###################################
715 groups of orthologs
791 in-paralogs from A.gossypii
804 in-paralogs from P.chabaudi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1360 bits
Score difference with first non-orthologous sequence - A.gossypii:409 P.chabaudi:1360

Q75BK8              	100.00%		Q4Y4H6              	100.00%
Bootstrap support for Q75BK8 as seed ortholog is 100%.
Bootstrap support for Q4Y4H6 as seed ortholog is 100%.

Group of orthologs #2. Best score 756 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.chabaudi:362

Q75E97              	100.00%		Q4XZQ8              	100.00%
Bootstrap support for Q75E97 as seed ortholog is 99%.
Bootstrap support for Q4XZQ8 as seed ortholog is 100%.

Group of orthologs #3. Best score 722 bits
Score difference with first non-orthologous sequence - A.gossypii:580 P.chabaudi:722

Q75EP5              	100.00%		Q4XE94              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for Q4XE94 as seed ortholog is 100%.

Group of orthologs #4. Best score 716 bits
Score difference with first non-orthologous sequence - A.gossypii:716 P.chabaudi:716

Q74ZT5              	100.00%		Q4XUB3              	100.00%
Q75D82              	6.76%		
Bootstrap support for Q74ZT5 as seed ortholog is 100%.
Bootstrap support for Q4XUB3 as seed ortholog is 100%.

Group of orthologs #5. Best score 680 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:167

Q758I5              	100.00%		Q4XZ91              	100.00%
Bootstrap support for Q758I5 as seed ortholog is 89%.
Bootstrap support for Q4XZ91 as seed ortholog is 99%.

Group of orthologs #6. Best score 679 bits
Score difference with first non-orthologous sequence - A.gossypii:540 P.chabaudi:679

Q75BE4              	100.00%		Q4X2G0              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for Q4X2G0 as seed ortholog is 100%.

Group of orthologs #7. Best score 669 bits
Score difference with first non-orthologous sequence - A.gossypii:669 P.chabaudi:669

Q755K6              	100.00%		Q4XFG0              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for Q4XFG0 as seed ortholog is 100%.

Group of orthologs #8. Best score 640 bits
Score difference with first non-orthologous sequence - A.gossypii:640 P.chabaudi:640

Q753Q4              	100.00%		Q4Y5W4              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for Q4Y5W4 as seed ortholog is 100%.

Group of orthologs #9. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 P.chabaudi:601

Q759E3              	100.00%		Q4Y395              	100.00%
Bootstrap support for Q759E3 as seed ortholog is 100%.
Bootstrap support for Q4Y395 as seed ortholog is 100%.

Group of orthologs #10. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:598 P.chabaudi:598

Q759A4              	100.00%		Q4XY83              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 100%.
Bootstrap support for Q4XY83 as seed ortholog is 100%.

Group of orthologs #11. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:594 P.chabaudi:594

Q75BD2              	100.00%		Q4XQQ6              	100.00%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for Q4XQQ6 as seed ortholog is 100%.

Group of orthologs #12. Best score 589 bits
Score difference with first non-orthologous sequence - A.gossypii:589 P.chabaudi:589

Q758X0              	100.00%		Q4Y5M3              	100.00%
Q750T7              	21.54%		
Bootstrap support for Q758X0 as seed ortholog is 100%.
Bootstrap support for Q4Y5M3 as seed ortholog is 100%.

Group of orthologs #13. Best score 576 bits
Score difference with first non-orthologous sequence - A.gossypii:576 P.chabaudi:576

Q75F16              	100.00%		Q4XWB3              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for Q4XWB3 as seed ortholog is 100%.

Group of orthologs #14. Best score 576 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.chabaudi:161

Q75CZ5              	100.00%		Q4Y6S3              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 99%.
Bootstrap support for Q4Y6S3 as seed ortholog is 99%.

Group of orthologs #15. Best score 570 bits
Score difference with first non-orthologous sequence - A.gossypii:570 P.chabaudi:570

Q753N2              	100.00%		Q4XZ30              	100.00%
Bootstrap support for Q753N2 as seed ortholog is 100%.
Bootstrap support for Q4XZ30 as seed ortholog is 100%.

Group of orthologs #16. Best score 570 bits
Score difference with first non-orthologous sequence - A.gossypii:364 P.chabaudi:400

Q75BS4              	100.00%		Q4XU36              	100.00%
Bootstrap support for Q75BS4 as seed ortholog is 100%.
Bootstrap support for Q4XU36 as seed ortholog is 100%.

Group of orthologs #17. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.chabaudi:566

Q755Z2              	100.00%		Q4XPJ8              	100.00%
Q752L2              	25.05%		
Bootstrap support for Q755Z2 as seed ortholog is 99%.
Bootstrap support for Q4XPJ8 as seed ortholog is 100%.

Group of orthologs #18. Best score 564 bits
Score difference with first non-orthologous sequence - A.gossypii:564 P.chabaudi:564

Q755V8              	100.00%		Q4Y8Y8              	100.00%
Bootstrap support for Q755V8 as seed ortholog is 100%.
Bootstrap support for Q4Y8Y8 as seed ortholog is 100%.

Group of orthologs #19. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:368 P.chabaudi:551

Q755V3              	100.00%		Q4XT93              	100.00%
Bootstrap support for Q755V3 as seed ortholog is 100%.
Bootstrap support for Q4XT93 as seed ortholog is 100%.

Group of orthologs #20. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:547 P.chabaudi:547

Q75CF3              	100.00%		Q4XYQ6              	100.00%
Bootstrap support for Q75CF3 as seed ortholog is 100%.
Bootstrap support for Q4XYQ6 as seed ortholog is 100%.

Group of orthologs #21. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:350 P.chabaudi:497

Q754K5              	100.00%		Q4X2J7              	100.00%
Bootstrap support for Q754K5 as seed ortholog is 100%.
Bootstrap support for Q4X2J7 as seed ortholog is 100%.

Group of orthologs #22. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:269 P.chabaudi:537

Q756K0              	100.00%		Q4XLC3              	100.00%
Bootstrap support for Q756K0 as seed ortholog is 100%.
Bootstrap support for Q4XLC3 as seed ortholog is 100%.

Group of orthologs #23. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:537 P.chabaudi:537

Q757I5              	100.00%		Q4XM47              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for Q4XM47 as seed ortholog is 100%.

Group of orthologs #24. Best score 524 bits
Score difference with first non-orthologous sequence - A.gossypii:524 P.chabaudi:524

Q74ZS5              	100.00%		Q4Y279              	100.00%
Bootstrap support for Q74ZS5 as seed ortholog is 100%.
Bootstrap support for Q4Y279 as seed ortholog is 100%.

Group of orthologs #25. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 P.chabaudi:520

Q75DS7              	100.00%		Q4XXY9              	100.00%
Bootstrap support for Q75DS7 as seed ortholog is 100%.
Bootstrap support for Q4XXY9 as seed ortholog is 100%.

Group of orthologs #26. Best score 516 bits
Score difference with first non-orthologous sequence - A.gossypii:296 P.chabaudi:516

Q75D18              	100.00%		Q4Y0C3              	100.00%
Bootstrap support for Q75D18 as seed ortholog is 100%.
Bootstrap support for Q4Y0C3 as seed ortholog is 100%.

Group of orthologs #27. Best score 510 bits
Score difference with first non-orthologous sequence - A.gossypii:465 P.chabaudi:510

Q74ZS3              	100.00%		Q4X5R7              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for Q4X5R7 as seed ortholog is 100%.

Group of orthologs #28. Best score 510 bits
Score difference with first non-orthologous sequence - A.gossypii:510 P.chabaudi:510

Q756T4              	100.00%		Q4Y880              	100.00%
Bootstrap support for Q756T4 as seed ortholog is 100%.
Bootstrap support for Q4Y880 as seed ortholog is 100%.

Group of orthologs #29. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:287 P.chabaudi:234

Q752H7              	100.00%		Q4Y1T5              	100.00%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for Q4Y1T5 as seed ortholog is 100%.

Group of orthologs #30. Best score 501 bits
Score difference with first non-orthologous sequence - A.gossypii:501 P.chabaudi:501

Q759B4              	100.00%		Q4Y155              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for Q4Y155 as seed ortholog is 100%.

Group of orthologs #31. Best score 496 bits
Score difference with first non-orthologous sequence - A.gossypii:269 P.chabaudi:496

Q750C0              	100.00%		Q4XYB8              	100.00%
                    	       		Q4X6S6              	8.99%
Bootstrap support for Q750C0 as seed ortholog is 100%.
Bootstrap support for Q4XYB8 as seed ortholog is 100%.

Group of orthologs #32. Best score 495 bits
Score difference with first non-orthologous sequence - A.gossypii:307 P.chabaudi:495

Q74Z89              	100.00%		Q4Y5M9              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 100%.
Bootstrap support for Q4Y5M9 as seed ortholog is 100%.

Group of orthologs #33. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.chabaudi:493

Q74Z12              	100.00%		Q4X5F2              	100.00%
Bootstrap support for Q74Z12 as seed ortholog is 99%.
Bootstrap support for Q4X5F2 as seed ortholog is 100%.

Group of orthologs #34. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.chabaudi:493

Q75CF8              	100.00%		Q4XM14              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 99%.
Bootstrap support for Q4XM14 as seed ortholog is 100%.

Group of orthologs #35. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:280 P.chabaudi:493

Q753P8              	100.00%		Q4Y517              	100.00%
Bootstrap support for Q753P8 as seed ortholog is 100%.
Bootstrap support for Q4Y517 as seed ortholog is 100%.

Group of orthologs #36. Best score 492 bits
Score difference with first non-orthologous sequence - A.gossypii:438 P.chabaudi:222

Q754B5              	100.00%		Q4XRU6              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for Q4XRU6 as seed ortholog is 100%.

Group of orthologs #37. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.chabaudi:299

Q74Z73              	100.00%		Q4XWN4              	100.00%
Bootstrap support for Q74Z73 as seed ortholog is 100%.
Bootstrap support for Q4XWN4 as seed ortholog is 100%.

Group of orthologs #38. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:281 P.chabaudi:488

Q753A6              	100.00%		Q4XPC8              	100.00%
Bootstrap support for Q753A6 as seed ortholog is 100%.
Bootstrap support for Q4XPC8 as seed ortholog is 100%.

Group of orthologs #39. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:389 P.chabaudi:477

Q758M7              	100.00%		Q4XMG4              	100.00%
Bootstrap support for Q758M7 as seed ortholog is 100%.
Bootstrap support for Q4XMG4 as seed ortholog is 100%.

Group of orthologs #40. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 P.chabaudi:473

Q752Y8              	100.00%		Q4XWN8              	100.00%
Bootstrap support for Q752Y8 as seed ortholog is 100%.
Bootstrap support for Q4XWN8 as seed ortholog is 100%.

Group of orthologs #41. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.chabaudi:472

Q75C66              	100.00%		Q4XGH9              	100.00%
Bootstrap support for Q75C66 as seed ortholog is 100%.
Bootstrap support for Q4XGH9 as seed ortholog is 100%.

Group of orthologs #42. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 P.chabaudi:467

P62514              	100.00%		Q4XDQ5              	100.00%
Bootstrap support for P62514 as seed ortholog is 100%.
Bootstrap support for Q4XDQ5 as seed ortholog is 100%.

Group of orthologs #43. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:466 P.chabaudi:466

Q757Q0              	100.00%		Q4Y192              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for Q4Y192 as seed ortholog is 100%.

Group of orthologs #44. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:460 P.chabaudi:126

Q8J2M3              	100.00%		Q4Y4B0              	100.00%
Bootstrap support for Q8J2M3 as seed ortholog is 100%.
Bootstrap support for Q4Y4B0 as seed ortholog is 99%.

Group of orthologs #45. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 P.chabaudi:458

Q753K9              	100.00%		Q4Y1E6              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 100%.
Bootstrap support for Q4Y1E6 as seed ortholog is 100%.

Group of orthologs #46. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 P.chabaudi:458

Q753S1              	100.00%		Q4Y1Q4              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for Q4Y1Q4 as seed ortholog is 100%.

Group of orthologs #47. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 P.chabaudi:458

P41752              	100.00%		Q4Y7S9              	100.00%
Bootstrap support for P41752 as seed ortholog is 100%.
Bootstrap support for Q4Y7S9 as seed ortholog is 100%.

Group of orthologs #48. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.chabaudi:253

Q75AD4              	100.00%		Q4Y2D6              	100.00%
Bootstrap support for Q75AD4 as seed ortholog is 100%.
Bootstrap support for Q4Y2D6 as seed ortholog is 100%.

Group of orthologs #49. Best score 454 bits
Score difference with first non-orthologous sequence - A.gossypii:312 P.chabaudi:385

Q75ED8              	100.00%		Q4X567              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for Q4X567 as seed ortholog is 100%.

Group of orthologs #50. Best score 452 bits
Score difference with first non-orthologous sequence - A.gossypii:452 P.chabaudi:452

Q753T3              	100.00%		Q4XZZ5              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for Q4XZZ5 as seed ortholog is 100%.

Group of orthologs #51. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:142 P.chabaudi:451

Q757M5              	100.00%		Q4XZH5              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 100%.
Bootstrap support for Q4XZH5 as seed ortholog is 100%.

Group of orthologs #52. Best score 446 bits
Score difference with first non-orthologous sequence - A.gossypii:446 P.chabaudi:446

Q753M0              	100.00%		Q4XWY4              	100.00%
Bootstrap support for Q753M0 as seed ortholog is 100%.
Bootstrap support for Q4XWY4 as seed ortholog is 100%.

Group of orthologs #53. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.chabaudi:445

Q753Z4              	100.00%		Q4XUX8              	100.00%
Bootstrap support for Q753Z4 as seed ortholog is 99%.
Bootstrap support for Q4XUX8 as seed ortholog is 100%.

Group of orthologs #54. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.chabaudi:444

Q756Z5              	100.00%		Q4Y248              	100.00%
Bootstrap support for Q756Z5 as seed ortholog is 100%.
Bootstrap support for Q4Y248 as seed ortholog is 100%.

Group of orthologs #55. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.chabaudi:152

Q75B50              	100.00%		Q4Y3X7              	100.00%
Bootstrap support for Q75B50 as seed ortholog is 100%.
Bootstrap support for Q4Y3X7 as seed ortholog is 99%.

Group of orthologs #56. Best score 439 bits
Score difference with first non-orthologous sequence - A.gossypii:439 P.chabaudi:439

Q75C45              	100.00%		Q4Y209              	100.00%
Bootstrap support for Q75C45 as seed ortholog is 100%.
Bootstrap support for Q4Y209 as seed ortholog is 100%.

Group of orthologs #57. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.chabaudi:278

Q758Q0              	100.00%		Q4XWL2              	100.00%
Bootstrap support for Q758Q0 as seed ortholog is 99%.
Bootstrap support for Q4XWL2 as seed ortholog is 100%.

Group of orthologs #58. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 P.chabaudi:107

Q75F90              	100.00%		Q4XZ31              	100.00%
Q75DL8              	7.68%		
Bootstrap support for Q75F90 as seed ortholog is 100%.
Bootstrap support for Q4XZ31 as seed ortholog is 96%.

Group of orthologs #59. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:424 P.chabaudi:424

Q750J1              	100.00%		Q4XVS9              	100.00%
Bootstrap support for Q750J1 as seed ortholog is 100%.
Bootstrap support for Q4XVS9 as seed ortholog is 100%.

Group of orthologs #60. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:424 P.chabaudi:424

Q74ZT4              	100.00%		Q4XY88              	100.00%
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for Q4XY88 as seed ortholog is 100%.

Group of orthologs #61. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.chabaudi:424

Q75A36              	100.00%		Q4XVZ3              	100.00%
Bootstrap support for Q75A36 as seed ortholog is 100%.
Bootstrap support for Q4XVZ3 as seed ortholog is 100%.

Group of orthologs #62. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:420 P.chabaudi:420

Q751Y3              	100.00%		Q4X3C6              	100.00%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for Q4X3C6 as seed ortholog is 100%.

Group of orthologs #63. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:420 P.chabaudi:420

Q75C64              	100.00%		Q4XW93              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for Q4XW93 as seed ortholog is 100%.

Group of orthologs #64. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:19 P.chabaudi:104

Q75D00              	100.00%		Q4X3K2              	100.00%
Bootstrap support for Q75D00 as seed ortholog is 69%.
Alternative seed ortholog is Q754M1 (19 bits away from this cluster)
Bootstrap support for Q4X3K2 as seed ortholog is 99%.

Group of orthologs #65. Best score 416 bits
Score difference with first non-orthologous sequence - A.gossypii:351 P.chabaudi:354

Q75E20              	100.00%		Q4XQP7              	100.00%
Bootstrap support for Q75E20 as seed ortholog is 100%.
Bootstrap support for Q4XQP7 as seed ortholog is 100%.

Group of orthologs #66. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:414 P.chabaudi:414

Q751B3              	100.00%		Q4Y492              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for Q4Y492 as seed ortholog is 100%.

Group of orthologs #67. Best score 409 bits
Score difference with first non-orthologous sequence - A.gossypii:409 P.chabaudi:409

Q755C2              	100.00%		Q4XP95              	100.00%
Bootstrap support for Q755C2 as seed ortholog is 100%.
Bootstrap support for Q4XP95 as seed ortholog is 100%.

Group of orthologs #68. Best score 407 bits
Score difference with first non-orthologous sequence - A.gossypii:407 P.chabaudi:407

Q754E1              	100.00%		Q4Y174              	100.00%
Bootstrap support for Q754E1 as seed ortholog is 100%.
Bootstrap support for Q4Y174 as seed ortholog is 100%.

Group of orthologs #69. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:406 P.chabaudi:406

Q74ZK6              	100.00%		Q4Y1F8              	100.00%
                    	       		Q4Y7F2              	79.35%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for Q4Y1F8 as seed ortholog is 100%.

Group of orthologs #70. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:405 P.chabaudi:405

Q75CS4              	100.00%		Q4Y3G9              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for Q4Y3G9 as seed ortholog is 100%.

Group of orthologs #71. Best score 403 bits
Score difference with first non-orthologous sequence - A.gossypii:403 P.chabaudi:403

Q754M2              	100.00%		Q4XW62              	100.00%
                    	       		Q4XEU7              	43.30%
Bootstrap support for Q754M2 as seed ortholog is 100%.
Bootstrap support for Q4XW62 as seed ortholog is 100%.

Group of orthologs #72. Best score 397 bits
Score difference with first non-orthologous sequence - A.gossypii:397 P.chabaudi:397

O60028              	100.00%		Q4Y1I7              	100.00%
                    	       		Q4XEY5              	10.60%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for Q4Y1I7 as seed ortholog is 100%.

Group of orthologs #73. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:27 P.chabaudi:394

Q751I0              	100.00%		Q4XVQ3              	100.00%
Bootstrap support for Q751I0 as seed ortholog is 80%.
Bootstrap support for Q4XVQ3 as seed ortholog is 100%.

Group of orthologs #74. Best score 393 bits
Score difference with first non-orthologous sequence - A.gossypii:393 P.chabaudi:393

Q752D6              	100.00%		Q4Y1K2              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for Q4Y1K2 as seed ortholog is 100%.

Group of orthologs #75. Best score 392 bits
Score difference with first non-orthologous sequence - A.gossypii:392 P.chabaudi:326

Q74ZC0              	100.00%		Q4Y814              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for Q4Y814 as seed ortholog is 100%.

Group of orthologs #76. Best score 390 bits
Score difference with first non-orthologous sequence - A.gossypii:390 P.chabaudi:169

Q750R4              	100.00%		Q4Y1K1              	100.00%
Bootstrap support for Q750R4 as seed ortholog is 100%.
Bootstrap support for Q4Y1K1 as seed ortholog is 99%.

Group of orthologs #77. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.chabaudi:129

Q75BL8              	100.00%		Q4XRB1              	100.00%
Q755W0              	13.02%		
Bootstrap support for Q75BL8 as seed ortholog is 100%.
Bootstrap support for Q4XRB1 as seed ortholog is 100%.

Group of orthologs #78. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.chabaudi:389

Q753F9              	100.00%		Q4XYN5              	100.00%
Bootstrap support for Q753F9 as seed ortholog is 97%.
Bootstrap support for Q4XYN5 as seed ortholog is 100%.

Group of orthologs #79. Best score 387 bits
Score difference with first non-orthologous sequence - A.gossypii:33 P.chabaudi:68

Q756Q2              	100.00%		Q4XEG0              	100.00%
Bootstrap support for Q756Q2 as seed ortholog is 83%.
Bootstrap support for Q4XEG0 as seed ortholog is 98%.

Group of orthologs #80. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 P.chabaudi:306

Q75F64              	100.00%		Q4XQK1              	100.00%
Bootstrap support for Q75F64 as seed ortholog is 100%.
Bootstrap support for Q4XQK1 as seed ortholog is 100%.

Group of orthologs #81. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:378 P.chabaudi:378

Q75AP8              	100.00%		Q4Y881              	100.00%
Bootstrap support for Q75AP8 as seed ortholog is 100%.
Bootstrap support for Q4Y881 as seed ortholog is 100%.

Group of orthologs #82. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 P.chabaudi:377

Q752Q7              	100.00%		Q4XSW9              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 100%.
Bootstrap support for Q4XSW9 as seed ortholog is 100%.

Group of orthologs #83. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 P.chabaudi:96

Q754B2              	100.00%		Q4Y937              	100.00%
Bootstrap support for Q754B2 as seed ortholog is 100%.
Bootstrap support for Q4Y937 as seed ortholog is 99%.

Group of orthologs #84. Best score 376 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.chabaudi:215

Q759L6              	100.00%		Q4XVK7              	100.00%
Bootstrap support for Q759L6 as seed ortholog is 100%.
Bootstrap support for Q4XVK7 as seed ortholog is 100%.

Group of orthologs #85. Best score 372 bits
Score difference with first non-orthologous sequence - A.gossypii:372 P.chabaudi:291

Q75BQ6              	100.00%		Q4Y556              	100.00%
Q758F0              	34.15%		
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for Q4Y556 as seed ortholog is 100%.

Group of orthologs #86. Best score 370 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.chabaudi:370

Q74ZT2              	100.00%		Q4XYW5              	100.00%
Bootstrap support for Q74ZT2 as seed ortholog is 98%.
Bootstrap support for Q4XYW5 as seed ortholog is 100%.

