###################################
1508 groups of orthologs
1604 in-paralogs from A.gossypii
1752 in-paralogs from C.variabilis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 2963 bits
Score difference with first non-orthologous sequence - A.gossypii:2963 C.variabilis:2963

Q75D15              	100.00%		E1ZPI5              	100.00%
Bootstrap support for Q75D15 as seed ortholog is 100%.
Bootstrap support for E1ZPI5 as seed ortholog is 100%.

Group of orthologs #2. Best score 1947 bits
Score difference with first non-orthologous sequence - A.gossypii:1947 C.variabilis:1947

Q759I7              	100.00%		E1Z360              	100.00%
Bootstrap support for Q759I7 as seed ortholog is 100%.
Bootstrap support for E1Z360 as seed ortholog is 100%.

Group of orthologs #3. Best score 1430 bits
Score difference with first non-orthologous sequence - A.gossypii:1430 C.variabilis:1430

Q75D82              	100.00%		E1ZNR9              	100.00%
Bootstrap support for Q75D82 as seed ortholog is 100%.
Bootstrap support for E1ZNR9 as seed ortholog is 100%.

Group of orthologs #4. Best score 1416 bits
Score difference with first non-orthologous sequence - A.gossypii:1416 C.variabilis:1210

Q753Q4              	100.00%		E1ZPQ6              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for E1ZPQ6 as seed ortholog is 100%.

Group of orthologs #5. Best score 1362 bits
Score difference with first non-orthologous sequence - A.gossypii:1362 C.variabilis:1362

Q752B8              	100.00%		E1ZP27              	100.00%
Bootstrap support for Q752B8 as seed ortholog is 100%.
Bootstrap support for E1ZP27 as seed ortholog is 100%.

Group of orthologs #6. Best score 1304 bits
Score difference with first non-orthologous sequence - A.gossypii:1304 C.variabilis:1304

Q756A8              	100.00%		E1ZQ18              	100.00%
Bootstrap support for Q756A8 as seed ortholog is 100%.
Bootstrap support for E1ZQ18 as seed ortholog is 100%.

Group of orthologs #7. Best score 1235 bits
Score difference with first non-orthologous sequence - A.gossypii:1235 C.variabilis:1000

Q75B52              	100.00%		E1ZPD8              	100.00%
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for E1ZPD8 as seed ortholog is 100%.

Group of orthologs #8. Best score 1215 bits
Score difference with first non-orthologous sequence - A.gossypii:1215 C.variabilis:1215

Q75EK8              	100.00%		E1Z4T6              	100.00%
Bootstrap support for Q75EK8 as seed ortholog is 100%.
Bootstrap support for E1Z4T6 as seed ortholog is 100%.

Group of orthologs #9. Best score 1178 bits
Score difference with first non-orthologous sequence - A.gossypii:1178 C.variabilis:794

Q75ED6              	100.00%		E1ZNZ6              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for E1ZNZ6 as seed ortholog is 100%.

Group of orthologs #10. Best score 1122 bits
Score difference with first non-orthologous sequence - A.gossypii:1122 C.variabilis:1122

Q755V8              	100.00%		E1Z4H4              	100.00%
Bootstrap support for Q755V8 as seed ortholog is 100%.
Bootstrap support for E1Z4H4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1111 bits
Score difference with first non-orthologous sequence - A.gossypii:660 C.variabilis:689

Q754B2              	100.00%		E1Z5R3              	100.00%
Bootstrap support for Q754B2 as seed ortholog is 100%.
Bootstrap support for E1Z5R3 as seed ortholog is 100%.

Group of orthologs #12. Best score 1109 bits
Score difference with first non-orthologous sequence - A.gossypii:296 C.variabilis:1109

Q75AI4              	100.00%		E1ZQX5              	100.00%
Bootstrap support for Q75AI4 as seed ortholog is 100%.
Bootstrap support for E1ZQX5 as seed ortholog is 100%.

Group of orthologs #13. Best score 1066 bits
Score difference with first non-orthologous sequence - A.gossypii:1066 C.variabilis:1066

Q74ZT5              	100.00%		E1Z6L6              	100.00%
Bootstrap support for Q74ZT5 as seed ortholog is 100%.
Bootstrap support for E1Z6L6 as seed ortholog is 100%.

Group of orthologs #14. Best score 1066 bits
Score difference with first non-orthologous sequence - A.gossypii:1066 C.variabilis:885

Q755X4              	100.00%		E1Z4B5              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 100%.
Bootstrap support for E1Z4B5 as seed ortholog is 100%.

Group of orthologs #15. Best score 1013 bits
Score difference with first non-orthologous sequence - A.gossypii:1013 C.variabilis:1013

Q75DB0              	100.00%		E1ZE77              	100.00%
Bootstrap support for Q75DB0 as seed ortholog is 100%.
Bootstrap support for E1ZE77 as seed ortholog is 100%.

Group of orthologs #16. Best score 978 bits
Score difference with first non-orthologous sequence - A.gossypii:978 C.variabilis:582

Q75A67              	100.00%		E1ZFA2              	100.00%
Bootstrap support for Q75A67 as seed ortholog is 100%.
Bootstrap support for E1ZFA2 as seed ortholog is 100%.

Group of orthologs #17. Best score 964 bits
Score difference with first non-orthologous sequence - A.gossypii:964 C.variabilis:964

Q759E3              	100.00%		E1Z7G3              	100.00%
Bootstrap support for Q759E3 as seed ortholog is 100%.
Bootstrap support for E1Z7G3 as seed ortholog is 100%.

Group of orthologs #18. Best score 953 bits
Score difference with first non-orthologous sequence - A.gossypii:648 C.variabilis:708

Q755K6              	100.00%		E1Z6R0              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for E1Z6R0 as seed ortholog is 100%.

Group of orthologs #19. Best score 916 bits
Score difference with first non-orthologous sequence - A.gossypii:392 C.variabilis:140

Q758E3              	100.00%		E1ZSU9              	100.00%
Bootstrap support for Q758E3 as seed ortholog is 100%.
Bootstrap support for E1ZSU9 as seed ortholog is 99%.

Group of orthologs #20. Best score 914 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:339

Q754F6              	100.00%		E1Z7R4              	100.00%
Q756R7              	43.95%		E1ZQV2              	26.85%
Bootstrap support for Q754F6 as seed ortholog is 99%.
Bootstrap support for E1Z7R4 as seed ortholog is 100%.

Group of orthologs #21. Best score 848 bits
Score difference with first non-orthologous sequence - A.gossypii:219 C.variabilis:313

Q75E97              	100.00%		E1Z365              	100.00%
Bootstrap support for Q75E97 as seed ortholog is 100%.
Bootstrap support for E1Z365 as seed ortholog is 100%.

Group of orthologs #22. Best score 839 bits
Score difference with first non-orthologous sequence - A.gossypii:839 C.variabilis:839

Q9C1M7              	100.00%		E1Z318              	100.00%
                    	       		E1ZQU4              	12.01%
Bootstrap support for Q9C1M7 as seed ortholog is 100%.
Bootstrap support for E1Z318 as seed ortholog is 100%.

Group of orthologs #23. Best score 836 bits
Score difference with first non-orthologous sequence - A.gossypii:836 C.variabilis:836

Q75F16              	100.00%		E1ZQQ7              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for E1ZQQ7 as seed ortholog is 100%.

Group of orthologs #24. Best score 826 bits
Score difference with first non-orthologous sequence - A.gossypii:141 C.variabilis:640

Q75EV6              	100.00%		E1ZGT6              	100.00%
Bootstrap support for Q75EV6 as seed ortholog is 99%.
Bootstrap support for E1ZGT6 as seed ortholog is 100%.

Group of orthologs #25. Best score 817 bits
Score difference with first non-orthologous sequence - A.gossypii:411 C.variabilis:817

Q752N7              	100.00%		E1Z7Y7              	100.00%
Q754V7              	17.46%		
Bootstrap support for Q752N7 as seed ortholog is 100%.
Bootstrap support for E1Z7Y7 as seed ortholog is 100%.

Group of orthologs #26. Best score 796 bits
Score difference with first non-orthologous sequence - A.gossypii:796 C.variabilis:796

Q75AP8              	100.00%		E1ZN82              	100.00%
Bootstrap support for Q75AP8 as seed ortholog is 100%.
Bootstrap support for E1ZN82 as seed ortholog is 100%.

Group of orthologs #27. Best score 779 bits
Score difference with first non-orthologous sequence - A.gossypii:443 C.variabilis:318

Q75CZ5              	100.00%		E1Z1Z5              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 100%.
Bootstrap support for E1Z1Z5 as seed ortholog is 100%.

Group of orthologs #28. Best score 767 bits
Score difference with first non-orthologous sequence - A.gossypii:767 C.variabilis:767

Q74ZJ9              	100.00%		E1ZFI8              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for E1ZFI8 as seed ortholog is 100%.

Group of orthologs #29. Best score 764 bits
Score difference with first non-orthologous sequence - A.gossypii:764 C.variabilis:764

Q9UVJ8              	100.00%		E1ZT42              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for E1ZT42 as seed ortholog is 100%.

Group of orthologs #30. Best score 759 bits
Score difference with first non-orthologous sequence - A.gossypii:759 C.variabilis:78

Q75EP5              	100.00%		E1Z7C9              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for E1Z7C9 as seed ortholog is 99%.

Group of orthologs #31. Best score 749 bits
Score difference with first non-orthologous sequence - A.gossypii:182 C.variabilis:86

Q753R1              	100.00%		E1ZMD2              	100.00%
Bootstrap support for Q753R1 as seed ortholog is 99%.
Bootstrap support for E1ZMD2 as seed ortholog is 97%.

Group of orthologs #32. Best score 747 bits
Score difference with first non-orthologous sequence - A.gossypii:150 C.variabilis:163

Q750B0              	100.00%		E1ZA16              	100.00%
Bootstrap support for Q750B0 as seed ortholog is 100%.
Bootstrap support for E1ZA16 as seed ortholog is 98%.

Group of orthologs #33. Best score 726 bits
Score difference with first non-orthologous sequence - A.gossypii:417 C.variabilis:726

Q753Z4              	100.00%		E1ZQ28              	100.00%
Bootstrap support for Q753Z4 as seed ortholog is 100%.
Bootstrap support for E1ZQ28 as seed ortholog is 100%.

Group of orthologs #34. Best score 717 bits
Score difference with first non-orthologous sequence - A.gossypii:717 C.variabilis:531

Q75C64              	100.00%		E1ZH40              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for E1ZH40 as seed ortholog is 100%.

Group of orthologs #35. Best score 713 bits
Score difference with first non-orthologous sequence - A.gossypii:713 C.variabilis:713

Q755E1              	100.00%		E1ZFC8              	100.00%
Bootstrap support for Q755E1 as seed ortholog is 100%.
Bootstrap support for E1ZFC8 as seed ortholog is 100%.

Group of orthologs #36. Best score 703 bits
Score difference with first non-orthologous sequence - A.gossypii:703 C.variabilis:93

Q758I5              	100.00%		E1ZLG3              	100.00%
Bootstrap support for Q758I5 as seed ortholog is 100%.
Bootstrap support for E1ZLG3 as seed ortholog is 96%.

Group of orthologs #37. Best score 697 bits
Score difference with first non-orthologous sequence - A.gossypii:425 C.variabilis:604

Q753G0              	100.00%		E1Z7N5              	100.00%
Bootstrap support for Q753G0 as seed ortholog is 100%.
Bootstrap support for E1Z7N5 as seed ortholog is 100%.

Group of orthologs #38. Best score 689 bits
Score difference with first non-orthologous sequence - A.gossypii:689 C.variabilis:689

Q754Q9              	100.00%		E1Z3L7              	100.00%
Bootstrap support for Q754Q9 as seed ortholog is 100%.
Bootstrap support for E1Z3L7 as seed ortholog is 100%.

Group of orthologs #39. Best score 683 bits
Score difference with first non-orthologous sequence - A.gossypii:528 C.variabilis:683

Q74ZW9              	100.00%		E1ZGE5              	100.00%
Bootstrap support for Q74ZW9 as seed ortholog is 100%.
Bootstrap support for E1ZGE5 as seed ortholog is 100%.

Group of orthologs #40. Best score 682 bits
Score difference with first non-orthologous sequence - A.gossypii:614 C.variabilis:138

Q750I7              	100.00%		E1Z691              	100.00%
Bootstrap support for Q750I7 as seed ortholog is 100%.
Bootstrap support for E1Z691 as seed ortholog is 98%.

Group of orthologs #41. Best score 680 bits
Score difference with first non-orthologous sequence - A.gossypii:680 C.variabilis:680

Q75BP6              	100.00%		E1ZJM1              	100.00%
Bootstrap support for Q75BP6 as seed ortholog is 100%.
Bootstrap support for E1ZJM1 as seed ortholog is 100%.

Group of orthologs #42. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:229 C.variabilis:175

Q759C3              	100.00%		E1Z751              	100.00%
Bootstrap support for Q759C3 as seed ortholog is 99%.
Bootstrap support for E1Z751 as seed ortholog is 99%.

Group of orthologs #43. Best score 672 bits
Score difference with first non-orthologous sequence - A.gossypii:672 C.variabilis:672

Q753A4              	100.00%		E1ZJ65              	100.00%
Bootstrap support for Q753A4 as seed ortholog is 100%.
Bootstrap support for E1ZJ65 as seed ortholog is 100%.

Group of orthologs #44. Best score 668 bits
Score difference with first non-orthologous sequence - A.gossypii:668 C.variabilis:668

Q759A4              	100.00%		E1Z9W8              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 100%.
Bootstrap support for E1Z9W8 as seed ortholog is 100%.

Group of orthologs #45. Best score 667 bits
Score difference with first non-orthologous sequence - A.gossypii:667 C.variabilis:667

Q75EM2              	100.00%		E1Z9K4              	100.00%
Bootstrap support for Q75EM2 as seed ortholog is 100%.
Bootstrap support for E1Z9K4 as seed ortholog is 100%.

Group of orthologs #46. Best score 665 bits
Score difference with first non-orthologous sequence - A.gossypii:665 C.variabilis:665

Q752Y2              	100.00%		E1Z4E5              	100.00%
Bootstrap support for Q752Y2 as seed ortholog is 100%.
Bootstrap support for E1Z4E5 as seed ortholog is 100%.

Group of orthologs #47. Best score 658 bits
Score difference with first non-orthologous sequence - A.gossypii:259 C.variabilis:501

Q75D00              	100.00%		E1ZLQ3              	100.00%
Bootstrap support for Q75D00 as seed ortholog is 100%.
Bootstrap support for E1ZLQ3 as seed ortholog is 100%.

Group of orthologs #48. Best score 656 bits
Score difference with first non-orthologous sequence - A.gossypii:656 C.variabilis:656

Q74Z60              	100.00%		E1ZAA5              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for E1ZAA5 as seed ortholog is 100%.

Group of orthologs #49. Best score 650 bits
Score difference with first non-orthologous sequence - A.gossypii:650 C.variabilis:650

Q75D48              	100.00%		E1ZGJ2              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for E1ZGJ2 as seed ortholog is 100%.

Group of orthologs #50. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:649 C.variabilis:649

Q755Z3              	100.00%		E1ZAL3              	100.00%
Bootstrap support for Q755Z3 as seed ortholog is 100%.
Bootstrap support for E1ZAL3 as seed ortholog is 100%.

Group of orthologs #51. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:406 C.variabilis:543

Q74ZH1              	100.00%		E1ZRU9              	100.00%
Bootstrap support for Q74ZH1 as seed ortholog is 100%.
Bootstrap support for E1ZRU9 as seed ortholog is 100%.

Group of orthologs #52. Best score 646 bits
Score difference with first non-orthologous sequence - A.gossypii:476 C.variabilis:320

Q757P3              	100.00%		E1ZFR6              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for E1ZFR6 as seed ortholog is 99%.

Group of orthologs #53. Best score 638 bits
Score difference with first non-orthologous sequence - A.gossypii:638 C.variabilis:562

Q754K5              	100.00%		E1ZLA6              	100.00%
Bootstrap support for Q754K5 as seed ortholog is 100%.
Bootstrap support for E1ZLA6 as seed ortholog is 100%.

Group of orthologs #54. Best score 636 bits
Score difference with first non-orthologous sequence - A.gossypii:636 C.variabilis:529

Q753A6              	100.00%		E1ZNV9              	100.00%
Bootstrap support for Q753A6 as seed ortholog is 100%.
Bootstrap support for E1ZNV9 as seed ortholog is 100%.

Group of orthologs #55. Best score 634 bits
Score difference with first non-orthologous sequence - A.gossypii:634 C.variabilis:436

Q75C66              	100.00%		E1Z7D4              	100.00%
Bootstrap support for Q75C66 as seed ortholog is 100%.
Bootstrap support for E1Z7D4 as seed ortholog is 100%.

Group of orthologs #56. Best score 633 bits
Score difference with first non-orthologous sequence - A.gossypii:633 C.variabilis:580

Q751B1              	100.00%		E1ZGA1              	100.00%
Bootstrap support for Q751B1 as seed ortholog is 100%.
Bootstrap support for E1ZGA1 as seed ortholog is 100%.

Group of orthologs #57. Best score 631 bits
Score difference with first non-orthologous sequence - A.gossypii:631 C.variabilis:631

Q75CE3              	100.00%		E1Z5J6              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for E1Z5J6 as seed ortholog is 100%.

Group of orthologs #58. Best score 629 bits
Score difference with first non-orthologous sequence - A.gossypii:629 C.variabilis:540

Q755V3              	100.00%		E1ZFE4              	100.00%
Bootstrap support for Q755V3 as seed ortholog is 100%.
Bootstrap support for E1ZFE4 as seed ortholog is 100%.

Group of orthologs #59. Best score 629 bits
Score difference with first non-orthologous sequence - A.gossypii:629 C.variabilis:629

Q75C45              	100.00%		E1ZKI8              	100.00%
Bootstrap support for Q75C45 as seed ortholog is 100%.
Bootstrap support for E1ZKI8 as seed ortholog is 100%.

Group of orthologs #60. Best score 628 bits
Score difference with first non-orthologous sequence - A.gossypii:628 C.variabilis:628

Q75BD2              	100.00%		E1ZGR1              	100.00%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for E1ZGR1 as seed ortholog is 100%.

Group of orthologs #61. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 C.variabilis:572

Q74Z89              	100.00%		E1Z9V3              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 100%.
Bootstrap support for E1Z9V3 as seed ortholog is 100%.

Group of orthologs #62. Best score 624 bits
Score difference with first non-orthologous sequence - A.gossypii:624 C.variabilis:624

Q753M0              	100.00%		E1Z2U6              	100.00%
                    	       		E1ZQ93              	30.76%
                    	       		E1ZND4              	24.46%
Bootstrap support for Q753M0 as seed ortholog is 100%.
Bootstrap support for E1Z2U6 as seed ortholog is 100%.

Group of orthologs #63. Best score 622 bits
Score difference with first non-orthologous sequence - A.gossypii:622 C.variabilis:622

Q751L7              	100.00%		E1ZPY4              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for E1ZPY4 as seed ortholog is 100%.

Group of orthologs #64. Best score 622 bits
Score difference with first non-orthologous sequence - A.gossypii:622 C.variabilis:48

Q75D54              	100.00%		F2YGR0              	100.00%
Bootstrap support for Q75D54 as seed ortholog is 100%.
Bootstrap support for F2YGR0 as seed ortholog is 95%.

Group of orthologs #65. Best score 619 bits
Score difference with first non-orthologous sequence - A.gossypii:619 C.variabilis:619

Q75EU2              	100.00%		E1ZQU7              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for E1ZQU7 as seed ortholog is 100%.

Group of orthologs #66. Best score 617 bits
Score difference with first non-orthologous sequence - A.gossypii:617 C.variabilis:617

Q75DY5              	100.00%		E1ZGL3              	100.00%
Bootstrap support for Q75DY5 as seed ortholog is 100%.
Bootstrap support for E1ZGL3 as seed ortholog is 100%.

Group of orthologs #67. Best score 614 bits
Score difference with first non-orthologous sequence - A.gossypii:614 C.variabilis:614

Q75CF3              	100.00%		E1ZCY5              	100.00%
Bootstrap support for Q75CF3 as seed ortholog is 100%.
Bootstrap support for E1ZCY5 as seed ortholog is 100%.

Group of orthologs #68. Best score 611 bits
Score difference with first non-orthologous sequence - A.gossypii:543 C.variabilis:493

Q750T7              	100.00%		E1ZLA8              	100.00%
Q758X0              	19.54%		E1ZLE1              	29.41%
                    	       		E1ZSG1              	16.37%
Bootstrap support for Q750T7 as seed ortholog is 100%.
Bootstrap support for E1ZLA8 as seed ortholog is 100%.

Group of orthologs #69. Best score 611 bits
Score difference with first non-orthologous sequence - A.gossypii:380 C.variabilis:240

Q755N4              	100.00%		E1Z7Y2              	100.00%
Bootstrap support for Q755N4 as seed ortholog is 100%.
Bootstrap support for E1Z7Y2 as seed ortholog is 100%.

Group of orthologs #70. Best score 609 bits
Score difference with first non-orthologous sequence - A.gossypii:401 C.variabilis:405

Q74Z73              	100.00%		E1Z935              	100.00%
Bootstrap support for Q74Z73 as seed ortholog is 100%.
Bootstrap support for E1Z935 as seed ortholog is 100%.

Group of orthologs #71. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 C.variabilis:601

Q757Q6              	100.00%		E1Z6J6              	100.00%
Bootstrap support for Q757Q6 as seed ortholog is 100%.
Bootstrap support for E1Z6J6 as seed ortholog is 100%.

Group of orthologs #72. Best score 600 bits
Score difference with first non-orthologous sequence - A.gossypii:600 C.variabilis:600

Q75D66              	100.00%		E1ZPY8              	100.00%
Bootstrap support for Q75D66 as seed ortholog is 100%.
Bootstrap support for E1ZPY8 as seed ortholog is 100%.

Group of orthologs #73. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:226 C.variabilis:594

Q759C7              	100.00%		E1Z750              	100.00%
Q74ZS8              	6.74%		
Bootstrap support for Q759C7 as seed ortholog is 99%.
Bootstrap support for E1Z750 as seed ortholog is 100%.

Group of orthologs #74. Best score 592 bits
Score difference with first non-orthologous sequence - A.gossypii:592 C.variabilis:592

Q759E6              	100.00%		E1ZHR5              	100.00%
Bootstrap support for Q759E6 as seed ortholog is 100%.
Bootstrap support for E1ZHR5 as seed ortholog is 100%.

Group of orthologs #75. Best score 589 bits
Score difference with first non-orthologous sequence - A.gossypii:400 C.variabilis:456

Q756T4              	100.00%		E1Z628              	100.00%
Bootstrap support for Q756T4 as seed ortholog is 100%.
Bootstrap support for E1Z628 as seed ortholog is 100%.

Group of orthologs #76. Best score 589 bits
Score difference with first non-orthologous sequence - A.gossypii:589 C.variabilis:432

Q757M5              	100.00%		E1ZEM7              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 100%.
Bootstrap support for E1ZEM7 as seed ortholog is 100%.

Group of orthologs #77. Best score 585 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:585

Q752M8              	100.00%		E1ZS85              	100.00%
Bootstrap support for Q752M8 as seed ortholog is 100%.
Bootstrap support for E1ZS85 as seed ortholog is 100%.

Group of orthologs #78. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:584 C.variabilis:584

Q751H8              	100.00%		F2YGQ9              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for F2YGQ9 as seed ortholog is 100%.

Group of orthologs #79. Best score 582 bits
Score difference with first non-orthologous sequence - A.gossypii:582 C.variabilis:582

Q750R1              	100.00%		E1ZF36              	100.00%
Bootstrap support for Q750R1 as seed ortholog is 100%.
Bootstrap support for E1ZF36 as seed ortholog is 100%.

Group of orthologs #80. Best score 579 bits
Score difference with first non-orthologous sequence - A.gossypii:579 C.variabilis:508

Q750R3              	100.00%		E1ZBA9              	100.00%
Bootstrap support for Q750R3 as seed ortholog is 100%.
Bootstrap support for E1ZBA9 as seed ortholog is 100%.

Group of orthologs #81. Best score 577 bits
Score difference with first non-orthologous sequence - A.gossypii:398 C.variabilis:577

Q75D18              	100.00%		E1Z4A0              	100.00%
Bootstrap support for Q75D18 as seed ortholog is 100%.
Bootstrap support for E1Z4A0 as seed ortholog is 100%.

Group of orthologs #82. Best score 576 bits
Score difference with first non-orthologous sequence - A.gossypii:576 C.variabilis:576

Q752T2              	100.00%		E1ZGA8              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for E1ZGA8 as seed ortholog is 100%.

Group of orthologs #83. Best score 569 bits
Score difference with first non-orthologous sequence - A.gossypii:303 C.variabilis:76

Q754T2              	100.00%		E1ZTD2              	100.00%
                    	       		E1Z9M4              	43.88%
Bootstrap support for Q754T2 as seed ortholog is 100%.
Bootstrap support for E1ZTD2 as seed ortholog is 89%.

Group of orthologs #84. Best score 567 bits
Score difference with first non-orthologous sequence - A.gossypii:271 C.variabilis:567

Q75AE3              	100.00%		E1Z937              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 99%.
Bootstrap support for E1Z937 as seed ortholog is 100%.

Group of orthologs #85. Best score 564 bits
Score difference with first non-orthologous sequence - A.gossypii:442 C.variabilis:133

Q74ZG2              	100.00%		E1ZB26              	100.00%
Bootstrap support for Q74ZG2 as seed ortholog is 100%.
Bootstrap support for E1ZB26 as seed ortholog is 99%.

Group of orthologs #86. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:142 C.variabilis:293

Q753U3              	100.00%		E1ZQ41              	100.00%
Bootstrap support for Q753U3 as seed ortholog is 99%.
Bootstrap support for E1ZQ41 as seed ortholog is 100%.

Group of orthologs #87. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 C.variabilis:555

Q750T6              	100.00%		E1ZH13              	100.00%
Bootstrap support for Q750T6 as seed ortholog is 100%.
Bootstrap support for E1ZH13 as seed ortholog is 100%.

Group of orthologs #88. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:234 C.variabilis:216

Q75CF8              	100.00%		E1ZPD1              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 99%.
Bootstrap support for E1ZPD1 as seed ortholog is 99%.

Group of orthologs #89. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 C.variabilis:389

Q756K0              	100.00%		E1ZFG9              	100.00%
Bootstrap support for Q756K0 as seed ortholog is 100%.
Bootstrap support for E1ZFG9 as seed ortholog is 100%.

Group of orthologs #90. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:552 C.variabilis:404

Q751F3              	100.00%		E1ZPH9              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 100%.
Bootstrap support for E1ZPH9 as seed ortholog is 100%.

Group of orthologs #91. Best score 550 bits
Score difference with first non-orthologous sequence - A.gossypii:550 C.variabilis:550

Q74ZE0              	100.00%		E1Z7M5              	100.00%
Bootstrap support for Q74ZE0 as seed ortholog is 100%.
Bootstrap support for E1Z7M5 as seed ortholog is 100%.

Group of orthologs #92. Best score 550 bits
Score difference with first non-orthologous sequence - A.gossypii:550 C.variabilis:550

Q757I5              	100.00%		E1Z4D8              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for E1Z4D8 as seed ortholog is 100%.

Group of orthologs #93. Best score 545 bits
Score difference with first non-orthologous sequence - A.gossypii:545 C.variabilis:545

Q753C2              	100.00%		E1ZC11              	100.00%
Bootstrap support for Q753C2 as seed ortholog is 100%.
Bootstrap support for E1ZC11 as seed ortholog is 100%.

Group of orthologs #94. Best score 544 bits
Score difference with first non-orthologous sequence - A.gossypii:544 C.variabilis:343

Q75F41              	100.00%		E1Z980              	100.00%
Bootstrap support for Q75F41 as seed ortholog is 100%.
Bootstrap support for E1Z980 as seed ortholog is 100%.

Group of orthologs #95. Best score 544 bits
Score difference with first non-orthologous sequence - A.gossypii:544 C.variabilis:146

Q751N2              	100.00%		E1ZNG0              	100.00%
Bootstrap support for Q751N2 as seed ortholog is 100%.
Bootstrap support for E1ZNG0 as seed ortholog is 99%.

Group of orthologs #96. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:542 C.variabilis:542

Q75A42              	100.00%		E1Z3X6              	100.00%
Bootstrap support for Q75A42 as seed ortholog is 100%.
Bootstrap support for E1Z3X6 as seed ortholog is 100%.

Group of orthologs #97. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:542 C.variabilis:542

Q759R7              	100.00%		E1ZD41              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for E1ZD41 as seed ortholog is 100%.

Group of orthologs #98. Best score 541 bits
Score difference with first non-orthologous sequence - A.gossypii:541 C.variabilis:70

Q751I0              	100.00%		E1Z871              	100.00%
Bootstrap support for Q751I0 as seed ortholog is 100%.
Bootstrap support for E1Z871 as seed ortholog is 89%.

Group of orthologs #99. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 C.variabilis:539

Q757F2              	100.00%		E1Z4A2              	100.00%
Q75ET8              	16.01%		
Bootstrap support for Q757F2 as seed ortholog is 100%.
Bootstrap support for E1Z4A2 as seed ortholog is 100%.

Group of orthologs #100. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 C.variabilis:539

Q75BD7              	100.00%		E1Z5G6              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for E1Z5G6 as seed ortholog is 100%.

Group of orthologs #101. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:240 C.variabilis:537

Q753F9              	100.00%		E1ZKU2              	100.00%
Bootstrap support for Q753F9 as seed ortholog is 99%.
Bootstrap support for E1ZKU2 as seed ortholog is 100%.

Group of orthologs #102. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 C.variabilis:534

Q754W3              	100.00%		E1Z3T4              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for E1Z3T4 as seed ortholog is 100%.

Group of orthologs #103. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 C.variabilis:425

Q75A36              	100.00%		E1Z6D9              	100.00%
Bootstrap support for Q75A36 as seed ortholog is 100%.
Bootstrap support for E1Z6D9 as seed ortholog is 100%.

Group of orthologs #104. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:532 C.variabilis:403

Q75E20              	100.00%		E1Z9W3              	100.00%
Bootstrap support for Q75E20 as seed ortholog is 100%.
Bootstrap support for E1Z9W3 as seed ortholog is 100%.

Group of orthologs #105. Best score 529 bits
Score difference with first non-orthologous sequence - A.gossypii:529 C.variabilis:529

Q758Z0              	100.00%		E1ZGG0              	100.00%
Bootstrap support for Q758Z0 as seed ortholog is 100%.
Bootstrap support for E1ZGG0 as seed ortholog is 100%.

Group of orthologs #106. Best score 525 bits
Score difference with first non-orthologous sequence - A.gossypii:290 C.variabilis:253

Q75B50              	100.00%		E1ZJL1              	100.00%
Bootstrap support for Q75B50 as seed ortholog is 100%.
Bootstrap support for E1ZJL1 as seed ortholog is 99%.

Group of orthologs #107. Best score 524 bits
Score difference with first non-orthologous sequence - A.gossypii:524 C.variabilis:524

Q755G5              	100.00%		E1ZJT4              	100.00%
Bootstrap support for Q755G5 as seed ortholog is 100%.
Bootstrap support for E1ZJT4 as seed ortholog is 100%.

Group of orthologs #108. Best score 524 bits
Score difference with first non-orthologous sequence - A.gossypii:148 C.variabilis:302

Q754A6              	100.00%		E1ZQU8              	100.00%
Bootstrap support for Q754A6 as seed ortholog is 100%.
Bootstrap support for E1ZQU8 as seed ortholog is 100%.

Group of orthologs #109. Best score 522 bits
Score difference with first non-orthologous sequence - A.gossypii:522 C.variabilis:294

O60028              	100.00%		E1ZRR8              	100.00%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for E1ZRR8 as seed ortholog is 100%.

Group of orthologs #110. Best score 521 bits
Score difference with first non-orthologous sequence - A.gossypii:521 C.variabilis:521

Q75D90              	100.00%		E1ZTL2              	100.00%
Bootstrap support for Q75D90 as seed ortholog is 100%.
Bootstrap support for E1ZTL2 as seed ortholog is 100%.

Group of orthologs #111. Best score 518 bits
Score difference with first non-orthologous sequence - A.gossypii:518 C.variabilis:281

Q752R1              	100.00%		E1ZQV8              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for E1ZQV8 as seed ortholog is 100%.

Group of orthologs #112. Best score 516 bits
Score difference with first non-orthologous sequence - A.gossypii:516 C.variabilis:516

Q75BR1              	100.00%		E1ZIW7              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for E1ZIW7 as seed ortholog is 100%.

Group of orthologs #113. Best score 510 bits
Score difference with first non-orthologous sequence - A.gossypii:510 C.variabilis:359

Q75ED8              	100.00%		E1Z696              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for E1Z696 as seed ortholog is 100%.

Group of orthologs #114. Best score 509 bits
Score difference with first non-orthologous sequence - A.gossypii:509 C.variabilis:509

Q75DC5              	100.00%		E1Z9K0              	100.00%
Bootstrap support for Q75DC5 as seed ortholog is 100%.
Bootstrap support for E1Z9K0 as seed ortholog is 100%.

Group of orthologs #115. Best score 506 bits
Score difference with first non-orthologous sequence - A.gossypii:506 C.variabilis:92

Q754B5              	100.00%		E1ZRQ6              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for E1ZRQ6 as seed ortholog is 97%.

Group of orthologs #116. Best score 505 bits
Score difference with first non-orthologous sequence - A.gossypii:505 C.variabilis:14

Q75BQ6              	100.00%		E1Z3F6              	100.00%
Q758F0              	14.16%		
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for E1Z3F6 as seed ortholog is 64%.
Alternative seed ortholog is E1ZT16 (14 bits away from this cluster)

Group of orthologs #117. Best score 505 bits
Score difference with first non-orthologous sequence - A.gossypii:505 C.variabilis:505

Q753T3              	100.00%		E1ZSI5              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for E1ZSI5 as seed ortholog is 100%.

Group of orthologs #118. Best score 501 bits
Score difference with first non-orthologous sequence - A.gossypii:501 C.variabilis:501

Q758F5              	100.00%		E1ZH84              	100.00%
Bootstrap support for Q758F5 as seed ortholog is 100%.
Bootstrap support for E1ZH84 as seed ortholog is 100%.

Group of orthologs #119. Best score 499 bits
Score difference with first non-orthologous sequence - A.gossypii:499 C.variabilis:179

Q75F90              	100.00%		E1ZLL0              	100.00%
Bootstrap support for Q75F90 as seed ortholog is 100%.
Bootstrap support for E1ZLL0 as seed ortholog is 99%.

Group of orthologs #120. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:498 C.variabilis:79

Q753S1              	100.00%		E1Z7T6              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for E1Z7T6 as seed ortholog is 81%.

Group of orthologs #121. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:498 C.variabilis:498

Q74Z74              	100.00%		E1ZNB3              	100.00%
Bootstrap support for Q74Z74 as seed ortholog is 100%.
Bootstrap support for E1ZNB3 as seed ortholog is 100%.

Group of orthologs #122. Best score 497 bits
Score difference with first non-orthologous sequence - A.gossypii:366 C.variabilis:497

Q75CD0              	100.00%		E1ZMU6              	100.00%
Bootstrap support for Q75CD0 as seed ortholog is 100%.
Bootstrap support for E1ZMU6 as seed ortholog is 100%.

Group of orthologs #123. Best score 495 bits
Score difference with first non-orthologous sequence - A.gossypii:151 C.variabilis:327

Q75A21              	100.00%		E1Z283              	100.00%
Bootstrap support for Q75A21 as seed ortholog is 100%.
Bootstrap support for E1Z283 as seed ortholog is 100%.

Group of orthologs #124. Best score 494 bits
Score difference with first non-orthologous sequence - A.gossypii:494 C.variabilis:494

Q759U6              	100.00%		E1ZA42              	100.00%
Q759Z6              	21.44%		
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for E1ZA42 as seed ortholog is 100%.

Group of orthologs #125. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:286 C.variabilis:277

Q75C76              	100.00%		E1ZSH1              	100.00%
Bootstrap support for Q75C76 as seed ortholog is 100%.
Bootstrap support for E1ZSH1 as seed ortholog is 100%.

Group of orthologs #126. Best score 489 bits
Score difference with first non-orthologous sequence - A.gossypii:134 C.variabilis:489

Q75ES5              	100.00%		E1ZKH5              	100.00%
Bootstrap support for Q75ES5 as seed ortholog is 99%.
Bootstrap support for E1ZKH5 as seed ortholog is 100%.

Group of orthologs #127. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:486 C.variabilis:486

Q756A7              	100.00%		E1Z6P2              	100.00%
Bootstrap support for Q756A7 as seed ortholog is 100%.
Bootstrap support for E1Z6P2 as seed ortholog is 100%.

Group of orthologs #128. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:486 C.variabilis:486

Q75DS1              	100.00%		E1Z5A3              	100.00%
Bootstrap support for Q75DS1 as seed ortholog is 100%.
Bootstrap support for E1Z5A3 as seed ortholog is 100%.

Group of orthologs #129. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:226 C.variabilis:292

Q75BL8              	100.00%		E1ZM95              	100.00%
Bootstrap support for Q75BL8 as seed ortholog is 100%.
Bootstrap support for E1ZM95 as seed ortholog is 100%.

Group of orthologs #130. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:260 C.variabilis:226

Q750T4              	100.00%		E1Z3S9              	100.00%
Bootstrap support for Q750T4 as seed ortholog is 100%.
Bootstrap support for E1Z3S9 as seed ortholog is 100%.

Group of orthologs #131. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:130 C.variabilis:325

Q75CG3              	100.00%		E1Z2Y1              	100.00%
Q758W1              	29.29%		
Bootstrap support for Q75CG3 as seed ortholog is 99%.
Bootstrap support for E1Z2Y1 as seed ortholog is 100%.

Group of orthologs #132. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:215 C.variabilis:278

Q755W0              	100.00%		E1Z284              	100.00%
Bootstrap support for Q755W0 as seed ortholog is 100%.
Bootstrap support for E1Z284 as seed ortholog is 100%.

Group of orthologs #133. Best score 482 bits
Score difference with first non-orthologous sequence - A.gossypii:482 C.variabilis:482

Q75D10              	100.00%		E1Z7H8              	100.00%
Bootstrap support for Q75D10 as seed ortholog is 100%.
Bootstrap support for E1Z7H8 as seed ortholog is 100%.

Group of orthologs #134. Best score 482 bits
Score difference with first non-orthologous sequence - A.gossypii:328 C.variabilis:289

Q75BS4              	100.00%		E1Z973              	100.00%
Bootstrap support for Q75BS4 as seed ortholog is 100%.
Bootstrap support for E1Z973 as seed ortholog is 100%.

Group of orthologs #135. Best score 481 bits
Score difference with first non-orthologous sequence - A.gossypii:481 C.variabilis:481

Q74ZC0              	100.00%		E1Z749              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for E1Z749 as seed ortholog is 100%.

Group of orthologs #136. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 C.variabilis:480

Q75BQ2              	100.00%		E1ZN52              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for E1ZN52 as seed ortholog is 100%.

Group of orthologs #137. Best score 478 bits
Score difference with first non-orthologous sequence - A.gossypii:478 C.variabilis:478

Q750Y5              	100.00%		E1ZIF0              	100.00%
Bootstrap support for Q750Y5 as seed ortholog is 100%.
Bootstrap support for E1ZIF0 as seed ortholog is 100%.

Group of orthologs #138. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:477 C.variabilis:477

Q757L9              	100.00%		E1ZPB2              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for E1ZPB2 as seed ortholog is 100%.

Group of orthologs #139. Best score 476 bits
Score difference with first non-orthologous sequence - A.gossypii:365 C.variabilis:476

Q753Y9              	100.00%		E1ZFY2              	100.00%
Bootstrap support for Q753Y9 as seed ortholog is 100%.
Bootstrap support for E1ZFY2 as seed ortholog is 100%.

Group of orthologs #140. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 C.variabilis:475

Q75BE4              	100.00%		E1ZH03              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for E1ZH03 as seed ortholog is 100%.

Group of orthologs #141. Best score 474 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:19

Q74Z12              	100.00%		E1ZG34              	100.00%
Bootstrap support for Q74Z12 as seed ortholog is 98%.
Bootstrap support for E1ZG34 as seed ortholog is 31%.
Alternative seed ortholog is E1ZG84 (19 bits away from this cluster)

Group of orthologs #142. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 C.variabilis:473

Q753N2              	100.00%		E1ZAN0              	100.00%
Bootstrap support for Q753N2 as seed ortholog is 100%.
Bootstrap support for E1ZAN0 as seed ortholog is 100%.

Group of orthologs #143. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:471 C.variabilis:387

Q74ZS6              	100.00%		E1ZQ58              	100.00%
Bootstrap support for Q74ZS6 as seed ortholog is 100%.
Bootstrap support for E1ZQ58 as seed ortholog is 100%.

Group of orthologs #144. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:469 C.variabilis:469

Q753P8              	100.00%		E1ZMG7              	100.00%
Bootstrap support for Q753P8 as seed ortholog is 100%.
Bootstrap support for E1ZMG7 as seed ortholog is 100%.

Group of orthologs #145. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:469 C.variabilis:469

Q751P6              	100.00%		E1ZPE2              	100.00%
Bootstrap support for Q751P6 as seed ortholog is 100%.
Bootstrap support for E1ZPE2 as seed ortholog is 100%.

Group of orthologs #146. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 C.variabilis:467

Q75CS4              	100.00%		E1ZSH7              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for E1ZSH7 as seed ortholog is 100%.

Group of orthologs #147. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:466 C.variabilis:466

Q759A5              	100.00%		E1ZPL7              	100.00%
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for E1ZPL7 as seed ortholog is 100%.

Group of orthologs #148. Best score 463 bits
Score difference with first non-orthologous sequence - A.gossypii:268 C.variabilis:463

Q752H7              	100.00%		E1ZRN5              	100.00%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for E1ZRN5 as seed ortholog is 100%.

Group of orthologs #149. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:462 C.variabilis:188

Q75F64              	100.00%		E1Z5N5              	100.00%
Bootstrap support for Q75F64 as seed ortholog is 100%.
Bootstrap support for E1Z5N5 as seed ortholog is 100%.

Group of orthologs #150. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:314 C.variabilis:375

Q750H4              	100.00%		E1ZHP2              	100.00%
Bootstrap support for Q750H4 as seed ortholog is 100%.
Bootstrap support for E1ZHP2 as seed ortholog is 100%.

Group of orthologs #151. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:460 C.variabilis:460

Q756B7              	100.00%		E1ZD62              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for E1ZD62 as seed ortholog is 100%.

Group of orthologs #152. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:460 C.variabilis:460

Q753K9              	100.00%		E1ZGD1              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 100%.
Bootstrap support for E1ZGD1 as seed ortholog is 100%.

Group of orthologs #153. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 C.variabilis:458

Q754M2              	100.00%		E1Z1X2              	100.00%
Bootstrap support for Q754M2 as seed ortholog is 100%.
Bootstrap support for E1Z1X2 as seed ortholog is 100%.

Group of orthologs #154. Best score 456 bits
Score difference with first non-orthologous sequence - A.gossypii:247 C.variabilis:456

Q74ZC3              	100.00%		E1Z644              	100.00%
Bootstrap support for Q74ZC3 as seed ortholog is 99%.
Bootstrap support for E1Z644 as seed ortholog is 100%.

Group of orthologs #155. Best score 456 bits
Score difference with first non-orthologous sequence - A.gossypii:456 C.variabilis:456

Q751Y3              	100.00%		E1ZE06              	100.00%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for E1ZE06 as seed ortholog is 100%.

Group of orthologs #156. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 C.variabilis:455

Q75BK3              	100.00%		E1Z2I9              	100.00%
                    	       		E1Z3M9              	20.66%
Bootstrap support for Q75BK3 as seed ortholog is 100%.
Bootstrap support for E1Z2I9 as seed ortholog is 100%.

Group of orthologs #157. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:90 C.variabilis:41

Q758Q4              	100.00%		E1ZE07              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 87%.
Bootstrap support for E1ZE07 as seed ortholog is 68%.
Alternative seed ortholog is E1ZE44 (41 bits away from this cluster)

Group of orthologs #158. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:450 C.variabilis:450

Q74Z55              	100.00%		E1ZDA6              	100.00%
Bootstrap support for Q74Z55 as seed ortholog is 100%.
Bootstrap support for E1ZDA6 as seed ortholog is 100%.

Group of orthologs #159. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:449 C.variabilis:449

Q75E56              	100.00%		E1ZD31              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for E1ZD31 as seed ortholog is 100%.

Group of orthologs #160. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:252

Q753X2              	100.00%		E1ZQM9              	100.00%
Bootstrap support for Q753X2 as seed ortholog is 99%.
Bootstrap support for E1ZQM9 as seed ortholog is 100%.

Group of orthologs #161. Best score 447 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:338

Q755B6              	100.00%		E1ZQ40              	100.00%
Bootstrap support for Q755B6 as seed ortholog is 100%.
Bootstrap support for E1ZQ40 as seed ortholog is 100%.

Group of orthologs #162. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 C.variabilis:250

Q750J4              	100.00%		E1ZHX9              	100.00%
Bootstrap support for Q750J4 as seed ortholog is 100%.
Bootstrap support for E1ZHX9 as seed ortholog is 100%.

Group of orthologs #163. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:444 C.variabilis:444

Q756G7              	100.00%		E1Z812              	100.00%
Bootstrap support for Q756G7 as seed ortholog is 100%.
Bootstrap support for E1Z812 as seed ortholog is 100%.

Group of orthologs #164. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:444 C.variabilis:444

Q75BP7              	100.00%		E1ZQB5              	100.00%
Bootstrap support for Q75BP7 as seed ortholog is 100%.
Bootstrap support for E1ZQB5 as seed ortholog is 100%.

Group of orthologs #165. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:219 C.variabilis:442

Q75D98              	100.00%		E1ZLU8              	100.00%
Q750T1              	70.77%		E1ZLU1              	48.02%
Q75D99              	20.39%		E1Z4Y0              	13.28%
                    	       		E1Z2T4              	8.50%
                    	       		E1Z8E8              	6.38%
Bootstrap support for Q75D98 as seed ortholog is 99%.
Bootstrap support for E1ZLU8 as seed ortholog is 100%.

Group of orthologs #166. Best score 439 bits
Score difference with first non-orthologous sequence - A.gossypii:439 C.variabilis:439

Q75C89              	100.00%		E1Z7I9              	100.00%
Bootstrap support for Q75C89 as seed ortholog is 100%.
Bootstrap support for E1Z7I9 as seed ortholog is 100%.

Group of orthologs #167. Best score 438 bits
Score difference with first non-orthologous sequence - A.gossypii:438 C.variabilis:438

Q74ZK6              	100.00%		E1ZSK4              	100.00%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for E1ZSK4 as seed ortholog is 100%.

Group of orthologs #168. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 C.variabilis:435

Q75F08              	100.00%		E1Z2E2              	100.00%
Bootstrap support for Q75F08 as seed ortholog is 100%.
Bootstrap support for E1Z2E2 as seed ortholog is 100%.

Group of orthologs #169. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:189

Q750N5              	100.00%		E1ZSH5              	100.00%
Bootstrap support for Q750N5 as seed ortholog is 99%.
Bootstrap support for E1ZSH5 as seed ortholog is 99%.

Group of orthologs #170. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 C.variabilis:22

Q75E77              	100.00%		E1ZKL7              	100.00%
Bootstrap support for Q75E77 as seed ortholog is 100%.
Bootstrap support for E1ZKL7 as seed ortholog is 70%.
Alternative seed ortholog is E1ZGF1 (22 bits away from this cluster)

Group of orthologs #171. Best score 434 bits
Score difference with first non-orthologous sequence - A.gossypii:434 C.variabilis:434

Q758L0              	100.00%		E1ZJE0              	100.00%
                    	       		E1Z520              	23.80%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for E1ZJE0 as seed ortholog is 100%.

Group of orthologs #172. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:228

Q74ZJ0              	100.00%		E1ZGI3              	100.00%
Bootstrap support for Q74ZJ0 as seed ortholog is 99%.
Bootstrap support for E1ZGI3 as seed ortholog is 100%.

Group of orthologs #173. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:431 C.variabilis:431

Q751X2              	100.00%		E1Z6Q3              	100.00%
Bootstrap support for Q751X2 as seed ortholog is 100%.
Bootstrap support for E1Z6Q3 as seed ortholog is 100%.

Group of orthologs #174. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 C.variabilis:383

Q75C71              	100.00%		E1Z853              	100.00%
Bootstrap support for Q75C71 as seed ortholog is 100%.
Bootstrap support for E1Z853 as seed ortholog is 100%.

