###################################
3383 groups of orthologs
3424 in-paralogs from A.gossypii
3443 in-paralogs from C.lusitaniae
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3452 bits
Score difference with first non-orthologous sequence - A.gossypii:3452 C.lusitaniae:3452

Q74ZY4              	100.00%		C4Y9D9              	100.00%
Bootstrap support for Q74ZY4 as seed ortholog is 100%.
Bootstrap support for C4Y9D9 as seed ortholog is 100%.

Group of orthologs #2. Best score 3319 bits
Score difference with first non-orthologous sequence - A.gossypii:3319 C.lusitaniae:3319

Q75D15              	100.00%		C4XYI7              	100.00%
Bootstrap support for Q75D15 as seed ortholog is 100%.
Bootstrap support for C4XYI7 as seed ortholog is 100%.

Group of orthologs #3. Best score 3129 bits
Score difference with first non-orthologous sequence - A.gossypii:3129 C.lusitaniae:3129

Q75EK8              	100.00%		C4Y676              	100.00%
Bootstrap support for Q75EK8 as seed ortholog is 100%.
Bootstrap support for C4Y676 as seed ortholog is 100%.

Group of orthologs #4. Best score 3024 bits
Score difference with first non-orthologous sequence - A.gossypii:3024 C.lusitaniae:3024

Q755X5              	100.00%		C4YC00              	100.00%
Bootstrap support for Q755X5 as seed ortholog is 100%.
Bootstrap support for C4YC00 as seed ortholog is 100%.

Group of orthologs #5. Best score 2856 bits
Score difference with first non-orthologous sequence - A.gossypii:2856 C.lusitaniae:2856

Q759I7              	100.00%		C4Y5Y1              	100.00%
Bootstrap support for Q759I7 as seed ortholog is 100%.
Bootstrap support for C4Y5Y1 as seed ortholog is 100%.

Group of orthologs #6. Best score 2620 bits
Score difference with first non-orthologous sequence - A.gossypii:2620 C.lusitaniae:2620

Q755G1              	100.00%		C4Y7I2              	100.00%
Bootstrap support for Q755G1 as seed ortholog is 100%.
Bootstrap support for C4Y7I2 as seed ortholog is 100%.

Group of orthologs #7. Best score 2615 bits
Score difference with first non-orthologous sequence - A.gossypii:2615 C.lusitaniae:2615

Q757C8              	100.00%		C4Y5I8              	100.00%
Bootstrap support for Q757C8 as seed ortholog is 100%.
Bootstrap support for C4Y5I8 as seed ortholog is 100%.

Group of orthologs #8. Best score 2608 bits
Score difference with first non-orthologous sequence - A.gossypii:2608 C.lusitaniae:2608

Q75BK8              	100.00%		C4Y9A1              	100.00%
Bootstrap support for Q75BK8 as seed ortholog is 100%.
Bootstrap support for C4Y9A1 as seed ortholog is 100%.

Group of orthologs #9. Best score 2401 bits
Score difference with first non-orthologous sequence - A.gossypii:2401 C.lusitaniae:2401

Q9C1M7              	100.00%		C4Y3K2              	100.00%
Bootstrap support for Q9C1M7 as seed ortholog is 100%.
Bootstrap support for C4Y3K2 as seed ortholog is 100%.

Group of orthologs #10. Best score 2305 bits
Score difference with first non-orthologous sequence - A.gossypii:2305 C.lusitaniae:2305

Q75D82              	100.00%		C4Y0T8              	100.00%
Bootstrap support for Q75D82 as seed ortholog is 100%.
Bootstrap support for C4Y0T8 as seed ortholog is 100%.

Group of orthologs #11. Best score 2242 bits
Score difference with first non-orthologous sequence - A.gossypii:2242 C.lusitaniae:2242

Q756K2              	100.00%		C4Y380              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 100%.
Bootstrap support for C4Y380 as seed ortholog is 100%.

Group of orthologs #12. Best score 2219 bits
Score difference with first non-orthologous sequence - A.gossypii:2219 C.lusitaniae:2219

Q75A67              	100.00%		C4XWW9              	100.00%
Bootstrap support for Q75A67 as seed ortholog is 100%.
Bootstrap support for C4XWW9 as seed ortholog is 100%.

Group of orthologs #13. Best score 2131 bits
Score difference with first non-orthologous sequence - A.gossypii:2131 C.lusitaniae:2131

Q75A34              	100.00%		C4Y5N4              	100.00%
Bootstrap support for Q75A34 as seed ortholog is 100%.
Bootstrap support for C4Y5N4 as seed ortholog is 100%.

Group of orthologs #14. Best score 1894 bits
Score difference with first non-orthologous sequence - A.gossypii:1894 C.lusitaniae:1894

Q75B52              	100.00%		C4Y486              	100.00%
Bootstrap support for Q75B52 as seed ortholog is 100%.
Bootstrap support for C4Y486 as seed ortholog is 100%.

Group of orthologs #15. Best score 1880 bits
Score difference with first non-orthologous sequence - A.gossypii:1880 C.lusitaniae:1880

Q759A3              	100.00%		C4YAX5              	100.00%
Bootstrap support for Q759A3 as seed ortholog is 100%.
Bootstrap support for C4YAX5 as seed ortholog is 100%.

Group of orthologs #16. Best score 1876 bits
Score difference with first non-orthologous sequence - A.gossypii:1876 C.lusitaniae:1876

Q75DS1              	100.00%		C4Y3J9              	100.00%
Bootstrap support for Q75DS1 as seed ortholog is 100%.
Bootstrap support for C4Y3J9 as seed ortholog is 100%.

Group of orthologs #17. Best score 1761 bits
Score difference with first non-orthologous sequence - A.gossypii:1761 C.lusitaniae:1761

Q75ED6              	100.00%		C4Y4H0              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for C4Y4H0 as seed ortholog is 100%.

Group of orthologs #18. Best score 1710 bits
Score difference with first non-orthologous sequence - A.gossypii:1710 C.lusitaniae:1710

Q74ZZ1              	100.00%		C4Y9D5              	100.00%
Bootstrap support for Q74ZZ1 as seed ortholog is 100%.
Bootstrap support for C4Y9D5 as seed ortholog is 100%.

Group of orthologs #19. Best score 1706 bits
Score difference with first non-orthologous sequence - A.gossypii:1706 C.lusitaniae:1706

Q752K1              	100.00%		C4Y3Q5              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for C4Y3Q5 as seed ortholog is 100%.

Group of orthologs #20. Best score 1689 bits
Score difference with first non-orthologous sequence - A.gossypii:1689 C.lusitaniae:1689

Q752B8              	100.00%		C4XXS1              	100.00%
Bootstrap support for Q752B8 as seed ortholog is 100%.
Bootstrap support for C4XXS1 as seed ortholog is 100%.

Group of orthologs #21. Best score 1660 bits
Score difference with first non-orthologous sequence - A.gossypii:1660 C.lusitaniae:1660

Q75EV6              	100.00%		C4YC28              	100.00%
Bootstrap support for Q75EV6 as seed ortholog is 100%.
Bootstrap support for C4YC28 as seed ortholog is 100%.

Group of orthologs #22. Best score 1626 bits
Score difference with first non-orthologous sequence - A.gossypii:1626 C.lusitaniae:1626

Q759C3              	100.00%		C4Y518              	100.00%
Bootstrap support for Q759C3 as seed ortholog is 100%.
Bootstrap support for C4Y518 as seed ortholog is 100%.

Group of orthologs #23. Best score 1592 bits
Score difference with first non-orthologous sequence - A.gossypii:542 C.lusitaniae:1403

Q75D98              	100.00%		C4Y1U7              	100.00%
Q750T1              	47.81%		C4Y3K0              	100.00%
                    	       		C4Y5V3              	18.53%
Bootstrap support for Q75D98 as seed ortholog is 100%.
Bootstrap support for C4Y1U7 as seed ortholog is 100%.
Bootstrap support for C4Y3K0 as seed ortholog is 100%.

Group of orthologs #24. Best score 1516 bits
Score difference with first non-orthologous sequence - A.gossypii:1516 C.lusitaniae:1516

Q754A3              	100.00%		C4XW73              	100.00%
Bootstrap support for Q754A3 as seed ortholog is 100%.
Bootstrap support for C4XW73 as seed ortholog is 100%.

Group of orthologs #25. Best score 1514 bits
Score difference with first non-orthologous sequence - A.gossypii:1514 C.lusitaniae:1514

Q75EP5              	100.00%		C4Y1H5              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 100%.
Bootstrap support for C4Y1H5 as seed ortholog is 100%.

