00%		H3GYT5              	100.00%
Bootstrap support for Q75DP4 as seed ortholog is 100%.
Bootstrap support for H3GYT5 as seed ortholog is 100%.

Group of orthologs #1215. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.ramorum:122

Q750Q2              	100.00%		H3HEE6              	100.00%
Bootstrap support for Q750Q2 as seed ortholog is 100%.
Bootstrap support for H3HEE6 as seed ortholog is 100%.

Group of orthologs #1216. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.ramorum:121

Q75A51              	100.00%		H3GVN3              	100.00%
Q75EH9              	11.16%		
Bootstrap support for Q75A51 as seed ortholog is 100%.
Bootstrap support for H3GVN3 as seed ortholog is 100%.

Group of orthologs #1217. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.ramorum:121

Q75CV2              	100.00%		H3GT63              	100.00%
                    	       		H3GT62              	49.38%
Bootstrap support for Q75CV2 as seed ortholog is 100%.
Bootstrap support for H3GT63 as seed ortholog is 100%.

Group of orthologs #1218. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.ramorum:121

Q757G8              	100.00%		H3H5P8              	100.00%
                    	       		H3H0H4              	75.83%
Bootstrap support for Q757G8 as seed ortholog is 100%.
Bootstrap support for H3H5P8 as seed ortholog is 100%.

Group of orthologs #1219. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.ramorum:121

Q752K5              	100.00%		H3G850              	100.00%
Bootstrap support for Q752K5 as seed ortholog is 100%.
Bootstrap support for H3G850 as seed ortholog is 100%.

Group of orthologs #1220. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.ramorum:120

Q752Z2              	100.00%		H3G6F4              	100.00%
Bootstrap support for Q752Z2 as seed ortholog is 100%.
Bootstrap support for H3G6F4 as seed ortholog is 100%.

Group of orthologs #1221. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.ramorum:120

Q75A65              	100.00%		H3G770              	100.00%
Bootstrap support for Q75A65 as seed ortholog is 100%.
Bootstrap support for H3G770 as seed ortholog is 100%.

Group of orthologs #1222. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.ramorum:120

Q74ZX9              	100.00%		H3GL66              	100.00%
Bootstrap support for Q74ZX9 as seed ortholog is 100%.
Bootstrap support for H3GL66 as seed ortholog is 100%.

Group of orthologs #1223. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.ramorum:120

Q75AC0              	100.00%		H3GJT5              	100.00%
Bootstrap support for Q75AC0 as seed ortholog is 100%.
Bootstrap support for H3GJT5 as seed ortholog is 100%.

Group of orthologs #1224. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.ramorum:120

Q751U0              	100.00%		H3GTJ4              	100.00%
Bootstrap support for Q751U0 as seed ortholog is 100%.
Bootstrap support for H3GTJ4 as seed ortholog is 100%.

Group of orthologs #1225. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:75

Q75F17              	100.00%		H3GBA3              	100.00%
                    	       		H3GHJ3              	70.57%
                    	       		H3G8M0              	32.62%
                    	       		H3G9G3              	20.57%
                    	       		H3G8Z3              	20.21%
                    	       		H3G9M9              	20.21%
                    	       		H3GB66              	17.20%
                    	       		H3GJP2              	12.59%
Bootstrap support for Q75F17 as seed ortholog is 93%.
Bootstrap support for H3GBA3 as seed ortholog is 97%.

Group of orthologs #1226. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:119

Q756I7              	100.00%		H3GIF5              	100.00%
                    	       		H3GCD9              	10.84%
                    	       		H3GSM0              	7.18%
                    	       		H3GD78              	6.78%
Bootstrap support for Q756I7 as seed ortholog is 96%.
Bootstrap support for H3GIF5 as seed ortholog is 100%.

Group of orthologs #1227. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q755R1              	100.00%		H3G6D7              	100.00%
D8FGF0              	100.00%		
Bootstrap support for Q755R1 as seed ortholog is 100%.
Bootstrap support for D8FGF0 as seed ortholog is 100%.
Bootstrap support for H3G6D7 as seed ortholog is 100%.

Group of orthologs #1228. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:34 P.ramorum:50

Q75AF2              	100.00%		H3G6E1              	100.00%
Bootstrap support for Q75AF2 as seed ortholog is 93%.
Bootstrap support for H3G6E1 as seed ortholog is 97%.

Group of orthologs #1229. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q755I0              	100.00%		H3GCD0              	100.00%
Bootstrap support for Q755I0 as seed ortholog is 100%.
Bootstrap support for H3GCD0 as seed ortholog is 100%.

Group of orthologs #1230. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q758G3              	100.00%		H3GE06              	100.00%
Bootstrap support for Q758G3 as seed ortholog is 100%.
Bootstrap support for H3GE06 as seed ortholog is 100%.

Group of orthologs #1231. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q75E22              	100.00%		H3G8Z5              	100.00%
Bootstrap support for Q75E22 as seed ortholog is 100%.
Bootstrap support for H3G8Z5 as seed ortholog is 100%.

Group of orthologs #1232. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q75EZ3              	100.00%		H3GA96              	100.00%
Bootstrap support for Q75EZ3 as seed ortholog is 100%.
Bootstrap support for H3GA96 as seed ortholog is 100%.

Group of orthologs #1233. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q75AK7              	100.00%		H3GH25              	100.00%
Bootstrap support for Q75AK7 as seed ortholog is 100%.
Bootstrap support for H3GH25 as seed ortholog is 100%.

Group of orthologs #1234. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.ramorum:119

Q75EM4              	100.00%		H3GHR0              	100.00%
Bootstrap support for Q75EM4 as seed ortholog is 100%.
Bootstrap support for H3GHR0 as seed ortholog is 100%.

Group of orthologs #1235. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.ramorum:22

Q75BY0              	100.00%		H3GHZ1              	100.00%
                    	       		H3GCV3              	57.96%
                    	       		H3GMZ5              	5.89%
Bootstrap support for Q75BY0 as seed ortholog is 100%.
Bootstrap support for H3GHZ1 as seed ortholog is 75%.

Group of orthologs #1236. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.ramorum:118

Q750X5              	100.00%		H3G8C2              	100.00%
Bootstrap support for Q750X5 as seed ortholog is 100%.
Bootstrap support for H3G8C2 as seed ortholog is 100%.

Group of orthologs #1237. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:2 P.ramorum:118

Q759W8              	100.00%		H3GBQ0              	100.00%
Bootstrap support for Q759W8 as seed ortholog is 50%.
Alternative seed ortholog is Q758Z5 (2 bits away from this cluster)
Bootstrap support for H3GBQ0 as seed ortholog is 100%.

Group of orthologs #1238. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:118

Q74ZG5              	100.00%		H3GXG4              	100.00%
Bootstrap support for Q74ZG5 as seed ortholog is 86%.
Bootstrap support for H3GXG4 as seed ortholog is 100%.

Group of orthologs #1239. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.ramorum:33

Q75AF5              	100.00%		H3GQ63              	100.00%
Bootstrap support for Q75AF5 as seed ortholog is 100%.
Bootstrap support for H3GQ63 as seed ortholog is 20%.
Alternative seed ortholog is H3GD10 (33 bits away from this cluster)

Group of orthologs #1240. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:23 P.ramorum:43

Q759R2              	100.00%		H3GU33              	100.00%
Bootstrap support for Q759R2 as seed ortholog is 71%.
Alternative seed ortholog is Q75C43 (23 bits away from this cluster)
Bootstrap support for H3GU33 as seed ortholog is 93%.

Group of orthologs #1241. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:69

Q758B6              	100.00%		H3GMA7              	100.00%
                    	       		H3GGY9              	53.30%
                    	       		H3GM42              	17.22%
Bootstrap support for Q758B6 as seed ortholog is 100%.
Bootstrap support for H3GMA7 as seed ortholog is 97%.

Group of orthologs #1242. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:117

Q753T7              	100.00%		H3G8G5              	100.00%
                    	       		H3G8G4              	49.59%
Bootstrap support for Q753T7 as seed ortholog is 100%.
Bootstrap support for H3G8G5 as seed ortholog is 100%.

Group of orthologs #1243. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:54

E7FHS1              	100.00%		H3GE52              	100.00%
Bootstrap support for E7FHS1 as seed ortholog is 100%.
Bootstrap support for H3GE52 as seed ortholog is 97%.

Group of orthologs #1244. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:0 P.ramorum:48

Q74ZQ9              	100.00%		H3GLU7              	100.00%
Bootstrap support for Q74ZQ9 as seed ortholog is 53%.
Alternative seed ortholog is Q752M3 (0 bits away from this cluster)
Bootstrap support for H3GLU7 as seed ortholog is 84%.

Group of orthologs #1245. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.ramorum:117

Q75BJ7              	100.00%		H3GSA3              	100.00%
Bootstrap support for Q75BJ7 as seed ortholog is 83%.
Bootstrap support for H3GSA3 as seed ortholog is 100%.

Group of orthologs #1246. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.ramorum:55

Q75EG3              	100.00%		H3GU73              	100.00%
Bootstrap support for Q75EG3 as seed ortholog is 100%.
Bootstrap support for H3GU73 as seed ortholog is 83%.

Group of orthologs #1247. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:116

Q757L1              	100.00%		H3GYV5              	100.00%
                    	       		H3GYW6              	31.75%
Bootstrap support for Q757L1 as seed ortholog is 100%.
Bootstrap support for H3GYV5 as seed ortholog is 100%.

Group of orthologs #1248. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:116

Q750C6              	100.00%		H3G9I1              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 100%.
Bootstrap support for H3G9I1 as seed ortholog is 100%.

Group of orthologs #1249. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:116

Q75DY2              	100.00%		H3GAA3              	100.00%
Bootstrap support for Q75DY2 as seed ortholog is 100%.
Bootstrap support for H3GAA3 as seed ortholog is 100%.

Group of orthologs #1250. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:116

Q75AQ8              	100.00%		H3GMZ0              	100.00%
Bootstrap support for Q75AQ8 as seed ortholog is 100%.
Bootstrap support for H3GMZ0 as seed ortholog is 100%.

Group of orthologs #1251. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.ramorum:116

Q75C47              	100.00%		H3GTF9              	100.00%
Bootstrap support for Q75C47 as seed ortholog is 100%.
Bootstrap support for H3GTF9 as seed ortholog is 100%.

Group of orthologs #1252. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:115

Q75BF3              	100.00%		H3GVC7              	100.00%
Q75DP5              	16.56%		H3GVC6              	38.97%
                    	       		H3H2F4              	18.84%
                    	       		H3GGD5              	16.04%
                    	       		H3GMF0              	15.93%
                    	       		H3GC06              	15.82%
                    	       		H3GI50              	15.72%
                    	       		H3GCN5              	15.61%
                    	       		H3GYV8              	15.61%
                    	       		H3HD36              	15.39%
                    	       		H3H2G0              	15.39%
                    	       		H3GLZ9              	15.07%
                    	       		H3HD37              	13.46%
                    	       		H3GIC4              	13.24%
                    	       		H3GU05              	13.02%
                    	       		H3HAZ5              	12.70%
                    	       		H3GZ86              	12.70%
                    	       		H3GD16              	12.49%
                    	       		H3GTX9              	12.27%
                    	       		H3GMR4              	12.16%
                    	       		H3GRZ4              	12.16%
                    	       		H3GXX7              	11.63%
                    	       		H3GMQ9              	11.52%
                    	       		H3HAH9              	11.41%
                    	       		H3GFJ0              	11.41%
                    	       		H3GMR2              	10.55%
                    	       		H3GJF2              	10.12%
                    	       		H3GXX9              	9.36%
                    	       		H3H2F0              	9.15%
                    	       		H3GXX4              	8.72%
                    	       		H3GJL4              	7.00%
Bootstrap support for Q75BF3 as seed ortholog is 73%.
Alternative seed ortholog is Q75EV7 (51 bits away from this cluster)
Bootstrap support for H3GVC7 as seed ortholog is 100%.

Group of orthologs #1253. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:115

Q756W3              	100.00%		H3GC05              	100.00%
                    	       		H3GIU1              	21.02%
                    	       		H3GC07              	19.34%
                    	       		H3GIU6              	18.03%
                    	       		H3GC01              	14.03%
                    	       		H3GM04              	8.34%
                    	       		H3H2F1              	8.11%
                    	       		H3GTZ9              	7.78%
                    	       		H3GV91              	7.64%
                    	       		H3GID8              	6.76%
                    	       		H3GM05              	5.78%
                    	       		H3GVQ7              	5.45%
Bootstrap support for Q756W3 as seed ortholog is 100%.
Bootstrap support for H3GC05 as seed ortholog is 100%.

Group of orthologs #1254. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:24

Q752F2              	100.00%		H3GJY2              	100.00%
Q752I9              	38.18%		
Bootstrap support for Q752F2 as seed ortholog is 100%.
Bootstrap support for H3GJY2 as seed ortholog is 74%.
Alternative seed ortholog is H3GWR4 (24 bits away from this cluster)

Group of orthologs #1255. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:23

Q75BX7              	100.00%		H3GYP8              	100.00%
Q75BX8              	20.90%		
Bootstrap support for Q75BX7 as seed ortholog is 86%.
Bootstrap support for H3GYP8 as seed ortholog is 75%.

Group of orthologs #1256. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:115

Q75A86              	100.00%		H3G8Y1              	100.00%
Bootstrap support for Q75A86 as seed ortholog is 100%.
Bootstrap support for H3G8Y1 as seed ortholog is 100%.

Group of orthologs #1257. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:115

Q75BZ9              	100.00%		H3G9D5              	100.00%
Bootstrap support for Q75BZ9 as seed ortholog is 100%.
Bootstrap support for H3G9D5 as seed ortholog is 100%.

Group of orthologs #1258. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:115

Q75DK4              	100.00%		H3GLV7              	100.00%
Bootstrap support for Q75DK4 as seed ortholog is 100%.
Bootstrap support for H3GLV7 as seed ortholog is 100%.

Group of orthologs #1259. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.ramorum:115

Q752U6              	100.00%		H3HCV1              	100.00%
Bootstrap support for Q752U6 as seed ortholog is 100%.
Bootstrap support for H3HCV1 as seed ortholog is 100%.

Group of orthologs #1260. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:57

Q751R4              	100.00%		H3GAU8              	100.00%
                    	       		H3GWQ8              	100.00%
                    	       		H3H400              	100.00%
                    	       		H3GC44              	92.45%
                    	       		H3GC45              	91.45%
                    	       		H3GC43              	56.73%
                    	       		H3GBC4              	20.76%
Bootstrap support for Q751R4 as seed ortholog is 91%.
Bootstrap support for H3GAU8 as seed ortholog is 96%.
Bootstrap support for H3GWQ8 as seed ortholog is 96%.
Bootstrap support for H3H400 as seed ortholog is 96%.

Group of orthologs #1261. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 P.ramorum:114

Q753Z0              	100.00%		H3G5B7              	100.00%
Bootstrap support for Q753Z0 as seed ortholog is 100%.
Bootstrap support for H3G5B7 as seed ortholog is 100%.

Group of orthologs #1262. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 P.ramorum:114

Q750E4              	100.00%		H3GYW5              	100.00%
Bootstrap support for Q750E4 as seed ortholog is 100%.
Bootstrap support for H3GYW5 as seed ortholog is 100%.

Group of orthologs #1263. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 P.ramorum:4

Q75CU2              	100.00%		H3GRN8              	100.00%
Bootstrap support for Q75CU2 as seed ortholog is 100%.
Bootstrap support for H3GRN8 as seed ortholog is 53%.
Alternative seed ortholog is H3GD51 (4 bits away from this cluster)

Group of orthologs #1264. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:114

Q751A6              	100.00%		H3HDS1              	100.00%
Bootstrap support for Q751A6 as seed ortholog is 96%.
Bootstrap support for H3HDS1 as seed ortholog is 100%.

Group of orthologs #1265. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q74ZP8              	100.00%		H3GUP1              	100.00%
                    	       		H3GYN9              	34.32%
                    	       		H3GY32              	12.72%
                    	       		H3GHV5              	10.09%
                    	       		H3GNP5              	8.44%
                    	       		H3GYY8              	7.13%
Bootstrap support for Q74ZP8 as seed ortholog is 100%.
Bootstrap support for H3GUP1 as seed ortholog is 100%.

Group of orthologs #1266. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q74ZN6              	100.00%		H3H571              	100.00%
                    	       		H3H8R3              	99.76%
Bootstrap support for Q74ZN6 as seed ortholog is 100%.
Bootstrap support for H3H571 as seed ortholog is 100%.

Group of orthologs #1267. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q74Z69              	100.00%		H3G8V1              	100.00%
Bootstrap support for Q74Z69 as seed ortholog is 100%.
Bootstrap support for H3G8V1 as seed ortholog is 100%.

Group of orthologs #1268. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q75A25              	100.00%		H3G946              	100.00%
Bootstrap support for Q75A25 as seed ortholog is 100%.
Bootstrap support for H3G946 as seed ortholog is 100%.

Group of orthologs #1269. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q75DL3              	100.00%		H3GDP2              	100.00%
Bootstrap support for Q75DL3 as seed ortholog is 100%.
Bootstrap support for H3GDP2 as seed ortholog is 100%.