Group of orthologs #175. Best score 429 bits
Score difference with first non-orthologous sequence - A.gossypii:429 C.variabilis:429

Q757G0              	100.00%		E1ZF51              	100.00%
Bootstrap support for Q757G0 as seed ortholog is 100%.
Bootstrap support for E1ZF51 as seed ortholog is 100%.

Group of orthologs #176. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:427 C.variabilis:427

Q75A34              	100.00%		E1ZGY3              	100.00%
Q756K2              	7.69%		
Bootstrap support for Q75A34 as seed ortholog is 100%.
Bootstrap support for E1ZGY3 as seed ortholog is 100%.

Group of orthologs #177. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 C.variabilis:327

Q757H0              	100.00%		E1Z4G4              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for E1Z4G4 as seed ortholog is 100%.

Group of orthologs #178. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:424 C.variabilis:247

Q75EN8              	100.00%		E1ZJC4              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for E1ZJC4 as seed ortholog is 100%.

Group of orthologs #179. Best score 423 bits
Score difference with first non-orthologous sequence - A.gossypii:357 C.variabilis:262

Q75EA9              	100.00%		E1ZML0              	100.00%
Bootstrap support for Q75EA9 as seed ortholog is 100%.
Bootstrap support for E1ZML0 as seed ortholog is 100%.

Group of orthologs #180. Best score 422 bits
Score difference with first non-orthologous sequence - A.gossypii:422 C.variabilis:422

Q75CB7              	100.00%		E1ZNZ5              	100.00%
Bootstrap support for Q75CB7 as seed ortholog is 100%.
Bootstrap support for E1ZNZ5 as seed ortholog is 100%.

Group of orthologs #181. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:420 C.variabilis:420

Q757D1              	100.00%		E1Z905              	100.00%
Bootstrap support for Q757D1 as seed ortholog is 100%.
Bootstrap support for E1Z905 as seed ortholog is 100%.

Group of orthologs #182. Best score 420 bits
Score difference with first non-orthologous sequence - A.gossypii:316 C.variabilis:281

Q758Q8              	100.00%		E1ZSU0              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for E1ZSU0 as seed ortholog is 100%.

Group of orthologs #183. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 C.variabilis:418

Q751T0              	100.00%		E1ZJ46              	100.00%
Bootstrap support for Q751T0 as seed ortholog is 100%.
Bootstrap support for E1ZJ46 as seed ortholog is 100%.

Group of orthologs #184. Best score 418 bits
Score difference with first non-orthologous sequence - A.gossypii:418 C.variabilis:418

Q758R9              	100.00%		E1ZQ39              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for E1ZQ39 as seed ortholog is 100%.

Group of orthologs #185. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:414 C.variabilis:64

Q75C31              	100.00%		E1Z2W1              	100.00%
                    	       		E1ZIJ9              	15.01%
Bootstrap support for Q75C31 as seed ortholog is 100%.
Bootstrap support for E1Z2W1 as seed ortholog is 83%.

Group of orthologs #186. Best score 414 bits
Score difference with first non-orthologous sequence - A.gossypii:326 C.variabilis:210

Q756Z1              	100.00%		E1ZBH3              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 100%.
Bootstrap support for E1ZBH3 as seed ortholog is 100%.

Group of orthologs #187. Best score 413 bits
Score difference with first non-orthologous sequence - A.gossypii:273 C.variabilis:295

Q756W4              	100.00%		E1ZQR9              	100.00%
Bootstrap support for Q756W4 as seed ortholog is 100%.
Bootstrap support for E1ZQR9 as seed ortholog is 100%.

Group of orthologs #188. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:411 C.variabilis:330

Q74ZX3              	100.00%		E1Z361              	100.00%
                    	       		E1ZFI5              	10.06%
Bootstrap support for Q74ZX3 as seed ortholog is 100%.
Bootstrap support for E1Z361 as seed ortholog is 100%.

Group of orthologs #189. Best score 411 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:127

Q754C8              	100.00%		E1Z397              	100.00%
Q754P1              	5.81%		
Bootstrap support for Q754C8 as seed ortholog is 85%.
Bootstrap support for E1Z397 as seed ortholog is 99%.

Group of orthologs #190. Best score 410 bits
Score difference with first non-orthologous sequence - A.gossypii:410 C.variabilis:410

Q75A13              	100.00%		E1ZKS5              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for E1ZKS5 as seed ortholog is 100%.

Group of orthologs #191. Best score 409 bits
Score difference with first non-orthologous sequence - A.gossypii:409 C.variabilis:52

Q75EQ4              	100.00%		E1Z5M6              	100.00%
Q75DQ8              	29.05%		
Bootstrap support for Q75EQ4 as seed ortholog is 100%.
Bootstrap support for E1Z5M6 as seed ortholog is 76%.

Group of orthologs #192. Best score 408 bits
Score difference with first non-orthologous sequence - A.gossypii:408 C.variabilis:408

Q752T8              	100.00%		E1ZQ91              	100.00%
Bootstrap support for Q752T8 as seed ortholog is 100%.
Bootstrap support for E1ZQ91 as seed ortholog is 100%.

Group of orthologs #193. Best score 407 bits
Score difference with first non-orthologous sequence - A.gossypii:338 C.variabilis:98

Q74ZV2              	100.00%		E1ZIU9              	100.00%
Bootstrap support for Q74ZV2 as seed ortholog is 100%.
Bootstrap support for E1ZIU9 as seed ortholog is 96%.

Group of orthologs #194. Best score 407 bits
Score difference with first non-orthologous sequence - A.gossypii:407 C.variabilis:178

Q75EB0              	100.00%		E1ZJ58              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for E1ZJ58 as seed ortholog is 100%.

Group of orthologs #195. Best score 406 bits
Score difference with first non-orthologous sequence - A.gossypii:78 C.variabilis:235

Q756Q2              	100.00%		E1ZQV1              	100.00%
Bootstrap support for Q756Q2 as seed ortholog is 99%.
Bootstrap support for E1ZQV1 as seed ortholog is 100%.

Group of orthologs #196. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:246

Q74ZR2              	100.00%		E1ZRE4              	100.00%
Bootstrap support for Q74ZR2 as seed ortholog is 98%.
Bootstrap support for E1ZRE4 as seed ortholog is 100%.

Group of orthologs #197. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:405 C.variabilis:261

Q75BT4              	100.00%		E1ZLJ3              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for E1ZLJ3 as seed ortholog is 100%.

Group of orthologs #198. Best score 404 bits
Score difference with first non-orthologous sequence - A.gossypii:344 C.variabilis:362

Q752H4              	100.00%		E1Z2C9              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for E1Z2C9 as seed ortholog is 100%.

Group of orthologs #199. Best score 403 bits
Score difference with first non-orthologous sequence - A.gossypii:178 C.variabilis:132

Q755A5              	100.00%		E1ZKW0              	100.00%
Bootstrap support for Q755A5 as seed ortholog is 99%.
Bootstrap support for E1ZKW0 as seed ortholog is 99%.

Group of orthologs #200. Best score 402 bits
Score difference with first non-orthologous sequence - A.gossypii:402 C.variabilis:244

Q758U9              	100.00%		E1ZFK9              	100.00%
Bootstrap support for Q758U9 as seed ortholog is 100%.
Bootstrap support for E1ZFK9 as seed ortholog is 100%.

Group of orthologs #201. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:186 C.variabilis:223

Q752Y9              	100.00%		E1Z685              	100.00%
Bootstrap support for Q752Y9 as seed ortholog is 100%.
Bootstrap support for E1Z685 as seed ortholog is 99%.

Group of orthologs #202. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:347 C.variabilis:401

Q75A16              	100.00%		E1Z6M8              	100.00%
Bootstrap support for Q75A16 as seed ortholog is 100%.
Bootstrap support for E1Z6M8 as seed ortholog is 100%.

Group of orthologs #203. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:401 C.variabilis:308

Q759V7              	100.00%		E1ZQ23              	100.00%
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for E1ZQ23 as seed ortholog is 100%.

Group of orthologs #204. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:5 C.variabilis:297

Q75AM5              	100.00%		E1ZRP6              	100.00%
Bootstrap support for Q75AM5 as seed ortholog is 46%.
Alternative seed ortholog is Q759R9 (5 bits away from this cluster)
Bootstrap support for E1ZRP6 as seed ortholog is 100%.

Group of orthologs #205. Best score 401 bits
Score difference with first non-orthologous sequence - A.gossypii:401 C.variabilis:401

Q75BJ2              	100.00%		E1ZQW5              	100.00%
Bootstrap support for Q75BJ2 as seed ortholog is 100%.
Bootstrap support for E1ZQW5 as seed ortholog is 100%.

Group of orthologs #206. Best score 400 bits
Score difference with first non-orthologous sequence - A.gossypii:400 C.variabilis:400

Q753N9              	100.00%		E1ZGX2              	100.00%
Bootstrap support for Q753N9 as seed ortholog is 100%.
Bootstrap support for E1ZGX2 as seed ortholog is 100%.

Group of orthologs #207. Best score 399 bits
Score difference with first non-orthologous sequence - A.gossypii:399 C.variabilis:399

Q753L7              	100.00%		E1ZJR3              	100.00%
Bootstrap support for Q753L7 as seed ortholog is 100%.
Bootstrap support for E1ZJR3 as seed ortholog is 100%.

Group of orthologs #208. Best score 398 bits
Score difference with first non-orthologous sequence - A.gossypii:398 C.variabilis:398

Q750G1              	100.00%		E1Z5G4              	100.00%
Bootstrap support for Q750G1 as seed ortholog is 100%.
Bootstrap support for E1Z5G4 as seed ortholog is 100%.

Group of orthologs #209. Best score 398 bits
Score difference with first non-orthologous sequence - A.gossypii:114 C.variabilis:248

Q757K5              	100.00%		E1Z419              	100.00%
Bootstrap support for Q757K5 as seed ortholog is 99%.
Bootstrap support for E1Z419 as seed ortholog is 100%.

Group of orthologs #210. Best score 396 bits
Score difference with first non-orthologous sequence - A.gossypii:396 C.variabilis:396

Q750X3              	100.00%		E1Z9V4              	100.00%
Bootstrap support for Q750X3 as seed ortholog is 100%.
Bootstrap support for E1Z9V4 as seed ortholog is 100%.

Group of orthologs #211. Best score 396 bits
Score difference with first non-orthologous sequence - A.gossypii:273 C.variabilis:301

Q75AF7              	100.00%		E1Z382              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 100%.
Bootstrap support for E1Z382 as seed ortholog is 100%.

Group of orthologs #212. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:394 C.variabilis:344

Q751I9              	100.00%		E1Z8B3              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for E1Z8B3 as seed ortholog is 100%.

Group of orthologs #213. Best score 394 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:111

Q75AD4              	100.00%		E1Z6P3              	100.00%
Bootstrap support for Q75AD4 as seed ortholog is 99%.
Bootstrap support for E1Z6P3 as seed ortholog is 99%.

Group of orthologs #214. Best score 392 bits
Score difference with first non-orthologous sequence - A.gossypii:392 C.variabilis:392

Q758T5              	100.00%		E1Z229              	100.00%
Bootstrap support for Q758T5 as seed ortholog is 100%.
Bootstrap support for E1Z229 as seed ortholog is 100%.

Group of orthologs #215. Best score 391 bits
Score difference with first non-orthologous sequence - A.gossypii:391 C.variabilis:391

Q755D6              	100.00%		E1Z8W6              	100.00%
Bootstrap support for Q755D6 as seed ortholog is 100%.
Bootstrap support for E1Z8W6 as seed ortholog is 100%.

Group of orthologs #216. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 C.variabilis:218

Q74ZS5              	100.00%		E1ZCW7              	100.00%
Bootstrap support for Q74ZS5 as seed ortholog is 100%.
Bootstrap support for E1ZCW7 as seed ortholog is 100%.

Group of orthologs #217. Best score 389 bits
Score difference with first non-orthologous sequence - A.gossypii:389 C.variabilis:389

Q75D85              	100.00%		E1ZID6              	100.00%
Bootstrap support for Q75D85 as seed ortholog is 100%.
Bootstrap support for E1ZID6 as seed ortholog is 100%.

Group of orthologs #218. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 C.variabilis:104

Q754U8              	100.00%		E1Z4W2              	100.00%
Bootstrap support for Q754U8 as seed ortholog is 100%.
Bootstrap support for E1Z4W2 as seed ortholog is 97%.

Group of orthologs #219. Best score 386 bits
Score difference with first non-orthologous sequence - A.gossypii:386 C.variabilis:52

Q75CM8              	100.00%		E1Z7E9              	100.00%
Bootstrap support for Q75CM8 as seed ortholog is 100%.
Bootstrap support for E1Z7E9 as seed ortholog is 94%.

Group of orthologs #220. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 C.variabilis:385

Q75DP6              	100.00%		E1ZIF7              	100.00%
Bootstrap support for Q75DP6 as seed ortholog is 100%.
Bootstrap support for E1ZIF7 as seed ortholog is 100%.

Group of orthologs #221. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:385 C.variabilis:385

Q75B59              	100.00%		E1ZRW2              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for E1ZRW2 as seed ortholog is 100%.

Group of orthologs #222. Best score 384 bits
Score difference with first non-orthologous sequence - A.gossypii:236 C.variabilis:384

Q74ZS1              	100.00%		E1ZD66              	100.00%
Bootstrap support for Q74ZS1 as seed ortholog is 100%.
Bootstrap support for E1ZD66 as seed ortholog is 100%.

Group of orthologs #223. Best score 381 bits
Score difference with first non-orthologous sequence - A.gossypii:381 C.variabilis:381

Q753X7              	100.00%		E1ZLR0              	100.00%
Bootstrap support for Q753X7 as seed ortholog is 100%.
Bootstrap support for E1ZLR0 as seed ortholog is 100%.

Group of orthologs #224. Best score 379 bits
Score difference with first non-orthologous sequence - A.gossypii:379 C.variabilis:379

Q75CI1              	100.00%		E1Z5I7              	100.00%
Bootstrap support for Q75CI1 as seed ortholog is 100%.
Bootstrap support for E1Z5I7 as seed ortholog is 100%.

Group of orthologs #225. Best score 377 bits
Score difference with first non-orthologous sequence - A.gossypii:377 C.variabilis:377

Q75EW4              	100.00%		E1Z638              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for E1Z638 as seed ortholog is 100%.

Group of orthologs #226. Best score 376 bits
Score difference with first non-orthologous sequence - A.gossypii:376 C.variabilis:376

Q755T1              	100.00%		E1ZT76              	100.00%
Bootstrap support for Q755T1 as seed ortholog is 100%.
Bootstrap support for E1ZT76 as seed ortholog is 100%.

Group of orthologs #227. Best score 375 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:56

Q75A61              	100.00%		E1ZQW0              	100.00%
Bootstrap support for Q75A61 as seed ortholog is 99%.
Bootstrap support for E1ZQW0 as seed ortholog is 94%.

Group of orthologs #228. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:374 C.variabilis:374

Q75DI2              	100.00%		E1ZFA1              	100.00%
Bootstrap support for Q75DI2 as seed ortholog is 100%.
Bootstrap support for E1ZFA1 as seed ortholog is 100%.

Group of orthologs #229. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:373 C.variabilis:373

Q75B10              	100.00%		E1ZC52              	100.00%
                    	       		E1ZD87              	39.57%
Bootstrap support for Q75B10 as seed ortholog is 100%.
Bootstrap support for E1ZC52 as seed ortholog is 100%.

Group of orthologs #230. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:373 C.variabilis:251

Q750E9              	100.00%		E1ZJF7              	100.00%
Bootstrap support for Q750E9 as seed ortholog is 100%.
Bootstrap support for E1ZJF7 as seed ortholog is 100%.

Group of orthologs #231. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:373 C.variabilis:373

Q75DW1              	100.00%		E1ZAA4              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 100%.
Bootstrap support for E1ZAA4 as seed ortholog is 100%.

Group of orthologs #232. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:373 C.variabilis:95

Q758F4              	100.00%		E1ZG20              	100.00%
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for E1ZG20 as seed ortholog is 98%.

Group of orthologs #233. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:135

Q75AM1              	100.00%		E1ZEH9              	100.00%
Bootstrap support for Q75AM1 as seed ortholog is 97%.
Bootstrap support for E1ZEH9 as seed ortholog is 99%.

Group of orthologs #234. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:267 C.variabilis:200

Q759L6              	100.00%		E1ZL31              	100.00%
Bootstrap support for Q759L6 as seed ortholog is 100%.
Bootstrap support for E1ZL31 as seed ortholog is 100%.

Group of orthologs #235. Best score 373 bits
Score difference with first non-orthologous sequence - A.gossypii:373 C.variabilis:373

Q756G8              	100.00%		E1ZQC0              	100.00%
Bootstrap support for Q756G8 as seed ortholog is 100%.
Bootstrap support for E1ZQC0 as seed ortholog is 100%.

Group of orthologs #236. Best score 372 bits
Score difference with first non-orthologous sequence - A.gossypii:315 C.variabilis:284

Q75ET3              	100.00%		E1ZL40              	100.00%
Bootstrap support for Q75ET3 as seed ortholog is 100%.
Bootstrap support for E1ZL40 as seed ortholog is 100%.

Group of orthologs #237. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:104 C.variabilis:371

Q753W1              	100.00%		E1ZR15              	100.00%
                    	       		E1Z4T9              	16.07%
Bootstrap support for Q753W1 as seed ortholog is 99%.
Bootstrap support for E1ZR15 as seed ortholog is 100%.

Group of orthologs #238. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:371 C.variabilis:8

Q75BT9              	100.00%		E1Z5R4              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for E1Z5R4 as seed ortholog is 59%.
Alternative seed ortholog is E1ZAW3 (8 bits away from this cluster)

Group of orthologs #239. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:371 C.variabilis:371

Q75CF4              	100.00%		E1Z5J2              	100.00%
Bootstrap support for Q75CF4 as seed ortholog is 100%.
Bootstrap support for E1Z5J2 as seed ortholog is 100%.

Group of orthologs #240. Best score 371 bits
Score difference with first non-orthologous sequence - A.gossypii:371 C.variabilis:288

Q758M7              	100.00%		E1ZSB4              	100.00%
Bootstrap support for Q758M7 as seed ortholog is 100%.
Bootstrap support for E1ZSB4 as seed ortholog is 100%.

Group of orthologs #241. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:305 C.variabilis:214

Q758J2              	100.00%		E1ZD59              	100.00%
Bootstrap support for Q758J2 as seed ortholog is 100%.
Bootstrap support for E1ZD59 as seed ortholog is 100%.

Group of orthologs #242. Best score 369 bits
Score difference with first non-orthologous sequence - A.gossypii:369 C.variabilis:369

Q759T9              	100.00%		E1ZQ02              	100.00%
Bootstrap support for Q759T9 as seed ortholog is 100%.
Bootstrap support for E1ZQ02 as seed ortholog is 100%.

Group of orthologs #243. Best score 368 bits
Score difference with first non-orthologous sequence - A.gossypii:368 C.variabilis:240

Q750R2              	100.00%		E1ZCL1              	100.00%
Bootstrap support for Q750R2 as seed ortholog is 100%.
Bootstrap support for E1ZCL1 as seed ortholog is 100%.

Group of orthologs #244. Best score 367 bits
Score difference with first non-orthologous sequence - A.gossypii:367 C.variabilis:291

Q75CR7              	100.00%		E1Z348              	100.00%
Bootstrap support for Q75CR7 as seed ortholog is 100%.
Bootstrap support for E1Z348 as seed ortholog is 100%.

Group of orthologs #245. Best score 367 bits
Score difference with first non-orthologous sequence - A.gossypii:367 C.variabilis:367

Q75F62              	100.00%		E1ZLZ2              	100.00%
Bootstrap support for Q75F62 as seed ortholog is 100%.
Bootstrap support for E1ZLZ2 as seed ortholog is 100%.

Group of orthologs #246. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 C.variabilis:94

Q74ZH6              	100.00%		E1ZH10              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for E1ZH10 as seed ortholog is 99%.

Group of orthologs #247. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 C.variabilis:366

Q75BG3              	100.00%		E1Z857              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for E1Z857 as seed ortholog is 100%.

Group of orthologs #248. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 C.variabilis:366

Q759Q4              	100.00%		E1ZCI9              	100.00%
Bootstrap support for Q759Q4 as seed ortholog is 100%.
Bootstrap support for E1ZCI9 as seed ortholog is 100%.

Group of orthologs #249. Best score 366 bits
Score difference with first non-orthologous sequence - A.gossypii:366 C.variabilis:366

Q75AZ9              	100.00%		E1ZFF3              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for E1ZFF3 as seed ortholog is 100%.

Group of orthologs #250. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:249 C.variabilis:259

Q756B9              	100.00%		E1Z8D0              	100.00%
                    	       		E1ZI39              	6.94%
Bootstrap support for Q756B9 as seed ortholog is 100%.
Bootstrap support for E1Z8D0 as seed ortholog is 100%.

Group of orthologs #251. Best score 364 bits
Score difference with first non-orthologous sequence - A.gossypii:211 C.variabilis:93

Q757S7              	100.00%		E1ZH99              	100.00%
Bootstrap support for Q757S7 as seed ortholog is 100%.
Bootstrap support for E1ZH99 as seed ortholog is 95%.

Group of orthologs #252. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:362 C.variabilis:362

Q752V5              	100.00%		E1Z7S5              	100.00%
Bootstrap support for Q752V5 as seed ortholog is 100%.
Bootstrap support for E1Z7S5 as seed ortholog is 100%.

Group of orthologs #253. Best score 362 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:123

Q753V3              	100.00%		E1ZQD5              	100.00%
Bootstrap support for Q753V3 as seed ortholog is 97%.
Bootstrap support for E1ZQD5 as seed ortholog is 96%.

Group of orthologs #254. Best score 359 bits
Score difference with first non-orthologous sequence - A.gossypii:157 C.variabilis:248

Q754N7              	100.00%		E1ZIY2              	100.00%
Bootstrap support for Q754N7 as seed ortholog is 99%.
Bootstrap support for E1ZIY2 as seed ortholog is 100%.

Group of orthologs #255. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:358 C.variabilis:358

Q75DA2              	100.00%		E1Z342              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for E1Z342 as seed ortholog is 100%.

Group of orthologs #256. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 C.variabilis:260

Q753D4              	100.00%		E1Z992              	100.00%
Bootstrap support for Q753D4 as seed ortholog is 100%.
Bootstrap support for E1Z992 as seed ortholog is 99%.

Group of orthologs #257. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 C.variabilis:356

Q75AP7              	100.00%		E1ZD78              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 100%.
Bootstrap support for E1ZD78 as seed ortholog is 100%.

Group of orthologs #258. Best score 356 bits
Score difference with first non-orthologous sequence - A.gossypii:356 C.variabilis:356

Q757B9              	100.00%		E1ZMR9              	100.00%
Bootstrap support for Q757B9 as seed ortholog is 100%.
Bootstrap support for E1ZMR9 as seed ortholog is 100%.

Group of orthologs #259. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 C.variabilis:354

Q757Q0              	100.00%		E1Z453              	100.00%
                    	       		E1Z5A0              	42.04%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for E1Z453 as seed ortholog is 100%.

Group of orthologs #260. Best score 354 bits
Score difference with first non-orthologous sequence - A.gossypii:354 C.variabilis:354

Q752M7              	100.00%		E1ZPG3              	100.00%
Bootstrap support for Q752M7 as seed ortholog is 100%.
Bootstrap support for E1ZPG3 as seed ortholog is 100%.

Group of orthologs #261. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:353

Q750S7              	100.00%		E1Z770              	100.00%
Bootstrap support for Q750S7 as seed ortholog is 100%.
Bootstrap support for E1Z770 as seed ortholog is 100%.

Group of orthologs #262. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:183 C.variabilis:59

P41752              	100.00%		E1ZBK2              	100.00%
Bootstrap support for P41752 as seed ortholog is 99%.
Bootstrap support for E1ZBK2 as seed ortholog is 92%.

Group of orthologs #263. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:353 C.variabilis:353

Q75EK2              	100.00%		E1ZE45              	100.00%
Bootstrap support for Q75EK2 as seed ortholog is 100%.
Bootstrap support for E1ZE45 as seed ortholog is 100%.

Group of orthologs #264. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:352 C.variabilis:352

Q750I3              	100.00%		E1ZG73              	100.00%
Bootstrap support for Q750I3 as seed ortholog is 100%.
Bootstrap support for E1ZG73 as seed ortholog is 100%.

Group of orthologs #265. Best score 352 bits
Score difference with first non-orthologous sequence - A.gossypii:352 C.variabilis:223

Q757N3              	100.00%		E1ZGR2              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for E1ZGR2 as seed ortholog is 100%.

Group of orthologs #266. Best score 351 bits
Score difference with first non-orthologous sequence - A.gossypii:351 C.variabilis:222

Q751B0              	100.00%		E1Z629              	100.00%
Bootstrap support for Q751B0 as seed ortholog is 100%.
Bootstrap support for E1Z629 as seed ortholog is 100%.

Group of orthologs #267. Best score 351 bits
Score difference with first non-orthologous sequence - A.gossypii:351 C.variabilis:351

Q75B31              	100.00%		E1Z8C8              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for E1Z8C8 as seed ortholog is 100%.

Group of orthologs #268. Best score 350 bits
Score difference with first non-orthologous sequence - A.gossypii:350 C.variabilis:350

Q75F55              	100.00%		E1Z2E0              	100.00%
Q74Z46              	5.98%		
Bootstrap support for Q75F55 as seed ortholog is 100%.
Bootstrap support for E1Z2E0 as seed ortholog is 100%.

Group of orthologs #269. Best score 350 bits
Score difference with first non-orthologous sequence - A.gossypii:350 C.variabilis:350

Q74ZU1              	100.00%		E1ZIV3              	100.00%
Bootstrap support for Q74ZU1 as seed ortholog is 100%.
Bootstrap support for E1ZIV3 as seed ortholog is 100%.

Group of orthologs #270. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:9 C.variabilis:78

Q754Q3              	100.00%		E1ZDH8              	100.00%
Q75CV7              	9.74%		E1ZTF5              	8.78%
Bootstrap support for Q754Q3 as seed ortholog is 57%.
Alternative seed ortholog is Q756M2 (9 bits away from this cluster)
Bootstrap support for E1ZDH8 as seed ortholog is 98%.

Group of orthologs #271. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:299 C.variabilis:349

Q755I2              	100.00%		E1ZEN1              	100.00%
Bootstrap support for Q755I2 as seed ortholog is 100%.
Bootstrap support for E1ZEN1 as seed ortholog is 100%.

Group of orthologs #272. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:177

Q759M3              	100.00%		E1ZKN9              	100.00%
Bootstrap support for Q759M3 as seed ortholog is 99%.
Bootstrap support for E1ZKN9 as seed ortholog is 100%.

Group of orthologs #273. Best score 348 bits
Score difference with first non-orthologous sequence - A.gossypii:298 C.variabilis:265

Q75BY3              	100.00%		E1ZQX3              	100.00%
Bootstrap support for Q75BY3 as seed ortholog is 100%.
Bootstrap support for E1ZQX3 as seed ortholog is 100%.

Group of orthologs #274. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:130 C.variabilis:102

Q750C0              	100.00%		E1ZE21              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 98%.
Bootstrap support for E1ZE21 as seed ortholog is 86%.

Group of orthologs #275. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:110 C.variabilis:347

Q754S8              	100.00%		E1ZSC0              	100.00%
Bootstrap support for Q754S8 as seed ortholog is 99%.
Bootstrap support for E1ZSC0 as seed ortholog is 100%.

Group of orthologs #276. Best score 347 bits
Score difference with first non-orthologous sequence - A.gossypii:347 C.variabilis:347

Q75CI2              	100.00%		E1ZNL0              	100.00%
Bootstrap support for Q75CI2 as seed ortholog is 100%.
Bootstrap support for E1ZNL0 as seed ortholog is 100%.

Group of orthologs #277. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 C.variabilis:346

Q75A43              	100.00%		E1Z269              	100.00%
Bootstrap support for Q75A43 as seed ortholog is 100%.
Bootstrap support for E1Z269 as seed ortholog is 100%.

Group of orthologs #278. Best score 346 bits
Score difference with first non-orthologous sequence - A.gossypii:346 C.variabilis:346

Q75AE7              	100.00%		E1Z710              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for E1Z710 as seed ortholog is 100%.

Group of orthologs #279. Best score 345 bits
Score difference with first non-orthologous sequence - A.gossypii:26 C.variabilis:345

Q754D3              	100.00%		E1ZA98              	100.00%
Bootstrap support for Q754D3 as seed ortholog is 76%.
Bootstrap support for E1ZA98 as seed ortholog is 100%.

Group of orthologs #280. Best score 344 bits
Score difference with first non-orthologous sequence - A.gossypii:344 C.variabilis:37

Q756A3              	100.00%		E1Z4P6              	100.00%
Bootstrap support for Q756A3 as seed ortholog is 100%.
Bootstrap support for E1Z4P6 as seed ortholog is 83%.

Group of orthologs #281. Best score 343 bits
Score difference with first non-orthologous sequence - A.gossypii:343 C.variabilis:343

Q75CV3              	100.00%		E1ZFK6              	100.00%
Bootstrap support for Q75CV3 as seed ortholog is 100%.
Bootstrap support for E1ZFK6 as seed ortholog is 100%.

Group of orthologs #282. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:342 C.variabilis:278

Q752F4              	100.00%		E1ZE94              	100.00%
Bootstrap support for Q752F4 as seed ortholog is 100%.
Bootstrap support for E1ZE94 as seed ortholog is 100%.

Group of orthologs #283. Best score 342 bits
Score difference with first non-orthologous sequence - A.gossypii:256 C.variabilis:250

Q74ZA9              	100.00%		E1ZJ35              	100.00%
Bootstrap support for Q74ZA9 as seed ortholog is 100%.
Bootstrap support for E1ZJ35 as seed ortholog is 100%.

Group of orthologs #284. Best score 341 bits
Score difference with first non-orthologous sequence - A.gossypii:132 C.variabilis:104

Q750G3              	100.00%		E1ZP80              	100.00%
Bootstrap support for Q750G3 as seed ortholog is 93%.
Bootstrap support for E1ZP80 as seed ortholog is 97%.

Group of orthologs #285. Best score 338 bits
Score difference with first non-orthologous sequence - A.gossypii:338 C.variabilis:338

Q75BC3              	100.00%		E1Z3P2              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for E1Z3P2 as seed ortholog is 100%.

Group of orthologs #286. Best score 337 bits
Score difference with first non-orthologous sequence - A.gossypii:263 C.variabilis:215

Q75BN9              	100.00%		E1ZJN7              	100.00%
                    	       		E1ZM35              	11.89%
                    	       		E1ZQN7              	10.24%
Bootstrap support for Q75BN9 as seed ortholog is 100%.
Bootstrap support for E1ZJN7 as seed ortholog is 100%.

Group of orthologs #287. Best score 337 bits
Score difference with first non-orthologous sequence - A.gossypii:337 C.variabilis:337

Q753S2              	100.00%		E1Z5T2              	100.00%
Bootstrap support for Q753S2 as seed ortholog is 100%.
Bootstrap support for E1Z5T2 as seed ortholog is 100%.

Group of orthologs #288. Best score 337 bits
Score difference with first non-orthologous sequence - A.gossypii:337 C.variabilis:337

Q754E7              	100.00%		E1ZPY7              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for E1ZPY7 as seed ortholog is 100%.

Group of orthologs #289. Best score 336 bits
Score difference with first non-orthologous sequence - A.gossypii:336 C.variabilis:336

Q75E89              	100.00%		E1ZSM6              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for E1ZSM6 as seed ortholog is 100%.

Group of orthologs #290. Best score 334 bits
Score difference with first non-orthologous sequence - A.gossypii:334 C.variabilis:77

Q750Z9              	100.00%		E1ZEU7              	100.00%
                    	       		E1ZKA9              	5.50%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for E1ZEU7 as seed ortholog is 92%.

Group of orthologs #291. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:269

Q759X1              	100.00%		E1Z349              	100.00%
                    	       		E1Z6N4              	17.19%
                    	       		E1ZRS4              	11.25%
Bootstrap support for Q759X1 as seed ortholog is 96%.
Bootstrap support for E1Z349 as seed ortholog is 100%.

Group of orthologs #292. Best score 333 bits
Score difference with first non-orthologous sequence - A.gossypii:333 C.variabilis:333

Q750M9              	100.00%		E1Z3A5              	100.00%
                    	       		E1ZGM2              	26.58%
Bootstrap support for Q750M9 as seed ortholog is 100%.
Bootstrap support for E1Z3A5 as seed ortholog is 100%.

Group of orthologs #293. Best score 332 bits
Score difference with first non-orthologous sequence - A.gossypii:292 C.variabilis:231

Q753X3              	100.00%		E1ZDM9              	100.00%
Bootstrap support for Q753X3 as seed ortholog is 100%.
Bootstrap support for E1ZDM9 as seed ortholog is 100%.

Group of orthologs #294. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:121

Q752X1              	100.00%		E1Z385              	100.00%
Bootstrap support for Q752X1 as seed ortholog is 99%.
Bootstrap support for E1Z385 as seed ortholog is 99%.

Group of orthologs #295. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:331 C.variabilis:331

Q75C13              	100.00%		E1ZT19              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for E1ZT19 as seed ortholog is 100%.

Group of orthologs #296. Best score 330 bits
Score difference with first non-orthologous sequence - A.gossypii:330 C.variabilis:330

Q754D6              	100.00%		E1ZS72              	100.00%
Bootstrap support for Q754D6 as seed ortholog is 100%.
Bootstrap support for E1ZS72 as seed ortholog is 100%.

Group of orthologs #297. Best score 329 bits
Score difference with first non-orthologous sequence - A.gossypii:231 C.variabilis:329

Q758V2              	100.00%		E1Z373              	100.00%
Bootstrap support for Q758V2 as seed ortholog is 100%.
Bootstrap support for E1Z373 as seed ortholog is 100%.

Group of orthologs #298. Best score 328 bits
Score difference with first non-orthologous sequence - A.gossypii:328 C.variabilis:121

Q74ZU5              	100.00%		E1ZS11              	100.00%
                    	       		E1ZKJ2              	35.94%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for E1ZS11 as seed ortholog is 99%.

Group of orthologs #299. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 C.variabilis:150

Q753L0              	100.00%		E1ZAL1              	100.00%
                    	       		E1ZAL2              	40.53%
Bootstrap support for Q753L0 as seed ortholog is 100%.
Bootstrap support for E1ZAL1 as seed ortholog is 99%.

Group of orthologs #300. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 C.variabilis:61

Q750R4              	100.00%		E1ZPG4              	100.00%
Bootstrap support for Q750R4 as seed ortholog is 100%.
Bootstrap support for E1ZPG4 as seed ortholog is 94%.

Group of orthologs #301. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:323 C.variabilis:323

Q753Q6              	100.00%		E1Z6J7              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 100%.
Bootstrap support for E1Z6J7 as seed ortholog is 100%.

Group of orthologs #302. Best score 323 bits
Score difference with first non-orthologous sequence - A.gossypii:323 C.variabilis:185

Q75AW5              	100.00%		E1Z4S4              	100.00%
Bootstrap support for Q75AW5 as seed ortholog is 100%.
Bootstrap support for E1Z4S4 as seed ortholog is 99%.

Group of orthologs #303. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 C.variabilis:322

Q757G4              	100.00%		E1Z2S0              	100.00%
Bootstrap support for Q757G4 as seed ortholog is 100%.
Bootstrap support for E1Z2S0 as seed ortholog is 100%.

Group of orthologs #304. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 C.variabilis:322

Q758F6              	100.00%		E1Z712              	100.00%
Bootstrap support for Q758F6 as seed ortholog is 100%.
Bootstrap support for E1Z712 as seed ortholog is 100%.

Group of orthologs #305. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 C.variabilis:322

Q75AR1              	100.00%		E1Z9W4              	100.00%
Bootstrap support for Q75AR1 as seed ortholog is 100%.
Bootstrap support for E1Z9W4 as seed ortholog is 100%.

Group of orthologs #306. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 C.variabilis:322

Q75CG9              	100.00%		E1ZEY3              	100.00%
Bootstrap support for Q75CG9 as seed ortholog is 100%.
Bootstrap support for E1ZEY3 as seed ortholog is 100%.

Group of orthologs #307. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:322 C.variabilis:322

Q758H4              	100.00%		E1ZQ83              	100.00%
Bootstrap support for Q758H4 as seed ortholog is 100%.
Bootstrap support for E1ZQ83 as seed ortholog is 100%.

Group of orthologs #308. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 C.variabilis:321

Q75B86              	100.00%		E1ZGE3              	100.00%
Bootstrap support for Q75B86 as seed ortholog is 100%.
Bootstrap support for E1ZGE3 as seed ortholog is 100%.

Group of orthologs #309. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 C.variabilis:321

Q759J7              	100.00%		E1ZQM6              	100.00%
Bootstrap support for Q759J7 as seed ortholog is 100%.
Bootstrap support for E1ZQM6 as seed ortholog is 100%.

Group of orthologs #310. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:320

Q75A55              	100.00%		E1Z3T9              	100.00%
Bootstrap support for Q75A55 as seed ortholog is 99%.
Bootstrap support for E1Z3T9 as seed ortholog is 100%.

Group of orthologs #311. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:197 C.variabilis:320

Q752E9              	100.00%		E1ZPX3              	100.00%
Bootstrap support for Q752E9 as seed ortholog is 99%.
Bootstrap support for E1ZPX3 as seed ortholog is 100%.

Group of orthologs #312. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:244 C.variabilis:319

Q75B77              	100.00%		E1Z8H9              	100.00%
Bootstrap support for Q75B77 as seed ortholog is 100%.
Bootstrap support for E1Z8H9 as seed ortholog is 100%.

Group of orthologs #313. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 C.variabilis:319

Q752W7              	100.00%		E1ZFN1              	100.00%
Bootstrap support for Q752W7 as seed ortholog is 100%.
Bootstrap support for E1ZFN1 as seed ortholog is 100%.

Group of orthologs #314. Best score 319 bits
Score difference with first non-orthologous sequence - A.gossypii:319 C.variabilis:243

Q753Q1              	100.00%		E1ZGN0              	100.00%
Bootstrap support for Q753Q1 as seed ortholog is 100%.
Bootstrap support for E1ZGN0 as seed ortholog is 100%.

Group of orthologs #315. Best score 318 bits
Score difference with first non-orthologous sequence - A.gossypii:318 C.variabilis:318

Q751S5              	100.00%		E1ZQR3              	100.00%
Bootstrap support for Q751S5 as seed ortholog is 100%.
Bootstrap support for E1ZQR3 as seed ortholog is 100%.

Group of orthologs #316. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 C.variabilis:317

Q756M4              	100.00%		E1ZF33              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for E1ZF33 as seed ortholog is 100%.

Group of orthologs #317. Best score 317 bits
Score difference with first non-orthologous sequence - A.gossypii:317 C.variabilis:317

Q75C90              	100.00%		E1ZGC2              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for E1ZGC2 as seed ortholog is 100%.

Group of orthologs #318. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 C.variabilis:316

Q757Y2              	100.00%		E1Z2N1              	100.00%
Bootstrap support for Q757Y2 as seed ortholog is 100%.
Bootstrap support for E1Z2N1 as seed ortholog is 100%.

Group of orthologs #319. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 C.variabilis:316

Q757D2              	100.00%		E1Z5B1              	100.00%
Bootstrap support for Q757D2 as seed ortholog is 100%.
Bootstrap support for E1Z5B1 as seed ortholog is 100%.

Group of orthologs #320. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 C.variabilis:227

Q75A83              	100.00%		E1Z473              	100.00%
Bootstrap support for Q75A83 as seed ortholog is 100%.
Bootstrap support for E1Z473 as seed ortholog is 100%.

Group of orthologs #321. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 C.variabilis:316

Q75BE2              	100.00%		E1ZEB6              	100.00%
Bootstrap support for Q75BE2 as seed ortholog is 100%.
Bootstrap support for E1ZEB6 as seed ortholog is 100%.

Group of orthologs #322. Best score 314 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:314

Q75BY2              	100.00%		E1Z613              	100.00%
Bootstrap support for Q75BY2 as seed ortholog is 99%.
Bootstrap support for E1Z613 as seed ortholog is 100%.

Group of orthologs #323. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:75 C.variabilis:151

Q754X6              	100.00%		E1ZFC7              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 96%.
Bootstrap support for E1ZFC7 as seed ortholog is 99%.

Group of orthologs #324. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 C.variabilis:70

Q751Z2              	100.00%		E1ZP82              	100.00%
Q75C94              	21.08%		E1ZIK2              	5.98%
Bootstrap support for Q751Z2 as seed ortholog is 100%.
Bootstrap support for E1ZP82 as seed ortholog is 91%.

Group of orthologs #325. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 C.variabilis:311

Q750C5              	100.00%		E1Z8V6              	100.00%
                    	       		E1ZSV1              	50.38%
Bootstrap support for Q750C5 as seed ortholog is 100%.
Bootstrap support for E1Z8V6 as seed ortholog is 100%.

Group of orthologs #326. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 C.variabilis:311

Q753J9              	100.00%		E1Z4J0              	100.00%
Bootstrap support for Q753J9 as seed ortholog is 100%.
Bootstrap support for E1Z4J0 as seed ortholog is 100%.

Group of orthologs #327. Best score 311 bits
Score difference with first non-orthologous sequence - A.gossypii:311 C.variabilis:311

Q757M8              	100.00%		E1Z9Q2              	100.00%
Bootstrap support for Q757M8 as seed ortholog is 100%.
Bootstrap support for E1Z9Q2 as seed ortholog is 100%.

Group of orthologs #328. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 C.variabilis:310

Q757P6              	100.00%		E1ZFJ9              	100.00%
Bootstrap support for Q757P6 as seed ortholog is 100%.
Bootstrap support for E1ZFJ9 as seed ortholog is 100%.

Group of orthologs #329. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 C.variabilis:85

Q74ZE6              	100.00%		E1ZMP5              	100.00%
Bootstrap support for Q74ZE6 as seed ortholog is 100%.
Bootstrap support for E1ZMP5 as seed ortholog is 98%.

Group of orthologs #330. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:310 C.variabilis:310

Q754V9              	100.00%		E1ZQ60              	100.00%
Bootstrap support for Q754V9 as seed ortholog is 100%.
Bootstrap support for E1ZQ60 as seed ortholog is 100%.

Group of orthologs #331. Best score 310 bits
Score difference with first non-orthologous sequence - A.gossypii:154 C.variabilis:219

Q75DS8              	100.00%		E1ZTU8              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 99%.
Bootstrap support for E1ZTU8 as seed ortholog is 100%.

Group of orthologs #332. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 C.variabilis:309

Q75E23              	100.00%		E1ZTV3              	100.00%
Q758F2              	12.97%		E1ZKV6              	39.27%
Bootstrap support for Q75E23 as seed ortholog is 100%.
Bootstrap support for E1ZTV3 as seed ortholog is 100%.

Group of orthologs #333. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 C.variabilis:107

Q751B3              	100.00%		E1ZIK6              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for E1ZIK6 as seed ortholog is 99%.

Group of orthologs #334. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 C.variabilis:309

Q758K7              	100.00%		E1ZEQ5              	100.00%
Bootstrap support for Q758K7 as seed ortholog is 100%.
Bootstrap support for E1ZEQ5 as seed ortholog is 100%.

Group of orthologs #335. Best score 309 bits
Score difference with first non-orthologous sequence - A.gossypii:309 C.variabilis:309

Q755Y6              	100.00%		E1ZPM4              	100.00%
Bootstrap support for Q755Y6 as seed ortholog is 100%.
Bootstrap support for E1ZPM4 as seed ortholog is 100%.

Group of orthologs #336. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:85 C.variabilis:307

Q750D4              	100.00%		E1Z4C1              	100.00%
Bootstrap support for Q750D4 as seed ortholog is 98%.
Bootstrap support for E1Z4C1 as seed ortholog is 100%.

Group of orthologs #337. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:27 C.variabilis:124

Q756G5              	100.00%		E1Z627              	100.00%
Bootstrap support for Q756G5 as seed ortholog is 76%.
Bootstrap support for E1Z627 as seed ortholog is 99%.

Group of orthologs #338. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 C.variabilis:307

Q759G6              	100.00%		E1ZE62              	100.00%
Bootstrap support for Q759G6 as seed ortholog is 100%.
Bootstrap support for E1ZE62 as seed ortholog is 100%.

Group of orthologs #339. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:74

Q75A26              	100.00%		E1ZL24              	100.00%
Bootstrap support for Q75A26 as seed ortholog is 100%.
Bootstrap support for E1ZL24 as seed ortholog is 99%.

Group of orthologs #340. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 C.variabilis:305

Q751N1              	100.00%		E1Z472              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for E1Z472 as seed ortholog is 100%.

Group of orthologs #341. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 C.variabilis:247

Q75CI8              	100.00%		E1Z576              	100.00%
Bootstrap support for Q75CI8 as seed ortholog is 100%.
Bootstrap support for E1Z576 as seed ortholog is 100%.

Group of orthologs #342. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 C.variabilis:62

Q756R4              	100.00%		E1ZLR3              	100.00%
Bootstrap support for Q756R4 as seed ortholog is 100%.
Bootstrap support for E1ZLR3 as seed ortholog is 97%.

Group of orthologs #343. Best score 305 bits
Score difference with first non-orthologous sequence - A.gossypii:305 C.variabilis:305

Q756V5              	100.00%		E1ZMW3              	100.00%
Bootstrap support for Q756V5 as seed ortholog is 100%.
Bootstrap support for E1ZMW3 as seed ortholog is 100%.

Group of orthologs #344. Best score 304 bits
Score difference with first non-orthologous sequence - A.gossypii:304 C.variabilis:304

Q75F65              	100.00%		E1ZE87              	100.00%
Bootstrap support for Q75F65 as seed ortholog is 100%.
Bootstrap support for E1ZE87 as seed ortholog is 100%.

Group of orthologs #345. Best score 303 bits
Score difference with first non-orthologous sequence - A.gossypii:303 C.variabilis:303

Q758F8              	100.00%		E1ZCQ9              	100.00%
Bootstrap support for Q758F8 as seed ortholog is 100%.
Bootstrap support for E1ZCQ9 as seed ortholog is 100%.

Group of orthologs #346. Best score 302 bits
Score difference with first non-orthologous sequence - A.gossypii:302 C.variabilis:196

Q755P9              	100.00%		E1ZJ29              	100.00%
Bootstrap support for Q755P9 as seed ortholog is 100%.
Bootstrap support for E1ZJ29 as seed ortholog is 99%.

Group of orthologs #347. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:301 C.variabilis:301

O94198              	100.00%		E1Z1Z7              	100.00%
Q750K8              	10.95%		
Bootstrap support for O94198 as seed ortholog is 100%.
Bootstrap support for E1Z1Z7 as seed ortholog is 100%.

Group of orthologs #348. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:205

Q754W9              	100.00%		E1ZEF4              	100.00%
Bootstrap support for Q754W9 as seed ortholog is 100%.
Bootstrap support for E1ZEF4 as seed ortholog is 99%.

Group of orthologs #349. Best score 300 bits
Score difference with first non-orthologous sequence - A.gossypii:300 C.variabilis:300

Q75D13              	100.00%		E1ZK76              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 100%.
Bootstrap support for E1ZK76 as seed ortholog is 100%.

Group of orthologs #350. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 C.variabilis:299

Q751E6              	100.00%		E1Z5S3              	100.00%
                    	       		E1ZHC1              	9.77%
Bootstrap support for Q751E6 as seed ortholog is 100%.
Bootstrap support for E1Z5S3 as seed ortholog is 100%.

Group of orthologs #351. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 C.variabilis:299

Q757W9              	100.00%		E1ZMY1              	100.00%
Bootstrap support for Q757W9 as seed ortholog is 100%.
Bootstrap support for E1ZMY1 as seed ortholog is 100%.

Group of orthologs #352. Best score 299 bits
Score difference with first non-orthologous sequence - A.gossypii:299 C.variabilis:299

Q75E11              	100.00%		E1ZQW2              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for E1ZQW2 as seed ortholog is 100%.

Group of orthologs #353. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 C.variabilis:157

Q750C1              	100.00%		E1Z970              	100.00%
Bootstrap support for Q750C1 as seed ortholog is 100%.
Bootstrap support for E1Z970 as seed ortholog is 99%.

Group of orthologs #354. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 C.variabilis:298

Q74ZF8              	100.00%		E1ZGT8              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for E1ZGT8 as seed ortholog is 100%.

Group of orthologs #355. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 C.variabilis:298

Q75DZ9              	100.00%		E1ZGQ3              	100.00%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for E1ZGQ3 as seed ortholog is 100%.