Group of orthologs #87. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:365 P.chabaudi:365

Q758E3              	100.00%		Q4Y7X9              	100.00%
Q757E6              	11.24%		
Bootstrap support for Q758E3 as seed ortholog is 100%.
Bootstrap support for Q4Y7X9 as seed ortholog is 100%.

Group of orthologs #88. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:365 P.chabaudi:365

Q75D48              	100.00%		Q4X2E2              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for Q4X2E2 as seed ortholog is 100%.

Group of orthologs #89. Best score 363 bits
Score difference with first non-orthologous sequence - A.gossypii:363 P.chabaudi:220

Q759A9              	100.00%		Q4XYU6              	100.00%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for Q4XYU6 as seed ortholog is 100%.

Group of orthologs #90. Best score 363 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.chabaudi:182

Q75BP5              	100.00%		Q4Y3A0              	100.00%
Bootstrap support for Q75BP5 as seed ortholog is 99%.
Bootstrap support for Q4Y3A0 as seed ortholog is 100%.

Group of orthologs #91. Best score 363 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.chabaudi:363

Q75AF7              	100.00%		Q4Y5C0              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 100%.
Bootstrap support for Q4Y5C0 as seed ortholog is 100%.

Group of orthologs #92. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:362

Q757Y4              	100.00%		Q4Y6T8              	100.00%
Bootstrap support for Q757Y4 as seed ortholog is 89%.
Bootstrap support for Q4Y6T8 as seed ortholog is 100%.

Group of orthologs #93. Best score 361 bits
Score difference with first non-orthologous sequence - A.gossypii:361 P.chabaudi:361

Q75A42              	100.00%		Q4Y0Z2              	100.00%
Bootstrap support for Q75A42 as seed ortholog is 100%.
Bootstrap support for Q4Y0Z2 as seed ortholog is 100%.

Group of orthologs #94. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:360 P.chabaudi:360

Q75E56              	100.00%		Q4X2S8              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for Q4X2S8 as seed ortholog is 100%.

Group of orthologs #95. Best score 360 bits
Score difference with first non-orthologous sequence - A.gossypii:125 P.chabaudi:142

Q75EW9              	100.00%		Q4XYI1              	100.00%
Bootstrap support for Q75EW9 as seed ortholog is 99%.
Bootstrap support for Q4XYI1 as seed ortholog is 99%.

Group of orthologs #96. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.chabaudi:28

Q75A21              	100.00%		Q4Y1N6              	100.00%
Bootstrap support for Q75A21 as seed ortholog is 91%.
Bootstrap support for Q4Y1N6 as seed ortholog is 81%.

Group of orthologs #97. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 P.chabaudi:356

Q758F4              	100.00%		Q4XLB7              	100.00%
Q75DI5              	8.45%		
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for Q4XLB7 as seed ortholog is 100%.

Group of orthologs #98. Best score 355 bits
Score difference with first non-orthologous sequence - A.gossypii:240 P.chabaudi:355

Q75DW1              	100.00%		Q4XWY1              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 100%.
Bootstrap support for Q4XWY1 as seed ortholog is 100%.

Group of orthologs #99. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 P.chabaudi:354

Q753L7              	100.00%		Q4XT92              	100.00%
Bootstrap support for Q753L7 as seed ortholog is 100%.
Bootstrap support for Q4XT92 as seed ortholog is 100%.

Group of orthologs #100. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:212 P.chabaudi:353

Q75DA4              	100.00%		Q4Y0L7              	100.00%
Bootstrap support for Q75DA4 as seed ortholog is 100%.
Bootstrap support for Q4Y0L7 as seed ortholog is 100%.

Group of orthologs #101. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.chabaudi:170

Q75A43              	100.00%		Q4XZL6              	100.00%
                    	       		Q4X9G7              	27.11%
Bootstrap support for Q75A43 as seed ortholog is 93%.
Bootstrap support for Q4XZL6 as seed ortholog is 99%.

Group of orthologs #102. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.chabaudi:352

Q756Z1              	100.00%		Q4XWV5              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 99%.
Bootstrap support for Q4XWV5 as seed ortholog is 100%.

Group of orthologs #103. Best score 348 bits
Score difference with first non-orthologous sequence - A.gossypii:32 P.chabaudi:208

Q75A61              	100.00%		Q4Y4B1              	100.00%
Bootstrap support for Q75A61 as seed ortholog is 83%.
Bootstrap support for Q4Y4B1 as seed ortholog is 100%.

Group of orthologs #104. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:200 P.chabaudi:347

Q75C71              	100.00%		Q4XW78              	100.00%
Bootstrap support for Q75C71 as seed ortholog is 99%.
Bootstrap support for Q4XW78 as seed ortholog is 100%.

Group of orthologs #105. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:344 P.chabaudi:344

Q758Q9              	100.00%		Q4XWX7              	100.00%
                    	       		Q4Y080              	11.17%
Bootstrap support for Q758Q9 as seed ortholog is 100%.
Bootstrap support for Q4XWX7 as seed ortholog is 100%.

Group of orthologs #106. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:344 P.chabaudi:344

Q75E89              	100.00%		Q4XUM2              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for Q4XUM2 as seed ortholog is 100%.

Group of orthologs #107. Best score 340 bits
Score difference with first non-orthologous sequence - A.gossypii:290 P.chabaudi:340

Q75DZ9              	100.00%		Q4Y543              	100.00%
                    	       		Q4XF17              	35.83%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for Q4Y543 as seed ortholog is 100%.

Group of orthologs #108. Best score 339 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.chabaudi:339

Q758U9              	100.00%		Q4X5E3              	100.00%
Bootstrap support for Q758U9 as seed ortholog is 100%.
Bootstrap support for Q4X5E3 as seed ortholog is 100%.

Group of orthologs #109. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 P.chabaudi:336

Q751H8              	100.00%		Q4Y728              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for Q4Y728 as seed ortholog is 100%.

Group of orthologs #110. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.chabaudi:29

Q755N4              	100.00%		Q4XLL6              	100.00%
Bootstrap support for Q755N4 as seed ortholog is 86%.
Bootstrap support for Q4XLL6 as seed ortholog is 66%.
Alternative seed ortholog is Q4Y1J6 (29 bits away from this cluster)

Group of orthologs #111. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:201 P.chabaudi:334

Q755U7              	100.00%		Q4XWC3              	100.00%
Bootstrap support for Q755U7 as seed ortholog is 99%.
Bootstrap support for Q4XWC3 as seed ortholog is 100%.

Group of orthologs #112. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:266 P.chabaudi:333

Q758I6              	100.00%		Q4XY67              	100.00%
Bootstrap support for Q758I6 as seed ortholog is 100%.
Bootstrap support for Q4XY67 as seed ortholog is 100%.

Group of orthologs #113. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:331 P.chabaudi:331

Q759A5              	100.00%		Q4X751              	100.00%
Q75F62              	13.16%		
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for Q4X751 as seed ortholog is 100%.

Group of orthologs #114. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:329 P.chabaudi:329

Q74ZH1              	100.00%		Q4Y5L1              	100.00%
Bootstrap support for Q74ZH1 as seed ortholog is 100%.
Bootstrap support for Q4Y5L1 as seed ortholog is 100%.

Group of orthologs #115. Best score 328 bits
Score difference with first non-orthologous sequence - A.gossypii:239 P.chabaudi:234

Q750J4              	100.00%		Q4XZ78              	100.00%
Bootstrap support for Q750J4 as seed ortholog is 100%.
Bootstrap support for Q4XZ78 as seed ortholog is 100%.

Group of orthologs #116. Best score 327 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.chabaudi:327

Q751B1              	100.00%		Q4Y443              	100.00%
                    	       		Q4XHL7              	20.41%
Bootstrap support for Q751B1 as seed ortholog is 100%.
Bootstrap support for Q4Y443 as seed ortholog is 100%.

Group of orthologs #117. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.chabaudi:326

Q758Q4              	100.00%		Q4XEG1              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 84%.
Bootstrap support for Q4XEG1 as seed ortholog is 100%.

Group of orthologs #118. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:326 P.chabaudi:326

Q759Q4              	100.00%		Q4XXZ2              	100.00%
Bootstrap support for Q759Q4 as seed ortholog is 100%.
Bootstrap support for Q4XXZ2 as seed ortholog is 100%.

Group of orthologs #119. Best score 326 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:108

Q752X1              	100.00%		Q4Y8N2              	100.00%
Bootstrap support for Q752X1 as seed ortholog is 98%.
Bootstrap support for Q4Y8N2 as seed ortholog is 99%.

Group of orthologs #120. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 P.chabaudi:322

Q757D1              	100.00%		Q4X574              	100.00%
Bootstrap support for Q757D1 as seed ortholog is 100%.
Bootstrap support for Q4X574 as seed ortholog is 100%.

Group of orthologs #121. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.chabaudi:116

Q753X2              	100.00%		Q4Y3W8              	100.00%
Bootstrap support for Q753X2 as seed ortholog is 92%.
Bootstrap support for Q4Y3W8 as seed ortholog is 99%.

Group of orthologs #122. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 P.chabaudi:142

Q752R1              	100.00%		Q4Y4Z2              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for Q4Y4Z2 as seed ortholog is 99%.

Group of orthologs #123. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 P.chabaudi:319

Q755G5              	100.00%		Q4XTY0              	100.00%
Bootstrap support for Q755G5 as seed ortholog is 100%.
Bootstrap support for Q4XTY0 as seed ortholog is 100%.

Group of orthologs #124. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 P.chabaudi:319

Q752H0              	100.00%		Q4Y6J3              	100.00%
Bootstrap support for Q752H0 as seed ortholog is 100%.
Bootstrap support for Q4Y6J3 as seed ortholog is 100%.

Group of orthologs #125. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 P.chabaudi:319

Q755Y6              	100.00%		Q4Y991              	100.00%
Bootstrap support for Q755Y6 as seed ortholog is 100%.
Bootstrap support for Q4Y991 as seed ortholog is 100%.

Group of orthologs #126. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.chabaudi:160

Q755B5              	100.00%		Q4XMV3              	100.00%
Q758E1              	50.51%		
Bootstrap support for Q755B5 as seed ortholog is 100%.
Bootstrap support for Q4XMV3 as seed ortholog is 99%.

Group of orthologs #127. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.chabaudi:317

Q750Y5              	100.00%		Q4Y7N7              	100.00%
Bootstrap support for Q750Y5 as seed ortholog is 100%.
Bootstrap support for Q4Y7N7 as seed ortholog is 100%.

Group of orthologs #128. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 P.chabaudi:316

Q750Q5              	100.00%		Q4XUF3              	100.00%
Bootstrap support for Q750Q5 as seed ortholog is 100%.
Bootstrap support for Q4XUF3 as seed ortholog is 100%.

Group of orthologs #129. Best score 315 bits
Score difference with first non-orthologous sequence - A.gossypii:315 P.chabaudi:315

Q751T0              	100.00%		Q4XZC7              	100.00%
Bootstrap support for Q751T0 as seed ortholog is 100%.
Bootstrap support for Q4XZC7 as seed ortholog is 100%.

Group of orthologs #130. Best score 313 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.chabaudi:86

Q754U8              	100.00%		Q4X5U3              	100.00%
Bootstrap support for Q754U8 as seed ortholog is 99%.
Bootstrap support for Q4X5U3 as seed ortholog is 98%.

Group of orthologs #131. Best score 313 bits
Score difference with first non-orthologous sequence - A.gossypii:313 P.chabaudi:313

Q75F36              	100.00%		Q4Y6J7              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for Q4Y6J7 as seed ortholog is 100%.

Group of orthologs #132. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.chabaudi:212

Q74ZA9              	100.00%		Q4Y1U9              	100.00%
Bootstrap support for Q74ZA9 as seed ortholog is 100%.
Bootstrap support for Q4Y1U9 as seed ortholog is 100%.

Group of orthologs #133. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:176 P.chabaudi:193

Q751B0              	100.00%		Q4Y1F9              	100.00%
Bootstrap support for Q751B0 as seed ortholog is 99%.
Bootstrap support for Q4Y1F9 as seed ortholog is 100%.

Group of orthologs #134. Best score 306 bits
Score difference with first non-orthologous sequence - A.gossypii:306 P.chabaudi:306

Q75AE7              	100.00%		Q4XMG8              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for Q4XMG8 as seed ortholog is 100%.

Group of orthologs #135. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 P.chabaudi:305

Q756G9              	100.00%		Q4Y3V1              	100.00%
Bootstrap support for Q756G9 as seed ortholog is 100%.
Bootstrap support for Q4Y3V1 as seed ortholog is 100%.

Group of orthologs #136. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 P.chabaudi:302

Q75CI4              	100.00%		Q4XLQ4              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for Q4XLQ4 as seed ortholog is 100%.

Group of orthologs #137. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:300 P.chabaudi:300

Q75A16              	100.00%		Q4XX92              	100.00%
Bootstrap support for Q75A16 as seed ortholog is 100%.
Bootstrap support for Q4XX92 as seed ortholog is 100%.

Group of orthologs #138. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 P.chabaudi:299

Q75BG3              	100.00%		Q4XPR3              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for Q4XPR3 as seed ortholog is 100%.

Group of orthologs #139. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 P.chabaudi:299

Q75BS1              	100.00%		Q4XUL7              	100.00%
Bootstrap support for Q75BS1 as seed ortholog is 100%.
Bootstrap support for Q4XUL7 as seed ortholog is 100%.

Group of orthologs #140. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:297 P.chabaudi:297

Q75DS8              	100.00%		Q4XXP8              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for Q4XXP8 as seed ortholog is 100%.

Group of orthologs #141. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 P.chabaudi:296

Q75B52              	100.00%		Q4XLW3              	100.00%
Q75DS1              	5.12%		
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for Q4XLW3 as seed ortholog is 100%.

Group of orthologs #142. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 P.chabaudi:296

Q75DA2              	100.00%		Q4X4Y2              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for Q4X4Y2 as seed ortholog is 100%.

Group of orthologs #143. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 P.chabaudi:294

Q758L0              	100.00%		Q4X7J0              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for Q4X7J0 as seed ortholog is 100%.

Group of orthologs #144. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:293 P.chabaudi:110

Q758H3              	100.00%		Q4XW83              	100.00%
                    	       		Q4X294              	15.69%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for Q4XW83 as seed ortholog is 99%.

Group of orthologs #145. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.chabaudi:293

Q751N9              	100.00%		Q4XME4              	100.00%
Bootstrap support for Q751N9 as seed ortholog is 99%.
Bootstrap support for Q4XME4 as seed ortholog is 100%.

Group of orthologs #146. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 P.chabaudi:289

Q75B59              	100.00%		Q4XVI2              	100.00%
                    	       		Q4X9S6              	39.84%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for Q4XVI2 as seed ortholog is 100%.

Group of orthologs #147. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 P.chabaudi:289

Q75EK2              	100.00%		Q4XGH0              	100.00%
Bootstrap support for Q75EK2 as seed ortholog is 100%.
Bootstrap support for Q4XGH0 as seed ortholog is 100%.

Group of orthologs #148. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.chabaudi:289

Q756S0              	100.00%		Q4Y570              	100.00%
Bootstrap support for Q756S0 as seed ortholog is 100%.
Bootstrap support for Q4Y570 as seed ortholog is 100%.

Group of orthologs #149. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:215 P.chabaudi:288

Q75ED5              	100.00%		Q4Y3B8              	100.00%
Bootstrap support for Q75ED5 as seed ortholog is 100%.
Bootstrap support for Q4Y3B8 as seed ortholog is 100%.

Group of orthologs #150. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 P.chabaudi:287

Q750X3              	100.00%		Q4XLH2              	100.00%
Bootstrap support for Q750X3 as seed ortholog is 100%.
Bootstrap support for Q4XLH2 as seed ortholog is 100%.

Group of orthologs #151. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 P.chabaudi:287

Q75CF4              	100.00%		Q4XWA1              	100.00%
Bootstrap support for Q75CF4 as seed ortholog is 100%.
Bootstrap support for Q4XWA1 as seed ortholog is 100%.

Group of orthologs #152. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.chabaudi:286

Q75BQ2              	100.00%		Q4Y2L2              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for Q4Y2L2 as seed ortholog is 100%.

Group of orthologs #153. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.chabaudi:286

Q75AZ9              	100.00%		Q4Y626              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for Q4Y626 as seed ortholog is 100%.

Group of orthologs #154. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.chabaudi:286

Q75CY7              	100.00%		Q4Y7H8              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for Q4Y7H8 as seed ortholog is 100%.

Group of orthologs #155. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.chabaudi:284

Q750S7              	100.00%		Q4Y2P2              	100.00%
Bootstrap support for Q750S7 as seed ortholog is 99%.
Bootstrap support for Q4Y2P2 as seed ortholog is 100%.

Group of orthologs #156. Best score 284 bits
Score difference with first non-orthologous sequence - A.gossypii:30 P.chabaudi:284

Q753J9              	100.00%		Q4Y2P6              	100.00%
Bootstrap support for Q753J9 as seed ortholog is 86%.
Bootstrap support for Q4Y2P6 as seed ortholog is 100%.

Group of orthologs #157. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.chabaudi:4

Q757F2              	100.00%		Q4X8E0              	100.00%
Q75ET8              	54.35%		
Bootstrap support for Q757F2 as seed ortholog is 100%.
Bootstrap support for Q4X8E0 as seed ortholog is 56%.
Alternative seed ortholog is Q4Y7E4 (4 bits away from this cluster)

Group of orthologs #158. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 P.chabaudi:282

Q756H2              	100.00%		Q4Y535              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for Q4Y535 as seed ortholog is 100%.

Group of orthologs #159. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 P.chabaudi:280

Q75A67              	100.00%		Q4Y127              	100.00%
Bootstrap support for Q75A67 as seed ortholog is 100%.
Bootstrap support for Q4Y127 as seed ortholog is 100%.

Group of orthologs #160. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.chabaudi:279

Q757W9              	100.00%		Q4XZM4              	100.00%
Bootstrap support for Q757W9 as seed ortholog is 100%.
Bootstrap support for Q4XZM4 as seed ortholog is 100%.

Group of orthologs #161. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.chabaudi:277

Q755E1              	100.00%		Q4XRQ0              	100.00%
Bootstrap support for Q755E1 as seed ortholog is 100%.
Bootstrap support for Q4XRQ0 as seed ortholog is 100%.

Group of orthologs #162. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.chabaudi:276

Q757N3              	100.00%		Q4XTM9              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for Q4XTM9 as seed ortholog is 100%.

Group of orthologs #163. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.chabaudi:276

Q753A2              	100.00%		Q4Y718              	100.00%
Bootstrap support for Q753A2 as seed ortholog is 100%.
Bootstrap support for Q4Y718 as seed ortholog is 100%.

Group of orthologs #164. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.chabaudi:276

Q757P3              	100.00%		Q4Y4Z5              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for Q4Y4Z5 as seed ortholog is 100%.

Group of orthologs #165. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.chabaudi:273

Q75E11              	100.00%		Q4XE90              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for Q4XE90 as seed ortholog is 100%.

Group of orthologs #166. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.chabaudi:273

Q75BA7              	100.00%		Q4Y4S9              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for Q4Y4S9 as seed ortholog is 100%.

Group of orthologs #167. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.chabaudi:272

Q74ZU1              	100.00%		Q4XL93              	100.00%
Bootstrap support for Q74ZU1 as seed ortholog is 100%.
Bootstrap support for Q4XL93 as seed ortholog is 100%.

Group of orthologs #168. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.chabaudi:272

Q74ZF8              	100.00%		Q4XMT5              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for Q4XMT5 as seed ortholog is 100%.

Group of orthologs #169. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 P.chabaudi:272

Q75B31              	100.00%		Q4XLN7              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for Q4XLN7 as seed ortholog is 100%.

Group of orthologs #170. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.chabaudi:125

Q75F95              	100.00%		Q4XSI9              	100.00%
Bootstrap support for Q75F95 as seed ortholog is 95%.
Bootstrap support for Q4XSI9 as seed ortholog is 99%.

Group of orthologs #171. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.chabaudi:125

Q756B9              	100.00%		Q4XKZ8              	100.00%
Bootstrap support for Q756B9 as seed ortholog is 100%.
Bootstrap support for Q4XKZ8 as seed ortholog is 99%.

Group of orthologs #172. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.chabaudi:267

Q753H8              	100.00%		Q4XPF6              	100.00%
Bootstrap support for Q753H8 as seed ortholog is 100%.
Bootstrap support for Q4XPF6 as seed ortholog is 100%.

Group of orthologs #173. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 P.chabaudi:267

Q74ZD5              	100.00%		Q4XZY3              	100.00%
Bootstrap support for Q74ZD5 as seed ortholog is 100%.
Bootstrap support for Q4XZY3 as seed ortholog is 100%.

Group of orthologs #174. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.chabaudi:266

Q75BY2              	100.00%		Q4X6C9              	100.00%
                    	       		Q4XXB4              	99.56%
Bootstrap support for Q75BY2 as seed ortholog is 99%.
Bootstrap support for Q4X6C9 as seed ortholog is 100%.

Group of orthologs #175. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 P.chabaudi:266

Q757H0              	100.00%		Q4XLF8              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for Q4XLF8 as seed ortholog is 100%.

Group of orthologs #176. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:37 P.chabaudi:264

Q754S8              	100.00%		Q4Y754              	100.00%
                    	       		Q4XIX2              	30.66%
Bootstrap support for Q754S8 as seed ortholog is 83%.
Bootstrap support for Q4Y754 as seed ortholog is 100%.

Group of orthologs #177. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 P.chabaudi:264

Q759G5              	100.00%		Q4XUH9              	100.00%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for Q4XUH9 as seed ortholog is 100%.

Group of orthologs #178. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:192 P.chabaudi:172

Q753X3              	100.00%		Q4Y0J3              	100.00%
Bootstrap support for Q753X3 as seed ortholog is 100%.
Bootstrap support for Q4Y0J3 as seed ortholog is 100%.

Group of orthologs #179. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:261

Q75C60              	100.00%		Q4XX37              	100.00%
Bootstrap support for Q75C60 as seed ortholog is 99%.
Bootstrap support for Q4XX37 as seed ortholog is 100%.