Group of orthologs #1270. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q75EM8              	100.00%		H3GH72              	100.00%
Bootstrap support for Q75EM8 as seed ortholog is 100%.
Bootstrap support for H3GH72 as seed ortholog is 100%.

Group of orthologs #1271. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.ramorum:113

Q752W1              	100.00%		H3GXB8              	100.00%
Bootstrap support for Q752W1 as seed ortholog is 100%.
Bootstrap support for H3GXB8 as seed ortholog is 100%.

Group of orthologs #1272. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:112

Q755F3              	100.00%		H3GLK4              	100.00%
                    	       		H3GLK2              	47.23%
Bootstrap support for Q755F3 as seed ortholog is 100%.
Bootstrap support for H3GLK4 as seed ortholog is 100%.

Group of orthologs #1273. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:112

Q74ZC2              	100.00%		H3G7Q5              	100.00%
Bootstrap support for Q74ZC2 as seed ortholog is 100%.
Bootstrap support for H3G7Q5 as seed ortholog is 100%.

Group of orthologs #1274. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:112

Q75DS6              	100.00%		H3GFQ4              	100.00%
Bootstrap support for Q75DS6 as seed ortholog is 100%.
Bootstrap support for H3GFQ4 as seed ortholog is 100%.

Group of orthologs #1275. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:112

Q75F78              	100.00%		H3GFD9              	100.00%
Bootstrap support for Q75F78 as seed ortholog is 100%.
Bootstrap support for H3GFD9 as seed ortholog is 100%.

Group of orthologs #1276. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.ramorum:112

Q74ZP5              	100.00%		H3GZ44              	100.00%
Bootstrap support for Q74ZP5 as seed ortholog is 100%.
Bootstrap support for H3GZ44 as seed ortholog is 100%.

Group of orthologs #1277. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q74Z09              	100.00%		H3GJ62              	100.00%
                    	       		H3GJ63              	86.51%
Bootstrap support for Q74Z09 as seed ortholog is 100%.
Bootstrap support for H3GJ62 as seed ortholog is 100%.

Group of orthologs #1278. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q751A9              	100.00%		H3GZC5              	100.00%
                    	       		H3H2R3              	8.36%
Bootstrap support for Q751A9 as seed ortholog is 100%.
Bootstrap support for H3GZC5 as seed ortholog is 100%.

Group of orthologs #1279. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q74ZD1              	100.00%		H3GBG6              	100.00%
Bootstrap support for Q74ZD1 as seed ortholog is 100%.
Bootstrap support for H3GBG6 as seed ortholog is 100%.

Group of orthologs #1280. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q752M2              	100.00%		H3GGW6              	100.00%
Bootstrap support for Q752M2 as seed ortholog is 100%.
Bootstrap support for H3GGW6 as seed ortholog is 100%.

Group of orthologs #1281. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q75B68              	100.00%		H3GIE5              	100.00%
Bootstrap support for Q75B68 as seed ortholog is 100%.
Bootstrap support for H3GIE5 as seed ortholog is 100%.

Group of orthologs #1282. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q754C9              	100.00%		H3GZE2              	100.00%
Bootstrap support for Q754C9 as seed ortholog is 100%.
Bootstrap support for H3GZE2 as seed ortholog is 100%.

Group of orthologs #1283. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.ramorum:111

Q75D63              	100.00%		H3H461              	100.00%
Bootstrap support for Q75D63 as seed ortholog is 100%.
Bootstrap support for H3H461 as seed ortholog is 100%.

Group of orthologs #1284. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 P.ramorum:110

Q75C22              	100.00%		H3G9S0              	100.00%
                    	       		H3GZI5              	11.11%
                    	       		H3H5I1              	11.11%
Bootstrap support for Q75C22 as seed ortholog is 100%.
Bootstrap support for H3G9S0 as seed ortholog is 100%.

Group of orthologs #1285. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:109

Q758Q7              	100.00%		H3GMT1              	100.00%
                    	       		H3GMS8              	29.98%
                    	       		H3GMT0              	23.27%
                    	       		H3GTM6              	6.92%
Bootstrap support for Q758Q7 as seed ortholog is 100%.
Bootstrap support for H3GMT1 as seed ortholog is 100%.

Group of orthologs #1286. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:109

Q75CA0              	100.00%		H3GQG2              	100.00%
                    	       		H3G4Y6              	34.59%
                    	       		H3H1Q8              	14.32%
Bootstrap support for Q75CA0 as seed ortholog is 100%.
Bootstrap support for H3GQG2 as seed ortholog is 100%.

Group of orthologs #1287. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:48

Q75DJ8              	100.00%		H3G5K1              	100.00%
Bootstrap support for Q75DJ8 as seed ortholog is 100%.
Bootstrap support for H3G5K1 as seed ortholog is 98%.

Group of orthologs #1288. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:109

Q75BT1              	100.00%		H3GHX9              	100.00%
Bootstrap support for Q75BT1 as seed ortholog is 100%.
Bootstrap support for H3GHX9 as seed ortholog is 100%.

Group of orthologs #1289. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:109

Q75CS6              	100.00%		H3GLL0              	100.00%
Bootstrap support for Q75CS6 as seed ortholog is 100%.
Bootstrap support for H3GLL0 as seed ortholog is 100%.

Group of orthologs #1290. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.ramorum:26

Q74Z00              	100.00%		H3H240              	100.00%
Bootstrap support for Q74Z00 as seed ortholog is 100%.
Bootstrap support for H3H240 as seed ortholog is 72%.
Alternative seed ortholog is H3GDB9 (26 bits away from this cluster)

Group of orthologs #1291. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:54

Q74Z43              	100.00%		H3GFM4              	100.00%
Bootstrap support for Q74Z43 as seed ortholog is 100%.
Bootstrap support for H3GFM4 as seed ortholog is 94%.

Group of orthologs #1292. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:108

Q752B7              	100.00%		H3GNM2              	100.00%
Bootstrap support for Q752B7 as seed ortholog is 100%.
Bootstrap support for H3GNM2 as seed ortholog is 100%.

Group of orthologs #1293. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:108

Q75CY9              	100.00%		H3GQS8              	100.00%
Bootstrap support for Q75CY9 as seed ortholog is 100%.
Bootstrap support for H3GQS8 as seed ortholog is 100%.

Group of orthologs #1294. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:46

Q751W0              	100.00%		H3GZV7              	100.00%
Bootstrap support for Q751W0 as seed ortholog is 100%.
Bootstrap support for H3GZV7 as seed ortholog is 52%.
Alternative seed ortholog is H3G945 (46 bits away from this cluster)

Group of orthologs #1295. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:108

Q759I0              	100.00%		H3H367              	100.00%
Bootstrap support for Q759I0 as seed ortholog is 100%.
Bootstrap support for H3H367 as seed ortholog is 100%.

Group of orthologs #1296. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.ramorum:108

Q75EP2              	100.00%		H3H1C0              	100.00%
Bootstrap support for Q75EP2 as seed ortholog is 100%.
Bootstrap support for H3H1C0 as seed ortholog is 100%.

Group of orthologs #1297. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.ramorum:107

Q74Z75              	100.00%		H3GJN2              	100.00%
                    	       		H3HA61              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for H3GJN2 as seed ortholog is 100%.
Bootstrap support for H3HA61 as seed ortholog is 100%.

Group of orthologs #1298. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.ramorum:107

Q75DN4              	100.00%		H3GUN7              	100.00%
                    	       		H3GUN4              	16.29%
Bootstrap support for Q75DN4 as seed ortholog is 100%.
Bootstrap support for H3GUN7 as seed ortholog is 100%.

Group of orthologs #1299. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:36 P.ramorum:64

Q755G6              	100.00%		H3H4A2              	100.00%
                    	       		H3H3P5              	44.25%
Bootstrap support for Q755G6 as seed ortholog is 80%.
Bootstrap support for H3H4A2 as seed ortholog is 96%.

Group of orthologs #1300. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.ramorum:107

Q753B6              	100.00%		H3G9X2              	100.00%
Bootstrap support for Q753B6 as seed ortholog is 100%.
Bootstrap support for H3G9X2 as seed ortholog is 100%.

Group of orthologs #1301. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.ramorum:107

Q750K4              	100.00%		H3H4Q6              	100.00%
Bootstrap support for Q750K4 as seed ortholog is 100%.
Bootstrap support for H3H4Q6 as seed ortholog is 100%.

Group of orthologs #1302. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.ramorum:106

Q757M2              	100.00%		H3G7S5              	100.00%
                    	       		H3G6L1              	97.31%
Bootstrap support for Q757M2 as seed ortholog is 100%.
Bootstrap support for H3G7S5 as seed ortholog is 100%.

Group of orthologs #1303. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.ramorum:106

Q755J2              	100.00%		H3G7P4              	100.00%
Bootstrap support for Q755J2 as seed ortholog is 100%.
Bootstrap support for H3G7P4 as seed ortholog is 100%.

Group of orthologs #1304. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.ramorum:106

Q758N0              	100.00%		H3G934              	100.00%
Bootstrap support for Q758N0 as seed ortholog is 93%.
Bootstrap support for H3G934 as seed ortholog is 100%.

Group of orthologs #1305. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.ramorum:106

Q755L1              	100.00%		H3GSB4              	100.00%
Bootstrap support for Q755L1 as seed ortholog is 100%.
Bootstrap support for H3GSB4 as seed ortholog is 100%.

Group of orthologs #1306. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.ramorum:105

Q75A56              	100.00%		H3GKJ3              	100.00%
                    	       		H3GEL0              	18.85%
Bootstrap support for Q75A56 as seed ortholog is 100%.
Bootstrap support for H3GKJ3 as seed ortholog is 100%.

Group of orthologs #1307. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.ramorum:105

Q75E02              	100.00%		H3GJV7              	100.00%
                    	       		H3GJV8              	98.80%
Bootstrap support for Q75E02 as seed ortholog is 100%.
Bootstrap support for H3GJV7 as seed ortholog is 100%.

Group of orthologs #1308. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.ramorum:105

Q754L9              	100.00%		H3G8P4              	100.00%
Bootstrap support for Q754L9 as seed ortholog is 100%.
Bootstrap support for H3G8P4 as seed ortholog is 100%.

Group of orthologs #1309. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.ramorum:105

Q756E2              	100.00%		H3GBB8              	100.00%
Bootstrap support for Q756E2 as seed ortholog is 100%.
Bootstrap support for H3GBB8 as seed ortholog is 100%.

Group of orthologs #1310. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.ramorum:30

Q754G3              	100.00%		H3GKN1              	100.00%
Bootstrap support for Q754G3 as seed ortholog is 80%.
Bootstrap support for H3GKN1 as seed ortholog is 64%.
Alternative seed ortholog is H3H2M2 (30 bits away from this cluster)

Group of orthologs #1311. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.ramorum:105

Q756Q6              	100.00%		H3GM91              	100.00%
Bootstrap support for Q756Q6 as seed ortholog is 100%.
Bootstrap support for H3GM91 as seed ortholog is 100%.

Group of orthologs #1312. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.ramorum:105

Q75A02              	100.00%		H3GS73              	100.00%
Bootstrap support for Q75A02 as seed ortholog is 100%.
Bootstrap support for H3GS73 as seed ortholog is 100%.

Group of orthologs #1313. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.ramorum:104

Q74ZJ6              	100.00%		H3GZZ0              	100.00%
Q756C5              	100.00%		
Bootstrap support for Q74ZJ6 as seed ortholog is 100%.
Bootstrap support for Q756C5 as seed ortholog is 100%.
Bootstrap support for H3GZZ0 as seed ortholog is 100%.

Group of orthologs #1314. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.ramorum:104

Q75F86              	100.00%		H3H721              	100.00%
                    	       		H3HC98              	100.00%
Bootstrap support for Q75F86 as seed ortholog is 100%.
Bootstrap support for H3H721 as seed ortholog is 100%.
Bootstrap support for H3HC98 as seed ortholog is 100%.

Group of orthologs #1315. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.ramorum:104

Q750K3              	100.00%		H3G8L4              	100.00%
Bootstrap support for Q750K3 as seed ortholog is 100%.
Bootstrap support for H3G8L4 as seed ortholog is 100%.

Group of orthologs #1316. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.ramorum:104

Q750F5              	100.00%		H3H008              	100.00%
Bootstrap support for Q750F5 as seed ortholog is 100%.
Bootstrap support for H3H008 as seed ortholog is 100%.

Group of orthologs #1317. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.ramorum:104

Q75DV6              	100.00%		H3GU61              	100.00%
Bootstrap support for Q75DV6 as seed ortholog is 100%.
Bootstrap support for H3GU61 as seed ortholog is 100%.

Group of orthologs #1318. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:103

Q75BA9              	100.00%		H3GRW0              	100.00%
                    	       		H3H6B9              	100.00%
Bootstrap support for Q75BA9 as seed ortholog is 100%.
Bootstrap support for H3GRW0 as seed ortholog is 100%.
Bootstrap support for H3H6B9 as seed ortholog is 100%.

Group of orthologs #1319. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:103

Q758W6              	100.00%		H3GAE0              	100.00%
Bootstrap support for Q758W6 as seed ortholog is 100%.
Bootstrap support for H3GAE0 as seed ortholog is 100%.

Group of orthologs #1320. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:103

Q753P0              	100.00%		H3GWS0              	100.00%
Bootstrap support for Q753P0 as seed ortholog is 100%.
Bootstrap support for H3GWS0 as seed ortholog is 100%.

Group of orthologs #1321. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:103

Q75BW7              	100.00%		H3GTH1              	100.00%
Bootstrap support for Q75BW7 as seed ortholog is 100%.
Bootstrap support for H3GTH1 as seed ortholog is 100%.

Group of orthologs #1322. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.ramorum:103

Q75CP2              	100.00%		H3HBG6              	100.00%
Bootstrap support for Q75CP2 as seed ortholog is 100%.
Bootstrap support for H3HBG6 as seed ortholog is 100%.

Group of orthologs #1323. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.ramorum:102

Q753Q3              	100.00%		H3H0N1              	100.00%
                    	       		H3GYC2              	71.80%
                    	       		H3H0N2              	71.46%
                    	       		H3H8Q8              	47.92%
                    	       		H3GYC3              	44.43%
Bootstrap support for Q753Q3 as seed ortholog is 100%.
Bootstrap support for H3H0N1 as seed ortholog is 100%.

Group of orthologs #1324. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.ramorum:28

Q759T0              	100.00%		H3GAG4              	100.00%
Bootstrap support for Q759T0 as seed ortholog is 100%.
Bootstrap support for H3GAG4 as seed ortholog is 96%.

Group of orthologs #1325. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.ramorum:102

Q75EY1              	100.00%		H3G7M5              	100.00%
Bootstrap support for Q75EY1 as seed ortholog is 100%.
Bootstrap support for H3G7M5 as seed ortholog is 100%.

Group of orthologs #1326. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.ramorum:102

Q75C96              	100.00%		H3GH50              	100.00%
Bootstrap support for Q75C96 as seed ortholog is 100%.
Bootstrap support for H3GH50 as seed ortholog is 100%.

Group of orthologs #1327. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.ramorum:102

Q75B32              	100.00%		H3GKX8              	100.00%
Bootstrap support for Q75B32 as seed ortholog is 100%.
Bootstrap support for H3GKX8 as seed ortholog is 100%.

Group of orthologs #1328. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.ramorum:102

Q74Z68              	100.00%		H3HB77              	100.00%
Bootstrap support for Q74Z68 as seed ortholog is 100%.
Bootstrap support for H3HB77 as seed ortholog is 100%.

Group of orthologs #1329. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q75AA9              	100.00%		H3GRA5              	100.00%
                    	       		H3H6C7              	100.00%
Bootstrap support for Q75AA9 as seed ortholog is 100%.
Bootstrap support for H3GRA5 as seed ortholog is 100%.
Bootstrap support for H3H6C7 as seed ortholog is 100%.

Group of orthologs #1330. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q755Y0              	100.00%		H3H0U7              	100.00%
                    	       		H3HAE0              	84.71%
Bootstrap support for Q755Y0 as seed ortholog is 100%.
Bootstrap support for H3H0U7 as seed ortholog is 100%.

Group of orthologs #1331. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q752Y3              	100.00%		H3GCL3              	100.00%
Bootstrap support for Q752Y3 as seed ortholog is 100%.
Bootstrap support for H3GCL3 as seed ortholog is 100%.

Group of orthologs #1332. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:31 P.ramorum:22

Q74Z23              	100.00%		H3GG07              	100.00%
Bootstrap support for Q74Z23 as seed ortholog is 81%.
Bootstrap support for H3GG07 as seed ortholog is 71%.
Alternative seed ortholog is H3H8Z2 (22 bits away from this cluster)

Group of orthologs #1333. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q759K6              	100.00%		H3GMV3              	100.00%
Bootstrap support for Q759K6 as seed ortholog is 100%.
Bootstrap support for H3GMV3 as seed ortholog is 100%.

Group of orthologs #1334. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q753C9              	100.00%		H3GXC2              	100.00%
Bootstrap support for Q753C9 as seed ortholog is 100%.
Bootstrap support for H3GXC2 as seed ortholog is 100%.

Group of orthologs #1335. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q756M9              	100.00%		H3GWY0              	100.00%
Bootstrap support for Q756M9 as seed ortholog is 100%.
Bootstrap support for H3GWY0 as seed ortholog is 100%.