Group of orthologs #356. Best score 297 bits
Score difference with first non-orthologous sequence - A.gossypii:179 C.variabilis:297

Q756H0              	100.00%		E1ZN67              	100.00%
Bootstrap support for Q756H0 as seed ortholog is 100%.
Bootstrap support for E1ZN67 as seed ortholog is 100%.

Group of orthologs #357. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:92

Q759V4              	100.00%		E1ZEZ8              	100.00%
Bootstrap support for Q759V4 as seed ortholog is 47%.
Alternative seed ortholog is Q74ZT2 (82 bits away from this cluster)
Bootstrap support for E1ZEZ8 as seed ortholog is 96%.

Group of orthologs #358. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 C.variabilis:296

Q759R3              	100.00%		E1ZFJ7              	100.00%
Bootstrap support for Q759R3 as seed ortholog is 100%.
Bootstrap support for E1ZFJ7 as seed ortholog is 100%.

Group of orthologs #359. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:203 C.variabilis:85

Q75AW1              	100.00%		E1ZHK2              	100.00%
Bootstrap support for Q75AW1 as seed ortholog is 100%.
Bootstrap support for E1ZHK2 as seed ortholog is 96%.

Group of orthologs #360. Best score 296 bits
Score difference with first non-orthologous sequence - A.gossypii:296 C.variabilis:296

Q759R5              	100.00%		E1ZJQ7              	100.00%
Bootstrap support for Q759R5 as seed ortholog is 100%.
Bootstrap support for E1ZJQ7 as seed ortholog is 100%.

Group of orthologs #361. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:157 C.variabilis:148

Q74ZC1              	100.00%		E1ZFF9              	100.00%
Bootstrap support for Q74ZC1 as seed ortholog is 99%.
Bootstrap support for E1ZFF9 as seed ortholog is 99%.

Group of orthologs #362. Best score 295 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:131

Q753V5              	100.00%		E1ZIK5              	100.00%
Bootstrap support for Q753V5 as seed ortholog is 77%.
Bootstrap support for E1ZIK5 as seed ortholog is 98%.

Group of orthologs #363. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 C.variabilis:139

Q74ZK4              	100.00%		E1ZC73              	100.00%
                    	       		E1ZMA6              	18.01%
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for E1ZC73 as seed ortholog is 99%.

Group of orthologs #364. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:188 C.variabilis:294

Q74ZW3              	100.00%		E1ZEJ9              	100.00%
Bootstrap support for Q74ZW3 as seed ortholog is 99%.
Bootstrap support for E1ZEJ9 as seed ortholog is 100%.

Group of orthologs #365. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 C.variabilis:66

Q752Z5              	100.00%		E1ZKM6              	100.00%
Bootstrap support for Q752Z5 as seed ortholog is 100%.
Bootstrap support for E1ZKM6 as seed ortholog is 97%.

Group of orthologs #366. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 C.variabilis:294

Q753V8              	100.00%		E1ZLE6              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for E1ZLE6 as seed ortholog is 100%.

Group of orthologs #367. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:294 C.variabilis:209

Q75EA0              	100.00%		E1ZJL5              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for E1ZJL5 as seed ortholog is 100%.

Group of orthologs #368. Best score 293 bits
Score difference with first non-orthologous sequence - A.gossypii:293 C.variabilis:232

Q75F99              	100.00%		E1ZQG8              	100.00%
Bootstrap support for Q75F99 as seed ortholog is 100%.
Bootstrap support for E1ZQG8 as seed ortholog is 99%.

Group of orthologs #369. Best score 291 bits
Score difference with first non-orthologous sequence - A.gossypii:291 C.variabilis:291

Q754H5              	100.00%		E1ZJV7              	100.00%
                    	       		E1ZSK0              	37.16%
Bootstrap support for Q754H5 as seed ortholog is 100%.
Bootstrap support for E1ZJV7 as seed ortholog is 100%.

Group of orthologs #370. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:133

Q751M5              	100.00%		E1ZPW3              	100.00%
Q757J1              	24.83%		
Bootstrap support for Q751M5 as seed ortholog is 99%.
Bootstrap support for E1ZPW3 as seed ortholog is 99%.

Group of orthologs #371. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 C.variabilis:290

Q751G2              	100.00%		E1ZF83              	100.00%
Bootstrap support for Q751G2 as seed ortholog is 100%.
Bootstrap support for E1ZF83 as seed ortholog is 100%.

Group of orthologs #372. Best score 290 bits
Score difference with first non-orthologous sequence - A.gossypii:290 C.variabilis:233

Q75A46              	100.00%		E1ZBN4              	100.00%
Bootstrap support for Q75A46 as seed ortholog is 100%.
Bootstrap support for E1ZBN4 as seed ortholog is 100%.

Group of orthologs #373. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 C.variabilis:110

Q751R9              	100.00%		E1ZH67              	100.00%
Bootstrap support for Q751R9 as seed ortholog is 100%.
Bootstrap support for E1ZH67 as seed ortholog is 99%.

Group of orthologs #374. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:289 C.variabilis:183

Q756N6              	100.00%		E1ZIC8              	100.00%
Bootstrap support for Q756N6 as seed ortholog is 100%.
Bootstrap support for E1ZIC8 as seed ortholog is 99%.

Group of orthologs #375. Best score 289 bits
Score difference with first non-orthologous sequence - A.gossypii:178 C.variabilis:138

Q756S0              	100.00%		E1ZK10              	100.00%
Bootstrap support for Q756S0 as seed ortholog is 100%.
Bootstrap support for E1ZK10 as seed ortholog is 100%.

Group of orthologs #376. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:288 C.variabilis:288

Q759C6              	100.00%		E1Z8M1              	100.00%
Bootstrap support for Q759C6 as seed ortholog is 100%.
Bootstrap support for E1Z8M1 as seed ortholog is 100%.

Group of orthologs #377. Best score 288 bits
Score difference with first non-orthologous sequence - A.gossypii:25 C.variabilis:122

Q75CH8              	100.00%		E1Z5X5              	100.00%
Bootstrap support for Q75CH8 as seed ortholog is 67%.
Alternative seed ortholog is Q758U3 (25 bits away from this cluster)
Bootstrap support for E1Z5X5 as seed ortholog is 99%.

Group of orthologs #378. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 C.variabilis:287

Q74ZR4              	100.00%		E1Z9U2              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for E1Z9U2 as seed ortholog is 100%.

Group of orthologs #379. Best score 287 bits
Score difference with first non-orthologous sequence - A.gossypii:287 C.variabilis:287

Q75CI4              	100.00%		E1ZE49              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for E1ZE49 as seed ortholog is 100%.

Group of orthologs #380. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:90

Q75B34              	100.00%		E1Z452              	100.00%
Bootstrap support for Q75B34 as seed ortholog is 98%.
Bootstrap support for E1Z452 as seed ortholog is 98%.

Group of orthologs #381. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 C.variabilis:285

Q755D9              	100.00%		E1Z8E4              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for E1Z8E4 as seed ortholog is 100%.

Group of orthologs #382. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 C.variabilis:285

Q75CA8              	100.00%		E1Z6Q8              	100.00%
Bootstrap support for Q75CA8 as seed ortholog is 100%.
Bootstrap support for E1Z6Q8 as seed ortholog is 100%.

Group of orthologs #383. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 C.variabilis:285

Q74ZQ3              	100.00%		E1ZL06              	100.00%
Bootstrap support for Q74ZQ3 as seed ortholog is 100%.
Bootstrap support for E1ZL06 as seed ortholog is 100%.

Group of orthologs #384. Best score 285 bits
Score difference with first non-orthologous sequence - A.gossypii:285 C.variabilis:285

Q75DL9              	100.00%		E1ZEM3              	100.00%
Bootstrap support for Q75DL9 as seed ortholog is 100%.
Bootstrap support for E1ZEM3 as seed ortholog is 100%.

Group of orthologs #385. Best score 283 bits
Score difference with first non-orthologous sequence - A.gossypii:283 C.variabilis:283

Q750H0              	100.00%		E1Z8V2              	100.00%
Bootstrap support for Q750H0 as seed ortholog is 100%.
Bootstrap support for E1Z8V2 as seed ortholog is 100%.

Group of orthologs #386. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 C.variabilis:282

Q756I7              	100.00%		E1Z702              	100.00%
Bootstrap support for Q756I7 as seed ortholog is 100%.
Bootstrap support for E1Z702 as seed ortholog is 100%.

Group of orthologs #387. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 C.variabilis:282

Q75CU7              	100.00%		E1Z866              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for E1Z866 as seed ortholog is 100%.

Group of orthologs #388. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:282

Q753J4              	100.00%		E1ZHW7              	100.00%
Bootstrap support for Q753J4 as seed ortholog is 100%.
Bootstrap support for E1ZHW7 as seed ortholog is 100%.

Group of orthologs #389. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 C.variabilis:282

Q752D6              	100.00%		E1ZLU6              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for E1ZLU6 as seed ortholog is 100%.

Group of orthologs #390. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 C.variabilis:282

Q755E4              	100.00%		E1ZLD4              	100.00%
Bootstrap support for Q755E4 as seed ortholog is 100%.
Bootstrap support for E1ZLD4 as seed ortholog is 100%.

Group of orthologs #391. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 C.variabilis:282

Q759R0              	100.00%		E1ZKX5              	100.00%
Bootstrap support for Q759R0 as seed ortholog is 100%.
Bootstrap support for E1ZKX5 as seed ortholog is 100%.

Group of orthologs #392. Best score 282 bits
Score difference with first non-orthologous sequence - A.gossypii:282 C.variabilis:282

Q75A48              	100.00%		E1ZM33              	100.00%
Bootstrap support for Q75A48 as seed ortholog is 100%.
Bootstrap support for E1ZM33 as seed ortholog is 100%.

Group of orthologs #393. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:281

Q75ER7              	100.00%		E1ZGL8              	100.00%
Bootstrap support for Q75ER7 as seed ortholog is 100%.
Bootstrap support for E1ZGL8 as seed ortholog is 100%.

Group of orthologs #394. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 C.variabilis:281

Q756N5              	100.00%		E1ZT55              	100.00%
Bootstrap support for Q756N5 as seed ortholog is 100%.
Bootstrap support for E1ZT55 as seed ortholog is 100%.

Group of orthologs #395. Best score 280 bits
Score difference with first non-orthologous sequence - A.gossypii:136 C.variabilis:86

Q755C4              	100.00%		E1Z7C1              	100.00%
Bootstrap support for Q755C4 as seed ortholog is 99%.
Bootstrap support for E1Z7C1 as seed ortholog is 98%.

Group of orthologs #396. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:31

Q755B5              	100.00%		E1Z5I2              	100.00%
Q758E1              	54.86%		
Bootstrap support for Q755B5 as seed ortholog is 99%.
Bootstrap support for E1Z5I2 as seed ortholog is 81%.

Group of orthologs #397. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 C.variabilis:279

Q757C6              	100.00%		E1ZEQ4              	100.00%
Bootstrap support for Q757C6 as seed ortholog is 100%.
Bootstrap support for E1ZEQ4 as seed ortholog is 100%.

Group of orthologs #398. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 C.variabilis:279

Q75F11              	100.00%		E1ZIX7              	100.00%
Bootstrap support for Q75F11 as seed ortholog is 100%.
Bootstrap support for E1ZIX7 as seed ortholog is 100%.

Group of orthologs #399. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:278 C.variabilis:189

Q75DN5              	100.00%		E1Z2H7              	100.00%
                    	       		E1Z5Z3              	19.08%
                    	       		E1ZCE4              	18.27%
Bootstrap support for Q75DN5 as seed ortholog is 100%.
Bootstrap support for E1Z2H7 as seed ortholog is 99%.

Group of orthologs #400. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:198 C.variabilis:278

Q75CN5              	100.00%		E1Z4Y7              	100.00%
Bootstrap support for Q75CN5 as seed ortholog is 99%.
Bootstrap support for E1Z4Y7 as seed ortholog is 100%.

Group of orthologs #401. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:278 C.variabilis:223

Q75D52              	100.00%		E1ZQY4              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for E1ZQY4 as seed ortholog is 100%.

Group of orthologs #402. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 C.variabilis:277

Q756S9              	100.00%		E1ZHJ5              	100.00%
Bootstrap support for Q756S9 as seed ortholog is 100%.
Bootstrap support for E1ZHJ5 as seed ortholog is 100%.

Group of orthologs #403. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 C.variabilis:277

Q756H2              	100.00%		E1ZKS0              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for E1ZKS0 as seed ortholog is 100%.

Group of orthologs #404. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 C.variabilis:277

Q75B16              	100.00%		E1ZIR7              	100.00%
Bootstrap support for Q75B16 as seed ortholog is 100%.
Bootstrap support for E1ZIR7 as seed ortholog is 100%.

Group of orthologs #405. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:173 C.variabilis:106

Q75D02              	100.00%		E1ZIR8              	100.00%
Bootstrap support for Q75D02 as seed ortholog is 100%.
Bootstrap support for E1ZIR8 as seed ortholog is 99%.

Group of orthologs #406. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 C.variabilis:277

Q75BA7              	100.00%		E1ZLK5              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for E1ZLK5 as seed ortholog is 100%.

Group of orthologs #407. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:277

Q755A7              	100.00%		E1ZRE8              	100.00%
Bootstrap support for Q755A7 as seed ortholog is 100%.
Bootstrap support for E1ZRE8 as seed ortholog is 100%.

Group of orthologs #408. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:277 C.variabilis:191

Q75F44              	100.00%		E1ZIS4              	100.00%
Bootstrap support for Q75F44 as seed ortholog is 100%.
Bootstrap support for E1ZIS4 as seed ortholog is 100%.

Group of orthologs #409. Best score 277 bits
Score difference with first non-orthologous sequence - A.gossypii:174 C.variabilis:277

Q75D79              	100.00%		E1ZN83              	100.00%
Bootstrap support for Q75D79 as seed ortholog is 99%.
Bootstrap support for E1ZN83 as seed ortholog is 100%.

Group of orthologs #410. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 C.variabilis:133

Q759G5              	100.00%		E1ZEQ9              	100.00%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for E1ZEQ9 as seed ortholog is 99%.

Group of orthologs #411. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:199 C.variabilis:116

Q757E3              	100.00%		E1ZL77              	100.00%
Bootstrap support for Q757E3 as seed ortholog is 100%.
Bootstrap support for E1ZL77 as seed ortholog is 99%.

Group of orthologs #412. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 C.variabilis:186

Q75A66              	100.00%		E1ZNT5              	100.00%
Bootstrap support for Q75A66 as seed ortholog is 100%.
Bootstrap support for E1ZNT5 as seed ortholog is 100%.

Group of orthologs #413. Best score 276 bits
Score difference with first non-orthologous sequence - A.gossypii:276 C.variabilis:126

Q75CW2              	100.00%		E1ZTC4              	100.00%
Bootstrap support for Q75CW2 as seed ortholog is 100%.
Bootstrap support for E1ZTC4 as seed ortholog is 99%.

Group of orthologs #414. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 C.variabilis:107

Q754S9              	100.00%		E1Z8Z9              	100.00%
Bootstrap support for Q754S9 as seed ortholog is 100%.
Bootstrap support for E1Z8Z9 as seed ortholog is 98%.

Group of orthologs #415. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:192

Q75BS2              	100.00%		E1ZJP3              	100.00%
Bootstrap support for Q75BS2 as seed ortholog is 99%.
Bootstrap support for E1ZJP3 as seed ortholog is 100%.

Group of orthologs #416. Best score 272 bits
Score difference with first non-orthologous sequence - A.gossypii:272 C.variabilis:272

Q75CY7              	100.00%		E1ZQV5              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for E1ZQV5 as seed ortholog is 100%.

Group of orthologs #417. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 C.variabilis:48

Q759L4              	100.00%		E1Z9N0              	100.00%
Bootstrap support for Q759L4 as seed ortholog is 100%.
Bootstrap support for E1Z9N0 as seed ortholog is 81%.

Group of orthologs #418. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:214 C.variabilis:193

Q756J9              	100.00%		E1ZM06              	100.00%
Bootstrap support for Q756J9 as seed ortholog is 100%.
Bootstrap support for E1ZM06 as seed ortholog is 99%.

Group of orthologs #419. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:270 C.variabilis:270

Q754D2              	100.00%		E1ZPQ4              	100.00%
Bootstrap support for Q754D2 as seed ortholog is 100%.
Bootstrap support for E1ZPQ4 as seed ortholog is 100%.

Group of orthologs #420. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:269 C.variabilis:269

Q75BY4              	100.00%		E1ZCR5              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for E1ZCR5 as seed ortholog is 100%.

Group of orthologs #421. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:130 C.variabilis:269

O60027              	100.00%		E1ZP71              	100.00%
Bootstrap support for O60027 as seed ortholog is 99%.
Bootstrap support for E1ZP71 as seed ortholog is 100%.

Group of orthologs #422. Best score 269 bits
Score difference with first non-orthologous sequence - A.gossypii:188 C.variabilis:173

Q75BV3              	100.00%		E1ZN36              	100.00%
Bootstrap support for Q75BV3 as seed ortholog is 99%.
Bootstrap support for E1ZN36 as seed ortholog is 99%.

Group of orthologs #423. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:221

Q75CQ3              	100.00%		E1ZFT1              	100.00%
Q75F01              	77.34%		E1ZFZ7              	18.41%
Q759M2              	29.13%		
Bootstrap support for Q75CQ3 as seed ortholog is 99%.
Bootstrap support for E1ZFT1 as seed ortholog is 100%.

Group of orthologs #424. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:268 C.variabilis:268

Q751D7              	100.00%		E1ZFN2              	100.00%
Bootstrap support for Q751D7 as seed ortholog is 100%.
Bootstrap support for E1ZFN2 as seed ortholog is 100%.

Group of orthologs #425. Best score 268 bits
Score difference with first non-orthologous sequence - A.gossypii:138 C.variabilis:268

Q75BC1              	100.00%		E1ZCR2              	100.00%
Bootstrap support for Q75BC1 as seed ortholog is 100%.
Bootstrap support for E1ZCR2 as seed ortholog is 100%.

Group of orthologs #426. Best score 267 bits
Score difference with first non-orthologous sequence - A.gossypii:116 C.variabilis:46

Q756T0              	100.00%		E1ZJU9              	100.00%
Bootstrap support for Q756T0 as seed ortholog is 100%.
Bootstrap support for E1ZJU9 as seed ortholog is 99%.

Group of orthologs #427. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 C.variabilis:266

Q756J7              	100.00%		E1Z4D7              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for E1Z4D7 as seed ortholog is 100%.

Group of orthologs #428. Best score 266 bits
Score difference with first non-orthologous sequence - A.gossypii:266 C.variabilis:266

Q756G9              	100.00%		E1ZTG5              	100.00%
Bootstrap support for Q756G9 as seed ortholog is 100%.
Bootstrap support for E1ZTG5 as seed ortholog is 100%.

Group of orthologs #429. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 C.variabilis:265

Q754W1              	100.00%		E1ZIC2              	100.00%
Bootstrap support for Q754W1 as seed ortholog is 100%.
Bootstrap support for E1ZIC2 as seed ortholog is 100%.

Group of orthologs #430. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 C.variabilis:128

Q752I6              	100.00%		E1ZEI2              	100.00%
Bootstrap support for Q752I6 as seed ortholog is 100%.
Bootstrap support for E1ZEI2 as seed ortholog is 99%.

Group of orthologs #431. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 C.variabilis:264

Q754R0              	100.00%		E1ZFM3              	100.00%
Bootstrap support for Q754R0 as seed ortholog is 100%.
Bootstrap support for E1ZFM3 as seed ortholog is 100%.

Group of orthologs #432. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 C.variabilis:215

Q75CE1              	100.00%		E1ZBH4              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for E1ZBH4 as seed ortholog is 100%.

Group of orthologs #433. Best score 264 bits
Score difference with first non-orthologous sequence - A.gossypii:264 C.variabilis:223

Q758H3              	100.00%		E1ZR65              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for E1ZR65 as seed ortholog is 100%.

Group of orthologs #434. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:263

Q758S8              	100.00%		E1Z6F9              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 100%.
Bootstrap support for E1Z6F9 as seed ortholog is 100%.

Group of orthologs #435. Best score 263 bits
Score difference with first non-orthologous sequence - A.gossypii:263 C.variabilis:263

Q75EL3              	100.00%		E1Z5N2              	100.00%
Bootstrap support for Q75EL3 as seed ortholog is 100%.
Bootstrap support for E1Z5N2 as seed ortholog is 100%.

Group of orthologs #436. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:145 C.variabilis:43

Q756T8              	100.00%		E1Z3A2              	100.00%
Bootstrap support for Q756T8 as seed ortholog is 99%.
Bootstrap support for E1Z3A2 as seed ortholog is 83%.

Group of orthologs #437. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 C.variabilis:84

Q75F49              	100.00%		E1ZIH5              	100.00%
Bootstrap support for Q75F49 as seed ortholog is 100%.
Bootstrap support for E1ZIH5 as seed ortholog is 99%.

Group of orthologs #438. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 C.variabilis:261

Q752U0              	100.00%		E1Z8Z4              	100.00%
Bootstrap support for Q752U0 as seed ortholog is 100%.
Bootstrap support for E1Z8Z4 as seed ortholog is 100%.

Group of orthologs #439. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 C.variabilis:261

Q74ZK3              	100.00%		E1ZDD4              	100.00%
Bootstrap support for Q74ZK3 as seed ortholog is 100%.
Bootstrap support for E1ZDD4 as seed ortholog is 100%.

Group of orthologs #440. Best score 261 bits
Score difference with first non-orthologous sequence - A.gossypii:261 C.variabilis:92

Q75BE8              	100.00%		E1ZAS5              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for E1ZAS5 as seed ortholog is 99%.

Group of orthologs #441. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 C.variabilis:144

Q759J2              	100.00%		E1Z2D0              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for E1Z2D0 as seed ortholog is 99%.

Group of orthologs #442. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 C.variabilis:260

Q758L6              	100.00%		E1Z9Q9              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 100%.
Bootstrap support for E1Z9Q9 as seed ortholog is 100%.

Group of orthologs #443. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:192 C.variabilis:260

Q750D2              	100.00%		E1ZRV7              	100.00%
Bootstrap support for Q750D2 as seed ortholog is 99%.
Bootstrap support for E1ZRV7 as seed ortholog is 100%.

Group of orthologs #444. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 C.variabilis:259

Q753A2              	100.00%		E1Z5E8              	100.00%
Bootstrap support for Q753A2 as seed ortholog is 100%.
Bootstrap support for E1Z5E8 as seed ortholog is 100%.

Group of orthologs #445. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:174 C.variabilis:258

Q759N3              	100.00%		E1ZIH1              	100.00%
Bootstrap support for Q759N3 as seed ortholog is 99%.
Bootstrap support for E1ZIH1 as seed ortholog is 100%.

Group of orthologs #446. Best score 258 bits
Score difference with first non-orthologous sequence - A.gossypii:160 C.variabilis:258

Q758T9              	100.00%		E1ZJJ7              	100.00%
Bootstrap support for Q758T9 as seed ortholog is 99%.
Bootstrap support for E1ZJJ7 as seed ortholog is 100%.

Group of orthologs #447. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:257 C.variabilis:33

Q752X6              	100.00%		E1ZAS0              	100.00%
                    	       		E1ZI09              	9.81%
Bootstrap support for Q752X6 as seed ortholog is 100%.
Bootstrap support for E1ZAS0 as seed ortholog is 50%.
Alternative seed ortholog is E1Z632 (33 bits away from this cluster)

Group of orthologs #448. Best score 257 bits
Score difference with first non-orthologous sequence - A.gossypii:257 C.variabilis:257

Q75CR3              	100.00%		E1ZDR7              	100.00%
Q753I4              	16.23%		
Bootstrap support for Q75CR3 as seed ortholog is 100%.
Bootstrap support for E1ZDR7 as seed ortholog is 100%.

Group of orthologs #449. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 C.variabilis:256

Q758U0              	100.00%		E1ZGZ9              	100.00%
Bootstrap support for Q758U0 as seed ortholog is 100%.
Bootstrap support for E1ZGZ9 as seed ortholog is 100%.

Group of orthologs #450. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:148 C.variabilis:42

Q755T4              	100.00%		E1ZTE2              	100.00%
Bootstrap support for Q755T4 as seed ortholog is 100%.
Bootstrap support for E1ZTE2 as seed ortholog is 96%.

Group of orthologs #451. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:178

D8FGB8              	100.00%		E1ZI30              	100.00%
Q751H3              	32.40%		
Q75BM0              	14.46%		
Bootstrap support for D8FGB8 as seed ortholog is 97%.
Bootstrap support for E1ZI30 as seed ortholog is 100%.

Group of orthologs #452. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 C.variabilis:186

Q75AJ9              	100.00%		E1ZLB6              	100.00%
                    	       		E1ZQQ3              	100.00%
                    	       		E1ZF89              	26.25%
Bootstrap support for Q75AJ9 as seed ortholog is 100%.
Bootstrap support for E1ZLB6 as seed ortholog is 100%.
Bootstrap support for E1ZQQ3 as seed ortholog is 100%.

Group of orthologs #453. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 C.variabilis:255

Q74ZC6              	100.00%		E1ZAF2              	100.00%
Bootstrap support for Q74ZC6 as seed ortholog is 100%.
Bootstrap support for E1ZAF2 as seed ortholog is 100%.

Group of orthologs #454. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 C.variabilis:255

Q75DX3              	100.00%		E1Z5L6              	100.00%
Bootstrap support for Q75DX3 as seed ortholog is 100%.
Bootstrap support for E1Z5L6 as seed ortholog is 100%.

Group of orthologs #455. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:117 C.variabilis:108

Q74ZL1              	100.00%		E1ZIQ2              	100.00%
Bootstrap support for Q74ZL1 as seed ortholog is 99%.
Bootstrap support for E1ZIQ2 as seed ortholog is 99%.

Group of orthologs #456. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:255

Q750N9              	100.00%		E1ZQQ9              	100.00%
Bootstrap support for Q750N9 as seed ortholog is 100%.
Bootstrap support for E1ZQQ9 as seed ortholog is 100%.

Group of orthologs #457. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:193

Q75AY6              	100.00%		E1ZI47              	100.00%
Bootstrap support for Q75AY6 as seed ortholog is 99%.
Bootstrap support for E1ZI47 as seed ortholog is 99%.

Group of orthologs #458. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 C.variabilis:255

Q75F61              	100.00%		E1ZHF6              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 100%.
Bootstrap support for E1ZHF6 as seed ortholog is 100%.

Group of orthologs #459. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 C.variabilis:255

Q75AB5              	100.00%		E1ZPT8              	100.00%
Bootstrap support for Q75AB5 as seed ortholog is 100%.
Bootstrap support for E1ZPT8 as seed ortholog is 100%.

Group of orthologs #460. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:37 C.variabilis:255

Q75BX7              	100.00%		E1ZR39              	100.00%
Bootstrap support for Q75BX7 as seed ortholog is 99%.
Bootstrap support for E1ZR39 as seed ortholog is 100%.

Group of orthologs #461. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:255 C.variabilis:255

Q75CI9              	100.00%		E1ZTK8              	100.00%
Bootstrap support for Q75CI9 as seed ortholog is 100%.
Bootstrap support for E1ZTK8 as seed ortholog is 100%.

Group of orthologs #462. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:254 C.variabilis:42

Q756A9              	100.00%		E1ZJ41              	100.00%
Bootstrap support for Q756A9 as seed ortholog is 100%.
Bootstrap support for E1ZJ41 as seed ortholog is 78%.

Group of orthologs #463. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 C.variabilis:253

Q74ZB1              	100.00%		E1Z934              	100.00%
Bootstrap support for Q74ZB1 as seed ortholog is 100%.
Bootstrap support for E1Z934 as seed ortholog is 100%.

Group of orthologs #464. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 C.variabilis:253

Q755C1              	100.00%		E1Z5P6              	100.00%
Bootstrap support for Q755C1 as seed ortholog is 100%.
Bootstrap support for E1Z5P6 as seed ortholog is 100%.

Group of orthologs #465. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 C.variabilis:253

Q75D16              	100.00%		E1Z2W2              	100.00%
Bootstrap support for Q75D16 as seed ortholog is 100%.
Bootstrap support for E1Z2W2 as seed ortholog is 100%.

Group of orthologs #466. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 C.variabilis:253

Q751A1              	100.00%		E1ZD04              	100.00%
Bootstrap support for Q751A1 as seed ortholog is 100%.
Bootstrap support for E1ZD04 as seed ortholog is 100%.

Group of orthologs #467. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 C.variabilis:253

Q75AY3              	100.00%		E1Z771              	100.00%
Bootstrap support for Q75AY3 as seed ortholog is 100%.
Bootstrap support for E1Z771 as seed ortholog is 100%.

Group of orthologs #468. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 C.variabilis:253

Q757R6              	100.00%		E1ZAJ1              	100.00%
Bootstrap support for Q757R6 as seed ortholog is 100%.
Bootstrap support for E1ZAJ1 as seed ortholog is 100%.

Group of orthologs #469. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 C.variabilis:252

Q750K5              	100.00%		E1Z6Q9              	100.00%
Bootstrap support for Q750K5 as seed ortholog is 100%.
Bootstrap support for E1Z6Q9 as seed ortholog is 100%.

Group of orthologs #470. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 C.variabilis:252

Q755S0              	100.00%		E1ZFK8              	100.00%
Bootstrap support for Q755S0 as seed ortholog is 100%.
Bootstrap support for E1ZFK8 as seed ortholog is 100%.

Group of orthologs #471. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:252 C.variabilis:166

Q75CZ3              	100.00%		E1ZD90              	100.00%
Bootstrap support for Q75CZ3 as seed ortholog is 100%.
Bootstrap support for E1ZD90 as seed ortholog is 100%.

Group of orthologs #472. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:109

Q757I6              	100.00%		E1ZLQ0              	100.00%
Bootstrap support for Q757I6 as seed ortholog is 97%.
Bootstrap support for E1ZLQ0 as seed ortholog is 99%.

Group of orthologs #473. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 C.variabilis:251

Q75F36              	100.00%		E1Z5S8              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for E1Z5S8 as seed ortholog is 100%.

Group of orthologs #474. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 C.variabilis:251

Q759W0              	100.00%		E1ZIS8              	100.00%
Bootstrap support for Q759W0 as seed ortholog is 100%.
Bootstrap support for E1ZIS8 as seed ortholog is 100%.

Group of orthologs #475. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 C.variabilis:250

Q75EG2              	100.00%		E1ZA79              	100.00%
Bootstrap support for Q75EG2 as seed ortholog is 100%.
Bootstrap support for E1ZA79 as seed ortholog is 100%.

Group of orthologs #476. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 C.variabilis:250

Q75BX0              	100.00%		E1ZIC7              	100.00%
Bootstrap support for Q75BX0 as seed ortholog is 100%.
Bootstrap support for E1ZIC7 as seed ortholog is 100%.

Group of orthologs #477. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:121 C.variabilis:250

Q757V5              	100.00%		E1ZMX2              	100.00%
Bootstrap support for Q757V5 as seed ortholog is 99%.
Bootstrap support for E1ZMX2 as seed ortholog is 100%.

Group of orthologs #478. Best score 250 bits
Score difference with first non-orthologous sequence - A.gossypii:250 C.variabilis:250

Q75CD7              	100.00%		E1ZLP7              	100.00%
Bootstrap support for Q75CD7 as seed ortholog is 100%.
Bootstrap support for E1ZLP7 as seed ortholog is 100%.

Group of orthologs #479. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 C.variabilis:249

Q753X4              	100.00%		E1ZT95              	100.00%
Bootstrap support for Q753X4 as seed ortholog is 100%.
Bootstrap support for E1ZT95 as seed ortholog is 100%.

Group of orthologs #480. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 C.variabilis:249

Q756X5              	100.00%		E1ZST4              	100.00%
Bootstrap support for Q756X5 as seed ortholog is 100%.
Bootstrap support for E1ZST4 as seed ortholog is 100%.

Group of orthologs #481. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:248

Q750Y8              	100.00%		E1ZKB3              	100.00%
                    	       		E1ZJ95              	16.28%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for E1ZKB3 as seed ortholog is 100%.

Group of orthologs #482. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:198

Q75CC4              	100.00%		E1Z3F7              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for E1Z3F7 as seed ortholog is 100%.

Group of orthologs #483. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:140

Q758V7              	100.00%		E1Z741              	100.00%
Bootstrap support for Q758V7 as seed ortholog is 100%.
Bootstrap support for E1Z741 as seed ortholog is 99%.

Group of orthologs #484. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:184

Q74ZK8              	100.00%		E1ZF82              	100.00%
Bootstrap support for Q74ZK8 as seed ortholog is 100%.
Bootstrap support for E1ZF82 as seed ortholog is 100%.

Group of orthologs #485. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:248

Q753C6              	100.00%		E1ZLF1              	100.00%
Bootstrap support for Q753C6 as seed ortholog is 100%.
Bootstrap support for E1ZLF1 as seed ortholog is 100%.

Group of orthologs #486. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:248

Q75CQ9              	100.00%		E1ZEX4              	100.00%
Bootstrap support for Q75CQ9 as seed ortholog is 100%.
Bootstrap support for E1ZEX4 as seed ortholog is 100%.

Group of orthologs #487. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:1 C.variabilis:57

Q759X8              	100.00%		E1ZQN8              	100.00%
Bootstrap support for Q759X8 as seed ortholog is 54%.
Alternative seed ortholog is Q8J1G7 (1 bits away from this cluster)
Bootstrap support for E1ZQN8 as seed ortholog is 90%.

Group of orthologs #488. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 C.variabilis:248

Q75E36              	100.00%		E1ZQR8              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for E1ZQR8 as seed ortholog is 100%.

Group of orthologs #489. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:247 C.variabilis:247

Q75EW1              	100.00%		E1ZPH0              	100.00%
Bootstrap support for Q75EW1 as seed ortholog is 100%.
Bootstrap support for E1ZPH0 as seed ortholog is 100%.

Group of orthologs #490. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:246 C.variabilis:13

Q74Z87              	100.00%		E1ZNI3              	100.00%
Bootstrap support for Q74Z87 as seed ortholog is 100%.
Bootstrap support for E1ZNI3 as seed ortholog is 56%.
Alternative seed ortholog is E1ZAS9 (13 bits away from this cluster)

Group of orthologs #491. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 C.variabilis:245

Q75EK1              	100.00%		E1Z794              	100.00%
Bootstrap support for Q75EK1 as seed ortholog is 100%.
Bootstrap support for E1Z794 as seed ortholog is 100%.

Group of orthologs #492. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:145 C.variabilis:113

Q75CA9              	100.00%		E1ZFM9              	100.00%
Bootstrap support for Q75CA9 as seed ortholog is 100%.
Bootstrap support for E1ZFM9 as seed ortholog is 99%.

Group of orthologs #493. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 C.variabilis:243

Q74ZF6              	100.00%		E1ZDX6              	100.00%
                    	       		E1ZAQ7              	45.40%
Bootstrap support for Q74ZF6 as seed ortholog is 100%.
Bootstrap support for E1ZDX6 as seed ortholog is 100%.

Group of orthologs #494. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 C.variabilis:156

Q759H9              	100.00%		E1Z9C4              	100.00%
Bootstrap support for Q759H9 as seed ortholog is 100%.
Bootstrap support for E1Z9C4 as seed ortholog is 100%.

Group of orthologs #495. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:75 C.variabilis:94

Q75C99              	100.00%		E1ZH62              	100.00%
Bootstrap support for Q75C99 as seed ortholog is 94%.
Bootstrap support for E1ZH62 as seed ortholog is 98%.

Group of orthologs #496. Best score 243 bits
Score difference with first non-orthologous sequence - A.gossypii:243 C.variabilis:243

Q75DV1              	100.00%		E1ZPB0              	100.00%
Bootstrap support for Q75DV1 as seed ortholog is 100%.
Bootstrap support for E1ZPB0 as seed ortholog is 100%.

Group of orthologs #497. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 C.variabilis:242

Q759I9              	100.00%		E1Z4I1              	100.00%
Q754M0              	100.00%		E1Z4I0              	100.00%
Bootstrap support for Q759I9 as seed ortholog is 100%.
Bootstrap support for Q754M0 as seed ortholog is 100%.
Bootstrap support for E1Z4I1 as seed ortholog is 100%.
Bootstrap support for E1Z4I0 as seed ortholog is 100%.

Group of orthologs #498. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 C.variabilis:87

Q759A9              	100.00%		E1Z7Q4              	100.00%
                    	       		E1Z630              	10.20%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for E1Z7Q4 as seed ortholog is 97%.

Group of orthologs #499. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 C.variabilis:242

Q75BR9              	100.00%		E1Z9W2              	100.00%
Bootstrap support for Q75BR9 as seed ortholog is 100%.
Bootstrap support for E1Z9W2 as seed ortholog is 100%.

Group of orthologs #500. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 C.variabilis:242

Q75B99              	100.00%		E1ZCX4              	100.00%
Bootstrap support for Q75B99 as seed ortholog is 100%.
Bootstrap support for E1ZCX4 as seed ortholog is 100%.

Group of orthologs #501. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:242 C.variabilis:242

Q75B75              	100.00%		E1ZH71              	100.00%
Bootstrap support for Q75B75 as seed ortholog is 100%.
Bootstrap support for E1ZH71 as seed ortholog is 100%.

Group of orthologs #502. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:50 C.variabilis:240

Q75BY1              	100.00%		E1Z570              	100.00%
Bootstrap support for Q75BY1 as seed ortholog is 95%.
Bootstrap support for E1Z570 as seed ortholog is 100%.

Group of orthologs #503. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:148

Q75AV4              	100.00%		E1Z6I6              	100.00%
Bootstrap support for Q75AV4 as seed ortholog is 100%.
Bootstrap support for E1Z6I6 as seed ortholog is 99%.

Group of orthologs #504. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 C.variabilis:240

Q75BC0              	100.00%		E1ZBB9              	100.00%
Bootstrap support for Q75BC0 as seed ortholog is 100%.
Bootstrap support for E1ZBB9 as seed ortholog is 100%.

Group of orthologs #505. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 C.variabilis:240

Q753V9              	100.00%		E1ZHR8              	100.00%
Bootstrap support for Q753V9 as seed ortholog is 100%.
Bootstrap support for E1ZHR8 as seed ortholog is 100%.

Group of orthologs #506. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:106

Q74ZE2              	100.00%		E1ZNZ1              	100.00%
Bootstrap support for Q74ZE2 as seed ortholog is 99%.
Bootstrap support for E1ZNZ1 as seed ortholog is 100%.

Group of orthologs #507. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:145

Q75BY6              	100.00%		E1ZPW4              	100.00%
Bootstrap support for Q75BY6 as seed ortholog is 98%.
Bootstrap support for E1ZPW4 as seed ortholog is 99%.

Group of orthologs #508. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:26 C.variabilis:30

Q75DI8              	100.00%		E1ZP70              	100.00%
Bootstrap support for Q75DI8 as seed ortholog is 79%.
Bootstrap support for E1ZP70 as seed ortholog is 81%.

Group of orthologs #509. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 C.variabilis:240

Q8J2M3              	100.00%		E1ZRI2              	100.00%
Bootstrap support for Q8J2M3 as seed ortholog is 100%.
Bootstrap support for E1ZRI2 as seed ortholog is 100%.

Group of orthologs #510. Best score 239 bits
Score difference with first non-orthologous sequence - A.gossypii:239 C.variabilis:239

Q75A30              	100.00%		E1ZB08              	100.00%
Bootstrap support for Q75A30 as seed ortholog is 100%.
Bootstrap support for E1ZB08 as seed ortholog is 100%.

Group of orthologs #511. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 C.variabilis:238

Q75CP8              	100.00%		E1Z343              	100.00%
Bootstrap support for Q75CP8 as seed ortholog is 100%.
Bootstrap support for E1Z343 as seed ortholog is 100%.

Group of orthologs #512. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:141 C.variabilis:238

Q74Z36              	100.00%		E1ZDU2              	100.00%
Bootstrap support for Q74Z36 as seed ortholog is 99%.
Bootstrap support for E1ZDU2 as seed ortholog is 100%.

Group of orthologs #513. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 C.variabilis:238

Q75DB6              	100.00%		E1Z841              	100.00%
Bootstrap support for Q75DB6 as seed ortholog is 100%.
Bootstrap support for E1Z841 as seed ortholog is 100%.

Group of orthologs #514. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 C.variabilis:238

Q752C8              	100.00%		E1ZTH9              	100.00%
Bootstrap support for Q752C8 as seed ortholog is 100%.
Bootstrap support for E1ZTH9 as seed ortholog is 100%.

Group of orthologs #515. Best score 238 bits
Score difference with first non-orthologous sequence - A.gossypii:238 C.variabilis:238

Q75F69              	100.00%		E1ZM16              	100.00%
Bootstrap support for Q75F69 as seed ortholog is 100%.
Bootstrap support for E1ZM16 as seed ortholog is 100%.

Group of orthologs #516. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:30

Q757N1              	100.00%		E1ZFV1              	100.00%
                    	       		E1ZR66              	100.00%
                    	       		E1ZRC8              	18.52%
Bootstrap support for Q757N1 as seed ortholog is 100%.
Bootstrap support for E1ZFV1 as seed ortholog is 98%.
Bootstrap support for E1ZR66 as seed ortholog is 98%.

Group of orthologs #517. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 C.variabilis:176

Q75D62              	100.00%		E1ZLK2              	100.00%
Bootstrap support for Q75D62 as seed ortholog is 100%.
Bootstrap support for E1ZLK2 as seed ortholog is 100%.

Group of orthologs #518. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:236 C.variabilis:236

Q759R1              	100.00%		E1ZJ73              	100.00%
Bootstrap support for Q759R1 as seed ortholog is 100%.
Bootstrap support for E1ZJ73 as seed ortholog is 100%.

Group of orthologs #519. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 C.variabilis:235

Q75B81              	100.00%		E1ZMJ8              	100.00%
                    	       		E1ZQ94              	40.07%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for E1ZMJ8 as seed ortholog is 100%.

Group of orthologs #520. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 C.variabilis:235

Q750Q9              	100.00%		E1Z3T3              	100.00%
Bootstrap support for Q750Q9 as seed ortholog is 100%.
Bootstrap support for E1Z3T3 as seed ortholog is 100%.

Group of orthologs #521. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 C.variabilis:235

Q753B2              	100.00%		E1Z4U0              	100.00%
Bootstrap support for Q753B2 as seed ortholog is 100%.
Bootstrap support for E1Z4U0 as seed ortholog is 100%.

Group of orthologs #522. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:119

Q75AG1              	100.00%		E1Z681              	100.00%
Bootstrap support for Q75AG1 as seed ortholog is 99%.
Bootstrap support for E1Z681 as seed ortholog is 99%.

Group of orthologs #523. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:235 C.variabilis:235

Q75DV3              	100.00%		E1ZBI4              	100.00%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for E1ZBI4 as seed ortholog is 100%.

Group of orthologs #524. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 C.variabilis:193

Q751A4              	100.00%		E1ZFP6              	100.00%
Q74Z35              	43.62%		
Q759G2              	15.56%		
Bootstrap support for Q751A4 as seed ortholog is 100%.
Bootstrap support for E1ZFP6 as seed ortholog is 100%.

Group of orthologs #525. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:88

Q75ET2              	100.00%		E1ZD23              	100.00%
                    	       		E1Z1V6              	11.60%
Bootstrap support for Q75ET2 as seed ortholog is 76%.
Bootstrap support for E1ZD23 as seed ortholog is 93%.

Group of orthologs #526. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:137 C.variabilis:132

Q755D7              	100.00%		E1Z5X9              	100.00%
Bootstrap support for Q755D7 as seed ortholog is 100%.
Bootstrap support for E1Z5X9 as seed ortholog is 100%.

Group of orthologs #527. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 C.variabilis:234

Q74Z31              	100.00%		E1ZPH6              	100.00%
Bootstrap support for Q74Z31 as seed ortholog is 100%.
Bootstrap support for E1ZPH6 as seed ortholog is 100%.

Group of orthologs #528. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 C.variabilis:234

Q75F45              	100.00%		E1ZDJ7              	100.00%
Bootstrap support for Q75F45 as seed ortholog is 100%.
Bootstrap support for E1ZDJ7 as seed ortholog is 100%.

Group of orthologs #529. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 C.variabilis:148

Q75F07              	100.00%		E1ZBK3              	100.00%
Bootstrap support for Q75F07 as seed ortholog is 100%.
Bootstrap support for E1ZBK3 as seed ortholog is 99%.

Group of orthologs #530. Best score 233 bits
Score difference with first non-orthologous sequence - A.gossypii:233 C.variabilis:113

Q75D84              	100.00%		E1ZQQ8              	100.00%
Bootstrap support for Q75D84 as seed ortholog is 100%.
Bootstrap support for E1ZQQ8 as seed ortholog is 99%.

Group of orthologs #531. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 C.variabilis:232

Q75D31              	100.00%		E1ZD92              	100.00%
Bootstrap support for Q75D31 as seed ortholog is 100%.
Bootstrap support for E1ZD92 as seed ortholog is 100%.

Group of orthologs #532. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 C.variabilis:52

Q75DG3              	100.00%		E1ZQX9              	100.00%
Bootstrap support for Q75DG3 as seed ortholog is 100%.
Bootstrap support for E1ZQX9 as seed ortholog is 86%.

Group of orthologs #533. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 C.variabilis:231

Q757W4              	100.00%		E1Z476              	100.00%
Bootstrap support for Q757W4 as seed ortholog is 100%.
Bootstrap support for E1Z476 as seed ortholog is 100%.

Group of orthologs #534. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 C.variabilis:231

Q754Z6              	100.00%		E1ZQN9              	100.00%
Bootstrap support for Q754Z6 as seed ortholog is 100%.
Bootstrap support for E1ZQN9 as seed ortholog is 100%.

Group of orthologs #535. Best score 231 bits
Score difference with first non-orthologous sequence - A.gossypii:231 C.variabilis:231

Q753N8              	100.00%		E1ZSN8              	100.00%
Bootstrap support for Q753N8 as seed ortholog is 100%.
Bootstrap support for E1ZSN8 as seed ortholog is 100%.

Group of orthologs #536. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 C.variabilis:156

Q757J8              	100.00%		E1ZB67              	100.00%
Bootstrap support for Q757J8 as seed ortholog is 100%.
Bootstrap support for E1ZB67 as seed ortholog is 100%.

Group of orthologs #537. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 C.variabilis:229

Q75A91              	100.00%		E1Z2J7              	100.00%
Bootstrap support for Q75A91 as seed ortholog is 100%.
Bootstrap support for E1Z2J7 as seed ortholog is 100%.

Group of orthologs #538. Best score 229 bits
Score difference with first non-orthologous sequence - A.gossypii:229 C.variabilis:229

Q755S1              	100.00%		E1ZQ36              	100.00%
Bootstrap support for Q755S1 as seed ortholog is 100%.
Bootstrap support for E1ZQ36 as seed ortholog is 100%.

Group of orthologs #539. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 C.variabilis:228

Q758H5              	100.00%		E1ZGA5              	100.00%
Bootstrap support for Q758H5 as seed ortholog is 100%.
Bootstrap support for E1ZGA5 as seed ortholog is 100%.

Group of orthologs #540. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 C.variabilis:228

Q75CK1              	100.00%		E1ZEZ4              	100.00%
Bootstrap support for Q75CK1 as seed ortholog is 100%.
Bootstrap support for E1ZEZ4 as seed ortholog is 100%.

Group of orthologs #541. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 C.variabilis:228

Q756S5              	100.00%		E1ZSB0              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for E1ZSB0 as seed ortholog is 100%.

Group of orthologs #542. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:227

Q750X9              	100.00%		E1Z3J0              	100.00%
Bootstrap support for Q750X9 as seed ortholog is 99%.
Bootstrap support for E1Z3J0 as seed ortholog is 100%.

Group of orthologs #543. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 C.variabilis:227

Q750M3              	100.00%		E1ZBS2              	100.00%
Bootstrap support for Q750M3 as seed ortholog is 100%.
Bootstrap support for E1ZBS2 as seed ortholog is 100%.

Group of orthologs #544. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 C.variabilis:227

Q750D0              	100.00%		E1ZCJ5              	100.00%
Bootstrap support for Q750D0 as seed ortholog is 100%.
Bootstrap support for E1ZCJ5 as seed ortholog is 100%.

Group of orthologs #545. Best score 227 bits
Score difference with first non-orthologous sequence - A.gossypii:227 C.variabilis:227

Q75DQ2              	100.00%		E1ZB51              	100.00%
Bootstrap support for Q75DQ2 as seed ortholog is 100%.
Bootstrap support for E1ZB51 as seed ortholog is 100%.

