###################################
286 groups of orthologs
345 in-paralogs from A.gossypii
315 in-paralogs from M.jannaschii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 690 bits
Score difference with first non-orthologous sequence - A.gossypii:189 M.jannaschii:638

Q754B2              	100.00%		Q58556              	100.00%
Bootstrap support for Q754B2 as seed ortholog is 99%.
Bootstrap support for Q58556 as seed ortholog is 100%.

Group of orthologs #2. Best score 643 bits
Score difference with first non-orthologous sequence - A.gossypii:229 M.jannaschii:643

Q756K2              	100.00%		Q58445              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 99%.
Bootstrap support for Q58445 as seed ortholog is 100%.

Group of orthologs #3. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:471 M.jannaschii:587

Q9UVJ8              	100.00%		Q57670              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for Q57670 as seed ortholog is 100%.

Group of orthologs #4. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:250 M.jannaschii:551

Q750N5              	100.00%		Q58623              	100.00%
Bootstrap support for Q750N5 as seed ortholog is 100%.
Bootstrap support for Q58623 as seed ortholog is 100%.

Group of orthologs #5. Best score 544 bits
Score difference with first non-orthologous sequence - A.gossypii:409 M.jannaschii:544

Q74ZS3              	100.00%		Q58129              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for Q58129 as seed ortholog is 100%.

Group of orthologs #6. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:246 M.jannaschii:542

Q755X4              	100.00%		Q58357              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 99%.
Bootstrap support for Q58357 as seed ortholog is 100%.

Group of orthologs #7. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:386 M.jannaschii:539

Q75BE4              	100.00%		Q57669              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for Q57669 as seed ortholog is 100%.

Group of orthologs #8. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:517 M.jannaschii:517

Q75B52              	100.00%		Q60181              	100.00%
Q753Q4              	11.18%		
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for Q60181 as seed ortholog is 100%.

Group of orthologs #9. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 M.jannaschii:493

Q751L7              	100.00%		Q58574              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for Q58574 as seed ortholog is 100%.

Group of orthologs #10. Best score 482 bits
Score difference with first non-orthologous sequence - A.gossypii:199 M.jannaschii:370

P41752              	100.00%		Q57770              	100.00%
Bootstrap support for P41752 as seed ortholog is 100%.
Bootstrap support for Q57770 as seed ortholog is 100%.

Group of orthologs #11. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:462 M.jannaschii:462

Q756H2              	100.00%		Q60173              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for Q60173 as seed ortholog is 100%.

Group of orthologs #12. Best score 461 bits
Score difference with first non-orthologous sequence - A.gossypii:461 M.jannaschii:461

Q75BD7              	100.00%		Q57681              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for Q57681 as seed ortholog is 100%.

Group of orthologs #13. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:442 M.jannaschii:442

Q74ZJ9              	100.00%		Q58536              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for Q58536 as seed ortholog is 100%.

Group of orthologs #14. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:389 M.jannaschii:431

Q752T8              	100.00%		Q60179              	100.00%
Bootstrap support for Q752T8 as seed ortholog is 100%.
Bootstrap support for Q60179 as seed ortholog is 100%.

Group of orthologs #15. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 M.jannaschii:428

Q75CN6              	100.00%		Q58672              	100.00%
Bootstrap support for Q75CN6 as seed ortholog is 100%.
Bootstrap support for Q58672 as seed ortholog is 100%.

Group of orthologs #16. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:320 M.jannaschii:286

Q758Q8              	100.00%		Q57725              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for Q57725 as seed ortholog is 100%.

Group of orthologs #17. Best score 404 bits
Score difference with first non-orthologous sequence - A.gossypii:164 M.jannaschii:404

Q754C8              	100.00%		Q58448              	100.00%
Q754P1              	6.33%		
Bootstrap support for Q754C8 as seed ortholog is 98%.
Bootstrap support for Q58448 as seed ortholog is 100%.

Group of orthologs #18. Best score 393 bits
Score difference with first non-orthologous sequence - A.gossypii:311 M.jannaschii:393

Q75F16              	100.00%		Q58050              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for Q58050 as seed ortholog is 100%.

Group of orthologs #19. Best score 390 bits
Score difference with first non-orthologous sequence - A.gossypii:274 M.jannaschii:390

Q75D48              	100.00%		Q58657              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for Q58657 as seed ortholog is 100%.

Group of orthologs #20. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:15 M.jannaschii:389

Q74Z89              	100.00%		Q58405              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 65%.
Alternative seed ortholog is Q753A6 (15 bits away from this cluster)
Bootstrap support for Q58405 as seed ortholog is 100%.

Group of orthologs #21. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:205 M.jannaschii:366

Q759A4              	100.00%		Q57710              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 100%.
Bootstrap support for Q57710 as seed ortholog is 100%.

Group of orthologs #22. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:13 M.jannaschii:223

Q757M5              	100.00%		Q58576              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 66%.
Alternative seed ortholog is Q750J4 (13 bits away from this cluster)
Bootstrap support for Q58576 as seed ortholog is 100%.

Group of orthologs #23. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:362 M.jannaschii:362

Q75D66              	100.00%		Q58776              	100.00%
Bootstrap support for Q75D66 as seed ortholog is 100%.
Bootstrap support for Q58776 as seed ortholog is 100%.

Group of orthologs #24. Best score 348 bits
Score difference with first non-orthologous sequence - A.gossypii:296 M.jannaschii:348

Q759A5              	100.00%		Q58722              	100.00%
Q75F62              	9.26%		
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for Q58722 as seed ortholog is 100%.

Group of orthologs #25. Best score 340 bits
Score difference with first non-orthologous sequence - A.gossypii:14 M.jannaschii:340

Q75FB3              	100.00%		Q59037              	100.00%
Bootstrap support for Q75FB3 as seed ortholog is 45%.
Alternative seed ortholog is Q750H4 (14 bits away from this cluster)
Bootstrap support for Q59037 as seed ortholog is 100%.

Group of orthologs #26. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:128 M.jannaschii:333

Q75EP5              	100.00%		Q58413              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 97%.
Bootstrap support for Q58413 as seed ortholog is 100%.

Group of orthologs #27. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:329 M.jannaschii:329

Q753T3              	100.00%		Q58783              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for Q58783 as seed ortholog is 100%.

Group of orthologs #28. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:312 M.jannaschii:312

Q751X2              	100.00%		Q58851              	100.00%
Bootstrap support for Q751X2 as seed ortholog is 100%.
Bootstrap support for Q58851 as seed ortholog is 100%.

Group of orthologs #29. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:312 M.jannaschii:312

Q75EN8              	100.00%		Q57565              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for Q57565 as seed ortholog is 100%.

Group of orthologs #30. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 M.jannaschii:302

Q75ED6              	100.00%		Q58628              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for Q58628 as seed ortholog is 100%.

Group of orthologs #31. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:190 M.jannaschii:300

Q75C64              	100.00%		Q60356              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 99%.
Bootstrap support for Q60356 as seed ortholog is 100%.

Group of orthologs #32. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:72 M.jannaschii:161

Q75AW1              	100.00%		Q58131              	100.00%
Bootstrap support for Q75AW1 as seed ortholog is 95%.
Bootstrap support for Q58131 as seed ortholog is 99%.

Group of orthologs #33. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 M.jannaschii:298

Q75B59              	100.00%		Q58575              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for Q58575 as seed ortholog is 100%.

Group of orthologs #34. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:297 M.jannaschii:297

Q75DA2              	100.00%		Q58090              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for Q58090 as seed ortholog is 100%.