Group of orthologs #26. Best score 1510 bits
Score difference with first non-orthologous sequence - A.gossypii:1510 C.lusitaniae:1510

Q758E3              	100.00%		C4Y358              	100.00%
Bootstrap support for Q758E3 as seed ortholog is 100%.
Bootstrap support for C4Y358 as seed ortholog is 100%.

Group of orthologs #27. Best score 1498 bits
Score difference with first non-orthologous sequence - A.gossypii:1498 C.lusitaniae:1498

Q755X4              	100.00%		C4Y967              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 100%.
Bootstrap support for C4Y967 as seed ortholog is 100%.

Group of orthologs #28. Best score 1491 bits
Score difference with first non-orthologous sequence - A.gossypii:1032 C.lusitaniae:1491

Q74ZS5              	100.00%		C4Y7A5              	100.00%
Bootstrap support for Q74ZS5 as seed ortholog is 100%.
Bootstrap support for C4Y7A5 as seed ortholog is 100%.

Group of orthologs #29. Best score 1475 bits
Score difference with first non-orthologous sequence - A.gossypii:1475 C.lusitaniae:1475

Q74ZT5              	100.00%		C4Y376              	100.00%
Bootstrap support for Q74ZT5 as seed ortholog is 100%.
Bootstrap support for C4Y376 as seed ortholog is 100%.

Group of orthologs #30. Best score 1472 bits
Score difference with first non-orthologous sequence - A.gossypii:1472 C.lusitaniae:1472

Q75D66              	100.00%		C4XWV8              	100.00%
Bootstrap support for Q75D66 as seed ortholog is 100%.
Bootstrap support for C4XWV8 as seed ortholog is 100%.

Group of orthologs #31. Best score 1465 bits
Score difference with first non-orthologous sequence - A.gossypii:1465 C.lusitaniae:1465

Q755Z3              	100.00%		C4Y7P2              	100.00%
Bootstrap support for Q755Z3 as seed ortholog is 100%.
Bootstrap support for C4Y7P2 as seed ortholog is 100%.

Group of orthologs #32. Best score 1456 bits
Score difference with first non-orthologous sequence - A.gossypii:1456 C.lusitaniae:1456

Q754C8              	100.00%		C4YCF8              	100.00%
Bootstrap support for Q754C8 as seed ortholog is 100%.
Bootstrap support for C4YCF8 as seed ortholog is 100%.

Group of orthologs #33. Best score 1438 bits
Score difference with first non-orthologous sequence - A.gossypii:1438 C.lusitaniae:1438

Q759E6              	100.00%		C4Y5D0              	100.00%
Bootstrap support for Q759E6 as seed ortholog is 100%.
Bootstrap support for C4Y5D0 as seed ortholog is 100%.

Group of orthologs #34. Best score 1437 bits
Score difference with first non-orthologous sequence - A.gossypii:1437 C.lusitaniae:1437

Q75F16              	100.00%		C4XXJ3              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for C4XXJ3 as seed ortholog is 100%.

Group of orthologs #35. Best score 1432 bits
Score difference with first non-orthologous sequence - A.gossypii:1432 C.lusitaniae:1432

Q755D6              	100.00%		C4Y285              	100.00%
Bootstrap support for Q755D6 as seed ortholog is 100%.
Bootstrap support for C4Y285 as seed ortholog is 100%.

Group of orthologs #36. Best score 1424 bits
Score difference with first non-orthologous sequence - A.gossypii:1424 C.lusitaniae:1424

Q75DV0              	100.00%		C4Y5R8              	100.00%
Bootstrap support for Q75DV0 as seed ortholog is 100%.
Bootstrap support for C4Y5R8 as seed ortholog is 100%.

Group of orthologs #37. Best score 1414 bits
Score difference with first non-orthologous sequence - A.gossypii:1414 C.lusitaniae:1414

Q753Q4              	100.00%		C4Y645              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 100%.
Bootstrap support for C4Y645 as seed ortholog is 100%.

Group of orthologs #38. Best score 1412 bits
Score difference with first non-orthologous sequence - A.gossypii:1319 C.lusitaniae:1412

Q750N5              	100.00%		C4XZF6              	100.00%
Bootstrap support for Q750N5 as seed ortholog is 100%.
Bootstrap support for C4XZF6 as seed ortholog is 100%.

Group of orthologs #39. Best score 1402 bits
Score difference with first non-orthologous sequence - A.gossypii:1402 C.lusitaniae:1402

Q755Y6              	100.00%		C4YBC6              	100.00%
Bootstrap support for Q755Y6 as seed ortholog is 100%.
Bootstrap support for C4YBC6 as seed ortholog is 100%.

Group of orthologs #40. Best score 1401 bits
Score difference with first non-orthologous sequence - A.gossypii:1401 C.lusitaniae:1401

Q75AP8              	100.00%		C4Y827              	100.00%
Bootstrap support for Q75AP8 as seed ortholog is 100%.
Bootstrap support for C4Y827 as seed ortholog is 100%.

Group of orthologs #41. Best score 1400 bits
Score difference with first non-orthologous sequence - A.gossypii:1400 C.lusitaniae:1400

Q74Z60              	100.00%		C4YBQ4              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for C4YBQ4 as seed ortholog is 100%.

Group of orthologs #42. Best score 1381 bits
Score difference with first non-orthologous sequence - A.gossypii:1381 C.lusitaniae:1381

Q74ZS8              	100.00%		C4Y7S1              	100.00%
Bootstrap support for Q74ZS8 as seed ortholog is 100%.
Bootstrap support for C4Y7S1 as seed ortholog is 100%.

Group of orthologs #43. Best score 1371 bits
Score difference with first non-orthologous sequence - A.gossypii:1371 C.lusitaniae:1371

Q752Y8              	100.00%		C4Y7L0              	100.00%
Bootstrap support for Q752Y8 as seed ortholog is 100%.
Bootstrap support for C4Y7L0 as seed ortholog is 100%.

Group of orthologs #44. Best score 1359 bits
Score difference with first non-orthologous sequence - A.gossypii:455 C.lusitaniae:449

Q75AI4              	100.00%		C4Y061              	100.00%
Bootstrap support for Q75AI4 as seed ortholog is 100%.
Bootstrap support for C4Y061 as seed ortholog is 100%.

Group of orthologs #45. Best score 1357 bits
Score difference with first non-orthologous sequence - A.gossypii:1357 C.lusitaniae:1357

Q75BB3              	100.00%		C4Y8B8              	100.00%
Bootstrap support for Q75BB3 as seed ortholog is 100%.
Bootstrap support for C4Y8B8 as seed ortholog is 100%.

Group of orthologs #46. Best score 1354 bits
Score difference with first non-orthologous sequence - A.gossypii:1354 C.lusitaniae:1354

Q75A42              	100.00%		C4Y1C4              	100.00%
Bootstrap support for Q75A42 as seed ortholog is 100%.
Bootstrap support for C4Y1C4 as seed ortholog is 100%.

Group of orthologs #47. Best score 1347 bits
Score difference with first non-orthologous sequence - A.gossypii:1347 C.lusitaniae:1347

Q754B2              	100.00%		C4Y5V1              	100.00%
Bootstrap support for Q754B2 as seed ortholog is 100%.
Bootstrap support for C4Y5V1 as seed ortholog is 100%.

Group of orthologs #48. Best score 1345 bits
Score difference with first non-orthologous sequence - A.gossypii:1345 C.lusitaniae:1345

Q755F4              	100.00%		C4Y1W2              	100.00%
Bootstrap support for Q755F4 as seed ortholog is 100%.
Bootstrap support for C4Y1W2 as seed ortholog is 100%.

Group of orthologs #49. Best score 1327 bits
Score difference with first non-orthologous sequence - A.gossypii:1327 C.lusitaniae:1327

Q758F1              	100.00%		C4Y208              	100.00%
Bootstrap support for Q758F1 as seed ortholog is 100%.
Bootstrap support for C4Y208 as seed ortholog is 100%.

Group of orthologs #50. Best score 1316 bits
Score difference with first non-orthologous sequence - A.gossypii:1316 C.lusitaniae:1316

Q757P3              	100.00%		C4Y952              	100.00%
Bootstrap support for Q757P3 as seed ortholog is 100%.
Bootstrap support for C4Y952 as seed ortholog is 100%.