Group of orthologs #180. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.chabaudi:128

Q75A66              	100.00%		Q4Y8M5              	100.00%
Bootstrap support for Q75A66 as seed ortholog is 82%.
Bootstrap support for Q4Y8M5 as seed ortholog is 99%.

Group of orthologs #181. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.chabaudi:210

Q75F99              	100.00%		Q4X7Q7              	100.00%
Bootstrap support for Q75F99 as seed ortholog is 100%.
Bootstrap support for Q4X7Q7 as seed ortholog is 100%.

Group of orthologs #182. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.chabaudi:162

Q750I3              	100.00%		Q4Y164              	100.00%
Bootstrap support for Q750I3 as seed ortholog is 100%.
Bootstrap support for Q4Y164 as seed ortholog is 99%.

Group of orthologs #183. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:257 P.chabaudi:257

Q75CV3              	100.00%		Q4XQ91              	100.00%
Bootstrap support for Q75CV3 as seed ortholog is 100%.
Bootstrap support for Q4XQ91 as seed ortholog is 100%.

Group of orthologs #184. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 P.chabaudi:23

Q74ZK4              	100.00%		Q4XV18              	100.00%
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for Q4XV18 as seed ortholog is 64%.
Alternative seed ortholog is Q4XXM4 (23 bits away from this cluster)

Group of orthologs #185. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:254 P.chabaudi:254

Q75DY5              	100.00%		Q4XXX5              	100.00%
Bootstrap support for Q75DY5 as seed ortholog is 100%.
Bootstrap support for Q4XXX5 as seed ortholog is 100%.

Group of orthologs #186. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.chabaudi:253

Q751S5              	100.00%		Q4XXD2              	100.00%
Bootstrap support for Q751S5 as seed ortholog is 100%.
Bootstrap support for Q4XXD2 as seed ortholog is 100%.

Group of orthologs #187. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.chabaudi:137

Q757U8              	100.00%		Q4XZ45              	100.00%
Bootstrap support for Q757U8 as seed ortholog is 95%.
Bootstrap support for Q4XZ45 as seed ortholog is 96%.

Group of orthologs #188. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.chabaudi:253

Q75EU2              	100.00%		Q4Y6P6              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for Q4Y6P6 as seed ortholog is 100%.

Group of orthologs #189. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.chabaudi:132

Q756T0              	100.00%		Q4Y6R0              	100.00%
Bootstrap support for Q756T0 as seed ortholog is 100%.
Bootstrap support for Q4Y6R0 as seed ortholog is 100%.

Group of orthologs #190. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.chabaudi:251

Q758F8              	100.00%		Q4XQ45              	100.00%
                    	       		Q4X8G9              	40.20%
Bootstrap support for Q758F8 as seed ortholog is 100%.
Bootstrap support for Q4XQ45 as seed ortholog is 100%.

Group of orthologs #191. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.chabaudi:251

Q758D0              	100.00%		Q4Y862              	100.00%
                    	       		Q4XHI1              	60.92%
Bootstrap support for Q758D0 as seed ortholog is 100%.
Bootstrap support for Q4Y862 as seed ortholog is 100%.

Group of orthologs #192. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.chabaudi:114

Q8J1G7              	100.00%		Q4XWE0              	100.00%
Bootstrap support for Q8J1G7 as seed ortholog is 98%.
Bootstrap support for Q4XWE0 as seed ortholog is 99%.

Group of orthologs #193. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 P.chabaudi:250

Q75D52              	100.00%		Q4Y3X5              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for Q4Y3X5 as seed ortholog is 100%.

Group of orthologs #194. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.chabaudi:246

Q754E7              	100.00%		Q4X4K9              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for Q4X4K9 as seed ortholog is 100%.

Group of orthologs #195. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.chabaudi:246

Q75C13              	100.00%		Q4Y162              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for Q4Y162 as seed ortholog is 100%.

Group of orthologs #196. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.chabaudi:245

P62513              	100.00%		Q4XDQ4              	100.00%
Bootstrap support for P62513 as seed ortholog is 100%.
Bootstrap support for Q4XDQ4 as seed ortholog is 100%.

Group of orthologs #197. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.chabaudi:245

Q750R2              	100.00%		Q4XMU5              	100.00%
Bootstrap support for Q750R2 as seed ortholog is 99%.
Bootstrap support for Q4XMU5 as seed ortholog is 100%.

Group of orthologs #198. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.chabaudi:245

Q75CI8              	100.00%		Q4XXD5              	100.00%
Bootstrap support for Q75CI8 as seed ortholog is 100%.
Bootstrap support for Q4XXD5 as seed ortholog is 100%.

Group of orthologs #199. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 P.chabaudi:244

Q750H0              	100.00%		Q4XU74              	100.00%
Bootstrap support for Q750H0 as seed ortholog is 100%.
Bootstrap support for Q4XU74 as seed ortholog is 100%.

Group of orthologs #200. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.chabaudi:243

Q758S7              	100.00%		Q4X290              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for Q4X290 as seed ortholog is 100%.

Group of orthologs #201. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.chabaudi:182

Q756H0              	100.00%		Q4XQH7              	100.00%
Bootstrap support for Q756H0 as seed ortholog is 99%.
Bootstrap support for Q4XQH7 as seed ortholog is 100%.

Group of orthologs #202. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 P.chabaudi:239

Q756G8              	100.00%		Q4XPN8              	100.00%
Bootstrap support for Q756G8 as seed ortholog is 100%.
Bootstrap support for Q4XPN8 as seed ortholog is 100%.

Group of orthologs #203. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 P.chabaudi:239

Q757P6              	100.00%		Q4XZ46              	100.00%
Bootstrap support for Q757P6 as seed ortholog is 100%.
Bootstrap support for Q4XZ46 as seed ortholog is 100%.

Group of orthologs #204. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 P.chabaudi:112

Q754X6              	100.00%		Q4XXL5              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 100%.
Bootstrap support for Q4XXL5 as seed ortholog is 99%.

Group of orthologs #205. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 P.chabaudi:238

Q75CQ9              	100.00%		Q4XZN2              	100.00%
Bootstrap support for Q75CQ9 as seed ortholog is 100%.
Bootstrap support for Q4XZN2 as seed ortholog is 100%.

Group of orthologs #206. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.chabaudi:235

Q754I8              	100.00%		Q4XDW8              	100.00%
Bootstrap support for Q754I8 as seed ortholog is 100%.
Bootstrap support for Q4XDW8 as seed ortholog is 100%.

Group of orthologs #207. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.chabaudi:235

Q751F3              	100.00%		Q4XYW9              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 30%.
Alternative seed ortholog is Q755X4 (46 bits away from this cluster)
Bootstrap support for Q4XYW9 as seed ortholog is 100%.

Group of orthologs #208. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 P.chabaudi:235

Q755D9              	100.00%		Q4Y1Z7              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for Q4Y1Z7 as seed ortholog is 100%.

Group of orthologs #209. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 P.chabaudi:234

Q759R5              	100.00%		Q4Y903              	100.00%
Bootstrap support for Q759R5 as seed ortholog is 100%.
Bootstrap support for Q4Y903 as seed ortholog is 100%.

Group of orthologs #210. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 P.chabaudi:234

Q75E77              	100.00%		Q4Y7G2              	100.00%
Bootstrap support for Q75E77 as seed ortholog is 100%.
Bootstrap support for Q4Y7G2 as seed ortholog is 100%.

Group of orthologs #211. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 P.chabaudi:233

Q759R0              	100.00%		Q4Y5T8              	100.00%
Bootstrap support for Q759R0 as seed ortholog is 100%.
Bootstrap support for Q4Y5T8 as seed ortholog is 100%.

Group of orthologs #212. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 P.chabaudi:231

Q758X9              	100.00%		Q4XLD5              	100.00%
Bootstrap support for Q758X9 as seed ortholog is 100%.
Bootstrap support for Q4XLD5 as seed ortholog is 100%.

Group of orthologs #213. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 P.chabaudi:231

Q75A91              	100.00%		Q4XM73              	100.00%
Bootstrap support for Q75A91 as seed ortholog is 100%.
Bootstrap support for Q4XM73 as seed ortholog is 100%.

Group of orthologs #214. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 P.chabaudi:231

Q758U0              	100.00%		Q4Y7S8              	100.00%
Bootstrap support for Q758U0 as seed ortholog is 100%.
Bootstrap support for Q4Y7S8 as seed ortholog is 100%.

Group of orthologs #215. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.chabaudi:68

Q75B34              	100.00%		Q4Y965              	100.00%
Q755U1              	6.00%		
Bootstrap support for Q75B34 as seed ortholog is 85%.
Bootstrap support for Q4Y965 as seed ortholog is 93%.

Group of orthologs #216. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.chabaudi:72

Q754J2              	100.00%		Q4X506              	100.00%
Bootstrap support for Q754J2 as seed ortholog is 96%.
Bootstrap support for Q4X506 as seed ortholog is 93%.

Group of orthologs #217. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.chabaudi:230

Q759J2              	100.00%		Q4XST6              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for Q4XST6 as seed ortholog is 100%.

Group of orthologs #218. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.chabaudi:150

Q75BY3              	100.00%		Q4XXT5              	100.00%
Bootstrap support for Q75BY3 as seed ortholog is 99%.
Bootstrap support for Q4XXT5 as seed ortholog is 100%.

Group of orthologs #219. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 P.chabaudi:229

Q75C90              	100.00%		Q4XVZ7              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for Q4XVZ7 as seed ortholog is 100%.

Group of orthologs #220. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.chabaudi:91

Q75CL7              	100.00%		Q4XW95              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for Q4XW95 as seed ortholog is 96%.

Group of orthologs #221. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.chabaudi:226

Q754D7              	100.00%		Q4Y208              	100.00%
Bootstrap support for Q754D7 as seed ortholog is 100%.
Bootstrap support for Q4Y208 as seed ortholog is 100%.

Group of orthologs #222. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 P.chabaudi:99

Q75F61              	100.00%		Q4XZR3              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 100%.
Bootstrap support for Q4XZR3 as seed ortholog is 98%.

Group of orthologs #223. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.chabaudi:225

Q751I9              	100.00%		Q4Y2L7              	100.00%
                    	       		Q4X916              	58.08%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for Q4Y2L7 as seed ortholog is 100%.

Group of orthologs #224. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.chabaudi:225

Q74Z48              	100.00%		Q4Y225              	100.00%
Bootstrap support for Q74Z48 as seed ortholog is 100%.
Bootstrap support for Q4Y225 as seed ortholog is 100%.

Group of orthologs #225. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:7 P.chabaudi:225

Q8J1G4              	100.00%		Q4XST8              	100.00%
Bootstrap support for Q8J1G4 as seed ortholog is 52%.
Alternative seed ortholog is Q759X8 (7 bits away from this cluster)
Bootstrap support for Q4XST8 as seed ortholog is 100%.

Group of orthologs #226. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.chabaudi:10

Q75AE1              	100.00%		Q4XYT8              	100.00%
Bootstrap support for Q75AE1 as seed ortholog is 97%.
Bootstrap support for Q4XYT8 as seed ortholog is 56%.
Alternative seed ortholog is Q4Y1J6 (10 bits away from this cluster)

Group of orthologs #227. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.chabaudi:225

Q75EH1              	100.00%		Q4XWF4              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for Q4XWF4 as seed ortholog is 100%.

Group of orthologs #228. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 P.chabaudi:224

Q75CR3              	100.00%		Q4XYL4              	100.00%
Q753I4              	19.52%		
Bootstrap support for Q75CR3 as seed ortholog is 100%.
Bootstrap support for Q4XYL4 as seed ortholog is 100%.

Group of orthologs #229. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.chabaudi:51

Q75BB2              	100.00%		Q4XRU7              	100.00%
Bootstrap support for Q75BB2 as seed ortholog is 97%.
Bootstrap support for Q4XRU7 as seed ortholog is 96%.

Group of orthologs #230. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 P.chabaudi:224

Q75DT8              	100.00%		Q4XVN2              	100.00%
Bootstrap support for Q75DT8 as seed ortholog is 100%.
Bootstrap support for Q4XVN2 as seed ortholog is 100%.

Group of orthologs #231. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.chabaudi:223

Q756X2              	100.00%		Q4XW80              	100.00%
                    	       		Q4XF75              	59.30%
Bootstrap support for Q756X2 as seed ortholog is 100%.
Bootstrap support for Q4XW80 as seed ortholog is 100%.

Group of orthologs #232. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.chabaudi:223

Q756Z9              	100.00%		Q4XZT7              	100.00%
Bootstrap support for Q756Z9 as seed ortholog is 100%.
Bootstrap support for Q4XZT7 as seed ortholog is 100%.

Group of orthologs #233. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.chabaudi:222

Q755D7              	100.00%		Q4XXZ4              	100.00%
Bootstrap support for Q755D7 as seed ortholog is 100%.
Bootstrap support for Q4XXZ4 as seed ortholog is 100%.

Group of orthologs #234. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:164

Q75BC1              	100.00%		Q4Y2T8              	100.00%
                    	       		Q4XCJ8              	20.48%
Bootstrap support for Q75BC1 as seed ortholog is 97%.
Bootstrap support for Q4Y2T8 as seed ortholog is 100%.

Group of orthologs #235. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:221

Q754V9              	100.00%		Q4Y7S4              	100.00%
Bootstrap support for Q754V9 as seed ortholog is 99%.
Bootstrap support for Q4Y7S4 as seed ortholog is 100%.

Group of orthologs #236. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.chabaudi:89

Q75CV7              	100.00%		Q4XR25              	100.00%
Q754Q3              	31.80%		
Q75B85              	5.56%		
Bootstrap support for Q75CV7 as seed ortholog is 97%.
Bootstrap support for Q4XR25 as seed ortholog is 99%.

Group of orthologs #237. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:220

Q757R6              	100.00%		Q4XTV5              	100.00%
                    	       		Q4XRI6              	6.95%
Bootstrap support for Q757R6 as seed ortholog is 95%.
Bootstrap support for Q4XTV5 as seed ortholog is 100%.

Group of orthologs #238. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.chabaudi:220

Q755D6              	100.00%		Q4XVH7              	100.00%
Bootstrap support for Q755D6 as seed ortholog is 99%.
Bootstrap support for Q4XVH7 as seed ortholog is 100%.

Group of orthologs #239. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.chabaudi:220

Q758F5              	100.00%		Q4XYI6              	100.00%
Bootstrap support for Q758F5 as seed ortholog is 100%.
Bootstrap support for Q4XYI6 as seed ortholog is 100%.

Group of orthologs #240. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.chabaudi:217

Q75C48              	100.00%		Q4X4M9              	100.00%
                    	       		Q4X8E4              	62.95%
Bootstrap support for Q75C48 as seed ortholog is 99%.
Bootstrap support for Q4X4M9 as seed ortholog is 100%.

Group of orthologs #241. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 P.chabaudi:217

Q757C6              	100.00%		Q4XY01              	100.00%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for Q4XY01 as seed ortholog is 100%.

Group of orthologs #242. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 P.chabaudi:217

Q75F07              	100.00%		Q4Y1Q7              	100.00%
Bootstrap support for Q75F07 as seed ortholog is 100%.
Bootstrap support for Q4Y1Q7 as seed ortholog is 100%.

Group of orthologs #243. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.chabaudi:127

Q750A9              	100.00%		Q4X2H2              	100.00%
Q756M2              	15.90%		
Bootstrap support for Q750A9 as seed ortholog is 86%.
Bootstrap support for Q4X2H2 as seed ortholog is 99%.

Group of orthologs #244. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.chabaudi:216

Q75ET1              	100.00%		Q4XYQ1              	100.00%
Bootstrap support for Q75ET1 as seed ortholog is 100%.
Bootstrap support for Q4XYQ1 as seed ortholog is 100%.

Group of orthologs #245. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:18 P.chabaudi:84

Q74ZI1              	100.00%		Q4XSU7              	100.00%
Bootstrap support for Q74ZI1 as seed ortholog is 80%.
Bootstrap support for Q4XSU7 as seed ortholog is 99%.

Group of orthologs #246. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.chabaudi:215

Q758L6              	100.00%		Q4XSS4              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 100%.
Bootstrap support for Q4XSS4 as seed ortholog is 100%.

Group of orthologs #247. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 P.chabaudi:214

Q750G3              	100.00%		Q4Y133              	100.00%
Bootstrap support for Q750G3 as seed ortholog is 100%.
Bootstrap support for Q4Y133 as seed ortholog is 100%.

Group of orthologs #248. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 P.chabaudi:213

Q753V8              	100.00%		Q4Y068              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for Q4Y068 as seed ortholog is 100%.

Group of orthologs #249. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 P.chabaudi:212

Q751P4              	100.00%		Q4XW16              	100.00%
Bootstrap support for Q751P4 as seed ortholog is 100%.
Bootstrap support for Q4XW16 as seed ortholog is 100%.

Group of orthologs #250. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 P.chabaudi:212

Q75EL3              	100.00%		Q4XLX9              	100.00%
Bootstrap support for Q75EL3 as seed ortholog is 100%.
Bootstrap support for Q4XLX9 as seed ortholog is 100%.

Group of orthologs #251. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 P.chabaudi:211

Q755A7              	100.00%		Q4XWF3              	100.00%
Bootstrap support for Q755A7 as seed ortholog is 100%.
Bootstrap support for Q4XWF3 as seed ortholog is 100%.

Group of orthologs #252. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.chabaudi:32

Q755T4              	100.00%		Q4X653              	100.00%
Bootstrap support for Q755T4 as seed ortholog is 99%.
Bootstrap support for Q4X653 as seed ortholog is 89%.

Group of orthologs #253. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:209

Q754D2              	100.00%		Q4Y5I2              	100.00%
Bootstrap support for Q754D2 as seed ortholog is 97%.
Bootstrap support for Q4Y5I2 as seed ortholog is 100%.

Group of orthologs #254. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.chabaudi:208

Q74Z31              	100.00%		Q4Y3Q4              	100.00%
Bootstrap support for Q74Z31 as seed ortholog is 100%.
Bootstrap support for Q4Y3Q4 as seed ortholog is 100%.

Group of orthologs #255. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 P.chabaudi:208

Q754R0              	100.00%		Q4Y1W0              	100.00%
Bootstrap support for Q754R0 as seed ortholog is 100%.
Bootstrap support for Q4Y1W0 as seed ortholog is 100%.

Group of orthologs #256. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.chabaudi:136

Q755T8              	100.00%		Q4Y4R8              	100.00%
Bootstrap support for Q755T8 as seed ortholog is 99%.
Bootstrap support for Q4Y4R8 as seed ortholog is 100%.

Group of orthologs #257. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 P.chabaudi:207

Q756R4              	100.00%		Q4X5E7              	100.00%
                    	       		Q4X9Z9              	63.70%
Bootstrap support for Q756R4 as seed ortholog is 100%.
Bootstrap support for Q4X5E7 as seed ortholog is 100%.

Group of orthologs #258. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 P.chabaudi:207

Q75ES5              	100.00%		Q4X909              	100.00%
Q750F3              	23.83%		
Bootstrap support for Q75ES5 as seed ortholog is 100%.
Bootstrap support for Q4X909 as seed ortholog is 100%.

Group of orthologs #259. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 P.chabaudi:207

Q752X6              	100.00%		Q4XR67              	100.00%
Q759L4              	25.30%		
Bootstrap support for Q752X6 as seed ortholog is 100%.
Bootstrap support for Q4XR67 as seed ortholog is 100%.

Group of orthologs #260. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:7 P.chabaudi:32

Q75D02              	100.00%		Q4Y237              	100.00%
                    	       		Q4XEQ5              	53.24%
Bootstrap support for Q75D02 as seed ortholog is 59%.
Alternative seed ortholog is Q750L3 (7 bits away from this cluster)
Bootstrap support for Q4Y237 as seed ortholog is 91%.

Group of orthologs #261. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:162 P.chabaudi:205

Q756F0              	100.00%		Q4XNE9              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 100%.
Bootstrap support for Q4XNE9 as seed ortholog is 100%.

Group of orthologs #262. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 P.chabaudi:203

Q75CU7              	100.00%		Q4XQN0              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for Q4XQN0 as seed ortholog is 100%.

Group of orthologs #263. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:202 P.chabaudi:123

Q750Y8              	100.00%		Q4XU30              	100.00%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for Q4XU30 as seed ortholog is 100%.

Group of orthologs #264. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.chabaudi:202

Q750H4              	100.00%		Q4XY30              	100.00%
Bootstrap support for Q750H4 as seed ortholog is 100%.
Bootstrap support for Q4XY30 as seed ortholog is 100%.

Group of orthologs #265. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.chabaudi:200

Q75C31              	100.00%		Q4XWC7              	100.00%
Q750J2              	9.14%		
Bootstrap support for Q75C31 as seed ortholog is 98%.
Bootstrap support for Q4XWC7 as seed ortholog is 100%.

Group of orthologs #266. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.chabaudi:109

Q75ET2              	100.00%		Q4Y099              	100.00%
                    	       		Q4Y3J5              	17.05%
Bootstrap support for Q75ET2 as seed ortholog is 95%.
Bootstrap support for Q4Y099 as seed ortholog is 99%.

Group of orthologs #267. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 P.chabaudi:200

Q75C63              	100.00%		Q4Y052              	100.00%
Bootstrap support for Q75C63 as seed ortholog is 100%.
Bootstrap support for Q4Y052 as seed ortholog is 100%.

Group of orthologs #268. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:28 P.chabaudi:28

Q75ES0              	100.00%		Q4XV45              	100.00%
                    	       		Q4XW47              	16.01%
Bootstrap support for Q75ES0 as seed ortholog is 78%.
Bootstrap support for Q4XV45 as seed ortholog is 90%.

Group of orthologs #269. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.chabaudi:198

Q75D05              	100.00%		Q4Y4B4              	100.00%
                    	       		Q4XF21              	28.44%
Bootstrap support for Q75D05 as seed ortholog is 100%.
Bootstrap support for Q4Y4B4 as seed ortholog is 100%.

Group of orthologs #270. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.chabaudi:70

Q74ZE2              	100.00%		Q4Y160              	100.00%
Bootstrap support for Q74ZE2 as seed ortholog is 99%.
Bootstrap support for Q4Y160 as seed ortholog is 99%.