Group of orthologs #1336. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.ramorum:101

Q756J2              	100.00%		H3H6N8              	100.00%
Bootstrap support for Q756J2 as seed ortholog is 100%.
Bootstrap support for H3H6N8 as seed ortholog is 100%.

Group of orthologs #1337. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.ramorum:22

Q75CK2              	100.00%		H3HDD1              	100.00%
Bootstrap support for Q75CK2 as seed ortholog is 86%.
Bootstrap support for H3HDD1 as seed ortholog is 70%.
Alternative seed ortholog is H3GRW8 (22 bits away from this cluster)

Group of orthologs #1338. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.ramorum:100

Q758J7              	100.00%		H3G7A3              	100.00%
Bootstrap support for Q758J7 as seed ortholog is 100%.
Bootstrap support for H3G7A3 as seed ortholog is 100%.

Group of orthologs #1339. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.ramorum:100

Q759U5              	100.00%		H3GMF6              	100.00%
Bootstrap support for Q759U5 as seed ortholog is 100%.
Bootstrap support for H3GMF6 as seed ortholog is 100%.

Group of orthologs #1340. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.ramorum:100

Q755X1              	100.00%		H3H0T8              	100.00%
Bootstrap support for Q755X1 as seed ortholog is 100%.
Bootstrap support for H3H0T8 as seed ortholog is 100%.

Group of orthologs #1341. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.ramorum:55

Q755N7              	100.00%		H3HCW5              	100.00%
Bootstrap support for Q755N7 as seed ortholog is 100%.
Bootstrap support for H3HCW5 as seed ortholog is 99%.

Group of orthologs #1342. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q754F0              	100.00%		H3GE97              	100.00%
                    	       		H3GE96              	24.84%
                    	       		H3HB55              	23.60%
                    	       		H3GE95              	21.74%
Bootstrap support for Q754F0 as seed ortholog is 100%.
Bootstrap support for H3GE97 as seed ortholog is 100%.

Group of orthologs #1343. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q75A35              	100.00%		H3G5W2              	100.00%
Bootstrap support for Q75A35 as seed ortholog is 100%.
Bootstrap support for H3G5W2 as seed ortholog is 100%.

Group of orthologs #1344. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.ramorum:26

Q74Z17              	100.00%		H3GQ86              	100.00%
Bootstrap support for Q74Z17 as seed ortholog is 70%.
Alternative seed ortholog is Q75E18 (53 bits away from this cluster)
Bootstrap support for H3GQ86 as seed ortholog is 69%.
Alternative seed ortholog is H3GNJ9 (26 bits away from this cluster)

Group of orthologs #1345. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q75DF1              	100.00%		H3GH26              	100.00%
Bootstrap support for Q75DF1 as seed ortholog is 100%.
Bootstrap support for H3GH26 as seed ortholog is 100%.

Group of orthologs #1346. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q758K8              	100.00%		H3GS67              	100.00%
Bootstrap support for Q758K8 as seed ortholog is 100%.
Bootstrap support for H3GS67 as seed ortholog is 100%.

Group of orthologs #1347. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:12

Q750R8              	100.00%		H3H3S9              	100.00%
Bootstrap support for Q750R8 as seed ortholog is 100%.
Bootstrap support for H3H3S9 as seed ortholog is 63%.
Alternative seed ortholog is H3G8U6 (12 bits away from this cluster)

Group of orthologs #1348. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q758Y2              	100.00%		H3GZT3              	100.00%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for H3GZT3 as seed ortholog is 100%.

Group of orthologs #1349. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q75BQ0              	100.00%		H3GXW9              	100.00%
Bootstrap support for Q75BQ0 as seed ortholog is 100%.
Bootstrap support for H3GXW9 as seed ortholog is 100%.

Group of orthologs #1350. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q759B9              	100.00%		H3HBK6              	100.00%
Bootstrap support for Q759B9 as seed ortholog is 100%.
Bootstrap support for H3HBK6 as seed ortholog is 100%.

Group of orthologs #1351. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q75C53              	100.00%		H3HBH6              	100.00%
Bootstrap support for Q75C53 as seed ortholog is 100%.
Bootstrap support for H3HBH6 as seed ortholog is 100%.

Group of orthologs #1352. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.ramorum:99

Q75BX4              	100.00%		H3HCW0              	100.00%
Bootstrap support for Q75BX4 as seed ortholog is 100%.
Bootstrap support for H3HCW0 as seed ortholog is 100%.

Group of orthologs #1353. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q753Y8              	100.00%		H3G8X9              	100.00%
Bootstrap support for Q753Y8 as seed ortholog is 100%.
Bootstrap support for H3G8X9 as seed ortholog is 100%.

Group of orthologs #1354. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q75DY3              	100.00%		H3GC55              	100.00%
Bootstrap support for Q75DY3 as seed ortholog is 100%.
Bootstrap support for H3GC55 as seed ortholog is 100%.

Group of orthologs #1355. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q753F1              	100.00%		H3GPB1              	100.00%
Bootstrap support for Q753F1 as seed ortholog is 100%.
Bootstrap support for H3GPB1 as seed ortholog is 100%.

Group of orthologs #1356. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q75CC8              	100.00%		H3GIV4              	100.00%
Bootstrap support for Q75CC8 as seed ortholog is 100%.
Bootstrap support for H3GIV4 as seed ortholog is 100%.

Group of orthologs #1357. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q74ZQ1              	100.00%		H3GZE6              	100.00%
Bootstrap support for Q74ZQ1 as seed ortholog is 100%.
Bootstrap support for H3GZE6 as seed ortholog is 100%.

Group of orthologs #1358. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q757V6              	100.00%		H3GVA1              	100.00%
Bootstrap support for Q757V6 as seed ortholog is 100%.
Bootstrap support for H3GVA1 as seed ortholog is 100%.

Group of orthologs #1359. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q75EQ8              	100.00%		H3GWV5              	100.00%
Bootstrap support for Q75EQ8 as seed ortholog is 100%.
Bootstrap support for H3GWV5 as seed ortholog is 100%.

Group of orthologs #1360. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.ramorum:98

Q752L4              	100.00%		H3HDZ9              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for H3HDZ9 as seed ortholog is 100%.

Group of orthologs #1361. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:13 P.ramorum:26

Q75E16              	100.00%		H3GYB0              	100.00%
Q759U8              	15.80%		H3H6X3              	39.60%
Q759G3              	14.28%		
Bootstrap support for Q75E16 as seed ortholog is 55%.
Alternative seed ortholog is Q756Q9 (13 bits away from this cluster)
Bootstrap support for H3GYB0 as seed ortholog is 51%.
Alternative seed ortholog is H3HAM5 (26 bits away from this cluster)

Group of orthologs #1362. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.ramorum:57

Q750X7              	100.00%		H3G6L7              	100.00%
                    	       		H3G6H5              	50.47%
Bootstrap support for Q750X7 as seed ortholog is 100%.
Bootstrap support for H3G6L7 as seed ortholog is 95%.

Group of orthologs #1363. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.ramorum:97

Q753P3              	100.00%		H3GC35              	100.00%
                    	       		H3H1M2              	51.37%
Bootstrap support for Q753P3 as seed ortholog is 100%.
Bootstrap support for H3GC35 as seed ortholog is 100%.

Group of orthologs #1364. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.ramorum:97

Q754M7              	100.00%		H3GYH6              	100.00%
                    	       		H3H9Z6              	48.58%
Bootstrap support for Q754M7 as seed ortholog is 100%.
Bootstrap support for H3GYH6 as seed ortholog is 100%.

Group of orthologs #1365. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.ramorum:15

Q750U6              	100.00%		H3G542              	100.00%
Bootstrap support for Q750U6 as seed ortholog is 99%.
Bootstrap support for H3G542 as seed ortholog is 84%.

Group of orthologs #1366. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q74Z32              	100.00%		H3G7Y0              	100.00%
Bootstrap support for Q74Z32 as seed ortholog is 100%.
Bootstrap support for H3G7Y0 as seed ortholog is 100%.

Group of orthologs #1367. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q750F6              	100.00%		H3GD54              	100.00%
Bootstrap support for Q750F6 as seed ortholog is 100%.
Bootstrap support for H3GD54 as seed ortholog is 100%.

Group of orthologs #1368. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q75DJ1              	100.00%		H3G844              	100.00%
Bootstrap support for Q75DJ1 as seed ortholog is 100%.
Bootstrap support for H3G844 as seed ortholog is 100%.

Group of orthologs #1369. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q758M0              	100.00%		H3GGE0              	100.00%
Bootstrap support for Q758M0 as seed ortholog is 100%.
Bootstrap support for H3GGE0 as seed ortholog is 100%.

Group of orthologs #1370. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:20

Q755K7              	100.00%		H3GQE7              	100.00%
Bootstrap support for Q755K7 as seed ortholog is 100%.
Bootstrap support for H3GQE7 as seed ortholog is 84%.

Group of orthologs #1371. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q75AT0              	100.00%		H3GMU6              	100.00%
Bootstrap support for Q75AT0 as seed ortholog is 100%.
Bootstrap support for H3GMU6 as seed ortholog is 100%.

Group of orthologs #1372. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q754Y4              	100.00%		H3GV43              	100.00%
Bootstrap support for Q754Y4 as seed ortholog is 100%.
Bootstrap support for H3GV43 as seed ortholog is 100%.

Group of orthologs #1373. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q754N0              	100.00%		H3GW61              	100.00%
Bootstrap support for Q754N0 as seed ortholog is 100%.
Bootstrap support for H3GW61 as seed ortholog is 100%.

Group of orthologs #1374. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.ramorum:96

Q74ZX1              	100.00%		H3HCF2              	100.00%
Bootstrap support for Q74ZX1 as seed ortholog is 100%.
Bootstrap support for H3HCF2 as seed ortholog is 100%.

Group of orthologs #1375. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75A62              	100.00%		H3GMI5              	100.00%
Q757Z0              	12.15%		H3GMI4              	68.09%
                    	       		H3H0J0              	38.87%
                    	       		H3GSH5              	21.71%
                    	       		H3GMJ8              	12.15%
                    	       		H3GGL0              	9.74%
Bootstrap support for Q75A62 as seed ortholog is 100%.
Bootstrap support for H3GMI5 as seed ortholog is 100%.

Group of orthologs #1376. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q753A7              	100.00%		H3GG85              	100.00%
Bootstrap support for Q753A7 as seed ortholog is 100%.
Bootstrap support for H3GG85 as seed ortholog is 100%.

Group of orthologs #1377. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75CA1              	100.00%		H3GG59              	100.00%
Bootstrap support for Q75CA1 as seed ortholog is 100%.
Bootstrap support for H3GG59 as seed ortholog is 100%.

Group of orthologs #1378. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75DB7              	100.00%		H3GGQ0              	100.00%
Bootstrap support for Q75DB7 as seed ortholog is 100%.
Bootstrap support for H3GGQ0 as seed ortholog is 100%.

Group of orthologs #1379. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75EH6              	100.00%		H3GGW5              	100.00%
Bootstrap support for Q75EH6 as seed ortholog is 100%.
Bootstrap support for H3GGW5 as seed ortholog is 100%.

Group of orthologs #1380. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75B44              	100.00%		H3GKL7              	100.00%
Bootstrap support for Q75B44 as seed ortholog is 100%.
Bootstrap support for H3GKL7 as seed ortholog is 100%.

Group of orthologs #1381. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75A09              	100.00%		H3GS81              	100.00%
Bootstrap support for Q75A09 as seed ortholog is 100%.
Bootstrap support for H3GS81 as seed ortholog is 100%.

Group of orthologs #1382. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.ramorum:95

Q75EE8              	100.00%		H3GQZ9              	100.00%
Bootstrap support for Q75EE8 as seed ortholog is 100%.
Bootstrap support for H3GQZ9 as seed ortholog is 100%.

Group of orthologs #1383. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:21 P.ramorum:40

Q754R3              	100.00%		H3HBF1              	100.00%
Bootstrap support for Q754R3 as seed ortholog is 74%.
Alternative seed ortholog is Q75B27 (21 bits away from this cluster)
Bootstrap support for H3HBF1 as seed ortholog is 90%.

Group of orthologs #1384. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q751Q4              	100.00%		H3GDN2              	100.00%
Q753U7              	100.00%		H3GSW4              	100.00%
                    	       		H3GYL7              	69.86%
                    	       		H3GPP9              	68.07%
                    	       		H3GYM0              	66.37%
                    	       		H3GPQ2              	62.43%
                    	       		H3GPQ0              	60.02%
                    	       		H3GNG0              	29.96%
                    	       		H3GZM7              	29.25%
                    	       		H3H8C2              	28.89%
                    	       		H3GBN3              	28.18%
                    	       		H3GGS4              	7.07%
Bootstrap support for Q751Q4 as seed ortholog is 100%.
Bootstrap support for Q753U7 as seed ortholog is 100%.
Bootstrap support for H3GDN2 as seed ortholog is 100%.
Bootstrap support for H3GSW4 as seed ortholog is 100%.

Group of orthologs #1385. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q75D24              	100.00%		H3HAX0              	100.00%
                    	       		H3GG51              	95.96%
                    	       		H3GCF2              	67.07%
                    	       		H3GY04              	63.03%
                    	       		H3GCF3              	41.41%
                    	       		H3GCF8              	40.00%
Bootstrap support for Q75D24 as seed ortholog is 100%.
Bootstrap support for H3HAX0 as seed ortholog is 100%.

Group of orthologs #1386. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:42

Q74ZF3              	100.00%		H3G6S7              	100.00%
Bootstrap support for Q74ZF3 as seed ortholog is 100%.
Bootstrap support for H3G6S7 as seed ortholog is 90%.

Group of orthologs #1387. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q752P7              	100.00%		H3G550              	100.00%
Bootstrap support for Q752P7 as seed ortholog is 100%.
Bootstrap support for H3G550 as seed ortholog is 100%.

Group of orthologs #1388. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q759X7              	100.00%		H3GFZ5              	100.00%
Bootstrap support for Q759X7 as seed ortholog is 100%.
Bootstrap support for H3GFZ5 as seed ortholog is 100%.

Group of orthologs #1389. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q75CW5              	100.00%		H3GHN9              	100.00%
Bootstrap support for Q75CW5 as seed ortholog is 100%.
Bootstrap support for H3GHN9 as seed ortholog is 100%.

Group of orthologs #1390. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q75C72              	100.00%		H3GT71              	100.00%
Bootstrap support for Q75C72 as seed ortholog is 100%.
Bootstrap support for H3GT71 as seed ortholog is 100%.

Group of orthologs #1391. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q75EV1              	100.00%		H3GWJ2              	100.00%
Bootstrap support for Q75EV1 as seed ortholog is 100%.
Bootstrap support for H3GWJ2 as seed ortholog is 100%.

Group of orthologs #1392. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.ramorum:94

Q758D5              	100.00%		H3HCY7              	100.00%
Bootstrap support for Q758D5 as seed ortholog is 100%.
Bootstrap support for H3HCY7 as seed ortholog is 100%.

Group of orthologs #1393. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:38 P.ramorum:93

Q757N8              	100.00%		H3HB48              	100.00%
                    	       		H3GK11              	19.81%
Bootstrap support for Q757N8 as seed ortholog is 91%.
Bootstrap support for H3HB48 as seed ortholog is 100%.

Group of orthologs #1394. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:14 P.ramorum:93

D8FGG1              	100.00%		H3GCA8              	100.00%
Bootstrap support for D8FGG1 as seed ortholog is 67%.
Alternative seed ortholog is Q755N3 (14 bits away from this cluster)
Bootstrap support for H3GCA8 as seed ortholog is 100%.

Group of orthologs #1395. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.ramorum:93

Q75B40              	100.00%		H3G7E0              	100.00%
Bootstrap support for Q75B40 as seed ortholog is 100%.
Bootstrap support for H3G7E0 as seed ortholog is 100%.

Group of orthologs #1396. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.ramorum:93

Q751U5              	100.00%		H3GHS4              	100.00%
Bootstrap support for Q751U5 as seed ortholog is 100%.
Bootstrap support for H3GHS4 as seed ortholog is 100%.

Group of orthologs #1397. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.ramorum:93

Q754L8              	100.00%		H3GH02              	100.00%
Bootstrap support for Q754L8 as seed ortholog is 100%.
Bootstrap support for H3GH02 as seed ortholog is 100%.

Group of orthologs #1398. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.ramorum:93

Q75EZ2              	100.00%		H3GHQ5              	100.00%
Bootstrap support for Q75EZ2 as seed ortholog is 100%.
Bootstrap support for H3GHQ5 as seed ortholog is 100%.

Group of orthologs #1399. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.ramorum:93

Q75BU0              	100.00%		H3GYG9              	100.00%
Bootstrap support for Q75BU0 as seed ortholog is 100%.
Bootstrap support for H3GYG9 as seed ortholog is 100%.

Group of orthologs #1400. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.ramorum:4

Q752L3              	100.00%		H3HDG7              	100.00%
Bootstrap support for Q752L3 as seed ortholog is 53%.
Alternative seed ortholog is Q75B64 (1 bits away from this cluster)
Bootstrap support for H3HDG7 as seed ortholog is 53%.
Alternative seed ortholog is H3H6J3 (4 bits away from this cluster)

Group of orthologs #1401. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q759B8              	100.00%		H3GFC9              	100.00%
Q75A69              	13.10%		
Bootstrap support for Q759B8 as seed ortholog is 100%.
Bootstrap support for H3GFC9 as seed ortholog is 100%.