Group of orthologs #546. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:226 C.variabilis:226

Q75C82              	100.00%		E1ZM44              	100.00%
Bootstrap support for Q75C82 as seed ortholog is 100%.
Bootstrap support for E1ZM44 as seed ortholog is 100%.

Group of orthologs #547. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:33 C.variabilis:39

Q75BH1              	100.00%		E1Z5N6              	100.00%
Bootstrap support for Q75BH1 as seed ortholog is 84%.
Bootstrap support for E1Z5N6 as seed ortholog is 88%.

Group of orthologs #548. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:170 C.variabilis:225

Q750E8              	100.00%		E1ZTZ1              	100.00%
Bootstrap support for Q750E8 as seed ortholog is 99%.
Bootstrap support for E1ZTZ1 as seed ortholog is 100%.

Group of orthologs #549. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 C.variabilis:225

Q75AB0              	100.00%		E1ZNJ6              	100.00%
Bootstrap support for Q75AB0 as seed ortholog is 100%.
Bootstrap support for E1ZNJ6 as seed ortholog is 100%.

Group of orthologs #550. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:141 C.variabilis:128

Q75BF4              	100.00%		E1ZMI7              	100.00%
Bootstrap support for Q75BF4 as seed ortholog is 99%.
Bootstrap support for E1ZMI7 as seed ortholog is 99%.

Group of orthologs #551. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 C.variabilis:224

Q75B54              	100.00%		E1Z939              	100.00%
Bootstrap support for Q75B54 as seed ortholog is 100%.
Bootstrap support for E1Z939 as seed ortholog is 100%.

Group of orthologs #552. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 C.variabilis:224

Q757G6              	100.00%		E1ZJG2              	100.00%
Bootstrap support for Q757G6 as seed ortholog is 100%.
Bootstrap support for E1ZJG2 as seed ortholog is 100%.

Group of orthologs #553. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 C.variabilis:223

Q750I1              	100.00%		E1Z5J4              	100.00%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for E1Z5J4 as seed ortholog is 100%.

Group of orthologs #554. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 C.variabilis:223

Q75DA4              	100.00%		E1ZGL5              	100.00%
Bootstrap support for Q75DA4 as seed ortholog is 100%.
Bootstrap support for E1ZGL5 as seed ortholog is 100%.

Group of orthologs #555. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:223

Q751N9              	100.00%		E1ZRX8              	100.00%
Bootstrap support for Q751N9 as seed ortholog is 99%.
Bootstrap support for E1ZRX8 as seed ortholog is 100%.

Group of orthologs #556. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 C.variabilis:223

Q75F60              	100.00%		E1ZH34              	100.00%
Bootstrap support for Q75F60 as seed ortholog is 100%.
Bootstrap support for E1ZH34 as seed ortholog is 100%.

Group of orthologs #557. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:49 C.variabilis:12

Q750W6              	100.00%		E1Z6E6              	100.00%
Q756U6              	100.00%		E1ZIT6              	100.00%
                    	       		E1ZGK9              	59.56%
                    	       		E1ZMB1              	13.24%
Bootstrap support for Q750W6 as seed ortholog is 98%.
Bootstrap support for Q756U6 as seed ortholog is 94%.
Bootstrap support for E1Z6E6 as seed ortholog is 69%.
Alternative seed ortholog is E1Z9G7 (12 bits away from this cluster)
Bootstrap support for E1ZIT6 as seed ortholog is 57%.
Alternative seed ortholog is E1Z9G7 (12 bits away from this cluster)

Group of orthologs #558. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 C.variabilis:222

Q75AP1              	100.00%		E1Z4G8              	100.00%
Bootstrap support for Q75AP1 as seed ortholog is 100%.
Bootstrap support for E1Z4G8 as seed ortholog is 100%.

Group of orthologs #559. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:146

Q756U4              	100.00%		E1Z8F3              	100.00%
Bootstrap support for Q756U4 as seed ortholog is 98%.
Bootstrap support for E1Z8F3 as seed ortholog is 99%.

Group of orthologs #560. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 C.variabilis:222

Q75D05              	100.00%		E1Z828              	100.00%
Bootstrap support for Q75D05 as seed ortholog is 100%.
Bootstrap support for E1Z828 as seed ortholog is 100%.

Group of orthologs #561. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 C.variabilis:222

Q75EH1              	100.00%		E1ZCL3              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for E1ZCL3 as seed ortholog is 100%.

Group of orthologs #562. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:129

Q757Q7              	100.00%		E1ZAM9              	100.00%
Bootstrap support for Q757Q7 as seed ortholog is 100%.
Bootstrap support for E1ZAM9 as seed ortholog is 100%.

Group of orthologs #563. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 C.variabilis:221

Q758D0              	100.00%		E1ZC21              	100.00%
Bootstrap support for Q758D0 as seed ortholog is 100%.
Bootstrap support for E1ZC21 as seed ortholog is 100%.

Group of orthologs #564. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 C.variabilis:23

Q756F9              	100.00%		E1ZG17              	100.00%
Bootstrap support for Q756F9 as seed ortholog is 100%.
Bootstrap support for E1ZG17 as seed ortholog is 82%.

Group of orthologs #565. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 C.variabilis:220

Q750F7              	100.00%		E1ZER2              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for E1ZER2 as seed ortholog is 100%.

Group of orthologs #566. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 C.variabilis:155

Q757U6              	100.00%		E1ZAZ5              	100.00%
Bootstrap support for Q757U6 as seed ortholog is 100%.
Bootstrap support for E1ZAZ5 as seed ortholog is 99%.

Group of orthologs #567. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:64 C.variabilis:47

Q753G9              	100.00%		E1ZHY2              	100.00%
Bootstrap support for Q753G9 as seed ortholog is 93%.
Bootstrap support for E1ZHY2 as seed ortholog is 99%.

Group of orthologs #568. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:21 C.variabilis:84

Q75CE2              	100.00%		E1ZGQ0              	100.00%
Bootstrap support for Q75CE2 as seed ortholog is 63%.
Alternative seed ortholog is Q757C2 (21 bits away from this cluster)
Bootstrap support for E1ZGQ0 as seed ortholog is 95%.

Group of orthologs #569. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 C.variabilis:220

Q755C7              	100.00%		E1ZPQ8              	100.00%
Bootstrap support for Q755C7 as seed ortholog is 100%.
Bootstrap support for E1ZPQ8 as seed ortholog is 100%.

Group of orthologs #570. Best score 219 bits
Score difference with first non-orthologous sequence - A.gossypii:219 C.variabilis:219

Q75AQ1              	100.00%		E1ZQC4              	100.00%
Bootstrap support for Q75AQ1 as seed ortholog is 100%.
Bootstrap support for E1ZQC4 as seed ortholog is 100%.

Group of orthologs #571. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:85 C.variabilis:218

Q74ZY1              	100.00%		E1Z6Z2              	100.00%
                    	       		E1ZEJ0              	89.85%
                    	       		E1Z6Z0              	86.68%
                    	       		E1ZFV5              	45.63%
Bootstrap support for Q74ZY1 as seed ortholog is 94%.
Bootstrap support for E1Z6Z2 as seed ortholog is 100%.

Group of orthologs #572. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:218

Q754J0              	100.00%		E1Z6D8              	100.00%
Bootstrap support for Q754J0 as seed ortholog is 100%.
Bootstrap support for E1Z6D8 as seed ortholog is 100%.

Group of orthologs #573. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:218

Q757N7              	100.00%		E1Z501              	100.00%
Bootstrap support for Q757N7 as seed ortholog is 100%.
Bootstrap support for E1Z501 as seed ortholog is 100%.

Group of orthologs #574. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:66

Q756F8              	100.00%		E1Z6T2              	100.00%
Bootstrap support for Q756F8 as seed ortholog is 100%.
Bootstrap support for E1Z6T2 as seed ortholog is 92%.

Group of orthologs #575. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:218

Q751A3              	100.00%		E1ZC71              	100.00%
Bootstrap support for Q751A3 as seed ortholog is 100%.
Bootstrap support for E1ZC71 as seed ortholog is 100%.

Group of orthologs #576. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:154 C.variabilis:146

Q75C26              	100.00%		E1Z4N9              	100.00%
Bootstrap support for Q75C26 as seed ortholog is 99%.
Bootstrap support for E1Z4N9 as seed ortholog is 99%.

Group of orthologs #577. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:218

Q752B3              	100.00%		E1ZLI8              	100.00%
Bootstrap support for Q752B3 as seed ortholog is 100%.
Bootstrap support for E1ZLI8 as seed ortholog is 100%.

Group of orthologs #578. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:154

Q758E0              	100.00%		E1ZI50              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for E1ZI50 as seed ortholog is 100%.

Group of orthologs #579. Best score 218 bits
Score difference with first non-orthologous sequence - A.gossypii:218 C.variabilis:218

Q75EF1              	100.00%		E1ZNH9              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for E1ZNH9 as seed ortholog is 100%.

Group of orthologs #580. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 C.variabilis:217

Q75D59              	100.00%		E1Z830              	100.00%
Bootstrap support for Q75D59 as seed ortholog is 100%.
Bootstrap support for E1Z830 as seed ortholog is 100%.

Group of orthologs #581. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:82

Q74ZS7              	100.00%		E1ZIV4              	100.00%
Bootstrap support for Q74ZS7 as seed ortholog is 99%.
Bootstrap support for E1ZIV4 as seed ortholog is 99%.

Group of orthologs #582. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 C.variabilis:217

Q756I1              	100.00%		E1ZGQ4              	100.00%
Bootstrap support for Q756I1 as seed ortholog is 100%.
Bootstrap support for E1ZGQ4 as seed ortholog is 100%.

Group of orthologs #583. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:217 C.variabilis:60

Q757K8              	100.00%		E1ZJL6              	100.00%
Bootstrap support for Q757K8 as seed ortholog is 100%.
Bootstrap support for E1ZJL6 as seed ortholog is 90%.

Group of orthologs #584. Best score 217 bits
Score difference with first non-orthologous sequence - A.gossypii:177 C.variabilis:149

Q757P1              	100.00%		E1ZLT3              	100.00%
Bootstrap support for Q757P1 as seed ortholog is 99%.
Bootstrap support for E1ZLT3 as seed ortholog is 99%.

Group of orthologs #585. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 C.variabilis:216

Q756J5              	100.00%		E1Z960              	100.00%
Bootstrap support for Q756J5 as seed ortholog is 100%.
Bootstrap support for E1Z960 as seed ortholog is 100%.

Group of orthologs #586. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 C.variabilis:216

Q74Z88              	100.00%		E1ZJD8              	100.00%
Bootstrap support for Q74Z88 as seed ortholog is 100%.
Bootstrap support for E1ZJD8 as seed ortholog is 100%.

Group of orthologs #587. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:216

Q75C48              	100.00%		E1ZIB8              	100.00%
Bootstrap support for Q75C48 as seed ortholog is 99%.
Bootstrap support for E1ZIB8 as seed ortholog is 100%.

Group of orthologs #588. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 C.variabilis:215

Q750Z7              	100.00%		E1ZGX4              	100.00%
                    	       		E1ZM97              	27.63%
Bootstrap support for Q750Z7 as seed ortholog is 100%.
Bootstrap support for E1ZGX4 as seed ortholog is 100%.

Group of orthologs #589. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:37

Q750L3              	100.00%		E1Z5D6              	100.00%
Bootstrap support for Q750L3 as seed ortholog is 99%.
Bootstrap support for E1Z5D6 as seed ortholog is 92%.

Group of orthologs #590. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:140 C.variabilis:137

Q755R8              	100.00%		E1ZNZ2              	100.00%
Bootstrap support for Q755R8 as seed ortholog is 99%.
Bootstrap support for E1ZNZ2 as seed ortholog is 99%.

Group of orthologs #591. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 C.variabilis:215

Q759C8              	100.00%		E1ZN73              	100.00%
Bootstrap support for Q759C8 as seed ortholog is 100%.
Bootstrap support for E1ZN73 as seed ortholog is 100%.

Group of orthologs #592. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:41 C.variabilis:25

Q74ZI1              	100.00%		E1Z7A8              	100.00%
Bootstrap support for Q74ZI1 as seed ortholog is 94%.
Bootstrap support for E1Z7A8 as seed ortholog is 84%.

Group of orthologs #593. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 C.variabilis:214

Q75AS7              	100.00%		E1ZRG3              	100.00%
Bootstrap support for Q75AS7 as seed ortholog is 100%.
Bootstrap support for E1ZRG3 as seed ortholog is 100%.

Group of orthologs #594. Best score 214 bits
Score difference with first non-orthologous sequence - A.gossypii:214 C.variabilis:214

Q75A24              	100.00%		E1ZSX4              	100.00%
Bootstrap support for Q75A24 as seed ortholog is 100%.
Bootstrap support for E1ZSX4 as seed ortholog is 100%.

Group of orthologs #595. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:13

Q751V1              	100.00%		E1ZPY0              	100.00%
Bootstrap support for Q751V1 as seed ortholog is 96%.
Bootstrap support for E1ZPY0 as seed ortholog is 64%.
Alternative seed ortholog is E1ZTI4 (13 bits away from this cluster)

Group of orthologs #596. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:212 C.variabilis:212

Q75E54              	100.00%		E1ZMW8              	100.00%
Bootstrap support for Q75E54 as seed ortholog is 100%.
Bootstrap support for E1ZMW8 as seed ortholog is 100%.

Group of orthologs #597. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 C.variabilis:90

Q756M0              	100.00%		E1ZKU4              	100.00%
Q757W1              	15.23%		E1ZN24              	37.65%
Q75EZ1              	9.20%		E1ZN30              	25.90%
                    	       		E1Z864              	25.79%
                    	       		E1Z4E2              	17.63%
                    	       		E1Z2Q6              	14.69%
                    	       		E1ZD34              	6.42%
Bootstrap support for Q756M0 as seed ortholog is 100%.
Bootstrap support for E1ZKU4 as seed ortholog is 97%.

Group of orthologs #598. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:23 C.variabilis:65

Q757Q4              	100.00%		E1ZKB2              	100.00%
                    	       		E1ZKC0              	44.01%
                    	       		E1Z3S7              	35.83%
                    	       		E1ZF73              	29.90%
                    	       		E1Z2J3              	7.39%
Bootstrap support for Q757Q4 as seed ortholog is 68%.
Alternative seed ortholog is Q755L8 (23 bits away from this cluster)
Bootstrap support for E1ZKB2 as seed ortholog is 99%.

Group of orthologs #599. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:114

Q75BN2              	100.00%		E1ZQM1              	100.00%
                    	       		E1ZRL9              	8.67%
Bootstrap support for Q75BN2 as seed ortholog is 98%.
Bootstrap support for E1ZQM1 as seed ortholog is 99%.

Group of orthologs #600. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:37 C.variabilis:20

Q752H0              	100.00%		E1Z4P1              	100.00%
Bootstrap support for Q752H0 as seed ortholog is 74%.
Alternative seed ortholog is Q75D87 (37 bits away from this cluster)
Bootstrap support for E1Z4P1 as seed ortholog is 70%.
Alternative seed ortholog is E1ZBP1 (20 bits away from this cluster)

Group of orthologs #601. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:211 C.variabilis:57

Q755M2              	100.00%		E1Z302              	100.00%
Bootstrap support for Q755M2 as seed ortholog is 100%.
Bootstrap support for E1Z302 as seed ortholog is 96%.

Group of orthologs #602. Best score 211 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:211

Q758X7              	100.00%		E1Z9U8              	100.00%
Bootstrap support for Q758X7 as seed ortholog is 99%.
Bootstrap support for E1Z9U8 as seed ortholog is 100%.

Group of orthologs #603. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 C.variabilis:210

Q752N9              	100.00%		E1Z4P7              	100.00%
Bootstrap support for Q752N9 as seed ortholog is 100%.
Bootstrap support for E1Z4P7 as seed ortholog is 100%.

Group of orthologs #604. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:103 C.variabilis:50

Q75EB8              	100.00%		E1Z7E6              	100.00%
Bootstrap support for Q75EB8 as seed ortholog is 99%.
Bootstrap support for E1Z7E6 as seed ortholog is 98%.

Group of orthologs #605. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:29 C.variabilis:210

Q75DY9              	100.00%		E1Z8B5              	100.00%
Bootstrap support for Q75DY9 as seed ortholog is 73%.
Alternative seed ortholog is Q755A6 (29 bits away from this cluster)
Bootstrap support for E1Z8B5 as seed ortholog is 100%.

Group of orthologs #606. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:40 C.variabilis:77

Q752R6              	100.00%		E1ZQY5              	100.00%
Bootstrap support for Q752R6 as seed ortholog is 98%.
Bootstrap support for E1ZQY5 as seed ortholog is 90%.

Group of orthologs #607. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 C.variabilis:209

Q751P2              	100.00%		E1ZEB4              	100.00%
Q75CX2              	52.43%		
Q75EM6              	28.83%		
Bootstrap support for Q751P2 as seed ortholog is 100%.
Bootstrap support for E1ZEB4 as seed ortholog is 100%.

Group of orthologs #608. Best score 209 bits
Score difference with first non-orthologous sequence - A.gossypii:209 C.variabilis:157

Q751J4              	100.00%		E1Z5M5              	100.00%
Bootstrap support for Q751J4 as seed ortholog is 100%.
Bootstrap support for E1Z5M5 as seed ortholog is 100%.

Group of orthologs #609. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 C.variabilis:208

Q75EP7              	100.00%		E1Z426              	100.00%
Q75ER3              	14.20%		
Bootstrap support for Q75EP7 as seed ortholog is 100%.
Bootstrap support for E1Z426 as seed ortholog is 100%.

Group of orthologs #610. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 C.variabilis:208

D8FGG2              	100.00%		E1ZAK1              	100.00%
Bootstrap support for D8FGG2 as seed ortholog is 100%.
Bootstrap support for E1ZAK1 as seed ortholog is 100%.

Group of orthologs #611. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 C.variabilis:208

Q75E55              	100.00%		E1Z9Y6              	100.00%
Bootstrap support for Q75E55 as seed ortholog is 100%.
Bootstrap support for E1Z9Y6 as seed ortholog is 100%.

Group of orthologs #612. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 C.variabilis:208

Q759Y5              	100.00%		E1ZIW5              	100.00%
Bootstrap support for Q759Y5 as seed ortholog is 100%.
Bootstrap support for E1ZIW5 as seed ortholog is 100%.

Group of orthologs #613. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 C.variabilis:94

Q75B56              	100.00%		E1ZL88              	100.00%
Bootstrap support for Q75B56 as seed ortholog is 100%.
Bootstrap support for E1ZL88 as seed ortholog is 99%.

Group of orthologs #614. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:208 C.variabilis:208

Q75ER1              	100.00%		E1ZPN5              	100.00%
Bootstrap support for Q75ER1 as seed ortholog is 100%.
Bootstrap support for E1ZPN5 as seed ortholog is 100%.

Group of orthologs #615. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 C.variabilis:124

Q756K6              	100.00%		E1ZDX5              	100.00%
Bootstrap support for Q756K6 as seed ortholog is 100%.
Bootstrap support for E1ZDX5 as seed ortholog is 99%.

Group of orthologs #616. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 C.variabilis:207

Q75AG7              	100.00%		E1ZDU4              	100.00%
Bootstrap support for Q75AG7 as seed ortholog is 100%.
Bootstrap support for E1ZDU4 as seed ortholog is 100%.

Group of orthologs #617. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 C.variabilis:72

Q754F1              	100.00%		E1ZQ72              	100.00%
Bootstrap support for Q754F1 as seed ortholog is 100%.
Bootstrap support for E1ZQ72 as seed ortholog is 94%.

Group of orthologs #618. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:207 C.variabilis:207

Q75DH0              	100.00%		E1ZL18              	100.00%
Bootstrap support for Q75DH0 as seed ortholog is 100%.
Bootstrap support for E1ZL18 as seed ortholog is 100%.

Group of orthologs #619. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 C.variabilis:206

Q756A0              	100.00%		E1Z9W5              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for E1Z9W5 as seed ortholog is 100%.

Group of orthologs #620. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 C.variabilis:206

Q75BA5              	100.00%		E1Z7P9              	100.00%
Bootstrap support for Q75BA5 as seed ortholog is 100%.
Bootstrap support for E1Z7P9 as seed ortholog is 100%.

Group of orthologs #621. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:205

Q750E3              	100.00%		E1Z7Q3              	100.00%
                    	       		E1ZQX7              	100.00%
                    	       		E1ZEF2              	50.89%
                    	       		E1ZRF7              	35.03%
                    	       		E1ZD58              	33.48%
Bootstrap support for Q750E3 as seed ortholog is 87%.
Bootstrap support for E1Z7Q3 as seed ortholog is 100%.
Bootstrap support for E1ZQX7 as seed ortholog is 100%.

Group of orthologs #622. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 C.variabilis:205

Q75EF3              	100.00%		E1ZPQ9              	100.00%
                    	       		F2YGN3              	10.14%
Bootstrap support for Q75EF3 as seed ortholog is 100%.
Bootstrap support for E1ZPQ9 as seed ortholog is 100%.

Group of orthologs #623. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:138 C.variabilis:12

Q757F7              	100.00%		E1Z204              	100.00%
Bootstrap support for Q757F7 as seed ortholog is 100%.
Bootstrap support for E1Z204 as seed ortholog is 69%.
Alternative seed ortholog is E1ZC89 (12 bits away from this cluster)

Group of orthologs #624. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 C.variabilis:205

Q75AA7              	100.00%		E1Z3F1              	100.00%
Bootstrap support for Q75AA7 as seed ortholog is 100%.
Bootstrap support for E1Z3F1 as seed ortholog is 100%.

Group of orthologs #625. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 C.variabilis:205

Q75D37              	100.00%		E1ZCJ6              	100.00%
Bootstrap support for Q75D37 as seed ortholog is 100%.
Bootstrap support for E1ZCJ6 as seed ortholog is 100%.

Group of orthologs #626. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:205 C.variabilis:133

Q756D0              	100.00%		E1ZSS2              	100.00%
Bootstrap support for Q756D0 as seed ortholog is 100%.
Bootstrap support for E1ZSS2 as seed ortholog is 99%.

Group of orthologs #627. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q75DL7              	100.00%		E1ZS29              	100.00%
                    	       		E1ZS28              	47.74%
                    	       		E1ZTU5              	25.14%
Bootstrap support for Q75DL7 as seed ortholog is 100%.
Bootstrap support for E1ZS29 as seed ortholog is 100%.

Group of orthologs #628. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q75ES9              	100.00%		E1Z3E1              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for E1Z3E1 as seed ortholog is 100%.

Group of orthologs #629. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:137 C.variabilis:204

Q751P4              	100.00%		E1ZF72              	100.00%
Bootstrap support for Q751P4 as seed ortholog is 99%.
Bootstrap support for E1ZF72 as seed ortholog is 100%.

Group of orthologs #630. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q74ZN0              	100.00%		E1ZGX3              	100.00%
Bootstrap support for Q74ZN0 as seed ortholog is 100%.
Bootstrap support for E1ZGX3 as seed ortholog is 100%.

Group of orthologs #631. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q74ZC7              	100.00%		E1ZHU3              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for E1ZHU3 as seed ortholog is 100%.

Group of orthologs #632. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q753M6              	100.00%		E1ZJ45              	100.00%
Bootstrap support for Q753M6 as seed ortholog is 100%.
Bootstrap support for E1ZJ45 as seed ortholog is 100%.

Group of orthologs #633. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q757S9              	100.00%		E1ZQ20              	100.00%
Bootstrap support for Q757S9 as seed ortholog is 100%.
Bootstrap support for E1ZQ20 as seed ortholog is 100%.

Group of orthologs #634. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 C.variabilis:204

Q75A87              	100.00%		E1ZQP2              	100.00%
Bootstrap support for Q75A87 as seed ortholog is 100%.
Bootstrap support for E1ZQP2 as seed ortholog is 100%.

Group of orthologs #635. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 C.variabilis:203

Q757W8              	100.00%		E1ZFQ3              	100.00%
Q75B14              	12.39%		
Bootstrap support for Q757W8 as seed ortholog is 100%.
Bootstrap support for E1ZFQ3 as seed ortholog is 100%.

Group of orthologs #636. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 C.variabilis:203

Q751Z8              	100.00%		E1Z695              	100.00%
Bootstrap support for Q751Z8 as seed ortholog is 100%.
Bootstrap support for E1Z695 as seed ortholog is 100%.

Group of orthologs #637. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 C.variabilis:203

Q758A8              	100.00%		E1ZH78              	100.00%
Bootstrap support for Q758A8 as seed ortholog is 100%.
Bootstrap support for E1ZH78 as seed ortholog is 100%.

Group of orthologs #638. Best score 202 bits
Score difference with first non-orthologous sequence - A.gossypii:202 C.variabilis:202

Q752M9              	100.00%		E1Z5C6              	100.00%
Bootstrap support for Q752M9 as seed ortholog is 100%.
Bootstrap support for E1Z5C6 as seed ortholog is 100%.

Group of orthologs #639. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 C.variabilis:201

Q756F0              	100.00%		E1Z823              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 100%.
Bootstrap support for E1Z823 as seed ortholog is 100%.

Group of orthologs #640. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 C.variabilis:201

Q75DJ3              	100.00%		E1Z4A6              	100.00%
Bootstrap support for Q75DJ3 as seed ortholog is 100%.
Bootstrap support for E1Z4A6 as seed ortholog is 100%.

Group of orthologs #641. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 C.variabilis:201

Q758X9              	100.00%		E1ZJW8              	100.00%
Bootstrap support for Q758X9 as seed ortholog is 100%.
Bootstrap support for E1ZJW8 as seed ortholog is 100%.

Group of orthologs #642. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:201

Q756J1              	100.00%		E1ZME9              	100.00%
Bootstrap support for Q756J1 as seed ortholog is 99%.
Bootstrap support for E1ZME9 as seed ortholog is 100%.

Group of orthologs #643. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 C.variabilis:102

Q75E05              	100.00%		E1ZI57              	100.00%
Bootstrap support for Q75E05 as seed ortholog is 100%.
Bootstrap support for E1ZI57 as seed ortholog is 99%.

Group of orthologs #644. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 C.variabilis:201

Q75BB5              	100.00%		E1ZQ09              	100.00%
Bootstrap support for Q75BB5 as seed ortholog is 100%.
Bootstrap support for E1ZQ09 as seed ortholog is 100%.

Group of orthologs #645. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 C.variabilis:55

Q75B78              	100.00%		E1Z6U1              	100.00%
                    	       		E1Z248              	5.80%
Bootstrap support for Q75B78 as seed ortholog is 100%.
Bootstrap support for E1Z6U1 as seed ortholog is 86%.

Group of orthologs #646. Best score 200 bits
Score difference with first non-orthologous sequence - A.gossypii:200 C.variabilis:200

Q75EE7              	100.00%		E1ZD07              	100.00%
Bootstrap support for Q75EE7 as seed ortholog is 100%.
Bootstrap support for E1ZD07 as seed ortholog is 100%.

Group of orthologs #647. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 C.variabilis:199

Q74Z01              	100.00%		E1ZP97              	100.00%
Q74Z02              	68.39%		
Bootstrap support for Q74Z01 as seed ortholog is 100%.
Bootstrap support for E1ZP97 as seed ortholog is 100%.

Group of orthologs #648. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 C.variabilis:199

Q752J5              	100.00%		E1Z901              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for E1Z901 as seed ortholog is 100%.

Group of orthologs #649. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 C.variabilis:198

Q751Q9              	100.00%		E1Z6Q0              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for E1Z6Q0 as seed ortholog is 100%.

Group of orthologs #650. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 C.variabilis:56

Q75F03              	100.00%		E1ZAJ4              	100.00%
Bootstrap support for Q75F03 as seed ortholog is 100%.
Bootstrap support for E1ZAJ4 as seed ortholog is 84%.

Group of orthologs #651. Best score 197 bits
Score difference with first non-orthologous sequence - A.gossypii:197 C.variabilis:197

Q753F3              	100.00%		E1ZA77              	100.00%
Bootstrap support for Q753F3 as seed ortholog is 100%.
Bootstrap support for E1ZA77 as seed ortholog is 100%.

Group of orthologs #652. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 C.variabilis:196

Q754V6              	100.00%		E1Z2F6              	100.00%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for E1Z2F6 as seed ortholog is 100%.

Group of orthologs #653. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:196

Q750H1              	100.00%		E1ZEI0              	100.00%
Bootstrap support for Q750H1 as seed ortholog is 99%.
Bootstrap support for E1ZEI0 as seed ortholog is 100%.

Group of orthologs #654. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 C.variabilis:196

Q755W8              	100.00%		E1ZDS1              	100.00%
Bootstrap support for Q755W8 as seed ortholog is 100%.
Bootstrap support for E1ZDS1 as seed ortholog is 100%.

Group of orthologs #655. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 C.variabilis:195

Q758A5              	100.00%		E1ZKN0              	100.00%
Bootstrap support for Q758A5 as seed ortholog is 100%.
Bootstrap support for E1ZKN0 as seed ortholog is 100%.

Group of orthologs #656. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 C.variabilis:195

Q75EV4              	100.00%		E1ZTZ8              	100.00%
Bootstrap support for Q75EV4 as seed ortholog is 100%.
Bootstrap support for E1ZTZ8 as seed ortholog is 100%.

Group of orthologs #657. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:194

Q74ZN1              	100.00%		E1ZEK4              	100.00%
Q752M6              	30.75%		E1ZCC8              	26.78%
Bootstrap support for Q74ZN1 as seed ortholog is 98%.
Bootstrap support for E1ZEK4 as seed ortholog is 100%.

Group of orthologs #658. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:194

Q75C46              	100.00%		E1ZD13              	100.00%
Bootstrap support for Q75C46 as seed ortholog is 100%.
Bootstrap support for E1ZD13 as seed ortholog is 100%.

Group of orthologs #659. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:194

Q75D60              	100.00%		E1ZDI9              	100.00%
Bootstrap support for Q75D60 as seed ortholog is 100%.
Bootstrap support for E1ZDI9 as seed ortholog is 100%.

Group of orthologs #660. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:194

Q75EP8              	100.00%		E1ZHW5              	100.00%
Bootstrap support for Q75EP8 as seed ortholog is 100%.
Bootstrap support for E1ZHW5 as seed ortholog is 100%.

Group of orthologs #661. Best score 194 bits
Score difference with first non-orthologous sequence - A.gossypii:194 C.variabilis:194

Q75DA5              	100.00%		E1ZRS0              	100.00%
Bootstrap support for Q75DA5 as seed ortholog is 100%.
Bootstrap support for E1ZRS0 as seed ortholog is 100%.

Group of orthologs #662. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 C.variabilis:193

Q752S5              	100.00%		E1ZP05              	100.00%
                    	       		E1ZQW6              	6.95%
Bootstrap support for Q752S5 as seed ortholog is 100%.
Bootstrap support for E1ZP05 as seed ortholog is 100%.

Group of orthologs #663. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:13

Q750J8              	100.00%		E1ZAZ2              	100.00%
Bootstrap support for Q750J8 as seed ortholog is 98%.
Bootstrap support for E1ZAZ2 as seed ortholog is 78%.

Group of orthologs #664. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 C.variabilis:193

Q756X2              	100.00%		E1Z9N6              	100.00%
Bootstrap support for Q756X2 as seed ortholog is 100%.
Bootstrap support for E1Z9N6 as seed ortholog is 100%.

Group of orthologs #665. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 C.variabilis:193

Q752Z8              	100.00%		E1ZLN0              	100.00%
Bootstrap support for Q752Z8 as seed ortholog is 100%.
Bootstrap support for E1ZLN0 as seed ortholog is 100%.

Group of orthologs #666. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 C.variabilis:192

Q750E7              	100.00%		E1ZDS5              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 100%.
Bootstrap support for E1ZDS5 as seed ortholog is 100%.

Group of orthologs #667. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:63 C.variabilis:79

Q757K9              	100.00%		E1ZE31              	100.00%
Bootstrap support for Q757K9 as seed ortholog is 98%.
Bootstrap support for E1ZE31 as seed ortholog is 99%.

Group of orthologs #668. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 C.variabilis:191

Q74ZY3              	100.00%		E1Z4H6              	100.00%
Bootstrap support for Q74ZY3 as seed ortholog is 100%.
Bootstrap support for E1Z4H6 as seed ortholog is 100%.

Group of orthologs #669. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:63 C.variabilis:90

Q75BL1              	100.00%		E1ZBU5              	100.00%
Bootstrap support for Q75BL1 as seed ortholog is 97%.
Bootstrap support for E1ZBU5 as seed ortholog is 99%.

Group of orthologs #670. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 C.variabilis:191

Q757B5              	100.00%		E1ZMJ7              	100.00%
Bootstrap support for Q757B5 as seed ortholog is 100%.
Bootstrap support for E1ZMJ7 as seed ortholog is 100%.

Group of orthologs #671. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 C.variabilis:191

Q755G8              	100.00%		E1ZQD1              	100.00%
Bootstrap support for Q755G8 as seed ortholog is 100%.
Bootstrap support for E1ZQD1 as seed ortholog is 100%.

Group of orthologs #672. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 C.variabilis:191

Q75BG5              	100.00%		E1ZQC3              	100.00%
Bootstrap support for Q75BG5 as seed ortholog is 100%.
Bootstrap support for E1ZQC3 as seed ortholog is 100%.

Group of orthologs #673. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 C.variabilis:191

Q75BD8              	100.00%		E1ZT44              	100.00%
Bootstrap support for Q75BD8 as seed ortholog is 100%.
Bootstrap support for E1ZT44 as seed ortholog is 100%.

Group of orthologs #674. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 C.variabilis:191

Q75DY0              	100.00%		E1ZRQ7              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for E1ZRQ7 as seed ortholog is 100%.

Group of orthologs #675. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 C.variabilis:190

Q75F88              	100.00%		E1Z8Y2              	100.00%
                    	       		E1ZHG7              	7.23%
Bootstrap support for Q75F88 as seed ortholog is 100%.
Bootstrap support for E1Z8Y2 as seed ortholog is 100%.

Group of orthologs #676. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 C.variabilis:190

Q74Z42              	100.00%		E1ZH54              	100.00%
Bootstrap support for Q74Z42 as seed ortholog is 100%.
Bootstrap support for E1ZH54 as seed ortholog is 100%.

Group of orthologs #677. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 C.variabilis:190

Q757X1              	100.00%		E1ZFC4              	100.00%
Bootstrap support for Q757X1 as seed ortholog is 100%.
Bootstrap support for E1ZFC4 as seed ortholog is 100%.

Group of orthologs #678. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 C.variabilis:189

Q75AX1              	100.00%		E1ZGZ4              	100.00%
Q757K0              	100.00%		E1ZFV0              	94.12%
Bootstrap support for Q75AX1 as seed ortholog is 100%.
Bootstrap support for Q757K0 as seed ortholog is 100%.
Bootstrap support for E1ZGZ4 as seed ortholog is 100%.

Group of orthologs #679. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 C.variabilis:15

Q756G4              	100.00%		E1Z838              	100.00%
Bootstrap support for Q756G4 as seed ortholog is 100%.
Bootstrap support for E1Z838 as seed ortholog is 95%.

Group of orthologs #680. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 C.variabilis:14

Q75DD1              	100.00%		E1Z6R7              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for E1Z6R7 as seed ortholog is 75%.

Group of orthologs #681. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 C.variabilis:189

Q75CA5              	100.00%		E1ZDF8              	100.00%
Bootstrap support for Q75CA5 as seed ortholog is 100%.
Bootstrap support for E1ZDF8 as seed ortholog is 100%.

Group of orthologs #682. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:90 C.variabilis:105

Q75DP0              	100.00%		E1ZIU5              	100.00%
Bootstrap support for Q75DP0 as seed ortholog is 99%.
Bootstrap support for E1ZIU5 as seed ortholog is 99%.

Group of orthologs #683. Best score 189 bits
Score difference with first non-orthologous sequence - A.gossypii:189 C.variabilis:189

Q75CJ5              	100.00%		E1ZRC1              	100.00%
Bootstrap support for Q75CJ5 as seed ortholog is 100%.
Bootstrap support for E1ZRC1 as seed ortholog is 100%.

Group of orthologs #684. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 C.variabilis:188

Q757T2              	100.00%		E1ZDK5              	100.00%
Bootstrap support for Q757T2 as seed ortholog is 100%.
Bootstrap support for E1ZDK5 as seed ortholog is 100%.

Group of orthologs #685. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 C.variabilis:147

Q759L8              	100.00%		E1ZGF3              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for E1ZGF3 as seed ortholog is 100%.

Group of orthologs #686. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 C.variabilis:119

Q757A9              	100.00%		E1ZNM9              	100.00%
Bootstrap support for Q757A9 as seed ortholog is 100%.
Bootstrap support for E1ZNM9 as seed ortholog is 99%.

Group of orthologs #687. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:94 C.variabilis:110

Q75BM2              	100.00%		E1ZPB7              	100.00%
Bootstrap support for Q75BM2 as seed ortholog is 98%.
Bootstrap support for E1ZPB7 as seed ortholog is 99%.

Group of orthologs #688. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:73

Q75BA4              	100.00%		E1ZSB3              	100.00%
Bootstrap support for Q75BA4 as seed ortholog is 100%.
Bootstrap support for E1ZSB3 as seed ortholog is 99%.

Group of orthologs #689. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:67

Q754V5              	100.00%		E1Z4E7              	100.00%
                    	       		E1Z443              	8.89%
Bootstrap support for Q754V5 as seed ortholog is 86%.
Bootstrap support for E1Z4E7 as seed ortholog is 99%.

Group of orthologs #690. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 C.variabilis:187

Q757Z7              	100.00%		E1Z811              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for E1Z811 as seed ortholog is 100%.

Group of orthologs #691. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:27 C.variabilis:67

Q75E75              	100.00%		E1Z404              	100.00%
Bootstrap support for Q75E75 as seed ortholog is 74%.
Alternative seed ortholog is Q755W7 (27 bits away from this cluster)
Bootstrap support for E1Z404 as seed ortholog is 96%.

Group of orthologs #692. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 C.variabilis:187

Q75DW4              	100.00%		E1ZTW0              	100.00%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for E1ZTW0 as seed ortholog is 100%.

Group of orthologs #693. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 C.variabilis:186

Q757L4              	100.00%		E1ZRA5              	100.00%
Q74ZL4              	98.53%		E1ZRB7              	98.25%
                    	       		E1ZCE3              	91.23%
                    	       		E1ZGZ5              	40.35%
                    	       		E1Z2X3              	33.33%
Bootstrap support for Q757L4 as seed ortholog is 100%.
Bootstrap support for E1ZRA5 as seed ortholog is 100%.

Group of orthologs #694. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:3 C.variabilis:56

Q755K5              	100.00%		E1ZKT6              	100.00%
                    	       		E1ZT37              	25.88%
                    	       		E1ZT38              	22.98%
                    	       		E1ZL71              	22.68%
                    	       		E1ZT36              	17.35%
                    	       		E1ZJY6              	15.98%
                    	       		E1ZL72              	15.22%
Bootstrap support for Q755K5 as seed ortholog is 51%.
Alternative seed ortholog is Q75ES0 (3 bits away from this cluster)
Bootstrap support for E1ZKT6 as seed ortholog is 90%.

Group of orthologs #695. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 C.variabilis:126

Q754H4              	100.00%		E1Z787              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for E1Z787 as seed ortholog is 99%.

Group of orthologs #696. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 C.variabilis:185

Q753F8              	100.00%		E1Z9S8              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for E1Z9S8 as seed ortholog is 100%.

Group of orthologs #697. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 C.variabilis:185

Q74Z77              	100.00%		E1ZFX2              	100.00%
Bootstrap support for Q74Z77 as seed ortholog is 100%.
Bootstrap support for E1ZFX2 as seed ortholog is 100%.

Group of orthologs #698. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 C.variabilis:185

Q759T6              	100.00%		E1ZTX8              	100.00%
Bootstrap support for Q759T6 as seed ortholog is 100%.
Bootstrap support for E1ZTX8 as seed ortholog is 100%.

Group of orthologs #699. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:184

Q75F47              	100.00%		E1Z8G6              	100.00%
Bootstrap support for Q75F47 as seed ortholog is 99%.
Bootstrap support for E1Z8G6 as seed ortholog is 100%.

Group of orthologs #700. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 C.variabilis:67

Q75AP9              	100.00%		E1ZGM1              	100.00%
Bootstrap support for Q75AP9 as seed ortholog is 100%.
Bootstrap support for E1ZGM1 as seed ortholog is 99%.

Group of orthologs #701. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:184 C.variabilis:184

Q754L1              	100.00%		E1ZTS9              	100.00%
Bootstrap support for Q754L1 as seed ortholog is 100%.
Bootstrap support for E1ZTS9 as seed ortholog is 100%.

Group of orthologs #702. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 C.variabilis:47

Q75CZ4              	100.00%		E1ZEQ0              	100.00%
Q759Z1              	33.49%		
Bootstrap support for Q75CZ4 as seed ortholog is 100%.
Bootstrap support for E1ZEQ0 as seed ortholog is 77%.

Group of orthologs #703. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 C.variabilis:183

Q759T2              	100.00%		E1Z946              	100.00%
Bootstrap support for Q759T2 as seed ortholog is 100%.
Bootstrap support for E1Z946 as seed ortholog is 100%.

Group of orthologs #704. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 C.variabilis:183

Q755M8              	100.00%		E1ZMG6              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for E1ZMG6 as seed ortholog is 100%.

Group of orthologs #705. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 C.variabilis:183

Q757U7              	100.00%		E1ZPD6              	100.00%
Bootstrap support for Q757U7 as seed ortholog is 100%.
Bootstrap support for E1ZPD6 as seed ortholog is 100%.

Group of orthologs #706. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:113 C.variabilis:94

Q75BV1              	100.00%		E1ZTF6              	100.00%
Bootstrap support for Q75BV1 as seed ortholog is 99%.
Bootstrap support for E1ZTF6 as seed ortholog is 99%.

Group of orthologs #707. Best score 183 bits
Score difference with first non-orthologous sequence - A.gossypii:183 C.variabilis:90

Q75E78              	100.00%		E1ZR28              	100.00%
Bootstrap support for Q75E78 as seed ortholog is 100%.
Bootstrap support for E1ZR28 as seed ortholog is 97%.

Group of orthologs #708. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 C.variabilis:139

Q74ZF7              	100.00%		E1ZGY9              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for E1ZGY9 as seed ortholog is 99%.

Group of orthologs #709. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 C.variabilis:182

Q757T6              	100.00%		E1ZEC1              	100.00%
Bootstrap support for Q757T6 as seed ortholog is 100%.
Bootstrap support for E1ZEC1 as seed ortholog is 100%.

Group of orthologs #710. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:84

Q75EN5              	100.00%		E1Z5L3              	100.00%
                    	       		E1Z7T2              	5.97%
                    	       		E1Z8B1              	5.16%
                    	       		E1ZNH2              	5.16%
Bootstrap support for Q75EN5 as seed ortholog is 100%.
Bootstrap support for E1Z5L3 as seed ortholog is 97%.

Group of orthologs #711. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:181

Q75ET1              	100.00%		E1Z2U1              	100.00%
Bootstrap support for Q75ET1 as seed ortholog is 100%.
Bootstrap support for E1Z2U1 as seed ortholog is 100%.

Group of orthologs #712. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:120

Q757V0              	100.00%		E1ZIB9              	100.00%
Bootstrap support for Q757V0 as seed ortholog is 100%.
Bootstrap support for E1ZIB9 as seed ortholog is 99%.

Group of orthologs #713. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:181

Q75CR2              	100.00%		E1ZFX6              	100.00%
Bootstrap support for Q75CR2 as seed ortholog is 100%.
Bootstrap support for E1ZFX6 as seed ortholog is 100%.

Group of orthologs #714. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:181 C.variabilis:181

Q75AQ8              	100.00%		E1ZJK4              	100.00%
Bootstrap support for Q75AQ8 as seed ortholog is 100%.
Bootstrap support for E1ZJK4 as seed ortholog is 100%.

Group of orthologs #715. Best score 181 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:181

Q759K2              	100.00%		E1ZTF0              	100.00%
Bootstrap support for Q759K2 as seed ortholog is 99%.
Bootstrap support for E1ZTF0 as seed ortholog is 100%.

Group of orthologs #716. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 C.variabilis:180

Q753M8              	100.00%		E1ZDY4              	100.00%
Bootstrap support for Q753M8 as seed ortholog is 100%.
Bootstrap support for E1ZDY4 as seed ortholog is 100%.

Group of orthologs #717. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 C.variabilis:180

Q758U5              	100.00%		E1ZB13              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for E1ZB13 as seed ortholog is 100%.

Group of orthologs #718. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 C.variabilis:180

Q758F3              	100.00%		E1ZGV7              	100.00%
Bootstrap support for Q758F3 as seed ortholog is 100%.
Bootstrap support for E1ZGV7 as seed ortholog is 100%.

Group of orthologs #719. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 C.variabilis:180

Q75C11              	100.00%		E1ZIN7              	100.00%
Bootstrap support for Q75C11 as seed ortholog is 100%.
Bootstrap support for E1ZIN7 as seed ortholog is 100%.

Group of orthologs #720. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:13 C.variabilis:29

Q75CM6              	100.00%		E1ZNA5              	100.00%
                    	       		E1ZNA2              	94.13%
Bootstrap support for Q75CM6 as seed ortholog is 63%.
Alternative seed ortholog is Q755W7 (13 bits away from this cluster)
Bootstrap support for E1ZNA5 as seed ortholog is 76%.

Group of orthologs #721. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 C.variabilis:179

Q75B62              	100.00%		E1Z8N4              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for E1Z8N4 as seed ortholog is 100%.

Group of orthologs #722. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:179 C.variabilis:179

Q75BI7              	100.00%		E1ZHD9              	100.00%
Bootstrap support for Q75BI7 as seed ortholog is 100%.
Bootstrap support for E1ZHD9 as seed ortholog is 100%.

Group of orthologs #723. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 C.variabilis:118

Q754S1              	100.00%		E1Z4D4              	100.00%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for E1Z4D4 as seed ortholog is 99%.

Group of orthologs #724. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 C.variabilis:178

Q75C85              	100.00%		E1Z913              	100.00%
Bootstrap support for Q75C85 as seed ortholog is 100%.
Bootstrap support for E1Z913 as seed ortholog is 100%.

Group of orthologs #725. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 C.variabilis:74

Q75DH3              	100.00%		E1Z8N0              	100.00%
Bootstrap support for Q75DH3 as seed ortholog is 100%.
Bootstrap support for E1Z8N0 as seed ortholog is 99%.

Group of orthologs #726. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:22 C.variabilis:55

Q75DG7              	100.00%		E1ZP92              	100.00%
Bootstrap support for Q75DG7 as seed ortholog is 81%.
Bootstrap support for E1ZP92 as seed ortholog is 98%.

Group of orthologs #727. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 C.variabilis:178

Q75EW8              	100.00%		E1ZTN0              	100.00%
Bootstrap support for Q75EW8 as seed ortholog is 100%.
Bootstrap support for E1ZTN0 as seed ortholog is 100%.

Group of orthologs #728. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 C.variabilis:177

Q74ZM9              	100.00%		E1Z746              	100.00%
Bootstrap support for Q74ZM9 as seed ortholog is 100%.
Bootstrap support for E1Z746 as seed ortholog is 100%.

Group of orthologs #729. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 C.variabilis:177

Q75A89              	100.00%		E1Z5F8              	100.00%
Bootstrap support for Q75A89 as seed ortholog is 100%.
Bootstrap support for E1Z5F8 as seed ortholog is 100%.

Group of orthologs #730. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 C.variabilis:177

Q75AL3              	100.00%		E1ZGG6              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for E1ZGG6 as seed ortholog is 100%.

Group of orthologs #731. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 C.variabilis:177

Q75B12              	100.00%		E1ZIW9              	100.00%
Bootstrap support for Q75B12 as seed ortholog is 100%.
Bootstrap support for E1ZIW9 as seed ortholog is 100%.

Group of orthologs #732. Best score 177 bits
Score difference with first non-orthologous sequence - A.gossypii:177 C.variabilis:177

Q75E21              	100.00%		E1ZHC6              	100.00%
Bootstrap support for Q75E21 as seed ortholog is 100%.
Bootstrap support for E1ZHC6 as seed ortholog is 100%.

Group of orthologs #733. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:12 C.variabilis:49

Q757I3              	100.00%		E1ZKR3              	100.00%
Q756H9              	15.54%		
Bootstrap support for Q757I3 as seed ortholog is 61%.
Alternative seed ortholog is Q750Q6 (12 bits away from this cluster)
Bootstrap support for E1ZKR3 as seed ortholog is 84%.