Group of orthologs #271. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.chabaudi:195

Q75BD8              	100.00%		Q4X6J0              	100.00%
Bootstrap support for Q75BD8 as seed ortholog is 100%.
Bootstrap support for Q4X6J0 as seed ortholog is 100%.

Group of orthologs #272. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.chabaudi:195

Q755M2              	100.00%		Q4XFJ9              	100.00%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for Q4XFJ9 as seed ortholog is 100%.

Group of orthologs #273. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.chabaudi:195

Q75CE1              	100.00%		Q4XUL6              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for Q4XUL6 as seed ortholog is 100%.

Group of orthologs #274. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.chabaudi:195

Q75DD1              	100.00%		Q4Y2R2              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for Q4Y2R2 as seed ortholog is 100%.

Group of orthologs #275. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:17

Q75EB8              	100.00%		Q4XMR4              	100.00%
Bootstrap support for Q75EB8 as seed ortholog is 99%.
Bootstrap support for Q4XMR4 as seed ortholog is 75%.

Group of orthologs #276. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 P.chabaudi:194

Q756S5              	100.00%		Q4Y410              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for Q4Y410 as seed ortholog is 100%.

Group of orthologs #277. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 P.chabaudi:194

Q758H5              	100.00%		Q4Y666              	100.00%
Bootstrap support for Q758H5 as seed ortholog is 100%.
Bootstrap support for Q4Y666 as seed ortholog is 100%.

Group of orthologs #278. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.chabaudi:50

Q75BX7              	100.00%		Q4Y227              	100.00%
Q75BX8              	11.11%		
Q74Z00              	9.37%		
Bootstrap support for Q75BX7 as seed ortholog is 99%.
Bootstrap support for Q4Y227 as seed ortholog is 88%.

Group of orthologs #279. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.chabaudi:193

Q75AM2              	100.00%		Q4Y575              	100.00%
Bootstrap support for Q75AM2 as seed ortholog is 100%.
Bootstrap support for Q4Y575 as seed ortholog is 100%.

Group of orthologs #280. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 P.chabaudi:192

Q757V3              	100.00%		Q4Y8N6              	100.00%
Bootstrap support for Q757V3 as seed ortholog is 100%.
Bootstrap support for Q4Y8N6 as seed ortholog is 100%.

Group of orthologs #281. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 P.chabaudi:191

Q752J5              	100.00%		Q4XD44              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for Q4XD44 as seed ortholog is 100%.

Group of orthologs #282. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:65

Q74ZC1              	100.00%		Q4XX91              	100.00%
Bootstrap support for Q74ZC1 as seed ortholog is 97%.
Bootstrap support for Q4XX91 as seed ortholog is 77%.

Group of orthologs #283. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.chabaudi:191

Q758S8              	100.00%		Q4XYE6              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 100%.
Bootstrap support for Q4XYE6 as seed ortholog is 100%.

Group of orthologs #284. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.chabaudi:190

Q75C94              	100.00%		Q4XYD2              	100.00%
Q751Z2              	25.88%		Q4XS11              	60.24%
                    	       		Q4XGA5              	59.59%
Bootstrap support for Q75C94 as seed ortholog is 100%.
Bootstrap support for Q4XYD2 as seed ortholog is 100%.

Group of orthologs #285. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.chabaudi:4

Q750W6              	100.00%		Q4XWM9              	100.00%
Q756U6              	38.51%		
Bootstrap support for Q750W6 as seed ortholog is 48%.
Alternative seed ortholog is Q75EY4 (1 bits away from this cluster)
Bootstrap support for Q4XWM9 as seed ortholog is 56%.
Alternative seed ortholog is Q4XX78 (4 bits away from this cluster)

Group of orthologs #286. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.chabaudi:190

Q75CG9              	100.00%		Q4XDA3              	100.00%
Bootstrap support for Q75CG9 as seed ortholog is 100%.
Bootstrap support for Q4XDA3 as seed ortholog is 100%.

Group of orthologs #287. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.chabaudi:190

Q759D9              	100.00%		Q4Y1Z2              	100.00%
Bootstrap support for Q759D9 as seed ortholog is 100%.
Bootstrap support for Q4Y1Z2 as seed ortholog is 100%.

Group of orthologs #288. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.chabaudi:190

Q75DW4              	100.00%		Q4Y5T5              	100.00%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for Q4Y5T5 as seed ortholog is 100%.

Group of orthologs #289. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 P.chabaudi:189

Q756A0              	100.00%		Q4XX95              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for Q4XX95 as seed ortholog is 100%.

Group of orthologs #290. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 P.chabaudi:189

Q758R9              	100.00%		Q4XYS3              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for Q4XYS3 as seed ortholog is 100%.

Group of orthologs #291. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.chabaudi:100

Q75BA4              	100.00%		Q4XXN0              	100.00%
Bootstrap support for Q75BA4 as seed ortholog is 100%.
Bootstrap support for Q4XXN0 as seed ortholog is 99%.

Group of orthologs #292. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 P.chabaudi:53

Q756I6              	100.00%		Q4XVL1              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for Q4XVL1 as seed ortholog is 99%.

Group of orthologs #293. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.chabaudi:187

Q752T4              	100.00%		Q4X4N3              	100.00%
Q74ZA2              	16.19%		
Bootstrap support for Q752T4 as seed ortholog is 100%.
Bootstrap support for Q4X4N3 as seed ortholog is 100%.

Group of orthologs #294. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.chabaudi:187

Q757W4              	100.00%		Q4XLH3              	100.00%
Bootstrap support for Q757W4 as seed ortholog is 100%.
Bootstrap support for Q4XLH3 as seed ortholog is 100%.

Group of orthologs #295. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.chabaudi:75

Q75CA9              	100.00%		Q4Y8B5              	100.00%
Bootstrap support for Q75CA9 as seed ortholog is 99%.
Bootstrap support for Q4Y8B5 as seed ortholog is 99%.

Group of orthologs #296. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.chabaudi:15

Q74Z87              	100.00%		Q4XPF2              	100.00%
Q750H3              	8.41%		
Bootstrap support for Q74Z87 as seed ortholog is 100%.
Bootstrap support for Q4XPF2 as seed ortholog is 63%.
Alternative seed ortholog is Q4X2I4 (15 bits away from this cluster)

Group of orthologs #297. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.chabaudi:83

Q74ZL1              	100.00%		Q4Y613              	100.00%
Bootstrap support for Q74ZL1 as seed ortholog is 99%.
Bootstrap support for Q4Y613 as seed ortholog is 99%.

Group of orthologs #298. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.chabaudi:184

Q75EG2              	100.00%		Q4XA45              	100.00%
Bootstrap support for Q75EG2 as seed ortholog is 100%.
Bootstrap support for Q4XA45 as seed ortholog is 100%.

Group of orthologs #299. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 P.chabaudi:184

Q75EN8              	100.00%		Q4XN56              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for Q4XN56 as seed ortholog is 100%.

Group of orthologs #300. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 P.chabaudi:184

Q75DA5              	100.00%		Q4Y1I1              	100.00%
Bootstrap support for Q75DA5 as seed ortholog is 100%.
Bootstrap support for Q4Y1I1 as seed ortholog is 100%.

Group of orthologs #301. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.chabaudi:183

Q75BY1              	100.00%		Q4Y088              	100.00%
Bootstrap support for Q75BY1 as seed ortholog is 90%.
Bootstrap support for Q4Y088 as seed ortholog is 100%.

Group of orthologs #302. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 P.chabaudi:183

Q75AP7              	100.00%		Q4Y4J0              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 100%.
Bootstrap support for Q4Y4J0 as seed ortholog is 100%.

Group of orthologs #303. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.chabaudi:182

Q756N5              	100.00%		Q4XZX2              	100.00%
Bootstrap support for Q756N5 as seed ortholog is 100%.
Bootstrap support for Q4XZX2 as seed ortholog is 100%.

Group of orthologs #304. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.chabaudi:181

Q750Z7              	100.00%		Q4Y4V5              	100.00%
Bootstrap support for Q750Z7 as seed ortholog is 100%.
Bootstrap support for Q4Y4V5 as seed ortholog is 100%.

Group of orthologs #305. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 P.chabaudi:181

Q75EB0              	100.00%		Q4XY04              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for Q4XY04 as seed ortholog is 100%.

Group of orthologs #306. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:180

Q751N3              	100.00%		Q4Y142              	100.00%
Bootstrap support for Q751N3 as seed ortholog is 99%.
Bootstrap support for Q4Y142 as seed ortholog is 100%.

Group of orthologs #307. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 P.chabaudi:180

Q75EE7              	100.00%		Q4Y4I9              	100.00%
Bootstrap support for Q75EE7 as seed ortholog is 100%.
Bootstrap support for Q4Y4I9 as seed ortholog is 100%.

Group of orthologs #308. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 P.chabaudi:179

Q75CK1              	100.00%		Q4XYX2              	100.00%
Bootstrap support for Q75CK1 as seed ortholog is 100%.
Bootstrap support for Q4XYX2 as seed ortholog is 100%.

Group of orthologs #309. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.chabaudi:177

Q752E7              	100.00%		Q4XZM9              	100.00%
Q75AE9              	42.56%		
Bootstrap support for Q752E7 as seed ortholog is 77%.
Bootstrap support for Q4XZM9 as seed ortholog is 100%.

Group of orthologs #310. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 P.chabaudi:176

Q759L8              	100.00%		Q4XSB6              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for Q4XSB6 as seed ortholog is 100%.

Group of orthologs #311. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.chabaudi:175

Q75B77              	100.00%		Q4Y1T6              	100.00%
                    	       		Q4XJ63              	44.14%
Bootstrap support for Q75B77 as seed ortholog is 100%.
Bootstrap support for Q4Y1T6 as seed ortholog is 100%.

Group of orthologs #312. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:50

Q751F5              	100.00%		Q4XPW9              	100.00%
Bootstrap support for Q751F5 as seed ortholog is 96%.
Bootstrap support for Q4XPW9 as seed ortholog is 93%.

Group of orthologs #313. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.chabaudi:174

Q753I2              	100.00%		Q4XSX2              	100.00%
                    	       		Q4X7Y2              	30.51%
Bootstrap support for Q753I2 as seed ortholog is 100%.
Bootstrap support for Q4XSX2 as seed ortholog is 100%.

Group of orthologs #314. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.chabaudi:174

Q75D95              	100.00%		Q4Y0W9              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for Q4Y0W9 as seed ortholog is 100%.

Group of orthologs #315. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.chabaudi:173

Q756D3              	100.00%		Q4XN17              	100.00%
Q754W8              	18.72%		
Bootstrap support for Q756D3 as seed ortholog is 100%.
Bootstrap support for Q4XN17 as seed ortholog is 100%.

Group of orthologs #316. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.chabaudi:173

Q75EF1              	100.00%		Q4X2Q6              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for Q4X2Q6 as seed ortholog is 100%.

Group of orthologs #317. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.chabaudi:173

Q753F8              	100.00%		Q4Y5D1              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for Q4Y5D1 as seed ortholog is 100%.

Group of orthologs #318. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.chabaudi:173

Q759K2              	100.00%		Q4Y943              	100.00%
Bootstrap support for Q759K2 as seed ortholog is 100%.
Bootstrap support for Q4Y943 as seed ortholog is 100%.

Group of orthologs #319. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.chabaudi:171

Q756Y3              	100.00%		Q4XM05              	100.00%
                    	       		Q4XDY4              	38.14%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for Q4XM05 as seed ortholog is 100%.

Group of orthologs #320. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.chabaudi:22

Q759G2              	100.00%		Q4XQD5              	100.00%
Q757D0              	17.97%		
Q751A4              	17.41%		
Q74Z35              	15.88%		
Bootstrap support for Q759G2 as seed ortholog is 100%.
Bootstrap support for Q4XQD5 as seed ortholog is 74%.
Alternative seed ortholog is Q4Y8C2 (22 bits away from this cluster)

Group of orthologs #321. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.chabaudi:169

Q75C11              	100.00%		Q4XME6              	100.00%
Bootstrap support for Q75C11 as seed ortholog is 100%.
Bootstrap support for Q4XME6 as seed ortholog is 100%.

Group of orthologs #322. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.chabaudi:169

Q75E05              	100.00%		Q4XP58              	100.00%
Bootstrap support for Q75E05 as seed ortholog is 100%.
Bootstrap support for Q4XP58 as seed ortholog is 100%.

Group of orthologs #323. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.chabaudi:168

Q758U5              	100.00%		Q4XSM3              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for Q4XSM3 as seed ortholog is 100%.

Group of orthologs #324. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.chabaudi:167

Q74ZQ3              	100.00%		Q4XPX4              	100.00%
Bootstrap support for Q74ZQ3 as seed ortholog is 100%.
Bootstrap support for Q4XPX4 as seed ortholog is 100%.

Group of orthologs #325. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.chabaudi:167

Q75B16              	100.00%		Q4XY51              	100.00%
Bootstrap support for Q75B16 as seed ortholog is 100%.
Bootstrap support for Q4XY51 as seed ortholog is 100%.

Group of orthologs #326. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.chabaudi:166

Q755G4              	100.00%		Q4Y440              	100.00%
Q757T6              	10.97%		
Bootstrap support for Q755G4 as seed ortholog is 100%.
Bootstrap support for Q4Y440 as seed ortholog is 100%.

Group of orthologs #327. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.chabaudi:166

Q757B5              	100.00%		Q4Y5Y4              	100.00%
Bootstrap support for Q757B5 as seed ortholog is 100%.
Bootstrap support for Q4Y5Y4 as seed ortholog is 100%.

Group of orthologs #328. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.chabaudi:166

Q75ES9              	100.00%		Q4Y1D0              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for Q4Y1D0 as seed ortholog is 100%.

Group of orthologs #329. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.chabaudi:109

Q750N9              	100.00%		Q4XZS5              	100.00%
Bootstrap support for Q750N9 as seed ortholog is 99%.
Bootstrap support for Q4XZS5 as seed ortholog is 99%.

Group of orthologs #330. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 P.chabaudi:43

Q75F45              	100.00%		Q4XZQ6              	100.00%
Bootstrap support for Q75F45 as seed ortholog is 100%.
Bootstrap support for Q4XZQ6 as seed ortholog is 94%.

Group of orthologs #331. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.chabaudi:163

Q74ZA3              	100.00%		Q4XQG1              	100.00%
Bootstrap support for Q74ZA3 as seed ortholog is 100%.
Bootstrap support for Q4XQG1 as seed ortholog is 100%.

Group of orthologs #332. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 P.chabaudi:162

Q750X2              	100.00%		Q4XYI5              	100.00%
Bootstrap support for Q750X2 as seed ortholog is 100%.
Bootstrap support for Q4XYI5 as seed ortholog is 100%.

Group of orthologs #333. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:24 P.chabaudi:162

Q75A55              	100.00%		Q4Y8F5              	100.00%
Bootstrap support for Q75A55 as seed ortholog is 69%.
Alternative seed ortholog is Q755A1 (24 bits away from this cluster)
Bootstrap support for Q4Y8F5 as seed ortholog is 100%.

Group of orthologs #334. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.chabaudi:161

Q754Q0              	100.00%		Q4Y0H5              	100.00%
Bootstrap support for Q754Q0 as seed ortholog is 100%.
Bootstrap support for Q4Y0H5 as seed ortholog is 100%.

Group of orthologs #335. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.chabaudi:161

Q751M1              	100.00%		Q4Y3E2              	100.00%
Bootstrap support for Q751M1 as seed ortholog is 100%.
Bootstrap support for Q4Y3E2 as seed ortholog is 100%.

Group of orthologs #336. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 P.chabaudi:160

Q74ZE6              	100.00%		Q4XNR1              	100.00%
Bootstrap support for Q74ZE6 as seed ortholog is 100%.
Bootstrap support for Q4XNR1 as seed ortholog is 100%.

Group of orthologs #337. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 P.chabaudi:160

Q757Z7              	100.00%		Q4XXD4              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for Q4XXD4 as seed ortholog is 100%.

Group of orthologs #338. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 P.chabaudi:160

Q755M0              	100.00%		Q4Y699              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for Q4Y699 as seed ortholog is 100%.

Group of orthologs #339. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.chabaudi:159

Q759J1              	100.00%		Q4X4Q2              	100.00%
                    	       		Q4XCD9              	40.96%
Bootstrap support for Q759J1 as seed ortholog is 100%.
Bootstrap support for Q4X4Q2 as seed ortholog is 100%.

Group of orthologs #340. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.chabaudi:159

Q759C8              	100.00%		Q4XK10              	100.00%
Bootstrap support for Q759C8 as seed ortholog is 100%.
Bootstrap support for Q4XK10 as seed ortholog is 100%.

Group of orthologs #341. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.chabaudi:159

Q75E53              	100.00%		Q4XUN8              	100.00%
Bootstrap support for Q75E53 as seed ortholog is 100%.
Bootstrap support for Q4XUN8 as seed ortholog is 100%.

Group of orthologs #342. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.chabaudi:5

Q74ZL5              	100.00%		Q4XU65              	100.00%
Q8J1F8              	100.00%		
Bootstrap support for Q74ZL5 as seed ortholog is 100%.
Bootstrap support for Q8J1F8 as seed ortholog is 100%.
Bootstrap support for Q4XU65 as seed ortholog is 59%.
Alternative seed ortholog is Q4X800 (5 bits away from this cluster)

Group of orthologs #343. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.chabaudi:158

Q756X6              	100.00%		Q4Y385              	100.00%
                    	       		Q4XFZ3              	52.90%
Bootstrap support for Q756X6 as seed ortholog is 100%.
Bootstrap support for Q4Y385 as seed ortholog is 100%.

Group of orthologs #344. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.chabaudi:158

Q75BM3              	100.00%		Q4XEE4              	100.00%
Bootstrap support for Q75BM3 as seed ortholog is 100%.
Bootstrap support for Q4XEE4 as seed ortholog is 100%.

Group of orthologs #345. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.chabaudi:158

Q756I1              	100.00%		Q4XMQ4              	100.00%
Bootstrap support for Q756I1 as seed ortholog is 100%.
Bootstrap support for Q4XMQ4 as seed ortholog is 100%.

Group of orthologs #346. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.chabaudi:158

Q75B62              	100.00%		Q4Y061              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for Q4Y061 as seed ortholog is 100%.

Group of orthologs #347. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 P.chabaudi:100

Q751J4              	100.00%		Q4X7B3              	100.00%
Bootstrap support for Q751J4 as seed ortholog is 100%.
Bootstrap support for Q4X7B3 as seed ortholog is 100%.

Group of orthologs #348. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.chabaudi:62

Q758V2              	100.00%		Q4XF63              	100.00%
Bootstrap support for Q758V2 as seed ortholog is 94%.
Bootstrap support for Q4XF63 as seed ortholog is 89%.

Group of orthologs #349. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 P.chabaudi:45

Q74ZU5              	100.00%		Q4Y6X7              	100.00%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for Q4Y6X7 as seed ortholog is 85%.

Group of orthologs #350. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 P.chabaudi:157

Q75D84              	100.00%		Q4Y084              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for Q4Y084 as seed ortholog is 100%.

Group of orthologs #351. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.chabaudi:156

Q756E0              	100.00%		Q4XN87              	100.00%
Bootstrap support for Q756E0 as seed ortholog is 100%.
Bootstrap support for Q4XN87 as seed ortholog is 100%.

Group of orthologs #352. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.chabaudi:156

Q75BY4              	100.00%		Q4XXE7              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for Q4XXE7 as seed ortholog is 100%.

Group of orthologs #353. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.chabaudi:156

Q75C07              	100.00%		Q4Y163              	100.00%
Bootstrap support for Q75C07 as seed ortholog is 100%.
Bootstrap support for Q4Y163 as seed ortholog is 100%.

Group of orthologs #354. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 P.chabaudi:155

Q75ER3              	100.00%		Q4XFB2              	100.00%
Q75EP7              	16.96%		Q4XXZ1              	98.14%
Bootstrap support for Q75ER3 as seed ortholog is 100%.
Bootstrap support for Q4XFB2 as seed ortholog is 100%.

Group of orthologs #355. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:155

Q757T2              	100.00%		Q4XNJ0              	100.00%
Bootstrap support for Q757T2 as seed ortholog is 100%.
Bootstrap support for Q4XNJ0 as seed ortholog is 100%.

Group of orthologs #356. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 P.chabaudi:155

Q75B75              	100.00%		Q4XW09              	100.00%
Bootstrap support for Q75B75 as seed ortholog is 100%.
Bootstrap support for Q4XW09 as seed ortholog is 100%.

Group of orthologs #357. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 P.chabaudi:154

Q757J8              	100.00%		Q4XRL4              	100.00%
Q756H8              	21.36%		
Bootstrap support for Q757J8 as seed ortholog is 100%.
Bootstrap support for Q4XRL4 as seed ortholog is 100%.

Group of orthologs #358. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.chabaudi:37

Q75F38              	100.00%		Q4X2G4              	100.00%
                    	       		Q4XKW7              	22.06%
Bootstrap support for Q75F38 as seed ortholog is 99%.
Bootstrap support for Q4X2G4 as seed ortholog is 91%.

Group of orthologs #359. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 P.chabaudi:153

Q759D1              	100.00%		Q4XF37              	100.00%
Bootstrap support for Q759D1 as seed ortholog is 100%.
Bootstrap support for Q4XF37 as seed ortholog is 100%.

Group of orthologs #360. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 P.chabaudi:152

Q756F9              	100.00%		Q4Y8C8              	100.00%
                    	       		Q4Y384              	5.54%
Bootstrap support for Q756F9 as seed ortholog is 100%.
Bootstrap support for Q4Y8C8 as seed ortholog is 100%.

Group of orthologs #361. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:59

Q757F7              	100.00%		Q4Y7G6              	100.00%
Bootstrap support for Q757F7 as seed ortholog is 99%.
Bootstrap support for Q4Y7G6 as seed ortholog is 99%.

Group of orthologs #362. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 P.chabaudi:151

Q75C78              	100.00%		Q4XXS7              	100.00%
Q754F6              	53.16%		
Q756R7              	52.31%		
Q75E44              	41.88%		
Q753R1              	35.04%		
Q752J2              	29.06%		
Q74ZJ0              	11.20%		
Q75EX1              	6.07%		
Bootstrap support for Q75C78 as seed ortholog is 100%.
Bootstrap support for Q4XXS7 as seed ortholog is 100%.