Group of orthologs #35. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:169 M.jannaschii:287

Q75D13              	100.00%		Q58475              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 99%.
Bootstrap support for Q58475 as seed ortholog is 100%.

Group of orthologs #36. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:280 M.jannaschii:280

Q750W4              	100.00%		Q57658              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for Q57658 as seed ortholog is 100%.

Group of orthologs #37. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 M.jannaschii:279

Q756B7              	100.00%		Q58531              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for Q58531 as seed ortholog is 100%.

Group of orthologs #38. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 M.jannaschii:279

Q758R9              	100.00%		Q58530              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for Q58530 as seed ortholog is 100%.

Group of orthologs #39. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 M.jannaschii:276

Q751N1              	100.00%		Q57657              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for Q57657 as seed ortholog is 100%.

Group of orthologs #40. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:130 M.jannaschii:275

Q74Z74              	100.00%		Q58659              	100.00%
Bootstrap support for Q74Z74 as seed ortholog is 99%.
Bootstrap support for Q58659 as seed ortholog is 100%.

Group of orthologs #41. Best score 275 bits
Score difference with first non-orthologous sequence - A.gossypii:71 M.jannaschii:275

Q75AF7              	100.00%		Q58950              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 94%.
Bootstrap support for Q58950 as seed ortholog is 100%.

Group of orthologs #42. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 M.jannaschii:270

Q75EW4              	100.00%		Q58224              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for Q58224 as seed ortholog is 100%.

Group of orthologs #43. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 M.jannaschii:269

Q757L9              	100.00%		Q58201              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for Q58201 as seed ortholog is 100%.

Group of orthologs #44. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:267 M.jannaschii:267

Q75EU2              	100.00%		Q57612              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for Q57612 as seed ortholog is 100%.

Group of orthologs #45. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:173 M.jannaschii:265

Q757N3              	100.00%		Q58635              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for Q58635 as seed ortholog is 100%.

Group of orthologs #46. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:156 M.jannaschii:171

Q752Q7              	100.00%		Q57911              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 99%.
Bootstrap support for Q57911 as seed ortholog is 99%.

Group of orthologs #47. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 M.jannaschii:259

Q75BQ2              	100.00%		Q58508              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for Q58508 as seed ortholog is 100%.

Group of orthologs #48. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:258 M.jannaschii:258

Q75CL7              	100.00%		Q57568              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for Q57568 as seed ortholog is 100%.

Group of orthologs #49. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:182 M.jannaschii:258

Q75CQ5              	100.00%		Q58728              	100.00%
Bootstrap support for Q75CQ5 as seed ortholog is 100%.
Bootstrap support for Q58728 as seed ortholog is 100%.

Group of orthologs #50. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 M.jannaschii:255

Q756M4              	100.00%		Q60174              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for Q60174 as seed ortholog is 100%.

Group of orthologs #51. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:151 M.jannaschii:253

Q75DB0              	100.00%		Q58374              	100.00%
Bootstrap support for Q75DB0 as seed ortholog is 99%.
Bootstrap support for Q58374 as seed ortholog is 100%.

Group of orthologs #52. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 M.jannaschii:252

Q75AE3              	100.00%		Q58884              	100.00%
Q75A77              	7.25%		Q58371              	21.61%
Q74ZC3              	6.31%		Q57809              	16.58%
Q752M8              	5.37%		Q60275              	5.13%
Bootstrap support for Q75AE3 as seed ortholog is 100%.
Bootstrap support for Q58884 as seed ortholog is 100%.

Group of orthologs #53. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:14 M.jannaschii:247

Q755W0              	100.00%		Q58083              	100.00%
Q75BL8              	100.00%		
Q75BS4              	8.17%		
Bootstrap support for Q755W0 as seed ortholog is 63%.
Alternative seed ortholog is Q755N4 (14 bits away from this cluster)
Bootstrap support for Q75BL8 as seed ortholog is 36%.
Alternative seed ortholog is Q755N4 (14 bits away from this cluster)
Bootstrap support for Q58083 as seed ortholog is 100%.

Group of orthologs #54. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:31 M.jannaschii:247

Q75AY4              	100.00%		Q58130              	100.00%
                    	       		Q58991              	13.63%
Bootstrap support for Q75AY4 as seed ortholog is 79%.
Bootstrap support for Q58130 as seed ortholog is 100%.

Group of orthologs #55. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 M.jannaschii:175

Q74ZU7              	100.00%		Q49593              	100.00%
Q75BP5              	14.78%		
Bootstrap support for Q74ZU7 as seed ortholog is 100%.
Bootstrap support for Q49593 as seed ortholog is 100%.

Group of orthologs #56. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 M.jannaschii:243

Q759Y5              	100.00%		Q57645              	100.00%
Bootstrap support for Q759Y5 as seed ortholog is 100%.
Bootstrap support for Q57645 as seed ortholog is 100%.

Group of orthologs #57. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:241 M.jannaschii:169

Q75AC3              	100.00%		Q57731              	100.00%
Bootstrap support for Q75AC3 as seed ortholog is 100%.
Bootstrap support for Q57731 as seed ortholog is 99%.

Group of orthologs #58. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:94 M.jannaschii:240

Q757K5              	100.00%		Q58806              	100.00%
Q75CG3              	8.96%		
Q758W1              	6.82%		
Bootstrap support for Q757K5 as seed ortholog is 98%.
Bootstrap support for Q58806 as seed ortholog is 100%.

Group of orthologs #59. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 M.jannaschii:240

Q752H7              	100.00%		Q60175              	100.00%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for Q60175 as seed ortholog is 100%.

Group of orthologs #60. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:34 M.jannaschii:239

Q753P8              	100.00%		Q58772              	100.00%
Bootstrap support for Q753P8 as seed ortholog is 77%.
Bootstrap support for Q58772 as seed ortholog is 100%.

Group of orthologs #61. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 M.jannaschii:237

Q758H3              	100.00%		Q57663              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for Q57663 as seed ortholog is 100%.

Group of orthologs #62. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:84 M.jannaschii:235

Q74ZM9              	100.00%		P81291              	100.00%
Bootstrap support for Q74ZM9 as seed ortholog is 96%.
Bootstrap support for P81291 as seed ortholog is 100%.

Group of orthologs #63. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 M.jannaschii:230

Q752N9              	100.00%		Q58425              	100.00%
Bootstrap support for Q752N9 as seed ortholog is 100%.
Bootstrap support for Q58425 as seed ortholog is 100%.

Group of orthologs #64. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:63 M.jannaschii:228

Q75DX9              	100.00%		Q58409              	100.00%
Bootstrap support for Q75DX9 as seed ortholog is 88%.
Bootstrap support for Q58409 as seed ortholog is 100%.

Group of orthologs #65. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:150 M.jannaschii:227

Q75F08              	100.00%		Q58969              	100.00%
Bootstrap support for Q75F08 as seed ortholog is 99%.
Bootstrap support for Q58969 as seed ortholog is 100%.

Group of orthologs #66. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 M.jannaschii:225

Q750E0              	100.00%		Q60178              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for Q60178 as seed ortholog is 100%.

Group of orthologs #67. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 M.jannaschii:149

Q754H4              	100.00%		Q58291              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for Q58291 as seed ortholog is 100%.

Group of orthologs #68. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 M.jannaschii:223

Q754D6              	100.00%		Q58643              	100.00%
Bootstrap support for Q754D6 as seed ortholog is 100%.
Bootstrap support for Q58643 as seed ortholog is 100%.