Group of orthologs #51. Best score 1314 bits
Score difference with first non-orthologous sequence - A.gossypii:1314 C.lusitaniae:1314

Q759C7              	100.00%		C4YAP2              	100.00%
Bootstrap support for Q759C7 as seed ortholog is 100%.
Bootstrap support for C4YAP2 as seed ortholog is 100%.

Group of orthologs #52. Best score 1312 bits
Score difference with first non-orthologous sequence - A.gossypii:1312 C.lusitaniae:1312

Q752K8              	100.00%		C4XXI6              	100.00%
Bootstrap support for Q752K8 as seed ortholog is 100%.
Bootstrap support for C4XXI6 as seed ortholog is 100%.

Group of orthologs #53. Best score 1304 bits
Score difference with first non-orthologous sequence - A.gossypii:1304 C.lusitaniae:1304

Q759B4              	100.00%		C4Y8W6              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for C4Y8W6 as seed ortholog is 100%.

Group of orthologs #54. Best score 1291 bits
Score difference with first non-orthologous sequence - A.gossypii:1291 C.lusitaniae:1291

Q75AG4              	100.00%		C4XVV4              	100.00%
Bootstrap support for Q75AG4 as seed ortholog is 100%.
Bootstrap support for C4XVV4 as seed ortholog is 100%.

Group of orthologs #55. Best score 1287 bits
Score difference with first non-orthologous sequence - A.gossypii:1287 C.lusitaniae:1287

Q755K8              	100.00%		C4Y0W2              	100.00%
Bootstrap support for Q755K8 as seed ortholog is 100%.
Bootstrap support for C4Y0W2 as seed ortholog is 100%.

Group of orthologs #56. Best score 1280 bits
Score difference with first non-orthologous sequence - A.gossypii:1280 C.lusitaniae:1280

Q755J0              	100.00%		C4Y5F7              	100.00%
Bootstrap support for Q755J0 as seed ortholog is 100%.
Bootstrap support for C4Y5F7 as seed ortholog is 100%.

Group of orthologs #57. Best score 1279 bits
Score difference with first non-orthologous sequence - A.gossypii:1279 C.lusitaniae:1279

Q758N1              	100.00%		C4Y8I7              	100.00%
Bootstrap support for Q758N1 as seed ortholog is 100%.
Bootstrap support for C4Y8I7 as seed ortholog is 100%.

Group of orthologs #58. Best score 1274 bits
Score difference with first non-orthologous sequence - A.gossypii:1274 C.lusitaniae:1274

Q757D1              	100.00%		C4Y5I7              	100.00%
Bootstrap support for Q757D1 as seed ortholog is 100%.
Bootstrap support for C4Y5I7 as seed ortholog is 100%.

Group of orthologs #59. Best score 1269 bits
Score difference with first non-orthologous sequence - A.gossypii:1269 C.lusitaniae:1269

Q75AE9              	100.00%		C4XYH8              	100.00%
Bootstrap support for Q75AE9 as seed ortholog is 100%.
Bootstrap support for C4XYH8 as seed ortholog is 100%.

Group of orthologs #60. Best score 1269 bits
Score difference with first non-orthologous sequence - A.gossypii:832 C.lusitaniae:1269

Q755Z2              	100.00%		C4Y7P0              	100.00%
Bootstrap support for Q755Z2 as seed ortholog is 100%.
Bootstrap support for C4Y7P0 as seed ortholog is 100%.

Group of orthologs #61. Best score 1247 bits
Score difference with first non-orthologous sequence - A.gossypii:1247 C.lusitaniae:1247

Q759A4              	100.00%		C4YAW3              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 100%.
Bootstrap support for C4YAW3 as seed ortholog is 100%.

Group of orthologs #62. Best score 1235 bits
Score difference with first non-orthologous sequence - A.gossypii:1235 C.lusitaniae:1235

Q753V3              	100.00%		C4XWK8              	100.00%
Bootstrap support for Q753V3 as seed ortholog is 100%.
Bootstrap support for C4XWK8 as seed ortholog is 100%.

Group of orthologs #63. Best score 1229 bits
Score difference with first non-orthologous sequence - A.gossypii:1229 C.lusitaniae:1229

Q758Q9              	100.00%		C4Y4I5              	100.00%
Bootstrap support for Q758Q9 as seed ortholog is 100%.
Bootstrap support for C4Y4I5 as seed ortholog is 100%.

Group of orthologs #64. Best score 1222 bits
Score difference with first non-orthologous sequence - A.gossypii:1222 C.lusitaniae:1222

Q752L2              	100.00%		C4Y8N2              	100.00%
Bootstrap support for Q752L2 as seed ortholog is 100%.
Bootstrap support for C4Y8N2 as seed ortholog is 100%.

Group of orthologs #65. Best score 1218 bits
Score difference with first non-orthologous sequence - A.gossypii:1119 C.lusitaniae:1218

Q74ZH1              	100.00%		C4Y3G7              	100.00%
Bootstrap support for Q74ZH1 as seed ortholog is 100%.
Bootstrap support for C4Y3G7 as seed ortholog is 100%.

Group of orthologs #66. Best score 1218 bits
Score difference with first non-orthologous sequence - A.gossypii:1218 C.lusitaniae:1218

Q753N2              	100.00%		C4Y9Y1              	100.00%
Bootstrap support for Q753N2 as seed ortholog is 100%.
Bootstrap support for C4Y9Y1 as seed ortholog is 100%.

Group of orthologs #67. Best score 1211 bits
Score difference with first non-orthologous sequence - A.gossypii:1211 C.lusitaniae:1211

Q75AI2              	100.00%		C4Y446              	100.00%
Bootstrap support for Q75AI2 as seed ortholog is 100%.
Bootstrap support for C4Y446 as seed ortholog is 100%.

Group of orthologs #68. Best score 1205 bits
Score difference with first non-orthologous sequence - A.gossypii:1205 C.lusitaniae:1205

Q757G6              	100.00%		C4Y4J7              	100.00%
Bootstrap support for Q757G6 as seed ortholog is 100%.
Bootstrap support for C4Y4J7 as seed ortholog is 100%.

Group of orthologs #69. Best score 1204 bits
Score difference with first non-orthologous sequence - A.gossypii:1204 C.lusitaniae:1204

Q752K7              	100.00%		C4XXI1              	100.00%
Bootstrap support for Q752K7 as seed ortholog is 100%.
Bootstrap support for C4XXI1 as seed ortholog is 100%.

Group of orthologs #70. Best score 1186 bits
Score difference with first non-orthologous sequence - A.gossypii:1186 C.lusitaniae:1186

Q756S6              	100.00%		C4Y759              	100.00%
Bootstrap support for Q756S6 as seed ortholog is 100%.
Bootstrap support for C4Y759 as seed ortholog is 100%.

Group of orthologs #71. Best score 1183 bits
Score difference with first non-orthologous sequence - A.gossypii:1183 C.lusitaniae:1183

Q75E97              	100.00%		C4Y2P0              	100.00%
Bootstrap support for Q75E97 as seed ortholog is 100%.
Bootstrap support for C4Y2P0 as seed ortholog is 100%.

Group of orthologs #72. Best score 1178 bits
Score difference with first non-orthologous sequence - A.gossypii:1178 C.lusitaniae:1178

Q755Q5              	100.00%		C4XYG1              	100.00%
Bootstrap support for Q755Q5 as seed ortholog is 100%.
Bootstrap support for C4XYG1 as seed ortholog is 100%.

Group of orthologs #73. Best score 1171 bits
Score difference with first non-orthologous sequence - A.gossypii:1171 C.lusitaniae:1171

Q8J2M3              	100.00%		C4XYH4              	100.00%
Bootstrap support for Q8J2M3 as seed ortholog is 100%.
Bootstrap support for C4XYH4 as seed ortholog is 100%.

Group of orthologs #74. Best score 1170 bits
Score difference with first non-orthologous sequence - A.gossypii:571 C.lusitaniae:609

Q751N6              	100.00%		C4Y863              	100.00%
                    	       		C4Y305              	14.93%
                    	       		C4Y342              	5.43%
Bootstrap support for Q751N6 as seed ortholog is 100%.
Bootstrap support for C4Y863 as seed ortholog is 100%.

Group of orthologs #75. Best score 1163 bits
Score difference with first non-orthologous sequence - A.gossypii:1163 C.lusitaniae:1163

Q75CF0              	100.00%		C4XZT0              	100.00%
Bootstrap support for Q75CF0 as seed ortholog is 100%.
Bootstrap support for C4XZT0 as seed ortholog is 100%.