Group of orthologs #363. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:28 P.chabaudi:151

Q74ZS1              	100.00%		Q4XVZ8              	100.00%
Bootstrap support for Q74ZS1 as seed ortholog is 75%.
Bootstrap support for Q4XVZ8 as seed ortholog is 100%.

Group of orthologs #364. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.chabaudi:151

Q75BJ3              	100.00%		Q4XM50              	100.00%
Bootstrap support for Q75BJ3 as seed ortholog is 99%.
Bootstrap support for Q4XM50 as seed ortholog is 100%.

Group of orthologs #365. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.chabaudi:149

Q756F7              	100.00%		Q4XC39              	100.00%
Bootstrap support for Q756F7 as seed ortholog is 100%.
Bootstrap support for Q4XC39 as seed ortholog is 100%.

Group of orthologs #366. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.chabaudi:32

Q75B81              	100.00%		Q4XXF3              	100.00%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for Q4XXF3 as seed ortholog is 80%.

Group of orthologs #367. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.chabaudi:148

Q75E02              	100.00%		Q4Y540              	100.00%
                    	       		Q4XFT0              	35.33%
Bootstrap support for Q75E02 as seed ortholog is 100%.
Bootstrap support for Q4Y540 as seed ortholog is 100%.

Group of orthologs #368. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:148

Q754Z0              	100.00%		Q4X5A0              	100.00%
Bootstrap support for Q754Z0 as seed ortholog is 99%.
Bootstrap support for Q4X5A0 as seed ortholog is 100%.

Group of orthologs #369. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.chabaudi:148

Q754N8              	100.00%		Q4XA32              	100.00%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for Q4XA32 as seed ortholog is 100%.

Group of orthologs #370. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.chabaudi:148

Q753N8              	100.00%		Q4XLW2              	100.00%
Bootstrap support for Q753N8 as seed ortholog is 100%.
Bootstrap support for Q4XLW2 as seed ortholog is 100%.

Group of orthologs #371. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.chabaudi:147

Q756K6              	100.00%		Q4XZD8              	100.00%
Bootstrap support for Q756K6 as seed ortholog is 100%.
Bootstrap support for Q4XZD8 as seed ortholog is 100%.

Group of orthologs #372. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.chabaudi:146

Q750P2              	100.00%		Q4XNG1              	100.00%
Bootstrap support for Q750P2 as seed ortholog is 100%.
Bootstrap support for Q4XNG1 as seed ortholog is 100%.

Group of orthologs #373. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.chabaudi:146

Q754R2              	100.00%		Q4XN04              	100.00%
Bootstrap support for Q754R2 as seed ortholog is 100%.
Bootstrap support for Q4XN04 as seed ortholog is 100%.

Group of orthologs #374. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.chabaudi:146

Q75CY6              	100.00%		Q4XI76              	100.00%
Bootstrap support for Q75CY6 as seed ortholog is 100%.
Bootstrap support for Q4XI76 as seed ortholog is 100%.

Group of orthologs #375. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.chabaudi:146

Q75B51              	100.00%		Q4XQ89              	100.00%
Bootstrap support for Q75B51 as seed ortholog is 100%.
Bootstrap support for Q4XQ89 as seed ortholog is 100%.

Group of orthologs #376. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.chabaudi:146

Q75EQ5              	100.00%		Q4XWF2              	100.00%
Bootstrap support for Q75EQ5 as seed ortholog is 100%.
Bootstrap support for Q4XWF2 as seed ortholog is 100%.

Group of orthologs #377. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.chabaudi:37

Q756G4              	100.00%		Q4XXM7              	100.00%
Bootstrap support for Q756G4 as seed ortholog is 100%.
Bootstrap support for Q4XXM7 as seed ortholog is 97%.

Group of orthologs #378. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.chabaudi:144

Q750G1              	100.00%		Q4XUS6              	100.00%
Bootstrap support for Q750G1 as seed ortholog is 100%.
Bootstrap support for Q4XUS6 as seed ortholog is 100%.

Group of orthologs #379. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.chabaudi:144

Q75A87              	100.00%		Q4XZH2              	100.00%
Bootstrap support for Q75A87 as seed ortholog is 100%.
Bootstrap support for Q4XZH2 as seed ortholog is 100%.

Group of orthologs #380. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:30 P.chabaudi:45

Q75C99              	100.00%		Q4XZ96              	100.00%
Bootstrap support for Q75C99 as seed ortholog is 72%.
Alternative seed ortholog is Q758L1 (30 bits away from this cluster)
Bootstrap support for Q4XZ96 as seed ortholog is 82%.

Group of orthologs #381. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:143

Q750C1              	100.00%		Q4XTW7              	100.00%
Bootstrap support for Q750C1 as seed ortholog is 95%.
Bootstrap support for Q4XTW7 as seed ortholog is 100%.

Group of orthologs #382. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 P.chabaudi:142

Q75BV1              	100.00%		Q4Y3E6              	100.00%
Bootstrap support for Q75BV1 as seed ortholog is 100%.
Bootstrap support for Q4Y3E6 as seed ortholog is 100%.

Group of orthologs #383. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.chabaudi:79

Q751Y9              	100.00%		Q4XQ56              	100.00%
Bootstrap support for Q751Y9 as seed ortholog is 100%.
Bootstrap support for Q4XQ56 as seed ortholog is 99%.

Group of orthologs #384. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.chabaudi:141

Q755C8              	100.00%		Q4XQA5              	100.00%
Bootstrap support for Q755C8 as seed ortholog is 100%.
Bootstrap support for Q4XQA5 as seed ortholog is 100%.

Group of orthologs #385. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 P.chabaudi:140

Q75F31              	100.00%		Q4XMS5              	100.00%
Bootstrap support for Q75F31 as seed ortholog is 100%.
Bootstrap support for Q4XMS5 as seed ortholog is 100%.

Group of orthologs #386. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.chabaudi:139

Q75CJ6              	100.00%		Q4XZ68              	100.00%
                    	       		Q4X8B1              	31.37%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for Q4XZ68 as seed ortholog is 100%.

Group of orthologs #387. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.chabaudi:139

Q757X1              	100.00%		Q4XS93              	100.00%
Bootstrap support for Q757X1 as seed ortholog is 100%.
Bootstrap support for Q4XS93 as seed ortholog is 100%.

Group of orthologs #388. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.chabaudi:139

Q75CU5              	100.00%		Q4Y2D4              	100.00%
Bootstrap support for Q75CU5 as seed ortholog is 100%.
Bootstrap support for Q4Y2D4 as seed ortholog is 100%.

Group of orthologs #389. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.chabaudi:138

Q754S9              	100.00%		Q4XWC9              	100.00%
Bootstrap support for Q754S9 as seed ortholog is 100%.
Bootstrap support for Q4XWC9 as seed ortholog is 100%.

Group of orthologs #390. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.chabaudi:138

Q75B56              	100.00%		Q4XWH8              	100.00%
Bootstrap support for Q75B56 as seed ortholog is 100%.
Bootstrap support for Q4XWH8 as seed ortholog is 100%.

Group of orthologs #391. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.chabaudi:138

Q75E36              	100.00%		Q4Y559              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for Q4Y559 as seed ortholog is 100%.

Group of orthologs #392. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.chabaudi:137

Q753X8              	100.00%		Q4XIU0              	100.00%
Bootstrap support for Q753X8 as seed ortholog is 100%.
Bootstrap support for Q4XIU0 as seed ortholog is 100%.

Group of orthologs #393. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.chabaudi:137

Q74ZN5              	100.00%		Q4XTN5              	100.00%
Bootstrap support for Q74ZN5 as seed ortholog is 100%.
Bootstrap support for Q4XTN5 as seed ortholog is 100%.

Group of orthologs #394. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.chabaudi:137

Q75CV0              	100.00%		Q4XW75              	100.00%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for Q4XW75 as seed ortholog is 100%.

Group of orthologs #395. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.chabaudi:136

Q75EM8              	100.00%		Q4XKX2              	100.00%
Bootstrap support for Q75EM8 as seed ortholog is 100%.
Bootstrap support for Q4XKX2 as seed ortholog is 100%.

Group of orthologs #396. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.chabaudi:57

Q753M7              	100.00%		Q4Y5X6              	100.00%
Bootstrap support for Q753M7 as seed ortholog is 100%.
Bootstrap support for Q4Y5X6 as seed ortholog is 100%.

Group of orthologs #397. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.chabaudi:63

Q757B7              	100.00%		Q4XWK1              	100.00%
Bootstrap support for Q757B7 as seed ortholog is 100%.
Bootstrap support for Q4XWK1 as seed ortholog is 99%.

Group of orthologs #398. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 P.chabaudi:135

Q757Y2              	100.00%		Q4Y3E5              	100.00%
Bootstrap support for Q757Y2 as seed ortholog is 100%.
Bootstrap support for Q4Y3E5 as seed ortholog is 100%.

Group of orthologs #399. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.chabaudi:134

Q758F3              	100.00%		Q4Y341              	100.00%
                    	       		Q4X6A3              	84.22%
Bootstrap support for Q758F3 as seed ortholog is 100%.
Bootstrap support for Q4Y341 as seed ortholog is 100%.

Group of orthologs #400. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.chabaudi:134

Q753X4              	100.00%		Q4XPD9              	100.00%
Bootstrap support for Q753X4 as seed ortholog is 100%.
Bootstrap support for Q4XPD9 as seed ortholog is 100%.

Group of orthologs #401. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.chabaudi:134

Q752H4              	100.00%		Q4XZR6              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for Q4XZR6 as seed ortholog is 100%.

Group of orthologs #402. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.chabaudi:134

Q75EW2              	100.00%		Q4XTR1              	100.00%
Bootstrap support for Q75EW2 as seed ortholog is 100%.
Bootstrap support for Q4XTR1 as seed ortholog is 100%.

Group of orthologs #403. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.chabaudi:134

Q75BN8              	100.00%		Q4Y1N7              	100.00%
Bootstrap support for Q75BN8 as seed ortholog is 100%.
Bootstrap support for Q4Y1N7 as seed ortholog is 100%.

Group of orthologs #404. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.chabaudi:133

Q75E54              	100.00%		Q4XYK2              	100.00%
                    	       		Q4X869              	52.20%
Bootstrap support for Q75E54 as seed ortholog is 100%.
Bootstrap support for Q4XYK2 as seed ortholog is 100%.

Group of orthologs #405. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.chabaudi:133

Q759W4              	100.00%		Q4XV54              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for Q4XV54 as seed ortholog is 100%.

Group of orthologs #406. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.chabaudi:132

Q759X6              	100.00%		Q4XZ38              	100.00%
                    	       		Q4XFK5              	42.37%
Bootstrap support for Q759X6 as seed ortholog is 100%.
Bootstrap support for Q4XZ38 as seed ortholog is 100%.

Group of orthologs #407. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.chabaudi:132

Q757J3              	100.00%		Q4XMW2              	100.00%
Bootstrap support for Q757J3 as seed ortholog is 99%.
Bootstrap support for Q4XMW2 as seed ortholog is 100%.

Group of orthologs #408. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.chabaudi:131

Q74ZP6              	100.00%		Q4Y1N5              	100.00%
Bootstrap support for Q74ZP6 as seed ortholog is 100%.
Bootstrap support for Q4Y1N5 as seed ortholog is 100%.

Group of orthologs #409. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.chabaudi:83

Q759V2              	100.00%		Q4Y066              	100.00%
Q75AW2              	20.99%		
Bootstrap support for Q759V2 as seed ortholog is 100%.
Bootstrap support for Q4Y066 as seed ortholog is 97%.

Group of orthologs #410. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.chabaudi:130

Q75B05              	100.00%		Q4XR41              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 100%.
Bootstrap support for Q4XR41 as seed ortholog is 100%.

Group of orthologs #411. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.chabaudi:130

Q75AV1              	100.00%		Q4Y429              	100.00%
Bootstrap support for Q75AV1 as seed ortholog is 100%.
Bootstrap support for Q4Y429 as seed ortholog is 100%.

Group of orthologs #412. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.chabaudi:129

Q75CG2              	100.00%		Q4XNI6              	100.00%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for Q4XNI6 as seed ortholog is 100%.

Group of orthologs #413. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.chabaudi:129

Q757H7              	100.00%		Q4XTK3              	100.00%
Bootstrap support for Q757H7 as seed ortholog is 100%.
Bootstrap support for Q4XTK3 as seed ortholog is 100%.

Group of orthologs #414. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.chabaudi:128

Q75DJ3              	100.00%		Q4XC20              	100.00%
Bootstrap support for Q75DJ3 as seed ortholog is 100%.
Bootstrap support for Q4XC20 as seed ortholog is 100%.

Group of orthologs #415. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.chabaudi:128

Q755M8              	100.00%		Q4XUB1              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 98%.
Bootstrap support for Q4XUB1 as seed ortholog is 100%.

Group of orthologs #416. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.chabaudi:128

Q751I5              	100.00%		Q4Y3R9              	100.00%
Bootstrap support for Q751I5 as seed ortholog is 100%.
Bootstrap support for Q4Y3R9 as seed ortholog is 100%.

Group of orthologs #417. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.chabaudi:128

Q755R8              	100.00%		Q4Y4H9              	100.00%
Bootstrap support for Q755R8 as seed ortholog is 100%.
Bootstrap support for Q4Y4H9 as seed ortholog is 100%.

Group of orthologs #418. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.chabaudi:127

Q750V1              	100.00%		Q4Y3D2              	100.00%
Bootstrap support for Q750V1 as seed ortholog is 89%.
Bootstrap support for Q4Y3D2 as seed ortholog is 100%.

Group of orthologs #419. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.chabaudi:127

Q74ZV2              	100.00%		Q4Y7U3              	100.00%
Bootstrap support for Q74ZV2 as seed ortholog is 100%.
Bootstrap support for Q4Y7U3 as seed ortholog is 100%.

Group of orthologs #420. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q759H8              	100.00%		Q4XNP6              	100.00%
                    	       		Q4X5V3              	45.27%
Bootstrap support for Q759H8 as seed ortholog is 100%.
Bootstrap support for Q4XNP6 as seed ortholog is 100%.

Group of orthologs #421. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q751I7              	100.00%		Q4XXU8              	100.00%
                    	       		Q4XA01              	60.71%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for Q4XXU8 as seed ortholog is 100%.

Group of orthologs #422. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q75DT3              	100.00%		Q4XGA6              	100.00%
Bootstrap support for Q75DT3 as seed ortholog is 100%.
Bootstrap support for Q4XGA6 as seed ortholog is 100%.

Group of orthologs #423. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q751L1              	100.00%		Q4XXC8              	100.00%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for Q4XXC8 as seed ortholog is 100%.

Group of orthologs #424. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.chabaudi:64

Q75F71              	100.00%		Q4XN90              	100.00%
Bootstrap support for Q75F71 as seed ortholog is 98%.
Bootstrap support for Q4XN90 as seed ortholog is 99%.

Group of orthologs #425. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q752N2              	100.00%		Q4Y1G5              	100.00%
Bootstrap support for Q752N2 as seed ortholog is 100%.
Bootstrap support for Q4Y1G5 as seed ortholog is 100%.

Group of orthologs #426. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q756J5              	100.00%		Q4XZG4              	100.00%
Bootstrap support for Q756J5 as seed ortholog is 100%.
Bootstrap support for Q4XZG4 as seed ortholog is 100%.

Group of orthologs #427. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q755N5              	100.00%		Q4Y6Z5              	100.00%
Bootstrap support for Q755N5 as seed ortholog is 100%.
Bootstrap support for Q4Y6Z5 as seed ortholog is 100%.

Group of orthologs #428. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.chabaudi:126

Q75C30              	100.00%		Q4Y2T1              	100.00%
Bootstrap support for Q75C30 as seed ortholog is 100%.
Bootstrap support for Q4Y2T1 as seed ortholog is 100%.

Group of orthologs #429. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 P.chabaudi:125

Q753Q2              	100.00%		Q4XDG5              	100.00%
Bootstrap support for Q753Q2 as seed ortholog is 100%.
Bootstrap support for Q4XDG5 as seed ortholog is 100%.

Group of orthologs #430. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 P.chabaudi:125

Q754W1              	100.00%		Q4Y2G5              	100.00%
Bootstrap support for Q754W1 as seed ortholog is 100%.
Bootstrap support for Q4Y2G5 as seed ortholog is 100%.

Group of orthologs #431. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.chabaudi:124

Q75AP9              	100.00%		Q4XIF7              	100.00%
                    	       		Q4XWA6              	50.68%
Bootstrap support for Q75AP9 as seed ortholog is 100%.
Bootstrap support for Q4XIF7 as seed ortholog is 100%.

Group of orthologs #432. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.chabaudi:124

Q751Q9              	100.00%		Q4XRT6              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for Q4XRT6 as seed ortholog is 100%.

Group of orthologs #433. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.chabaudi:124

Q75BZ9              	100.00%		Q4XUJ4              	100.00%
Bootstrap support for Q75BZ9 as seed ortholog is 100%.
Bootstrap support for Q4XUJ4 as seed ortholog is 100%.

Group of orthologs #434. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.chabaudi:124

Q75AJ9              	100.00%		Q4Y1F6              	100.00%
Bootstrap support for Q75AJ9 as seed ortholog is 100%.
Bootstrap support for Q4Y1F6 as seed ortholog is 100%.

Group of orthologs #435. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.chabaudi:124

Q75BR9              	100.00%		Q4Y2J5              	100.00%
Bootstrap support for Q75BR9 as seed ortholog is 100%.
Bootstrap support for Q4Y2J5 as seed ortholog is 100%.

Group of orthologs #436. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:123

Q752M3              	100.00%		Q4Y4W7              	100.00%
Bootstrap support for Q752M3 as seed ortholog is 89%.
Bootstrap support for Q4Y4W7 as seed ortholog is 100%.

Group of orthologs #437. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.chabaudi:123

Q9HFW3              	100.00%		Q4Y472              	100.00%
Bootstrap support for Q9HFW3 as seed ortholog is 100%.
Bootstrap support for Q4Y472 as seed ortholog is 100%.

Group of orthologs #438. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q75D36              	100.00%		Q4XXH6              	100.00%
                    	       		Q4XGW2              	48.38%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for Q4XXH6 as seed ortholog is 100%.

Group of orthologs #439. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q753F4              	100.00%		Q4XLY1              	100.00%
Bootstrap support for Q753F4 as seed ortholog is 100%.
Bootstrap support for Q4XLY1 as seed ortholog is 100%.

Group of orthologs #440. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q755J2              	100.00%		Q4XMA9              	100.00%
Bootstrap support for Q755J2 as seed ortholog is 100%.
Bootstrap support for Q4XMA9 as seed ortholog is 100%.

Group of orthologs #441. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q75AK5              	100.00%		Q4XP40              	100.00%
Bootstrap support for Q75AK5 as seed ortholog is 100%.
Bootstrap support for Q4XP40 as seed ortholog is 100%.

Group of orthologs #442. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q752M2              	100.00%		Q4XX27              	100.00%
Bootstrap support for Q752M2 as seed ortholog is 100%.
Bootstrap support for Q4XX27 as seed ortholog is 100%.

Group of orthologs #443. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q75A81              	100.00%		Q4XSD8              	100.00%
Bootstrap support for Q75A81 as seed ortholog is 100%.
Bootstrap support for Q4XSD8 as seed ortholog is 100%.

Group of orthologs #444. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.chabaudi:121

Q75CI9              	100.00%		Q4Y161              	100.00%
Bootstrap support for Q75CI9 as seed ortholog is 100%.
Bootstrap support for Q4Y161 as seed ortholog is 100%.

Group of orthologs #445. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.chabaudi:120

Q751C8              	100.00%		Q4X9F3              	100.00%
                    	       		Q4Y0Y5              	100.00%
Bootstrap support for Q751C8 as seed ortholog is 100%.
Bootstrap support for Q4X9F3 as seed ortholog is 100%.
Bootstrap support for Q4Y0Y5 as seed ortholog is 100%.

Group of orthologs #446. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.chabaudi:120

Q74Z38              	100.00%		Q4XTD6              	100.00%
Q75CW3              	17.97%		
Bootstrap support for Q74Z38 as seed ortholog is 100%.
Bootstrap support for Q4XTD6 as seed ortholog is 100%.

Group of orthologs #447. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.chabaudi:120

Q74Z71              	100.00%		Q4Y3U2              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for Q4Y3U2 as seed ortholog is 100%.

Group of orthologs #448. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.chabaudi:120

Q75F76              	100.00%		Q4Y8U6              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for Q4Y8U6 as seed ortholog is 100%.

Group of orthologs #449. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:32 P.chabaudi:20

Q754E6              	100.00%		Q4Y0G5              	100.00%
Bootstrap support for Q754E6 as seed ortholog is 91%.
Bootstrap support for Q4Y0G5 as seed ortholog is 86%.

Group of orthologs #450. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.chabaudi:119

Q755X2              	100.00%		Q4Y1X0              	100.00%
Bootstrap support for Q755X2 as seed ortholog is 100%.
Bootstrap support for Q4Y1X0 as seed ortholog is 100%.

Group of orthologs #451. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.chabaudi:119

Q750F7              	100.00%		Q4Y919              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for Q4Y919 as seed ortholog is 100%.

Group of orthologs #452. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.chabaudi:119

Q75F88              	100.00%		Q4Y495              	100.00%
Bootstrap support for Q75F88 as seed ortholog is 97%.
Bootstrap support for Q4Y495 as seed ortholog is 100%.

Group of orthologs #453. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.chabaudi:118

Q751F8              	100.00%		Q4XNZ2              	100.00%
Bootstrap support for Q751F8 as seed ortholog is 100%.
Bootstrap support for Q4XNZ2 as seed ortholog is 100%.

Group of orthologs #454. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.chabaudi:118

Q754I4              	100.00%		Q4XQ36              	100.00%
Bootstrap support for Q754I4 as seed ortholog is 90%.
Bootstrap support for Q4XQ36 as seed ortholog is 100%.

Group of orthologs #455. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.chabaudi:118

Q751U1              	100.00%		Q4Y564              	100.00%
Bootstrap support for Q751U1 as seed ortholog is 100%.
Bootstrap support for Q4Y564 as seed ortholog is 100%.