Group of orthologs #69. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:102 M.jannaschii:222

Q75A20              	100.00%		Q58595              	100.00%
                    	       		Q58787              	36.21%
                    	       		Q57926              	19.97%
Bootstrap support for Q75A20 as seed ortholog is 99%.
Bootstrap support for Q58595 as seed ortholog is 100%.

Group of orthologs #70. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 M.jannaschii:222

Q75AL3              	100.00%		Q57991              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for Q57991 as seed ortholog is 100%.

Group of orthologs #71. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 M.jannaschii:221

Q759B4              	100.00%		Q57984              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for Q57984 as seed ortholog is 100%.

Group of orthologs #72. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 M.jannaschii:218

Q757I5              	100.00%		Q58239              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for Q58239 as seed ortholog is 100%.

Group of orthologs #73. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 M.jannaschii:217

Q759R7              	100.00%		P54014              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for P54014 as seed ortholog is 100%.

Group of orthologs #74. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 M.jannaschii:217

Q757Q0              	100.00%		Q58058              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for Q58058 as seed ortholog is 100%.

Group of orthologs #75. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:131 M.jannaschii:217

Q75AP7              	100.00%		P54017              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 99%.
Bootstrap support for P54017 as seed ortholog is 100%.

Group of orthologs #76. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:59 M.jannaschii:212

Q75CF2              	100.00%		Q58424              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 96%.
Bootstrap support for Q58424 as seed ortholog is 100%.

Group of orthologs #77. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 M.jannaschii:210

Q759A9              	100.00%		Q57572              	100.00%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for Q57572 as seed ortholog is 100%.

Group of orthologs #78. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 M.jannaschii:207

Q75CS4              	100.00%		Q57635              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for Q57635 as seed ortholog is 100%.

Group of orthologs #79. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 M.jannaschii:204

Q755K6              	100.00%		Q58295              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for Q58295 as seed ortholog is 100%.

Group of orthologs #80. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 M.jannaschii:203

Q74ZC0              	100.00%		Q58633              	100.00%
                    	       		Q57626              	8.91%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for Q58633 as seed ortholog is 100%.

Group of orthologs #81. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 M.jannaschii:203

Q75D84              	100.00%		Q58560              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for Q58560 as seed ortholog is 100%.

Group of orthologs #82. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 M.jannaschii:94

Q751Q9              	100.00%		Q57624              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for Q57624 as seed ortholog is 97%.

Group of orthologs #83. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:16 M.jannaschii:200

Q753J4              	100.00%		Q60177              	100.00%
Bootstrap support for Q753J4 as seed ortholog is 70%.
Alternative seed ortholog is Q756H0 (16 bits away from this cluster)
Bootstrap support for Q60177 as seed ortholog is 100%.

Group of orthologs #84. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 M.jannaschii:197

Q753I4              	100.00%		Q58105              	100.00%
Q75CR3              	24.61%		
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for Q58105 as seed ortholog is 100%.

Group of orthologs #85. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 M.jannaschii:196

Q754W3              	100.00%		Q57854              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for Q57854 as seed ortholog is 100%.

Group of orthologs #86. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:149 M.jannaschii:189

Q75F76              	100.00%		Q57834              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 99%.
Bootstrap support for Q57834 as seed ortholog is 100%.

Group of orthologs #87. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 M.jannaschii:187

Q75D52              	100.00%		P54063              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for P54063 as seed ortholog is 100%.

Group of orthologs #88. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 M.jannaschii:185

Q75BA7              	100.00%		Q57761              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for Q57761 as seed ortholog is 100%.

Group of orthologs #89. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 M.jannaschii:184

Q75DS8              	100.00%		Q58839              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for Q58839 as seed ortholog is 100%.

Group of orthologs #90. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 M.jannaschii:181

Q754E7              	100.00%		Q58670              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for Q58670 as seed ortholog is 100%.

Group of orthologs #91. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 M.jannaschii:181

Q759J2              	100.00%		Q58542              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for Q58542 as seed ortholog is 100%.

Group of orthologs #92. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:129 M.jannaschii:179

Q75A13              	100.00%		Q58810              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 99%.
Bootstrap support for Q58810 as seed ortholog is 100%.

Group of orthologs #93. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 M.jannaschii:178

Q75E56              	100.00%		Q57981              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for Q57981 as seed ortholog is 100%.

Group of orthologs #94. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 M.jannaschii:177

Q75BQ6              	100.00%		Q58992              	100.00%
Q758F0              	50.91%		
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for Q58992 as seed ortholog is 100%.

Group of orthologs #95. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 M.jannaschii:176

Q753S2              	100.00%		Q58347              	100.00%
Bootstrap support for Q753S2 as seed ortholog is 100%.
Bootstrap support for Q58347 as seed ortholog is 100%.

Group of orthologs #96. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 M.jannaschii:175

Q751B3              	100.00%		Q59046              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for Q59046 as seed ortholog is 100%.

Group of orthologs #97. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 M.jannaschii:173

Q755M0              	100.00%		Q57689              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for Q57689 as seed ortholog is 100%.

Group of orthologs #98. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:79 M.jannaschii:173

Q75AA7              	100.00%		Q58900              	100.00%
Bootstrap support for Q75AA7 as seed ortholog is 94%.
Bootstrap support for Q58900 as seed ortholog is 100%.

Group of orthologs #99. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 M.jannaschii:173

Q75CW4              	100.00%		Q58938              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for Q58938 as seed ortholog is 100%.

Group of orthologs #100. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 M.jannaschii:167

Q75EA0              	100.00%		P54045              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for P54045 as seed ortholog is 100%.

Group of orthologs #101. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 M.jannaschii:167

Q75F07              	100.00%		Q57739              	100.00%
Bootstrap support for Q75F07 as seed ortholog is 100%.
Bootstrap support for Q57739 as seed ortholog is 100%.

Group of orthologs #102. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 M.jannaschii:166

Q753V8              	100.00%		P54060              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for P54060 as seed ortholog is 100%.

Group of orthologs #103. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:114 M.jannaschii:165

Q75DM3              	100.00%		Q58339              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 99%.
Bootstrap support for Q58339 as seed ortholog is 100%.

Group of orthologs #104. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 M.jannaschii:160

Q753P1              	100.00%		Q57916              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for Q57916 as seed ortholog is 100%.

Group of orthologs #105. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:22 M.jannaschii:160

Q75DX7              	100.00%		Q58694              	100.00%
Bootstrap support for Q75DX7 as seed ortholog is 71%.
Alternative seed ortholog is Q75D79 (22 bits away from this cluster)
Bootstrap support for Q58694 as seed ortholog is 100%.

Group of orthologs #106. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 M.jannaschii:157

Q75CM8              	100.00%		Q58931              	100.00%
Bootstrap support for Q75CM8 as seed ortholog is 100%.
Bootstrap support for Q58931 as seed ortholog is 100%.

Group of orthologs #107. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:102 M.jannaschii:156

Q751I9              	100.00%		Q58725              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 99%.
Bootstrap support for Q58725 as seed ortholog is 100%.

Group of orthologs #108. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 M.jannaschii:156

Q75BT4              	100.00%		Q58406              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for Q58406 as seed ortholog is 100%.

Group of orthologs #109. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:66 M.jannaschii:48

Q753K9              	100.00%		Q58516              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 91%.
Bootstrap support for Q58516 as seed ortholog is 81%.

Group of orthologs #110. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 M.jannaschii:155

Q758S7              	100.00%		P54040              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for P54040 as seed ortholog is 100%.