Group of orthologs #1402. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q75DI1              	100.00%		H3HE77              	100.00%
                    	       		H3HE76              	6.24%
Bootstrap support for Q75DI1 as seed ortholog is 100%.
Bootstrap support for H3HE77 as seed ortholog is 100%.

Group of orthologs #1403. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q750Y9              	100.00%		H3G545              	100.00%
Bootstrap support for Q750Y9 as seed ortholog is 100%.
Bootstrap support for H3G545 as seed ortholog is 100%.

Group of orthologs #1404. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q751F1              	100.00%		H3G8V2              	100.00%
Bootstrap support for Q751F1 as seed ortholog is 100%.
Bootstrap support for H3G8V2 as seed ortholog is 100%.

Group of orthologs #1405. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q75BV8              	100.00%		H3G809              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for H3G809 as seed ortholog is 100%.

Group of orthologs #1406. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q74ZK2              	100.00%		H3GQR8              	100.00%
Bootstrap support for Q74ZK2 as seed ortholog is 100%.
Bootstrap support for H3GQR8 as seed ortholog is 100%.

Group of orthologs #1407. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q751Z5              	100.00%		H3GRJ7              	100.00%
Bootstrap support for Q751Z5 as seed ortholog is 100%.
Bootstrap support for H3GRJ7 as seed ortholog is 100%.

Group of orthologs #1408. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q75DL2              	100.00%		H3GJ58              	100.00%
Bootstrap support for Q75DL2 as seed ortholog is 100%.
Bootstrap support for H3GJ58 as seed ortholog is 100%.

Group of orthologs #1409. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q75A14              	100.00%		H3GWU4              	100.00%
Bootstrap support for Q75A14 as seed ortholog is 100%.
Bootstrap support for H3GWU4 as seed ortholog is 100%.

Group of orthologs #1410. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:21

Q75D93              	100.00%		H3GUX4              	100.00%
Bootstrap support for Q75D93 as seed ortholog is 100%.
Bootstrap support for H3GUX4 as seed ortholog is 72%.
Alternative seed ortholog is H3HDG4 (21 bits away from this cluster)

Group of orthologs #1411. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q757C1              	100.00%		H3H2Y2              	100.00%
Bootstrap support for Q757C1 as seed ortholog is 100%.
Bootstrap support for H3H2Y2 as seed ortholog is 100%.

Group of orthologs #1412. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.ramorum:92

Q752P6              	100.00%		H3HBI0              	100.00%
Bootstrap support for Q752P6 as seed ortholog is 100%.
Bootstrap support for H3HBI0 as seed ortholog is 100%.

Group of orthologs #1413. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:19 P.ramorum:91

Q74Z33              	100.00%		H3GIR3              	100.00%
                    	       		H3G8W3              	48.23%
                    	       		H3GB45              	48.23%
                    	       		H3H7P7              	45.76%
                    	       		H3GDL1              	36.40%
                    	       		H3G5J8              	29.33%
                    	       		H3GDX5              	28.27%
                    	       		H3GIR5              	26.68%
                    	       		H3GIR6              	26.33%
                    	       		H3HA53              	19.43%
Bootstrap support for Q74Z33 as seed ortholog is 65%.
Alternative seed ortholog is Q754K6 (19 bits away from this cluster)
Bootstrap support for H3GIR3 as seed ortholog is 100%.

Group of orthologs #1414. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.ramorum:8

Q755Z4              	100.00%		H3GTP5              	100.00%
                    	       		H3GTQ0              	77.95%
                    	       		H3H818              	71.18%
                    	       		H3H3J2              	50.44%
Bootstrap support for Q755Z4 as seed ortholog is 90%.
Bootstrap support for H3GTP5 as seed ortholog is 63%.
Alternative seed ortholog is H3H6J3 (8 bits away from this cluster)

Group of orthologs #1415. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q756X3              	100.00%		H3G881              	100.00%
Bootstrap support for Q756X3 as seed ortholog is 100%.
Bootstrap support for H3G881 as seed ortholog is 100%.

Group of orthologs #1416. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q750M4              	100.00%		H3GEG6              	100.00%
Bootstrap support for Q750M4 as seed ortholog is 100%.
Bootstrap support for H3GEG6 as seed ortholog is 100%.

Group of orthologs #1417. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q754S2              	100.00%		H3GGL5              	100.00%
Bootstrap support for Q754S2 as seed ortholog is 100%.
Bootstrap support for H3GGL5 as seed ortholog is 100%.

Group of orthologs #1418. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q75ED1              	100.00%		H3GAK0              	100.00%
Bootstrap support for Q75ED1 as seed ortholog is 100%.
Bootstrap support for H3GAK0 as seed ortholog is 100%.

Group of orthologs #1419. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q755N6              	100.00%		H3GPH7              	100.00%
Bootstrap support for Q755N6 as seed ortholog is 100%.
Bootstrap support for H3GPH7 as seed ortholog is 100%.

Group of orthologs #1420. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q75CM1              	100.00%		H3GJY0              	100.00%
Bootstrap support for Q75CM1 as seed ortholog is 100%.
Bootstrap support for H3GJY0 as seed ortholog is 100%.

Group of orthologs #1421. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.ramorum:91

Q757M3              	100.00%		H3GUB6              	100.00%
Bootstrap support for Q757M3 as seed ortholog is 100%.
Bootstrap support for H3GUB6 as seed ortholog is 100%.

Group of orthologs #1422. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:22 P.ramorum:91

Q759T8              	100.00%		H3HAR5              	100.00%
Bootstrap support for Q759T8 as seed ortholog is 78%.
Bootstrap support for H3HAR5 as seed ortholog is 100%.

Group of orthologs #1423. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.ramorum:90

Q74ZM7              	100.00%		H3GM03              	100.00%
Bootstrap support for Q74ZM7 as seed ortholog is 100%.
Bootstrap support for H3GM03 as seed ortholog is 100%.

Group of orthologs #1424. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.ramorum:90

Q753K6              	100.00%		H3GPH0              	100.00%
Bootstrap support for Q753K6 as seed ortholog is 100%.
Bootstrap support for H3GPH0 as seed ortholog is 100%.

Group of orthologs #1425. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.ramorum:90

Q75DI7              	100.00%		H3HAY4              	100.00%
Bootstrap support for Q75DI7 as seed ortholog is 100%.
Bootstrap support for H3HAY4 as seed ortholog is 100%.

Group of orthologs #1426. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:31 P.ramorum:27

Q752A7              	100.00%		H3GMQ5              	100.00%
Q752A8              	100.00%		H3GH90              	100.00%
Q753U5              	100.00%		H3GMQ4              	100.00%
Q74Z84              	40.69%		H3GMQ2              	92.41%
Q750B8              	35.57%		H3GMQ3              	90.38%
Q750B9              	33.54%		H3H6B3              	73.98%
Q750B7              	33.45%		H3GH89              	73.16%
Q751X7              	33.36%		H3GMY7              	57.47%
Q75B49              	29.39%		H3H5E6              	30.20%
Q754B4              	25.62%		
Q75CQ4              	25.62%		
Q75EP1              	19.67%		
Q750W0              	18.11%		
Bootstrap support for Q752A7 as seed ortholog is 75%.
Bootstrap support for Q752A8 as seed ortholog is 68%.
Alternative seed ortholog is Q755A6 (31 bits away from this cluster)
Bootstrap support for Q753U5 as seed ortholog is 60%.
Alternative seed ortholog is Q755A6 (31 bits away from this cluster)
Bootstrap support for H3GMQ5 as seed ortholog is 75%.
Bootstrap support for H3GH90 as seed ortholog is 51%.
Alternative seed ortholog is H3GS51 (27 bits away from this cluster)
Bootstrap support for H3GMQ4 as seed ortholog is 100%.

Group of orthologs #1427. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q759W0              	100.00%		H3GQJ1              	100.00%
                    	       		H3GQH4              	36.52%
                    	       		H3GES5              	36.52%
                    	       		H3GQH3              	35.48%
                    	       		H3GES4              	34.96%
                    	       		H3GAC8              	30.39%
Bootstrap support for Q759W0 as seed ortholog is 100%.
Bootstrap support for H3GQJ1 as seed ortholog is 100%.

Group of orthologs #1428. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q75F19              	100.00%		H3GME2              	100.00%
                    	       		H3GF33              	12.62%
                    	       		H3GX89              	11.45%
Bootstrap support for Q75F19 as seed ortholog is 100%.
Bootstrap support for H3GME2 as seed ortholog is 100%.

Group of orthologs #1429. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q74ZD8              	100.00%		H3G5A1              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for H3G5A1 as seed ortholog is 100%.

Group of orthologs #1430. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q74Z52              	100.00%		H3G7J4              	100.00%
Bootstrap support for Q74Z52 as seed ortholog is 100%.
Bootstrap support for H3G7J4 as seed ortholog is 100%.

Group of orthologs #1431. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q755I6              	100.00%		H3G707              	100.00%
Bootstrap support for Q755I6 as seed ortholog is 100%.
Bootstrap support for H3G707 as seed ortholog is 100%.

Group of orthologs #1432. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q753N1              	100.00%		H3GCH0              	100.00%
Bootstrap support for Q753N1 as seed ortholog is 100%.
Bootstrap support for H3GCH0 as seed ortholog is 100%.

Group of orthologs #1433. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q751H4              	100.00%		H3GGZ8              	100.00%
Bootstrap support for Q751H4 as seed ortholog is 100%.
Bootstrap support for H3GGZ8 as seed ortholog is 100%.

Group of orthologs #1434. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q75DZ3              	100.00%		H3G7D9              	100.00%
Bootstrap support for Q75DZ3 as seed ortholog is 100%.
Bootstrap support for H3G7D9 as seed ortholog is 100%.

Group of orthologs #1435. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q75CF1              	100.00%		H3GA26              	100.00%
Bootstrap support for Q75CF1 as seed ortholog is 100%.
Bootstrap support for H3GA26 as seed ortholog is 100%.

Group of orthologs #1436. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q75ET7              	100.00%		H3GJ23              	100.00%
Bootstrap support for Q75ET7 as seed ortholog is 100%.
Bootstrap support for H3GJ23 as seed ortholog is 100%.

Group of orthologs #1437. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.ramorum:89

Q75AY7              	100.00%		H3GWJ4              	100.00%
Bootstrap support for Q75AY7 as seed ortholog is 100%.
Bootstrap support for H3GWJ4 as seed ortholog is 100%.

Group of orthologs #1438. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.ramorum:88

Q754Z9              	100.00%		H3GVD1              	100.00%
Bootstrap support for Q754Z9 as seed ortholog is 100%.
Bootstrap support for H3GVD1 as seed ortholog is 100%.

Group of orthologs #1439. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.ramorum:88

Q752F0              	100.00%		H3GXK1              	100.00%
Bootstrap support for Q752F0 as seed ortholog is 100%.
Bootstrap support for H3GXK1 as seed ortholog is 100%.

Group of orthologs #1440. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.ramorum:47

Q75EL6              	100.00%		H3HD35              	100.00%
Bootstrap support for Q75EL6 as seed ortholog is 100%.
Bootstrap support for H3HD35 as seed ortholog is 99%.

Group of orthologs #1441. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75BZ3              	100.00%		H3HA43              	100.00%
                    	       		H3HEF4              	95.62%
Bootstrap support for Q75BZ3 as seed ortholog is 100%.
Bootstrap support for H3HA43 as seed ortholog is 100%.

Group of orthologs #1442. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q751K2              	100.00%		H3G5G4              	100.00%
Bootstrap support for Q751K2 as seed ortholog is 100%.
Bootstrap support for H3G5G4 as seed ortholog is 100%.

Group of orthologs #1443. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q752N1              	100.00%		H3GFJ6              	100.00%
Bootstrap support for Q752N1 as seed ortholog is 100%.
Bootstrap support for H3GFJ6 as seed ortholog is 100%.

Group of orthologs #1444. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:34

Q754B3              	100.00%		H3GFP9              	100.00%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for H3GFP9 as seed ortholog is 91%.

Group of orthologs #1445. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q759X3              	100.00%		H3GCB5              	100.00%
Bootstrap support for Q759X3 as seed ortholog is 100%.
Bootstrap support for H3GCB5 as seed ortholog is 100%.

Group of orthologs #1446. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75DV3              	100.00%		H3GCZ2              	100.00%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for H3GCZ2 as seed ortholog is 100%.

Group of orthologs #1447. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75BY9              	100.00%		H3GF06              	100.00%
Bootstrap support for Q75BY9 as seed ortholog is 100%.
Bootstrap support for H3GF06 as seed ortholog is 100%.

Group of orthologs #1448. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q753N4              	100.00%		H3GXF2              	100.00%
Bootstrap support for Q753N4 as seed ortholog is 100%.
Bootstrap support for H3GXF2 as seed ortholog is 100%.

Group of orthologs #1449. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q755Q7              	100.00%		H3GWJ9              	100.00%
Bootstrap support for Q755Q7 as seed ortholog is 100%.
Bootstrap support for H3GWJ9 as seed ortholog is 100%.

Group of orthologs #1450. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75C70              	100.00%		H3GSL7              	100.00%
Bootstrap support for Q75C70 as seed ortholog is 100%.
Bootstrap support for H3GSL7 as seed ortholog is 100%.

Group of orthologs #1451. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75F52              	100.00%		H3GX87              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 100%.
Bootstrap support for H3GX87 as seed ortholog is 100%.

Group of orthologs #1452. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:33 P.ramorum:87

Q75C54              	100.00%		H3H6J4              	100.00%
Bootstrap support for Q75C54 as seed ortholog is 87%.
Bootstrap support for H3H6J4 as seed ortholog is 100%.

Group of orthologs #1453. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75BE9              	100.00%		H3HB68              	100.00%
Bootstrap support for Q75BE9 as seed ortholog is 100%.
Bootstrap support for H3HB68 as seed ortholog is 100%.

Group of orthologs #1454. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.ramorum:87

Q75C08              	100.00%		H3HBL2              	100.00%
Bootstrap support for Q75C08 as seed ortholog is 100%.
Bootstrap support for H3HBL2 as seed ortholog is 100%.

Group of orthologs #1455. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:43

Q750D9              	100.00%		H3GLD6              	100.00%
Bootstrap support for Q750D9 as seed ortholog is 100%.
Bootstrap support for H3GLD6 as seed ortholog is 85%.

Group of orthologs #1456. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q755H0              	100.00%		H3GK10              	100.00%
Bootstrap support for Q755H0 as seed ortholog is 100%.
Bootstrap support for H3GK10 as seed ortholog is 100%.

Group of orthologs #1457. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q752D8              	100.00%		H3GP02              	100.00%
Bootstrap support for Q752D8 as seed ortholog is 100%.
Bootstrap support for H3GP02 as seed ortholog is 100%.

Group of orthologs #1458. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q75EH4              	100.00%		H3GGU8              	100.00%
Bootstrap support for Q75EH4 as seed ortholog is 100%.
Bootstrap support for H3GGU8 as seed ortholog is 100%.

Group of orthologs #1459. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q755C6              	100.00%		H3GRN5              	100.00%
Bootstrap support for Q755C6 as seed ortholog is 100%.
Bootstrap support for H3GRN5 as seed ortholog is 100%.

Group of orthologs #1460. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q75BE0              	100.00%		H3GQC9              	100.00%
Bootstrap support for Q75BE0 as seed ortholog is 100%.
Bootstrap support for H3GQC9 as seed ortholog is 100%.

Group of orthologs #1461. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q75AD0              	100.00%		H3GYK3              	100.00%
Bootstrap support for Q75AD0 as seed ortholog is 100%.
Bootstrap support for H3GYK3 as seed ortholog is 100%.

Group of orthologs #1462. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q759U3              	100.00%		H3H4G5              	100.00%
Bootstrap support for Q759U3 as seed ortholog is 100%.
Bootstrap support for H3H4G5 as seed ortholog is 100%.

Group of orthologs #1463. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q75EU5              	100.00%		H3HAV5              	100.00%
Bootstrap support for Q75EU5 as seed ortholog is 100%.
Bootstrap support for H3HAV5 as seed ortholog is 100%.

Group of orthologs #1464. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.ramorum:86

Q75C00              	100.00%		H3HDT2              	100.00%
Bootstrap support for Q75C00 as seed ortholog is 100%.
Bootstrap support for H3HDT2 as seed ortholog is 100%.

Group of orthologs #1465. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:85

Q75CL0              	100.00%		H3GQW3              	100.00%
                    	       		H3GQX1              	41.41%
                    	       		H3GQW4              	41.20%
                    	       		H3GQX3              	33.94%
Bootstrap support for Q75CL0 as seed ortholog is 100%.
Bootstrap support for H3GQW3 as seed ortholog is 100%.

Group of orthologs #1466. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:85

Q75BS0              	100.00%		H3GZR3              	100.00%
                    	       		H3GML1              	18.14%
                    	       		H3GML0              	15.69%
                    	       		H3G4Z4              	12.50%
Bootstrap support for Q75BS0 as seed ortholog is 100%.
Bootstrap support for H3GZR3 as seed ortholog is 100%.