Group of orthologs #76. Best score 1163 bits
Score difference with first non-orthologous sequence - A.gossypii:1163 C.lusitaniae:1163

Q75CR2              	100.00%		C4XZQ7              	100.00%
Bootstrap support for Q75CR2 as seed ortholog is 100%.
Bootstrap support for C4XZQ7 as seed ortholog is 100%.

Group of orthologs #77. Best score 1162 bits
Score difference with first non-orthologous sequence - A.gossypii:1162 C.lusitaniae:1162

Q750T6              	100.00%		C4Y7I3              	100.00%
Bootstrap support for Q750T6 as seed ortholog is 100%.
Bootstrap support for C4Y7I3 as seed ortholog is 100%.

Group of orthologs #78. Best score 1159 bits
Score difference with first non-orthologous sequence - A.gossypii:1159 C.lusitaniae:1159

Q75D10              	100.00%		C4XWS2              	100.00%
Bootstrap support for Q75D10 as seed ortholog is 100%.
Bootstrap support for C4XWS2 as seed ortholog is 100%.

Group of orthologs #79. Best score 1153 bits
Score difference with first non-orthologous sequence - A.gossypii:704 C.lusitaniae:832

Q74Z27              	100.00%		C4Y3Q9              	100.00%
Bootstrap support for Q74Z27 as seed ortholog is 100%.
Bootstrap support for C4Y3Q9 as seed ortholog is 100%.

Group of orthologs #80. Best score 1146 bits
Score difference with first non-orthologous sequence - A.gossypii:1146 C.lusitaniae:1146

Q753Z4              	100.00%		C4YBR9              	100.00%
Bootstrap support for Q753Z4 as seed ortholog is 100%.
Bootstrap support for C4YBR9 as seed ortholog is 100%.

Group of orthologs #81. Best score 1133 bits
Score difference with first non-orthologous sequence - A.gossypii:1133 C.lusitaniae:1133

Q75EM2              	100.00%		C4Y670              	100.00%
Bootstrap support for Q75EM2 as seed ortholog is 100%.
Bootstrap support for C4Y670 as seed ortholog is 100%.

Group of orthologs #82. Best score 1131 bits
Score difference with first non-orthologous sequence - A.gossypii:1131 C.lusitaniae:1131

Q757P4              	100.00%		C4Y1K7              	100.00%
Bootstrap support for Q757P4 as seed ortholog is 100%.
Bootstrap support for C4Y1K7 as seed ortholog is 100%.

Group of orthologs #83. Best score 1114 bits
Score difference with first non-orthologous sequence - A.gossypii:1114 C.lusitaniae:891

Q750I7              	100.00%		C4XZW9              	100.00%
Bootstrap support for Q750I7 as seed ortholog is 100%.
Bootstrap support for C4XZW9 as seed ortholog is 100%.

Group of orthologs #84. Best score 1114 bits
Score difference with first non-orthologous sequence - A.gossypii:1114 C.lusitaniae:1114

Q754K1              	100.00%		C4YC92              	100.00%
Bootstrap support for Q754K1 as seed ortholog is 100%.
Bootstrap support for C4YC92 as seed ortholog is 100%.

Group of orthologs #85. Best score 1112 bits
Score difference with first non-orthologous sequence - A.gossypii:721 C.lusitaniae:115

Q750B0              	100.00%		C4Y3E7              	100.00%
Bootstrap support for Q750B0 as seed ortholog is 100%.
Bootstrap support for C4Y3E7 as seed ortholog is 94%.

Group of orthologs #86. Best score 1109 bits
Score difference with first non-orthologous sequence - A.gossypii:30 C.lusitaniae:32

Q754F6              	100.00%		C4XZL8              	100.00%
Bootstrap support for Q754F6 as seed ortholog is 80%.
Bootstrap support for C4XZL8 as seed ortholog is 92%.

Group of orthologs #87. Best score 1109 bits
Score difference with first non-orthologous sequence - A.gossypii:1109 C.lusitaniae:1109

Q757U8              	100.00%		C4Y8L5              	100.00%
Bootstrap support for Q757U8 as seed ortholog is 100%.
Bootstrap support for C4Y8L5 as seed ortholog is 100%.

Group of orthologs #88. Best score 1102 bits
Score difference with first non-orthologous sequence - A.gossypii:1102 C.lusitaniae:1102

Q74ZM9              	100.00%		C4YAQ8              	100.00%
Bootstrap support for Q74ZM9 as seed ortholog is 100%.
Bootstrap support for C4YAQ8 as seed ortholog is 100%.

Group of orthologs #89. Best score 1094 bits
Score difference with first non-orthologous sequence - A.gossypii:1094 C.lusitaniae:1094

Q752E7              	100.00%		C4XXR2              	100.00%
Bootstrap support for Q752E7 as seed ortholog is 100%.
Bootstrap support for C4XXR2 as seed ortholog is 100%.

Group of orthologs #90. Best score 1093 bits
Score difference with first non-orthologous sequence - A.gossypii:1093 C.lusitaniae:1093

Q75DC5              	100.00%		C4Y4B6              	100.00%
Bootstrap support for Q75DC5 as seed ortholog is 100%.
Bootstrap support for C4Y4B6 as seed ortholog is 100%.

Group of orthologs #91. Best score 1093 bits
Score difference with first non-orthologous sequence - A.gossypii:1093 C.lusitaniae:1093

Q753S2              	100.00%		C4YC54              	100.00%
Bootstrap support for Q753S2 as seed ortholog is 100%.
Bootstrap support for C4YC54 as seed ortholog is 100%.

Group of orthologs #92. Best score 1089 bits
Score difference with first non-orthologous sequence - A.gossypii:1026 C.lusitaniae:1089

Q751K4              	100.00%		C4Y461              	100.00%
Bootstrap support for Q751K4 as seed ortholog is 100%.
Bootstrap support for C4Y461 as seed ortholog is 100%.

Group of orthologs #93. Best score 1087 bits
Score difference with first non-orthologous sequence - A.gossypii:1087 C.lusitaniae:1087

Q752M8              	100.00%		C4Y6I1              	100.00%
Bootstrap support for Q752M8 as seed ortholog is 100%.
Bootstrap support for C4Y6I1 as seed ortholog is 100%.

Group of orthologs #94. Best score 1087 bits
Score difference with first non-orthologous sequence - A.gossypii:1087 C.lusitaniae:1087

Q75CP0              	100.00%		C4Y498              	100.00%
Bootstrap support for Q75CP0 as seed ortholog is 100%.
Bootstrap support for C4Y498 as seed ortholog is 100%.

Group of orthologs #95. Best score 1082 bits
Score difference with first non-orthologous sequence - A.gossypii:1082 C.lusitaniae:1082

Q751U1              	100.00%		C4YA22              	100.00%
Bootstrap support for Q751U1 as seed ortholog is 100%.
Bootstrap support for C4YA22 as seed ortholog is 100%.

Group of orthologs #96. Best score 1078 bits
Score difference with first non-orthologous sequence - A.gossypii:1078 C.lusitaniae:1078

Q75CZ5              	100.00%		C4Y212              	100.00%
Bootstrap support for Q75CZ5 as seed ortholog is 100%.
Bootstrap support for C4Y212 as seed ortholog is 100%.

Group of orthologs #97. Best score 1077 bits
Score difference with first non-orthologous sequence - A.gossypii:1077 C.lusitaniae:1077

Q756R4              	100.00%		C4Y623              	100.00%
Bootstrap support for Q756R4 as seed ortholog is 100%.
Bootstrap support for C4Y623 as seed ortholog is 100%.

Group of orthologs #98. Best score 1076 bits
Score difference with first non-orthologous sequence - A.gossypii:1076 C.lusitaniae:1076

Q756A7              	100.00%		C4XWP4              	100.00%
Bootstrap support for Q756A7 as seed ortholog is 100%.
Bootstrap support for C4XWP4 as seed ortholog is 100%.

Group of orthologs #99. Best score 1072 bits
Score difference with first non-orthologous sequence - A.gossypii:941 C.lusitaniae:1072

Q758Q4              	100.00%		C4XYT9              	100.00%
Bootstrap support for Q758Q4 as seed ortholog is 100%.
Bootstrap support for C4XYT9 as seed ortholog is 100%.

Group of orthologs #100. Best score 1070 bits
Score difference with first non-orthologous sequence - A.gossypii:1070 C.lusitaniae:1070

Q74ZC6              	100.00%		C4Y8U2              	100.00%
Bootstrap support for Q74ZC6 as seed ortholog is 100%.
Bootstrap support for C4Y8U2 as seed ortholog is 100%.