Group of orthologs #456. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.chabaudi:118

Q752Z8              	100.00%		Q4Y724              	100.00%
Bootstrap support for Q752Z8 as seed ortholog is 100%.
Bootstrap support for Q4Y724 as seed ortholog is 100%.

Group of orthologs #457. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 P.chabaudi:117

Q753B3              	100.00%		Q4XN37              	100.00%
Bootstrap support for Q753B3 as seed ortholog is 100%.
Bootstrap support for Q4XN37 as seed ortholog is 100%.

Group of orthologs #458. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.chabaudi:116

Q757A4              	100.00%		Q4XTQ7              	100.00%
                    	       		Q4XHB1              	41.29%
Bootstrap support for Q757A4 as seed ortholog is 98%.
Bootstrap support for Q4XTQ7 as seed ortholog is 100%.

Group of orthologs #459. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.chabaudi:116

Q75AT6              	100.00%		Q4XUC9              	100.00%
                    	       		Q4X8E8              	61.71%
Bootstrap support for Q75AT6 as seed ortholog is 100%.
Bootstrap support for Q4XUC9 as seed ortholog is 100%.

Group of orthologs #460. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.chabaudi:116

Q752U5              	100.00%		Q4XIJ3              	100.00%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for Q4XIJ3 as seed ortholog is 100%.

Group of orthologs #461. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.chabaudi:116

Q753R8              	100.00%		Q4XZM0              	100.00%
Bootstrap support for Q753R8 as seed ortholog is 96%.
Bootstrap support for Q4XZM0 as seed ortholog is 100%.

Group of orthologs #462. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.chabaudi:116

Q75DL6              	100.00%		Q4XVP9              	100.00%
Bootstrap support for Q75DL6 as seed ortholog is 98%.
Bootstrap support for Q4XVP9 as seed ortholog is 100%.

Group of orthologs #463. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.chabaudi:115

Q751U6              	100.00%		Q4Y7U9              	100.00%
                    	       		Q4XHK9              	76.77%
Bootstrap support for Q751U6 as seed ortholog is 100%.
Bootstrap support for Q4Y7U9 as seed ortholog is 100%.

Group of orthologs #464. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.chabaudi:115

Q75A30              	100.00%		Q4XWN6              	100.00%
Bootstrap support for Q75A30 as seed ortholog is 100%.
Bootstrap support for Q4XWN6 as seed ortholog is 100%.

Group of orthologs #465. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.chabaudi:115

Q75DX3              	100.00%		Q4XZ84              	100.00%
Bootstrap support for Q75DX3 as seed ortholog is 100%.
Bootstrap support for Q4XZ84 as seed ortholog is 100%.

Group of orthologs #466. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:13 P.chabaudi:20

Q75AG1              	100.00%		Q4XRI3              	100.00%
Bootstrap support for Q75AG1 as seed ortholog is 83%.
Bootstrap support for Q4XRI3 as seed ortholog is 60%.
Alternative seed ortholog is Q4Y2U4 (20 bits away from this cluster)

Group of orthologs #467. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 P.chabaudi:50

Q75C26              	100.00%		Q4XQV9              	100.00%
Bootstrap support for Q75C26 as seed ortholog is 100%.
Bootstrap support for Q4XQV9 as seed ortholog is 91%.

Group of orthologs #468. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.chabaudi:114

O60029              	100.00%		Q4Y231              	100.00%
Bootstrap support for O60029 as seed ortholog is 99%.
Bootstrap support for Q4Y231 as seed ortholog is 100%.

Group of orthologs #469. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 P.chabaudi:114

Q759K6              	100.00%		Q4Y3P8              	100.00%
Bootstrap support for Q759K6 as seed ortholog is 100%.
Bootstrap support for Q4Y3P8 as seed ortholog is 100%.

Group of orthologs #470. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:113

Q759W2              	100.00%		Q4Y2M1              	100.00%
                    	       		Q4X5K1              	15.56%
Bootstrap support for Q759W2 as seed ortholog is 97%.
Bootstrap support for Q4Y2M1 as seed ortholog is 100%.

Group of orthologs #471. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.chabaudi:113

Q74ZF7              	100.00%		Q4Y5R0              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for Q4Y5R0 as seed ortholog is 100%.

Group of orthologs #472. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:37 P.chabaudi:30

Q75AF2              	100.00%		Q4Y3H7              	100.00%
Bootstrap support for Q75AF2 as seed ortholog is 98%.
Bootstrap support for Q4Y3H7 as seed ortholog is 96%.

Group of orthologs #473. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 P.chabaudi:112

Q75CC6              	100.00%		Q4XPW6              	100.00%
Bootstrap support for Q75CC6 as seed ortholog is 100%.
Bootstrap support for Q4XPW6 as seed ortholog is 100%.

Group of orthologs #474. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.chabaudi:111

Q755H7              	100.00%		Q4Y245              	100.00%
                    	       		Q4XFT1              	86.92%
Bootstrap support for Q755H7 as seed ortholog is 100%.
Bootstrap support for Q4Y245 as seed ortholog is 100%.

Group of orthologs #475. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.chabaudi:111

Q75CK4              	100.00%		Q4XAC4              	100.00%
Bootstrap support for Q75CK4 as seed ortholog is 96%.
Bootstrap support for Q4XAC4 as seed ortholog is 100%.

Group of orthologs #476. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.chabaudi:111

Q75A80              	100.00%		Q4XXC0              	100.00%
Bootstrap support for Q75A80 as seed ortholog is 100%.
Bootstrap support for Q4XXC0 as seed ortholog is 100%.

Group of orthologs #477. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.chabaudi:111

Q757B6              	100.00%		Q4Y2Y2              	100.00%
Bootstrap support for Q757B6 as seed ortholog is 100%.
Bootstrap support for Q4Y2Y2 as seed ortholog is 100%.

Group of orthologs #478. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:111

Q753B5              	100.00%		Q4Y7X1              	100.00%
Bootstrap support for Q753B5 as seed ortholog is 97%.
Bootstrap support for Q4Y7X1 as seed ortholog is 100%.

Group of orthologs #479. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 P.chabaudi:110

Q759L9              	100.00%		Q4X4D3              	100.00%
Bootstrap support for Q759L9 as seed ortholog is 100%.
Bootstrap support for Q4X4D3 as seed ortholog is 100%.

Group of orthologs #480. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 P.chabaudi:110

Q75E22              	100.00%		Q4X4T7              	100.00%
Bootstrap support for Q75E22 as seed ortholog is 100%.
Bootstrap support for Q4X4T7 as seed ortholog is 100%.

Group of orthologs #481. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 P.chabaudi:110

Q75DH0              	100.00%		Q4XXL6              	100.00%
Bootstrap support for Q75DH0 as seed ortholog is 100%.
Bootstrap support for Q4XXL6 as seed ortholog is 100%.

Group of orthologs #482. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.chabaudi:109

Q75C33              	100.00%		Q4XFS7              	100.00%
                    	       		Q4XNF8              	51.28%
                    	       		Q4Y012              	48.96%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for Q4XFS7 as seed ortholog is 100%.

Group of orthologs #483. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.chabaudi:109

Q75AN3              	100.00%		Q4XU68              	100.00%
Q75AA3              	12.14%		Q4XN38              	5.27%
Bootstrap support for Q75AN3 as seed ortholog is 100%.
Bootstrap support for Q4XU68 as seed ortholog is 100%.

Group of orthologs #484. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.chabaudi:109

Q757N1              	100.00%		Q4XWU8              	100.00%
Q75DE4              	9.87%		
Bootstrap support for Q757N1 as seed ortholog is 100%.
Bootstrap support for Q4XWU8 as seed ortholog is 100%.

Group of orthologs #485. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.chabaudi:108

Q75DA3              	100.00%		Q4Y4J4              	100.00%
Bootstrap support for Q75DA3 as seed ortholog is 100%.
Bootstrap support for Q4Y4J4 as seed ortholog is 100%.

Group of orthologs #486. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.chabaudi:108

Q75D59              	100.00%		Q4Y874              	100.00%
Bootstrap support for Q75D59 as seed ortholog is 100%.
Bootstrap support for Q4Y874 as seed ortholog is 100%.

Group of orthologs #487. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.chabaudi:107

Q751D7              	100.00%		Q4XMF1              	100.00%
                    	       		Q4XGS9              	76.98%
Bootstrap support for Q751D7 as seed ortholog is 100%.
Bootstrap support for Q4XMF1 as seed ortholog is 100%.

Group of orthologs #488. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.chabaudi:107

Q751B5              	100.00%		Q4XQW7              	100.00%
Bootstrap support for Q751B5 as seed ortholog is 100%.
Bootstrap support for Q4XQW7 as seed ortholog is 100%.

Group of orthologs #489. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:32 P.chabaudi:107

Q759W8              	100.00%		Q4XS92              	100.00%
Bootstrap support for Q759W8 as seed ortholog is 82%.
Bootstrap support for Q4XS92 as seed ortholog is 100%.

Group of orthologs #490. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.chabaudi:106

Q75D70              	100.00%		Q4X5F1              	100.00%
Bootstrap support for Q75D70 as seed ortholog is 100%.
Bootstrap support for Q4X5F1 as seed ortholog is 100%.

Group of orthologs #491. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.chabaudi:106

Q75D68              	100.00%		Q4XM07              	100.00%
Bootstrap support for Q75D68 as seed ortholog is 100%.
Bootstrap support for Q4XM07 as seed ortholog is 100%.

Group of orthologs #492. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.chabaudi:106

Q750E4              	100.00%		Q4XYK1              	100.00%
Bootstrap support for Q750E4 as seed ortholog is 100%.
Bootstrap support for Q4XYK1 as seed ortholog is 100%.

Group of orthologs #493. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.chabaudi:105

Q758H4              	100.00%		Q4X4Q9              	100.00%
Bootstrap support for Q758H4 as seed ortholog is 100%.
Bootstrap support for Q4X4Q9 as seed ortholog is 100%.

Group of orthologs #494. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.chabaudi:12

Q754J6              	100.00%		Q4XZR0              	100.00%
Bootstrap support for Q754J6 as seed ortholog is 100%.
Bootstrap support for Q4XZR0 as seed ortholog is 79%.

Group of orthologs #495. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.chabaudi:104

Q757L4              	100.00%		Q4Y6B8              	100.00%
Q74ZL4              	99.33%		
Bootstrap support for Q757L4 as seed ortholog is 100%.
Bootstrap support for Q4Y6B8 as seed ortholog is 100%.

Group of orthologs #496. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.chabaudi:104

Q75AA8              	100.00%		Q4X8Q1              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for Q4X8Q1 as seed ortholog is 100%.

Group of orthologs #497. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.chabaudi:104

Q75BB6              	100.00%		Q4Y2N9              	100.00%
Bootstrap support for Q75BB6 as seed ortholog is 100%.
Bootstrap support for Q4Y2N9 as seed ortholog is 100%.

Group of orthologs #498. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.chabaudi:103

Q756H6              	100.00%		Q4XNN5              	100.00%
Bootstrap support for Q756H6 as seed ortholog is 100%.
Bootstrap support for Q4XNN5 as seed ortholog is 100%.

Group of orthologs #499. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.chabaudi:103

Q755S0              	100.00%		Q4XQG2              	100.00%
Bootstrap support for Q755S0 as seed ortholog is 100%.
Bootstrap support for Q4XQG2 as seed ortholog is 100%.

Group of orthologs #500. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.chabaudi:102

Q754Y9              	100.00%		Q4X329              	100.00%
Bootstrap support for Q754Y9 as seed ortholog is 100%.
Bootstrap support for Q4X329 as seed ortholog is 100%.

Group of orthologs #501. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.chabaudi:102

Q75EP2              	100.00%		Q4XUA9              	100.00%
Bootstrap support for Q75EP2 as seed ortholog is 100%.
Bootstrap support for Q4XUA9 as seed ortholog is 100%.

Group of orthologs #502. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.chabaudi:102

Q75CR9              	100.00%		Q4Y1V4              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for Q4Y1V4 as seed ortholog is 100%.

Group of orthologs #503. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.chabaudi:101

Q75AW7              	100.00%		Q4XES1              	100.00%
                    	       		Q4XRR2              	88.14%
                    	       		Q4X2B6              	5.81%
Bootstrap support for Q75AW7 as seed ortholog is 100%.
Bootstrap support for Q4XES1 as seed ortholog is 100%.

Group of orthologs #504. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.chabaudi:101

Q75A17              	100.00%		Q4X2I7              	100.00%
Bootstrap support for Q75A17 as seed ortholog is 100%.
Bootstrap support for Q4X2I7 as seed ortholog is 100%.

Group of orthologs #505. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:35 P.chabaudi:101

Q752E9              	100.00%		Q4XJC4              	100.00%
Bootstrap support for Q752E9 as seed ortholog is 78%.
Bootstrap support for Q4XJC4 as seed ortholog is 100%.

Group of orthologs #506. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.chabaudi:101

Q75BG9              	100.00%		Q4XRP9              	100.00%
Bootstrap support for Q75BG9 as seed ortholog is 100%.
Bootstrap support for Q4XRP9 as seed ortholog is 100%.

Group of orthologs #507. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.chabaudi:101

Q759T2              	100.00%		Q4XYS2              	100.00%
Bootstrap support for Q759T2 as seed ortholog is 100%.
Bootstrap support for Q4XYS2 as seed ortholog is 100%.

Group of orthologs #508. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.chabaudi:100

Q75DI4              	100.00%		Q4Y1K6              	100.00%
                    	       		Q4X6A7              	17.91%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for Q4Y1K6 as seed ortholog is 100%.

Group of orthologs #509. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.chabaudi:100

Q75BJ7              	100.00%		Q4XDU8              	100.00%
Bootstrap support for Q75BJ7 as seed ortholog is 100%.
Bootstrap support for Q4XDU8 as seed ortholog is 100%.

Group of orthologs #510. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.chabaudi:99

Q758V4              	100.00%		Q4Y5T0              	100.00%
                    	       		Q4XEW4              	47.89%
Bootstrap support for Q758V4 as seed ortholog is 100%.
Bootstrap support for Q4Y5T0 as seed ortholog is 100%.

Group of orthologs #511. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.chabaudi:99

Q759T0              	100.00%		Q4XTM8              	100.00%
Bootstrap support for Q759T0 as seed ortholog is 100%.
Bootstrap support for Q4XTM8 as seed ortholog is 100%.

Group of orthologs #512. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.chabaudi:99

Q758W6              	100.00%		Q4XWF0              	100.00%
Bootstrap support for Q758W6 as seed ortholog is 100%.
Bootstrap support for Q4XWF0 as seed ortholog is 100%.

Group of orthologs #513. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.chabaudi:98

Q75CJ5              	100.00%		Q4XGW1              	100.00%
Bootstrap support for Q75CJ5 as seed ortholog is 100%.
Bootstrap support for Q4XGW1 as seed ortholog is 100%.

Group of orthologs #514. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.chabaudi:98

Q75AJ0              	100.00%		Q4XNP8              	100.00%
Bootstrap support for Q75AJ0 as seed ortholog is 100%.
Bootstrap support for Q4XNP8 as seed ortholog is 100%.

Group of orthologs #515. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.chabaudi:98

Q758N4              	100.00%		Q4XYQ9              	100.00%
Bootstrap support for Q758N4 as seed ortholog is 100%.
Bootstrap support for Q4XYQ9 as seed ortholog is 100%.

Group of orthologs #516. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:97

Q75BC2              	100.00%		Q4X2I8              	100.00%
Bootstrap support for Q75BC2 as seed ortholog is 100%.
Bootstrap support for Q4X2I8 as seed ortholog is 100%.

Group of orthologs #517. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:19

Q751A8              	100.00%		Q4XE77              	100.00%
Bootstrap support for Q751A8 as seed ortholog is 100%.
Bootstrap support for Q4XE77 as seed ortholog is 10%.
Alternative seed ortholog is Q4XJ22 (19 bits away from this cluster)

Group of orthologs #518. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:97

Q75AS8              	100.00%		Q4XKN6              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for Q4XKN6 as seed ortholog is 100%.

Group of orthologs #519. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:37 P.chabaudi:51

Q75CQ0              	100.00%		Q4XKV3              	100.00%
Bootstrap support for Q75CQ0 as seed ortholog is 98%.
Bootstrap support for Q4XKV3 as seed ortholog is 99%.

Group of orthologs #520. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:97

Q75C28              	100.00%		Q4XXA8              	100.00%
Bootstrap support for Q75C28 as seed ortholog is 100%.
Bootstrap support for Q4XXA8 as seed ortholog is 100%.

Group of orthologs #521. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.chabaudi:97

Q75AK2              	100.00%		Q4Y8N1              	100.00%
Bootstrap support for Q75AK2 as seed ortholog is 100%.
Bootstrap support for Q4Y8N1 as seed ortholog is 100%.

Group of orthologs #522. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.chabaudi:96

Q751T9              	100.00%		Q4Y555              	100.00%
Bootstrap support for Q751T9 as seed ortholog is 100%.
Bootstrap support for Q4Y555 as seed ortholog is 100%.

Group of orthologs #523. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.chabaudi:96

Q759B9              	100.00%		Q4Y487              	100.00%
Bootstrap support for Q759B9 as seed ortholog is 100%.
Bootstrap support for Q4Y487 as seed ortholog is 100%.

Group of orthologs #524. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.chabaudi:95

Q753G9              	100.00%		Q4Y5X4              	100.00%
Q755L9              	9.75%		
Q755M1              	9.75%		
Q755L8              	8.30%		
Q757Q4              	7.43%		
Q75A29              	7.14%		
Q759Y4              	5.69%		
Q752H1              	5.31%		
Q751I3              	5.21%		
Bootstrap support for Q753G9 as seed ortholog is 100%.
Bootstrap support for Q4Y5X4 as seed ortholog is 100%.

Group of orthologs #525. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.chabaudi:95

Q754C5              	100.00%		Q4XZW7              	100.00%
Q758U4              	30.91%		
Bootstrap support for Q754C5 as seed ortholog is 100%.
Bootstrap support for Q4XZW7 as seed ortholog is 100%.

Group of orthologs #526. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.chabaudi:95

Q75C61              	100.00%		Q4Y0N7              	100.00%
                    	       		Q4X6T5              	68.24%
Bootstrap support for Q75C61 as seed ortholog is 100%.
Bootstrap support for Q4Y0N7 as seed ortholog is 100%.

Group of orthologs #527. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.chabaudi:95

Q75A56              	100.00%		Q4X3S5              	100.00%
Bootstrap support for Q75A56 as seed ortholog is 100%.
Bootstrap support for Q4X3S5 as seed ortholog is 100%.

Group of orthologs #528. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.chabaudi:95

Q75DF1              	100.00%		Q4XFJ8              	100.00%
Bootstrap support for Q75DF1 as seed ortholog is 100%.
Bootstrap support for Q4XFJ8 as seed ortholog is 100%.

Group of orthologs #529. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:8 P.chabaudi:1

Q758V7              	100.00%		Q4XVG9              	100.00%
Bootstrap support for Q758V7 as seed ortholog is 59%.
Alternative seed ortholog is Q75CH9 (8 bits away from this cluster)
Bootstrap support for Q4XVG9 as seed ortholog is 51%.
Alternative seed ortholog is Q4XWG1 (1 bits away from this cluster)

Group of orthologs #530. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.chabaudi:23

Q75A65              	100.00%		Q4XGU5              	100.00%
                    	       		Q4XZK0              	100.00%
Bootstrap support for Q75A65 as seed ortholog is 100%.
Bootstrap support for Q4XGU5 as seed ortholog is 87%.
Bootstrap support for Q4XZK0 as seed ortholog is 87%.

Group of orthologs #531. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.chabaudi:94

Q75C81              	100.00%		Q4XHZ1              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 100%.
Bootstrap support for Q4XHZ1 as seed ortholog is 100%.

Group of orthologs #532. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.chabaudi:42

Q753W2              	100.00%		Q4XRD0              	100.00%
Bootstrap support for Q753W2 as seed ortholog is 100%.
Bootstrap support for Q4XRD0 as seed ortholog is 88%.

Group of orthologs #533. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.chabaudi:94

Q757D7              	100.00%		Q4Y079              	100.00%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for Q4Y079 as seed ortholog is 100%.

Group of orthologs #534. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.chabaudi:94

Q75DQ2              	100.00%		Q4Y895              	100.00%
Bootstrap support for Q75DQ2 as seed ortholog is 100%.
Bootstrap support for Q4Y895 as seed ortholog is 100%.

Group of orthologs #535. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:11 P.chabaudi:93

Q751L2              	100.00%		Q4XPT4              	100.00%
Q750M1              	9.25%		
Q75CE7              	5.90%		
Bootstrap support for Q751L2 as seed ortholog is 81%.
Bootstrap support for Q4XPT4 as seed ortholog is 100%.

Group of orthologs #536. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.chabaudi:93

Q756U0              	100.00%		Q4XYR5              	100.00%
Bootstrap support for Q756U0 as seed ortholog is 100%.
Bootstrap support for Q4XYR5 as seed ortholog is 100%.

Group of orthologs #537. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.chabaudi:92

Q759W3              	100.00%		Q4XEX1              	100.00%
                    	       		Q4XX40              	77.81%
Bootstrap support for Q759W3 as seed ortholog is 100%.
Bootstrap support for Q4XEX1 as seed ortholog is 100%.

Group of orthologs #538. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.chabaudi:92

Q750H2              	100.00%		Q4XYM3              	100.00%
                    	       		Q4X628              	56.69%
Bootstrap support for Q750H2 as seed ortholog is 100%.
Bootstrap support for Q4XYM3 as seed ortholog is 100%.

Group of orthologs #539. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.chabaudi:92

Q754I2              	100.00%		Q4XV11              	100.00%
Bootstrap support for Q754I2 as seed ortholog is 100%.
Bootstrap support for Q4XV11 as seed ortholog is 100%.

Group of orthologs #540. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.chabaudi:92

Q75A73              	100.00%		Q4XYB1              	100.00%
Bootstrap support for Q75A73 as seed ortholog is 100%.
Bootstrap support for Q4XYB1 as seed ortholog is 100%.