Group of orthologs #111. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 M.jannaschii:154

Q75E89              	100.00%		P54015              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for P54015 as seed ortholog is 100%.

Group of orthologs #112. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 M.jannaschii:153

Q75BG3              	100.00%		P54039              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for P54039 as seed ortholog is 100%.

Group of orthologs #113. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 M.jannaschii:151

Q756L5              	100.00%		Q57686              	100.00%
Bootstrap support for Q756L5 as seed ortholog is 100%.
Bootstrap support for Q57686 as seed ortholog is 100%.

Group of orthologs #114. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 M.jannaschii:151

Q75AB1              	100.00%		Q58192              	100.00%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for Q58192 as seed ortholog is 100%.

Group of orthologs #115. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 M.jannaschii:151

Q75CQ9              	100.00%		P54109              	100.00%
Bootstrap support for Q75CQ9 as seed ortholog is 100%.
Bootstrap support for P54109 as seed ortholog is 100%.

Group of orthologs #116. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 M.jannaschii:149

Q759I8              	100.00%		Q58086              	100.00%
Q752E8              	32.12%		
Bootstrap support for Q759I8 as seed ortholog is 100%.
Bootstrap support for Q58086 as seed ortholog is 100%.

Group of orthologs #117. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 M.jannaschii:145

Q758E0              	100.00%		P54021              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for P54021 as seed ortholog is 100%.

Group of orthologs #118. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 M.jannaschii:145

Q75EH1              	100.00%		P54062              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for P54062 as seed ortholog is 100%.

Group of orthologs #119. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 M.jannaschii:144

Q755M2              	100.00%		Q58093              	100.00%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for Q58093 as seed ortholog is 100%.

Group of orthologs #120. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 M.jannaschii:143

Q75DY0              	100.00%		Q57989              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for Q57989 as seed ortholog is 100%.

Group of orthologs #121. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 M.jannaschii:76

Q755T1              	100.00%		Q58558              	100.00%
Bootstrap support for Q755T1 as seed ortholog is 100%.
Bootstrap support for Q58558 as seed ortholog is 98%.

Group of orthologs #122. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 M.jannaschii:141

Q75E36              	100.00%		Q58473              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for Q58473 as seed ortholog is 100%.

Group of orthologs #123. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 M.jannaschii:138

Q750I1              	100.00%		P54012              	100.00%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for P54012 as seed ortholog is 100%.

Group of orthologs #124. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 M.jannaschii:138

Q75DD1              	100.00%		Q58661              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for Q58661 as seed ortholog is 100%.

Group of orthologs #125. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 M.jannaschii:137

Q75AB0              	100.00%		Q58859              	100.00%
Bootstrap support for Q75AB0 as seed ortholog is 100%.
Bootstrap support for Q58859 as seed ortholog is 100%.

Group of orthologs #126. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:41 M.jannaschii:137

Q75EI1              	100.00%		Q57896              	100.00%
Bootstrap support for Q75EI1 as seed ortholog is 83%.
Bootstrap support for Q57896 as seed ortholog is 100%.

Group of orthologs #127. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:45 M.jannaschii:136

Q74Z38              	100.00%		Q58146              	100.00%
Q75CW3              	14.40%		
Bootstrap support for Q74Z38 as seed ortholog is 92%.
Bootstrap support for Q58146 as seed ortholog is 100%.

Group of orthologs #128. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 M.jannaschii:136

Q752J5              	100.00%		P54041              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for P54041 as seed ortholog is 100%.

Group of orthologs #129. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 M.jannaschii:134

Q75CP9              	100.00%		Q58989              	100.00%
Bootstrap support for Q75CP9 as seed ortholog is 100%.
Bootstrap support for Q58989 as seed ortholog is 100%.

Group of orthologs #130. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 M.jannaschii:132

Q752K1              	100.00%		Q58660              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for Q58660 as seed ortholog is 100%.

Group of orthologs #131. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 M.jannaschii:132

Q75B47              	100.00%		Q58109              	100.00%
Bootstrap support for Q75B47 as seed ortholog is 100%.
Bootstrap support for Q58109 as seed ortholog is 100%.

Group of orthologs #132. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 M.jannaschii:131

Q74Z35              	100.00%		Q58761              	100.00%
Q751A4              	55.80%		
Q759G2              	31.16%		
Bootstrap support for Q74Z35 as seed ortholog is 100%.
Bootstrap support for Q58761 as seed ortholog is 100%.

Group of orthologs #133. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 M.jannaschii:131

Q757K9              	100.00%		Q58767              	100.00%
Q75DN9              	8.63%		
Bootstrap support for Q757K9 as seed ortholog is 100%.
Bootstrap support for Q58767 as seed ortholog is 100%.

Group of orthologs #134. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 M.jannaschii:131

Q75CY7              	100.00%		Q57963              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for Q57963 as seed ortholog is 100%.

Group of orthologs #135. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:22 M.jannaschii:129

Q750C1              	100.00%		Q58771              	100.00%
Bootstrap support for Q750C1 as seed ortholog is 76%.
Bootstrap support for Q58771 as seed ortholog is 100%.

Group of orthologs #136. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 M.jannaschii:128

Q756J7              	100.00%		Q57886              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for Q57886 as seed ortholog is 100%.

Group of orthologs #137. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:73 M.jannaschii:128

Q758U5              	100.00%		P54018              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for P54018 as seed ortholog is 100%.

Group of orthologs #138. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 M.jannaschii:128

Q75DA1              	100.00%		Q59055              	100.00%
Bootstrap support for Q75DA1 as seed ortholog is 100%.
Bootstrap support for Q59055 as seed ortholog is 100%.

Group of orthologs #139. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:81 M.jannaschii:126

Q751J4              	100.00%		P54037              	100.00%
Bootstrap support for Q751J4 as seed ortholog is 99%.
Bootstrap support for P54037 as seed ortholog is 100%.

Group of orthologs #140. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 M.jannaschii:126

Q74ZR4              	100.00%		Q57930              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for Q57930 as seed ortholog is 100%.

Group of orthologs #141. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 M.jannaschii:125

Q75CJ6              	100.00%		Q58998              	100.00%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for Q58998 as seed ortholog is 100%.

Group of orthologs #142. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 M.jannaschii:124

Q75AK8              	100.00%		Q58601              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for Q58601 as seed ortholog is 100%.

Group of orthologs #143. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:29 M.jannaschii:123

Q752D9              	100.00%		Q58718              	100.00%
Bootstrap support for Q752D9 as seed ortholog is 51%.
Alternative seed ortholog is Q74ZH1 (29 bits away from this cluster)
Bootstrap support for Q58718 as seed ortholog is 100%.

Group of orthologs #144. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 M.jannaschii:122

Q74ZF8              	100.00%		Q57581              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for Q57581 as seed ortholog is 100%.

Group of orthologs #145. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 M.jannaschii:122

Q756F0              	100.00%		P54019              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 100%.
Bootstrap support for P54019 as seed ortholog is 100%.

Group of orthologs #146. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:63 M.jannaschii:121

Q758L6              	100.00%		P54020              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 99%.
Bootstrap support for P54020 as seed ortholog is 100%.

Group of orthologs #147. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 M.jannaschii:56

Q752H4              	100.00%		Q58501              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for Q58501 as seed ortholog is 93%.

Group of orthologs #148. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 M.jannaschii:120

Q750H0              	100.00%		Q59020              	100.00%
Bootstrap support for Q750H0 as seed ortholog is 100%.
Bootstrap support for Q59020 as seed ortholog is 100%.