Group of orthologs #101. Best score 1069 bits
Score difference with first non-orthologous sequence - A.gossypii:1069 C.lusitaniae:1069

Q75F00              	100.00%		C4Y0S0              	100.00%
Bootstrap support for Q75F00 as seed ortholog is 100%.
Bootstrap support for C4Y0S0 as seed ortholog is 100%.

Group of orthologs #102. Best score 1067 bits
Score difference with first non-orthologous sequence - A.gossypii:1067 C.lusitaniae:1067

Q758H0              	100.00%		C4Y0S9              	100.00%
Bootstrap support for Q758H0 as seed ortholog is 100%.
Bootstrap support for C4Y0S9 as seed ortholog is 100%.

Group of orthologs #103. Best score 1066 bits
Score difference with first non-orthologous sequence - A.gossypii:1008 C.lusitaniae:1066

Q751N9              	100.00%		C4YAW1              	100.00%
Bootstrap support for Q751N9 as seed ortholog is 100%.
Bootstrap support for C4YAW1 as seed ortholog is 100%.

Group of orthologs #104. Best score 1062 bits
Score difference with first non-orthologous sequence - A.gossypii:1062 C.lusitaniae:1062

Q757B9              	100.00%		C4XZS0              	100.00%
Bootstrap support for Q757B9 as seed ortholog is 100%.
Bootstrap support for C4XZS0 as seed ortholog is 100%.

Group of orthologs #105. Best score 1061 bits
Score difference with first non-orthologous sequence - A.gossypii:970 C.lusitaniae:1061

Q74ZW9              	100.00%		C4Y5H8              	100.00%
Bootstrap support for Q74ZW9 as seed ortholog is 100%.
Bootstrap support for C4Y5H8 as seed ortholog is 100%.

Group of orthologs #106. Best score 1060 bits
Score difference with first non-orthologous sequence - A.gossypii:1060 C.lusitaniae:1060

Q756Z8              	100.00%		C4XXN7              	100.00%
Bootstrap support for Q756Z8 as seed ortholog is 100%.
Bootstrap support for C4XXN7 as seed ortholog is 100%.

Group of orthologs #107. Best score 1058 bits
Score difference with first non-orthologous sequence - A.gossypii:1058 C.lusitaniae:1058

Q75AE3              	100.00%		C4Y3B6              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 100%.
Bootstrap support for C4Y3B6 as seed ortholog is 100%.

Group of orthologs #108. Best score 1058 bits
Score difference with first non-orthologous sequence - A.gossypii:1058 C.lusitaniae:1058

Q75BP7              	100.00%		C4Y8E3              	100.00%
Bootstrap support for Q75BP7 as seed ortholog is 100%.
Bootstrap support for C4Y8E3 as seed ortholog is 100%.

Group of orthologs #109. Best score 1055 bits
Score difference with first non-orthologous sequence - A.gossypii:1055 C.lusitaniae:1055

Q757X5              	100.00%		C4XX82              	100.00%
Bootstrap support for Q757X5 as seed ortholog is 100%.
Bootstrap support for C4XX82 as seed ortholog is 100%.

Group of orthologs #110. Best score 1055 bits
Score difference with first non-orthologous sequence - A.gossypii:1055 C.lusitaniae:1055

Q75CF8              	100.00%		C4YCG5              	100.00%
Bootstrap support for Q75CF8 as seed ortholog is 100%.
Bootstrap support for C4YCG5 as seed ortholog is 100%.

Group of orthologs #111. Best score 1052 bits
Score difference with first non-orthologous sequence - A.gossypii:1052 C.lusitaniae:1052

Q752T2              	100.00%		C4Y3I2              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for C4Y3I2 as seed ortholog is 100%.

Group of orthologs #112. Best score 1051 bits
Score difference with first non-orthologous sequence - A.gossypii:1051 C.lusitaniae:1051

Q756R6              	100.00%		C4XWJ4              	100.00%
Bootstrap support for Q756R6 as seed ortholog is 100%.
Bootstrap support for C4XWJ4 as seed ortholog is 100%.

Group of orthologs #113. Best score 1044 bits
Score difference with first non-orthologous sequence - A.gossypii:1044 C.lusitaniae:1044

Q752M7              	100.00%		C4Y8B3              	100.00%
Bootstrap support for Q752M7 as seed ortholog is 100%.
Bootstrap support for C4Y8B3 as seed ortholog is 100%.

Group of orthologs #114. Best score 1042 bits
Score difference with first non-orthologous sequence - A.gossypii:1042 C.lusitaniae:1042

Q75BT0              	100.00%		C4Y6V6              	100.00%
Bootstrap support for Q75BT0 as seed ortholog is 100%.
Bootstrap support for C4Y6V6 as seed ortholog is 100%.

Group of orthologs #115. Best score 1037 bits
Score difference with first non-orthologous sequence - A.gossypii:1037 C.lusitaniae:1037

Q75A89              	100.00%		C4XY87              	100.00%
Bootstrap support for Q75A89 as seed ortholog is 100%.
Bootstrap support for C4XY87 as seed ortholog is 100%.

Group of orthologs #116. Best score 1034 bits
Score difference with first non-orthologous sequence - A.gossypii:1034 C.lusitaniae:1034

Q750G7              	100.00%		C4Y7U9              	100.00%
Bootstrap support for Q750G7 as seed ortholog is 100%.
Bootstrap support for C4Y7U9 as seed ortholog is 100%.

Group of orthologs #117. Best score 1034 bits
Score difference with first non-orthologous sequence - A.gossypii:1034 C.lusitaniae:1034

Q75F93              	100.00%		C4XWY0              	100.00%
Bootstrap support for Q75F93 as seed ortholog is 100%.
Bootstrap support for C4XWY0 as seed ortholog is 100%.

Group of orthologs #118. Best score 1032 bits
Score difference with first non-orthologous sequence - A.gossypii:331 C.lusitaniae:307

Q75E44              	100.00%		C4Y2Q8              	100.00%
Bootstrap support for Q75E44 as seed ortholog is 100%.
Bootstrap support for C4Y2Q8 as seed ortholog is 100%.

Group of orthologs #119. Best score 1031 bits
Score difference with first non-orthologous sequence - A.gossypii:1031 C.lusitaniae:1031

Q75AI9              	100.00%		C4Y4S7              	100.00%
Bootstrap support for Q75AI9 as seed ortholog is 100%.
Bootstrap support for C4Y4S7 as seed ortholog is 100%.

Group of orthologs #120. Best score 1027 bits
Score difference with first non-orthologous sequence - A.gossypii:1027 C.lusitaniae:1027

Q756Z0              	100.00%		C4XZX7              	100.00%
Bootstrap support for Q756Z0 as seed ortholog is 100%.
Bootstrap support for C4XZX7 as seed ortholog is 100%.

Group of orthologs #121. Best score 1022 bits
Score difference with first non-orthologous sequence - A.gossypii:1022 C.lusitaniae:942

Q75C64              	100.00%		C4XX21              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for C4XX21 as seed ortholog is 100%.

Group of orthologs #122. Best score 1018 bits
Score difference with first non-orthologous sequence - A.gossypii:1018 C.lusitaniae:1018

Q74ZT2              	100.00%		C4Y9E8              	100.00%
Bootstrap support for Q74ZT2 as seed ortholog is 100%.
Bootstrap support for C4Y9E8 as seed ortholog is 100%.

Group of orthologs #123. Best score 1015 bits
Score difference with first non-orthologous sequence - A.gossypii:1015 C.lusitaniae:1015

Q75AK6              	100.00%		C4XZ42              	100.00%
Bootstrap support for Q75AK6 as seed ortholog is 100%.
Bootstrap support for C4XZ42 as seed ortholog is 100%.

Group of orthologs #124. Best score 1012 bits
Score difference with first non-orthologous sequence - A.gossypii:1012 C.lusitaniae:1012

Q75DY5              	100.00%		C4Y578              	100.00%
Bootstrap support for Q75DY5 as seed ortholog is 100%.
Bootstrap support for C4Y578 as seed ortholog is 100%.

Group of orthologs #125. Best score 1010 bits
Score difference with first non-orthologous sequence - A.gossypii:1010 C.lusitaniae:1010

Q75D85              	100.00%		C4Y0R2              	100.00%
Bootstrap support for Q75D85 as seed ortholog is 100%.
Bootstrap support for C4Y0R2 as seed ortholog is 100%.