Group of orthologs #1467. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:85

Q75AA5              	100.00%		H3GGX7              	100.00%
Bootstrap support for Q75AA5 as seed ortholog is 100%.
Bootstrap support for H3GGX7 as seed ortholog is 100%.

Group of orthologs #1468. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:85

Q75AZ1              	100.00%		H3GHZ7              	100.00%
Bootstrap support for Q75AZ1 as seed ortholog is 100%.
Bootstrap support for H3GHZ7 as seed ortholog is 100%.

Group of orthologs #1469. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:40

Q75CL8              	100.00%		H3GJ54              	100.00%
Bootstrap support for Q75CL8 as seed ortholog is 100%.
Bootstrap support for H3GJ54 as seed ortholog is 85%.

Group of orthologs #1470. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:36

Q759V6              	100.00%		H3GVW1              	100.00%
Bootstrap support for Q759V6 as seed ortholog is 100%.
Bootstrap support for H3GVW1 as seed ortholog is 93%.

Group of orthologs #1471. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.ramorum:85

Q75B19              	100.00%		H3GWE3              	100.00%
Bootstrap support for Q75B19 as seed ortholog is 100%.
Bootstrap support for H3GWE3 as seed ortholog is 100%.

Group of orthologs #1472. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:84

Q753F7              	100.00%		H3HBA7              	100.00%
Q75DZ7              	31.85%		H3H0S7              	38.84%
Q751G5              	12.67%		
Bootstrap support for Q753F7 as seed ortholog is 100%.
Bootstrap support for H3HBA7 as seed ortholog is 100%.

Group of orthologs #1473. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:84

Q750W4              	100.00%		H3G781              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for H3G781 as seed ortholog is 100%.

Group of orthologs #1474. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:34 P.ramorum:84

Q751A5              	100.00%		H3G9H2              	100.00%
Bootstrap support for Q751A5 as seed ortholog is 91%.
Bootstrap support for H3G9H2 as seed ortholog is 100%.

Group of orthologs #1475. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:84

Q757J7              	100.00%		H3G666              	100.00%
Bootstrap support for Q757J7 as seed ortholog is 100%.
Bootstrap support for H3G666 as seed ortholog is 100%.

Group of orthologs #1476. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:84

Q75BB9              	100.00%		H3G733              	100.00%
Bootstrap support for Q75BB9 as seed ortholog is 100%.
Bootstrap support for H3G733 as seed ortholog is 100%.

Group of orthologs #1477. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:9

Q75D46              	100.00%		H3GGZ3              	100.00%
Bootstrap support for Q75D46 as seed ortholog is 100%.
Bootstrap support for H3GGZ3 as seed ortholog is 54%.
Alternative seed ortholog is H3GVV5 (9 bits away from this cluster)

Group of orthologs #1478. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:84

Q75EQ2              	100.00%		H3GIH3              	100.00%
Bootstrap support for Q75EQ2 as seed ortholog is 100%.
Bootstrap support for H3GIH3 as seed ortholog is 100%.

Group of orthologs #1479. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.ramorum:84

Q75AU6              	100.00%		H3GRD9              	100.00%
Bootstrap support for Q75AU6 as seed ortholog is 100%.
Bootstrap support for H3GRD9 as seed ortholog is 100%.

Group of orthologs #1480. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.ramorum:83

Q753Q9              	100.00%		H3GKG5              	100.00%
                    	       		H3GKL9              	36.38%
                    	       		H3GKM0              	35.97%
                    	       		H3GKM2              	30.11%
                    	       		H3GWE6              	26.93%
                    	       		H3HBY4              	25.18%
                    	       		H3H7A8              	20.86%
                    	       		H3H0D6              	13.26%
                    	       		H3GI78              	10.07%
Bootstrap support for Q753Q9 as seed ortholog is 100%.
Bootstrap support for H3GKG5 as seed ortholog is 100%.

Group of orthologs #1481. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.ramorum:83

Q758H2              	100.00%		H3GAW2              	100.00%
                    	       		H3GB35              	100.00%
                    	       		H3H4G7              	100.00%
                    	       		H3GFV7              	57.84%
Bootstrap support for Q758H2 as seed ortholog is 100%.
Bootstrap support for H3GAW2 as seed ortholog is 100%.
Bootstrap support for H3GB35 as seed ortholog is 100%.
Bootstrap support for H3H4G7 as seed ortholog is 100%.

Group of orthologs #1482. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.ramorum:83

Q758B4              	100.00%		H3G5H3              	100.00%
Bootstrap support for Q758B4 as seed ortholog is 100%.
Bootstrap support for H3G5H3 as seed ortholog is 100%.

Group of orthologs #1483. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.ramorum:83

Q750E1              	100.00%		H3H1K0              	100.00%
Bootstrap support for Q750E1 as seed ortholog is 100%.
Bootstrap support for H3H1K0 as seed ortholog is 100%.

Group of orthologs #1484. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:27 P.ramorum:12

Q75AW7              	100.00%		H3GTM4              	100.00%
Bootstrap support for Q75AW7 as seed ortholog is 80%.
Bootstrap support for H3GTM4 as seed ortholog is 63%.
Alternative seed ortholog is H3GJU8 (12 bits away from this cluster)

Group of orthologs #1485. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.ramorum:83

Q751N7              	100.00%		H3HBG5              	100.00%
Bootstrap support for Q751N7 as seed ortholog is 100%.
Bootstrap support for H3HBG5 as seed ortholog is 100%.

Group of orthologs #1486. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:82

Q75BL6              	100.00%		H3G538              	100.00%
Bootstrap support for Q75BL6 as seed ortholog is 100%.
Bootstrap support for H3G538 as seed ortholog is 100%.

Group of orthologs #1487. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:32

Q75BF2              	100.00%		H3GHM4              	100.00%
Bootstrap support for Q75BF2 as seed ortholog is 100%.
Bootstrap support for H3GHM4 as seed ortholog is 87%.

Group of orthologs #1488. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:82

Q75DS4              	100.00%		H3GUI4              	100.00%
Bootstrap support for Q75DS4 as seed ortholog is 100%.
Bootstrap support for H3GUI4 as seed ortholog is 100%.

Group of orthologs #1489. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:82

Q753C1              	100.00%		H3HBL0              	100.00%
Bootstrap support for Q753C1 as seed ortholog is 100%.
Bootstrap support for H3HBL0 as seed ortholog is 100%.

Group of orthologs #1490. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.ramorum:25

Q75CS9              	100.00%		H3HDC8              	100.00%
Bootstrap support for Q75CS9 as seed ortholog is 100%.
Bootstrap support for H3HDC8 as seed ortholog is 71%.
Alternative seed ortholog is H3GM43 (25 bits away from this cluster)

Group of orthologs #1491. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:28

Q75E80              	100.00%		H3H2B6              	100.00%
                    	       		H3GGN2              	93.35%
Bootstrap support for Q75E80 as seed ortholog is 100%.
Bootstrap support for H3H2B6 as seed ortholog is 83%.

Group of orthologs #1492. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:81

Q757G1              	100.00%		H3G4Y3              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for H3G4Y3 as seed ortholog is 100%.

Group of orthologs #1493. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:81

Q756Y9              	100.00%		H3G937              	100.00%
Bootstrap support for Q756Y9 as seed ortholog is 100%.
Bootstrap support for H3G937 as seed ortholog is 100%.

Group of orthologs #1494. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:81

Q75DG9              	100.00%		H3GBS5              	100.00%
Bootstrap support for Q75DG9 as seed ortholog is 100%.
Bootstrap support for H3GBS5 as seed ortholog is 100%.

Group of orthologs #1495. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:81

Q756B6              	100.00%		H3GT07              	100.00%
Bootstrap support for Q756B6 as seed ortholog is 100%.
Bootstrap support for H3GT07 as seed ortholog is 100%.

Group of orthologs #1496. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:31

Q74ZD3              	100.00%		H3GYJ7              	100.00%
Bootstrap support for Q74ZD3 as seed ortholog is 100%.
Bootstrap support for H3GYJ7 as seed ortholog is 84%.

Group of orthologs #1497. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:25

Q754T0              	100.00%		H3GXB7              	100.00%
Bootstrap support for Q754T0 as seed ortholog is 100%.
Bootstrap support for H3GXB7 as seed ortholog is 75%.

Group of orthologs #1498. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:81

Q75CV5              	100.00%		H3GS75              	100.00%
Bootstrap support for Q75CV5 as seed ortholog is 100%.
Bootstrap support for H3GS75 as seed ortholog is 100%.

Group of orthologs #1499. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.ramorum:81

Q757B0              	100.00%		H3HBE8              	100.00%
Bootstrap support for Q757B0 as seed ortholog is 100%.
Bootstrap support for H3HBE8 as seed ortholog is 100%.

Group of orthologs #1500. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q752S9              	100.00%		H3H6F1              	100.00%
                    	       		H3H6H1              	48.73%
                    	       		H3H6F5              	47.53%
Bootstrap support for Q752S9 as seed ortholog is 100%.
Bootstrap support for H3H6F1 as seed ortholog is 100%.

Group of orthologs #1501. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q75CB9              	100.00%		H3G8I8              	100.00%
                    	       		H3H5F1              	18.53%
Bootstrap support for Q75CB9 as seed ortholog is 100%.
Bootstrap support for H3G8I8 as seed ortholog is 100%.

Group of orthologs #1502. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q751L5              	100.00%		H3H379              	100.00%
                    	       		H3G567              	59.56%
Bootstrap support for Q751L5 as seed ortholog is 100%.
Bootstrap support for H3H379 as seed ortholog is 100%.

Group of orthologs #1503. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q751K8              	100.00%		H3GML8              	100.00%
Bootstrap support for Q751K8 as seed ortholog is 100%.
Bootstrap support for H3GML8 as seed ortholog is 100%.

Group of orthologs #1504. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q758S3              	100.00%		H3GM96              	100.00%
Bootstrap support for Q758S3 as seed ortholog is 100%.
Bootstrap support for H3GM96 as seed ortholog is 100%.

Group of orthologs #1505. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q74ZL0              	100.00%		H3GUC2              	100.00%
Bootstrap support for Q74ZL0 as seed ortholog is 100%.
Bootstrap support for H3GUC2 as seed ortholog is 100%.

Group of orthologs #1506. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:16

Q752F5              	100.00%		H3GSF5              	100.00%
Bootstrap support for Q752F5 as seed ortholog is 100%.
Bootstrap support for H3GSF5 as seed ortholog is 63%.
Alternative seed ortholog is H3GVJ8 (16 bits away from this cluster)

Group of orthologs #1507. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:80

Q757M9              	100.00%		H3GTZ6              	100.00%
Bootstrap support for Q757M9 as seed ortholog is 100%.
Bootstrap support for H3GTZ6 as seed ortholog is 100%.

Group of orthologs #1508. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.ramorum:32

Q75BI2              	100.00%		H3HC29              	100.00%
Bootstrap support for Q75BI2 as seed ortholog is 100%.
Bootstrap support for H3HC29 as seed ortholog is 65%.
Alternative seed ortholog is H3GSV6 (32 bits away from this cluster)

Group of orthologs #1509. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:25 P.ramorum:79

Q757P2              	100.00%		H3GXV6              	100.00%
Q755W3              	30.26%		H3GXW0              	100.00%
                    	       		H3GXV8              	74.73%
                    	       		H3GFL3              	58.02%
                    	       		H3GQA0              	51.51%
                    	       		H3GDW2              	33.62%
Bootstrap support for Q757P2 as seed ortholog is 70%.
Alternative seed ortholog is Q75CJ2 (25 bits away from this cluster)
Bootstrap support for H3GXV6 as seed ortholog is 100%.
Bootstrap support for H3GXW0 as seed ortholog is 100%.

Group of orthologs #1510. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q75DE1              	100.00%		H3GFK0              	100.00%
                    	       		H3GGZ6              	100.00%
Bootstrap support for Q75DE1 as seed ortholog is 100%.
Bootstrap support for H3GFK0 as seed ortholog is 100%.
Bootstrap support for H3GGZ6 as seed ortholog is 100%.

Group of orthologs #1511. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q74ZJ1              	100.00%		H3GFY1              	100.00%
Bootstrap support for Q74ZJ1 as seed ortholog is 100%.
Bootstrap support for H3GFY1 as seed ortholog is 100%.

Group of orthologs #1512. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q74Z19              	100.00%		H3GJP6              	100.00%
Bootstrap support for Q74Z19 as seed ortholog is 100%.
Bootstrap support for H3GJP6 as seed ortholog is 100%.

Group of orthologs #1513. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q756E9              	100.00%		H3GHB9              	100.00%
Bootstrap support for Q756E9 as seed ortholog is 100%.
Bootstrap support for H3GHB9 as seed ortholog is 100%.

Group of orthologs #1514. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q752J8              	100.00%		H3GKS2              	100.00%
Bootstrap support for Q752J8 as seed ortholog is 100%.
Bootstrap support for H3GKS2 as seed ortholog is 100%.

Group of orthologs #1515. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q75CT6              	100.00%		H3GZK0              	100.00%
Bootstrap support for Q75CT6 as seed ortholog is 100%.
Bootstrap support for H3GZK0 as seed ortholog is 100%.

Group of orthologs #1516. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.ramorum:79

Q75CH5              	100.00%		H3HEE5              	100.00%
Bootstrap support for Q75CH5 as seed ortholog is 100%.
Bootstrap support for H3HEE5 as seed ortholog is 100%.

Group of orthologs #1517. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q754S1              	100.00%		H3GA66              	100.00%
                    	       		H3GB57              	98.57%
                    	       		H3H1Q7              	10.48%
                    	       		H3GCE4              	5.56%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for H3GA66 as seed ortholog is 100%.

Group of orthologs #1518. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q752L5              	100.00%		H3G8J0              	100.00%
                    	       		H3GAT4              	11.75%
                    	       		H3GRQ1              	10.00%
Bootstrap support for Q752L5 as seed ortholog is 100%.
Bootstrap support for H3G8J0 as seed ortholog is 100%.

Group of orthologs #1519. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q74ZE9              	100.00%		H3GFN0              	100.00%
                    	       		H3GFM7              	56.15%
Bootstrap support for Q74ZE9 as seed ortholog is 100%.
Bootstrap support for H3GFN0 as seed ortholog is 100%.

Group of orthologs #1520. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q758D8              	100.00%		H3G5I2              	100.00%
Bootstrap support for Q758D8 as seed ortholog is 100%.
Bootstrap support for H3G5I2 as seed ortholog is 100%.

Group of orthologs #1521. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q755X6              	100.00%		H3GJ28              	100.00%
Bootstrap support for Q755X6 as seed ortholog is 100%.
Bootstrap support for H3GJ28 as seed ortholog is 100%.

Group of orthologs #1522. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q75E92              	100.00%		H3GD70              	100.00%
Bootstrap support for Q75E92 as seed ortholog is 100%.
Bootstrap support for H3GD70 as seed ortholog is 100%.

Group of orthologs #1523. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q753R0              	100.00%		H3GY73              	100.00%
Bootstrap support for Q753R0 as seed ortholog is 100%.
Bootstrap support for H3GY73 as seed ortholog is 100%.

Group of orthologs #1524. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.ramorum:78

Q75AY8              	100.00%		H3GVV6              	100.00%
Bootstrap support for Q75AY8 as seed ortholog is 100%.
Bootstrap support for H3GVV6 as seed ortholog is 100%.

Group of orthologs #1525. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q75D69              	100.00%		H3GF48              	100.00%
Q74Z78              	20.38%		H3GF53              	43.67%
Q75A39              	6.36%		H3GF52              	41.69%
                    	       		H3GF98              	40.74%
                    	       		H3GF50              	40.05%
                    	       		H3GF49              	36.61%
Bootstrap support for Q75D69 as seed ortholog is 100%.
Bootstrap support for H3GF48 as seed ortholog is 100%.

Group of orthologs #1526. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q751W5              	100.00%		H3G8S4              	100.00%
                    	       		H3G9V5              	100.00%
                    	       		H3GVQ3              	9.92%
Bootstrap support for Q751W5 as seed ortholog is 100%.
Bootstrap support for H3G8S4 as seed ortholog is 100%.
Bootstrap support for H3G9V5 as seed ortholog is 100%.

Group of orthologs #1527. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q755Q3              	100.00%		H3GAY5              	100.00%
                    	       		H3H4T8              	100.00%
Bootstrap support for Q755Q3 as seed ortholog is 100%.
Bootstrap support for H3GAY5 as seed ortholog is 100%.
Bootstrap support for H3H4T8 as seed ortholog is 100%.

Group of orthologs #1528. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:22

Q75C41              	100.00%		H3HC90              	100.00%
                    	       		H3GMP9              	39.05%
Bootstrap support for Q75C41 as seed ortholog is 100%.
Bootstrap support for H3HC90 as seed ortholog is 68%.
Alternative seed ortholog is H3GEI5 (22 bits away from this cluster)

Group of orthologs #1529. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:28

Q755M6              	100.00%		H3GH42              	100.00%
Bootstrap support for Q755M6 as seed ortholog is 100%.
Bootstrap support for H3GH42 as seed ortholog is 89%.