Group of orthologs #149. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 M.jannaschii:119

Q754P8              	100.00%		Q59050              	100.00%
Bootstrap support for Q754P8 as seed ortholog is 100%.
Bootstrap support for Q59050 as seed ortholog is 100%.

Group of orthologs #150. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 M.jannaschii:119

Q75E11              	100.00%		P54034              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for P54034 as seed ortholog is 100%.

Group of orthologs #151. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 M.jannaschii:119

Q75BR1              	100.00%		Q58881              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for Q58881 as seed ortholog is 100%.

Group of orthologs #152. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:8 M.jannaschii:118

Q758S4              	100.00%		Q57586              	100.00%
Bootstrap support for Q758S4 as seed ortholog is 52%.
Alternative seed ortholog is Q754J0 (8 bits away from this cluster)
Bootstrap support for Q57586 as seed ortholog is 100%.

Group of orthologs #153. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 M.jannaschii:118

Q75B26              	100.00%		Q58365              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for Q58365 as seed ortholog is 100%.

Group of orthologs #154. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 M.jannaschii:117

Q758C2              	100.00%		Q58097              	100.00%
                    	       		Q60317              	26.25%
Bootstrap support for Q758C2 as seed ortholog is 100%.
Bootstrap support for Q58097 as seed ortholog is 100%.

Group of orthologs #155. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 M.jannaschii:117

Q74ZY3              	100.00%		Q58356              	100.00%
Bootstrap support for Q74ZY3 as seed ortholog is 100%.
Bootstrap support for Q58356 as seed ortholog is 100%.

Group of orthologs #156. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 M.jannaschii:116

Q75CF8              	100.00%		Q58597              	100.00%
Q757A8              	19.20%		
Bootstrap support for Q75CF8 as seed ortholog is 100%.
Bootstrap support for Q58597 as seed ortholog is 100%.

Group of orthologs #157. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 M.jannaschii:114

Q75C90              	100.00%		Q58435              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for Q58435 as seed ortholog is 100%.

Group of orthologs #158. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:15 M.jannaschii:112

Q752Y9              	100.00%		Q58639              	100.00%
                    	       		Q59056              	14.21%
Bootstrap support for Q752Y9 as seed ortholog is 76%.
Bootstrap support for Q58639 as seed ortholog is 100%.

Group of orthologs #159. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:43 M.jannaschii:112

Q754M4              	100.00%		Q57757              	100.00%
Bootstrap support for Q754M4 as seed ortholog is 84%.
Bootstrap support for Q57757 as seed ortholog is 100%.

Group of orthologs #160. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 M.jannaschii:112

Q75C13              	100.00%		P54044              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for P54044 as seed ortholog is 100%.

Group of orthologs #161. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 M.jannaschii:111

Q759U6              	100.00%		Q57675              	100.00%
Q759Z6              	40.52%		
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for Q57675 as seed ortholog is 100%.

Group of orthologs #162. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 M.jannaschii:111

Q75CU7              	100.00%		P54049              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for P54049 as seed ortholog is 100%.

Group of orthologs #163. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 M.jannaschii:110

Q75AE7              	100.00%		Q60357              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for Q60357 as seed ortholog is 100%.

Group of orthologs #164. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 M.jannaschii:109

Q756S5              	100.00%		P54043              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for P54043 as seed ortholog is 100%.

Group of orthologs #165. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 M.jannaschii:109

Q75B81              	100.00%		Q57697              	100.00%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for Q57697 as seed ortholog is 100%.

Group of orthologs #166. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 M.jannaschii:109

Q75CA5              	100.00%		Q58118              	100.00%
Bootstrap support for Q75CA5 as seed ortholog is 100%.
Bootstrap support for Q58118 as seed ortholog is 100%.

Group of orthologs #167. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 M.jannaschii:108

Q75B62              	100.00%		P54042              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for P54042 as seed ortholog is 100%.

Group of orthologs #168. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 M.jannaschii:108

Q75CE1              	100.00%		Q58070              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for Q58070 as seed ortholog is 100%.

Group of orthologs #169. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 M.jannaschii:107

Q754B3              	100.00%		Q58276              	100.00%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for Q58276 as seed ortholog is 100%.

Group of orthologs #170. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 M.jannaschii:107

Q75EF1              	100.00%		Q58032              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for Q58032 as seed ortholog is 100%.

Group of orthologs #171. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 M.jannaschii:106

Q759L8              	100.00%		P54024              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for P54024 as seed ortholog is 100%.

Group of orthologs #172. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 M.jannaschii:104

Q75ET7              	100.00%		Q57625              	100.00%
Bootstrap support for Q75ET7 as seed ortholog is 100%.
Bootstrap support for Q57625 as seed ortholog is 100%.

Group of orthologs #173. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 M.jannaschii:103

Q75AS8              	100.00%		P54057              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for P54057 as seed ortholog is 100%.

Group of orthologs #174. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:9 M.jannaschii:102

Q758S8              	100.00%		Q58634              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 64%.
Alternative seed ortholog is Q75F88 (9 bits away from this cluster)
Bootstrap support for Q58634 as seed ortholog is 100%.

Group of orthologs #175. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 M.jannaschii:99

Q75EJ7              	100.00%		Q60366              	100.00%
Q754N5              	28.08%		Q58739              	30.07%
Bootstrap support for Q75EJ7 as seed ortholog is 100%.
Bootstrap support for Q60366 as seed ortholog is 100%.

Group of orthologs #176. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 M.jannaschii:99

Q74ZX3              	100.00%		Q58874              	100.00%
Bootstrap support for Q74ZX3 as seed ortholog is 100%.
Bootstrap support for Q58874 as seed ortholog is 100%.

Group of orthologs #177. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:4 M.jannaschii:97

Q758K0              	100.00%		Q58270              	100.00%
Bootstrap support for Q758K0 as seed ortholog is 56%.
Alternative seed ortholog is Q757K8 (4 bits away from this cluster)
Bootstrap support for Q58270 as seed ortholog is 100%.

Group of orthologs #178. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 M.jannaschii:97

Q75A12              	100.00%		Q60364              	100.00%
Bootstrap support for Q75A12 as seed ortholog is 100%.
Bootstrap support for Q60364 as seed ortholog is 100%.

Group of orthologs #179. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 M.jannaschii:97

Q75ES9              	100.00%		Q57638              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for Q57638 as seed ortholog is 100%.

Group of orthologs #180. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 M.jannaschii:97

Q75F96              	100.00%		Q58011              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for Q58011 as seed ortholog is 100%.

Group of orthologs #181. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 M.jannaschii:94

Q75CV0              	100.00%		P54038              	100.00%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for P54038 as seed ortholog is 100%.

Group of orthologs #182. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 M.jannaschii:94

Q75DW4              	100.00%		P54036              	100.00%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for P54036 as seed ortholog is 100%.

Group of orthologs #183. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 M.jannaschii:93

Q755F1              	100.00%		Q57891              	100.00%
Bootstrap support for Q755F1 as seed ortholog is 100%.
Bootstrap support for Q57891 as seed ortholog is 100%.

Group of orthologs #184. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 M.jannaschii:93

Q75C47              	100.00%		Q58504              	100.00%
Bootstrap support for Q75C47 as seed ortholog is 100%.
Bootstrap support for Q58504 as seed ortholog is 100%.

Group of orthologs #185. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 M.jannaschii:31

Q755F6              	100.00%		Q58619              	100.00%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for Q58619 as seed ortholog is 83%.