Group of orthologs #734. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 C.variabilis:176

Q756E0              	100.00%		E1Z7W5              	100.00%
Bootstrap support for Q756E0 as seed ortholog is 100%.
Bootstrap support for E1Z7W5 as seed ortholog is 100%.

Group of orthologs #735. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 C.variabilis:45

Q75EE9              	100.00%		E1ZCU2              	100.00%
Bootstrap support for Q75EE9 as seed ortholog is 100%.
Bootstrap support for E1ZCU2 as seed ortholog is 99%.

Group of orthologs #736. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 C.variabilis:176

Q755M0              	100.00%		E1ZM20              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for E1ZM20 as seed ortholog is 100%.

Group of orthologs #737. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 C.variabilis:176

Q75B45              	100.00%		E1ZKC6              	100.00%
Bootstrap support for Q75B45 as seed ortholog is 100%.
Bootstrap support for E1ZKC6 as seed ortholog is 100%.

Group of orthologs #738. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 C.variabilis:176

Q753H0              	100.00%		E1ZRR4              	100.00%
Bootstrap support for Q753H0 as seed ortholog is 100%.
Bootstrap support for E1ZRR4 as seed ortholog is 100%.

Group of orthologs #739. Best score 176 bits
Score difference with first non-orthologous sequence - A.gossypii:176 C.variabilis:176

Q757J3              	100.00%		E1ZS14              	100.00%
Bootstrap support for Q757J3 as seed ortholog is 100%.
Bootstrap support for E1ZS14 as seed ortholog is 100%.

Group of orthologs #740. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:130 C.variabilis:129

Q754Z0              	100.00%		E1ZGA6              	100.00%
Bootstrap support for Q754Z0 as seed ortholog is 100%.
Bootstrap support for E1ZGA6 as seed ortholog is 100%.

Group of orthologs #741. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 C.variabilis:175

Q750E0              	100.00%		E1ZLA4              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for E1ZLA4 as seed ortholog is 100%.

Group of orthologs #742. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 C.variabilis:93

Q751M0              	100.00%		E1ZLG0              	100.00%
Bootstrap support for Q751M0 as seed ortholog is 100%.
Bootstrap support for E1ZLG0 as seed ortholog is 99%.

Group of orthologs #743. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 C.variabilis:175

Q752N5              	100.00%		E1ZT56              	100.00%
Bootstrap support for Q752N5 as seed ortholog is 100%.
Bootstrap support for E1ZT56 as seed ortholog is 100%.

Group of orthologs #744. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 C.variabilis:73

Q75CL7              	100.00%		E1ZTM0              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for E1ZTM0 as seed ortholog is 84%.

Group of orthologs #745. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 C.variabilis:174

Q756C3              	100.00%		E1Z2G2              	100.00%
Bootstrap support for Q756C3 as seed ortholog is 100%.
Bootstrap support for E1Z2G2 as seed ortholog is 100%.

Group of orthologs #746. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 C.variabilis:174

Q751I1              	100.00%		E1ZHJ8              	100.00%
Bootstrap support for Q751I1 as seed ortholog is 100%.
Bootstrap support for E1ZHJ8 as seed ortholog is 100%.

Group of orthologs #747. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 C.variabilis:174

Q755F6              	100.00%		E1ZQS1              	100.00%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for E1ZQS1 as seed ortholog is 100%.

Group of orthologs #748. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 C.variabilis:114

Q754B8              	100.00%		E1ZR93              	100.00%
                    	       		E1ZNT9              	28.01%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for E1ZR93 as seed ortholog is 99%.

Group of orthologs #749. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:132 C.variabilis:100

Q74Z34              	100.00%		E1Z9V8              	100.00%
Bootstrap support for Q74Z34 as seed ortholog is 100%.
Bootstrap support for E1Z9V8 as seed ortholog is 99%.

Group of orthologs #750. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 C.variabilis:173

Q751M1              	100.00%		E1ZDT5              	100.00%
Bootstrap support for Q751M1 as seed ortholog is 100%.
Bootstrap support for E1ZDT5 as seed ortholog is 100%.

Group of orthologs #751. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:13 C.variabilis:67

Q75AC6              	100.00%		E1ZJC8              	100.00%
Bootstrap support for Q75AC6 as seed ortholog is 64%.
Alternative seed ortholog is Q756A1 (13 bits away from this cluster)
Bootstrap support for E1ZJC8 as seed ortholog is 98%.

Group of orthologs #752. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 C.variabilis:172

Q75BT3              	100.00%		E1Z307              	100.00%
Bootstrap support for Q75BT3 as seed ortholog is 100%.
Bootstrap support for E1Z307 as seed ortholog is 100%.

Group of orthologs #753. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 C.variabilis:171

Q75ES6              	100.00%		E1Z4B0              	100.00%
Bootstrap support for Q75ES6 as seed ortholog is 100%.
Bootstrap support for E1Z4B0 as seed ortholog is 100%.

Group of orthologs #754. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 C.variabilis:171

Q755K1              	100.00%		E1ZJB9              	100.00%
Bootstrap support for Q755K1 as seed ortholog is 100%.
Bootstrap support for E1ZJB9 as seed ortholog is 100%.

Group of orthologs #755. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 C.variabilis:171

Q75DP9              	100.00%		E1ZRQ4              	100.00%
Bootstrap support for Q75DP9 as seed ortholog is 100%.
Bootstrap support for E1ZRQ4 as seed ortholog is 100%.

Group of orthologs #756. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 C.variabilis:170

Q757Z2              	100.00%		E1ZEU5              	100.00%
Q751M2              	13.90%		
Bootstrap support for Q757Z2 as seed ortholog is 100%.
Bootstrap support for E1ZEU5 as seed ortholog is 100%.

Group of orthologs #757. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 C.variabilis:170

Q758C2              	100.00%		E1ZLU9              	100.00%
Bootstrap support for Q758C2 as seed ortholog is 100%.
Bootstrap support for E1ZLU9 as seed ortholog is 100%.

Group of orthologs #758. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.variabilis:169

Q74ZN5              	100.00%		E1Z9I7              	100.00%
Q75C30              	100.00%		
Bootstrap support for Q74ZN5 as seed ortholog is 100%.
Bootstrap support for Q75C30 as seed ortholog is 100%.
Bootstrap support for E1Z9I7 as seed ortholog is 100%.

Group of orthologs #759. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.variabilis:169

Q74ZP9              	100.00%		E1Z2D3              	100.00%
Bootstrap support for Q74ZP9 as seed ortholog is 100%.
Bootstrap support for E1Z2D3 as seed ortholog is 100%.

Group of orthologs #760. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.variabilis:169

Q756V2              	100.00%		E1ZAC3              	100.00%
Bootstrap support for Q756V2 as seed ortholog is 100%.
Bootstrap support for E1ZAC3 as seed ortholog is 100%.

Group of orthologs #761. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.variabilis:169

Q75C07              	100.00%		E1Z7V5              	100.00%
Bootstrap support for Q75C07 as seed ortholog is 100%.
Bootstrap support for E1Z7V5 as seed ortholog is 100%.

Group of orthologs #762. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.variabilis:94

Q752L3              	100.00%		E1ZIF5              	100.00%
Bootstrap support for Q752L3 as seed ortholog is 100%.
Bootstrap support for E1ZIF5 as seed ortholog is 99%.

Group of orthologs #763. Best score 169 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.variabilis:169

Q75EN6              	100.00%		E1ZH92              	100.00%
Bootstrap support for Q75EN6 as seed ortholog is 100%.
Bootstrap support for E1ZH92 as seed ortholog is 100%.

Group of orthologs #764. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:51 C.variabilis:168

Q750H7              	100.00%		E1ZSL2              	100.00%
                    	       		E1ZFH0              	5.70%
                    	       		E1ZDY5              	5.44%
Bootstrap support for Q750H7 as seed ortholog is 85%.
Bootstrap support for E1ZSL2 as seed ortholog is 100%.

Group of orthologs #765. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 C.variabilis:168

Q74ZT1              	100.00%		E1Z505              	100.00%
                    	       		E1Z9K3              	6.24%
Bootstrap support for Q74ZT1 as seed ortholog is 100%.
Bootstrap support for E1Z505 as seed ortholog is 100%.

Group of orthologs #766. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:30

Q750M2              	100.00%		E1ZEF3              	100.00%
Bootstrap support for Q750M2 as seed ortholog is 97%.
Bootstrap support for E1ZEF3 as seed ortholog is 82%.

Group of orthologs #767. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 C.variabilis:168

Q754N8              	100.00%		E1ZGU4              	100.00%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for E1ZGU4 as seed ortholog is 100%.

Group of orthologs #768. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:2 C.variabilis:73

Q75BS5              	100.00%		E1ZE46              	100.00%
Bootstrap support for Q75BS5 as seed ortholog is 57%.
Alternative seed ortholog is Q75C02 (2 bits away from this cluster)
Bootstrap support for E1ZE46 as seed ortholog is 97%.

Group of orthologs #769. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 C.variabilis:115

Q755I0              	100.00%		E1ZFB4              	100.00%
Bootstrap support for Q755I0 as seed ortholog is 100%.
Bootstrap support for E1ZFB4 as seed ortholog is 99%.

Group of orthologs #770. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 C.variabilis:108

Q75BY0              	100.00%		E1ZCH8              	100.00%
Bootstrap support for Q75BY0 as seed ortholog is 100%.
Bootstrap support for E1ZCH8 as seed ortholog is 99%.

Group of orthologs #771. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 C.variabilis:167

Q75EY8              	100.00%		E1ZDV4              	100.00%
Bootstrap support for Q75EY8 as seed ortholog is 100%.
Bootstrap support for E1ZDV4 as seed ortholog is 100%.

Group of orthologs #772. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 C.variabilis:166

Q74ZC8              	100.00%		E1Z8E9              	100.00%
Bootstrap support for Q74ZC8 as seed ortholog is 100%.
Bootstrap support for E1Z8E9 as seed ortholog is 100%.

Group of orthologs #773. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 C.variabilis:166

Q758L9              	100.00%		E1Z4F4              	100.00%
Bootstrap support for Q758L9 as seed ortholog is 100%.
Bootstrap support for E1Z4F4 as seed ortholog is 100%.

Group of orthologs #774. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:40 C.variabilis:71

Q754G3              	100.00%		E1Z9U7              	100.00%
Bootstrap support for Q754G3 as seed ortholog is 45%.
Alternative seed ortholog is Q75AT0 (40 bits away from this cluster)
Bootstrap support for E1Z9U7 as seed ortholog is 51%.
Alternative seed ortholog is E1ZLE9 (71 bits away from this cluster)

Group of orthologs #775. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 C.variabilis:63

Q759W2              	100.00%		E1Z7T8              	100.00%
Bootstrap support for Q759W2 as seed ortholog is 100%.
Bootstrap support for E1Z7T8 as seed ortholog is 96%.

Group of orthologs #776. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:79 C.variabilis:25

Q755U9              	100.00%		E1ZQN2              	100.00%
Bootstrap support for Q755U9 as seed ortholog is 97%.
Bootstrap support for E1ZQN2 as seed ortholog is 90%.

Group of orthologs #777. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 C.variabilis:166

Q757C0              	100.00%		E1ZSF4              	100.00%
Bootstrap support for Q757C0 as seed ortholog is 100%.
Bootstrap support for E1ZSF4 as seed ortholog is 100%.

Group of orthologs #778. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 C.variabilis:166

Q75B74              	100.00%		E1ZQ34              	100.00%
Bootstrap support for Q75B74 as seed ortholog is 100%.
Bootstrap support for E1ZQ34 as seed ortholog is 100%.

Group of orthologs #779. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 C.variabilis:165

Q752X2              	100.00%		E1Z633              	100.00%
Bootstrap support for Q752X2 as seed ortholog is 100%.
Bootstrap support for E1Z633 as seed ortholog is 100%.

Group of orthologs #780. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 C.variabilis:165

Q75A51              	100.00%		E1Z7M6              	100.00%
Bootstrap support for Q75A51 as seed ortholog is 100%.
Bootstrap support for E1Z7M6 as seed ortholog is 100%.

Group of orthologs #781. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q750T2              	100.00%		E1ZGF4              	100.00%
                    	       		E1ZPV6              	22.31%
                    	       		E1ZT98              	18.53%
Bootstrap support for Q750T2 as seed ortholog is 100%.
Bootstrap support for E1ZGF4 as seed ortholog is 100%.

Group of orthologs #782. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q75A38              	100.00%		E1ZB65              	100.00%
Q75A37              	76.14%		
Bootstrap support for Q75A38 as seed ortholog is 100%.
Bootstrap support for E1ZB65 as seed ortholog is 100%.

Group of orthologs #783. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:42 C.variabilis:14

Q75CK3              	100.00%		E1ZJX1              	100.00%
Q75F92              	5.00%		
Bootstrap support for Q75CK3 as seed ortholog is 96%.
Bootstrap support for E1ZJX1 as seed ortholog is 70%.
Alternative seed ortholog is E1ZEF0 (14 bits away from this cluster)

Group of orthologs #784. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q753A0              	100.00%		E1Z8Q3              	100.00%
Bootstrap support for Q753A0 as seed ortholog is 100%.
Bootstrap support for E1Z8Q3 as seed ortholog is 100%.

Group of orthologs #785. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q75A17              	100.00%		E1Z6D3              	100.00%
Bootstrap support for Q75A17 as seed ortholog is 100%.
Bootstrap support for E1Z6D3 as seed ortholog is 100%.

Group of orthologs #786. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q757T8              	100.00%		E1ZDB9              	100.00%
Bootstrap support for Q757T8 as seed ortholog is 100%.
Bootstrap support for E1ZDB9 as seed ortholog is 100%.

Group of orthologs #787. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q750D3              	100.00%		E1ZMD3              	100.00%
Bootstrap support for Q750D3 as seed ortholog is 100%.
Bootstrap support for E1ZMD3 as seed ortholog is 100%.

Group of orthologs #788. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:164 C.variabilis:164

Q757G9              	100.00%		E1ZJX0              	100.00%
Bootstrap support for Q757G9 as seed ortholog is 100%.
Bootstrap support for E1ZJX0 as seed ortholog is 100%.

Group of orthologs #789. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:75 C.variabilis:94

Q75CB3              	100.00%		E1ZHJ4              	100.00%
Q753H5              	21.23%		
Bootstrap support for Q75CB3 as seed ortholog is 97%.
Bootstrap support for E1ZHJ4 as seed ortholog is 99%.

Group of orthologs #790. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:97

Q75DK1              	100.00%		E1ZPC8              	100.00%
                    	       		E1ZPJ1              	7.67%
Bootstrap support for Q75DK1 as seed ortholog is 100%.
Bootstrap support for E1ZPC8 as seed ortholog is 99%.

Group of orthologs #791. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q753E0              	100.00%		E1Z655              	100.00%
Bootstrap support for Q753E0 as seed ortholog is 100%.
Bootstrap support for E1Z655 as seed ortholog is 100%.

Group of orthologs #792. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q751V7              	100.00%		E1Z8V1              	100.00%
Bootstrap support for Q751V7 as seed ortholog is 100%.
Bootstrap support for E1Z8V1 as seed ortholog is 100%.

Group of orthologs #793. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q75CC6              	100.00%		E1Z345              	100.00%
Bootstrap support for Q75CC6 as seed ortholog is 100%.
Bootstrap support for E1Z345 as seed ortholog is 100%.

Group of orthologs #794. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:99

Q757I9              	100.00%		E1Z921              	100.00%
Bootstrap support for Q757I9 as seed ortholog is 100%.
Bootstrap support for E1Z921 as seed ortholog is 99%.

Group of orthologs #795. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:39 C.variabilis:44

Q754E6              	100.00%		E1ZEL2              	100.00%
Bootstrap support for Q754E6 as seed ortholog is 96%.
Bootstrap support for E1ZEL2 as seed ortholog is 97%.

Group of orthologs #796. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:163

Q75CK4              	100.00%		E1Z8M4              	100.00%
Bootstrap support for Q75CK4 as seed ortholog is 99%.
Bootstrap support for E1Z8M4 as seed ortholog is 100%.

Group of orthologs #797. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q74ZA3              	100.00%		E1ZNY8              	100.00%
Bootstrap support for Q74ZA3 as seed ortholog is 100%.
Bootstrap support for E1ZNY8 as seed ortholog is 100%.

Group of orthologs #798. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q75C62              	100.00%		E1ZGX0              	100.00%
Bootstrap support for Q75C62 as seed ortholog is 100%.
Bootstrap support for E1ZGX0 as seed ortholog is 100%.

Group of orthologs #799. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q755X2              	100.00%		E1ZPQ2              	100.00%
Bootstrap support for Q755X2 as seed ortholog is 100%.
Bootstrap support for E1ZPQ2 as seed ortholog is 100%.

Group of orthologs #800. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 C.variabilis:163

Q757G8              	100.00%		E1ZRV6              	100.00%
Bootstrap support for Q757G8 as seed ortholog is 100%.
Bootstrap support for E1ZRV6 as seed ortholog is 100%.

Group of orthologs #801. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q754N5              	100.00%		E1Z3A4              	100.00%
Q75EJ7              	21.78%		E1ZIV2              	31.58%
                    	       		E1ZLV9              	20.60%
                    	       		E1ZKZ4              	17.47%
                    	       		E1ZSQ2              	16.80%
Bootstrap support for Q754N5 as seed ortholog is 100%.
Bootstrap support for E1Z3A4 as seed ortholog is 100%.

Group of orthologs #802. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q75DA0              	100.00%		E1Z6W1              	100.00%
Q752H5              	34.35%		
Bootstrap support for Q75DA0 as seed ortholog is 100%.
Bootstrap support for E1Z6W1 as seed ortholog is 100%.

Group of orthologs #803. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q756N3              	100.00%		E1Z8P1              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for E1Z8P1 as seed ortholog is 100%.

Group of orthologs #804. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q757Z6              	100.00%		E1ZBU9              	100.00%
Bootstrap support for Q757Z6 as seed ortholog is 100%.
Bootstrap support for E1ZBU9 as seed ortholog is 100%.

Group of orthologs #805. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q754T7              	100.00%		E1ZFS8              	100.00%
Bootstrap support for Q754T7 as seed ortholog is 100%.
Bootstrap support for E1ZFS8 as seed ortholog is 100%.

Group of orthologs #806. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:47

Q757U9              	100.00%		E1ZQN4              	100.00%
Bootstrap support for Q757U9 as seed ortholog is 100%.
Bootstrap support for E1ZQN4 as seed ortholog is 84%.

Group of orthologs #807. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q75ET0              	100.00%		E1ZK00              	100.00%
Bootstrap support for Q75ET0 as seed ortholog is 100%.
Bootstrap support for E1ZK00 as seed ortholog is 100%.

Group of orthologs #808. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 C.variabilis:162

Q75B26              	100.00%		E1ZRV2              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for E1ZRV2 as seed ortholog is 100%.

Group of orthologs #809. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:161

Q75BX2              	100.00%		E1ZEH7              	100.00%
Q75D28              	5.80%		
Bootstrap support for Q75BX2 as seed ortholog is 100%.
Bootstrap support for E1ZEH7 as seed ortholog is 100%.

Group of orthologs #810. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:161

Q74ZD2              	100.00%		E1Z6M6              	100.00%
Bootstrap support for Q74ZD2 as seed ortholog is 100%.
Bootstrap support for E1Z6M6 as seed ortholog is 100%.

Group of orthologs #811. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:161

Q756I6              	100.00%		E1Z7E2              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for E1Z7E2 as seed ortholog is 100%.

Group of orthologs #812. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:161

Q753Q2              	100.00%		E1ZIV7              	100.00%
Bootstrap support for Q753Q2 as seed ortholog is 100%.
Bootstrap support for E1ZIV7 as seed ortholog is 100%.

Group of orthologs #813. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:161

Q74ZT7              	100.00%		E1ZMH3              	100.00%
Bootstrap support for Q74ZT7 as seed ortholog is 100%.
Bootstrap support for E1ZMH3 as seed ortholog is 100%.

Group of orthologs #814. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:161

Q758L5              	100.00%		E1ZHB0              	100.00%
Bootstrap support for Q758L5 as seed ortholog is 100%.
Bootstrap support for E1ZHB0 as seed ortholog is 100%.

Group of orthologs #815. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:95

Q754X9              	100.00%		E1ZKV8              	100.00%
Bootstrap support for Q754X9 as seed ortholog is 100%.
Bootstrap support for E1ZKV8 as seed ortholog is 99%.

Group of orthologs #816. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 C.variabilis:65

Q75E33              	100.00%		E1ZL79              	100.00%
Bootstrap support for Q75E33 as seed ortholog is 100%.
Bootstrap support for E1ZL79 as seed ortholog is 99%.

Group of orthologs #817. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 C.variabilis:12

Q8J1F8              	100.00%		E1ZT43              	100.00%
Q74ZL5              	75.90%		
Bootstrap support for Q8J1F8 as seed ortholog is 100%.
Bootstrap support for E1ZT43 as seed ortholog is 38%.
Alternative seed ortholog is E1ZGZ6 (12 bits away from this cluster)

Group of orthologs #818. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 C.variabilis:160

Q759U2              	100.00%		E1ZGX8              	100.00%
Bootstrap support for Q759U2 as seed ortholog is 100%.
Bootstrap support for E1ZGX8 as seed ortholog is 100%.

Group of orthologs #819. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:160 C.variabilis:160

Q75FB4              	100.00%		E1ZCT0              	100.00%
Bootstrap support for Q75FB4 as seed ortholog is 100%.
Bootstrap support for E1ZCT0 as seed ortholog is 100%.

Group of orthologs #820. Best score 160 bits
Score difference with first non-orthologous sequence - A.gossypii:95 C.variabilis:83

Q75F38              	100.00%		E1ZRJ3              	100.00%
Bootstrap support for Q75F38 as seed ortholog is 100%.
Bootstrap support for E1ZRJ3 as seed ortholog is 99%.

Group of orthologs #821. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:97

Q75EJ5              	100.00%		E1ZDL9              	100.00%
Q757I1              	87.57%		E1ZBZ6              	39.94%
Q75DQ0              	62.88%		
Bootstrap support for Q75EJ5 as seed ortholog is 100%.
Bootstrap support for E1ZDL9 as seed ortholog is 99%.

Group of orthologs #822. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:159

Q753W2              	100.00%		E1Z711              	100.00%
Bootstrap support for Q753W2 as seed ortholog is 100%.
Bootstrap support for E1Z711 as seed ortholog is 100%.

Group of orthologs #823. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:159

Q753I2              	100.00%		E1ZE85              	100.00%
Bootstrap support for Q753I2 as seed ortholog is 100%.
Bootstrap support for E1ZE85 as seed ortholog is 100%.

Group of orthologs #824. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:159

Q759X7              	100.00%		E1ZHF0              	100.00%
Bootstrap support for Q759X7 as seed ortholog is 100%.
Bootstrap support for E1ZHF0 as seed ortholog is 100%.

Group of orthologs #825. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:70

Q758Y8              	100.00%		E1ZJV1              	100.00%
Bootstrap support for Q758Y8 as seed ortholog is 100%.
Bootstrap support for E1ZJV1 as seed ortholog is 94%.

Group of orthologs #826. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 C.variabilis:159

Q756F7              	100.00%		E1ZMY4              	100.00%
Bootstrap support for Q756F7 as seed ortholog is 100%.
Bootstrap support for E1ZMY4 as seed ortholog is 100%.

Group of orthologs #827. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.variabilis:158

Q74ZP6              	100.00%		E1Z3V8              	100.00%
Bootstrap support for Q74ZP6 as seed ortholog is 100%.
Bootstrap support for E1Z3V8 as seed ortholog is 100%.

Group of orthologs #828. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.variabilis:158

Q759D1              	100.00%		E1Z4N5              	100.00%
Bootstrap support for Q759D1 as seed ortholog is 100%.
Bootstrap support for E1Z4N5 as seed ortholog is 100%.

Group of orthologs #829. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:43 C.variabilis:42

Q756N2              	100.00%		E1Z950              	100.00%
Bootstrap support for Q756N2 as seed ortholog is 88%.
Bootstrap support for E1Z950 as seed ortholog is 86%.

Group of orthologs #830. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.variabilis:158

Q74ZV7              	100.00%		E1ZGK8              	100.00%
Bootstrap support for Q74ZV7 as seed ortholog is 100%.
Bootstrap support for E1ZGK8 as seed ortholog is 100%.

Group of orthologs #831. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.variabilis:158

Q75DI0              	100.00%		E1ZCG7              	100.00%
Bootstrap support for Q75DI0 as seed ortholog is 100%.
Bootstrap support for E1ZCG7 as seed ortholog is 100%.

Group of orthologs #832. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:53 C.variabilis:158

Q75F21              	100.00%		E1ZCR4              	100.00%
Bootstrap support for Q75F21 as seed ortholog is 88%.
Bootstrap support for E1ZCR4 as seed ortholog is 100%.

Group of orthologs #833. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.variabilis:158

Q75B51              	100.00%		E1ZJ66              	100.00%
Bootstrap support for Q75B51 as seed ortholog is 100%.
Bootstrap support for E1ZJ66 as seed ortholog is 100%.

Group of orthologs #834. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.variabilis:158

Q759L9              	100.00%		E1ZRL8              	100.00%
Bootstrap support for Q759L9 as seed ortholog is 100%.
Bootstrap support for E1ZRL8 as seed ortholog is 100%.

Group of orthologs #835. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 C.variabilis:157

Q750G7              	100.00%		E1Z384              	100.00%
Bootstrap support for Q750G7 as seed ortholog is 100%.
Bootstrap support for E1Z384 as seed ortholog is 100%.

Group of orthologs #836. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 C.variabilis:39

Q757T3              	100.00%		E1ZBJ0              	100.00%
Bootstrap support for Q757T3 as seed ortholog is 100%.
Bootstrap support for E1ZBJ0 as seed ortholog is 75%.

Group of orthologs #837. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:46 C.variabilis:157

Q75B92              	100.00%		E1ZD08              	100.00%
Bootstrap support for Q75B92 as seed ortholog is 85%.
Bootstrap support for E1ZD08 as seed ortholog is 100%.

Group of orthologs #838. Best score 157 bits
Score difference with first non-orthologous sequence - A.gossypii:157 C.variabilis:157

Q75D95              	100.00%		E1ZQD9              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for E1ZQD9 as seed ortholog is 100%.

Group of orthologs #839. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:81

Q753T9              	100.00%		E1ZQ44              	100.00%
                    	       		E1Z930              	57.62%
Bootstrap support for Q753T9 as seed ortholog is 100%.
Bootstrap support for E1ZQ44 as seed ortholog is 99%.

Group of orthologs #840. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:156

Q75B73              	100.00%		E1Z6H7              	100.00%
Bootstrap support for Q75B73 as seed ortholog is 100%.
Bootstrap support for E1Z6H7 as seed ortholog is 100%.

Group of orthologs #841. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:42 C.variabilis:107

Q75E82              	100.00%		E1Z694              	100.00%
Bootstrap support for Q75E82 as seed ortholog is 92%.
Bootstrap support for E1Z694 as seed ortholog is 99%.

Group of orthologs #842. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:156

Q75EH7              	100.00%		E1ZDR8              	100.00%
Bootstrap support for Q75EH7 as seed ortholog is 100%.
Bootstrap support for E1ZDR8 as seed ortholog is 100%.

Group of orthologs #843. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:156

Q755L1              	100.00%		E1ZLH0              	100.00%
Bootstrap support for Q755L1 as seed ortholog is 100%.
Bootstrap support for E1ZLH0 as seed ortholog is 100%.

Group of orthologs #844. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:42

Q754Y9              	100.00%		E1ZPW1              	100.00%
Bootstrap support for Q754Y9 as seed ortholog is 100%.
Bootstrap support for E1ZPW1 as seed ortholog is 95%.

Group of orthologs #845. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 C.variabilis:156

Q75DC3              	100.00%		E1ZTI2              	100.00%
Bootstrap support for Q75DC3 as seed ortholog is 100%.
Bootstrap support for E1ZTI2 as seed ortholog is 100%.

Group of orthologs #846. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 C.variabilis:155

Q757H7              	100.00%		E1ZGJ5              	100.00%
                    	       		E1ZAD9              	34.07%
Bootstrap support for Q757H7 as seed ortholog is 100%.
Bootstrap support for E1ZGJ5 as seed ortholog is 100%.

Group of orthologs #847. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 C.variabilis:155

Q757R9              	100.00%		E1Z225              	100.00%
Bootstrap support for Q757R9 as seed ortholog is 100%.
Bootstrap support for E1Z225 as seed ortholog is 100%.

Group of orthologs #848. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:155

Q753W6              	100.00%		E1ZD56              	100.00%
Bootstrap support for Q753W6 as seed ortholog is 91%.
Bootstrap support for E1ZD56 as seed ortholog is 100%.

Group of orthologs #849. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 C.variabilis:155

Q75C61              	100.00%		E1ZDY9              	100.00%
Bootstrap support for Q75C61 as seed ortholog is 100%.
Bootstrap support for E1ZDY9 as seed ortholog is 100%.

Group of orthologs #850. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 C.variabilis:155

Q752C6              	100.00%		E1ZQ61              	100.00%
Bootstrap support for Q752C6 as seed ortholog is 100%.
Bootstrap support for E1ZQ61 as seed ortholog is 100%.

Group of orthologs #851. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 C.variabilis:155

Q75F43              	100.00%		E1ZGB4              	100.00%
Bootstrap support for Q75F43 as seed ortholog is 100%.
Bootstrap support for E1ZGB4 as seed ortholog is 100%.

Group of orthologs #852. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 C.variabilis:154

Q754I2              	100.00%		E1Z3T1              	100.00%
Bootstrap support for Q754I2 as seed ortholog is 100%.
Bootstrap support for E1Z3T1 as seed ortholog is 100%.

Group of orthologs #853. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 C.variabilis:107

Q75C73              	100.00%		E1ZPN7              	100.00%
Bootstrap support for Q75C73 as seed ortholog is 100%.
Bootstrap support for E1ZPN7 as seed ortholog is 99%.

Group of orthologs #854. Best score 154 bits
Score difference with first non-orthologous sequence - A.gossypii:154 C.variabilis:154

Q75CV0              	100.00%		E1ZTG7              	100.00%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for E1ZTG7 as seed ortholog is 100%.

Group of orthologs #855. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:37 C.variabilis:153

Q755Y2              	100.00%		E1ZR26              	100.00%
Q759S6              	13.17%		E1ZR25              	29.32%
Bootstrap support for Q755Y2 as seed ortholog is 75%.
Bootstrap support for E1ZR26 as seed ortholog is 100%.

Group of orthologs #856. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 C.variabilis:76

Q75CL8              	100.00%		E1Z5V8              	100.00%
Bootstrap support for Q75CL8 as seed ortholog is 100%.
Bootstrap support for E1Z5V8 as seed ortholog is 97%.

Group of orthologs #857. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:38

Q754D9              	100.00%		E1ZEE8              	100.00%
Bootstrap support for Q754D9 as seed ortholog is 88%.
Bootstrap support for E1ZEE8 as seed ortholog is 81%.

Group of orthologs #858. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:153 C.variabilis:153

Q754W7              	100.00%		E1ZIS6              	100.00%
Bootstrap support for Q754W7 as seed ortholog is 100%.
Bootstrap support for E1ZIS6 as seed ortholog is 100%.

Group of orthologs #859. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:17 C.variabilis:153

Q75EB7              	100.00%		E1ZBW9              	100.00%
Bootstrap support for Q75EB7 as seed ortholog is 90%.
Bootstrap support for E1ZBW9 as seed ortholog is 100%.

Group of orthologs #860. Best score 153 bits
Score difference with first non-orthologous sequence - A.gossypii:37 C.variabilis:153

Q753L6              	100.00%		E1ZLP1              	100.00%
Bootstrap support for Q753L6 as seed ortholog is 72%.
Alternative seed ortholog is Q75E18 (37 bits away from this cluster)
Bootstrap support for E1ZLP1 as seed ortholog is 100%.

Group of orthologs #861. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 C.variabilis:152

Q75CW4              	100.00%		E1ZG55              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for E1ZG55 as seed ortholog is 100%.

Group of orthologs #862. Best score 152 bits
Score difference with first non-orthologous sequence - A.gossypii:152 C.variabilis:152

Q75AA8              	100.00%		E1ZSQ4              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for E1ZSQ4 as seed ortholog is 100%.

Group of orthologs #863. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 C.variabilis:24

Q751A8              	100.00%		E1Z2I2              	100.00%
Bootstrap support for Q751A8 as seed ortholog is 100%.
Bootstrap support for E1Z2I2 as seed ortholog is 21%.
Alternative seed ortholog is E1ZHZ0 (24 bits away from this cluster)

Group of orthologs #864. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:151 C.variabilis:151

Q75AU0              	100.00%		E1ZFH4              	100.00%
Bootstrap support for Q75AU0 as seed ortholog is 100%.
Bootstrap support for E1ZFH4 as seed ortholog is 100%.

Group of orthologs #865. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 C.variabilis:150

Q756E6              	100.00%		E1Z7P0              	100.00%
Bootstrap support for Q756E6 as seed ortholog is 100%.
Bootstrap support for E1Z7P0 as seed ortholog is 100%.

Group of orthologs #866. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 C.variabilis:150

Q759B6              	100.00%		E1ZIC1              	100.00%
Bootstrap support for Q759B6 as seed ortholog is 100%.
Bootstrap support for E1ZIC1 as seed ortholog is 100%.

Group of orthologs #867. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 C.variabilis:150

Q751C8              	100.00%		F2YGM6              	100.00%
Bootstrap support for Q751C8 as seed ortholog is 100%.
Bootstrap support for F2YGM6 as seed ortholog is 100%.

Group of orthologs #868. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:149

Q75C79              	100.00%		E1ZG77              	100.00%
Q753V1              	33.40%		
Q75AS9              	33.40%		
Bootstrap support for Q75C79 as seed ortholog is 100%.
Bootstrap support for E1ZG77 as seed ortholog is 100%.

Group of orthologs #869. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:76

Q74Z38              	100.00%		E1Z2C4              	100.00%
Q75CW3              	11.27%		
Bootstrap support for Q74Z38 as seed ortholog is 100%.
Bootstrap support for E1Z2C4 as seed ortholog is 99%.

Group of orthologs #870. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:149

Q753E7              	100.00%		E1Z8Z0              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for E1Z8Z0 as seed ortholog is 100%.

Group of orthologs #871. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:149

Q75BG9              	100.00%		E1Z6Q7              	100.00%
Bootstrap support for Q75BG9 as seed ortholog is 95%.
Bootstrap support for E1Z6Q7 as seed ortholog is 100%.

Group of orthologs #872. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:149

Q754J9              	100.00%		E1ZDS2              	100.00%
Bootstrap support for Q754J9 as seed ortholog is 100%.
Bootstrap support for E1ZDS2 as seed ortholog is 100%.

Group of orthologs #873. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.variabilis:149

Q75CR9              	100.00%		E1ZCS2              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for E1ZCS2 as seed ortholog is 100%.

Group of orthologs #874. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 C.variabilis:148

Q753R8              	100.00%		E1ZL13              	100.00%
Bootstrap support for Q753R8 as seed ortholog is 100%.
Bootstrap support for E1ZL13 as seed ortholog is 100%.

Group of orthologs #875. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:2 C.variabilis:13

Q751D1              	100.00%		E1ZNU6              	100.00%
Bootstrap support for Q751D1 as seed ortholog is 50%.
Alternative seed ortholog is Q75EW9 (2 bits away from this cluster)
Bootstrap support for E1ZNU6 as seed ortholog is 60%.
Alternative seed ortholog is E1ZMS8 (13 bits away from this cluster)

Group of orthologs #876. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 C.variabilis:100

Q75DD3              	100.00%		E1ZJG3              	100.00%
Bootstrap support for Q75DD3 as seed ortholog is 100%.
Bootstrap support for E1ZJG3 as seed ortholog is 99%.

Group of orthologs #877. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q75F24              	100.00%		E1ZQB1              	100.00%
                    	       		E1ZTC3              	31.60%
Bootstrap support for Q75F24 as seed ortholog is 100%.
Bootstrap support for E1ZQB1 as seed ortholog is 100%.

Group of orthologs #878. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q754G6              	100.00%		E1Z3X9              	100.00%
Bootstrap support for Q754G6 as seed ortholog is 100%.
Bootstrap support for E1Z3X9 as seed ortholog is 100%.

Group of orthologs #879. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q754Y2              	100.00%		E1Z4Q9              	100.00%
Bootstrap support for Q754Y2 as seed ortholog is 100%.
Bootstrap support for E1Z4Q9 as seed ortholog is 100%.

Group of orthologs #880. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q75BQ4              	100.00%		E1Z7Z2              	100.00%
Bootstrap support for Q75BQ4 as seed ortholog is 100%.
Bootstrap support for E1Z7Z2 as seed ortholog is 100%.

Group of orthologs #881. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q75BB7              	100.00%		E1ZEW6              	100.00%
Bootstrap support for Q75BB7 as seed ortholog is 100%.
Bootstrap support for E1ZEW6 as seed ortholog is 100%.

Group of orthologs #882. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q75CG2              	100.00%		E1ZGG1              	100.00%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for E1ZGG1 as seed ortholog is 100%.

Group of orthologs #883. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 C.variabilis:147

Q758C7              	100.00%		E1ZS54              	100.00%
Bootstrap support for Q758C7 as seed ortholog is 100%.
Bootstrap support for E1ZS54 as seed ortholog is 100%.

Group of orthologs #884. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:63 C.variabilis:70

Q75AF2              	100.00%		E1ZB17              	100.00%
                    	       		E1ZG29              	12.82%
Bootstrap support for Q75AF2 as seed ortholog is 98%.
Bootstrap support for E1ZB17 as seed ortholog is 99%.

Group of orthologs #885. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:146

Q750D1              	100.00%		E1Z6D0              	100.00%
Bootstrap support for Q750D1 as seed ortholog is 100%.
Bootstrap support for E1Z6D0 as seed ortholog is 100%.

Group of orthologs #886. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:146

Q754Z5              	100.00%		E1Z708              	100.00%
Bootstrap support for Q754Z5 as seed ortholog is 100%.
Bootstrap support for E1Z708 as seed ortholog is 100%.

Group of orthologs #887. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:47

Q752W1              	100.00%		E1ZD43              	100.00%
Bootstrap support for Q752W1 as seed ortholog is 100%.
Bootstrap support for E1ZD43 as seed ortholog is 90%.

Group of orthologs #888. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:74

Q757U0              	100.00%		E1ZBJ3              	100.00%
Bootstrap support for Q757U0 as seed ortholog is 100%.
Bootstrap support for E1ZBJ3 as seed ortholog is 98%.

Group of orthologs #889. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:146

Q75DY8              	100.00%		E1Z6R5              	100.00%
Bootstrap support for Q75DY8 as seed ortholog is 100%.
Bootstrap support for E1Z6R5 as seed ortholog is 100%.

Group of orthologs #890. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:146

Q75C74              	100.00%		E1ZDK7              	100.00%
Bootstrap support for Q75C74 as seed ortholog is 100%.
Bootstrap support for E1ZDK7 as seed ortholog is 100%.

Group of orthologs #891. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.variabilis:146

Q75DV7              	100.00%		E1ZRM6              	100.00%
Bootstrap support for Q75DV7 as seed ortholog is 100%.
Bootstrap support for E1ZRM6 as seed ortholog is 100%.

Group of orthologs #892. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 C.variabilis:145

Q758P7              	100.00%		E1ZPR3              	100.00%
Q74ZR9              	65.70%		
Q75A68              	15.28%		
Bootstrap support for Q758P7 as seed ortholog is 100%.
Bootstrap support for E1ZPR3 as seed ortholog is 100%.

Group of orthologs #893. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 C.variabilis:145

Q75D36              	100.00%		E1ZJ92              	100.00%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for E1ZJ92 as seed ortholog is 100%.

Group of orthologs #894. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 C.variabilis:145

Q753N0              	100.00%		E1ZUA2              	100.00%
Bootstrap support for Q753N0 as seed ortholog is 100%.
Bootstrap support for E1ZUA2 as seed ortholog is 100%.

Group of orthologs #895. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:144

Q74ZY7              	100.00%		E1Z5K5              	100.00%
Bootstrap support for Q74ZY7 as seed ortholog is 100%.
Bootstrap support for E1Z5K5 as seed ortholog is 100%.

Group of orthologs #896. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:38

Q75CM3              	100.00%		E1Z2B2              	100.00%
Bootstrap support for Q75CM3 as seed ortholog is 100%.
Bootstrap support for E1Z2B2 as seed ortholog is 88%.

Group of orthologs #897. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:144

Q75AV7              	100.00%		E1Z4C7              	100.00%
Bootstrap support for Q75AV7 as seed ortholog is 100%.
Bootstrap support for E1Z4C7 as seed ortholog is 100%.

Group of orthologs #898. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:144

Q75EI5              	100.00%		E1Z6U5              	100.00%
Bootstrap support for Q75EI5 as seed ortholog is 100%.
Bootstrap support for E1Z6U5 as seed ortholog is 100%.

Group of orthologs #899. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:144

Q75CE5              	100.00%		E1ZGQ9              	100.00%
Bootstrap support for Q75CE5 as seed ortholog is 100%.
Bootstrap support for E1ZGQ9 as seed ortholog is 100%.

Group of orthologs #900. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:68

Q75CV6              	100.00%		E1ZL97              	100.00%
Bootstrap support for Q75CV6 as seed ortholog is 100%.
Bootstrap support for E1ZL97 as seed ortholog is 97%.

Group of orthologs #901. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 C.variabilis:53

Q758L8              	100.00%		E1ZRH7              	100.00%
Bootstrap support for Q758L8 as seed ortholog is 100%.
Bootstrap support for E1ZRH7 as seed ortholog is 99%.

Group of orthologs #902. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:15 C.variabilis:144

Q75B13              	100.00%		E1ZSL8              	100.00%
Bootstrap support for Q75B13 as seed ortholog is 72%.
Alternative seed ortholog is Q75BP8 (15 bits away from this cluster)
Bootstrap support for E1ZSL8 as seed ortholog is 100%.

Group of orthologs #903. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:20 C.variabilis:143

Q752H9              	100.00%		E1Z6W6              	100.00%
Bootstrap support for Q752H9 as seed ortholog is 77%.
Bootstrap support for E1Z6W6 as seed ortholog is 100%.

Group of orthologs #904. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:94

Q75A20              	100.00%		E1Z3J1              	100.00%
Bootstrap support for Q75A20 as seed ortholog is 85%.
Bootstrap support for E1Z3J1 as seed ortholog is 99%.

Group of orthologs #905. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:16

Q753M7              	100.00%		E1ZK88              	100.00%
Bootstrap support for Q753M7 as seed ortholog is 100%.
Bootstrap support for E1ZK88 as seed ortholog is 70%.
Alternative seed ortholog is E1ZHZ0 (16 bits away from this cluster)

Group of orthologs #906. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 C.variabilis:143

Q75DM9              	100.00%		E1ZCC1              	100.00%
Bootstrap support for Q75DM9 as seed ortholog is 100%.
Bootstrap support for E1ZCC1 as seed ortholog is 100%.

Group of orthologs #907. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 C.variabilis:99

Q759H8              	100.00%		E1ZJS0              	100.00%
Bootstrap support for Q759H8 as seed ortholog is 100%.
Bootstrap support for E1ZJS0 as seed ortholog is 100%.

Group of orthologs #908. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 C.variabilis:143

Q759W4              	100.00%		E1ZTK1              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for E1ZTK1 as seed ortholog is 100%.

Group of orthologs #909. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 C.variabilis:142

Q74ZF9              	100.00%		E1ZHZ3              	100.00%
Bootstrap support for Q74ZF9 as seed ortholog is 100%.
Bootstrap support for E1ZHZ3 as seed ortholog is 100%.

Group of orthologs #910. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:142 C.variabilis:142

Q755X1              	100.00%		E1ZST2              	100.00%
Bootstrap support for Q755X1 as seed ortholog is 100%.
Bootstrap support for E1ZST2 as seed ortholog is 100%.

Group of orthologs #911. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 C.variabilis:141

Q75CQ6              	100.00%		E1Z9F5              	100.00%
Bootstrap support for Q75CQ6 as seed ortholog is 100%.
Bootstrap support for E1Z9F5 as seed ortholog is 100%.

Group of orthologs #912. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 C.variabilis:141

Q75AB1              	100.00%		E1ZH39              	100.00%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for E1ZH39 as seed ortholog is 100%.

Group of orthologs #913. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 C.variabilis:141

Q757B6              	100.00%		E1ZQC6              	100.00%
Bootstrap support for Q757B6 as seed ortholog is 100%.
Bootstrap support for E1ZQC6 as seed ortholog is 100%.

Group of orthologs #914. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 C.variabilis:140

Q753B1              	100.00%		E1Z753              	100.00%
Bootstrap support for Q753B1 as seed ortholog is 100%.
Bootstrap support for E1Z753 as seed ortholog is 100%.

Group of orthologs #915. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:140

Q75A80              	100.00%		E1ZHU7              	100.00%
Bootstrap support for Q75A80 as seed ortholog is 98%.
Bootstrap support for E1ZHU7 as seed ortholog is 100%.

Group of orthologs #916. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 C.variabilis:140

Q758V1              	100.00%		E1ZS87              	100.00%
Bootstrap support for Q758V1 as seed ortholog is 100%.
Bootstrap support for E1ZS87 as seed ortholog is 100%.

Group of orthologs #917. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 C.variabilis:139

Q753C0              	100.00%		E1ZAP1              	100.00%
Q75DU1              	10.01%		
Bootstrap support for Q753C0 as seed ortholog is 100%.
Bootstrap support for E1ZAP1 as seed ortholog is 100%.

Group of orthologs #918. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:30 C.variabilis:31

Q751G7              	100.00%		E1Z3P5              	100.00%
Bootstrap support for Q751G7 as seed ortholog is 86%.
Bootstrap support for E1Z3P5 as seed ortholog is 87%.

Group of orthologs #919. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 C.variabilis:139

Q750F9              	100.00%		E1Z4K8              	100.00%
Bootstrap support for Q750F9 as seed ortholog is 100%.
Bootstrap support for E1Z4K8 as seed ortholog is 100%.

Group of orthologs #920. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 C.variabilis:139

Q751B7              	100.00%		E1Z8C2              	100.00%
Bootstrap support for Q751B7 as seed ortholog is 100%.
Bootstrap support for E1Z8C2 as seed ortholog is 100%.

Group of orthologs #921. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 C.variabilis:139

Q75F23              	100.00%		E1Z2N4              	100.00%
Bootstrap support for Q75F23 as seed ortholog is 100%.
Bootstrap support for E1Z2N4 as seed ortholog is 100%.

Group of orthologs #922. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 C.variabilis:139

Q74ZM0              	100.00%		E1ZTH0              	100.00%
Bootstrap support for Q74ZM0 as seed ortholog is 100%.
Bootstrap support for E1ZTH0 as seed ortholog is 100%.

Group of orthologs #923. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 C.variabilis:138

Q75D55              	100.00%		E1Z679              	100.00%
                    	       		E1ZPL2              	19.85%
Bootstrap support for Q75D55 as seed ortholog is 100%.
Bootstrap support for E1Z679 as seed ortholog is 100%.

Group of orthologs #924. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 C.variabilis:138

Q751L1              	100.00%		E1Z5P0              	100.00%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for E1Z5P0 as seed ortholog is 100%.

Group of orthologs #925. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 C.variabilis:138

Q75A75              	100.00%		E1ZGT4              	100.00%
Bootstrap support for Q75A75 as seed ortholog is 100%.
Bootstrap support for E1ZGT4 as seed ortholog is 100%.

Group of orthologs #926. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 C.variabilis:138

Q752Z9              	100.00%		E1ZQM0              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for E1ZQM0 as seed ortholog is 100%.

Group of orthologs #927. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 C.variabilis:137

Q74ZQ1              	100.00%		E1ZDF2              	100.00%
Bootstrap support for Q74ZQ1 as seed ortholog is 100%.
Bootstrap support for E1ZDF2 as seed ortholog is 100%.

Group of orthologs #928. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 C.variabilis:137

Q75BM3              	100.00%		E1Z593              	100.00%
Bootstrap support for Q75BM3 as seed ortholog is 100%.
Bootstrap support for E1Z593 as seed ortholog is 100%.

Group of orthologs #929. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 C.variabilis:137

Q74Z71              	100.00%		E1ZME1              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for E1ZME1 as seed ortholog is 100%.

Group of orthologs #930. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 C.variabilis:137

Q75AT6              	100.00%		E1ZPY6              	100.00%
Bootstrap support for Q75AT6 as seed ortholog is 100%.
Bootstrap support for E1ZPY6 as seed ortholog is 100%.