Group of orthologs #1530. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q75BK6              	100.00%		H3GMN0              	100.00%
Bootstrap support for Q75BK6 as seed ortholog is 100%.
Bootstrap support for H3GMN0 as seed ortholog is 100%.

Group of orthologs #1531. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q75D20              	100.00%		H3GLZ6              	100.00%
Bootstrap support for Q75D20 as seed ortholog is 100%.
Bootstrap support for H3GLZ6 as seed ortholog is 100%.

Group of orthologs #1532. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q75CV4              	100.00%		H3HAQ1              	100.00%
Bootstrap support for Q75CV4 as seed ortholog is 100%.
Bootstrap support for H3HAQ1 as seed ortholog is 100%.

Group of orthologs #1533. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.ramorum:77

Q75CB1              	100.00%		H3HDR8              	100.00%
Bootstrap support for Q75CB1 as seed ortholog is 100%.
Bootstrap support for H3HDR8 as seed ortholog is 100%.

Group of orthologs #1534. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q75EY9              	100.00%		H3H8P8              	100.00%
                    	       		H3H1G1              	75.18%
Bootstrap support for Q75EY9 as seed ortholog is 100%.
Bootstrap support for H3H8P8 as seed ortholog is 100%.

Group of orthologs #1535. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q759N5              	100.00%		H3G6K1              	100.00%
Bootstrap support for Q759N5 as seed ortholog is 100%.
Bootstrap support for H3G6K1 as seed ortholog is 100%.

Group of orthologs #1536. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q75BT4              	100.00%		H3G5M1              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for H3G5M1 as seed ortholog is 100%.

Group of orthologs #1537. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q75A22              	100.00%		H3GBN0              	100.00%
Bootstrap support for Q75A22 as seed ortholog is 100%.
Bootstrap support for H3GBN0 as seed ortholog is 100%.

Group of orthologs #1538. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q75CR6              	100.00%		H3GBW5              	100.00%
Bootstrap support for Q75CR6 as seed ortholog is 100%.
Bootstrap support for H3GBW5 as seed ortholog is 100%.

Group of orthologs #1539. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q75CR5              	100.00%		H3GRS3              	100.00%
Bootstrap support for Q75CR5 as seed ortholog is 100%.
Bootstrap support for H3GRS3 as seed ortholog is 100%.

Group of orthologs #1540. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q755P0              	100.00%		H3HCS3              	100.00%
Bootstrap support for Q755P0 as seed ortholog is 100%.
Bootstrap support for H3HCS3 as seed ortholog is 100%.

Group of orthologs #1541. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.ramorum:76

Q75AB6              	100.00%		H3HBG9              	100.00%
Bootstrap support for Q75AB6 as seed ortholog is 100%.
Bootstrap support for H3HBG9 as seed ortholog is 100%.

Group of orthologs #1542. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:17

Q75DB1              	82.71%		H3H2D3              	100.00%
Q75CX5              	100.00%		H3H590              	100.00%
Q75DB2              	82.71%		H3H2D1              	97.72%
Q75CX6              	64.91%		H3GD29              	56.35%
Q75BV0              	35.59%		H3GM66              	55.84%
                    	       		H3HB03              	55.58%
                    	       		H3H2C8              	38.32%
                    	       		H3GAP4              	35.28%
                    	       		H3GJX2              	35.03%
                    	       		H3G9N5              	34.01%
                    	       		H3GAP6              	32.99%
                    	       		H3H0I3              	32.99%
                    	       		H3GY59              	31.98%
Bootstrap support for Q75CX5 as seed ortholog is 100%.
Bootstrap support for H3H2D3 as seed ortholog is 73%.
Alternative seed ortholog is H3G9N9 (17 bits away from this cluster)
Bootstrap support for H3H590 as seed ortholog is 71%.
Alternative seed ortholog is H3G9N9 (17 bits away from this cluster)

Group of orthologs #1543. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:12 P.ramorum:75

Q750H1              	100.00%		H3H1L0              	100.00%
                    	       		H3H867              	71.18%
Bootstrap support for Q750H1 as seed ortholog is 59%.
Alternative seed ortholog is Q750R0 (12 bits away from this cluster)
Bootstrap support for H3H1L0 as seed ortholog is 100%.

Group of orthologs #1544. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:75

Q758V4              	100.00%		H3GZX3              	100.00%
Q75BZ4              	6.26%		
Bootstrap support for Q758V4 as seed ortholog is 100%.
Bootstrap support for H3GZX3 as seed ortholog is 100%.

Group of orthologs #1545. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:75

Q75B33              	100.00%		H3G7X7              	100.00%
Bootstrap support for Q75B33 as seed ortholog is 100%.
Bootstrap support for H3G7X7 as seed ortholog is 100%.

Group of orthologs #1546. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:75

Q75BD1              	100.00%		H3G990              	100.00%
Bootstrap support for Q75BD1 as seed ortholog is 100%.
Bootstrap support for H3G990 as seed ortholog is 100%.

Group of orthologs #1547. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:75

Q757A0              	100.00%		H3GW59              	100.00%
Bootstrap support for Q757A0 as seed ortholog is 100%.
Bootstrap support for H3GW59 as seed ortholog is 100%.

Group of orthologs #1548. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.ramorum:75

Q75DF4              	100.00%		H3GWN0              	100.00%
Bootstrap support for Q75DF4 as seed ortholog is 100%.
Bootstrap support for H3GWN0 as seed ortholog is 100%.

Group of orthologs #1549. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:74

Q758D4              	100.00%		H3GWP8              	100.00%
Q757J5              	28.94%		H3GDI1              	41.17%
Q757U4              	8.53%		H3HB30              	41.17%
                    	       		H3GDI0              	40.33%
                    	       		H3GDH9              	40.06%
                    	       		H3GDJ2              	39.59%
                    	       		H3GDJ3              	36.25%
                    	       		H3GDJ0              	32.90%
                    	       		H3GDI6              	28.16%
                    	       		H3GNE1              	24.81%
                    	       		H3HD30              	21.65%
                    	       		H3GK53              	18.87%
Bootstrap support for Q758D4 as seed ortholog is 100%.
Bootstrap support for H3GWP8 as seed ortholog is 100%.

Group of orthologs #1550. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:74

Q752V2              	100.00%		H3GJF7              	100.00%
                    	       		H3GJF6              	40.69%
                    	       		H3GDB1              	30.16%
                    	       		H3GJF5              	25.10%
Bootstrap support for Q752V2 as seed ortholog is 100%.
Bootstrap support for H3GJF7 as seed ortholog is 100%.

Group of orthologs #1551. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:22

Q759U0              	100.00%		H3GHB6              	100.00%
                    	       		H3G6G4              	16.74%
                    	       		H3H1I3              	9.50%
Bootstrap support for Q759U0 as seed ortholog is 100%.
Bootstrap support for H3GHB6 as seed ortholog is 81%.

Group of orthologs #1552. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:74

Q757E9              	100.00%		H3H105              	100.00%
                    	       		H3H368              	21.52%
Bootstrap support for Q757E9 as seed ortholog is 100%.
Bootstrap support for H3H105 as seed ortholog is 100%.

Group of orthologs #1553. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:74

Q75A91              	100.00%		H3GBK0              	100.00%
Bootstrap support for Q75A91 as seed ortholog is 100%.
Bootstrap support for H3GBK0 as seed ortholog is 100%.

Group of orthologs #1554. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:74

Q75D26              	100.00%		H3GCK4              	100.00%
Bootstrap support for Q75D26 as seed ortholog is 100%.
Bootstrap support for H3GCK4 as seed ortholog is 100%.

Group of orthologs #1555. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.ramorum:74

Q75E15              	100.00%		H3GTR1              	100.00%
Bootstrap support for Q75E15 as seed ortholog is 100%.
Bootstrap support for H3GTR1 as seed ortholog is 100%.

Group of orthologs #1556. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.ramorum:73

Q75AX7              	100.00%		H3GCK2              	100.00%
Bootstrap support for Q75AX7 as seed ortholog is 100%.
Bootstrap support for H3GCK2 as seed ortholog is 100%.

Group of orthologs #1557. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.ramorum:73

Q756I4              	100.00%		H3GMB9              	100.00%
Bootstrap support for Q756I4 as seed ortholog is 100%.
Bootstrap support for H3GMB9 as seed ortholog is 100%.

Group of orthologs #1558. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.ramorum:73

Q75D53              	100.00%		H3GS58              	100.00%
Bootstrap support for Q75D53 as seed ortholog is 100%.
Bootstrap support for H3GS58 as seed ortholog is 100%.

Group of orthologs #1559. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.ramorum:72

Q752R2              	100.00%		H3G549              	100.00%
Bootstrap support for Q752R2 as seed ortholog is 100%.
Bootstrap support for H3G549 as seed ortholog is 100%.

Group of orthologs #1560. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.ramorum:6

Q75AR2              	100.00%		H3GHE5              	100.00%
Bootstrap support for Q75AR2 as seed ortholog is 100%.
Bootstrap support for H3GHE5 as seed ortholog is 63%.
Alternative seed ortholog is H3GP68 (6 bits away from this cluster)

Group of orthologs #1561. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.ramorum:72

D8FGB7              	100.00%		H3HDX2              	100.00%
Bootstrap support for D8FGB7 as seed ortholog is 100%.
Bootstrap support for H3HDX2 as seed ortholog is 100%.

Group of orthologs #1562. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.ramorum:72

Q75DC1              	100.00%		H3H3Q9              	100.00%
Bootstrap support for Q75DC1 as seed ortholog is 100%.
Bootstrap support for H3H3Q9 as seed ortholog is 100%.

Group of orthologs #1563. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:71

Q753S6              	100.00%		H3GI65              	100.00%
Bootstrap support for Q753S6 as seed ortholog is 100%.
Bootstrap support for H3GI65 as seed ortholog is 100%.

Group of orthologs #1564. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:71

Q750F7              	100.00%		H3GNS3              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for H3GNS3 as seed ortholog is 100%.

Group of orthologs #1565. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:71

Q755D0              	100.00%		H3GS93              	100.00%
Bootstrap support for Q755D0 as seed ortholog is 100%.
Bootstrap support for H3GS93 as seed ortholog is 100%.

Group of orthologs #1566. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:71

Q75BU4              	100.00%		H3GVL2              	100.00%
Bootstrap support for Q75BU4 as seed ortholog is 100%.
Bootstrap support for H3GVL2 as seed ortholog is 100%.

Group of orthologs #1567. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:18 P.ramorum:71

Q759D2              	100.00%		H3H0P5              	100.00%
Bootstrap support for Q759D2 as seed ortholog is 87%.
Bootstrap support for H3H0P5 as seed ortholog is 100%.

Group of orthologs #1568. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.ramorum:71

Q75AB4              	100.00%		H3H1L9              	100.00%
Bootstrap support for Q75AB4 as seed ortholog is 100%.
Bootstrap support for H3H1L9 as seed ortholog is 100%.

Group of orthologs #1569. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:70

Q750G6              	100.00%		H3G6J0              	100.00%
Bootstrap support for Q750G6 as seed ortholog is 100%.
Bootstrap support for H3G6J0 as seed ortholog is 100%.

Group of orthologs #1570. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:29

Q755T6              	100.00%		H3G5N3              	100.00%
Bootstrap support for Q755T6 as seed ortholog is 100%.
Bootstrap support for H3G5N3 as seed ortholog is 91%.

Group of orthologs #1571. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:70

Q752L7              	100.00%		H3G8J4              	100.00%
Bootstrap support for Q752L7 as seed ortholog is 100%.
Bootstrap support for H3G8J4 as seed ortholog is 100%.

Group of orthologs #1572. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:70

Q757I7              	100.00%		H3GRM7              	100.00%
Bootstrap support for Q757I7 as seed ortholog is 100%.
Bootstrap support for H3GRM7 as seed ortholog is 100%.

Group of orthologs #1573. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:70

Q759P0              	100.00%		H3GS60              	100.00%
Bootstrap support for Q759P0 as seed ortholog is 100%.
Bootstrap support for H3GS60 as seed ortholog is 100%.

Group of orthologs #1574. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:70

Q75C77              	100.00%		H3GUX3              	100.00%
Bootstrap support for Q75C77 as seed ortholog is 100%.
Bootstrap support for H3GUX3 as seed ortholog is 100%.

Group of orthologs #1575. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.ramorum:70

Q75CQ0              	100.00%		H3H1L1              	100.00%
Bootstrap support for Q75CQ0 as seed ortholog is 100%.
Bootstrap support for H3H1L1 as seed ortholog is 100%.

Group of orthologs #1576. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.ramorum:2

Q74Z04              	100.00%		H3G9D3              	100.00%
                    	       		H3GDT6              	7.28%
Bootstrap support for Q74Z04 as seed ortholog is 100%.
Bootstrap support for H3G9D3 as seed ortholog is 50%.
Alternative seed ortholog is H3G9U2 (2 bits away from this cluster)

Group of orthologs #1577. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.ramorum:69

Q75AB3              	100.00%		H3GPK3              	100.00%
                    	       		H3GPK5              	44.05%
Bootstrap support for Q75AB3 as seed ortholog is 100%.
Bootstrap support for H3GPK3 as seed ortholog is 100%.

Group of orthologs #1578. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.ramorum:69

Q754J4              	100.00%		H3G7D6              	100.00%
Bootstrap support for Q754J4 as seed ortholog is 100%.
Bootstrap support for H3G7D6 as seed ortholog is 100%.

Group of orthologs #1579. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.ramorum:69

Q74ZE5              	100.00%		H3GG75              	100.00%
Bootstrap support for Q74ZE5 as seed ortholog is 100%.
Bootstrap support for H3GG75 as seed ortholog is 100%.

Group of orthologs #1580. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.ramorum:69

Q751X8              	100.00%		H3GID5              	100.00%
Bootstrap support for Q751X8 as seed ortholog is 100%.
Bootstrap support for H3GID5 as seed ortholog is 100%.

Group of orthologs #1581. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.ramorum:68

Q75EP7              	100.00%		H3GXR6              	100.00%
Q75ER3              	29.18%		
Bootstrap support for Q75EP7 as seed ortholog is 100%.
Bootstrap support for H3GXR6 as seed ortholog is 100%.

Group of orthologs #1582. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:14 P.ramorum:21

Q75DJ0              	100.00%		H3GH49              	100.00%
Bootstrap support for Q75DJ0 as seed ortholog is 72%.
Alternative seed ortholog is Q75AI7 (14 bits away from this cluster)
Bootstrap support for H3GH49 as seed ortholog is 70%.
Alternative seed ortholog is H3GNF4 (21 bits away from this cluster)

Group of orthologs #1583. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.ramorum:68

Q754N3              	100.00%		H3GYH4              	100.00%
Bootstrap support for Q754N3 as seed ortholog is 100%.
Bootstrap support for H3GYH4 as seed ortholog is 100%.

Group of orthologs #1584. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:67

Q759J9              	100.00%		H3GVJ2              	100.00%
                    	       		H3GVJ1              	86.72%
                    	       		H3GWC9              	52.78%
                    	       		H3GWC7              	52.03%
                    	       		H3GWD0              	32.33%
                    	       		H3GWC8              	31.37%
Bootstrap support for Q759J9 as seed ortholog is 100%.
Bootstrap support for H3GVJ2 as seed ortholog is 100%.

Group of orthologs #1585. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:67

Q75B38              	100.00%		H3G8N4              	100.00%
Bootstrap support for Q75B38 as seed ortholog is 100%.
Bootstrap support for H3G8N4 as seed ortholog is 100%.

Group of orthologs #1586. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:67

Q751F9              	100.00%		H3GGY1              	100.00%
Bootstrap support for Q751F9 as seed ortholog is 100%.
Bootstrap support for H3GGY1 as seed ortholog is 100%.

Group of orthologs #1587. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:67

Q752T0              	100.00%		H3GLB8              	100.00%
Bootstrap support for Q752T0 as seed ortholog is 100%.
Bootstrap support for H3GLB8 as seed ortholog is 100%.

Group of orthologs #1588. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:23

Q75BA0              	100.00%		H3GIW5              	100.00%
Bootstrap support for Q75BA0 as seed ortholog is 100%.
Bootstrap support for H3GIW5 as seed ortholog is 81%.

Group of orthologs #1589. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.ramorum:67

Q756U8              	100.00%		H3GVL0              	100.00%
Bootstrap support for Q756U8 as seed ortholog is 100%.
Bootstrap support for H3GVL0 as seed ortholog is 100%.

Group of orthologs #1590. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q75AA2              	100.00%		H3GRY0              	100.00%
                    	       		H3GRX9              	59.31%
Bootstrap support for Q75AA2 as seed ortholog is 100%.
Bootstrap support for H3GRY0 as seed ortholog is 100%.

Group of orthologs #1591. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q751R3              	100.00%		H3G7B0              	100.00%
Bootstrap support for Q751R3 as seed ortholog is 100%.
Bootstrap support for H3G7B0 as seed ortholog is 100%.

Group of orthologs #1592. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q752Y7              	100.00%		H3G8W9              	100.00%
Bootstrap support for Q752Y7 as seed ortholog is 100%.
Bootstrap support for H3G8W9 as seed ortholog is 100%.

Group of orthologs #1593. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q759W3              	100.00%		H3GBE3              	100.00%
Bootstrap support for Q759W3 as seed ortholog is 100%.
Bootstrap support for H3GBE3 as seed ortholog is 100%.