Group of orthologs #186. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 M.jannaschii:91

Q74Z49              	100.00%		Q60331              	100.00%
Bootstrap support for Q74Z49 as seed ortholog is 100%.
Bootstrap support for Q60331 as seed ortholog is 100%.

Group of orthologs #187. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 M.jannaschii:91

Q75AA8              	100.00%		Q58827              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for Q58827 as seed ortholog is 100%.

Group of orthologs #188. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:41 M.jannaschii:90

Q756N6              	100.00%		Q58885              	100.00%
Bootstrap support for Q756N6 as seed ortholog is 82%.
Bootstrap support for Q58885 as seed ortholog is 100%.

Group of orthologs #189. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 M.jannaschii:89

Q754A0              	100.00%		Q57955              	100.00%
Q74Z12              	43.11%		
Q75BA6              	9.03%		
Bootstrap support for Q754A0 as seed ortholog is 100%.
Bootstrap support for Q57955 as seed ortholog is 100%.

Group of orthologs #190. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 M.jannaschii:89

Q757Z7              	100.00%		P54033              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for P54033 as seed ortholog is 100%.

Group of orthologs #191. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:12 M.jannaschii:89

Q75B05              	100.00%		Q57648              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 65%.
Alternative seed ortholog is Q75A87 (12 bits away from this cluster)
Bootstrap support for Q57648 as seed ortholog is 100%.

Group of orthologs #192. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 M.jannaschii:89

Q75BY4              	100.00%		Q58759              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for Q58759 as seed ortholog is 100%.

Group of orthologs #193. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 M.jannaschii:87

Q755D9              	100.00%		P54050              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for P54050 as seed ortholog is 100%.

Group of orthologs #194. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 M.jannaschii:87

Q756Y3              	100.00%		P54059              	100.00%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for P54059 as seed ortholog is 100%.

Group of orthologs #195. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:28 M.jannaschii:86

Q750E7              	100.00%		Q58216              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 76%.
Bootstrap support for Q58216 as seed ortholog is 100%.

Group of orthologs #196. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 M.jannaschii:85

Q756A4              	100.00%		Q57599              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for Q57599 as seed ortholog is 100%.

Group of orthologs #197. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 M.jannaschii:84

Q759X1              	100.00%		Q60176              	100.00%
Q759M4              	37.25%		
Q75AT4              	22.82%		
Bootstrap support for Q759X1 as seed ortholog is 100%.
Bootstrap support for Q60176 as seed ortholog is 100%.

Group of orthologs #198. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 M.jannaschii:84

Q75AZ9              	100.00%		Q57907              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for Q57907 as seed ortholog is 100%.

Group of orthologs #199. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 M.jannaschii:84

Q758I6              	100.00%		Q58741              	100.00%
Bootstrap support for Q758I6 as seed ortholog is 100%.
Bootstrap support for Q58741 as seed ortholog is 100%.

Group of orthologs #200. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 M.jannaschii:84

Q75CW2              	100.00%		Q58370              	100.00%
Bootstrap support for Q75CW2 as seed ortholog is 100%.
Bootstrap support for Q58370 as seed ortholog is 100%.

Group of orthologs #201. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 M.jannaschii:84

Q75D12              	100.00%		Q60363              	100.00%
Bootstrap support for Q75D12 as seed ortholog is 100%.
Bootstrap support for Q60363 as seed ortholog is 100%.

Group of orthologs #202. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 M.jannaschii:83

Q751L1              	100.00%		P54051              	100.00%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for P54051 as seed ortholog is 100%.

Group of orthologs #203. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 M.jannaschii:82

Q752Z9              	100.00%		Q57679              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for Q57679 as seed ortholog is 100%.

Group of orthologs #204. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:8 M.jannaschii:82

Q75E17              	100.00%		P54030              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 65%.
Alternative seed ortholog is Q75EE7 (8 bits away from this cluster)
Bootstrap support for P54030 as seed ortholog is 100%.

Group of orthologs #205. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 M.jannaschii:82

Q75DY8              	100.00%		P54066              	100.00%
Bootstrap support for Q75DY8 as seed ortholog is 100%.
Bootstrap support for P54066 as seed ortholog is 100%.

Group of orthologs #206. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 M.jannaschii:82

Q75CC4              	100.00%		Q60335              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for Q60335 as seed ortholog is 100%.

Group of orthologs #207. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 M.jannaschii:81

Q752A8              	100.00%		Q58026              	100.00%
Q752A7              	57.28%		
Q754B4              	25.40%		
Q75CQ4              	25.40%		
Q74Z84              	24.26%		
Q753U5              	23.22%		
Q750B9              	23.03%		
Q757P2              	22.45%		
Q751X7              	21.41%		
Q750B7              	21.31%		
Q750B8              	20.55%		
Q755W3              	20.27%		
Q75B49              	19.60%		
Q75EP1              	18.46%		
Q750W0              	17.51%		
Bootstrap support for Q752A8 as seed ortholog is 100%.
Bootstrap support for Q58026 as seed ortholog is 100%.

Group of orthologs #208. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:28 M.jannaschii:14

Q74ZK4              	100.00%		Q58065              	100.00%
Q752R1              	12.29%		
Bootstrap support for Q74ZK4 as seed ortholog is 79%.
Bootstrap support for Q58065 as seed ortholog is 57%.
Alternative seed ortholog is Q58053 (14 bits away from this cluster)

Group of orthologs #209. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 M.jannaschii:81

Q756B0              	100.00%		Q58609              	100.00%
Bootstrap support for Q756B0 as seed ortholog is 100%.
Bootstrap support for Q58609 as seed ortholog is 100%.

Group of orthologs #210. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 M.jannaschii:32

Q75F36              	100.00%		Q59002              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for Q59002 as seed ortholog is 79%.

Group of orthologs #211. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 M.jannaschii:80

Q754V6              	100.00%		P54047              	100.00%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for P54047 as seed ortholog is 100%.

Group of orthologs #212. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 M.jannaschii:80

Q756D2              	100.00%		Q58487              	100.00%
Bootstrap support for Q756D2 as seed ortholog is 100%.
Bootstrap support for Q58487 as seed ortholog is 100%.

Group of orthologs #213. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 M.jannaschii:79

Q756N3              	100.00%		Q58987              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for Q58987 as seed ortholog is 100%.

Group of orthologs #214. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 M.jannaschii:79

Q758L0              	100.00%		Q59000              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for Q59000 as seed ortholog is 100%.

Group of orthologs #215. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 M.jannaschii:79

Q75DI4              	100.00%		P54029              	100.00%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for P54029 as seed ortholog is 100%.

Group of orthologs #216. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:22 M.jannaschii:77

Q750C6              	100.00%		Q58548              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 79%.
Bootstrap support for Q58548 as seed ortholog is 100%.

Group of orthologs #217. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 M.jannaschii:77

Q75CR9              	100.00%		Q58450              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for Q58450 as seed ortholog is 100%.

Group of orthologs #218. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 M.jannaschii:77

Q75DV3              	100.00%		Q58997              	100.00%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for Q58997 as seed ortholog is 100%.

Group of orthologs #219. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 M.jannaschii:76

Q754S1              	100.00%		Q57664              	100.00%
                    	       		Q58455              	16.61%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for Q57664 as seed ortholog is 100%.

Group of orthologs #220. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 M.jannaschii:76

Q759V7              	100.00%		Q58944              	100.00%
Q753L0              	15.04%		
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for Q58944 as seed ortholog is 100%.