Group of orthologs #931. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 C.variabilis:136

Q752Z1              	100.00%		E1Z941              	100.00%
                    	       		E1Z2P5              	28.43%
Bootstrap support for Q752Z1 as seed ortholog is 100%.
Bootstrap support for E1Z941 as seed ortholog is 100%.

Group of orthologs #932. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 C.variabilis:136

Q75DU3              	100.00%		E1Z2V3              	100.00%
Bootstrap support for Q75DU3 as seed ortholog is 100%.
Bootstrap support for E1Z2V3 as seed ortholog is 100%.

Group of orthologs #933. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:136

Q757L0              	100.00%		E1ZBQ5              	100.00%
Bootstrap support for Q757L0 as seed ortholog is 99%.
Bootstrap support for E1ZBQ5 as seed ortholog is 100%.

Group of orthologs #934. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 C.variabilis:136

Q758Z5              	100.00%		E1ZH61              	100.00%
Bootstrap support for Q758Z5 as seed ortholog is 100%.
Bootstrap support for E1ZH61 as seed ortholog is 100%.

Group of orthologs #935. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:40

Q75AK9              	100.00%		E1ZNU5              	100.00%
Bootstrap support for Q75AK9 as seed ortholog is 97%.
Bootstrap support for E1ZNU5 as seed ortholog is 83%.

Group of orthologs #936. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 C.variabilis:136

Q75CA4              	100.00%		E1ZN08              	100.00%
Bootstrap support for Q75CA4 as seed ortholog is 100%.
Bootstrap support for E1ZN08 as seed ortholog is 100%.

Group of orthologs #937. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:81

Q750Q2              	100.00%		E1Z528              	100.00%
Bootstrap support for Q750Q2 as seed ortholog is 100%.
Bootstrap support for E1Z528 as seed ortholog is 99%.

Group of orthologs #938. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:52

Q75A60              	100.00%		E1Z4Q6              	100.00%
Bootstrap support for Q75A60 as seed ortholog is 99%.
Bootstrap support for E1Z4Q6 as seed ortholog is 92%.

Group of orthologs #939. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:135

Q74ZI0              	100.00%		E1ZJ84              	100.00%
Bootstrap support for Q74ZI0 as seed ortholog is 100%.
Bootstrap support for E1ZJ84 as seed ortholog is 100%.

Group of orthologs #940. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:135

Q751S0              	100.00%		E1ZI40              	100.00%
Bootstrap support for Q751S0 as seed ortholog is 100%.
Bootstrap support for E1ZI40 as seed ortholog is 100%.

Group of orthologs #941. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:135

Q75A25              	100.00%		E1ZDU8              	100.00%
Bootstrap support for Q75A25 as seed ortholog is 100%.
Bootstrap support for E1ZDU8 as seed ortholog is 100%.

Group of orthologs #942. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:135

Q75EG3              	100.00%		E1ZGH3              	100.00%
Bootstrap support for Q75EG3 as seed ortholog is 100%.
Bootstrap support for E1ZGH3 as seed ortholog is 100%.

Group of orthologs #943. Best score 135 bits
Score difference with first non-orthologous sequence - A.gossypii:135 C.variabilis:135

Q75ER0              	100.00%		E1ZIX2              	100.00%
Bootstrap support for Q75ER0 as seed ortholog is 100%.
Bootstrap support for E1ZIX2 as seed ortholog is 100%.

Group of orthologs #944. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 C.variabilis:134

Q758S7              	100.00%		E1ZG05              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for E1ZG05 as seed ortholog is 100%.

Group of orthologs #945. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 C.variabilis:134

Q75AT3              	100.00%		E1ZHP8              	100.00%
Bootstrap support for Q75AT3 as seed ortholog is 100%.
Bootstrap support for E1ZHP8 as seed ortholog is 100%.

Group of orthologs #946. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 C.variabilis:134

Q755P0              	100.00%		E1ZPM6              	100.00%
Bootstrap support for Q755P0 as seed ortholog is 100%.
Bootstrap support for E1ZPM6 as seed ortholog is 100%.

Group of orthologs #947. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 C.variabilis:134

Q756D6              	100.00%		E1ZU04              	100.00%
Bootstrap support for Q756D6 as seed ortholog is 100%.
Bootstrap support for E1ZU04 as seed ortholog is 100%.

Group of orthologs #948. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 C.variabilis:134

Q75CY9              	100.00%		E1ZSA6              	100.00%
Bootstrap support for Q75CY9 as seed ortholog is 100%.
Bootstrap support for E1ZSA6 as seed ortholog is 100%.

Group of orthologs #949. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:75

Q74ZU8              	100.00%		E1Z607              	100.00%
Bootstrap support for Q74ZU8 as seed ortholog is 100%.
Bootstrap support for E1Z607 as seed ortholog is 94%.

Group of orthologs #950. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:133

Q757L5              	100.00%		E1Z578              	100.00%
Bootstrap support for Q757L5 as seed ortholog is 100%.
Bootstrap support for E1Z578 as seed ortholog is 100%.

Group of orthologs #951. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:133

Q75B05              	100.00%		E1ZC65              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 100%.
Bootstrap support for E1ZC65 as seed ortholog is 100%.

Group of orthologs #952. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:133

Q756T5              	100.00%		E1ZGF5              	100.00%
Bootstrap support for Q756T5 as seed ortholog is 100%.
Bootstrap support for E1ZGF5 as seed ortholog is 100%.

Group of orthologs #953. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:133

Q751B5              	100.00%		E1ZSD8              	100.00%
Bootstrap support for Q751B5 as seed ortholog is 100%.
Bootstrap support for E1ZSD8 as seed ortholog is 100%.

Group of orthologs #954. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:133

Q756L5              	100.00%		E1ZQ25              	100.00%
Bootstrap support for Q756L5 as seed ortholog is 100%.
Bootstrap support for E1ZQ25 as seed ortholog is 100%.

Group of orthologs #955. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.variabilis:133

Q75DA3              	100.00%		E1ZTK2              	100.00%
Bootstrap support for Q75DA3 as seed ortholog is 100%.
Bootstrap support for E1ZTK2 as seed ortholog is 100%.

Group of orthologs #956. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 C.variabilis:46

Q75AX5              	100.00%		E1Z303              	100.00%
                    	       		E1ZI81              	8.32%
                    	       		E1ZD28              	8.21%
                    	       		E1ZAQ9              	7.53%
Bootstrap support for Q75AX5 as seed ortholog is 100%.
Bootstrap support for E1Z303 as seed ortholog is 92%.

Group of orthologs #957. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 C.variabilis:87

Q75AL4              	100.00%		E1ZSU6              	100.00%
Q752Y4              	13.67%		
Bootstrap support for Q75AL4 as seed ortholog is 100%.
Bootstrap support for E1ZSU6 as seed ortholog is 99%.

Group of orthologs #958. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 C.variabilis:132

Q752C7              	100.00%		E1Z205              	100.00%
Bootstrap support for Q752C7 as seed ortholog is 100%.
Bootstrap support for E1Z205 as seed ortholog is 100%.

Group of orthologs #959. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 C.variabilis:132

Q75DL6              	100.00%		E1Z9Q6              	100.00%
Bootstrap support for Q75DL6 as seed ortholog is 100%.
Bootstrap support for E1Z9Q6 as seed ortholog is 100%.

Group of orthologs #960. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:131

Q753X8              	100.00%		E1ZAU8              	100.00%
                    	       		E1ZB33              	45.36%
Bootstrap support for Q753X8 as seed ortholog is 100%.
Bootstrap support for E1ZAU8 as seed ortholog is 100%.

Group of orthologs #961. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:131

Q757Z5              	100.00%		E1ZGW5              	100.00%
Q75AM0              	7.64%		
Bootstrap support for Q757Z5 as seed ortholog is 100%.
Bootstrap support for E1ZGW5 as seed ortholog is 100%.

Group of orthologs #962. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:11

Q75AN3              	100.00%		E1ZME7              	100.00%
Q75AA3              	10.24%		
Bootstrap support for Q75AN3 as seed ortholog is 100%.
Bootstrap support for E1ZME7 as seed ortholog is 70%.
Alternative seed ortholog is E1ZDL6 (11 bits away from this cluster)

Group of orthologs #963. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:131

Q75EP2              	100.00%		E1Z6L3              	100.00%
Bootstrap support for Q75EP2 as seed ortholog is 100%.
Bootstrap support for E1Z6L3 as seed ortholog is 100%.

Group of orthologs #964. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:131

Q75E90              	100.00%		E1ZDE6              	100.00%
Bootstrap support for Q75E90 as seed ortholog is 100%.
Bootstrap support for E1ZDE6 as seed ortholog is 100%.

Group of orthologs #965. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:131

Q75E00              	100.00%		E1ZGL7              	100.00%
Bootstrap support for Q75E00 as seed ortholog is 100%.
Bootstrap support for E1ZGL7 as seed ortholog is 100%.

Group of orthologs #966. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 C.variabilis:67

Q75C81              	100.00%		E1ZNZ9              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 100%.
Bootstrap support for E1ZNZ9 as seed ortholog is 99%.

Group of orthologs #967. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:7 C.variabilis:26

Q75B41              	100.00%		E1Z363              	100.00%
                    	       		E1ZJ71              	5.36%
Bootstrap support for Q75B41 as seed ortholog is 57%.
Alternative seed ortholog is Q754C4 (7 bits away from this cluster)
Bootstrap support for E1Z363 as seed ortholog is 77%.

Group of orthologs #968. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 C.variabilis:78

Q75AA1              	100.00%		E1ZA84              	100.00%
Bootstrap support for Q75AA1 as seed ortholog is 100%.
Bootstrap support for E1ZA84 as seed ortholog is 100%.

Group of orthologs #969. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 C.variabilis:130

Q756Y7              	100.00%		E1ZIK4              	100.00%
Bootstrap support for Q756Y7 as seed ortholog is 100%.
Bootstrap support for E1ZIK4 as seed ortholog is 100%.

Group of orthologs #970. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:129

Q751T7              	100.00%		E1ZL94              	100.00%
                    	       		E1ZHF8              	24.45%
                    	       		E1ZHX2              	21.97%
Bootstrap support for Q751T7 as seed ortholog is 100%.
Bootstrap support for E1ZL94 as seed ortholog is 100%.

Group of orthologs #971. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:56

Q751J1              	100.00%		E1ZEC5              	100.00%
                    	       		E1Z6A6              	23.22%
Bootstrap support for Q751J1 as seed ortholog is 100%.
Bootstrap support for E1ZEC5 as seed ortholog is 91%.

Group of orthologs #972. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:20 C.variabilis:64

Q754C3              	100.00%		E1Z5E7              	100.00%
Bootstrap support for Q754C3 as seed ortholog is 71%.
Alternative seed ortholog is Q75A82 (20 bits away from this cluster)
Bootstrap support for E1Z5E7 as seed ortholog is 96%.

Group of orthologs #973. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:129

Q75BA9              	100.00%		E1Z434              	100.00%
Bootstrap support for Q75BA9 as seed ortholog is 100%.
Bootstrap support for E1Z434 as seed ortholog is 100%.

Group of orthologs #974. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:129

Q75DK2              	100.00%		E1Z610              	100.00%
Bootstrap support for Q75DK2 as seed ortholog is 100%.
Bootstrap support for E1Z610 as seed ortholog is 100%.

Group of orthologs #975. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:129

Q759W1              	100.00%		E1ZC83              	100.00%
Bootstrap support for Q759W1 as seed ortholog is 100%.
Bootstrap support for E1ZC83 as seed ortholog is 100%.

Group of orthologs #976. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.variabilis:129

Q75D68              	100.00%		E1ZKQ8              	100.00%
Bootstrap support for Q75D68 as seed ortholog is 100%.
Bootstrap support for E1ZKQ8 as seed ortholog is 100%.

Group of orthologs #977. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 C.variabilis:128

Q755V0              	100.00%		E1ZEG4              	100.00%
                    	       		E1ZEG5              	52.29%
Bootstrap support for Q755V0 as seed ortholog is 100%.
Bootstrap support for E1ZEG4 as seed ortholog is 100%.

Group of orthologs #978. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 C.variabilis:128

Q753B3              	100.00%		E1Z2L8              	100.00%
Bootstrap support for Q753B3 as seed ortholog is 100%.
Bootstrap support for E1Z2L8 as seed ortholog is 100%.

Group of orthologs #979. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 C.variabilis:128

Q753F4              	100.00%		E1ZA99              	100.00%
Bootstrap support for Q753F4 as seed ortholog is 100%.
Bootstrap support for E1ZA99 as seed ortholog is 100%.

Group of orthologs #980. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 C.variabilis:128

Q752K8              	100.00%		E1ZDW0              	100.00%
Bootstrap support for Q752K8 as seed ortholog is 100%.
Bootstrap support for E1ZDW0 as seed ortholog is 100%.

Group of orthologs #981. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 C.variabilis:128

Q75AA5              	100.00%		E1ZFR7              	100.00%
Bootstrap support for Q75AA5 as seed ortholog is 100%.
Bootstrap support for E1ZFR7 as seed ortholog is 100%.

Group of orthologs #982. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 C.variabilis:128

Q759W8              	100.00%		E1ZQ01              	100.00%
Bootstrap support for Q759W8 as seed ortholog is 100%.
Bootstrap support for E1ZQ01 as seed ortholog is 100%.

Group of orthologs #983. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:29 C.variabilis:46

Q74Z23              	100.00%		E1ZE35              	100.00%
Bootstrap support for Q74Z23 as seed ortholog is 76%.
Bootstrap support for E1ZE35 as seed ortholog is 87%.

Group of orthologs #984. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:127

Q751I7              	100.00%		E1ZFL5              	100.00%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for E1ZFL5 as seed ortholog is 100%.

Group of orthologs #985. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:127

Q75BS7              	100.00%		E1ZAL6              	100.00%
Bootstrap support for Q75BS7 as seed ortholog is 100%.
Bootstrap support for E1ZAL6 as seed ortholog is 100%.

Group of orthologs #986. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:127

Q74Z63              	100.00%		E1ZKW8              	100.00%
Bootstrap support for Q74Z63 as seed ortholog is 100%.
Bootstrap support for E1ZKW8 as seed ortholog is 100%.

Group of orthologs #987. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:127

Q75EG8              	100.00%		E1ZB48              	100.00%
Bootstrap support for Q75EG8 as seed ortholog is 100%.
Bootstrap support for E1ZB48 as seed ortholog is 100%.

Group of orthologs #988. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 C.variabilis:71

Q75DS6              	100.00%		E1ZTG2              	100.00%
Bootstrap support for Q75DS6 as seed ortholog is 100%.
Bootstrap support for E1ZTG2 as seed ortholog is 96%.

Group of orthologs #989. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:126

Q750A2              	100.00%		E1Z947              	100.00%
Bootstrap support for Q750A2 as seed ortholog is 100%.
Bootstrap support for E1Z947 as seed ortholog is 100%.

Group of orthologs #990. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:126

Q75CJ6              	100.00%		E1Z7C4              	100.00%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for E1Z7C4 as seed ortholog is 100%.

Group of orthologs #991. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:126

Q751W0              	100.00%		E1ZGH6              	100.00%
Bootstrap support for Q751W0 as seed ortholog is 100%.
Bootstrap support for E1ZGH6 as seed ortholog is 100%.

Group of orthologs #992. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:126

Q750C7              	100.00%		E1ZP58              	100.00%
Bootstrap support for Q750C7 as seed ortholog is 100%.
Bootstrap support for E1ZP58 as seed ortholog is 100%.

Group of orthologs #993. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:82

Q75B80              	100.00%		E1ZJ27              	100.00%
Bootstrap support for Q75B80 as seed ortholog is 100%.
Bootstrap support for E1ZJ27 as seed ortholog is 99%.

Group of orthologs #994. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 C.variabilis:126

Q75DK9              	100.00%		E1ZM86              	100.00%
Bootstrap support for Q75DK9 as seed ortholog is 100%.
Bootstrap support for E1ZM86 as seed ortholog is 100%.

Group of orthologs #995. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:126

Q75BU2              	100.00%		E1ZQT2              	100.00%
Bootstrap support for Q75BU2 as seed ortholog is 92%.
Bootstrap support for E1ZQT2 as seed ortholog is 100%.

Group of orthologs #996. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:16 C.variabilis:10

Q755C5              	100.00%		E1ZJ75              	100.00%
                    	       		E1ZJJ0              	9.12%
Bootstrap support for Q755C5 as seed ortholog is 64%.
Alternative seed ortholog is Q75F95 (16 bits away from this cluster)
Bootstrap support for E1ZJ75 as seed ortholog is 56%.
Alternative seed ortholog is E1Z2R1 (10 bits away from this cluster)

Group of orthologs #997. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 C.variabilis:125

Q754S7              	100.00%		E1ZMY6              	100.00%
Bootstrap support for Q754S7 as seed ortholog is 100%.
Bootstrap support for E1ZMY6 as seed ortholog is 100%.

Group of orthologs #998. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.variabilis:124

Q755H7              	100.00%		E1Z608              	100.00%
Bootstrap support for Q755H7 as seed ortholog is 100%.
Bootstrap support for E1Z608 as seed ortholog is 100%.

Group of orthologs #999. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.variabilis:124

Q752S4              	100.00%		E1ZGV8              	100.00%
Bootstrap support for Q752S4 as seed ortholog is 100%.
Bootstrap support for E1ZGV8 as seed ortholog is 100%.

Group of orthologs #1000. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.variabilis:124

Q754Q8              	100.00%		E1ZGU1              	100.00%
Bootstrap support for Q754Q8 as seed ortholog is 100%.
Bootstrap support for E1ZGU1 as seed ortholog is 100%.

Group of orthologs #1001. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.variabilis:124

Q75DA1              	100.00%		E1ZA55              	100.00%
Bootstrap support for Q75DA1 as seed ortholog is 100%.
Bootstrap support for E1ZA55 as seed ortholog is 100%.

Group of orthologs #1002. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:124

Q755N5              	100.00%		E1ZRT1              	100.00%
Bootstrap support for Q755N5 as seed ortholog is 93%.
Bootstrap support for E1ZRT1 as seed ortholog is 100%.

Group of orthologs #1003. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.variabilis:124

Q75E32              	100.00%		E1ZKP2              	100.00%
Bootstrap support for Q75E32 as seed ortholog is 100%.
Bootstrap support for E1ZKP2 as seed ortholog is 100%.

Group of orthologs #1004. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.variabilis:124

Q75BN3              	100.00%		E1ZR20              	100.00%
Bootstrap support for Q75BN3 as seed ortholog is 100%.
Bootstrap support for E1ZR20 as seed ortholog is 100%.

Group of orthologs #1005. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 C.variabilis:122

Q755J2              	100.00%		E1ZQH4              	100.00%
Bootstrap support for Q755J2 as seed ortholog is 100%.
Bootstrap support for E1ZQH4 as seed ortholog is 100%.

Group of orthologs #1006. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 C.variabilis:122

Q75AJ0              	100.00%		E1ZRR3              	100.00%
Bootstrap support for Q75AJ0 as seed ortholog is 100%.
Bootstrap support for E1ZRR3 as seed ortholog is 100%.

Group of orthologs #1007. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 C.variabilis:121

Q75B71              	100.00%		E1Z6Q5              	100.00%
Bootstrap support for Q75B71 as seed ortholog is 100%.
Bootstrap support for E1Z6Q5 as seed ortholog is 100%.

Group of orthologs #1008. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 C.variabilis:121

Q752Z2              	100.00%		E1ZE78              	100.00%
Bootstrap support for Q752Z2 as seed ortholog is 100%.
Bootstrap support for E1ZE78 as seed ortholog is 100%.

Group of orthologs #1009. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 C.variabilis:121

Q75BZ9              	100.00%		E1ZAE0              	100.00%
Bootstrap support for Q75BZ9 as seed ortholog is 100%.
Bootstrap support for E1ZAE0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 C.variabilis:121

Q753Z0              	100.00%		E1ZIT7              	100.00%
Bootstrap support for Q753Z0 as seed ortholog is 100%.
Bootstrap support for E1ZIT7 as seed ortholog is 100%.

Group of orthologs #1011. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 C.variabilis:121

Q756E2              	100.00%		E1ZQX2              	100.00%
Bootstrap support for Q756E2 as seed ortholog is 100%.
Bootstrap support for E1ZQX2 as seed ortholog is 100%.

Group of orthologs #1012. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:120

Q756E7              	100.00%		E1Z6L1              	100.00%
Bootstrap support for Q756E7 as seed ortholog is 100%.
Bootstrap support for E1Z6L1 as seed ortholog is 100%.

Group of orthologs #1013. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:120

Q757D7              	100.00%		E1Z755              	100.00%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for E1Z755 as seed ortholog is 100%.

Group of orthologs #1014. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:120

Q75A97              	100.00%		E1Z719              	100.00%
Bootstrap support for Q75A97 as seed ortholog is 100%.
Bootstrap support for E1Z719 as seed ortholog is 100%.

Group of orthologs #1015. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:120

Q75DW5              	100.00%		E1Z482              	100.00%
Bootstrap support for Q75DW5 as seed ortholog is 100%.
Bootstrap support for E1Z482 as seed ortholog is 100%.

Group of orthologs #1016. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 C.variabilis:120

Q758N4              	100.00%		E1ZA67              	100.00%
Bootstrap support for Q758N4 as seed ortholog is 100%.
Bootstrap support for E1ZA67 as seed ortholog is 100%.

Group of orthologs #1017. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:62

Q752A4              	100.00%		E1ZNL8              	100.00%
                    	       		E1Z268              	12.34%
Bootstrap support for Q752A4 as seed ortholog is 100%.
Bootstrap support for E1ZNL8 as seed ortholog is 73%.
Alternative seed ortholog is E1Z2X9 (62 bits away from this cluster)

Group of orthologs #1018. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:13 C.variabilis:119

Q74ZJ6              	100.00%		E1Z792              	100.00%
Bootstrap support for Q74ZJ6 as seed ortholog is 56%.
Alternative seed ortholog is Q756C5 (13 bits away from this cluster)
Bootstrap support for E1Z792 as seed ortholog is 100%.

Group of orthologs #1019. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:119

Q755F3              	100.00%		E1ZIJ2              	100.00%
Bootstrap support for Q755F3 as seed ortholog is 100%.
Bootstrap support for E1ZIJ2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:119

Q75C52              	100.00%		E1ZGA3              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for E1ZGA3 as seed ortholog is 100%.

Group of orthologs #1021. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:119

Q75EQ5              	100.00%		E1ZE96              	100.00%
Bootstrap support for Q75EQ5 as seed ortholog is 100%.
Bootstrap support for E1ZE96 as seed ortholog is 100%.

Group of orthologs #1022. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:119

Q759B9              	100.00%		E1ZK51              	100.00%
Bootstrap support for Q759B9 as seed ortholog is 100%.
Bootstrap support for E1ZK51 as seed ortholog is 100%.

Group of orthologs #1023. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 C.variabilis:119

Q756C6              	100.00%		E1ZS74              	100.00%
Bootstrap support for Q756C6 as seed ortholog is 100%.
Bootstrap support for E1ZS74 as seed ortholog is 100%.

Group of orthologs #1024. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:74

Q75DI4              	100.00%		E1ZBR0              	100.00%
                    	       		E1ZBQ9              	20.81%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for E1ZBR0 as seed ortholog is 100%.

Group of orthologs #1025. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q756W6              	100.00%		E1ZLS7              	100.00%
                    	       		E1Z675              	11.11%
Bootstrap support for Q756W6 as seed ortholog is 100%.
Bootstrap support for E1ZLS7 as seed ortholog is 100%.

Group of orthologs #1026. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q756R3              	100.00%		E1Z933              	100.00%
Bootstrap support for Q756R3 as seed ortholog is 100%.
Bootstrap support for E1Z933 as seed ortholog is 100%.

Group of orthologs #1027. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q75DG9              	100.00%		E1Z597              	100.00%
Bootstrap support for Q75DG9 as seed ortholog is 100%.
Bootstrap support for E1Z597 as seed ortholog is 100%.

Group of orthologs #1028. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q75AS8              	100.00%		E1Z9S6              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for E1Z9S6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q753Z6              	100.00%		E1ZIC5              	100.00%
Bootstrap support for Q753Z6 as seed ortholog is 100%.
Bootstrap support for E1ZIC5 as seed ortholog is 100%.

Group of orthologs #1030. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q759W3              	100.00%		E1ZK41              	100.00%
Bootstrap support for Q759W3 as seed ortholog is 100%.
Bootstrap support for E1ZK41 as seed ortholog is 100%.

Group of orthologs #1031. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 C.variabilis:118

Q75E17              	100.00%		E1ZMN5              	100.00%
Bootstrap support for Q75E17 as seed ortholog is 100%.
Bootstrap support for E1ZMN5 as seed ortholog is 100%.

Group of orthologs #1032. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:63

Q754W2              	100.00%		E1ZIJ7              	100.00%
                    	       		E1ZGJ4              	9.99%
                    	       		E1ZG28              	6.95%
Bootstrap support for Q754W2 as seed ortholog is 91%.
Bootstrap support for E1ZIJ7 as seed ortholog is 89%.

Group of orthologs #1033. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 C.variabilis:117

Q752U6              	100.00%		E1Z5D1              	100.00%
Bootstrap support for Q752U6 as seed ortholog is 100%.
Bootstrap support for E1Z5D1 as seed ortholog is 100%.

Group of orthologs #1034. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 C.variabilis:117

Q753P1              	100.00%		E1Z693              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for E1Z693 as seed ortholog is 100%.

Group of orthologs #1035. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 C.variabilis:117

Q758M6              	100.00%		E1ZGK3              	100.00%
Bootstrap support for Q758M6 as seed ortholog is 100%.
Bootstrap support for E1ZGK3 as seed ortholog is 100%.

Group of orthologs #1036. Best score 117 bits
Score difference with first non-orthologous sequence - A.gossypii:117 C.variabilis:117

Q755S2              	100.00%		E1ZJB3              	100.00%
Bootstrap support for Q755S2 as seed ortholog is 100%.
Bootstrap support for E1ZJB3 as seed ortholog is 100%.

Group of orthologs #1037. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 C.variabilis:30

Q754F0              	100.00%		E1ZFP2              	100.00%
Bootstrap support for Q754F0 as seed ortholog is 100%.
Bootstrap support for E1ZFP2 as seed ortholog is 87%.

Group of orthologs #1038. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 C.variabilis:116

Q75DN6              	100.00%		E1Z8Y0              	100.00%
Bootstrap support for Q75DN6 as seed ortholog is 100%.
Bootstrap support for E1Z8Y0 as seed ortholog is 100%.

Group of orthologs #1039. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 C.variabilis:116

Q75EL5              	100.00%		E1ZBW1              	100.00%
Bootstrap support for Q75EL5 as seed ortholog is 100%.
Bootstrap support for E1ZBW1 as seed ortholog is 100%.

Group of orthologs #1040. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 C.variabilis:116

Q752L4              	100.00%		E1ZQ46              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for E1ZQ46 as seed ortholog is 100%.

Group of orthologs #1041. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 C.variabilis:116

Q75C33              	100.00%		E1ZLZ5              	100.00%
Bootstrap support for Q75C33 as seed ortholog is 100%.
Bootstrap support for E1ZLZ5 as seed ortholog is 100%.

Group of orthologs #1042. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 C.variabilis:115

Q75AC0              	100.00%		E1ZIJ1              	100.00%
Bootstrap support for Q75AC0 as seed ortholog is 100%.
Bootstrap support for E1ZIJ1 as seed ortholog is 100%.

Group of orthologs #1043. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 C.variabilis:114

Q750X7              	100.00%		E1ZLN6              	100.00%
                    	       		E1ZMW6              	6.21%
Bootstrap support for Q750X7 as seed ortholog is 100%.
Bootstrap support for E1ZLN6 as seed ortholog is 100%.

Group of orthologs #1044. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 C.variabilis:114

Q757B8              	100.00%		E1Z4Z1              	100.00%
Bootstrap support for Q757B8 as seed ortholog is 100%.
Bootstrap support for E1Z4Z1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 C.variabilis:114

Q750K3              	100.00%		E1ZCG1              	100.00%
Bootstrap support for Q750K3 as seed ortholog is 100%.
Bootstrap support for E1ZCG1 as seed ortholog is 100%.

Group of orthologs #1046. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 C.variabilis:114

Q756A4              	100.00%		E1ZRW3              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for E1ZRW3 as seed ortholog is 100%.

Group of orthologs #1047. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q755R1              	100.00%		E1ZFC9              	100.00%
D8FGF0              	100.00%		
Bootstrap support for Q755R1 as seed ortholog is 100%.
Bootstrap support for D8FGF0 as seed ortholog is 100%.
Bootstrap support for E1ZFC9 as seed ortholog is 100%.

Group of orthologs #1048. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q74Z43              	100.00%		E1ZHW0              	100.00%
                    	       		E1ZHC4              	8.84%
Bootstrap support for Q74Z43 as seed ortholog is 100%.
Bootstrap support for E1ZHW0 as seed ortholog is 100%.

Group of orthologs #1049. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q755E0              	100.00%		E1Z372              	100.00%
Bootstrap support for Q755E0 as seed ortholog is 100%.
Bootstrap support for E1Z372 as seed ortholog is 100%.

Group of orthologs #1050. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:69

Q750U6              	100.00%		E1Z9I6              	100.00%
Bootstrap support for Q750U6 as seed ortholog is 100%.
Bootstrap support for E1Z9I6 as seed ortholog is 100%.

Group of orthologs #1051. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q752B0              	100.00%		E1Z9T2              	100.00%
Bootstrap support for Q752B0 as seed ortholog is 100%.
Bootstrap support for E1Z9T2 as seed ortholog is 100%.

Group of orthologs #1052. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q755X8              	100.00%		E1Z768              	100.00%
Bootstrap support for Q755X8 as seed ortholog is 100%.
Bootstrap support for E1Z768 as seed ortholog is 100%.

Group of orthologs #1053. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:2 C.variabilis:37

Q75CF2              	100.00%		E1Z2C3              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 54%.
Alternative seed ortholog is Q752A0 (2 bits away from this cluster)
Bootstrap support for E1Z2C3 as seed ortholog is 85%.

Group of orthologs #1054. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q753N1              	100.00%		E1ZK67              	100.00%
Bootstrap support for Q753N1 as seed ortholog is 100%.
Bootstrap support for E1ZK67 as seed ortholog is 100%.

Group of orthologs #1055. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q75A84              	100.00%		E1ZLY0              	100.00%
Bootstrap support for Q75A84 as seed ortholog is 100%.
Bootstrap support for E1ZLY0 as seed ortholog is 100%.

Group of orthologs #1056. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:112 C.variabilis:112

Q75EA5              	100.00%		E1ZME8              	100.00%
Bootstrap support for Q75EA5 as seed ortholog is 100%.
Bootstrap support for E1ZME8 as seed ortholog is 100%.

Group of orthologs #1057. Best score 112 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:112

Q75CH9              	100.00%		E1ZRE9              	100.00%
Bootstrap support for Q75CH9 as seed ortholog is 91%.
Bootstrap support for E1ZRE9 as seed ortholog is 100%.

Group of orthologs #1058. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:25 C.variabilis:12

Q757M1              	100.00%		E1ZCI0              	100.00%
                    	       		E1ZNP3              	8.81%
Bootstrap support for Q757M1 as seed ortholog is 74%.
Alternative seed ortholog is Q75BE1 (25 bits away from this cluster)
Bootstrap support for E1ZCI0 as seed ortholog is 37%.
Alternative seed ortholog is E1ZS43 (12 bits away from this cluster)

Group of orthologs #1059. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:111

Q75AK5              	100.00%		E1Z8C6              	100.00%
Bootstrap support for Q75AK5 as seed ortholog is 100%.
Bootstrap support for E1Z8C6 as seed ortholog is 100%.

Group of orthologs #1060. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:56

Q75C01              	100.00%		E1Z993              	100.00%
Bootstrap support for Q75C01 as seed ortholog is 100%.
Bootstrap support for E1Z993 as seed ortholog is 98%.

Group of orthologs #1061. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:111

Q75C67              	100.00%		E1ZE43              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 100%.
Bootstrap support for E1ZE43 as seed ortholog is 100%.

Group of orthologs #1062. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:111

Q752G1              	100.00%		E1ZQY6              	100.00%
Bootstrap support for Q752G1 as seed ortholog is 100%.
Bootstrap support for E1ZQY6 as seed ortholog is 100%.

Group of orthologs #1063. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:111

Q753P0              	100.00%		E1ZR35              	100.00%
Bootstrap support for Q753P0 as seed ortholog is 100%.
Bootstrap support for E1ZR35 as seed ortholog is 100%.

Group of orthologs #1064. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:111

Q75AW6              	100.00%		E1ZKR5              	100.00%
Bootstrap support for Q75AW6 as seed ortholog is 100%.
Bootstrap support for E1ZKR5 as seed ortholog is 100%.

Group of orthologs #1065. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 C.variabilis:54

Q759T0              	100.00%		E1ZQV7              	100.00%
Bootstrap support for Q759T0 as seed ortholog is 100%.
Bootstrap support for E1ZQV7 as seed ortholog is 99%.

Group of orthologs #1066. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 C.variabilis:110

Q74Z98              	100.00%		E1Z9U6              	100.00%
Q757V3              	16.74%		
Bootstrap support for Q74Z98 as seed ortholog is 100%.
Bootstrap support for E1Z9U6 as seed ortholog is 100%.

Group of orthologs #1067. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 C.variabilis:110

Q753N3              	100.00%		E1ZJ06              	100.00%
Q751V9              	20.11%		
Bootstrap support for Q753N3 as seed ortholog is 100%.
Bootstrap support for E1ZJ06 as seed ortholog is 100%.

Group of orthologs #1068. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 C.variabilis:110

Q75DH6              	100.00%		E1ZH43              	100.00%
Bootstrap support for Q75DH6 as seed ortholog is 100%.
Bootstrap support for E1ZH43 as seed ortholog is 100%.

Group of orthologs #1069. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:109

Q754C5              	100.00%		E1ZAY3              	100.00%
Q758U4              	20.83%		
Bootstrap support for Q754C5 as seed ortholog is 100%.
Bootstrap support for E1ZAY3 as seed ortholog is 100%.

Group of orthologs #1070. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:60

E7FHS1              	100.00%		E1Z5M4              	100.00%
Bootstrap support for E7FHS1 as seed ortholog is 100%.
Bootstrap support for E1Z5M4 as seed ortholog is 95%.

Group of orthologs #1071. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:11

Q753Q5              	100.00%		E1Z709              	100.00%
Bootstrap support for Q753Q5 as seed ortholog is 100%.
Bootstrap support for E1Z709 as seed ortholog is 31%.
Alternative seed ortholog is E1ZDQ5 (11 bits away from this cluster)

Group of orthologs #1072. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:109

Q753N4              	100.00%		E1Z986              	100.00%
Bootstrap support for Q753N4 as seed ortholog is 100%.
Bootstrap support for E1Z986 as seed ortholog is 100%.

Group of orthologs #1073. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:109

Q756N9              	100.00%		E1Z7N2              	100.00%
Bootstrap support for Q756N9 as seed ortholog is 100%.
Bootstrap support for E1Z7N2 as seed ortholog is 100%.

Group of orthologs #1074. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:62

Q754L9              	100.00%		E1ZDC9              	100.00%
Bootstrap support for Q754L9 as seed ortholog is 100%.
Bootstrap support for E1ZDC9 as seed ortholog is 99%.

Group of orthologs #1075. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:50

Q751A5              	100.00%		E1ZKZ7              	100.00%
Bootstrap support for Q751A5 as seed ortholog is 100%.
Bootstrap support for E1ZKZ7 as seed ortholog is 89%.

Group of orthologs #1076. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:36 C.variabilis:109

Q759R2              	100.00%		E1ZGD5              	100.00%
Bootstrap support for Q759R2 as seed ortholog is 83%.
Bootstrap support for E1ZGD5 as seed ortholog is 100%.

Group of orthologs #1077. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:109

Q75E87              	100.00%		E1ZG54              	100.00%
Bootstrap support for Q75E87 as seed ortholog is 100%.
Bootstrap support for E1ZG54 as seed ortholog is 100%.

Group of orthologs #1078. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:54

Q75EZ3              	100.00%		E1ZGU7              	100.00%
Bootstrap support for Q75EZ3 as seed ortholog is 100%.
Bootstrap support for E1ZGU7 as seed ortholog is 98%.

Group of orthologs #1079. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:109

Q75BL0              	100.00%		E1ZRS3              	100.00%
Bootstrap support for Q75BL0 as seed ortholog is 100%.
Bootstrap support for E1ZRS3 as seed ortholog is 100%.

Group of orthologs #1080. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:109

Q75BX4              	100.00%		E1ZU01              	100.00%
Bootstrap support for Q75BX4 as seed ortholog is 100%.
Bootstrap support for E1ZU01 as seed ortholog is 100%.

Group of orthologs #1081. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 C.variabilis:10

Q75DW3              	100.00%		E1ZSR2              	100.00%
Bootstrap support for Q75DW3 as seed ortholog is 100%.
Bootstrap support for E1ZSR2 as seed ortholog is 55%.
Alternative seed ortholog is E1ZHA7 (10 bits away from this cluster)

Group of orthologs #1082. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q753T7              	100.00%		E1ZKI9              	100.00%
                    	       		E1ZF44              	25.31%
Bootstrap support for Q753T7 as seed ortholog is 100%.
Bootstrap support for E1ZKI9 as seed ortholog is 100%.

Group of orthologs #1083. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:45

Q75EU7              	100.00%		E1ZLB3              	100.00%
                    	       		E1ZLW0              	12.43%
Bootstrap support for Q75EU7 as seed ortholog is 100%.
Bootstrap support for E1ZLB3 as seed ortholog is 82%.

Group of orthologs #1084. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q75EE5              	100.00%		E1ZR76              	100.00%
                    	       		E1ZP63              	5.84%
Bootstrap support for Q75EE5 as seed ortholog is 100%.
Bootstrap support for E1ZR76 as seed ortholog is 100%.

Group of orthologs #1085. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q74Z69              	100.00%		E1Z2U4              	100.00%
Bootstrap support for Q74Z69 as seed ortholog is 100%.
Bootstrap support for E1Z2U4 as seed ortholog is 100%.

Group of orthologs #1086. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q75AU7              	100.00%		E1Z8R6              	100.00%
Bootstrap support for Q75AU7 as seed ortholog is 100%.
Bootstrap support for E1Z8R6 as seed ortholog is 100%.

Group of orthologs #1087. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q751H4              	100.00%		E1ZGQ1              	100.00%
Bootstrap support for Q751H4 as seed ortholog is 100%.
Bootstrap support for E1ZGQ1 as seed ortholog is 100%.

Group of orthologs #1088. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:24

Q755B4              	100.00%		E1ZF49              	100.00%
Bootstrap support for Q755B4 as seed ortholog is 100%.
Bootstrap support for E1ZF49 as seed ortholog is 86%.

Group of orthologs #1089. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q751Z7              	100.00%		E1ZME0              	100.00%
Bootstrap support for Q751Z7 as seed ortholog is 100%.
Bootstrap support for E1ZME0 as seed ortholog is 100%.

Group of orthologs #1090. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:40

Q752U4              	100.00%		E1ZNQ8              	100.00%
Bootstrap support for Q752U4 as seed ortholog is 100%.
Bootstrap support for E1ZNQ8 as seed ortholog is 87%.

Group of orthologs #1091. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q74ZG6              	100.00%		E1ZSB9              	100.00%
Bootstrap support for Q74ZG6 as seed ortholog is 100%.
Bootstrap support for E1ZSB9 as seed ortholog is 100%.

Group of orthologs #1092. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q750X5              	100.00%		E1ZST9              	100.00%
Bootstrap support for Q750X5 as seed ortholog is 100%.
Bootstrap support for E1ZST9 as seed ortholog is 100%.

Group of orthologs #1093. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q75C23              	100.00%		E1ZQ82              	100.00%
Bootstrap support for Q75C23 as seed ortholog is 100%.
Bootstrap support for E1ZQ82 as seed ortholog is 100%.

Group of orthologs #1094. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q75AQ4              	100.00%		E1ZRQ8              	100.00%
Bootstrap support for Q75AQ4 as seed ortholog is 100%.
Bootstrap support for E1ZRQ8 as seed ortholog is 100%.

Group of orthologs #1095. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q8NJR2              	100.00%		E1ZMM3              	100.00%
Bootstrap support for Q8NJR2 as seed ortholog is 100%.
Bootstrap support for E1ZMM3 as seed ortholog is 100%.

Group of orthologs #1096. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q75F86              	100.00%		E1ZQJ3              	100.00%
Bootstrap support for Q75F86 as seed ortholog is 100%.
Bootstrap support for E1ZQJ3 as seed ortholog is 100%.

Group of orthologs #1097. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.variabilis:108

Q75DL1              	100.00%		F2YGQ5              	100.00%
Bootstrap support for Q75DL1 as seed ortholog is 100%.
Bootstrap support for F2YGQ5 as seed ortholog is 100%.

Group of orthologs #1098. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:107

Q756L6              	100.00%		E1ZR42              	100.00%
Q752K3              	23.66%		
Q754F9              	18.15%		
Q75ES8              	15.33%		
Q755S3              	12.80%		
Q752Z7              	12.35%		
Q75E29              	8.63%		
Q74ZM3              	6.55%		
Bootstrap support for Q756L6 as seed ortholog is 100%.
Bootstrap support for E1ZR42 as seed ortholog is 100%.

Group of orthologs #1099. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:107

Q75DZ3              	100.00%		E1Z3W5              	100.00%
Bootstrap support for Q75DZ3 as seed ortholog is 100%.
Bootstrap support for E1Z3W5 as seed ortholog is 100%.

Group of orthologs #1100. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:107

Q75DK4              	100.00%		E1Z678              	100.00%
Bootstrap support for Q75DK4 as seed ortholog is 100%.
Bootstrap support for E1Z678 as seed ortholog is 100%.

Group of orthologs #1101. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:107

Q74Z09              	100.00%		E1ZPD5              	100.00%
Bootstrap support for Q74Z09 as seed ortholog is 100%.
Bootstrap support for E1ZPD5 as seed ortholog is 100%.

Group of orthologs #1102. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:107

Q75DK8              	100.00%		E1ZF31              	100.00%
Bootstrap support for Q75DK8 as seed ortholog is 100%.
Bootstrap support for E1ZF31 as seed ortholog is 100%.

Group of orthologs #1103. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 C.variabilis:107

Q754F5              	100.00%		E1ZTK6              	100.00%
Bootstrap support for Q754F5 as seed ortholog is 100%.
Bootstrap support for E1ZTK6 as seed ortholog is 100%.

Group of orthologs #1104. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q757R0              	100.00%		E1ZBG9              	100.00%
                    	       		E1ZUA6              	21.91%
                    	       		E1ZS62              	19.85%
                    	       		E1ZS67              	17.31%
                    	       		E1ZJH4              	15.86%
                    	       		E1ZF63              	11.74%
                    	       		E1ZS78              	11.50%
                    	       		E1ZS68              	5.57%
Bootstrap support for Q757R0 as seed ortholog is 100%.
Bootstrap support for E1ZBG9 as seed ortholog is 100%.

Group of orthologs #1105. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:52

Q75F17              	100.00%		E1ZLM1              	100.00%
                    	       		E1ZPZ5              	16.04%
                    	       		E1Z8D1              	13.96%
                    	       		E1ZTY7              	8.11%
                    	       		E1ZHZ7              	5.28%
Bootstrap support for Q75F17 as seed ortholog is 100%.
Bootstrap support for E1ZLM1 as seed ortholog is 91%.

Group of orthologs #1106. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q75DT2              	100.00%		E1ZG08              	100.00%
                    	       		E1ZPL1              	17.43%
                    	       		E1ZG04              	7.29%
Bootstrap support for Q75DT2 as seed ortholog is 100%.
Bootstrap support for E1ZG08 as seed ortholog is 100%.

Group of orthologs #1107. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q75C86              	100.00%		E1ZFK2              	100.00%
                    	       		E1Z7R3              	44.78%
Bootstrap support for Q75C86 as seed ortholog is 100%.
Bootstrap support for E1ZFK2 as seed ortholog is 100%.

Group of orthologs #1108. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q75CT6              	100.00%		E1Z4X2              	100.00%
Bootstrap support for Q75CT6 as seed ortholog is 100%.
Bootstrap support for E1Z4X2 as seed ortholog is 100%.

Group of orthologs #1109. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q751L5              	100.00%		E1ZFT4              	100.00%
Bootstrap support for Q751L5 as seed ortholog is 100%.
Bootstrap support for E1ZFT4 as seed ortholog is 100%.

Group of orthologs #1110. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q753B6              	100.00%		E1ZPW5              	100.00%
Bootstrap support for Q753B6 as seed ortholog is 100%.
Bootstrap support for E1ZPW5 as seed ortholog is 100%.

Group of orthologs #1111. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q752K5              	100.00%		E1ZTM9              	100.00%
Bootstrap support for Q752K5 as seed ortholog is 100%.
Bootstrap support for E1ZTM9 as seed ortholog is 100%.

Group of orthologs #1112. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 C.variabilis:106

Q75F31              	100.00%		E1ZPL9              	100.00%
Bootstrap support for Q75F31 as seed ortholog is 100%.
Bootstrap support for E1ZPL9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:105

Q74ZN6              	100.00%		E1ZIY8              	100.00%
                    	       		E1ZU91              	52.54%
Bootstrap support for Q74ZN6 as seed ortholog is 100%.
Bootstrap support for E1ZIY8 as seed ortholog is 100%.

Group of orthologs #1114. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:105

Q74ZU0              	100.00%		E1Z672              	100.00%
Bootstrap support for Q74ZU0 as seed ortholog is 100%.
Bootstrap support for E1Z672 as seed ortholog is 100%.

Group of orthologs #1115. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:105

Q750F6              	100.00%		E1ZJA4              	100.00%
Bootstrap support for Q750F6 as seed ortholog is 100%.
Bootstrap support for E1ZJA4 as seed ortholog is 100%.

Group of orthologs #1116. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:105

Q758W6              	100.00%		E1ZI38              	100.00%
Bootstrap support for Q758W6 as seed ortholog is 100%.
Bootstrap support for E1ZI38 as seed ortholog is 100%.

Group of orthologs #1117. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:105

Q751L6              	100.00%		E1ZTF2              	100.00%
Bootstrap support for Q751L6 as seed ortholog is 100%.
Bootstrap support for E1ZTF2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 C.variabilis:10

Q75A65              	100.00%		E1ZQ74              	100.00%
Bootstrap support for Q75A65 as seed ortholog is 100%.
Bootstrap support for E1ZQ74 as seed ortholog is 70%.
Alternative seed ortholog is E1ZQG3 (10 bits away from this cluster)

Group of orthologs #1119. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 C.variabilis:104

Q74Z75              	100.00%		E1Z927              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for E1Z927 as seed ortholog is 100%.

Group of orthologs #1120. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 C.variabilis:104

Q75A09              	100.00%		E1Z6V1              	100.00%
Bootstrap support for Q75A09 as seed ortholog is 100%.
Bootstrap support for E1Z6V1 as seed ortholog is 100%.

Group of orthologs #1121. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 C.variabilis:104

Q75ED1              	100.00%		E1Z780              	100.00%
Bootstrap support for Q75ED1 as seed ortholog is 100%.
Bootstrap support for E1Z780 as seed ortholog is 100%.

Group of orthologs #1122. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 C.variabilis:104

Q75CP2              	100.00%		E1Z977              	100.00%
Bootstrap support for Q75CP2 as seed ortholog is 100%.
Bootstrap support for E1Z977 as seed ortholog is 100%.

Group of orthologs #1123. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 C.variabilis:104

Q75BL5              	100.00%		E1ZDG0              	100.00%
Bootstrap support for Q75BL5 as seed ortholog is 100%.
Bootstrap support for E1ZDG0 as seed ortholog is 100%.

Group of orthologs #1124. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 C.variabilis:103

Q758B7              	100.00%		E1ZD73              	100.00%
Q757G3              	17.74%		
Bootstrap support for Q758B7 as seed ortholog is 100%.
Bootstrap support for E1ZD73 as seed ortholog is 100%.

Group of orthologs #1125. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 C.variabilis:27

Q750M6              	100.00%		E1Z9K5              	100.00%
Bootstrap support for Q750M6 as seed ortholog is 100%.
Bootstrap support for E1Z9K5 as seed ortholog is 86%.

Group of orthologs #1126. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 C.variabilis:6

Q757B7              	100.00%		E1Z5I1              	100.00%
Bootstrap support for Q757B7 as seed ortholog is 100%.
Bootstrap support for E1Z5I1 as seed ortholog is 61%.
Alternative seed ortholog is E1ZFP3 (6 bits away from this cluster)

Group of orthologs #1127. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 C.variabilis:103

Q754Y4              	100.00%		E1Z9Z9              	100.00%
Bootstrap support for Q754Y4 as seed ortholog is 100%.
Bootstrap support for E1Z9Z9 as seed ortholog is 100%.