Group of orthologs #1594. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q753P6              	100.00%		H3GKA5              	100.00%
Bootstrap support for Q753P6 as seed ortholog is 100%.
Bootstrap support for H3GKA5 as seed ortholog is 100%.

Group of orthologs #1595. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q758A0              	100.00%		H3GHD5              	100.00%
Bootstrap support for Q758A0 as seed ortholog is 100%.
Bootstrap support for H3GHD5 as seed ortholog is 100%.

Group of orthologs #1596. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q75F05              	100.00%		H3GGZ9              	100.00%
Bootstrap support for Q75F05 as seed ortholog is 100%.
Bootstrap support for H3GGZ9 as seed ortholog is 100%.

Group of orthologs #1597. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q75A53              	100.00%		H3GNA2              	100.00%
Bootstrap support for Q75A53 as seed ortholog is 100%.
Bootstrap support for H3GNA2 as seed ortholog is 100%.

Group of orthologs #1598. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q75EX4              	100.00%		H3GL41              	100.00%
Bootstrap support for Q75EX4 as seed ortholog is 100%.
Bootstrap support for H3GL41 as seed ortholog is 100%.

Group of orthologs #1599. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q756Q0              	100.00%		H3H2I9              	100.00%
Bootstrap support for Q756Q0 as seed ortholog is 100%.
Bootstrap support for H3H2I9 as seed ortholog is 100%.

Group of orthologs #1600. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.ramorum:66

Q75CC7              	100.00%		H3GZ47              	100.00%
Bootstrap support for Q75CC7 as seed ortholog is 100%.
Bootstrap support for H3GZ47 as seed ortholog is 100%.

Group of orthologs #1601. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.ramorum:65

Q759N8              	100.00%		H3H3P1              	100.00%
Q755C3              	8.35%		
Bootstrap support for Q759N8 as seed ortholog is 100%.
Bootstrap support for H3H3P1 as seed ortholog is 100%.

Group of orthologs #1602. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.ramorum:65

Q75CF9              	100.00%		H3GL03              	100.00%
Bootstrap support for Q75CF9 as seed ortholog is 100%.
Bootstrap support for H3GL03 as seed ortholog is 100%.

Group of orthologs #1603. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.ramorum:65

Q74ZJ3              	100.00%		H3GWV8              	100.00%
Bootstrap support for Q74ZJ3 as seed ortholog is 100%.
Bootstrap support for H3GWV8 as seed ortholog is 100%.

Group of orthologs #1604. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.ramorum:65

Q75FB7              	100.00%		H3GXG3              	100.00%
Bootstrap support for Q75FB7 as seed ortholog is 100%.
Bootstrap support for H3GXG3 as seed ortholog is 100%.

Group of orthologs #1605. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q75CX7              	100.00%		H3GG78              	100.00%
Q755P8              	100.00%		H3GIC2              	100.00%
Q758U7              	46.75%		H3H043              	100.00%
Q75A98              	14.05%		H3H438              	60.00%
                    	       		H3H929              	58.38%
                    	       		H3H044              	57.81%
                    	       		H3GG77              	57.71%
                    	       		H3GDI8              	45.74%
                    	       		H3H440              	44.74%
                    	       		H3GDI7              	41.05%
                    	       		H3H8M2              	36.51%
                    	       		H3GG71              	36.15%
                    	       		H3GWY6              	35.51%
                    	       		H3H7H1              	31.68%
                    	       		H3GKA8              	9.38%
                    	       		H3GL30              	6.39%
Bootstrap support for Q75CX7 as seed ortholog is 100%.
Bootstrap support for Q755P8 as seed ortholog is 100%.
Bootstrap support for H3GG78 as seed ortholog is 100%.
Bootstrap support for H3GIC2 as seed ortholog is 100%.
Bootstrap support for H3H043 as seed ortholog is 100%.

Group of orthologs #1606. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q758X2              	100.00%		H3GHH0              	100.00%
                    	       		H3G8Q8              	58.48%
                    	       		H3G5Z7              	42.41%
Bootstrap support for Q758X2 as seed ortholog is 100%.
Bootstrap support for H3GHH0 as seed ortholog is 100%.

Group of orthologs #1607. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q752D5              	100.00%		H3GWU0              	100.00%
Q755R0              	95.40%		
Q75BF8              	95.40%		
Bootstrap support for Q752D5 as seed ortholog is 100%.
Bootstrap support for H3GWU0 as seed ortholog is 100%.

Group of orthologs #1608. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q754F4              	100.00%		H3H3X8              	100.00%
Q75CQ8              	5.12%		H3GS19              	68.12%
Bootstrap support for Q754F4 as seed ortholog is 100%.
Bootstrap support for H3H3X8 as seed ortholog is 100%.

Group of orthologs #1609. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q754A8              	100.00%		H3G6E9              	100.00%
                    	       		H3H0V1              	5.91%
Bootstrap support for Q754A8 as seed ortholog is 100%.
Bootstrap support for H3G6E9 as seed ortholog is 100%.

Group of orthologs #1610. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q758M9              	100.00%		H3G535              	100.00%
Bootstrap support for Q758M9 as seed ortholog is 100%.
Bootstrap support for H3G535 as seed ortholog is 100%.

Group of orthologs #1611. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q75F12              	100.00%		H3GG37              	100.00%
Bootstrap support for Q75F12 as seed ortholog is 100%.
Bootstrap support for H3GG37 as seed ortholog is 100%.

Group of orthologs #1612. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q75D81              	100.00%		H3GQV2              	100.00%
Bootstrap support for Q75D81 as seed ortholog is 100%.
Bootstrap support for H3GQV2 as seed ortholog is 100%.

Group of orthologs #1613. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q75EC5              	100.00%		H3GUZ8              	100.00%
Bootstrap support for Q75EC5 as seed ortholog is 100%.
Bootstrap support for H3GUZ8 as seed ortholog is 100%.

Group of orthologs #1614. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q75DI0              	100.00%		H3H1C3              	100.00%
Bootstrap support for Q75DI0 as seed ortholog is 100%.
Bootstrap support for H3H1C3 as seed ortholog is 100%.

Group of orthologs #1615. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.ramorum:64

Q75DF9              	100.00%		H3HB50              	100.00%
Bootstrap support for Q75DF9 as seed ortholog is 100%.
Bootstrap support for H3HB50 as seed ortholog is 100%.

Group of orthologs #1616. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.ramorum:63

Q74ZB6              	100.00%		H3GLR4              	100.00%
                    	       		H3HB29              	9.96%
Bootstrap support for Q74ZB6 as seed ortholog is 100%.
Bootstrap support for H3GLR4 as seed ortholog is 100%.

Group of orthologs #1617. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.ramorum:63

Q74ZR8              	100.00%		H3G705              	100.00%
Bootstrap support for Q74ZR8 as seed ortholog is 100%.
Bootstrap support for H3G705 as seed ortholog is 100%.

Group of orthologs #1618. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.ramorum:63

Q751G9              	100.00%		H3G6V0              	100.00%
Bootstrap support for Q751G9 as seed ortholog is 100%.
Bootstrap support for H3G6V0 as seed ortholog is 100%.

Group of orthologs #1619. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.ramorum:63

Q750Y3              	100.00%		H3G9A2              	100.00%
Bootstrap support for Q750Y3 as seed ortholog is 100%.
Bootstrap support for H3G9A2 as seed ortholog is 100%.

Group of orthologs #1620. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:10 P.ramorum:62

Q75E87              	100.00%		H3GMD8              	100.00%
                    	       		H3GBU4              	5.60%
Bootstrap support for Q75E87 as seed ortholog is 64%.
Alternative seed ortholog is Q758I7 (10 bits away from this cluster)
Bootstrap support for H3GMD8 as seed ortholog is 100%.

Group of orthologs #1621. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q754P6              	100.00%		H3G5L6              	100.00%
Bootstrap support for Q754P6 as seed ortholog is 100%.
Bootstrap support for H3G5L6 as seed ortholog is 100%.

Group of orthologs #1622. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q74ZL6              	100.00%		H3GAX8              	100.00%
Bootstrap support for Q74ZL6 as seed ortholog is 100%.
Bootstrap support for H3GAX8 as seed ortholog is 100%.

Group of orthologs #1623. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q75BR7              	100.00%		H3G919              	100.00%
Bootstrap support for Q75BR7 as seed ortholog is 100%.
Bootstrap support for H3G919 as seed ortholog is 100%.

Group of orthologs #1624. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q753I3              	100.00%		H3GI53              	100.00%
Bootstrap support for Q753I3 as seed ortholog is 100%.
Bootstrap support for H3GI53 as seed ortholog is 100%.

Group of orthologs #1625. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q752B9              	100.00%		H3GLV9              	100.00%
Bootstrap support for Q752B9 as seed ortholog is 100%.
Bootstrap support for H3GLV9 as seed ortholog is 100%.

Group of orthologs #1626. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q753E0              	100.00%		H3GWN3              	100.00%
Bootstrap support for Q753E0 as seed ortholog is 100%.
Bootstrap support for H3GWN3 as seed ortholog is 100%.

Group of orthologs #1627. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q75CH0              	100.00%		H3GPN6              	100.00%
Bootstrap support for Q75CH0 as seed ortholog is 100%.
Bootstrap support for H3GPN6 as seed ortholog is 100%.

Group of orthologs #1628. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.ramorum:62

Q755J1              	100.00%		H3HAR8              	100.00%
Bootstrap support for Q755J1 as seed ortholog is 100%.
Bootstrap support for H3HAR8 as seed ortholog is 100%.

Group of orthologs #1629. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:61

Q757W2              	100.00%		H3GK98              	100.00%
                    	       		H3GPF2              	6.36%
Bootstrap support for Q757W2 as seed ortholog is 100%.
Bootstrap support for H3GK98 as seed ortholog is 100%.

Group of orthologs #1630. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:61

Q75AY0              	100.00%		H3G7D7              	100.00%
Bootstrap support for Q75AY0 as seed ortholog is 100%.
Bootstrap support for H3G7D7 as seed ortholog is 100%.

Group of orthologs #1631. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:61

Q759A0              	100.00%		H3GGU1              	100.00%
Bootstrap support for Q759A0 as seed ortholog is 100%.
Bootstrap support for H3GGU1 as seed ortholog is 100%.

Group of orthologs #1632. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:61

Q75CT0              	100.00%		H3GE26              	100.00%
Bootstrap support for Q75CT0 as seed ortholog is 100%.
Bootstrap support for H3GE26 as seed ortholog is 100%.

Group of orthologs #1633. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:61

Q75F02              	100.00%		H3GFF4              	100.00%
Bootstrap support for Q75F02 as seed ortholog is 100%.
Bootstrap support for H3GFF4 as seed ortholog is 100%.

Group of orthologs #1634. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:11 P.ramorum:61

Q75F34              	100.00%		H3H103              	100.00%
Bootstrap support for Q75F34 as seed ortholog is 69%.
Alternative seed ortholog is Q756V7 (11 bits away from this cluster)
Bootstrap support for H3H103 as seed ortholog is 100%.

Group of orthologs #1635. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.ramorum:61

Q757K7              	100.00%		H3HBV9              	100.00%
Bootstrap support for Q757K7 as seed ortholog is 100%.
Bootstrap support for H3HBV9 as seed ortholog is 100%.

Group of orthologs #1636. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.ramorum:60

Q75CY0              	100.00%		H3GT54              	100.00%
Bootstrap support for Q75CY0 as seed ortholog is 100%.
Bootstrap support for H3GT54 as seed ortholog is 100%.

Group of orthologs #1637. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.ramorum:15

Q74ZB5              	100.00%		H3H418              	100.00%
Bootstrap support for Q74ZB5 as seed ortholog is 100%.
Bootstrap support for H3H418 as seed ortholog is 69%.
Alternative seed ortholog is H3GLQ5 (15 bits away from this cluster)

Group of orthologs #1638. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.ramorum:60

Q75AF9              	100.00%		H3H2J2              	100.00%
Bootstrap support for Q75AF9 as seed ortholog is 100%.
Bootstrap support for H3H2J2 as seed ortholog is 100%.

Group of orthologs #1639. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q753Q8              	100.00%		H3GKG7              	100.00%
                    	       		H3GFU4              	29.08%
Bootstrap support for Q753Q8 as seed ortholog is 100%.
Bootstrap support for H3GKG7 as seed ortholog is 100%.

Group of orthologs #1640. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q75B24              	100.00%		H3GH12              	100.00%
                    	       		H3GH13              	68.24%
Bootstrap support for Q75B24 as seed ortholog is 100%.
Bootstrap support for H3GH12 as seed ortholog is 100%.

Group of orthologs #1641. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q752S2              	100.00%		H3G589              	100.00%
Bootstrap support for Q752S2 as seed ortholog is 100%.
Bootstrap support for H3G589 as seed ortholog is 100%.

Group of orthologs #1642. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q75EI7              	100.00%		H3GES8              	100.00%
Bootstrap support for Q75EI7 as seed ortholog is 100%.
Bootstrap support for H3GES8 as seed ortholog is 100%.

Group of orthologs #1643. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q753S7              	100.00%		H3GTT9              	100.00%
Bootstrap support for Q753S7 as seed ortholog is 100%.
Bootstrap support for H3GTT9 as seed ortholog is 100%.

Group of orthologs #1644. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q756Z4              	100.00%		H3GTA1              	100.00%
Bootstrap support for Q756Z4 as seed ortholog is 100%.
Bootstrap support for H3GTA1 as seed ortholog is 100%.

Group of orthologs #1645. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.ramorum:59

Q751V8              	100.00%		H3HB15              	100.00%
Bootstrap support for Q751V8 as seed ortholog is 100%.
Bootstrap support for H3HB15 as seed ortholog is 100%.

Group of orthologs #1646. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.ramorum:58

Q75D22              	100.00%		H3GVS9              	100.00%
                    	       		H3HAN1              	6.16%
                    	       		H3HDX8              	5.14%
Bootstrap support for Q75D22 as seed ortholog is 100%.
Bootstrap support for H3GVS9 as seed ortholog is 100%.

Group of orthologs #1647. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.ramorum:58

Q759W7              	100.00%		H3GD79              	100.00%
Bootstrap support for Q759W7 as seed ortholog is 100%.
Bootstrap support for H3GD79 as seed ortholog is 100%.

Group of orthologs #1648. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.ramorum:58

Q75CP9              	100.00%		H3GZZ4              	100.00%
Bootstrap support for Q75CP9 as seed ortholog is 52%.
Alternative seed ortholog is Q75EV3 (1 bits away from this cluster)
Bootstrap support for H3GZZ4 as seed ortholog is 100%.

Group of orthologs #1649. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.ramorum:57

Q75D21              	100.00%		H3GE49              	100.00%
Bootstrap support for Q75D21 as seed ortholog is 100%.
Bootstrap support for H3GE49 as seed ortholog is 100%.

Group of orthologs #1650. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.ramorum:57

Q75AY2              	100.00%		H3GHF4              	100.00%
Bootstrap support for Q75AY2 as seed ortholog is 100%.
Bootstrap support for H3GHF4 as seed ortholog is 100%.

Group of orthologs #1651. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.ramorum:57

Q75D83              	100.00%		H3GWL6              	100.00%
Bootstrap support for Q75D83 as seed ortholog is 100%.
Bootstrap support for H3GWL6 as seed ortholog is 100%.

Group of orthologs #1652. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.ramorum:57

Q75F46              	100.00%		H3GV62              	100.00%
Bootstrap support for Q75F46 as seed ortholog is 100%.
Bootstrap support for H3GV62 as seed ortholog is 100%.

Group of orthologs #1653. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:56

Q75B84              	100.00%		H3GUJ7              	100.00%
                    	       		H3GUJ5              	55.07%
                    	       		H3GUK1              	36.96%
                    	       		H3H2T1              	21.01%
Bootstrap support for Q75B84 as seed ortholog is 100%.
Bootstrap support for H3GUJ7 as seed ortholog is 100%.

Group of orthologs #1654. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:56

Q755V5              	100.00%		H3H2G6              	100.00%
Bootstrap support for Q755V5 as seed ortholog is 100%.
Bootstrap support for H3H2G6 as seed ortholog is 100%.

Group of orthologs #1655. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:4

Q752D7              	100.00%		H3H5A6              	100.00%
Bootstrap support for Q752D7 as seed ortholog is 100%.
Bootstrap support for H3H5A6 as seed ortholog is 59%.
Alternative seed ortholog is H3G5W1 (4 bits away from this cluster)

Group of orthologs #1656. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:56

Q75C68              	100.00%		H3GXQ9              	100.00%
Bootstrap support for Q75C68 as seed ortholog is 100%.
Bootstrap support for H3GXQ9 as seed ortholog is 100%.

Group of orthologs #1657. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:56

Q75D44              	100.00%		H3GZZ3              	100.00%
Bootstrap support for Q75D44 as seed ortholog is 100%.
Bootstrap support for H3GZZ3 as seed ortholog is 100%.

Group of orthologs #1658. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.ramorum:56

Q75AZ2              	100.00%		H3HCK3              	100.00%
Bootstrap support for Q75AZ2 as seed ortholog is 100%.
Bootstrap support for H3HCK3 as seed ortholog is 100%.