Group of orthologs #541. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.chabaudi:13

Q754W2              	100.00%		Q4Y845              	100.00%
Bootstrap support for Q754W2 as seed ortholog is 100%.
Bootstrap support for Q4Y845 as seed ortholog is 60%.
Alternative seed ortholog is Q4XPB6 (13 bits away from this cluster)

Group of orthologs #542. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:91

Q75BL6              	100.00%		Q4Y0N6              	100.00%
                    	       		Q4X7M1              	72.73%
Bootstrap support for Q75BL6 as seed ortholog is 100%.
Bootstrap support for Q4Y0N6 as seed ortholog is 100%.

Group of orthologs #543. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:91

Q75C52              	100.00%		Q4XA41              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for Q4XA41 as seed ortholog is 100%.

Group of orthologs #544. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:26 P.chabaudi:26

Q754G3              	100.00%		Q4XMS8              	100.00%
Bootstrap support for Q754G3 as seed ortholog is 46%.
Alternative seed ortholog is Q75E07 (26 bits away from this cluster)
Bootstrap support for Q4XMS8 as seed ortholog is 57%.
Alternative seed ortholog is Q4Y357 (26 bits away from this cluster)

Group of orthologs #545. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.chabaudi:91

Q74ZC2              	100.00%		Q4XYI0              	100.00%
Bootstrap support for Q74ZC2 as seed ortholog is 99%.
Bootstrap support for Q4XYI0 as seed ortholog is 100%.

Group of orthologs #546. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:91

Q759Q8              	100.00%		Q4XUS5              	100.00%
Bootstrap support for Q759Q8 as seed ortholog is 100%.
Bootstrap support for Q4XUS5 as seed ortholog is 100%.

Group of orthologs #547. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:91

Q754H4              	100.00%		Q4Y1K5              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for Q4Y1K5 as seed ortholog is 100%.

Group of orthologs #548. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.chabaudi:91

Q757D9              	100.00%		Q4Y641              	100.00%
Bootstrap support for Q757D9 as seed ortholog is 100%.
Bootstrap support for Q4Y641 as seed ortholog is 100%.

Group of orthologs #549. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.chabaudi:90

Q75EN5              	100.00%		Q4XVX3              	100.00%
Bootstrap support for Q75EN5 as seed ortholog is 100%.
Bootstrap support for Q4XVX3 as seed ortholog is 100%.

Group of orthologs #550. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.chabaudi:40

Q75EU7              	100.00%		Q4X547              	100.00%
Bootstrap support for Q75EU7 as seed ortholog is 100%.
Bootstrap support for Q4X547 as seed ortholog is 76%.

Group of orthologs #551. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.chabaudi:36

Q75E82              	100.00%		Q4X788              	100.00%
Bootstrap support for Q75E82 as seed ortholog is 98%.
Bootstrap support for Q4X788 as seed ortholog is 92%.

Group of orthologs #552. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.chabaudi:44

Q75F44              	100.00%		Q4XXV8              	100.00%
Bootstrap support for Q75F44 as seed ortholog is 100%.
Bootstrap support for Q4XXV8 as seed ortholog is 96%.

Group of orthologs #553. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.chabaudi:88

Q751A9              	100.00%		Q4Y6X8              	100.00%
Bootstrap support for Q751A9 as seed ortholog is 100%.
Bootstrap support for Q4Y6X8 as seed ortholog is 100%.

Group of orthologs #554. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.chabaudi:88

Q753B6              	100.00%		Q4Y963              	100.00%
Bootstrap support for Q753B6 as seed ortholog is 100%.
Bootstrap support for Q4Y963 as seed ortholog is 100%.

Group of orthologs #555. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.chabaudi:87

Q752Z2              	100.00%		Q4XED3              	100.00%
                    	       		Q4XM75              	74.68%
Bootstrap support for Q752Z2 as seed ortholog is 100%.
Bootstrap support for Q4XED3 as seed ortholog is 100%.

Group of orthologs #556. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.chabaudi:87

Q75B82              	100.00%		Q4XT30              	100.00%
                    	       		Q4X5D0              	21.49%
Bootstrap support for Q75B82 as seed ortholog is 100%.
Bootstrap support for Q4XT30 as seed ortholog is 100%.

Group of orthologs #557. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.chabaudi:87

Q75DM3              	100.00%		Q4Y0E2              	100.00%
                    	       		Q4X6R1              	47.57%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for Q4Y0E2 as seed ortholog is 100%.

Group of orthologs #558. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.chabaudi:87

Q753F1              	100.00%		Q4XM56              	100.00%
Bootstrap support for Q753F1 as seed ortholog is 100%.
Bootstrap support for Q4XM56 as seed ortholog is 100%.

Group of orthologs #559. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.chabaudi:87

Q75CC4              	100.00%		Q4XN40              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for Q4XN40 as seed ortholog is 100%.

Group of orthologs #560. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.chabaudi:86

Q750K3              	100.00%		Q4XEL9              	100.00%
Bootstrap support for Q750K3 as seed ortholog is 100%.
Bootstrap support for Q4XEL9 as seed ortholog is 100%.

Group of orthologs #561. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.chabaudi:86

Q751S0              	100.00%		Q4Y0A9              	100.00%
Bootstrap support for Q751S0 as seed ortholog is 100%.
Bootstrap support for Q4Y0A9 as seed ortholog is 100%.

Group of orthologs #562. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.chabaudi:86

Q752K5              	100.00%		Q4Y2H8              	100.00%
Bootstrap support for Q752K5 as seed ortholog is 100%.
Bootstrap support for Q4Y2H8 as seed ortholog is 100%.

Group of orthologs #563. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.chabaudi:86

Q75EE2              	100.00%		Q4Y0U0              	100.00%
Bootstrap support for Q75EE2 as seed ortholog is 100%.
Bootstrap support for Q4Y0U0 as seed ortholog is 100%.

Group of orthologs #564. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.chabaudi:85

Q74ZD8              	100.00%		Q4XRN9              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for Q4XRN9 as seed ortholog is 100%.

Group of orthologs #565. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.chabaudi:85

Q755Y0              	100.00%		Q4Y366              	100.00%
Bootstrap support for Q755Y0 as seed ortholog is 100%.
Bootstrap support for Q4Y366 as seed ortholog is 100%.

Group of orthologs #566. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.chabaudi:84

Q755P0              	100.00%		Q4XX86              	100.00%
Bootstrap support for Q755P0 as seed ortholog is 100%.
Bootstrap support for Q4XX86 as seed ortholog is 100%.

Group of orthologs #567. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.chabaudi:84

Q754K4              	100.00%		Q4XZG0              	100.00%
Bootstrap support for Q754K4 as seed ortholog is 100%.
Bootstrap support for Q4XZG0 as seed ortholog is 100%.

Group of orthologs #568. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:4 P.chabaudi:84

Q758H9              	100.00%		Q4Y7Z4              	100.00%
Bootstrap support for Q758H9 as seed ortholog is 74%.
Alternative seed ortholog is Q75A83 (4 bits away from this cluster)
Bootstrap support for Q4Y7Z4 as seed ortholog is 100%.

Group of orthologs #569. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:83

Q75EH2              	100.00%		Q4XFX0              	100.00%
                    	       		Q4XY41              	55.57%
Bootstrap support for Q75EH2 as seed ortholog is 100%.
Bootstrap support for Q4XFX0 as seed ortholog is 100%.

Group of orthologs #570. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:83

Q756V2              	100.00%		Q4X638              	100.00%
Bootstrap support for Q756V2 as seed ortholog is 100%.
Bootstrap support for Q4X638 as seed ortholog is 100%.

Group of orthologs #571. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:83

Q752U6              	100.00%		Q4XZ61              	100.00%
Bootstrap support for Q752U6 as seed ortholog is 100%.
Bootstrap support for Q4XZ61 as seed ortholog is 100%.

Group of orthologs #572. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:83

Q75D12              	100.00%		Q4XS77              	100.00%
Bootstrap support for Q75D12 as seed ortholog is 100%.
Bootstrap support for Q4XS77 as seed ortholog is 100%.

Group of orthologs #573. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:83

Q759U5              	100.00%		Q4XX80              	100.00%
Bootstrap support for Q759U5 as seed ortholog is 100%.
Bootstrap support for Q4XX80 as seed ortholog is 100%.

Group of orthologs #574. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.chabaudi:83

Q75CQ1              	100.00%		Q4XZZ8              	100.00%
Bootstrap support for Q75CQ1 as seed ortholog is 100%.
Bootstrap support for Q4XZZ8 as seed ortholog is 100%.

Group of orthologs #575. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.chabaudi:82

Q75AC0              	100.00%		Q4X9G0              	100.00%
Bootstrap support for Q75AC0 as seed ortholog is 100%.
Bootstrap support for Q4X9G0 as seed ortholog is 100%.

Group of orthologs #576. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.chabaudi:82

Q75BV8              	100.00%		Q4XQK0              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for Q4XQK0 as seed ortholog is 100%.

Group of orthologs #577. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.chabaudi:82

Q752L4              	100.00%		Q4Y855              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for Q4Y855 as seed ortholog is 100%.

Group of orthologs #578. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:14 P.chabaudi:81

Q75C54              	100.00%		Q4XNV0              	100.00%
Bootstrap support for Q75C54 as seed ortholog is 70%.
Alternative seed ortholog is Q75CJ7 (14 bits away from this cluster)
Bootstrap support for Q4XNV0 as seed ortholog is 100%.

Group of orthologs #579. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.chabaudi:80

Q757U0              	100.00%		Q4XUB7              	100.00%
Bootstrap support for Q757U0 as seed ortholog is 100%.
Bootstrap support for Q4XUB7 as seed ortholog is 100%.

Group of orthologs #580. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.chabaudi:80

Q74ZF3              	100.00%		Q4Y471              	100.00%
Bootstrap support for Q74ZF3 as seed ortholog is 100%.
Bootstrap support for Q4Y471 as seed ortholog is 100%.

Group of orthologs #581. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.chabaudi:80

Q75CD4              	100.00%		Q4XUW4              	100.00%
Bootstrap support for Q75CD4 as seed ortholog is 100%.
Bootstrap support for Q4XUW4 as seed ortholog is 100%.

Group of orthologs #582. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.chabaudi:80

Q75EU5              	100.00%		Q4XYC4              	100.00%
Bootstrap support for Q75EU5 as seed ortholog is 100%.
Bootstrap support for Q4XYC4 as seed ortholog is 100%.

Group of orthologs #583. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.chabaudi:13

Q757M1              	100.00%		Q4XDW5              	100.00%
Bootstrap support for Q757M1 as seed ortholog is 100%.
Bootstrap support for Q4XDW5 as seed ortholog is 62%.
Alternative seed ortholog is Q4XT57 (13 bits away from this cluster)

Group of orthologs #584. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.chabaudi:79

Q756T5              	100.00%		Q4XVD9              	100.00%
Bootstrap support for Q756T5 as seed ortholog is 100%.
Bootstrap support for Q4XVD9 as seed ortholog is 100%.

Group of orthologs #585. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.chabaudi:79

Q750U6              	100.00%		Q4Y7X8              	100.00%
Bootstrap support for Q750U6 as seed ortholog is 100%.
Bootstrap support for Q4Y7X8 as seed ortholog is 100%.

Group of orthologs #586. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.chabaudi:78

Q75G34              	100.00%		Q4XDQ6              	100.00%
                    	       		Q4Y2X7              	61.02%
                    	       		Q4X557              	46.33%
                    	       		Q4XSQ9              	37.19%
Bootstrap support for Q75G34 as seed ortholog is 100%.
Bootstrap support for Q4XDQ6 as seed ortholog is 100%.

Group of orthologs #587. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.chabaudi:78

Q757M2              	100.00%		Q4XLH6              	100.00%
Bootstrap support for Q757M2 as seed ortholog is 100%.
Bootstrap support for Q4XLH6 as seed ortholog is 100%.

Group of orthologs #588. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.chabaudi:78

Q75E17              	100.00%		Q4XZM3              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 100%.
Bootstrap support for Q4XZM3 as seed ortholog is 100%.

Group of orthologs #589. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.chabaudi:77

Q750F9              	100.00%		Q4Y0C6              	100.00%
                    	       		Q4XJ40              	52.39%
Bootstrap support for Q750F9 as seed ortholog is 100%.
Bootstrap support for Q4Y0C6 as seed ortholog is 100%.

Group of orthologs #590. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.chabaudi:77

Q753N1              	100.00%		Q4XM88              	100.00%
Bootstrap support for Q753N1 as seed ortholog is 100%.
Bootstrap support for Q4XM88 as seed ortholog is 100%.

Group of orthologs #591. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.chabaudi:77

Q75E80              	100.00%		Q4XN23              	100.00%
Bootstrap support for Q75E80 as seed ortholog is 100%.
Bootstrap support for Q4XN23 as seed ortholog is 100%.

Group of orthologs #592. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.chabaudi:77

Q75A25              	100.00%		Q4XUJ0              	100.00%
Bootstrap support for Q75A25 as seed ortholog is 100%.
Bootstrap support for Q4XUJ0 as seed ortholog is 100%.

Group of orthologs #593. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.chabaudi:77

Q754V8              	100.00%		Q4XZX0              	100.00%
Bootstrap support for Q754V8 as seed ortholog is 100%.
Bootstrap support for Q4XZX0 as seed ortholog is 100%.

Group of orthologs #594. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:25 P.chabaudi:21

Q75C20              	100.00%		Q4XUI6              	100.00%
Bootstrap support for Q75C20 as seed ortholog is 77%.
Bootstrap support for Q4XUI6 as seed ortholog is 70%.
Alternative seed ortholog is Q4XMR9 (21 bits away from this cluster)

Group of orthologs #595. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.chabaudi:76

Q750R8              	100.00%		Q4XE70              	100.00%
Bootstrap support for Q750R8 as seed ortholog is 100%.
Bootstrap support for Q4XE70 as seed ortholog is 100%.

Group of orthologs #596. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.chabaudi:76

Q757P1              	100.00%		Q4XRC1              	100.00%
Bootstrap support for Q757P1 as seed ortholog is 100%.
Bootstrap support for Q4XRC1 as seed ortholog is 100%.

Group of orthologs #597. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.chabaudi:76

Q752J8              	100.00%		Q4XZC0              	100.00%
Bootstrap support for Q752J8 as seed ortholog is 100%.
Bootstrap support for Q4XZC0 as seed ortholog is 100%.

Group of orthologs #598. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.chabaudi:76

Q755Q7              	100.00%		Q4Y0J9              	100.00%
Bootstrap support for Q755Q7 as seed ortholog is 100%.
Bootstrap support for Q4Y0J9 as seed ortholog is 100%.

Group of orthologs #599. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.chabaudi:76

Q75AB1              	100.00%		Q4Y1V5              	100.00%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for Q4Y1V5 as seed ortholog is 100%.

Group of orthologs #600. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.chabaudi:75

Q753F6              	100.00%		Q4XG68              	100.00%
Bootstrap support for Q753F6 as seed ortholog is 100%.
Bootstrap support for Q4XG68 as seed ortholog is 100%.

Group of orthologs #601. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.chabaudi:75

Q75EG9              	100.00%		Q4XBG7              	100.00%
Bootstrap support for Q75EG9 as seed ortholog is 100%.
Bootstrap support for Q4XBG7 as seed ortholog is 100%.

Group of orthologs #602. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.chabaudi:75

Q757G1              	100.00%		Q4XYP2              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for Q4XYP2 as seed ortholog is 100%.

Group of orthologs #603. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.chabaudi:74

Q751V7              	100.00%		Q4XT37              	100.00%
Bootstrap support for Q751V7 as seed ortholog is 100%.
Bootstrap support for Q4XT37 as seed ortholog is 100%.

Group of orthologs #604. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.chabaudi:74

Q75CF1              	100.00%		Q4XS21              	100.00%
Bootstrap support for Q75CF1 as seed ortholog is 100%.
Bootstrap support for Q4XS21 as seed ortholog is 100%.

Group of orthologs #605. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q759X7              	100.00%		Q4XEK5              	100.00%
                    	       		Q4XWS1              	63.11%
Bootstrap support for Q759X7 as seed ortholog is 100%.
Bootstrap support for Q4XEK5 as seed ortholog is 100%.

Group of orthologs #606. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q759B8              	100.00%		Q4Y282              	100.00%
Q75A69              	15.25%		
Bootstrap support for Q759B8 as seed ortholog is 100%.
Bootstrap support for Q4Y282 as seed ortholog is 100%.

Group of orthologs #607. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q75B41              	100.00%		Q4Y6N7              	100.00%
Q754C4              	6.60%		
Bootstrap support for Q75B41 as seed ortholog is 100%.
Bootstrap support for Q4Y6N7 as seed ortholog is 100%.

Group of orthologs #608. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q750G9              	100.00%		Q4XR27              	100.00%
Bootstrap support for Q750G9 as seed ortholog is 100%.
Bootstrap support for Q4XR27 as seed ortholog is 100%.

Group of orthologs #609. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q75C23              	100.00%		Q4XLK3              	100.00%
Bootstrap support for Q75C23 as seed ortholog is 100%.
Bootstrap support for Q4XLK3 as seed ortholog is 100%.

Group of orthologs #610. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q750C6              	100.00%		Q4Y0E1              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 100%.
Bootstrap support for Q4Y0E1 as seed ortholog is 100%.

Group of orthologs #611. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q754J0              	100.00%		Q4XYV1              	100.00%
Bootstrap support for Q754J0 as seed ortholog is 100%.
Bootstrap support for Q4XYV1 as seed ortholog is 100%.

Group of orthologs #612. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.chabaudi:73

Q75DF7              	100.00%		Q4XTK9              	100.00%
Bootstrap support for Q75DF7 as seed ortholog is 100%.
Bootstrap support for Q4XTK9 as seed ortholog is 100%.

Group of orthologs #613. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.chabaudi:72

Q75AS5              	100.00%		Q4XXC9              	100.00%
Q75AS6              	60.59%		Q4XPR9              	7.25%
Q75AL8              	26.71%		
Bootstrap support for Q75AS5 as seed ortholog is 100%.
Bootstrap support for Q4XXC9 as seed ortholog is 100%.

Group of orthologs #614. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:20 P.chabaudi:72

Q75BN2              	100.00%		Q4XRZ5              	100.00%
Q75BE1              	10.67%		
Bootstrap support for Q75BN2 as seed ortholog is 68%.
Alternative seed ortholog is Q751C9 (20 bits away from this cluster)
Bootstrap support for Q4XRZ5 as seed ortholog is 100%.

Group of orthologs #615. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.chabaudi:72

Q75DI7              	100.00%		Q4Y0Y2              	100.00%
Q75BU6              	6.48%		
Bootstrap support for Q75DI7 as seed ortholog is 100%.
Bootstrap support for Q4Y0Y2 as seed ortholog is 100%.

Group of orthologs #616. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.chabaudi:72

Q752P7              	100.00%		Q4Y5I6              	100.00%
Bootstrap support for Q752P7 as seed ortholog is 100%.
Bootstrap support for Q4Y5I6 as seed ortholog is 100%.

Group of orthologs #617. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.chabaudi:71

Q759X1              	100.00%		Q4X6W0              	100.00%
Q759M4              	38.68%		Q4XTG3              	34.09%
Q75AT4              	24.56%		Q4XW35              	22.73%
Bootstrap support for Q759X1 as seed ortholog is 100%.
Bootstrap support for Q4X6W0 as seed ortholog is 100%.

Group of orthologs #618. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:26 P.chabaudi:71

Q756P9              	100.00%		Q4XPZ0              	100.00%
Bootstrap support for Q756P9 as seed ortholog is 87%.
Bootstrap support for Q4XPZ0 as seed ortholog is 100%.

Group of orthologs #619. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.chabaudi:71

Q753N4              	100.00%		Q4XWB6              	100.00%
Bootstrap support for Q753N4 as seed ortholog is 100%.
Bootstrap support for Q4XWB6 as seed ortholog is 100%.

Group of orthologs #620. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.chabaudi:71

Q759I0              	100.00%		Q4XYT1              	100.00%
Bootstrap support for Q759I0 as seed ortholog is 100%.
Bootstrap support for Q4XYT1 as seed ortholog is 100%.

Group of orthologs #621. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.chabaudi:71

Q75DP9              	100.00%		Q4Y455              	100.00%
Bootstrap support for Q75DP9 as seed ortholog is 100%.
Bootstrap support for Q4Y455 as seed ortholog is 100%.

Group of orthologs #622. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:70

Q755K7              	100.00%		Q4XNM0              	100.00%
                    	       		Q4Y8T5              	5.73%
Bootstrap support for Q755K7 as seed ortholog is 100%.
Bootstrap support for Q4XNM0 as seed ortholog is 100%.

Group of orthologs #623. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:70

Q75A11              	100.00%		Q4XQM1              	100.00%
Bootstrap support for Q75A11 as seed ortholog is 100%.
Bootstrap support for Q4XQM1 as seed ortholog is 100%.

Group of orthologs #624. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:70

Q75C08              	100.00%		Q4XTM7              	100.00%
Bootstrap support for Q75C08 as seed ortholog is 100%.
Bootstrap support for Q4XTM7 as seed ortholog is 100%.

Group of orthologs #625. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:70

Q75BQ0              	100.00%		Q4XWQ4              	100.00%
Bootstrap support for Q75BQ0 as seed ortholog is 100%.
Bootstrap support for Q4XWQ4 as seed ortholog is 100%.

Group of orthologs #626. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.chabaudi:70

Q750Q2              	100.00%		Q4Y6D3              	100.00%
Bootstrap support for Q750Q2 as seed ortholog is 100%.
Bootstrap support for Q4Y6D3 as seed ortholog is 100%.

Group of orthologs #627. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:13 P.chabaudi:70

Q75DM8              	100.00%		Q4Y0C9              	100.00%
Bootstrap support for Q75DM8 as seed ortholog is 51%.
Alternative seed ortholog is Q759H2 (13 bits away from this cluster)
Bootstrap support for Q4Y0C9 as seed ortholog is 100%.

Group of orthologs #628. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.chabaudi:69

Q74ZC7              	100.00%		Q4XLE8              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for Q4XLE8 as seed ortholog is 100%.

Group of orthologs #629. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.chabaudi:68

Q756E6              	100.00%		Q4X9A1              	100.00%
Bootstrap support for Q756E6 as seed ortholog is 100%.
Bootstrap support for Q4X9A1 as seed ortholog is 100%.