Group of orthologs #1128. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 C.variabilis:9

Q754K8              	100.00%		E1ZBC1              	100.00%
Bootstrap support for Q754K8 as seed ortholog is 100%.
Bootstrap support for E1ZBC1 as seed ortholog is 70%.
Alternative seed ortholog is E1ZSK9 (9 bits away from this cluster)

Group of orthologs #1129. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:34

Q74ZG5              	100.00%		E1Z8G2              	100.00%
Bootstrap support for Q74ZG5 as seed ortholog is 100%.
Bootstrap support for E1Z8G2 as seed ortholog is 93%.

Group of orthologs #1130. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q756A6              	100.00%		E1Z4I9              	100.00%
Bootstrap support for Q756A6 as seed ortholog is 100%.
Bootstrap support for E1Z4I9 as seed ortholog is 100%.

Group of orthologs #1131. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:102

Q750G9              	100.00%		E1ZA78              	100.00%
Bootstrap support for Q750G9 as seed ortholog is 97%.
Bootstrap support for E1ZA78 as seed ortholog is 100%.

Group of orthologs #1132. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q74ZC2              	100.00%		E1ZCD0              	100.00%
Bootstrap support for Q74ZC2 as seed ortholog is 100%.
Bootstrap support for E1ZCD0 as seed ortholog is 100%.

Group of orthologs #1133. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:11 C.variabilis:102

Q75FB0              	100.00%		E1Z2D8              	100.00%
Bootstrap support for Q75FB0 as seed ortholog is 59%.
Alternative seed ortholog is Q75FA9 (11 bits away from this cluster)
Bootstrap support for E1Z2D8 as seed ortholog is 100%.

Group of orthologs #1134. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q75F96              	100.00%		E1Z354              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for E1Z354 as seed ortholog is 100%.

Group of orthologs #1135. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:46 C.variabilis:39

Q750C6              	100.00%		E1ZHH3              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 95%.
Bootstrap support for E1ZHH3 as seed ortholog is 93%.

Group of orthologs #1136. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q75E69              	100.00%		E1Z8E3              	100.00%
Bootstrap support for Q75E69 as seed ortholog is 100%.
Bootstrap support for E1Z8E3 as seed ortholog is 100%.

Group of orthologs #1137. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q753R0              	100.00%		E1ZJJ5              	100.00%
Bootstrap support for Q753R0 as seed ortholog is 100%.
Bootstrap support for E1ZJJ5 as seed ortholog is 100%.

Group of orthologs #1138. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q75BU6              	100.00%		E1ZGC5              	100.00%
Bootstrap support for Q75BU6 as seed ortholog is 100%.
Bootstrap support for E1ZGC5 as seed ortholog is 100%.

Group of orthologs #1139. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q752M2              	100.00%		E1ZQK7              	100.00%
Bootstrap support for Q752M2 as seed ortholog is 100%.
Bootstrap support for E1ZQK7 as seed ortholog is 100%.

Group of orthologs #1140. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q75DR6              	100.00%		E1ZHM2              	100.00%
Bootstrap support for Q75DR6 as seed ortholog is 100%.
Bootstrap support for E1ZHM2 as seed ortholog is 100%.

Group of orthologs #1141. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 C.variabilis:102

Q755C8              	100.00%		E1ZUF7              	100.00%
Bootstrap support for Q755C8 as seed ortholog is 100%.
Bootstrap support for E1ZUF7 as seed ortholog is 100%.

Group of orthologs #1142. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:5 C.variabilis:6

Q750M1              	100.00%		E1Z7Y9              	100.00%
Q751L2              	10.44%		E1Z4T8              	13.75%
Q753S3              	6.26%		E1Z4S6              	7.29%
Bootstrap support for Q750M1 as seed ortholog is 43%.
Alternative seed ortholog is Q75CE7 (5 bits away from this cluster)
Bootstrap support for E1Z7Y9 as seed ortholog is 72%.
Alternative seed ortholog is E1ZDX7 (6 bits away from this cluster)

Group of orthologs #1143. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:101

Q75DF9              	100.00%		E1Z9D1              	100.00%
Bootstrap support for Q75DF9 as seed ortholog is 100%.
Bootstrap support for E1Z9D1 as seed ortholog is 100%.

Group of orthologs #1144. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:101

Q758H2              	100.00%		E1ZFX3              	100.00%
Bootstrap support for Q758H2 as seed ortholog is 100%.
Bootstrap support for E1ZFX3 as seed ortholog is 100%.

Group of orthologs #1145. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:101

Q75AK4              	100.00%		E1ZFK7              	100.00%
Bootstrap support for Q75AK4 as seed ortholog is 100%.
Bootstrap support for E1ZFK7 as seed ortholog is 100%.

Group of orthologs #1146. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:101

Q758Y2              	100.00%		E1ZLH9              	100.00%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for E1ZLH9 as seed ortholog is 100%.

Group of orthologs #1147. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 C.variabilis:101

Q75EM8              	100.00%		E1ZH55              	100.00%
Bootstrap support for Q75EM8 as seed ortholog is 100%.
Bootstrap support for E1ZH55 as seed ortholog is 100%.

Group of orthologs #1148. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:100

Q751E0              	100.00%		E1Z4F1              	100.00%
Bootstrap support for Q751E0 as seed ortholog is 100%.
Bootstrap support for E1Z4F1 as seed ortholog is 100%.

Group of orthologs #1149. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:13

Q75AK8              	100.00%		E1Z441              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for E1Z441 as seed ortholog is 67%.
Alternative seed ortholog is E1ZEK2 (13 bits away from this cluster)

Group of orthologs #1150. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:100

Q75C08              	100.00%		E1Z5A8              	100.00%
Bootstrap support for Q75C08 as seed ortholog is 100%.
Bootstrap support for E1Z5A8 as seed ortholog is 100%.

Group of orthologs #1151. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:100

Q75BU7              	100.00%		E1ZAB7              	100.00%
Bootstrap support for Q75BU7 as seed ortholog is 100%.
Bootstrap support for E1ZAB7 as seed ortholog is 100%.

Group of orthologs #1152. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:39

Q75D70              	100.00%		E1ZGW0              	100.00%
Bootstrap support for Q75D70 as seed ortholog is 100%.
Bootstrap support for E1ZGW0 as seed ortholog is 98%.

Group of orthologs #1153. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 C.variabilis:100

Q75D86              	100.00%		E1ZJS1              	100.00%
Bootstrap support for Q75D86 as seed ortholog is 100%.
Bootstrap support for E1ZJS1 as seed ortholog is 100%.

Group of orthologs #1154. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 C.variabilis:99

Q753K8              	100.00%		E1Z4N8              	100.00%
                    	       		E1Z5E0              	19.22%
                    	       		E1Z5D8              	18.36%
                    	       		E1Z8U7              	17.02%
Bootstrap support for Q753K8 as seed ortholog is 100%.
Bootstrap support for E1Z4N8 as seed ortholog is 100%.

Group of orthologs #1155. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 C.variabilis:23

Q755Z4              	100.00%		E1ZB18              	100.00%
Bootstrap support for Q755Z4 as seed ortholog is 100%.
Bootstrap support for E1ZB18 as seed ortholog is 77%.

Group of orthologs #1156. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 C.variabilis:99

Q750K4              	100.00%		E1ZFP0              	100.00%
Bootstrap support for Q750K4 as seed ortholog is 100%.
Bootstrap support for E1ZFP0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 C.variabilis:99

Q753F1              	100.00%		E1ZGD7              	100.00%
Bootstrap support for Q753F1 as seed ortholog is 100%.
Bootstrap support for E1ZGD7 as seed ortholog is 100%.

Group of orthologs #1158. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 C.variabilis:99

Q74ZD8              	100.00%		E1ZQ26              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for E1ZQ26 as seed ortholog is 100%.

Group of orthologs #1159. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:99

Q75EP6              	100.00%		E1ZE00              	100.00%
Bootstrap support for Q75EP6 as seed ortholog is 88%.
Bootstrap support for E1ZE00 as seed ortholog is 100%.

Group of orthologs #1160. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 C.variabilis:99

Q752F0              	100.00%		E1ZRJ0              	100.00%
Bootstrap support for Q752F0 as seed ortholog is 100%.
Bootstrap support for E1ZRJ0 as seed ortholog is 100%.

Group of orthologs #1161. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 C.variabilis:98

Q756J2              	100.00%		E1ZNG4              	100.00%
                    	       		E1ZNG3              	50.14%
Bootstrap support for Q756J2 as seed ortholog is 100%.
Bootstrap support for E1ZNG4 as seed ortholog is 100%.

Group of orthologs #1162. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 C.variabilis:98

Q753U1              	100.00%		E1Z8D8              	100.00%
Bootstrap support for Q753U1 as seed ortholog is 100%.
Bootstrap support for E1Z8D8 as seed ortholog is 100%.

Group of orthologs #1163. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 C.variabilis:98

Q75BD1              	100.00%		E1Z6V2              	100.00%
Bootstrap support for Q75BD1 as seed ortholog is 100%.
Bootstrap support for E1Z6V2 as seed ortholog is 100%.

Group of orthologs #1164. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 C.variabilis:98

Q75F50              	100.00%		E1Z4S2              	100.00%
Bootstrap support for Q75F50 as seed ortholog is 100%.
Bootstrap support for E1Z4S2 as seed ortholog is 100%.

Group of orthologs #1165. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 C.variabilis:98

Q753C9              	100.00%		E1ZLY7              	100.00%
Bootstrap support for Q753C9 as seed ortholog is 100%.
Bootstrap support for E1ZLY7 as seed ortholog is 100%.

Group of orthologs #1166. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 C.variabilis:98

Q75DY4              	100.00%		F2YGN8              	100.00%
Bootstrap support for Q75DY4 as seed ortholog is 100%.
Bootstrap support for F2YGN8 as seed ortholog is 100%.

Group of orthologs #1167. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:97

Q750R8              	100.00%		E1ZMH5              	100.00%
                    	       		E1ZR44              	12.34%
Bootstrap support for Q750R8 as seed ortholog is 100%.
Bootstrap support for E1ZMH5 as seed ortholog is 100%.

Group of orthologs #1168. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:97

Q74ZP5              	100.00%		E1Z5T1              	100.00%
Bootstrap support for Q74ZP5 as seed ortholog is 100%.
Bootstrap support for E1Z5T1 as seed ortholog is 100%.

Group of orthologs #1169. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:22

Q74ZW2              	100.00%		E1Z846              	100.00%
Bootstrap support for Q74ZW2 as seed ortholog is 100%.
Bootstrap support for E1Z846 as seed ortholog is 81%.

Group of orthologs #1170. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:97

Q756P4              	100.00%		E1Z835              	100.00%
Bootstrap support for Q756P4 as seed ortholog is 100%.
Bootstrap support for E1Z835 as seed ortholog is 100%.

Group of orthologs #1171. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:97

Q75CV5              	100.00%		E1Z4F5              	100.00%
Bootstrap support for Q75CV5 as seed ortholog is 100%.
Bootstrap support for E1Z4F5 as seed ortholog is 100%.

Group of orthologs #1172. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:97

Q750P0              	100.00%		E1ZKG7              	100.00%
Bootstrap support for Q750P0 as seed ortholog is 100%.
Bootstrap support for E1ZKG7 as seed ortholog is 100%.

Group of orthologs #1173. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:37

Q74ZA6              	100.00%		E1ZN49              	100.00%
Bootstrap support for Q74ZA6 as seed ortholog is 100%.
Bootstrap support for E1ZN49 as seed ortholog is 85%.

Group of orthologs #1174. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 C.variabilis:97

Q75BQ0              	100.00%		E1ZJA0              	100.00%
Bootstrap support for Q75BQ0 as seed ortholog is 100%.
Bootstrap support for E1ZJA0 as seed ortholog is 100%.

Group of orthologs #1175. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q755V7              	100.00%		E1ZKR4              	100.00%
Q756V3              	15.23%		
Bootstrap support for Q755V7 as seed ortholog is 100%.
Bootstrap support for E1ZKR4 as seed ortholog is 100%.

Group of orthologs #1176. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q757U3              	100.00%		E1Z1W0              	100.00%
Bootstrap support for Q757U3 as seed ortholog is 100%.
Bootstrap support for E1Z1W0 as seed ortholog is 100%.

Group of orthologs #1177. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q759E4              	100.00%		E1Z8B0              	100.00%
Bootstrap support for Q759E4 as seed ortholog is 100%.
Bootstrap support for E1Z8B0 as seed ortholog is 100%.

Group of orthologs #1178. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q75BV8              	100.00%		E1Z6Q4              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for E1Z6Q4 as seed ortholog is 100%.

Group of orthologs #1179. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q758J7              	100.00%		E1ZAZ4              	100.00%
Bootstrap support for Q758J7 as seed ortholog is 100%.
Bootstrap support for E1ZAZ4 as seed ortholog is 100%.

Group of orthologs #1180. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q74ZX9              	100.00%		E1ZNR8              	100.00%
Bootstrap support for Q74ZX9 as seed ortholog is 100%.
Bootstrap support for E1ZNR8 as seed ortholog is 100%.

Group of orthologs #1181. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:5

Q75CU5              	100.00%		E1ZEB1              	100.00%
Bootstrap support for Q75CU5 as seed ortholog is 100%.
Bootstrap support for E1ZEB1 as seed ortholog is 50%.
Alternative seed ortholog is E1ZKS4 (5 bits away from this cluster)

Group of orthologs #1182. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q755B3              	100.00%		E1ZLF2              	100.00%
Bootstrap support for Q755B3 as seed ortholog is 100%.
Bootstrap support for E1ZLF2 as seed ortholog is 100%.

Group of orthologs #1183. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q75E22              	100.00%		E1ZG76              	100.00%
Bootstrap support for Q75E22 as seed ortholog is 100%.
Bootstrap support for E1ZG76 as seed ortholog is 100%.

Group of orthologs #1184. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q75B82              	100.00%		E1ZJT5              	100.00%
Bootstrap support for Q75B82 as seed ortholog is 100%.
Bootstrap support for E1ZJT5 as seed ortholog is 100%.

Group of orthologs #1185. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 C.variabilis:96

Q757N8              	100.00%		E1ZP46              	100.00%
Bootstrap support for Q757N8 as seed ortholog is 100%.
Bootstrap support for E1ZP46 as seed ortholog is 100%.

Group of orthologs #1186. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 C.variabilis:95

Q750F5              	100.00%		E1ZDW8              	100.00%
Bootstrap support for Q750F5 as seed ortholog is 100%.
Bootstrap support for E1ZDW8 as seed ortholog is 100%.

Group of orthologs #1187. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 C.variabilis:95

Q759J1              	100.00%		E1ZAY6              	100.00%
Bootstrap support for Q759J1 as seed ortholog is 100%.
Bootstrap support for E1ZAY6 as seed ortholog is 100%.

Group of orthologs #1188. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 C.variabilis:95

Q75AK0              	100.00%		E1ZIL3              	100.00%
Bootstrap support for Q75AK0 as seed ortholog is 100%.
Bootstrap support for E1ZIL3 as seed ortholog is 100%.

Group of orthologs #1189. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:48 C.variabilis:35

Q758B6              	100.00%		E1ZCN2              	100.00%
Bootstrap support for Q758B6 as seed ortholog is 88%.
Bootstrap support for E1ZCN2 as seed ortholog is 80%.

Group of orthologs #1190. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 C.variabilis:94

Q75D63              	100.00%		E1ZD32              	100.00%
Bootstrap support for Q75D63 as seed ortholog is 100%.
Bootstrap support for E1ZD32 as seed ortholog is 100%.

Group of orthologs #1191. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 C.variabilis:47

Q759U0              	100.00%		E1ZPZ4              	100.00%
Bootstrap support for Q759U0 as seed ortholog is 100%.
Bootstrap support for E1ZPZ4 as seed ortholog is 89%.

Group of orthologs #1192. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:93

Q756R2              	100.00%		E1ZCB4              	100.00%
Q754C6              	14.32%		E1ZCB6              	98.71%
                    	       		E1ZKE7              	91.52%
Bootstrap support for Q756R2 as seed ortholog is 100%.
Bootstrap support for E1ZCB4 as seed ortholog is 100%.

Group of orthologs #1193. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:21

Q75AS4              	100.00%		E1Z514              	100.00%
                    	       		E1ZMY2              	10.03%
Bootstrap support for Q75AS4 as seed ortholog is 100%.
Bootstrap support for E1Z514 as seed ortholog is 81%.

Group of orthologs #1194. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:93

D8FGD7              	100.00%		E1ZGP1              	100.00%
                    	       		E1ZL65              	11.26%
Bootstrap support for D8FGD7 as seed ortholog is 100%.
Bootstrap support for E1ZGP1 as seed ortholog is 100%.

Group of orthologs #1195. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:93

Q755J1              	100.00%		E1Z4S0              	100.00%
Bootstrap support for Q755J1 as seed ortholog is 100%.
Bootstrap support for E1Z4S0 as seed ortholog is 100%.

Group of orthologs #1196. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:93

Q753P6              	100.00%		E1ZB47              	100.00%
Bootstrap support for Q753P6 as seed ortholog is 100%.
Bootstrap support for E1ZB47 as seed ortholog is 100%.

Group of orthologs #1197. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 C.variabilis:93

Q75D12              	100.00%		E1Z788              	100.00%
Bootstrap support for Q75D12 as seed ortholog is 100%.
Bootstrap support for E1Z788 as seed ortholog is 100%.

Group of orthologs #1198. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 C.variabilis:92

Q75BS0              	100.00%		E1Z978              	100.00%
Bootstrap support for Q75BS0 as seed ortholog is 100%.
Bootstrap support for E1Z978 as seed ortholog is 100%.

Group of orthologs #1199. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 C.variabilis:92

Q759K1              	100.00%		E1ZBM6              	100.00%
Bootstrap support for Q759K1 as seed ortholog is 100%.
Bootstrap support for E1ZBM6 as seed ortholog is 100%.

Group of orthologs #1200. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 C.variabilis:92

Q75CN9              	100.00%		E1Z8L6              	100.00%
Bootstrap support for Q75CN9 as seed ortholog is 100%.
Bootstrap support for E1Z8L6 as seed ortholog is 100%.

Group of orthologs #1201. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 C.variabilis:92

Q750K6              	100.00%		E1ZIA0              	100.00%
Bootstrap support for Q750K6 as seed ortholog is 100%.
Bootstrap support for E1ZIA0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:91

Q759V2              	100.00%		E1ZC45              	100.00%
Q75AW2              	25.35%		
Bootstrap support for Q759V2 as seed ortholog is 100%.
Bootstrap support for E1ZC45 as seed ortholog is 100%.

Group of orthologs #1203. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:91

Q754E3              	100.00%		E1Z867              	100.00%
Bootstrap support for Q754E3 as seed ortholog is 100%.
Bootstrap support for E1Z867 as seed ortholog is 100%.

Group of orthologs #1204. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:3

Q754T9              	100.00%		E1ZEA7              	100.00%
Bootstrap support for Q754T9 as seed ortholog is 100%.
Bootstrap support for E1ZEA7 as seed ortholog is 61%.
Alternative seed ortholog is E1ZCY0 (3 bits away from this cluster)

Group of orthologs #1205. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:91

Q75D53              	100.00%		E1Z9Q1              	100.00%
Bootstrap support for Q75D53 as seed ortholog is 100%.
Bootstrap support for E1Z9Q1 as seed ortholog is 100%.

Group of orthologs #1206. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:13

Q751H2              	100.00%		E1ZMG3              	100.00%
Bootstrap support for Q751H2 as seed ortholog is 100%.
Bootstrap support for E1ZMG3 as seed ortholog is 56%.
Alternative seed ortholog is E1ZDM2 (13 bits away from this cluster)

Group of orthologs #1207. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:91

Q75A81              	100.00%		E1ZRD6              	100.00%
Bootstrap support for Q75A81 as seed ortholog is 100%.
Bootstrap support for E1ZRD6 as seed ortholog is 100%.

Group of orthologs #1208. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:19

Q757X9              	100.00%		F2YGN7              	100.00%
Bootstrap support for Q757X9 as seed ortholog is 100%.
Bootstrap support for F2YGN7 as seed ortholog is 73%.
Alternative seed ortholog is E1ZSW9 (19 bits away from this cluster)

Group of orthologs #1209. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 C.variabilis:91

Q75EH2              	100.00%		E1ZTU4              	100.00%
Bootstrap support for Q75EH2 as seed ortholog is 100%.
Bootstrap support for E1ZTU4 as seed ortholog is 100%.

Group of orthologs #1210. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:31

Q752B5              	100.00%		E1Z2P7              	100.00%
Q75E68              	32.70%		
Bootstrap support for Q752B5 as seed ortholog is 93%.
Bootstrap support for E1Z2P7 as seed ortholog is 86%.

Group of orthologs #1211. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 C.variabilis:90

Q75DF5              	100.00%		E1ZAB9              	100.00%
Bootstrap support for Q75DF5 as seed ortholog is 100%.
Bootstrap support for E1ZAB9 as seed ortholog is 100%.

Group of orthologs #1212. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:29

Q75BV5              	100.00%		E1Z3C2              	100.00%
Bootstrap support for Q75BV5 as seed ortholog is 100%.
Bootstrap support for E1Z3C2 as seed ortholog is 66%.
Alternative seed ortholog is E1ZQI8 (29 bits away from this cluster)

Group of orthologs #1213. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:89

Q751I8              	100.00%		E1ZCB1              	100.00%
Bootstrap support for Q751I8 as seed ortholog is 100%.
Bootstrap support for E1ZCB1 as seed ortholog is 100%.

Group of orthologs #1214. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:89

Q75F52              	100.00%		E1Z240              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 87%.
Bootstrap support for E1Z240 as seed ortholog is 100%.

Group of orthologs #1215. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:89

Q751K2              	100.00%		E1ZE09              	100.00%
Bootstrap support for Q751K2 as seed ortholog is 100%.
Bootstrap support for E1ZE09 as seed ortholog is 100%.

Group of orthologs #1216. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:25

Q75DB7              	100.00%		E1Z5I6              	100.00%
Bootstrap support for Q75DB7 as seed ortholog is 100%.
Bootstrap support for E1Z5I6 as seed ortholog is 90%.

Group of orthologs #1217. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:89

Q75D24              	100.00%		E1Z5U1              	100.00%
Bootstrap support for Q75D24 as seed ortholog is 100%.
Bootstrap support for E1Z5U1 as seed ortholog is 100%.

Group of orthologs #1218. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:44 C.variabilis:89

Q75A14              	100.00%		E1Z9Z4              	100.00%
Bootstrap support for Q75A14 as seed ortholog is 89%.
Bootstrap support for E1Z9Z4 as seed ortholog is 100%.

Group of orthologs #1219. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:29

Q75CV4              	100.00%		E1ZBL5              	100.00%
Bootstrap support for Q75CV4 as seed ortholog is 100%.
Bootstrap support for E1ZBL5 as seed ortholog is 97%.

Group of orthologs #1220. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:89

Q755N7              	100.00%		E1ZHY5              	100.00%
Bootstrap support for Q755N7 as seed ortholog is 100%.
Bootstrap support for E1ZHY5 as seed ortholog is 100%.

Group of orthologs #1221. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 C.variabilis:89

Q759I3              	100.00%		E1ZK89              	100.00%
Bootstrap support for Q759I3 as seed ortholog is 100%.
Bootstrap support for E1ZK89 as seed ortholog is 100%.

Group of orthologs #1222. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 C.variabilis:88

Q753R3              	100.00%		E1Z861              	100.00%
Bootstrap support for Q753R3 as seed ortholog is 100%.
Bootstrap support for E1Z861 as seed ortholog is 100%.

Group of orthologs #1223. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 C.variabilis:88

Q75DY2              	100.00%		E1Z272              	100.00%
Bootstrap support for Q75DY2 as seed ortholog is 100%.
Bootstrap support for E1Z272 as seed ortholog is 100%.

Group of orthologs #1224. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 C.variabilis:88

Q756L7              	100.00%		E1ZCU1              	100.00%
Bootstrap support for Q756L7 as seed ortholog is 100%.
Bootstrap support for E1ZCU1 as seed ortholog is 100%.

Group of orthologs #1225. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 C.variabilis:88

Q759N2              	100.00%		E1ZR32              	100.00%
Bootstrap support for Q759N2 as seed ortholog is 100%.
Bootstrap support for E1ZR32 as seed ortholog is 100%.

Group of orthologs #1226. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q751Z5              	100.00%		E1Z2R7              	100.00%
Bootstrap support for Q751Z5 as seed ortholog is 100%.
Bootstrap support for E1Z2R7 as seed ortholog is 100%.

Group of orthologs #1227. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q74ZB2              	100.00%		E1Z807              	100.00%
Bootstrap support for Q74ZB2 as seed ortholog is 100%.
Bootstrap support for E1Z807 as seed ortholog is 100%.

Group of orthologs #1228. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75BL6              	100.00%		E1Z3C3              	100.00%
Bootstrap support for Q75BL6 as seed ortholog is 100%.
Bootstrap support for E1Z3C3 as seed ortholog is 100%.

Group of orthologs #1229. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75AD5              	100.00%		E1Z5Q3              	100.00%
Bootstrap support for Q75AD5 as seed ortholog is 100%.
Bootstrap support for E1Z5Q3 as seed ortholog is 100%.

Group of orthologs #1230. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q756H1              	100.00%		E1Z9P4              	100.00%
Bootstrap support for Q756H1 as seed ortholog is 100%.
Bootstrap support for E1Z9P4 as seed ortholog is 100%.

Group of orthologs #1231. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75AH9              	100.00%		E1Z8H1              	100.00%
Bootstrap support for Q75AH9 as seed ortholog is 100%.
Bootstrap support for E1Z8H1 as seed ortholog is 100%.

Group of orthologs #1232. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75EE3              	100.00%		E1Z863              	100.00%
Bootstrap support for Q75EE3 as seed ortholog is 100%.
Bootstrap support for E1Z863 as seed ortholog is 100%.

Group of orthologs #1233. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75AD1              	100.00%		E1ZE18              	100.00%
Bootstrap support for Q75AD1 as seed ortholog is 100%.
Bootstrap support for E1ZE18 as seed ortholog is 100%.

Group of orthologs #1234. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q74ZT0              	100.00%		E1ZLT4              	100.00%
Bootstrap support for Q74ZT0 as seed ortholog is 100%.
Bootstrap support for E1ZLT4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75DY3              	100.00%		E1ZJC7              	100.00%
Bootstrap support for Q75DY3 as seed ortholog is 100%.
Bootstrap support for E1ZJC7 as seed ortholog is 100%.

Group of orthologs #1236. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 C.variabilis:87

Q75EZ2              	100.00%		E1ZRZ5              	100.00%
Bootstrap support for Q75EZ2 as seed ortholog is 100%.
Bootstrap support for E1ZRZ5 as seed ortholog is 100%.

Group of orthologs #1237. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 C.variabilis:86

Q75A74              	100.00%		E1Z587              	100.00%
                    	       		E1ZBH2              	10.37%
Bootstrap support for Q75A74 as seed ortholog is 100%.
Bootstrap support for E1Z587 as seed ortholog is 100%.

Group of orthologs #1238. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 C.variabilis:86

Q757M3              	100.00%		E1Z1W2              	100.00%
Bootstrap support for Q757M3 as seed ortholog is 100%.
Bootstrap support for E1Z1W2 as seed ortholog is 100%.

Group of orthologs #1239. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 C.variabilis:86

Q755I6              	100.00%		E1Z7C3              	100.00%
Bootstrap support for Q755I6 as seed ortholog is 100%.
Bootstrap support for E1Z7C3 as seed ortholog is 100%.

Group of orthologs #1240. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 C.variabilis:86

Q757W2              	100.00%		E1Z8W8              	100.00%
Bootstrap support for Q757W2 as seed ortholog is 100%.
Bootstrap support for E1Z8W8 as seed ortholog is 100%.

Group of orthologs #1241. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 C.variabilis:23

Q75A53              	100.00%		E1Z800              	100.00%
Bootstrap support for Q75A53 as seed ortholog is 100%.
Bootstrap support for E1Z800 as seed ortholog is 81%.

Group of orthologs #1242. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:23 C.variabilis:86

Q759D2              	100.00%		E1ZAJ6              	100.00%
Bootstrap support for Q759D2 as seed ortholog is 91%.
Bootstrap support for E1ZAJ6 as seed ortholog is 100%.

Group of orthologs #1243. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:24 C.variabilis:86

Q755G2              	100.00%		E1ZKQ7              	100.00%
Bootstrap support for Q755G2 as seed ortholog is 77%.
Bootstrap support for E1ZKQ7 as seed ortholog is 100%.

Group of orthologs #1244. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 C.variabilis:86

Q75B32              	100.00%		E1ZQ38              	100.00%
Bootstrap support for Q75B32 as seed ortholog is 100%.
Bootstrap support for E1ZQ38 as seed ortholog is 100%.

Group of orthologs #1245. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 C.variabilis:85

Q75AW7              	100.00%		E1Z8T3              	100.00%
Bootstrap support for Q75AW7 as seed ortholog is 100%.
Bootstrap support for E1Z8T3 as seed ortholog is 100%.

Group of orthologs #1246. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 C.variabilis:85

Q75DF4              	100.00%		E1Z8M8              	100.00%
Bootstrap support for Q75DF4 as seed ortholog is 100%.
Bootstrap support for E1Z8M8 as seed ortholog is 100%.

Group of orthologs #1247. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 C.variabilis:85

Q75EU5              	100.00%		E1ZJG0              	100.00%
Bootstrap support for Q75EU5 as seed ortholog is 100%.
Bootstrap support for E1ZJG0 as seed ortholog is 100%.

Group of orthologs #1248. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 C.variabilis:85

Q75DT3              	100.00%		E1ZQ55              	100.00%
Bootstrap support for Q75DT3 as seed ortholog is 100%.
Bootstrap support for E1ZQ55 as seed ortholog is 100%.

Group of orthologs #1249. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:84

Q75E51              	100.00%		E1ZSM2              	100.00%
                    	       		E1ZSP5              	7.24%
Bootstrap support for Q75E51 as seed ortholog is 100%.
Bootstrap support for E1ZSM2 as seed ortholog is 100%.

Group of orthologs #1250. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:84

Q755D0              	100.00%		E1ZGV4              	100.00%
Bootstrap support for Q755D0 as seed ortholog is 100%.
Bootstrap support for E1ZGV4 as seed ortholog is 100%.

Group of orthologs #1251. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:84

Q751U0              	100.00%		E1ZKC7              	100.00%
Bootstrap support for Q751U0 as seed ortholog is 100%.
Bootstrap support for E1ZKC7 as seed ortholog is 100%.

Group of orthologs #1252. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:84

Q75BW2              	100.00%		E1ZCS4              	100.00%
Bootstrap support for Q75BW2 as seed ortholog is 100%.
Bootstrap support for E1ZCS4 as seed ortholog is 100%.

Group of orthologs #1253. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:84

Q755Q3              	100.00%		E1ZP93              	100.00%
Bootstrap support for Q755Q3 as seed ortholog is 100%.
Bootstrap support for E1ZP93 as seed ortholog is 100%.

Group of orthologs #1254. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 C.variabilis:84

Q75BZ2              	100.00%		E1ZTL0              	100.00%
Bootstrap support for Q75BZ2 as seed ortholog is 100%.
Bootstrap support for E1ZTL0 as seed ortholog is 100%.

Group of orthologs #1255. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.variabilis:83

Q752R3              	100.00%		E1Z6N2              	100.00%
Bootstrap support for Q752R3 as seed ortholog is 100%.
Bootstrap support for E1Z6N2 as seed ortholog is 100%.

Group of orthologs #1256. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.variabilis:83

Q757E9              	100.00%		E1ZCT7              	100.00%
Bootstrap support for Q757E9 as seed ortholog is 100%.
Bootstrap support for E1ZCT7 as seed ortholog is 100%.

Group of orthologs #1257. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.variabilis:83

Q74ZT8              	100.00%		E1ZK82              	100.00%
Bootstrap support for Q74ZT8 as seed ortholog is 100%.
Bootstrap support for E1ZK82 as seed ortholog is 100%.

Group of orthologs #1258. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.variabilis:83

Q75F63              	100.00%		E1ZBB6              	100.00%
Bootstrap support for Q75F63 as seed ortholog is 100%.
Bootstrap support for E1ZBB6 as seed ortholog is 100%.

Group of orthologs #1259. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.variabilis:83

Q750K0              	100.00%		E1ZNY6              	100.00%
Bootstrap support for Q750K0 as seed ortholog is 100%.
Bootstrap support for E1ZNY6 as seed ortholog is 100%.

Group of orthologs #1260. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.variabilis:83

Q75EH6              	100.00%		E1ZMP9              	100.00%
Bootstrap support for Q75EH6 as seed ortholog is 100%.
Bootstrap support for E1ZMP9 as seed ortholog is 100%.

Group of orthologs #1261. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q75ED5              	100.00%		E1Z325              	100.00%
                    	       		E1ZTA2              	9.26%
                    	       		E1ZBT5              	5.43%
                    	       		E1ZFW9              	5.31%
Bootstrap support for Q75ED5 as seed ortholog is 100%.
Bootstrap support for E1Z325 as seed ortholog is 100%.

Group of orthologs #1262. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q751Q4              	100.00%		E1ZFC0              	100.00%
Q753U7              	55.16%		E1ZBM1              	15.63%
Bootstrap support for Q751Q4 as seed ortholog is 100%.
Bootstrap support for E1ZFC0 as seed ortholog is 100%.

Group of orthologs #1263. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:23

Q751W5              	100.00%		E1Z9R9              	100.00%
                    	       		E1ZBI9              	11.72%
Bootstrap support for Q751W5 as seed ortholog is 100%.
Bootstrap support for E1Z9R9 as seed ortholog is 89%.

Group of orthologs #1264. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q74ZX8              	100.00%		E1ZRS5              	100.00%
                    	       		E1ZI88              	27.23%
Bootstrap support for Q74ZX8 as seed ortholog is 100%.
Bootstrap support for E1ZRS5 as seed ortholog is 100%.

Group of orthologs #1265. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:39 C.variabilis:82

Q757S0              	100.00%		E1ZAI7              	100.00%
Bootstrap support for Q757S0 as seed ortholog is 99%.
Bootstrap support for E1ZAI7 as seed ortholog is 100%.

Group of orthologs #1266. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:7

Q75E80              	100.00%		E1Z5H8              	100.00%
Bootstrap support for Q75E80 as seed ortholog is 100%.
Bootstrap support for E1Z5H8 as seed ortholog is 69%.
Alternative seed ortholog is E1ZL36 (7 bits away from this cluster)

Group of orthologs #1267. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q75BE9              	100.00%		E1ZBU4              	100.00%
Bootstrap support for Q75BE9 as seed ortholog is 100%.
Bootstrap support for E1ZBU4 as seed ortholog is 100%.

Group of orthologs #1268. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q74ZR8              	100.00%		E1ZMP1              	100.00%
Bootstrap support for Q74ZR8 as seed ortholog is 100%.
Bootstrap support for E1ZMP1 as seed ortholog is 100%.

Group of orthologs #1269. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q75BJ0              	100.00%		E1ZFV8              	100.00%
Bootstrap support for Q75BJ0 as seed ortholog is 100%.
Bootstrap support for E1ZFV8 as seed ortholog is 100%.

Group of orthologs #1270. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.variabilis:82

Q75AZ6              	100.00%		E1ZSE7              	100.00%
Bootstrap support for Q75AZ6 as seed ortholog is 100%.
Bootstrap support for E1ZSE7 as seed ortholog is 100%.

Group of orthologs #1271. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:81

Q759Q9              	100.00%		E1ZFI7              	100.00%
                    	       		E1Z6M5              	33.73%
Bootstrap support for Q759Q9 as seed ortholog is 100%.
Bootstrap support for E1ZFI7 as seed ortholog is 100%.

Group of orthologs #1272. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:24

Q750G6              	100.00%		E1Z1Y6              	100.00%
Bootstrap support for Q750G6 as seed ortholog is 100%.
Bootstrap support for E1Z1Y6 as seed ortholog is 86%.

Group of orthologs #1273. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:81

Q754L8              	100.00%		E1ZH27              	100.00%
Bootstrap support for Q754L8 as seed ortholog is 100%.
Bootstrap support for E1ZH27 as seed ortholog is 100%.

Group of orthologs #1274. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:81

Q75DT7              	100.00%		E1ZAP3              	100.00%
Bootstrap support for Q75DT7 as seed ortholog is 100%.
Bootstrap support for E1ZAP3 as seed ortholog is 100%.

Group of orthologs #1275. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:13 C.variabilis:81

Q755P5              	100.00%		E1ZIA9              	100.00%
Bootstrap support for Q755P5 as seed ortholog is 72%.
Alternative seed ortholog is Q75C25 (13 bits away from this cluster)
Bootstrap support for E1ZIA9 as seed ortholog is 100%.

Group of orthologs #1276. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:81

Q752I3              	100.00%		E1ZQN6              	100.00%
Bootstrap support for Q752I3 as seed ortholog is 100%.
Bootstrap support for E1ZQN6 as seed ortholog is 100%.

Group of orthologs #1277. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:81

Q757P5              	100.00%		E1ZMR8              	100.00%
Bootstrap support for Q757P5 as seed ortholog is 100%.
Bootstrap support for E1ZMR8 as seed ortholog is 100%.

Group of orthologs #1278. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 C.variabilis:81

Q75DJ1              	100.00%		E1ZQQ1              	100.00%
Bootstrap support for Q75DJ1 as seed ortholog is 100%.
Bootstrap support for E1ZQQ1 as seed ortholog is 100%.

Group of orthologs #1279. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:80

Q757B0              	100.00%		E1Z6T8              	100.00%
Bootstrap support for Q757B0 as seed ortholog is 100%.
Bootstrap support for E1Z6T8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:80

Q75EC5              	100.00%		E1ZAJ7              	100.00%
Bootstrap support for Q75EC5 as seed ortholog is 100%.
Bootstrap support for E1ZAJ7 as seed ortholog is 100%.

Group of orthologs #1281. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:80

Q758A0              	100.00%		E1ZIG5              	100.00%
Bootstrap support for Q758A0 as seed ortholog is 100%.
Bootstrap support for E1ZIG5 as seed ortholog is 100%.

Group of orthologs #1282. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:80

Q75DR5              	100.00%		E1ZIM0              	100.00%
Bootstrap support for Q75DR5 as seed ortholog is 100%.
Bootstrap support for E1ZIM0 as seed ortholog is 100%.

Group of orthologs #1283. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 C.variabilis:80

Q75B76              	100.00%		F2YGN6              	100.00%
Bootstrap support for Q75B76 as seed ortholog is 100%.
Bootstrap support for F2YGN6 as seed ortholog is 100%.

Group of orthologs #1284. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 C.variabilis:79

Q74ZE5              	100.00%		E1ZDY1              	100.00%
Bootstrap support for Q74ZE5 as seed ortholog is 100%.
Bootstrap support for E1ZDY1 as seed ortholog is 100%.

Group of orthologs #1285. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 C.variabilis:79

Q75C53              	100.00%		E1ZQA4              	100.00%
Bootstrap support for Q75C53 as seed ortholog is 100%.
Bootstrap support for E1ZQA4 as seed ortholog is 100%.

Group of orthologs #1286. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 C.variabilis:78

Q754Q2              	100.00%		E1ZBG8              	100.00%
Bootstrap support for Q754Q2 as seed ortholog is 100%.
Bootstrap support for E1ZBG8 as seed ortholog is 100%.

Group of orthologs #1287. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 C.variabilis:78

Q755N8              	100.00%		E1ZDV7              	100.00%
Bootstrap support for Q755N8 as seed ortholog is 100%.
Bootstrap support for E1ZDV7 as seed ortholog is 100%.

Group of orthologs #1288. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 C.variabilis:78

Q75AD0              	100.00%		E1ZR91              	100.00%
Bootstrap support for Q75AD0 as seed ortholog is 100%.
Bootstrap support for E1ZR91 as seed ortholog is 100%.

Group of orthologs #1289. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:18

Q759B8              	100.00%		E1ZDL4              	100.00%
Q75A69              	14.81%		E1ZDL5              	53.02%
                    	       		E1ZBI8              	6.36%
Bootstrap support for Q759B8 as seed ortholog is 100%.
Bootstrap support for E1ZDL4 as seed ortholog is 66%.
Alternative seed ortholog is E1ZE65 (18 bits away from this cluster)

Group of orthologs #1290. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q75DE2              	100.00%		E1Z9Z1              	100.00%
                    	       		E1Z4S7              	40.13%
                    	       		E1Z7Z7              	26.71%
Bootstrap support for Q75DE2 as seed ortholog is 100%.
Bootstrap support for E1Z9Z1 as seed ortholog is 100%.

Group of orthologs #1291. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q74Z19              	100.00%		E1Z9N9              	100.00%
Bootstrap support for Q74Z19 as seed ortholog is 100%.
Bootstrap support for E1Z9N9 as seed ortholog is 100%.

Group of orthologs #1292. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q753Y8              	100.00%		E1Z8M0              	100.00%
Bootstrap support for Q753Y8 as seed ortholog is 100%.
Bootstrap support for E1Z8M0 as seed ortholog is 100%.

Group of orthologs #1293. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q751G0              	100.00%		E1ZBX7              	100.00%
Bootstrap support for Q751G0 as seed ortholog is 100%.
Bootstrap support for E1ZBX7 as seed ortholog is 100%.

Group of orthologs #1294. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q758D8              	100.00%		E1Z8J8              	100.00%
Bootstrap support for Q758D8 as seed ortholog is 100%.
Bootstrap support for E1Z8J8 as seed ortholog is 100%.

Group of orthologs #1295. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:10 C.variabilis:77

Q753W3              	100.00%		E1ZCZ1              	100.00%
Bootstrap support for Q753W3 as seed ortholog is 39%.
Alternative seed ortholog is Q750E1 (10 bits away from this cluster)
Bootstrap support for E1ZCZ1 as seed ortholog is 100%.

Group of orthologs #1296. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q758K8              	100.00%		E1ZBG4              	100.00%
Bootstrap support for Q758K8 as seed ortholog is 100%.
Bootstrap support for E1ZBG4 as seed ortholog is 100%.

Group of orthologs #1297. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:8

Q759L2              	100.00%		E1ZAR4              	100.00%
Bootstrap support for Q759L2 as seed ortholog is 100%.
Bootstrap support for E1ZAR4 as seed ortholog is 59%.
Alternative seed ortholog is E1ZKB1 (8 bits away from this cluster)

Group of orthologs #1298. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q755A3              	100.00%		E1ZFC5              	100.00%
Bootstrap support for Q755A3 as seed ortholog is 100%.
Bootstrap support for E1ZFC5 as seed ortholog is 100%.

Group of orthologs #1299. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q751R7              	100.00%		E1ZJR4              	100.00%
Bootstrap support for Q751R7 as seed ortholog is 100%.
Bootstrap support for E1ZJR4 as seed ortholog is 100%.

Group of orthologs #1300. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q75AY2              	100.00%		E1ZD88              	100.00%
Bootstrap support for Q75AY2 as seed ortholog is 100%.
Bootstrap support for E1ZD88 as seed ortholog is 100%.

Group of orthologs #1301. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q75C47              	100.00%		E1ZCK0              	100.00%
Bootstrap support for Q75C47 as seed ortholog is 100%.
Bootstrap support for E1ZCK0 as seed ortholog is 100%.

Group of orthologs #1302. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q75BB9              	100.00%		E1ZFJ8              	100.00%
Bootstrap support for Q75BB9 as seed ortholog is 100%.
Bootstrap support for E1ZFJ8 as seed ortholog is 100%.

Group of orthologs #1303. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:10

Q74Z49              	100.00%		E1ZSB2              	100.00%
Bootstrap support for Q74Z49 as seed ortholog is 100%.
Bootstrap support for E1ZSB2 as seed ortholog is 61%.
Alternative seed ortholog is E1Z8H3 (10 bits away from this cluster)

Group of orthologs #1304. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q757M2              	100.00%		E1ZPC5              	100.00%
Bootstrap support for Q757M2 as seed ortholog is 100%.
Bootstrap support for E1ZPC5 as seed ortholog is 100%.

Group of orthologs #1305. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 C.variabilis:77

Q752P7              	100.00%		E1ZSY5              	100.00%
Bootstrap support for Q752P7 as seed ortholog is 100%.
Bootstrap support for E1ZSY5 as seed ortholog is 100%.

Group of orthologs #1306. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q752L7              	100.00%		E1Z6T1              	100.00%
Bootstrap support for Q752L7 as seed ortholog is 100%.
Bootstrap support for E1Z6T1 as seed ortholog is 100%.

Group of orthologs #1307. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q74ZM7              	100.00%		E1ZCP3              	100.00%
Bootstrap support for Q74ZM7 as seed ortholog is 100%.
Bootstrap support for E1ZCP3 as seed ortholog is 100%.

Group of orthologs #1308. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q752S6              	100.00%		E1ZFX8              	100.00%
Bootstrap support for Q752S6 as seed ortholog is 100%.
Bootstrap support for E1ZFX8 as seed ortholog is 100%.

Group of orthologs #1309. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q756Y9              	100.00%		E1ZMW9              	100.00%
Bootstrap support for Q756Y9 as seed ortholog is 100%.
Bootstrap support for E1ZMW9 as seed ortholog is 100%.

Group of orthologs #1310. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q75CG4              	100.00%		E1ZJ76              	100.00%
Bootstrap support for Q75CG4 as seed ortholog is 100%.
Bootstrap support for E1ZJ76 as seed ortholog is 100%.

Group of orthologs #1311. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q756Z4              	100.00%		E1ZRT3              	100.00%
Bootstrap support for Q756Z4 as seed ortholog is 100%.
Bootstrap support for E1ZRT3 as seed ortholog is 100%.

Group of orthologs #1312. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.variabilis:76

Q759I0              	100.00%		E1ZSZ0              	100.00%
Bootstrap support for Q759I0 as seed ortholog is 100%.
Bootstrap support for E1ZSZ0 as seed ortholog is 100%.

Group of orthologs #1313. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 C.variabilis:75

Q75AQ0              	100.00%		E1ZAW7              	100.00%
Bootstrap support for Q75AQ0 as seed ortholog is 100%.
Bootstrap support for E1ZAW7 as seed ortholog is 100%.

Group of orthologs #1314. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q752X8              	100.00%		E1Z220              	100.00%
Bootstrap support for Q752X8 as seed ortholog is 100%.
Bootstrap support for E1Z220 as seed ortholog is 100%.

Group of orthologs #1315. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q750J3              	100.00%		E1Z8E2              	100.00%
Bootstrap support for Q750J3 as seed ortholog is 100%.
Bootstrap support for E1Z8E2 as seed ortholog is 100%.

Group of orthologs #1316. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:23 C.variabilis:31

Q755C3              	100.00%		E1Z7M4              	100.00%
Bootstrap support for Q755C3 as seed ortholog is 61%.
Alternative seed ortholog is Q758I7 (23 bits away from this cluster)
Bootstrap support for E1Z7M4 as seed ortholog is 84%.

Group of orthologs #1317. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q74Z52              	100.00%		E1ZC57              	100.00%
Bootstrap support for Q74Z52 as seed ortholog is 100%.
Bootstrap support for E1ZC57 as seed ortholog is 100%.

Group of orthologs #1318. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q75AY0              	100.00%		E1Z4B3              	100.00%
Bootstrap support for Q75AY0 as seed ortholog is 100%.
Bootstrap support for E1Z4B3 as seed ortholog is 100%.

Group of orthologs #1319. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q75CA1              	100.00%		E1ZC75              	100.00%
Bootstrap support for Q75CA1 as seed ortholog is 100%.
Bootstrap support for E1ZC75 as seed ortholog is 100%.

Group of orthologs #1320. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:32

Q755T6              	100.00%		E1ZID3              	100.00%
Bootstrap support for Q755T6 as seed ortholog is 100%.
Bootstrap support for E1ZID3 as seed ortholog is 90%.

Group of orthologs #1321. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q75EE0              	100.00%		E1ZBV5              	100.00%
Bootstrap support for Q75EE0 as seed ortholog is 100%.
Bootstrap support for E1ZBV5 as seed ortholog is 100%.

Group of orthologs #1322. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.variabilis:74

Q75F05              	100.00%		E1ZLM2              	100.00%
Bootstrap support for Q75F05 as seed ortholog is 100%.
Bootstrap support for E1ZLM2 as seed ortholog is 100%.

Group of orthologs #1323. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 C.variabilis:73

Q758B4              	100.00%		E1Z9T9              	100.00%
                    	       		E1ZJX9              	6.51%
Bootstrap support for Q758B4 as seed ortholog is 100%.
Bootstrap support for E1Z9T9 as seed ortholog is 100%.