Group of orthologs #1659. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.ramorum:55

Q751Y1              	100.00%		H3GRV6              	100.00%
                    	       		H3GRV7              	100.00%
                    	       		H3H6B6              	100.00%
Bootstrap support for Q751Y1 as seed ortholog is 100%.
Bootstrap support for H3GRV6 as seed ortholog is 100%.
Bootstrap support for H3GRV7 as seed ortholog is 100%.
Bootstrap support for H3H6B6 as seed ortholog is 100%.

Group of orthologs #1660. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.ramorum:55

Q750F0              	100.00%		H3GCJ8              	100.00%
Bootstrap support for Q750F0 as seed ortholog is 100%.
Bootstrap support for H3GCJ8 as seed ortholog is 100%.

Group of orthologs #1661. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.ramorum:55

Q752W4              	100.00%		H3GHR7              	100.00%
Bootstrap support for Q752W4 as seed ortholog is 100%.
Bootstrap support for H3GHR7 as seed ortholog is 100%.

Group of orthologs #1662. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.ramorum:55

Q75EA8              	100.00%		H3GC32              	100.00%
Bootstrap support for Q75EA8 as seed ortholog is 100%.
Bootstrap support for H3GC32 as seed ortholog is 100%.

Group of orthologs #1663. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.ramorum:55

Q75EL9              	100.00%		H3HBA1              	100.00%
Bootstrap support for Q75EL9 as seed ortholog is 100%.
Bootstrap support for H3HBA1 as seed ortholog is 100%.

Group of orthologs #1664. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q753S4              	100.00%		H3GTS6              	100.00%
                    	       		H3GPZ0              	68.24%
Bootstrap support for Q753S4 as seed ortholog is 100%.
Bootstrap support for H3GTS6 as seed ortholog is 100%.

Group of orthologs #1665. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q75BW1              	100.00%		H3G920              	100.00%
Bootstrap support for Q75BW1 as seed ortholog is 100%.
Bootstrap support for H3G920 as seed ortholog is 100%.

Group of orthologs #1666. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q753U8              	100.00%		H3GIW8              	100.00%
Bootstrap support for Q753U8 as seed ortholog is 100%.
Bootstrap support for H3GIW8 as seed ortholog is 100%.

Group of orthologs #1667. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q755W5              	100.00%		H3GJ66              	100.00%
Bootstrap support for Q755W5 as seed ortholog is 100%.
Bootstrap support for H3GJ66 as seed ortholog is 100%.

Group of orthologs #1668. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q75AG5              	100.00%		H3GLI2              	100.00%
Bootstrap support for Q75AG5 as seed ortholog is 100%.
Bootstrap support for H3GLI2 as seed ortholog is 100%.

Group of orthologs #1669. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q75E51              	100.00%		H3GJT1              	100.00%
Bootstrap support for Q75E51 as seed ortholog is 100%.
Bootstrap support for H3GJT1 as seed ortholog is 100%.

Group of orthologs #1670. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.ramorum:54

Q75CN8              	100.00%		H3GVL8              	100.00%
Bootstrap support for Q75CN8 as seed ortholog is 100%.
Bootstrap support for H3GVL8 as seed ortholog is 100%.

Group of orthologs #1671. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.ramorum:53

Q74ZT7              	100.00%		H3GIA1              	100.00%
                    	       		H3HBL1              	70.02%
Bootstrap support for Q74ZT7 as seed ortholog is 100%.
Bootstrap support for H3GIA1 as seed ortholog is 100%.

Group of orthologs #1672. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.ramorum:53

Q751I8              	100.00%		H3GM18              	100.00%
Bootstrap support for Q751I8 as seed ortholog is 100%.
Bootstrap support for H3GM18 as seed ortholog is 100%.

Group of orthologs #1673. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q75DH3              	100.00%		H3GRJ4              	100.00%
                    	       		H3GRJ9              	73.08%
                    	       		H3GRK0              	70.67%
                    	       		H3GGY5              	33.08%
                    	       		H3GGY6              	32.31%
                    	       		H3GBW0              	29.62%
                    	       		H3GKY4              	28.56%
                    	       		H3GMY9              	28.27%
Bootstrap support for Q75DH3 as seed ortholog is 100%.
Bootstrap support for H3GRJ4 as seed ortholog is 100%.

Group of orthologs #1674. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q753D3              	100.00%		H3GR37              	100.00%
                    	       		H3H736              	100.00%
Bootstrap support for Q753D3 as seed ortholog is 100%.
Bootstrap support for H3GR37 as seed ortholog is 100%.
Bootstrap support for H3H736 as seed ortholog is 100%.

Group of orthologs #1675. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q75AI6              	100.00%		H3GR50              	100.00%
                    	       		H3GHU4              	13.21%
Bootstrap support for Q75AI6 as seed ortholog is 100%.
Bootstrap support for H3GR50 as seed ortholog is 100%.

Group of orthologs #1676. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q75AP5              	100.00%		H3G5F7              	100.00%
Bootstrap support for Q75AP5 as seed ortholog is 100%.
Bootstrap support for H3G5F7 as seed ortholog is 100%.

Group of orthologs #1677. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q75DD8              	100.00%		B6V6G8              	100.00%
Bootstrap support for Q75DD8 as seed ortholog is 100%.
Bootstrap support for B6V6G8 as seed ortholog is 100%.

Group of orthologs #1678. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q753I0              	100.00%		H3GIC8              	100.00%
Bootstrap support for Q753I0 as seed ortholog is 100%.
Bootstrap support for H3GIC8 as seed ortholog is 100%.

Group of orthologs #1679. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.ramorum:52

Q75F79              	100.00%		H3GI56              	100.00%
Bootstrap support for Q75F79 as seed ortholog is 100%.
Bootstrap support for H3GI56 as seed ortholog is 100%.

Group of orthologs #1680. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:7

Q756U1              	100.00%		H3GS64              	100.00%
                    	       		H3H703              	8.02%
                    	       		H3GFL0              	6.33%
Bootstrap support for Q756U1 as seed ortholog is 100%.
Bootstrap support for H3GS64 as seed ortholog is 56%.
Alternative seed ortholog is H3GLQ5 (7 bits away from this cluster)

Group of orthologs #1681. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:51

Q74ZD4              	100.00%		H3GH30              	100.00%
Bootstrap support for Q74ZD4 as seed ortholog is 100%.
Bootstrap support for H3GH30 as seed ortholog is 100%.

Group of orthologs #1682. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:51

Q75AI8              	100.00%		H3GBG7              	100.00%
Bootstrap support for Q75AI8 as seed ortholog is 100%.
Bootstrap support for H3GBG7 as seed ortholog is 100%.

Group of orthologs #1683. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:51

Q752K2              	100.00%		H3GMY4              	100.00%
Bootstrap support for Q752K2 as seed ortholog is 100%.
Bootstrap support for H3GMY4 as seed ortholog is 100%.

Group of orthologs #1684. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:51

Q75AK0              	100.00%		H3GH71              	100.00%
Bootstrap support for Q75AK0 as seed ortholog is 100%.
Bootstrap support for H3GH71 as seed ortholog is 100%.

Group of orthologs #1685. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.ramorum:51

Q754C1              	100.00%		H3HEG7              	100.00%
Bootstrap support for Q754C1 as seed ortholog is 100%.
Bootstrap support for H3HEG7 as seed ortholog is 100%.

Group of orthologs #1686. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.ramorum:50

Q75DD3              	100.00%		H3GBA6              	100.00%
                    	       		H3GCX4              	98.52%
                    	       		H3G6L6              	93.03%
                    	       		H3G6L8              	75.82%
                    	       		H3G8A2              	72.11%
                    	       		H3GCW9              	71.51%
                    	       		H3G6L9              	70.47%
                    	       		H3G6S3              	70.03%
                    	       		H3GCX6              	66.77%
                    	       		H3GCW8              	64.84%
                    	       		H3G864              	64.39%
                    	       		H3GA92              	64.24%
                    	       		H3G9S3              	64.24%
                    	       		H3GA91              	62.76%
                    	       		H3GA93              	62.76%
                    	       		H3GYJ8              	62.31%
                    	       		H3G9N4              	59.64%
                    	       		H3G8Q2              	56.38%
                    	       		H3G6U7              	54.90%
                    	       		H3G8Q1              	53.86%
                    	       		H3GCX7              	51.19%
Bootstrap support for Q75DD3 as seed ortholog is 55%.
Alternative seed ortholog is Q75CM6 (1 bits away from this cluster)
Bootstrap support for H3GBA6 as seed ortholog is 100%.

Group of orthologs #1687. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:4

Q75AK9              	100.00%		H3HCM8              	100.00%
Q750H5              	6.38%		
Bootstrap support for Q75AK9 as seed ortholog is 100%.
Bootstrap support for H3HCM8 as seed ortholog is 57%.
Alternative seed ortholog is H3GIL5 (4 bits away from this cluster)

Group of orthologs #1688. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:50

Q754L3              	100.00%		H3G531              	100.00%
Bootstrap support for Q754L3 as seed ortholog is 100%.
Bootstrap support for H3G531 as seed ortholog is 100%.

Group of orthologs #1689. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:50

Q75CK7              	100.00%		H3GKQ4              	100.00%
Bootstrap support for Q75CK7 as seed ortholog is 100%.
Bootstrap support for H3GKQ4 as seed ortholog is 100%.

Group of orthologs #1690. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:50

Q758U1              	100.00%		H3H1H4              	100.00%
Bootstrap support for Q758U1 as seed ortholog is 100%.
Bootstrap support for H3H1H4 as seed ortholog is 100%.

Group of orthologs #1691. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.ramorum:50

Q75EW7              	100.00%		H3GYY3              	100.00%
Bootstrap support for Q75EW7 as seed ortholog is 100%.
Bootstrap support for H3GYY3 as seed ortholog is 100%.

Group of orthologs #1692. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.ramorum:49

Q75ED3              	100.00%		H3GDJ4              	100.00%
                    	       		H3GDJ1              	47.14%
                    	       		H3GDH7              	32.72%
                    	       		H3GDJ5              	31.75%
                    	       		H3GNE0              	24.80%
                    	       		H3HCC4              	21.81%
Bootstrap support for Q75ED3 as seed ortholog is 100%.
Bootstrap support for H3GDJ4 as seed ortholog is 100%.

Group of orthologs #1693. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.ramorum:49

Q757N6              	100.00%		H3GI68              	100.00%
Bootstrap support for Q757N6 as seed ortholog is 100%.
Bootstrap support for H3GI68 as seed ortholog is 100%.

Group of orthologs #1694. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.ramorum:1

Q8NJR2              	100.00%		H3GZH9              	100.00%
                    	       		H3GAB9              	52.38%
Bootstrap support for Q8NJR2 as seed ortholog is 100%.
Bootstrap support for H3GZH9 as seed ortholog is 50%.
Alternative seed ortholog is H3H341 (1 bits away from this cluster)

Group of orthologs #1695. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.ramorum:1

Q759Z2              	100.00%		H3H6B2              	100.00%
                    	       		H3HDG5              	6.88%
Bootstrap support for Q759Z2 as seed ortholog is 100%.
Bootstrap support for H3H6B2 as seed ortholog is 48%.
Alternative seed ortholog is H3GEI1 (1 bits away from this cluster)

Group of orthologs #1696. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.ramorum:48

Q751X1              	100.00%		H3H2K3              	100.00%
Bootstrap support for Q751X1 as seed ortholog is 100%.
Bootstrap support for H3H2K3 as seed ortholog is 100%.

Group of orthologs #1697. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.ramorum:48

Q75F04              	100.00%		H3H1H2              	100.00%
Bootstrap support for Q75F04 as seed ortholog is 100%.
Bootstrap support for H3H1H2 as seed ortholog is 100%.

Group of orthologs #1698. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.ramorum:48

Q757G7              	100.00%		H3HDP1              	100.00%
Bootstrap support for Q757G7 as seed ortholog is 100%.
Bootstrap support for H3HDP1 as seed ortholog is 100%.

Group of orthologs #1699. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.ramorum:48

Q75DW7              	100.00%		H3HAV3              	100.00%
Bootstrap support for Q75DW7 as seed ortholog is 100%.
Bootstrap support for H3HAV3 as seed ortholog is 100%.

Group of orthologs #1700. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:47

Q755F9              	100.00%		H3GJR1              	100.00%
                    	       		H3GJR2              	36.13%
                    	       		H3GJR4              	34.77%
                    	       		H3GJR3              	32.62%
                    	       		H3GJR5              	31.25%
                    	       		H3GJW4              	25.98%
                    	       		H3GJR0              	25.78%
                    	       		H3GY12              	24.02%
Bootstrap support for Q755F9 as seed ortholog is 100%.
Bootstrap support for H3GJR1 as seed ortholog is 100%.

Group of orthologs #1701. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:47

Q757F3              	100.00%		H3GM39              	100.00%
Bootstrap support for Q757F3 as seed ortholog is 100%.
Bootstrap support for H3GM39 as seed ortholog is 100%.

Group of orthologs #1702. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:47

Q75AT9              	100.00%		H3GZB6              	100.00%
Bootstrap support for Q75AT9 as seed ortholog is 100%.
Bootstrap support for H3GZB6 as seed ortholog is 100%.

Group of orthologs #1703. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:47

Q754Y7              	100.00%		H3H784              	100.00%
Bootstrap support for Q754Y7 as seed ortholog is 100%.
Bootstrap support for H3H784 as seed ortholog is 100%.

Group of orthologs #1704. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.ramorum:47

Q755J9              	100.00%		H3H7R0              	100.00%
Bootstrap support for Q755J9 as seed ortholog is 100%.
Bootstrap support for H3H7R0 as seed ortholog is 100%.

Group of orthologs #1705. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.ramorum:46

Q74ZH5              	100.00%		H3G587              	100.00%
Bootstrap support for Q74ZH5 as seed ortholog is 100%.
Bootstrap support for H3G587 as seed ortholog is 100%.

Group of orthologs #1706. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.ramorum:46

Q75EL2              	100.00%		H3GRN6              	100.00%
Bootstrap support for Q75EL2 as seed ortholog is 100%.
Bootstrap support for H3GRN6 as seed ortholog is 100%.

Group of orthologs #1707. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.ramorum:45

Q752V7              	100.00%		H3HDV5              	100.00%
                    	       		H3GZ68              	76.45%
                    	       		H3GZ73              	68.77%
                    	       		H3HC30              	62.29%
Bootstrap support for Q752V7 as seed ortholog is 100%.
Bootstrap support for H3HDV5 as seed ortholog is 100%.

Group of orthologs #1708. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.ramorum:45

Q757R5              	100.00%		H3GNU9              	100.00%
Bootstrap support for Q757R5 as seed ortholog is 100%.
Bootstrap support for H3GNU9 as seed ortholog is 100%.

Group of orthologs #1709. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.ramorum:44

Q754J1              	100.00%		H3H5H0              	100.00%
                    	       		H3GH35              	97.41%
Bootstrap support for Q754J1 as seed ortholog is 100%.
Bootstrap support for H3H5H0 as seed ortholog is 100%.

Group of orthologs #1710. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.ramorum:44

Q759B0              	100.00%		H3GJQ2              	100.00%
Bootstrap support for Q759B0 as seed ortholog is 100%.
Bootstrap support for H3GJQ2 as seed ortholog is 100%.

Group of orthologs #1711. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.ramorum:44

Q74Z66              	100.00%		H3H3B6              	100.00%
Bootstrap support for Q74Z66 as seed ortholog is 100%.
Bootstrap support for H3H3B6 as seed ortholog is 100%.

Group of orthologs #1712. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.ramorum:43

Q751J5              	100.00%		H3GHT1              	100.00%
Bootstrap support for Q751J5 as seed ortholog is 100%.
Bootstrap support for H3GHT1 as seed ortholog is 100%.

Group of orthologs #1713. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.ramorum:43

Q75B98              	100.00%		H3H117              	100.00%
Bootstrap support for Q75B98 as seed ortholog is 100%.
Bootstrap support for H3H117 as seed ortholog is 100%.

Group of orthologs #1714. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.ramorum:42

Q759J6              	100.00%		H3GMH5              	100.00%
Bootstrap support for Q759J6 as seed ortholog is 100%.
Bootstrap support for H3GMH5 as seed ortholog is 100%.

Group of orthologs #1715. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.ramorum:42

Q757H9              	100.00%		H3HCJ8              	100.00%
Bootstrap support for Q757H9 as seed ortholog is 100%.
Bootstrap support for H3HCJ8 as seed ortholog is 100%.

Group of orthologs #1716. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.ramorum:41

Q75B72              	100.00%		H3H2A8              	100.00%
                    	       		H3GG39              	29.56%
                    	       		H3GQ58              	20.89%
                    	       		H3GQ61              	19.99%
                    	       		H3GVK8              	11.88%
                    	       		H3H4J6              	9.01%
                    	       		H3GZR8              	8.46%
Bootstrap support for Q75B72 as seed ortholog is 100%.
Bootstrap support for H3H2A8 as seed ortholog is 100%.

Group of orthologs #1717. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.ramorum:41

Q75BG2              	100.00%		H3GSC3              	100.00%
Q751S2              	36.95%		
D8FGA9              	29.85%		
D8FGA6              	29.59%		
Bootstrap support for Q75BG2 as seed ortholog is 100%.
Bootstrap support for H3GSC3 as seed ortholog is 100%.