Group of orthologs #221. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 M.jannaschii:76

Q751P5              	100.00%		Q58436              	100.00%
Bootstrap support for Q751P5 as seed ortholog is 100%.
Bootstrap support for Q58436 as seed ortholog is 100%.

Group of orthologs #222. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 M.jannaschii:76

Q75F65              	100.00%		Q58018              	100.00%
Bootstrap support for Q75F65 as seed ortholog is 100%.
Bootstrap support for Q58018 as seed ortholog is 100%.

Group of orthologs #223. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 M.jannaschii:75

Q751I7              	100.00%		P54010              	100.00%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for P54010 as seed ortholog is 100%.

Group of orthologs #224. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 M.jannaschii:75

Q75CE5              	100.00%		Q58500              	100.00%
Bootstrap support for Q75CE5 as seed ortholog is 100%.
Bootstrap support for Q58500 as seed ortholog is 100%.

Group of orthologs #225. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 M.jannaschii:74

Q750X5              	100.00%		Q58338              	100.00%
Bootstrap support for Q750X5 as seed ortholog is 100%.
Bootstrap support for Q58338 as seed ortholog is 100%.

Group of orthologs #226. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 M.jannaschii:72

Q751Y7              	100.00%		P54011              	100.00%
Bootstrap support for Q751Y7 as seed ortholog is 100%.
Bootstrap support for P54011 as seed ortholog is 100%.

Group of orthologs #227. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 M.jannaschii:72

Q756A0              	100.00%		P54023              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for P54023 as seed ortholog is 100%.

Group of orthologs #228. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 M.jannaschii:71

Q74ZT4              	100.00%		Q58352              	100.00%
Q750G3              	6.42%		
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for Q58352 as seed ortholog is 100%.

Group of orthologs #229. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 M.jannaschii:71

Q756M8              	100.00%		Q57688              	100.00%
Bootstrap support for Q756M8 as seed ortholog is 100%.
Bootstrap support for Q57688 as seed ortholog is 100%.

Group of orthologs #230. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 M.jannaschii:70

Q74ZF7              	100.00%		Q57846              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for Q57846 as seed ortholog is 100%.

Group of orthologs #231. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 M.jannaschii:69

Q74ZK3              	100.00%		P54067              	100.00%
Bootstrap support for Q74ZK3 as seed ortholog is 100%.
Bootstrap support for P54067 as seed ortholog is 100%.

Group of orthologs #232. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 M.jannaschii:69

Q752U5              	100.00%		P54061              	100.00%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for P54061 as seed ortholog is 100%.

Group of orthologs #233. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 M.jannaschii:69

Q753F8              	100.00%		Q58625              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for Q58625 as seed ortholog is 100%.

Group of orthologs #234. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:15 M.jannaschii:69

Q75C67              	100.00%		Q57840              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 68%.
Alternative seed ortholog is Q753Q2 (15 bits away from this cluster)
Bootstrap support for Q57840 as seed ortholog is 100%.

Group of orthologs #235. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 M.jannaschii:68

Q74ZD8              	100.00%		P54065              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for P54065 as seed ortholog is 100%.

Group of orthologs #236. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 M.jannaschii:67

Q756I6              	100.00%		Q57887              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for Q57887 as seed ortholog is 100%.

Group of orthologs #237. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 M.jannaschii:66

Q757C6              	100.00%		Q58497              	100.00%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for Q58497 as seed ortholog is 100%.

Group of orthologs #238. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 M.jannaschii:65

Q755M8              	100.00%		Q57598              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for Q57598 as seed ortholog is 100%.

Group of orthologs #239. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 M.jannaschii:63

Q757D7              	100.00%		P54009              	100.00%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for P54009 as seed ortholog is 100%.

Group of orthologs #240. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 M.jannaschii:63

Q75BC3              	100.00%		Q58941              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for Q58941 as seed ortholog is 100%.

Group of orthologs #241. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 M.jannaschii:62

Q75D62              	100.00%		Q57849              	100.00%
Bootstrap support for Q75D62 as seed ortholog is 100%.
Bootstrap support for Q57849 as seed ortholog is 100%.

Group of orthologs #242. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 M.jannaschii:61

Q753E7              	100.00%		Q57741              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for Q57741 as seed ortholog is 100%.

Group of orthologs #243. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 M.jannaschii:61

Q754T6              	100.00%		Q58622              	100.00%
Bootstrap support for Q754T6 as seed ortholog is 100%.
Bootstrap support for Q58622 as seed ortholog is 100%.

Group of orthologs #244. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 M.jannaschii:60

Q74ZI3              	100.00%		Q58029              	100.00%
Bootstrap support for Q74ZI3 as seed ortholog is 100%.
Bootstrap support for Q58029 as seed ortholog is 100%.

Group of orthologs #245. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 M.jannaschii:60

Q75AY5              	100.00%		Q60343              	100.00%
Bootstrap support for Q75AY5 as seed ortholog is 100%.
Bootstrap support for Q60343 as seed ortholog is 100%.

Group of orthologs #246. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 M.jannaschii:59

Q753B3              	100.00%		Q58040              	100.00%
Bootstrap support for Q753B3 as seed ortholog is 100%.
Bootstrap support for Q58040 as seed ortholog is 100%.

Group of orthologs #247. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 M.jannaschii:17

Q756H6              	100.00%		Q58509              	100.00%
Bootstrap support for Q756H6 as seed ortholog is 100%.
Bootstrap support for Q58509 as seed ortholog is 72%.
Alternative seed ortholog is Q59040 (17 bits away from this cluster)

Group of orthologs #248. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 M.jannaschii:57

Q754B8              	100.00%		Q58488              	100.00%
                    	       		Q58967              	25.60%
                    	       		Q58903              	15.20%
                    	       		Q58418              	14.20%
                    	       		Q60350              	13.80%
                    	       		Q58206              	13.20%
                    	       		Q57855              	12.40%
                    	       		Q57554              	12.00%
                    	       		Q58663              	11.80%
                    	       		Q58283              	10.20%
                    	       		Q58762              	8.00%
                    	       		Q58429              	7.80%
                    	       		Q58664              	6.40%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for Q58488 as seed ortholog is 100%.

Group of orthologs #249. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 M.jannaschii:57

Q756F8              	100.00%		Q58916              	100.00%
                    	       		Q60362              	44.25%
Bootstrap support for Q756F8 as seed ortholog is 100%.
Bootstrap support for Q58916 as seed ortholog is 100%.

Group of orthologs #250. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 M.jannaschii:56

Q752L4              	100.00%		Q58220              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for Q58220 as seed ortholog is 100%.

Group of orthologs #251. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 M.jannaschii:56

Q757G1              	100.00%		P54110              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for P54110 as seed ortholog is 100%.

Group of orthologs #252. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 M.jannaschii:56

Q758L5              	100.00%		P54013              	100.00%
Bootstrap support for Q758L5 as seed ortholog is 100%.
Bootstrap support for P54013 as seed ortholog is 100%.

Group of orthologs #253. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 M.jannaschii:55

Q750J6              	100.00%		Q58905              	100.00%
Bootstrap support for Q750J6 as seed ortholog is 100%.
Bootstrap support for Q58905 as seed ortholog is 100%.

Group of orthologs #254. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 M.jannaschii:55

Q75AK5              	100.00%		P54053              	100.00%
Bootstrap support for Q75AK5 as seed ortholog is 100%.
Bootstrap support for P54053 as seed ortholog is 100%.

Group of orthologs #255. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 M.jannaschii:55

Q75C33              	100.00%		Q58298              	100.00%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for Q58298 as seed ortholog is 100%.