Group of orthologs #126. Best score 1009 bits
Score difference with first non-orthologous sequence - A.gossypii:1009 C.lusitaniae:1009

Q75BD7              	100.00%		C4Y5D7              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for C4Y5D7 as seed ortholog is 100%.

Group of orthologs #127. Best score 1007 bits
Score difference with first non-orthologous sequence - A.gossypii:1007 C.lusitaniae:1007

Q75DL8              	100.00%		C4XY29              	100.00%
Bootstrap support for Q75DL8 as seed ortholog is 100%.
Bootstrap support for C4XY29 as seed ortholog is 100%.

Group of orthologs #128. Best score 1005 bits
Score difference with first non-orthologous sequence - A.gossypii:1005 C.lusitaniae:1005

Q753V9              	100.00%		C4Y6C1              	100.00%
Bootstrap support for Q753V9 as seed ortholog is 100%.
Bootstrap support for C4Y6C1 as seed ortholog is 100%.

Group of orthologs #129. Best score 1000 bits
Score difference with first non-orthologous sequence - A.gossypii:1000 C.lusitaniae:1000

Q9UVJ8              	100.00%		C4Y1B3              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for C4Y1B3 as seed ortholog is 100%.

Group of orthologs #130. Best score 996 bits
Score difference with first non-orthologous sequence - A.gossypii:996 C.lusitaniae:996

Q752T8              	100.00%		C4XZK1              	100.00%
Bootstrap support for Q752T8 as seed ortholog is 100%.
Bootstrap support for C4XZK1 as seed ortholog is 100%.

Group of orthologs #131. Best score 995 bits
Score difference with first non-orthologous sequence - A.gossypii:995 C.lusitaniae:995

Q74ZK6              	100.00%		C4Y1E1              	100.00%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for C4Y1E1 as seed ortholog is 100%.

Group of orthologs #132. Best score 994 bits
Score difference with first non-orthologous sequence - A.gossypii:994 C.lusitaniae:994

Q750Y5              	100.00%		C4XW42              	100.00%
Bootstrap support for Q750Y5 as seed ortholog is 100%.
Bootstrap support for C4XW42 as seed ortholog is 100%.

Group of orthologs #133. Best score 993 bits
Score difference with first non-orthologous sequence - A.gossypii:993 C.lusitaniae:993

Q75BD2              	100.00%		C4XW47              	100.00%
Bootstrap support for Q75BD2 as seed ortholog is 100%.
Bootstrap support for C4XW47 as seed ortholog is 100%.

Group of orthologs #134. Best score 993 bits
Score difference with first non-orthologous sequence - A.gossypii:401 C.lusitaniae:316

Q753R1              	100.00%		C4Y7E4              	100.00%
Bootstrap support for Q753R1 as seed ortholog is 100%.
Bootstrap support for C4Y7E4 as seed ortholog is 100%.

Group of orthologs #135. Best score 991 bits
Score difference with first non-orthologous sequence - A.gossypii:888 C.lusitaniae:991

Q750T7              	100.00%		C4XZM0              	100.00%
Bootstrap support for Q750T7 as seed ortholog is 100%.
Bootstrap support for C4XZM0 as seed ortholog is 100%.

Group of orthologs #136. Best score 990 bits
Score difference with first non-orthologous sequence - A.gossypii:990 C.lusitaniae:990

Q757D2              	100.00%		C4XW19              	100.00%
Bootstrap support for Q757D2 as seed ortholog is 100%.
Bootstrap support for C4XW19 as seed ortholog is 100%.

Group of orthologs #137. Best score 990 bits
Score difference with first non-orthologous sequence - A.gossypii:990 C.lusitaniae:990

Q75CF3              	100.00%		C4Y6R6              	100.00%
Bootstrap support for Q75CF3 as seed ortholog is 100%.
Bootstrap support for C4Y6R6 as seed ortholog is 100%.

Group of orthologs #138. Best score 988 bits
Score difference with first non-orthologous sequence - A.gossypii:988 C.lusitaniae:988

Q75CI2              	100.00%		C4YAP4              	100.00%
Bootstrap support for Q75CI2 as seed ortholog is 100%.
Bootstrap support for C4YAP4 as seed ortholog is 100%.

Group of orthologs #139. Best score 985 bits
Score difference with first non-orthologous sequence - A.gossypii:985 C.lusitaniae:985

Q75DQ3              	100.00%		C4Y2A0              	100.00%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for C4Y2A0 as seed ortholog is 100%.

Group of orthologs #140. Best score 980 bits
Score difference with first non-orthologous sequence - A.gossypii:980 C.lusitaniae:902

Q74ZS3              	100.00%		C4Y7A6              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for C4Y7A6 as seed ortholog is 100%.

Group of orthologs #141. Best score 977 bits
Score difference with first non-orthologous sequence - A.gossypii:977 C.lusitaniae:977

Q74Z48              	100.00%		C4Y537              	100.00%
Bootstrap support for Q74Z48 as seed ortholog is 100%.
Bootstrap support for C4Y537 as seed ortholog is 100%.

Group of orthologs #142. Best score 977 bits
Score difference with first non-orthologous sequence - A.gossypii:977 C.lusitaniae:977

Q75EQ9              	100.00%		C4Y9K0              	100.00%
Bootstrap support for Q75EQ9 as seed ortholog is 100%.
Bootstrap support for C4Y9K0 as seed ortholog is 100%.

Group of orthologs #143. Best score 974 bits
Score difference with first non-orthologous sequence - A.gossypii:974 C.lusitaniae:974

Q74ZJ9              	100.00%		C4Y1D6              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for C4Y1D6 as seed ortholog is 100%.

Group of orthologs #144. Best score 974 bits
Score difference with first non-orthologous sequence - A.gossypii:974 C.lusitaniae:974

Q754P1              	100.00%		C4Y4U4              	100.00%
Bootstrap support for Q754P1 as seed ortholog is 100%.
Bootstrap support for C4Y4U4 as seed ortholog is 100%.

Group of orthologs #145. Best score 972 bits
Score difference with first non-orthologous sequence - A.gossypii:972 C.lusitaniae:972

Q750G1              	100.00%		C4Y974              	100.00%
Bootstrap support for Q750G1 as seed ortholog is 100%.
Bootstrap support for C4Y974 as seed ortholog is 100%.

Group of orthologs #146. Best score 971 bits
Score difference with first non-orthologous sequence - A.gossypii:971 C.lusitaniae:971

Q750J1              	100.00%		C4YB08              	100.00%
Bootstrap support for Q750J1 as seed ortholog is 100%.
Bootstrap support for C4YB08 as seed ortholog is 100%.

Group of orthologs #147. Best score 968 bits
Score difference with first non-orthologous sequence - A.gossypii:968 C.lusitaniae:968

Q750B4              	100.00%		C4XZD7              	100.00%
Bootstrap support for Q750B4 as seed ortholog is 100%.
Bootstrap support for C4XZD7 as seed ortholog is 100%.

Group of orthologs #148. Best score 965 bits
Score difference with first non-orthologous sequence - A.gossypii:965 C.lusitaniae:965

Q75ES1              	100.00%		C4Y669              	100.00%
Bootstrap support for Q75ES1 as seed ortholog is 100%.
Bootstrap support for C4Y669 as seed ortholog is 100%.

Group of orthologs #149. Best score 955 bits
Score difference with first non-orthologous sequence - A.gossypii:955 C.lusitaniae:869

Q753U3              	100.00%		C4Y233              	100.00%
Bootstrap support for Q753U3 as seed ortholog is 100%.
Bootstrap support for C4Y233 as seed ortholog is 100%.

Group of orthologs #150. Best score 951 bits
Score difference with first non-orthologous sequence - A.gossypii:951 C.lusitaniae:951

Q74ZE0              	100.00%		C4Y897              	100.00%
Bootstrap support for Q74ZE0 as seed ortholog is 100%.
Bootstrap support for C4Y897 as seed ortholog is 100%.

Group of orthologs #151. Best score 951 bits
Score difference with first non-orthologous sequence - A.gossypii:951 C.lusitaniae:951

Q758I5              	100.00%		C4Y2K3              	100.00%
Bootstrap support for Q758I5 as seed ortholog is 100%.
Bootstrap support for C4Y2K3 as seed ortholog is 100%.

Group of orthologs #152. Best score 951 bits
Score difference with first non-orthologous sequence - A.gossypii:699 C.lusitaniae:832

Q75BB2              	100.00%		C4Y8B7              	100.00%
Bootstrap support for Q75BB2 as seed ortholog is 100%.
Bootstrap support for C4Y8B7 as seed ortholog is 100%.