Group of orthologs #1324. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 C.variabilis:3

Q754E4              	100.00%		E1ZLY6              	100.00%
                    	       		E1Z314              	20.98%
Bootstrap support for Q754E4 as seed ortholog is 100%.
Bootstrap support for E1ZLY6 as seed ortholog is 39%.
Alternative seed ortholog is E1Z3Y7 (3 bits away from this cluster)

Group of orthologs #1325. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 C.variabilis:73

Q74ZD3              	100.00%		E1Z582              	100.00%
Bootstrap support for Q74ZD3 as seed ortholog is 100%.
Bootstrap support for E1Z582 as seed ortholog is 100%.

Group of orthologs #1326. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 C.variabilis:73

Q75AU6              	100.00%		E1Z5N1              	100.00%
Bootstrap support for Q75AU6 as seed ortholog is 100%.
Bootstrap support for E1Z5N1 as seed ortholog is 100%.

Group of orthologs #1327. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 C.variabilis:73

Q74ZN4              	100.00%		E1ZME4              	100.00%
Bootstrap support for Q74ZN4 as seed ortholog is 100%.
Bootstrap support for E1ZME4 as seed ortholog is 100%.

Group of orthologs #1328. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 C.variabilis:73

Q75E57              	100.00%		E1ZR18              	100.00%
Bootstrap support for Q75E57 as seed ortholog is 100%.
Bootstrap support for E1ZR18 as seed ortholog is 100%.

Group of orthologs #1329. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:13

Q75BV0              	100.00%		E1ZGY4              	100.00%
Q75CX6              	35.89%		E1ZF23              	60.21%
Q75DB2              	35.41%		E1ZIY1              	7.37%
Q75CX5              	34.69%		E1Z9R5              	7.16%
Q75DB1              	33.97%		E1ZFR4              	6.11%
Bootstrap support for Q75BV0 as seed ortholog is 100%.
Bootstrap support for E1ZGY4 as seed ortholog is 71%.
Alternative seed ortholog is E1ZDK8 (13 bits away from this cluster)

Group of orthologs #1330. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q752N1              	100.00%		E1Z808              	100.00%
                    	       		E1ZS24              	20.48%
                    	       		E1ZPR8              	5.51%
                    	       		E1Z8U3              	5.08%
Bootstrap support for Q752N1 as seed ortholog is 100%.
Bootstrap support for E1Z808 as seed ortholog is 100%.

Group of orthologs #1331. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75B89              	100.00%		E1Z5B2              	100.00%
Bootstrap support for Q75B89 as seed ortholog is 100%.
Bootstrap support for E1Z5B2 as seed ortholog is 100%.

Group of orthologs #1332. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75BZ7              	100.00%		E1Z7P6              	100.00%
Bootstrap support for Q75BZ7 as seed ortholog is 100%.
Bootstrap support for E1Z7P6 as seed ortholog is 100%.

Group of orthologs #1333. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75B24              	100.00%		E1ZAA2              	100.00%
Bootstrap support for Q75B24 as seed ortholog is 100%.
Bootstrap support for E1ZAA2 as seed ortholog is 100%.

Group of orthologs #1334. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75AA9              	100.00%		E1ZBH0              	100.00%
Bootstrap support for Q75AA9 as seed ortholog is 100%.
Bootstrap support for E1ZBH0 as seed ortholog is 100%.

Group of orthologs #1335. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q754Z9              	100.00%		E1ZM80              	100.00%
Bootstrap support for Q754Z9 as seed ortholog is 100%.
Bootstrap support for E1ZM80 as seed ortholog is 100%.

Group of orthologs #1336. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75CN1              	100.00%		E1ZGH1              	100.00%
Bootstrap support for Q75CN1 as seed ortholog is 100%.
Bootstrap support for E1ZGH1 as seed ortholog is 100%.

Group of orthologs #1337. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q750Y9              	100.00%		E1ZRJ5              	100.00%
Bootstrap support for Q750Y9 as seed ortholog is 100%.
Bootstrap support for E1ZRJ5 as seed ortholog is 100%.

Group of orthologs #1338. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:3 C.variabilis:72

Q75AV1              	100.00%		E1ZKB0              	100.00%
Bootstrap support for Q75AV1 as seed ortholog is 45%.
Alternative seed ortholog is Q757J7 (3 bits away from this cluster)
Bootstrap support for E1ZKB0 as seed ortholog is 100%.

Group of orthologs #1339. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75D45              	100.00%		E1ZJ96              	100.00%
Bootstrap support for Q75D45 as seed ortholog is 100%.
Bootstrap support for E1ZJ96 as seed ortholog is 100%.

Group of orthologs #1340. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.variabilis:72

Q75D61              	100.00%		E1ZJA6              	100.00%
Bootstrap support for Q75D61 as seed ortholog is 100%.
Bootstrap support for E1ZJA6 as seed ortholog is 100%.

Group of orthologs #1341. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q757L1              	100.00%		E1ZHS9              	100.00%
                    	       		E1Z1Z4              	32.39%
Bootstrap support for Q757L1 as seed ortholog is 100%.
Bootstrap support for E1ZHS9 as seed ortholog is 100%.

Group of orthologs #1342. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:2

Q751I2              	100.00%		E1Z7R8              	100.00%
Bootstrap support for Q751I2 as seed ortholog is 100%.
Bootstrap support for E1Z7R8 as seed ortholog is 54%.
Alternative seed ortholog is E1ZEW3 (2 bits away from this cluster)

Group of orthologs #1343. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q756P9              	100.00%		E1Z488              	100.00%
Bootstrap support for Q756P9 as seed ortholog is 100%.
Bootstrap support for E1Z488 as seed ortholog is 100%.

Group of orthologs #1344. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:6

Q755M6              	100.00%		E1Z928              	100.00%
Bootstrap support for Q755M6 as seed ortholog is 100%.
Bootstrap support for E1Z928 as seed ortholog is 62%.
Alternative seed ortholog is E1Z207 (6 bits away from this cluster)

Group of orthologs #1345. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75EG1              	100.00%		E1Z1Y0              	100.00%
Bootstrap support for Q75EG1 as seed ortholog is 100%.
Bootstrap support for E1Z1Y0 as seed ortholog is 100%.

Group of orthologs #1346. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q754A8              	100.00%		E1ZCQ8              	100.00%
Bootstrap support for Q754A8 as seed ortholog is 100%.
Bootstrap support for E1ZCQ8 as seed ortholog is 100%.

Group of orthologs #1347. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q74ZN9              	100.00%		E1ZPX4              	100.00%
Bootstrap support for Q74ZN9 as seed ortholog is 100%.
Bootstrap support for E1ZPX4 as seed ortholog is 100%.

Group of orthologs #1348. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75F76              	100.00%		E1ZDG6              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for E1ZDG6 as seed ortholog is 100%.

Group of orthologs #1349. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75EQ1              	100.00%		E1ZG90              	100.00%
Bootstrap support for Q75EQ1 as seed ortholog is 100%.
Bootstrap support for E1ZG90 as seed ortholog is 100%.

Group of orthologs #1350. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75CT7              	100.00%		E1ZQQ4              	100.00%
Bootstrap support for Q75CT7 as seed ortholog is 100%.
Bootstrap support for E1ZQQ4 as seed ortholog is 100%.

Group of orthologs #1351. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75AZ8              	100.00%		E1ZT97              	100.00%
Bootstrap support for Q75AZ8 as seed ortholog is 100%.
Bootstrap support for E1ZT97 as seed ortholog is 100%.

Group of orthologs #1352. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75CY8              	100.00%		E1ZRN4              	100.00%
Bootstrap support for Q75CY8 as seed ortholog is 100%.
Bootstrap support for E1ZRN4 as seed ortholog is 100%.

Group of orthologs #1353. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 C.variabilis:71

Q75F19              	100.00%		E1ZS05              	100.00%
Bootstrap support for Q75F19 as seed ortholog is 100%.
Bootstrap support for E1ZS05 as seed ortholog is 100%.

Group of orthologs #1354. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 C.variabilis:70

Q75DL2              	100.00%		E1Z922              	100.00%
Q75AX6              	7.57%		
Bootstrap support for Q75DL2 as seed ortholog is 100%.
Bootstrap support for E1Z922 as seed ortholog is 100%.

Group of orthologs #1355. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 C.variabilis:70

Q751R1              	100.00%		E1Z4G6              	100.00%
Bootstrap support for Q751R1 as seed ortholog is 100%.
Bootstrap support for E1Z4G6 as seed ortholog is 100%.

Group of orthologs #1356. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 C.variabilis:11

Q75CQ0              	100.00%		E1ZFC3              	100.00%
Bootstrap support for Q75CQ0 as seed ortholog is 100%.
Bootstrap support for E1ZFC3 as seed ortholog is 71%.
Alternative seed ortholog is E1ZNW6 (11 bits away from this cluster)

Group of orthologs #1357. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 C.variabilis:70

Q758M0              	100.00%		E1ZSL9              	100.00%
Bootstrap support for Q758M0 as seed ortholog is 100%.
Bootstrap support for E1ZSL9 as seed ortholog is 100%.

Group of orthologs #1358. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:10

Q75AR2              	100.00%		E1ZEP1              	100.00%
                    	       		E1Z4V7              	10.67%
                    	       		E1ZBS0              	10.51%
Bootstrap support for Q75AR2 as seed ortholog is 100%.
Bootstrap support for E1ZEP1 as seed ortholog is 65%.
Alternative seed ortholog is E1Z657 (10 bits away from this cluster)

Group of orthologs #1359. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q751X8              	100.00%		E1Z6B2              	100.00%
                    	       		E1ZP72              	8.77%
Bootstrap support for Q751X8 as seed ortholog is 100%.
Bootstrap support for E1Z6B2 as seed ortholog is 100%.

Group of orthologs #1360. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q751Y2              	100.00%		E1ZP38              	100.00%
                    	       		E1Z8S6              	21.30%
Bootstrap support for Q751Y2 as seed ortholog is 100%.
Bootstrap support for E1ZP38 as seed ortholog is 100%.

Group of orthologs #1361. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q75F12              	100.00%		E1ZDR4              	100.00%
                    	       		E1ZK09              	22.41%
Bootstrap support for Q75F12 as seed ortholog is 100%.
Bootstrap support for E1ZDR4 as seed ortholog is 100%.

Group of orthologs #1362. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q752J8              	100.00%		E1ZI13              	100.00%
Bootstrap support for Q752J8 as seed ortholog is 100%.
Bootstrap support for E1ZI13 as seed ortholog is 100%.

Group of orthologs #1363. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q758M9              	100.00%		E1ZEQ8              	100.00%
Bootstrap support for Q758M9 as seed ortholog is 100%.
Bootstrap support for E1ZEQ8 as seed ortholog is 100%.

Group of orthologs #1364. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q75BK6              	100.00%		E1ZCI6              	100.00%
Bootstrap support for Q75BK6 as seed ortholog is 100%.
Bootstrap support for E1ZCI6 as seed ortholog is 100%.

Group of orthologs #1365. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q75A02              	100.00%		E1ZHH5              	100.00%
Bootstrap support for Q75A02 as seed ortholog is 100%.
Bootstrap support for E1ZHH5 as seed ortholog is 100%.

Group of orthologs #1366. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 C.variabilis:69

Q759N5              	100.00%		E1ZND6              	100.00%
Bootstrap support for Q759N5 as seed ortholog is 100%.
Bootstrap support for E1ZND6 as seed ortholog is 100%.

Group of orthologs #1367. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:17 C.variabilis:69

Q759T8              	100.00%		E1ZNJ9              	100.00%
Bootstrap support for Q759T8 as seed ortholog is 75%.
Bootstrap support for E1ZNJ9 as seed ortholog is 100%.

Group of orthologs #1368. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:68

Q759K6              	100.00%		E1ZCG4              	100.00%
                    	       		E1ZN57              	14.09%
Bootstrap support for Q759K6 as seed ortholog is 100%.
Bootstrap support for E1ZCG4 as seed ortholog is 100%.

Group of orthologs #1369. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:68

Q751F1              	100.00%		E1Z286              	100.00%
Bootstrap support for Q751F1 as seed ortholog is 100%.
Bootstrap support for E1Z286 as seed ortholog is 100%.

Group of orthologs #1370. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:68

Q752D7              	100.00%		E1Z1Y7              	100.00%
Bootstrap support for Q752D7 as seed ortholog is 100%.
Bootstrap support for E1Z1Y7 as seed ortholog is 100%.

Group of orthologs #1371. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 C.variabilis:68

Q75DM6              	100.00%		E1Z2H5              	100.00%
Bootstrap support for Q75DM6 as seed ortholog is 100%.
Bootstrap support for E1Z2H5 as seed ortholog is 100%.

Group of orthologs #1372. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:1 C.variabilis:68

Q75BL9              	100.00%		E1ZQX0              	100.00%
Bootstrap support for Q75BL9 as seed ortholog is 51%.
Alternative seed ortholog is Q756L8 (1 bits away from this cluster)
Bootstrap support for E1ZQX0 as seed ortholog is 100%.

Group of orthologs #1373. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 C.variabilis:67

Q751W7              	100.00%		E1Z2N0              	100.00%
Bootstrap support for Q751W7 as seed ortholog is 100%.
Bootstrap support for E1Z2N0 as seed ortholog is 100%.

Group of orthologs #1374. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 C.variabilis:67

Q75A04              	100.00%		E1Z437              	100.00%
Bootstrap support for Q75A04 as seed ortholog is 100%.
Bootstrap support for E1Z437 as seed ortholog is 100%.

Group of orthologs #1375. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 C.variabilis:67

Q756I4              	100.00%		E1Z7M7              	100.00%
Bootstrap support for Q756I4 as seed ortholog is 100%.
Bootstrap support for E1Z7M7 as seed ortholog is 100%.

Group of orthologs #1376. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 C.variabilis:67

Q754J4              	100.00%		E1ZB95              	100.00%
Bootstrap support for Q754J4 as seed ortholog is 100%.
Bootstrap support for E1ZB95 as seed ortholog is 100%.

Group of orthologs #1377. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 C.variabilis:67

Q752E1              	100.00%		E1ZJP2              	100.00%
Bootstrap support for Q752E1 as seed ortholog is 100%.
Bootstrap support for E1ZJP2 as seed ortholog is 100%.

Group of orthologs #1378. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 C.variabilis:67

Q75AZ2              	100.00%		E1ZFM6              	100.00%
Bootstrap support for Q75AZ2 as seed ortholog is 100%.
Bootstrap support for E1ZFM6 as seed ortholog is 100%.

Group of orthologs #1379. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q753Q9              	100.00%		E1ZB59              	100.00%
                    	       		E1ZN46              	23.33%
                    	       		E1ZPW6              	8.23%
                    	       		E1ZHI8              	5.58%
                    	       		E1ZFX5              	5.49%
                    	       		E1ZKF1              	5.03%
Bootstrap support for Q753Q9 as seed ortholog is 100%.
Bootstrap support for E1ZB59 as seed ortholog is 100%.

Group of orthologs #1380. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q75A35              	100.00%		E1ZBS3              	100.00%
                    	       		E1ZSD3              	21.65%
Bootstrap support for Q75A35 as seed ortholog is 100%.
Bootstrap support for E1ZBS3 as seed ortholog is 100%.

Group of orthologs #1381. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q74ZB5              	100.00%		E1ZNV3              	100.00%
                    	       		E1ZNV0              	16.35%
Bootstrap support for Q74ZB5 as seed ortholog is 100%.
Bootstrap support for E1ZNV3 as seed ortholog is 100%.

Group of orthologs #1382. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:22

Q751D5              	100.00%		E1Z997              	100.00%
Bootstrap support for Q751D5 as seed ortholog is 100%.
Bootstrap support for E1Z997 as seed ortholog is 86%.

Group of orthologs #1383. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q75AM3              	100.00%		E1Z323              	100.00%
Bootstrap support for Q75AM3 as seed ortholog is 100%.
Bootstrap support for E1Z323 as seed ortholog is 100%.

Group of orthologs #1384. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q754B9              	100.00%		E1ZEE4              	100.00%
Bootstrap support for Q754B9 as seed ortholog is 100%.
Bootstrap support for E1ZEE4 as seed ortholog is 100%.

Group of orthologs #1385. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q750D9              	100.00%		E1ZHE8              	100.00%
Bootstrap support for Q750D9 as seed ortholog is 100%.
Bootstrap support for E1ZHE8 as seed ortholog is 100%.

Group of orthologs #1386. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q753R2              	100.00%		E1ZGW9              	100.00%
Bootstrap support for Q753R2 as seed ortholog is 100%.
Bootstrap support for E1ZGW9 as seed ortholog is 100%.

Group of orthologs #1387. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q754F8              	100.00%		E1ZKN4              	100.00%
Bootstrap support for Q754F8 as seed ortholog is 100%.
Bootstrap support for E1ZKN4 as seed ortholog is 100%.

Group of orthologs #1388. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:23 C.variabilis:66

Q75C54              	100.00%		E1ZI68              	100.00%
Bootstrap support for Q75C54 as seed ortholog is 79%.
Bootstrap support for E1ZI68 as seed ortholog is 100%.

Group of orthologs #1389. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q75CR5              	100.00%		E1ZPM0              	100.00%
Bootstrap support for Q75CR5 as seed ortholog is 100%.
Bootstrap support for E1ZPM0 as seed ortholog is 100%.

Group of orthologs #1390. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q758Y1              	100.00%		E1ZTL3              	100.00%
Bootstrap support for Q758Y1 as seed ortholog is 100%.
Bootstrap support for E1ZTL3 as seed ortholog is 100%.

Group of orthologs #1391. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 C.variabilis:66

Q75CT5              	100.00%		E1ZS09              	100.00%
Bootstrap support for Q75CT5 as seed ortholog is 100%.
Bootstrap support for E1ZS09 as seed ortholog is 100%.

Group of orthologs #1392. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 C.variabilis:65

Q752B7              	100.00%		E1ZCS1              	100.00%
Bootstrap support for Q752B7 as seed ortholog is 100%.
Bootstrap support for E1ZCS1 as seed ortholog is 100%.

Group of orthologs #1393. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 C.variabilis:65

Q75F94              	100.00%		E1Z4G3              	100.00%
Bootstrap support for Q75F94 as seed ortholog is 100%.
Bootstrap support for E1Z4G3 as seed ortholog is 100%.

Group of orthologs #1394. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 C.variabilis:65

Q74Z66              	100.00%		E1ZJ68              	100.00%
Bootstrap support for Q74Z66 as seed ortholog is 100%.
Bootstrap support for E1ZJ68 as seed ortholog is 100%.

Group of orthologs #1395. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 C.variabilis:65

Q750N0              	100.00%		E1ZIU7              	100.00%
Bootstrap support for Q750N0 as seed ortholog is 100%.
Bootstrap support for E1ZIU7 as seed ortholog is 100%.

Group of orthologs #1396. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 C.variabilis:64

Q750U4              	100.00%		E1ZCN1              	100.00%
Bootstrap support for Q750U4 as seed ortholog is 100%.
Bootstrap support for E1ZCN1 as seed ortholog is 100%.

Group of orthologs #1397. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:2 C.variabilis:64

Q75DM1              	100.00%		E1Z3S2              	100.00%
Bootstrap support for Q75DM1 as seed ortholog is 49%.
Alternative seed ortholog is Q750R0 (2 bits away from this cluster)
Bootstrap support for E1Z3S2 as seed ortholog is 100%.

Group of orthologs #1398. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 C.variabilis:64

Q75E14              	100.00%		E1ZB77              	100.00%
Bootstrap support for Q75E14 as seed ortholog is 100%.
Bootstrap support for E1ZB77 as seed ortholog is 100%.

Group of orthologs #1399. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 C.variabilis:64

Q75EE2              	100.00%		E1ZMY3              	100.00%
Bootstrap support for Q75EE2 as seed ortholog is 100%.
Bootstrap support for E1ZMY3 as seed ortholog is 100%.

Group of orthologs #1400. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:22 C.variabilis:64

Q759W7              	100.00%		E1ZSX3              	100.00%
Bootstrap support for Q759W7 as seed ortholog is 90%.
Bootstrap support for E1ZSX3 as seed ortholog is 100%.

Group of orthologs #1401. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 C.variabilis:63

Q75CY5              	100.00%		E1Z3L0              	100.00%
Bootstrap support for Q75CY5 as seed ortholog is 100%.
Bootstrap support for E1Z3L0 as seed ortholog is 100%.

Group of orthologs #1402. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:8 C.variabilis:63

Q75C42              	100.00%		E1Z9L0              	100.00%
Bootstrap support for Q75C42 as seed ortholog is 62%.
Alternative seed ortholog is Q75BG7 (8 bits away from this cluster)
Bootstrap support for E1Z9L0 as seed ortholog is 100%.

Group of orthologs #1403. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:62

Q755Y7              	100.00%		E1ZHH6              	100.00%
Q75C65              	20.91%		E1ZQA7              	19.30%
                    	       		E1ZQA6              	17.39%
                    	       		E1Z5C2              	15.98%
                    	       		E1ZQA8              	15.38%
                    	       		E1ZC02              	14.27%
                    	       		E1ZJI2              	12.26%
Bootstrap support for Q755Y7 as seed ortholog is 100%.
Bootstrap support for E1ZHH6 as seed ortholog is 100%.

Group of orthologs #1404. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:62

Q758Q7              	100.00%		E1ZHU2              	100.00%
                    	       		E1Z1Z3              	23.02%
Bootstrap support for Q758Q7 as seed ortholog is 100%.
Bootstrap support for E1ZHU2 as seed ortholog is 100%.

Group of orthologs #1405. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:62

Q75CH5              	100.00%		E1Z1X7              	100.00%
Bootstrap support for Q75CH5 as seed ortholog is 100%.
Bootstrap support for E1Z1X7 as seed ortholog is 100%.

Group of orthologs #1406. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:62

Q75B96              	100.00%		E1ZCN0              	100.00%
Bootstrap support for Q75B96 as seed ortholog is 100%.
Bootstrap support for E1ZCN0 as seed ortholog is 100%.

Group of orthologs #1407. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:62

Q74Z04              	100.00%		E1ZSJ1              	100.00%
Bootstrap support for Q74Z04 as seed ortholog is 100%.
Bootstrap support for E1ZSJ1 as seed ortholog is 100%.

Group of orthologs #1408. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.variabilis:62

Q75EV1              	100.00%		E1ZMI5              	100.00%
Bootstrap support for Q75EV1 as seed ortholog is 100%.
Bootstrap support for E1ZMI5 as seed ortholog is 100%.

Group of orthologs #1409. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

D8FGB7              	100.00%		E1Z6D7              	100.00%
                    	       		E1ZDX4              	5.08%
Bootstrap support for D8FGB7 as seed ortholog is 100%.
Bootstrap support for E1Z6D7 as seed ortholog is 100%.

Group of orthologs #1410. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q758N2              	100.00%		E1Z4Y5              	100.00%
Bootstrap support for Q758N2 as seed ortholog is 100%.
Bootstrap support for E1Z4Y5 as seed ortholog is 100%.

Group of orthologs #1411. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q75BR7              	100.00%		E1Z6I1              	100.00%
Bootstrap support for Q75BR7 as seed ortholog is 100%.
Bootstrap support for E1Z6I1 as seed ortholog is 100%.

Group of orthologs #1412. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

D8FGG3              	100.00%		E1ZI01              	100.00%
Bootstrap support for D8FGG3 as seed ortholog is 100%.
Bootstrap support for E1ZI01 as seed ortholog is 100%.

Group of orthologs #1413. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q74ZP1              	100.00%		E1ZJY2              	100.00%
Bootstrap support for Q74ZP1 as seed ortholog is 100%.
Bootstrap support for E1ZJY2 as seed ortholog is 100%.

Group of orthologs #1414. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q752P8              	100.00%		E1ZKJ3              	100.00%
Bootstrap support for Q752P8 as seed ortholog is 100%.
Bootstrap support for E1ZKJ3 as seed ortholog is 100%.

Group of orthologs #1415. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q751F9              	100.00%		E1ZLM7              	100.00%
Bootstrap support for Q751F9 as seed ortholog is 100%.
Bootstrap support for E1ZLM7 as seed ortholog is 100%.

Group of orthologs #1416. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q75BR5              	100.00%		E1ZEX5              	100.00%
Bootstrap support for Q75BR5 as seed ortholog is 100%.
Bootstrap support for E1ZEX5 as seed ortholog is 100%.

Group of orthologs #1417. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:3

Q75BW5              	100.00%		E1ZK04              	100.00%
Bootstrap support for Q75BW5 as seed ortholog is 100%.
Bootstrap support for E1ZK04 as seed ortholog is 55%.
Alternative seed ortholog is E1ZRD8 (3 bits away from this cluster)

Group of orthologs #1418. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 C.variabilis:61

Q75DX1              	100.00%		E1ZKY4              	100.00%
Bootstrap support for Q75DX1 as seed ortholog is 100%.
Bootstrap support for E1ZKY4 as seed ortholog is 100%.

Group of orthologs #1419. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:60

D8FGG9              	100.00%		E1ZGW6              	100.00%
Q755Q9              	100.00%		E1ZDC0              	100.00%
Q75BF9              	100.00%		
Q752Z6              	77.43%		
Q75F56              	36.36%		
Q752E3              	17.48%		
Q755Y5              	14.24%		
Bootstrap support for D8FGG9 as seed ortholog is 100%.
Bootstrap support for Q755Q9 as seed ortholog is 100%.
Bootstrap support for Q75BF9 as seed ortholog is 100%.
Bootstrap support for E1ZGW6 as seed ortholog is 100%.
Bootstrap support for E1ZDC0 as seed ortholog is 100%.

Group of orthologs #1420. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:60

Q754K6              	100.00%		E1Z826              	100.00%
                    	       		E1Z4W5              	18.53%
                    	       		E1ZL75              	18.03%
Bootstrap support for Q754K6 as seed ortholog is 100%.
Bootstrap support for E1Z826 as seed ortholog is 100%.

Group of orthologs #1421. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:60

Q75BJ4              	100.00%		E1Z449              	100.00%
Bootstrap support for Q75BJ4 as seed ortholog is 100%.
Bootstrap support for E1Z449 as seed ortholog is 100%.

Group of orthologs #1422. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:60

Q75AB3              	100.00%		E1ZED1              	100.00%
Bootstrap support for Q75AB3 as seed ortholog is 100%.
Bootstrap support for E1ZED1 as seed ortholog is 100%.

Group of orthologs #1423. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:60

Q75F04              	100.00%		E1ZD40              	100.00%
Bootstrap support for Q75F04 as seed ortholog is 100%.
Bootstrap support for E1ZD40 as seed ortholog is 100%.

Group of orthologs #1424. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 C.variabilis:60

Q752R0              	100.00%		E1ZRI7              	100.00%
Bootstrap support for Q752R0 as seed ortholog is 100%.
Bootstrap support for E1ZRI7 as seed ortholog is 100%.

Group of orthologs #1425. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:59

Q752S2              	100.00%		E1Z998              	100.00%
Bootstrap support for Q752S2 as seed ortholog is 100%.
Bootstrap support for E1Z998 as seed ortholog is 100%.

Group of orthologs #1426. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:59

Q752W4              	100.00%		E1ZCM4              	100.00%
Bootstrap support for Q752W4 as seed ortholog is 100%.
Bootstrap support for E1ZCM4 as seed ortholog is 100%.

Group of orthologs #1427. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:59

Q757F3              	100.00%		E1ZLW4              	100.00%
Bootstrap support for Q757F3 as seed ortholog is 100%.
Bootstrap support for E1ZLW4 as seed ortholog is 100%.

Group of orthologs #1428. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:59

Q75DX8              	100.00%		E1ZGI1              	100.00%
Bootstrap support for Q75DX8 as seed ortholog is 100%.
Bootstrap support for E1ZGI1 as seed ortholog is 100%.

Group of orthologs #1429. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 C.variabilis:59

Q755U6              	100.00%		E1ZQ11              	100.00%
Bootstrap support for Q755U6 as seed ortholog is 100%.
Bootstrap support for E1ZQ11 as seed ortholog is 100%.

Group of orthologs #1430. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:15 C.variabilis:58

Q755Q7              	100.00%		E1Z8C1              	100.00%
Bootstrap support for Q755Q7 as seed ortholog is 78%.
Bootstrap support for E1Z8C1 as seed ortholog is 100%.

Group of orthologs #1431. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 C.variabilis:58

Q75D26              	100.00%		E1Z497              	100.00%
Bootstrap support for Q75D26 as seed ortholog is 100%.
Bootstrap support for E1Z497 as seed ortholog is 100%.

Group of orthologs #1432. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 C.variabilis:58

Q759B5              	100.00%		E1ZAR5              	100.00%
Bootstrap support for Q759B5 as seed ortholog is 100%.
Bootstrap support for E1ZAR5 as seed ortholog is 100%.

Group of orthologs #1433. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 C.variabilis:58

Q753S7              	100.00%		E1ZML9              	100.00%
Bootstrap support for Q753S7 as seed ortholog is 100%.
Bootstrap support for E1ZML9 as seed ortholog is 100%.

Group of orthologs #1434. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 C.variabilis:58

Q75BA0              	100.00%		E1ZI08              	100.00%
Bootstrap support for Q75BA0 as seed ortholog is 100%.
Bootstrap support for E1ZI08 as seed ortholog is 100%.

Group of orthologs #1435. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 C.variabilis:58

Q756B1              	100.00%		E1ZP32              	100.00%
Bootstrap support for Q756B1 as seed ortholog is 100%.
Bootstrap support for E1ZP32 as seed ortholog is 100%.

Group of orthologs #1436. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q750Y2              	100.00%		E1Z3U7              	100.00%
Bootstrap support for Q750Y2 as seed ortholog is 100%.
Bootstrap support for E1Z3U7 as seed ortholog is 100%.

Group of orthologs #1437. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q759U5              	100.00%		E1ZCY2              	100.00%
Bootstrap support for Q759U5 as seed ortholog is 100%.
Bootstrap support for E1ZCY2 as seed ortholog is 100%.

Group of orthologs #1438. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q752D8              	100.00%		E1ZLP0              	100.00%
Bootstrap support for Q752D8 as seed ortholog is 100%.
Bootstrap support for E1ZLP0 as seed ortholog is 100%.

Group of orthologs #1439. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q75AC1              	100.00%		E1ZGR3              	100.00%
Bootstrap support for Q75AC1 as seed ortholog is 100%.
Bootstrap support for E1ZGR3 as seed ortholog is 100%.

Group of orthologs #1440. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q758S3              	100.00%		E1ZK87              	100.00%
Bootstrap support for Q758S3 as seed ortholog is 100%.
Bootstrap support for E1ZK87 as seed ortholog is 100%.

Group of orthologs #1441. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q75DJ8              	100.00%		E1ZGE9              	100.00%
Bootstrap support for Q75DJ8 as seed ortholog is 100%.
Bootstrap support for E1ZGE9 as seed ortholog is 100%.

Group of orthologs #1442. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q75A56              	100.00%		E1ZMU9              	100.00%
Bootstrap support for Q75A56 as seed ortholog is 100%.
Bootstrap support for E1ZMU9 as seed ortholog is 100%.

Group of orthologs #1443. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q751D0              	100.00%		F2YGN4              	100.00%
Bootstrap support for Q751D0 as seed ortholog is 100%.
Bootstrap support for F2YGN4 as seed ortholog is 100%.

Group of orthologs #1444. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.variabilis:57

Q75EA2              	100.00%		E1ZTM7              	100.00%
Bootstrap support for Q75EA2 as seed ortholog is 100%.
Bootstrap support for E1ZTM7 as seed ortholog is 100%.

Group of orthologs #1445. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q751R3              	100.00%		E1Z374              	100.00%
Bootstrap support for Q751R3 as seed ortholog is 100%.
Bootstrap support for E1Z374 as seed ortholog is 100%.

Group of orthologs #1446. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q754P6              	100.00%		E1Z3T6              	100.00%
Bootstrap support for Q754P6 as seed ortholog is 100%.
Bootstrap support for E1Z3T6 as seed ortholog is 100%.

Group of orthologs #1447. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q753I0              	100.00%		E1Z5A6              	100.00%
Bootstrap support for Q753I0 as seed ortholog is 100%.
Bootstrap support for E1Z5A6 as seed ortholog is 100%.

Group of orthologs #1448. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q75AX7              	100.00%		E1Z3B6              	100.00%
Bootstrap support for Q75AX7 as seed ortholog is 100%.
Bootstrap support for E1Z3B6 as seed ortholog is 100%.

Group of orthologs #1449. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q755V5              	100.00%		E1Z957              	100.00%
Bootstrap support for Q755V5 as seed ortholog is 100%.
Bootstrap support for E1Z957 as seed ortholog is 100%.

Group of orthologs #1450. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q75CN8              	100.00%		E1Z8P6              	100.00%
Bootstrap support for Q75CN8 as seed ortholog is 100%.
Bootstrap support for E1Z8P6 as seed ortholog is 100%.

Group of orthologs #1451. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 C.variabilis:56

Q75G39              	100.00%		F2YGQ6              	100.00%
Bootstrap support for Q75G39 as seed ortholog is 100%.
Bootstrap support for F2YGQ6 as seed ortholog is 100%.

Group of orthologs #1452. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:55

Q75EF6              	100.00%		E1Z564              	100.00%
                    	       		E1ZUD5              	7.89%
Bootstrap support for Q75EF6 as seed ortholog is 100%.
Bootstrap support for E1Z564 as seed ortholog is 100%.

Group of orthologs #1453. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:55

Q757A4              	100.00%		E1ZS55              	100.00%
                    	       		E1ZH93              	29.70%
Bootstrap support for Q757A4 as seed ortholog is 100%.
Bootstrap support for E1ZS55 as seed ortholog is 100%.

Group of orthologs #1454. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:55

Q752K4              	100.00%		E1ZCW0              	100.00%
Bootstrap support for Q752K4 as seed ortholog is 100%.
Bootstrap support for E1ZCW0 as seed ortholog is 100%.

Group of orthologs #1455. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:6 C.variabilis:55

Q758B1              	100.00%		E1ZE11              	100.00%
Bootstrap support for Q758B1 as seed ortholog is 35%.
Alternative seed ortholog is Q758Y6 (6 bits away from this cluster)
Bootstrap support for E1ZE11 as seed ortholog is 100%.

Group of orthologs #1456. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:55

Q75EL9              	100.00%		E1Z962              	100.00%
Bootstrap support for Q75EL9 as seed ortholog is 100%.
Bootstrap support for E1Z962 as seed ortholog is 100%.

Group of orthologs #1457. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:55

Q755N6              	100.00%		E1ZMN0              	100.00%
Bootstrap support for Q755N6 as seed ortholog is 100%.
Bootstrap support for E1ZMN0 as seed ortholog is 100%.

Group of orthologs #1458. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 C.variabilis:55

Q75AI5              	100.00%		E1ZNW5              	100.00%
Bootstrap support for Q75AI5 as seed ortholog is 100%.
Bootstrap support for E1ZNW5 as seed ortholog is 100%.

Group of orthologs #1459. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q75AL1              	100.00%		E1ZHV0              	100.00%
                    	       		E1Z9R7              	6.76%
Bootstrap support for Q75AL1 as seed ortholog is 100%.
Bootstrap support for E1ZHV0 as seed ortholog is 100%.

Group of orthologs #1460. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q754B3              	100.00%		E1Z2V2              	100.00%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for E1Z2V2 as seed ortholog is 100%.

Group of orthologs #1461. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q755R7              	100.00%		E1Z793              	100.00%
Bootstrap support for Q755R7 as seed ortholog is 100%.
Bootstrap support for E1Z793 as seed ortholog is 100%.

Group of orthologs #1462. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q74ZD0              	100.00%		E1ZC64              	100.00%
Bootstrap support for Q74ZD0 as seed ortholog is 100%.
Bootstrap support for E1ZC64 as seed ortholog is 100%.

Group of orthologs #1463. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q752C1              	100.00%		E1ZAP8              	100.00%
Bootstrap support for Q752C1 as seed ortholog is 100%.
Bootstrap support for E1ZAP8 as seed ortholog is 100%.

Group of orthologs #1464. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q75B19              	100.00%		E1ZFC1              	100.00%
Bootstrap support for Q75B19 as seed ortholog is 100%.
Bootstrap support for E1ZFC1 as seed ortholog is 100%.

Group of orthologs #1465. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.variabilis:54

Q759J6              	100.00%		E1ZTU3              	100.00%
Bootstrap support for Q759J6 as seed ortholog is 100%.
Bootstrap support for E1ZTU3 as seed ortholog is 100%.

Group of orthologs #1466. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 C.variabilis:53

Q75EL6              	100.00%		E1ZJE3              	100.00%
                    	       		E1ZJJ6              	54.97%
                    	       		E1ZJE4              	53.35%
                    	       		E1ZJE1              	49.73%
                    	       		E1ZJC9              	49.19%
                    	       		E1ZJD4              	45.39%
                    	       		E1ZJH2              	45.39%
                    	       		E1ZJH3              	45.03%
                    	       		E1ZS50              	43.76%
                    	       		E1ZJH0              	38.34%
                    	       		E1ZJD5              	35.44%
                    	       		E1ZJF2              	34.54%
                    	       		E1ZJH1              	28.75%
                    	       		E1ZJE2              	22.06%
                    	       		E1ZMN7              	21.70%
                    	       		E1ZHA0              	17.36%
                    	       		E1ZMB4              	15.37%
                    	       		E1ZM22              	13.20%
                    	       		E1ZJF3              	13.02%
                    	       		E1ZJD3              	10.67%
Bootstrap support for Q75EL6 as seed ortholog is 100%.
Bootstrap support for E1ZJE3 as seed ortholog is 100%.

Group of orthologs #1467. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 C.variabilis:53

Q758G8              	100.00%		E1ZGH4              	100.00%
Bootstrap support for Q758G8 as seed ortholog is 100%.
Bootstrap support for E1ZGH4 as seed ortholog is 100%.

Group of orthologs #1468. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 C.variabilis:53

Q75AY5              	100.00%		E1ZSN6              	100.00%
Bootstrap support for Q75AY5 as seed ortholog is 100%.
Bootstrap support for E1ZSN6 as seed ortholog is 100%.

Group of orthologs #1469. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:52

Q752L9              	100.00%		E1ZKE6              	100.00%
Q752L8              	15.73%		E1ZKF0              	5.42%
                    	       		E1ZKE9              	5.42%
Bootstrap support for Q752L9 as seed ortholog is 100%.
Bootstrap support for E1ZKE6 as seed ortholog is 100%.

Group of orthologs #1470. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:52

Q75EC0              	100.00%		E1Z341              	100.00%
                    	       		E1ZKI4              	11.62%
                    	       		E1Z4G2              	5.50%
Bootstrap support for Q75EC0 as seed ortholog is 100%.
Bootstrap support for E1Z341 as seed ortholog is 100%.

Group of orthologs #1471. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:52

Q753H3              	100.00%		E1Z2P9              	100.00%
                    	       		E1ZNR0              	22.93%
Bootstrap support for Q753H3 as seed ortholog is 100%.
Bootstrap support for E1Z2P9 as seed ortholog is 100%.

Group of orthologs #1472. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:52

Q753U8              	100.00%		E1Z900              	100.00%
Bootstrap support for Q753U8 as seed ortholog is 100%.
Bootstrap support for E1Z900 as seed ortholog is 100%.

Group of orthologs #1473. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:52

Q75EG5              	100.00%		E1ZGX5              	100.00%
Bootstrap support for Q75EG5 as seed ortholog is 100%.
Bootstrap support for E1ZGX5 as seed ortholog is 100%.

Group of orthologs #1474. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.variabilis:52

Q751T4              	100.00%		E1ZTV7              	100.00%
Bootstrap support for Q751T4 as seed ortholog is 100%.
Bootstrap support for E1ZTV7 as seed ortholog is 100%.

Group of orthologs #1475. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 C.variabilis:9

Q75CU9              	100.00%		E1ZRB9              	100.00%
                    	       		E1ZQY7              	47.98%
                    	       		E1ZSJ6              	25.05%
Bootstrap support for Q75CU9 as seed ortholog is 100%.
Bootstrap support for E1ZRB9 as seed ortholog is 60%.
Alternative seed ortholog is E1ZJV0 (9 bits away from this cluster)

Group of orthologs #1476. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 C.variabilis:51

Q758S0              	100.00%		E1ZKP7              	100.00%
Bootstrap support for Q758S0 as seed ortholog is 100%.
Bootstrap support for E1ZKP7 as seed ortholog is 100%.

Group of orthologs #1477. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 C.variabilis:51

Q756U8              	100.00%		E1ZM57              	100.00%
Bootstrap support for Q756U8 as seed ortholog is 100%.
Bootstrap support for E1ZM57 as seed ortholog is 100%.

Group of orthologs #1478. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 C.variabilis:50

Q755M7              	100.00%		E1ZQP0              	100.00%
                    	       		E1ZI73              	64.61%
                    	       		E1ZSF5              	20.15%
                    	       		E1ZIL0              	9.70%
Bootstrap support for Q755M7 as seed ortholog is 100%.
Bootstrap support for E1ZQP0 as seed ortholog is 100%.

Group of orthologs #1479. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 C.variabilis:50

Q750T9              	100.00%		E1Z9Z8              	100.00%
Bootstrap support for Q750T9 as seed ortholog is 100%.
Bootstrap support for E1Z9Z8 as seed ortholog is 100%.

Group of orthologs #1480. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 C.variabilis:50

Q75CG1              	100.00%		E1ZJ94              	100.00%
Bootstrap support for Q75CG1 as seed ortholog is 100%.
Bootstrap support for E1ZJ94 as seed ortholog is 100%.

Group of orthologs #1481. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 C.variabilis:49

Q74Z40              	100.00%		E1ZDG7              	100.00%
Bootstrap support for Q74Z40 as seed ortholog is 100%.
Bootstrap support for E1ZDG7 as seed ortholog is 100%.

Group of orthologs #1482. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 C.variabilis:49

Q74ZH5              	100.00%		E1ZTM6              	100.00%
Bootstrap support for Q74ZH5 as seed ortholog is 100%.
Bootstrap support for E1ZTM6 as seed ortholog is 100%.

Group of orthologs #1483. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 C.variabilis:48

Q75AF9              	100.00%		E1Z4S9              	100.00%
Bootstrap support for Q75AF9 as seed ortholog is 100%.
Bootstrap support for E1Z4S9 as seed ortholog is 100%.

Group of orthologs #1484. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 C.variabilis:48

Q753A3              	100.00%		E1ZGY0              	100.00%
Bootstrap support for Q753A3 as seed ortholog is 100%.
Bootstrap support for E1ZGY0 as seed ortholog is 100%.

Group of orthologs #1485. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 C.variabilis:48

Q75DM3              	100.00%		E1Z8Y9              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for E1Z8Y9 as seed ortholog is 100%.

Group of orthologs #1486. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 C.variabilis:48

Q75E52              	100.00%		E1ZLE2              	100.00%
Bootstrap support for Q75E52 as seed ortholog is 100%.
Bootstrap support for E1ZLE2 as seed ortholog is 100%.

Group of orthologs #1487. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 C.variabilis:47

Q756E9              	100.00%		E1ZMF4              	100.00%
                    	       		E1Z806              	11.75%
Bootstrap support for Q756E9 as seed ortholog is 100%.
Bootstrap support for E1ZMF4 as seed ortholog is 100%.

Group of orthologs #1488. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 C.variabilis:47

Q75D93              	100.00%		E1ZJT1              	100.00%
                    	       		E1ZHD8              	5.87%
Bootstrap support for Q75D93 as seed ortholog is 100%.
Bootstrap support for E1ZJT1 as seed ortholog is 100%.

Group of orthologs #1489. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 C.variabilis:47

Q756R8              	100.00%		E1ZET9              	100.00%
Bootstrap support for Q756R8 as seed ortholog is 100%.
Bootstrap support for E1ZET9 as seed ortholog is 100%.

Group of orthologs #1490. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 C.variabilis:46

Q754L3              	100.00%		E1ZUB2              	100.00%
Bootstrap support for Q754L3 as seed ortholog is 100%.
Bootstrap support for E1ZUB2 as seed ortholog is 100%.

Group of orthologs #1491. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q758R6              	100.00%		E1Z4B6              	100.00%
Bootstrap support for Q758R6 as seed ortholog is 100%.
Bootstrap support for E1Z4B6 as seed ortholog is 100%.

Group of orthologs #1492. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q753M3              	100.00%		E1ZCC0              	100.00%
Bootstrap support for Q753M3 as seed ortholog is 100%.
Bootstrap support for E1ZCC0 as seed ortholog is 100%.

Group of orthologs #1493. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q754Q6              	100.00%		E1ZCQ1              	100.00%
Bootstrap support for Q754Q6 as seed ortholog is 100%.
Bootstrap support for E1ZCQ1 as seed ortholog is 100%.

Group of orthologs #1494. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q75EV3              	100.00%		E1Z9Y2              	100.00%
Bootstrap support for Q75EV3 as seed ortholog is 100%.
Bootstrap support for E1Z9Y2 as seed ortholog is 100%.

Group of orthologs #1495. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q754A5              	100.00%		E1ZJS3              	100.00%
Bootstrap support for Q754A5 as seed ortholog is 100%.
Bootstrap support for E1ZJS3 as seed ortholog is 100%.

Group of orthologs #1496. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q75BH8              	100.00%		E1ZMK8              	100.00%
Bootstrap support for Q75BH8 as seed ortholog is 100%.
Bootstrap support for E1ZMK8 as seed ortholog is 100%.

Group of orthologs #1497. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q75CX4              	100.00%		E1ZTQ4              	100.00%
Bootstrap support for Q75CX4 as seed ortholog is 100%.
Bootstrap support for E1ZTQ4 as seed ortholog is 100%.

Group of orthologs #1498. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 C.variabilis:45

Q9HF53              	100.00%		F2YGL0              	100.00%
Bootstrap support for Q9HF53 as seed ortholog is 100%.
Bootstrap support for F2YGL0 as seed ortholog is 100%.

Group of orthologs #1499. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 C.variabilis:44

Q74Z07              	100.00%		E1Z658              	100.00%
Bootstrap support for Q74Z07 as seed ortholog is 100%.
Bootstrap support for E1Z658 as seed ortholog is 100%.

Group of orthologs #1500. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 C.variabilis:44

Q758K0              	100.00%		E1ZJK7              	100.00%
Bootstrap support for Q758K0 as seed ortholog is 100%.
Bootstrap support for E1ZJK7 as seed ortholog is 100%.

Group of orthologs #1501. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 C.variabilis:44

Q759M8              	100.00%		E1ZLG4              	100.00%
Bootstrap support for Q759M8 as seed ortholog is 100%.
Bootstrap support for E1ZLG4 as seed ortholog is 100%.

Group of orthologs #1502. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 C.variabilis:43

Q75CK7              	100.00%		E1ZP59              	100.00%
                    	       		E1ZBC2              	6.50%
Bootstrap support for Q75CK7 as seed ortholog is 100%.
Bootstrap support for E1ZP59 as seed ortholog is 100%.

Group of orthologs #1503. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 C.variabilis:43

Q75F30              	100.00%		E1Z6J8              	100.00%
Bootstrap support for Q75F30 as seed ortholog is 100%.
Bootstrap support for E1Z6J8 as seed ortholog is 100%.

Group of orthologs #1504. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 C.variabilis:42

Q752M0              	100.00%		E1ZHE5              	100.00%
                    	       		E1ZUE1              	59.05%
Bootstrap support for Q752M0 as seed ortholog is 100%.
Bootstrap support for E1ZHE5 as seed ortholog is 100%.

Group of orthologs #1505. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 C.variabilis:42

Q758H9              	100.00%		E1ZIL9              	100.00%
                    	       		E1ZSC3              	5.18%
Bootstrap support for Q758H9 as seed ortholog is 100%.
Bootstrap support for E1ZIL9 as seed ortholog is 100%.

Group of orthologs #1506. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 C.variabilis:42

Q757J6              	100.00%		E1ZKL5              	100.00%
Q75BX5              	6.33%		
Bootstrap support for Q757J6 as seed ortholog is 100%.
Bootstrap support for E1ZKL5 as seed ortholog is 100%.

Group of orthologs #1507. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 C.variabilis:41

Q759N8              	100.00%		E1ZF87              	100.00%
                    	       		E1ZC93              	5.15%
Bootstrap support for Q759N8 as seed ortholog is 100%.
Bootstrap support for E1ZF87 as seed ortholog is 100%.

Group of orthologs #1508. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 C.variabilis:40

Q75D21              	100.00%		E1ZJK3              	100.00%
Bootstrap support for Q75D21 as seed ortholog is 100%.
Bootstrap support for E1ZJK3 as seed ortholog is 100%.