Group of orthologs #256. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 M.jannaschii:55

Q75DZ9              	100.00%		Q57842              	100.00%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for Q57842 as seed ortholog is 100%.

Group of orthologs #257. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 M.jannaschii:55

Q75EB0              	100.00%		Q58092              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for Q58092 as seed ortholog is 100%.

Group of orthologs #258. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 M.jannaschii:54

Q753J9              	100.00%		Q58237              	100.00%
Q75AR1              	45.79%		
Bootstrap support for Q753J9 as seed ortholog is 100%.
Bootstrap support for Q58237 as seed ortholog is 100%.

Group of orthologs #259. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 M.jannaschii:54

Q74ZH4              	100.00%		Q58337              	100.00%
Bootstrap support for Q74ZH4 as seed ortholog is 100%.
Bootstrap support for Q58337 as seed ortholog is 100%.

Group of orthologs #260. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 M.jannaschii:54

Q75DR6              	100.00%		Q58933              	100.00%
Bootstrap support for Q75DR6 as seed ortholog is 100%.
Bootstrap support for Q58933 as seed ortholog is 100%.

Group of orthologs #261. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 M.jannaschii:53

Q754N8              	100.00%		P54027              	100.00%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for P54027 as seed ortholog is 100%.

Group of orthologs #262. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 M.jannaschii:53

Q75AA2              	100.00%		Q58060              	100.00%
Bootstrap support for Q75AA2 as seed ortholog is 100%.
Bootstrap support for Q58060 as seed ortholog is 100%.

Group of orthologs #263. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 M.jannaschii:53

Q75BV8              	100.00%		Q57649              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for Q57649 as seed ortholog is 100%.

Group of orthologs #264. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 M.jannaschii:52

Q755A7              	100.00%		P54046              	100.00%
Q75ET5              	14.79%		
Bootstrap support for Q755A7 as seed ortholog is 100%.
Bootstrap support for P54046 as seed ortholog is 100%.

Group of orthologs #265. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 M.jannaschii:52

Q75AS7              	100.00%		P54022              	100.00%
Bootstrap support for Q75AS7 as seed ortholog is 100%.
Bootstrap support for P54022 as seed ortholog is 100%.

Group of orthologs #266. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 M.jannaschii:52

Q75AV0              	100.00%		Q58054              	100.00%
Bootstrap support for Q75AV0 as seed ortholog is 100%.
Bootstrap support for Q58054 as seed ortholog is 100%.

Group of orthologs #267. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 M.jannaschii:51

Q75E91              	100.00%		Q60354              	100.00%
Bootstrap support for Q75E91 as seed ortholog is 100%.
Bootstrap support for Q60354 as seed ortholog is 100%.

Group of orthologs #268. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 M.jannaschii:49

Q74Z11              	100.00%		Q57751              	100.00%
Bootstrap support for Q74Z11 as seed ortholog is 100%.
Bootstrap support for Q57751 as seed ortholog is 100%.

Group of orthologs #269. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 M.jannaschii:49

Q75C52              	100.00%		P54028              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for P54028 as seed ortholog is 100%.

Group of orthologs #270. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 M.jannaschii:49

Q75BE8              	100.00%		Q58414              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for Q58414 as seed ortholog is 100%.

Group of orthologs #271. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 M.jannaschii:49

Q75BT9              	100.00%		Q60182              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for Q60182 as seed ortholog is 100%.

Group of orthologs #272. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:3 M.jannaschii:48

Q75CF1              	100.00%		Q57832              	100.00%
Bootstrap support for Q75CF1 as seed ortholog is 55%.
Alternative seed ortholog is Q755Q7 (3 bits away from this cluster)
Bootstrap support for Q57832 as seed ortholog is 100%.

Group of orthologs #273. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 M.jannaschii:48

Q75A80              	100.00%		Q58925              	100.00%
Bootstrap support for Q75A80 as seed ortholog is 100%.
Bootstrap support for Q58925 as seed ortholog is 100%.

Group of orthologs #274. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 M.jannaschii:47

Q755T4              	100.00%		Q58735              	100.00%
Q75D02              	30.61%		
Q750L3              	29.34%		
Q75CK3              	23.98%		
Q74ZE2              	20.92%		
Q75F92              	20.41%		
Q75CA9              	19.13%		
Q758E9              	15.31%		
Q74ZA9              	9.69%		
Q752V9              	8.67%		
Q75B39              	8.67%		
Q9P8V0              	5.87%		
Q75CK6              	5.61%		
Bootstrap support for Q755T4 as seed ortholog is 100%.
Bootstrap support for Q58735 as seed ortholog is 100%.

Group of orthologs #275. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 M.jannaschii:47

Q751S7              	100.00%		Q58860              	100.00%
Bootstrap support for Q751S7 as seed ortholog is 100%.
Bootstrap support for Q58860 as seed ortholog is 100%.

Group of orthologs #276. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 M.jannaschii:47

Q75A25              	100.00%		P54035              	100.00%
Bootstrap support for Q75A25 as seed ortholog is 100%.
Bootstrap support for P54035 as seed ortholog is 100%.

Group of orthologs #277. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 M.jannaschii:47

Q75DL3              	100.00%		P54054              	100.00%
Bootstrap support for Q75DL3 as seed ortholog is 100%.
Bootstrap support for P54054 as seed ortholog is 100%.

Group of orthologs #278. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 M.jannaschii:46

Q757W4              	100.00%		Q58716              	100.00%
Q75CA1              	5.36%		
Bootstrap support for Q757W4 as seed ortholog is 100%.
Bootstrap support for Q58716 as seed ortholog is 100%.

Group of orthologs #279. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 M.jannaschii:45

Q75D16              	100.00%		Q58350              	100.00%
                    	       		Q57711              	49.15%
                    	       		O06917              	20.07%
                    	       		Q58823              	8.84%
Bootstrap support for Q75D16 as seed ortholog is 100%.
Bootstrap support for Q58350 as seed ortholog is 100%.

Group of orthologs #280. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 M.jannaschii:45

Q75AL4              	100.00%		Q58841              	100.00%
Q752Y4              	27.95%		
Q75C62              	22.05%		
Bootstrap support for Q75AL4 as seed ortholog is 100%.
Bootstrap support for Q58841 as seed ortholog is 100%.

Group of orthologs #281. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 M.jannaschii:44

Q8J1F7              	100.00%		Q58452              	100.00%
Bootstrap support for Q8J1F7 as seed ortholog is 100%.
Bootstrap support for Q58452 as seed ortholog is 100%.

Group of orthologs #282. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 M.jannaschii:41

Q750Y8              	100.00%		Q58923              	100.00%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for Q58923 as seed ortholog is 100%.

Group of orthologs #283. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 M.jannaschii:41

Q752T2              	100.00%		Q58920              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for Q58920 as seed ortholog is 100%.

Group of orthologs #284. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 M.jannaschii:40

Q75AP1              	100.00%		Q58927              	100.00%
                    	       		Q58114              	15.64%
Bootstrap support for Q75AP1 as seed ortholog is 100%.
Bootstrap support for Q58927 as seed ortholog is 100%.

Group of orthologs #285. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 M.jannaschii:40

Q75BJ3              	100.00%		Q58829              	100.00%
                    	       		Q58030              	12.78%
Bootstrap support for Q75BJ3 as seed ortholog is 100%.
Bootstrap support for Q58829 as seed ortholog is 100%.

Group of orthologs #286. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 M.jannaschii:40

Q75D36              	100.00%		Q58563              	100.00%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for Q58563 as seed ortholog is 100%.