Group of orthologs #153. Best score 949 bits
Score difference with first non-orthologous sequence - A.gossypii:224 C.lusitaniae:170

Q75C78              	100.00%		C4YC34              	100.00%
Bootstrap support for Q75C78 as seed ortholog is 100%.
Bootstrap support for C4YC34 as seed ortholog is 99%.

Group of orthologs #154. Best score 945 bits
Score difference with first non-orthologous sequence - A.gossypii:945 C.lusitaniae:945

Q75C49              	100.00%		C4Y9M1              	100.00%
Bootstrap support for Q75C49 as seed ortholog is 100%.
Bootstrap support for C4Y9M1 as seed ortholog is 100%.

Group of orthologs #155. Best score 939 bits
Score difference with first non-orthologous sequence - A.gossypii:939 C.lusitaniae:939

Q753Y4              	100.00%		C4XZI5              	100.00%
Bootstrap support for Q753Y4 as seed ortholog is 100%.
Bootstrap support for C4XZI5 as seed ortholog is 100%.

Group of orthologs #156. Best score 938 bits
Score difference with first non-orthologous sequence - A.gossypii:938 C.lusitaniae:938

Q75F11              	100.00%		C4YBZ4              	100.00%
Bootstrap support for Q75F11 as seed ortholog is 100%.
Bootstrap support for C4YBZ4 as seed ortholog is 100%.

Group of orthologs #157. Best score 937 bits
Score difference with first non-orthologous sequence - A.gossypii:937 C.lusitaniae:937

Q755V7              	100.00%		C4Y485              	100.00%
Bootstrap support for Q755V7 as seed ortholog is 100%.
Bootstrap support for C4Y485 as seed ortholog is 100%.

Group of orthologs #158. Best score 935 bits
Score difference with first non-orthologous sequence - A.gossypii:935 C.lusitaniae:935

Q74ZY9              	100.00%		C4YA20              	100.00%
Bootstrap support for Q74ZY9 as seed ortholog is 100%.
Bootstrap support for C4YA20 as seed ortholog is 100%.

Group of orthologs #159. Best score 930 bits
Score difference with first non-orthologous sequence - A.gossypii:930 C.lusitaniae:930

Q74Z74              	100.00%		C4Y0R7              	100.00%
Bootstrap support for Q74Z74 as seed ortholog is 100%.
Bootstrap support for C4Y0R7 as seed ortholog is 100%.

Group of orthologs #160. Best score 928 bits
Score difference with first non-orthologous sequence - A.gossypii:928 C.lusitaniae:928

Q74ZC3              	100.00%		C4Y098              	100.00%
Bootstrap support for Q74ZC3 as seed ortholog is 100%.
Bootstrap support for C4Y098 as seed ortholog is 100%.

Group of orthologs #161. Best score 920 bits
Score difference with first non-orthologous sequence - A.gossypii:920 C.lusitaniae:920

Q757B1              	100.00%		C4XW37              	100.00%
Bootstrap support for Q757B1 as seed ortholog is 100%.
Bootstrap support for C4XW37 as seed ortholog is 100%.

Group of orthologs #162. Best score 920 bits
Score difference with first non-orthologous sequence - A.gossypii:920 C.lusitaniae:363

Q75D67              	100.00%		C4Y062              	100.00%
Bootstrap support for Q75D67 as seed ortholog is 100%.
Bootstrap support for C4Y062 as seed ortholog is 100%.

Group of orthologs #163. Best score 918 bits
Score difference with first non-orthologous sequence - A.gossypii:817 C.lusitaniae:354

Q758M7              	100.00%		C4XXV6              	100.00%
Bootstrap support for Q758M7 as seed ortholog is 100%.
Bootstrap support for C4XXV6 as seed ortholog is 100%.

Group of orthologs #164. Best score 918 bits
Score difference with first non-orthologous sequence - A.gossypii:918 C.lusitaniae:918

Q75DS7              	100.00%		C4XY18              	100.00%
Bootstrap support for Q75DS7 as seed ortholog is 100%.
Bootstrap support for C4XY18 as seed ortholog is 100%.

Group of orthologs #165. Best score 916 bits
Score difference with first non-orthologous sequence - A.gossypii:916 C.lusitaniae:916

Q758L7              	100.00%		C4YAF8              	100.00%
Bootstrap support for Q758L7 as seed ortholog is 100%.
Bootstrap support for C4YAF8 as seed ortholog is 100%.

Group of orthologs #166. Best score 915 bits
Score difference with first non-orthologous sequence - A.gossypii:779 C.lusitaniae:286

Q75BI1              	100.00%		C4Y5R4              	100.00%
Bootstrap support for Q75BI1 as seed ortholog is 100%.
Bootstrap support for C4Y5R4 as seed ortholog is 100%.

Group of orthologs #167. Best score 913 bits
Score difference with first non-orthologous sequence - A.gossypii:913 C.lusitaniae:913

Q756G2              	100.00%		C4Y039              	100.00%
Bootstrap support for Q756G2 as seed ortholog is 100%.
Bootstrap support for C4Y039 as seed ortholog is 100%.

Group of orthologs #168. Best score 913 bits
Score difference with first non-orthologous sequence - A.gossypii:674 C.lusitaniae:913

Q75D18              	100.00%		C4Y2K0              	100.00%
Bootstrap support for Q75D18 as seed ortholog is 100%.
Bootstrap support for C4Y2K0 as seed ortholog is 100%.

Group of orthologs #169. Best score 912 bits
Score difference with first non-orthologous sequence - A.gossypii:912 C.lusitaniae:912

Q753G0              	100.00%		C4Y1H9              	100.00%
Bootstrap support for Q753G0 as seed ortholog is 100%.
Bootstrap support for C4Y1H9 as seed ortholog is 100%.

Group of orthologs #170. Best score 909 bits
Score difference with first non-orthologous sequence - A.gossypii:909 C.lusitaniae:909

Q757S3              	100.00%		C4Y877              	100.00%
Bootstrap support for Q757S3 as seed ortholog is 100%.
Bootstrap support for C4Y877 as seed ortholog is 100%.

Group of orthologs #171. Best score 906 bits
Score difference with first non-orthologous sequence - A.gossypii:906 C.lusitaniae:906

Q756M9              	100.00%		C4XXZ4              	100.00%
Bootstrap support for Q756M9 as seed ortholog is 100%.
Bootstrap support for C4XXZ4 as seed ortholog is 100%.

Group of orthologs #172. Best score 905 bits
Score difference with first non-orthologous sequence - A.gossypii:905 C.lusitaniae:905

Q756V0              	100.00%		C4Y8G2              	100.00%
Bootstrap support for Q756V0 as seed ortholog is 100%.
Bootstrap support for C4Y8G2 as seed ortholog is 100%.

Group of orthologs #173. Best score 903 bits
Score difference with first non-orthologous sequence - A.gossypii:903 C.lusitaniae:903

Q75BE4              	100.00%		C4XXR3              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for C4XXR3 as seed ortholog is 100%.

Group of orthologs #174. Best score 902 bits
Score difference with first non-orthologous sequence - A.gossypii:902 C.lusitaniae:902

Q75DB0              	100.00%		C4Y251              	100.00%
Bootstrap support for Q75DB0 as seed ortholog is 100%.
Bootstrap support for C4Y251 as seed ortholog is 100%.

Group of orthologs #175. Best score 900 bits
Score difference with first non-orthologous sequence - A.gossypii:818 C.lusitaniae:900

Q758Q8              	100.00%		C4Y297              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for C4Y297 as seed ortholog is 100%.

Group of orthologs #176. Best score 898 bits
Score difference with first non-orthologous sequence - A.gossypii:898 C.lusitaniae:898

Q74Z55              	100.00%		C4XY88              	100.00%
Bootstrap support for Q74Z55 as seed ortholog is 100%.
Bootstrap support for C4XY88 as seed ortholog is 100%.

Group of orthologs #177. Best score 896 bits
Score difference with first non-orthologous sequence - A.gossypii:896 C.lusitaniae:896

Q74ZR6              	100.00%		C4Y7A3              	100.00%
Bootstrap support for Q74ZR6 as seed ortholog is 100%.
Bootstrap support for C4Y7A3 as seed ortholog is 100%.

Group of orthologs #178. Best score 896 bits
Score difference with first non-orthologous sequence - A.gossypii:896 C.lusitaniae:896

Q75DX9              	100.00%		C4XXK3              	100.00%
Bootstrap support for Q75DX9 as seed ortholog is 100%.
Bootstrap support for C4XXK3 as seed ortholog is 100%.