Group of orthologs #630. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.chabaudi:68

Q75B93              	100.00%		Q4X5C5              	100.00%
Bootstrap support for Q75B93 as seed ortholog is 100%.
Bootstrap support for Q4X5C5 as seed ortholog is 100%.

Group of orthologs #631. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:10 P.chabaudi:68

Q750H1              	100.00%		Q4Y6E0              	100.00%
Bootstrap support for Q750H1 as seed ortholog is 59%.
Alternative seed ortholog is Q750R0 (10 bits away from this cluster)
Bootstrap support for Q4Y6E0 as seed ortholog is 100%.

Group of orthologs #632. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:67

Q754Y4              	100.00%		Q4XFB1              	100.00%
                    	       		Q4XWQ6              	74.56%
Bootstrap support for Q754Y4 as seed ortholog is 100%.
Bootstrap support for Q4XFB1 as seed ortholog is 100%.

Group of orthologs #633. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:67

Q75D20              	100.00%		Q4XG19              	100.00%
                    	       		Q4Y316              	92.89%
Bootstrap support for Q75D20 as seed ortholog is 100%.
Bootstrap support for Q4XG19 as seed ortholog is 100%.

Group of orthologs #634. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:67

Q753C0              	100.00%		Q4XYN9              	100.00%
Q75DU1              	13.61%		
Bootstrap support for Q753C0 as seed ortholog is 100%.
Bootstrap support for Q4XYN9 as seed ortholog is 100%.

Group of orthologs #635. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:15 P.chabaudi:67

Q74ZH5              	100.00%		Q4X5G5              	100.00%
Bootstrap support for Q74ZH5 as seed ortholog is 80%.
Bootstrap support for Q4X5G5 as seed ortholog is 100%.

Group of orthologs #636. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:67

Q75EA2              	100.00%		Q4Y2N2              	100.00%
Bootstrap support for Q75EA2 as seed ortholog is 100%.
Bootstrap support for Q4Y2N2 as seed ortholog is 100%.

Group of orthologs #637. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.chabaudi:67

Q75E33              	100.00%		Q4Y478              	100.00%
Bootstrap support for Q75E33 as seed ortholog is 100%.
Bootstrap support for Q4Y478 as seed ortholog is 100%.

Group of orthologs #638. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.chabaudi:66

Q75B78              	100.00%		Q4XLZ7              	100.00%
Q75F49              	5.01%		
Bootstrap support for Q75B78 as seed ortholog is 100%.
Bootstrap support for Q4XLZ7 as seed ortholog is 100%.

Group of orthologs #639. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.chabaudi:66

Q752T0              	100.00%		Q4XWE4              	100.00%
                    	       		Q4XEZ6              	45.21%
Bootstrap support for Q752T0 as seed ortholog is 100%.
Bootstrap support for Q4XWE4 as seed ortholog is 100%.

Group of orthologs #640. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.chabaudi:12

Q75BS2              	100.00%		Q4XZ53              	100.00%
Q754Y8              	9.39%		
Bootstrap support for Q75BS2 as seed ortholog is 100%.
Bootstrap support for Q4XZ53 as seed ortholog is 66%.
Alternative seed ortholog is Q4XMR9 (12 bits away from this cluster)

Group of orthologs #641. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.chabaudi:66

Q75EQ7              	100.00%		Q4XDE2              	100.00%
Bootstrap support for Q75EQ7 as seed ortholog is 100%.
Bootstrap support for Q4XDE2 as seed ortholog is 100%.

Group of orthologs #642. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:65

Q757J7              	100.00%		Q4X393              	100.00%
Bootstrap support for Q757J7 as seed ortholog is 100%.
Bootstrap support for Q4X393 as seed ortholog is 100%.

Group of orthologs #643. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:65

Q74Z75              	100.00%		Q4XM41              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for Q4XM41 as seed ortholog is 100%.

Group of orthologs #644. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:65

Q75EY1              	100.00%		Q4XMZ5              	100.00%
Bootstrap support for Q75EY1 as seed ortholog is 100%.
Bootstrap support for Q4XMZ5 as seed ortholog is 100%.

Group of orthologs #645. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:65

Q757S0              	100.00%		Q4XVQ0              	100.00%
Bootstrap support for Q757S0 as seed ortholog is 100%.
Bootstrap support for Q4XVQ0 as seed ortholog is 100%.

Group of orthologs #646. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:65

Q752I3              	100.00%		Q4Y5F0              	100.00%
Bootstrap support for Q752I3 as seed ortholog is 100%.
Bootstrap support for Q4Y5F0 as seed ortholog is 100%.

Group of orthologs #647. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.chabaudi:65

Q75DZ3              	100.00%		Q4XX60              	100.00%
Bootstrap support for Q75DZ3 as seed ortholog is 100%.
Bootstrap support for Q4XX60 as seed ortholog is 100%.

Group of orthologs #648. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:15 P.chabaudi:65

Q75F52              	100.00%		Q4Y5Z2              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 69%.
Alternative seed ortholog is Q75B67 (15 bits away from this cluster)
Bootstrap support for Q4Y5Z2 as seed ortholog is 100%.

Group of orthologs #649. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:64

Q758V1              	100.00%		Q4X2H4              	100.00%
Bootstrap support for Q758V1 as seed ortholog is 100%.
Bootstrap support for Q4X2H4 as seed ortholog is 100%.

Group of orthologs #650. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:64

Q75A53              	100.00%		Q4X6L9              	100.00%
Bootstrap support for Q75A53 as seed ortholog is 100%.
Bootstrap support for Q4X6L9 as seed ortholog is 100%.

Group of orthologs #651. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:3 P.chabaudi:64

Q75BJ4              	100.00%		Q4XN44              	100.00%
Bootstrap support for Q75BJ4 as seed ortholog is 48%.
Alternative seed ortholog is Q75DZ1 (3 bits away from this cluster)
Bootstrap support for Q4XN44 as seed ortholog is 100%.

Group of orthologs #652. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:64

Q758M9              	100.00%		Q4XUC2              	100.00%
Bootstrap support for Q758M9 as seed ortholog is 100%.
Bootstrap support for Q4XUC2 as seed ortholog is 100%.

Group of orthologs #653. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:64

Q752U9              	100.00%		Q4Y793              	100.00%
Bootstrap support for Q752U9 as seed ortholog is 100%.
Bootstrap support for Q4Y793 as seed ortholog is 100%.

Group of orthologs #654. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.chabaudi:64

Q757H2              	100.00%		Q4Y5E1              	100.00%
Bootstrap support for Q757H2 as seed ortholog is 100%.
Bootstrap support for Q4Y5E1 as seed ortholog is 100%.

Group of orthologs #655. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.chabaudi:63

Q75DS4              	100.00%		Q4XEF0              	100.00%
Bootstrap support for Q75DS4 as seed ortholog is 100%.
Bootstrap support for Q4XEF0 as seed ortholog is 100%.

Group of orthologs #656. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.chabaudi:63

Q75BB8              	100.00%		Q4Y1N0              	100.00%
Bootstrap support for Q75BB8 as seed ortholog is 100%.
Bootstrap support for Q4Y1N0 as seed ortholog is 100%.

Group of orthologs #657. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.chabaudi:62

Q754S6              	100.00%		Q4XYN2              	100.00%
Q756K7              	6.22%		Q4X802              	48.09%
Bootstrap support for Q754S6 as seed ortholog is 100%.
Bootstrap support for Q4XYN2 as seed ortholog is 100%.

Group of orthologs #658. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.chabaudi:62

Q75AV7              	100.00%		Q4XM95              	100.00%
Bootstrap support for Q75AV7 as seed ortholog is 100%.
Bootstrap support for Q4XM95 as seed ortholog is 100%.

Group of orthologs #659. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q75AX5              	100.00%		Q4XEU0              	100.00%
Q751J1              	25.88%		Q4Y7Y2              	54.33%
Bootstrap support for Q75AX5 as seed ortholog is 100%.
Bootstrap support for Q4XEU0 as seed ortholog is 100%.

Group of orthologs #660. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.chabaudi:61

Q752R2              	100.00%		Q4XEY7              	100.00%
                    	       		Q4XVW3              	57.94%
Bootstrap support for Q752R2 as seed ortholog is 56%.
Alternative seed ortholog is Q754L9 (5 bits away from this cluster)
Bootstrap support for Q4XEY7 as seed ortholog is 100%.

Group of orthologs #661. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q755W8              	100.00%		Q4XF28              	100.00%
                    	       		Q4Y0Q2              	52.14%
Bootstrap support for Q755W8 as seed ortholog is 100%.
Bootstrap support for Q4XF28 as seed ortholog is 100%.

Group of orthologs #662. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q75AS4              	100.00%		Q4XYR3              	100.00%
                    	       		Q4X9S3              	58.55%
Bootstrap support for Q75AS4 as seed ortholog is 100%.
Bootstrap support for Q4XYR3 as seed ortholog is 100%.

Group of orthologs #663. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q74Z43              	100.00%		Q4XLI9              	100.00%
Bootstrap support for Q74Z43 as seed ortholog is 100%.
Bootstrap support for Q4XLI9 as seed ortholog is 100%.

Group of orthologs #664. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q75AD1              	100.00%		Q4XNY0              	100.00%
Bootstrap support for Q75AD1 as seed ortholog is 100%.
Bootstrap support for Q4XNY0 as seed ortholog is 100%.

Group of orthologs #665. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q75AP0              	100.00%		Q4XQ84              	100.00%
Bootstrap support for Q75AP0 as seed ortholog is 100%.
Bootstrap support for Q4XQ84 as seed ortholog is 100%.

Group of orthologs #666. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.chabaudi:61

Q754B8              	100.00%		Q4Y0P5              	100.00%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for Q4Y0P5 as seed ortholog is 100%.

Group of orthologs #667. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.chabaudi:60

Q74ZB2              	100.00%		Q4X5C0              	100.00%
Bootstrap support for Q74ZB2 as seed ortholog is 100%.
Bootstrap support for Q4X5C0 as seed ortholog is 100%.

Group of orthologs #668. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.chabaudi:60

Q75CC7              	100.00%		Q4XC32              	100.00%
Bootstrap support for Q75CC7 as seed ortholog is 100%.
Bootstrap support for Q4XC32 as seed ortholog is 100%.

Group of orthologs #669. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.chabaudi:60

Q75AF9              	100.00%		Q4XN74              	100.00%
Bootstrap support for Q75AF9 as seed ortholog is 100%.
Bootstrap support for Q4XN74 as seed ortholog is 100%.

Group of orthologs #670. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.chabaudi:60

Q758Y2              	100.00%		Q4XQJ4              	100.00%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for Q4XQJ4 as seed ortholog is 100%.

Group of orthologs #671. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.chabaudi:59

Q753Q5              	100.00%		Q4XI97              	100.00%
                    	       		Q4XZF2              	100.00%
Bootstrap support for Q753Q5 as seed ortholog is 100%.
Bootstrap support for Q4XI97 as seed ortholog is 100%.
Bootstrap support for Q4XZF2 as seed ortholog is 100%.

Group of orthologs #672. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.chabaudi:59

Q75B89              	100.00%		Q4XS34              	100.00%
Bootstrap support for Q75B89 as seed ortholog is 100%.
Bootstrap support for Q4XS34 as seed ortholog is 100%.

Group of orthologs #673. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:11 P.chabaudi:59

Q757M4              	100.00%		Q4XZN5              	100.00%
Bootstrap support for Q757M4 as seed ortholog is 50%.
Alternative seed ortholog is Q74ZS6 (11 bits away from this cluster)
Bootstrap support for Q4XZN5 as seed ortholog is 100%.

Group of orthologs #674. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.chabaudi:59

Q759P0              	100.00%		Q4XYE9              	100.00%
Bootstrap support for Q759P0 as seed ortholog is 100%.
Bootstrap support for Q4XYE9 as seed ortholog is 100%.

Group of orthologs #675. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.chabaudi:59

Q75AT0              	100.00%		Q4Y3H9              	100.00%
Bootstrap support for Q75AT0 as seed ortholog is 100%.
Bootstrap support for Q4Y3H9 as seed ortholog is 100%.

Group of orthologs #676. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.chabaudi:58

Q74ZP1              	100.00%		Q4XBH3              	100.00%
Bootstrap support for Q74ZP1 as seed ortholog is 100%.
Bootstrap support for Q4XBH3 as seed ortholog is 100%.

Group of orthologs #677. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.chabaudi:58

Q75C25              	100.00%		Q4XV39              	100.00%
Bootstrap support for Q75C25 as seed ortholog is 100%.
Bootstrap support for Q4XV39 as seed ortholog is 100%.

Group of orthologs #678. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.chabaudi:58

Q75E69              	100.00%		Q4Y4J3              	100.00%
Bootstrap support for Q75E69 as seed ortholog is 100%.
Bootstrap support for Q4Y4J3 as seed ortholog is 100%.

Group of orthologs #679. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.chabaudi:57

Q751A6              	100.00%		Q4Y3C1              	100.00%
Bootstrap support for Q751A6 as seed ortholog is 100%.
Bootstrap support for Q4Y3C1 as seed ortholog is 100%.

Group of orthologs #680. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.chabaudi:16

Q75AR2              	100.00%		Q4Y0L6              	100.00%
Bootstrap support for Q75AR2 as seed ortholog is 100%.
Bootstrap support for Q4Y0L6 as seed ortholog is 75%.

Group of orthologs #681. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q750Y9              	100.00%		Q4XPG6              	100.00%
Bootstrap support for Q750Y9 as seed ortholog is 100%.
Bootstrap support for Q4XPG6 as seed ortholog is 100%.

Group of orthologs #682. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q755T6              	100.00%		Q4XPK8              	100.00%
Bootstrap support for Q755T6 as seed ortholog is 100%.
Bootstrap support for Q4XPK8 as seed ortholog is 100%.

Group of orthologs #683. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q754N3              	100.00%		Q4XVC2              	100.00%
Bootstrap support for Q754N3 as seed ortholog is 100%.
Bootstrap support for Q4XVC2 as seed ortholog is 100%.

Group of orthologs #684. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q75DL3              	100.00%		Q4XW81              	100.00%
Bootstrap support for Q75DL3 as seed ortholog is 100%.
Bootstrap support for Q4XW81 as seed ortholog is 100%.

Group of orthologs #685. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q750D9              	100.00%		Q4Y7B6              	100.00%
Bootstrap support for Q750D9 as seed ortholog is 100%.
Bootstrap support for Q4Y7B6 as seed ortholog is 100%.

Group of orthologs #686. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q75AB5              	100.00%		Q4Y198              	100.00%
Bootstrap support for Q75AB5 as seed ortholog is 100%.
Bootstrap support for Q4Y198 as seed ortholog is 100%.

Group of orthologs #687. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.chabaudi:56

Q75EI7              	100.00%		Q4Y0R7              	100.00%
Bootstrap support for Q75EI7 as seed ortholog is 100%.
Bootstrap support for Q4Y0R7 as seed ortholog is 100%.

Group of orthologs #688. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.chabaudi:55

Q755B3              	100.00%		Q4X293              	100.00%
Bootstrap support for Q755B3 as seed ortholog is 100%.
Bootstrap support for Q4X293 as seed ortholog is 100%.

Group of orthologs #689. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.chabaudi:54

Q759T8              	100.00%		Q4XAX6              	100.00%
                    	       		Q4Y856              	97.06%
Bootstrap support for Q759T8 as seed ortholog is 100%.
Bootstrap support for Q4XAX6 as seed ortholog is 100%.

Group of orthologs #690. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.chabaudi:54

Q75AP5              	100.00%		Q4Y8Z0              	100.00%
Bootstrap support for Q75AP5 as seed ortholog is 100%.
Bootstrap support for Q4Y8Z0 as seed ortholog is 100%.

Group of orthologs #691. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.chabaudi:53

Q759W7              	100.00%		Q4XF82              	100.00%
Bootstrap support for Q759W7 as seed ortholog is 100%.
Bootstrap support for Q4XF82 as seed ortholog is 100%.

Group of orthologs #692. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.chabaudi:52

Q752L3              	100.00%		Q4X6A5              	100.00%
Q755Z4              	6.67%		
Q75CX6              	6.02%		
Q75CX5              	5.38%		
Q75DB1              	5.16%		
Bootstrap support for Q752L3 as seed ortholog is 100%.
Bootstrap support for Q4X6A5 as seed ortholog is 100%.

Group of orthologs #693. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.chabaudi:52

Q75DN1              	100.00%		Q4XUJ1              	100.00%
Bootstrap support for Q75DN1 as seed ortholog is 100%.
Bootstrap support for Q4XUJ1 as seed ortholog is 100%.

Group of orthologs #694. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.chabaudi:51

Q759N5              	100.00%		Q4X6L0              	100.00%
                    	       		Q4Y0H6              	49.71%
Bootstrap support for Q759N5 as seed ortholog is 100%.
Bootstrap support for Q4X6L0 as seed ortholog is 100%.

Group of orthologs #695. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.chabaudi:51

Q752I9              	100.00%		Q4XEN8              	100.00%
Q752F2              	45.74%		
Bootstrap support for Q752I9 as seed ortholog is 100%.
Bootstrap support for Q4XEN8 as seed ortholog is 100%.

Group of orthologs #696. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.chabaudi:51

Q75AC1              	100.00%		Q4XAW3              	100.00%
Bootstrap support for Q75AC1 as seed ortholog is 100%.
Bootstrap support for Q4XAW3 as seed ortholog is 100%.

Group of orthologs #697. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.chabaudi:51

Q75CZ8              	100.00%		Q4XVC3              	100.00%
Bootstrap support for Q75CZ8 as seed ortholog is 100%.
Bootstrap support for Q4XVC3 as seed ortholog is 100%.

Group of orthologs #698. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.chabaudi:51

Q75BA0              	100.00%		Q4Y1W6              	100.00%
Bootstrap support for Q75BA0 as seed ortholog is 100%.
Bootstrap support for Q4Y1W6 as seed ortholog is 100%.

Group of orthologs #699. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.chabaudi:50

Q75BR7              	100.00%		Q4XTG6              	100.00%
Bootstrap support for Q75BR7 as seed ortholog is 100%.
Bootstrap support for Q4XTG6 as seed ortholog is 100%.

Group of orthologs #700. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.chabaudi:49

Q75C67              	100.00%		Q4Y116              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 100%.
Bootstrap support for Q4Y116 as seed ortholog is 100%.

Group of orthologs #701. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.chabaudi:49

Q75CR5              	100.00%		Q4Y353              	100.00%
Bootstrap support for Q75CR5 as seed ortholog is 100%.
Bootstrap support for Q4Y353 as seed ortholog is 100%.

Group of orthologs #702. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.chabaudi:49

Q75BU8              	100.00%		Q4Y6U9              	100.00%
Bootstrap support for Q75BU8 as seed ortholog is 100%.
Bootstrap support for Q4Y6U9 as seed ortholog is 100%.

Group of orthologs #703. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.chabaudi:1

Q759L2              	100.00%		Q4XEL1              	100.00%
Bootstrap support for Q759L2 as seed ortholog is 100%.
Bootstrap support for Q4XEL1 as seed ortholog is 51%.
Alternative seed ortholog is Q4XWG1 (1 bits away from this cluster)

Group of orthologs #704. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.chabaudi:47

Q75AX7              	100.00%		Q4XQB3              	100.00%
Bootstrap support for Q75AX7 as seed ortholog is 100%.
Bootstrap support for Q4XQB3 as seed ortholog is 100%.

Group of orthologs #705. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.chabaudi:47

Q754P6              	100.00%		Q4XWX5              	100.00%
Bootstrap support for Q754P6 as seed ortholog is 100%.
Bootstrap support for Q4XWX5 as seed ortholog is 100%.

Group of orthologs #706. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.chabaudi:46

Q759U0              	100.00%		Q4Y4T7              	100.00%
                    	       		Q4Y4C1              	14.12%
Bootstrap support for Q759U0 as seed ortholog is 100%.
Bootstrap support for Q4Y4T7 as seed ortholog is 100%.

Group of orthologs #707. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.chabaudi:46

Q75BV5              	100.00%		Q4XLD9              	100.00%
Bootstrap support for Q75BV5 as seed ortholog is 100%.
Bootstrap support for Q4XLD9 as seed ortholog is 100%.

Group of orthologs #708. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.chabaudi:45

Q74ZB8              	100.00%		Q4XH02              	100.00%
Bootstrap support for Q74ZB8 as seed ortholog is 100%.
Bootstrap support for Q4XH02 as seed ortholog is 100%.

Group of orthologs #709. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.chabaudi:45

Q754L3              	100.00%		Q4XYA2              	100.00%
Bootstrap support for Q754L3 as seed ortholog is 100%.
Bootstrap support for Q4XYA2 as seed ortholog is 100%.

Group of orthologs #710. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.chabaudi:45

Q758S3              	100.00%		Q4Y8S3              	100.00%
Bootstrap support for Q758S3 as seed ortholog is 100%.
Bootstrap support for Q4Y8S3 as seed ortholog is 100%.

Group of orthologs #711. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.chabaudi:44

Q75BU2              	100.00%		Q4XSD1              	100.00%
                    	       		Q4XGZ3              	70.38%
Bootstrap support for Q75BU2 as seed ortholog is 100%.
Bootstrap support for Q4XSD1 as seed ortholog is 100%.

Group of orthologs #712. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.chabaudi:44

Q75AN5              	100.00%		Q4Y5F1              	100.00%
Bootstrap support for Q75AN5 as seed ortholog is 100%.
Bootstrap support for Q4Y5F1 as seed ortholog is 100%.

Group of orthologs #713. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.chabaudi:44

Q75DS2              	100.00%		Q4Y8Z4              	100.00%
Bootstrap support for Q75DS2 as seed ortholog is 100%.
Bootstrap support for Q4Y8Z4 as seed ortholog is 100%.

Group of orthologs #714. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.chabaudi:42

Q754L8              	100.00%		Q4XX52              	100.00%
Bootstrap support for Q754L8 as seed ortholog is 100%.
Bootstrap support for Q4XX52 as seed ortholog is 100%.

Group of orthologs #715. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.chabaudi:41

Q75F39              	100.00%		Q4XMY5              	100.00%
                    	       		Q4Y1G4              	9.04%
Bootstrap support for Q75F39 as seed ortholog is 100%.
Bootstrap support for Q4XMY5 as seed ortholog is 100%.