Group of orthologs #179. Best score 894 bits
Score difference with first non-orthologous sequence - A.gossypii:894 C.lusitaniae:894

Q75CB7              	100.00%		C4XZS7              	100.00%
Bootstrap support for Q75CB7 as seed ortholog is 100%.
Bootstrap support for C4XZS7 as seed ortholog is 100%.

Group of orthologs #180. Best score 894 bits
Score difference with first non-orthologous sequence - A.gossypii:894 C.lusitaniae:894

Q753P8              	100.00%		C4Y8S5              	100.00%
Bootstrap support for Q753P8 as seed ortholog is 100%.
Bootstrap support for C4Y8S5 as seed ortholog is 100%.

Group of orthologs #181. Best score 893 bits
Score difference with first non-orthologous sequence - A.gossypii:893 C.lusitaniae:893

Q75DV2              	100.00%		C4Y072              	100.00%
Bootstrap support for Q75DV2 as seed ortholog is 100%.
Bootstrap support for C4Y072 as seed ortholog is 100%.

Group of orthologs #182. Best score 892 bits
Score difference with first non-orthologous sequence - A.gossypii:892 C.lusitaniae:892

Q755P1              	100.00%		C4Y2V5              	100.00%
Bootstrap support for Q755P1 as seed ortholog is 100%.
Bootstrap support for C4Y2V5 as seed ortholog is 100%.

Group of orthologs #183. Best score 892 bits
Score difference with first non-orthologous sequence - A.gossypii:658 C.lusitaniae:892

Q758Q0              	100.00%		C4Y510              	100.00%
Bootstrap support for Q758Q0 as seed ortholog is 100%.
Bootstrap support for C4Y510 as seed ortholog is 100%.

Group of orthologs #184. Best score 891 bits
Score difference with first non-orthologous sequence - A.gossypii:891 C.lusitaniae:891

Q750C0              	100.00%		C4Y696              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 100%.
Bootstrap support for C4Y696 as seed ortholog is 100%.

Group of orthologs #185. Best score 890 bits
Score difference with first non-orthologous sequence - A.gossypii:607 C.lusitaniae:615

Q74ZJ0              	100.00%		C4Y1D4              	100.00%
Bootstrap support for Q74ZJ0 as seed ortholog is 100%.
Bootstrap support for C4Y1D4 as seed ortholog is 100%.

Group of orthologs #186. Best score 889 bits
Score difference with first non-orthologous sequence - A.gossypii:889 C.lusitaniae:889

Q75A77              	100.00%		C4Y7I5              	100.00%
Bootstrap support for Q75A77 as seed ortholog is 100%.
Bootstrap support for C4Y7I5 as seed ortholog is 100%.

Group of orthologs #187. Best score 888 bits
Score difference with first non-orthologous sequence - A.gossypii:832 C.lusitaniae:888

Q754B5              	100.00%		C4XXE6              	100.00%
Bootstrap support for Q754B5 as seed ortholog is 100%.
Bootstrap support for C4XXE6 as seed ortholog is 100%.

Group of orthologs #188. Best score 888 bits
Score difference with first non-orthologous sequence - A.gossypii:888 C.lusitaniae:888

Q755V8              	100.00%		C4YBE7              	100.00%
Bootstrap support for Q755V8 as seed ortholog is 100%.
Bootstrap support for C4YBE7 as seed ortholog is 100%.

Group of orthologs #189. Best score 880 bits
Score difference with first non-orthologous sequence - A.gossypii:880 C.lusitaniae:880

Q755M0              	100.00%		C4Y641              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for C4Y641 as seed ortholog is 100%.

Group of orthologs #190. Best score 879 bits
Score difference with first non-orthologous sequence - A.gossypii:879 C.lusitaniae:879

Q758L0              	100.00%		C4XYW6              	100.00%
Bootstrap support for Q758L0 as seed ortholog is 100%.
Bootstrap support for C4XYW6 as seed ortholog is 100%.

Group of orthologs #191. Best score 878 bits
Score difference with first non-orthologous sequence - A.gossypii:878 C.lusitaniae:878

Q753K9              	100.00%		C4Y7I9              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 100%.
Bootstrap support for C4Y7I9 as seed ortholog is 100%.

Group of orthologs #192. Best score 877 bits
Score difference with first non-orthologous sequence - A.gossypii:877 C.lusitaniae:877

Q75CX2              	100.00%		C4Y674              	100.00%
Q751P2              	36.81%		
Q75EM6              	12.50%		
Bootstrap support for Q75CX2 as seed ortholog is 100%.
Bootstrap support for C4Y674 as seed ortholog is 100%.

Group of orthologs #193. Best score 877 bits
Score difference with first non-orthologous sequence - A.gossypii:877 C.lusitaniae:877

Q74ZG2              	100.00%		C4Y8M4              	100.00%
Bootstrap support for Q74ZG2 as seed ortholog is 100%.
Bootstrap support for C4Y8M4 as seed ortholog is 100%.

Group of orthologs #194. Best score 873 bits
Score difference with first non-orthologous sequence - A.gossypii:873 C.lusitaniae:873

Q756B7              	100.00%		C4YBD9              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for C4YBD9 as seed ortholog is 100%.

Group of orthologs #195. Best score 870 bits
Score difference with first non-orthologous sequence - A.gossypii:870 C.lusitaniae:870

Q75EI8              	100.00%		C4XY55              	100.00%
Bootstrap support for Q75EI8 as seed ortholog is 100%.
Bootstrap support for C4XY55 as seed ortholog is 100%.

Group of orthologs #196. Best score 869 bits
Score difference with first non-orthologous sequence - A.gossypii:869 C.lusitaniae:869

Q75EP8              	100.00%		C4YCK3              	100.00%
Bootstrap support for Q75EP8 as seed ortholog is 100%.
Bootstrap support for C4YCK3 as seed ortholog is 100%.

Group of orthologs #197. Best score 868 bits
Score difference with first non-orthologous sequence - A.gossypii:868 C.lusitaniae:868

Q74ZH9              	100.00%		C4Y2J8              	100.00%
Bootstrap support for Q74ZH9 as seed ortholog is 100%.
Bootstrap support for C4Y2J8 as seed ortholog is 100%.

Group of orthologs #198. Best score 868 bits
Score difference with first non-orthologous sequence - A.gossypii:868 C.lusitaniae:868

Q750Z9              	100.00%		C4YBA5              	100.00%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for C4YBA5 as seed ortholog is 100%.

Group of orthologs #199. Best score 868 bits
Score difference with first non-orthologous sequence - A.gossypii:773 C.lusitaniae:868

Q75FB3              	100.00%		C4Y429              	100.00%
Bootstrap support for Q75FB3 as seed ortholog is 100%.
Bootstrap support for C4Y429 as seed ortholog is 100%.

Group of orthologs #200. Best score 868 bits
Score difference with first non-orthologous sequence - A.gossypii:868 C.lusitaniae:868

Q75F90              	100.00%		C4Y7H9              	100.00%
Bootstrap support for Q75F90 as seed ortholog is 100%.
Bootstrap support for C4Y7H9 as seed ortholog is 100%.

Group of orthologs #201. Best score 867 bits
Score difference with first non-orthologous sequence - A.gossypii:867 C.lusitaniae:867

Q75C76              	100.00%		C4XWM4              	100.00%
Bootstrap support for Q75C76 as seed ortholog is 100%.
Bootstrap support for C4XWM4 as seed ortholog is 100%.

Group of orthologs #202. Best score 864 bits
Score difference with first non-orthologous sequence - A.gossypii:864 C.lusitaniae:864

P41752              	100.00%		C4XW55              	100.00%
Bootstrap support for P41752 as seed ortholog is 100%.
Bootstrap support for C4XW55 as seed ortholog is 100%.

Group of orthologs #203. Best score 864 bits
Score difference with first non-orthologous sequence - A.gossypii:864 C.lusitaniae:792

Q75B16              	100.00%		C4Y0Z0              	100.00%
Bootstrap support for Q75B16 as seed ortholog is 100%.
Bootstrap support for C4Y0Z0 as seed ortholog is 100%.

Group of orthologs #204. Best score 862 bits
Score difference with first non-orthologous sequence - A.gossypii:862 C.lusitaniae:862

Q750L7              	100.00%		C4XZG6              	100.00%
Bootstrap support for Q750L7 as seed ortholog is 100%.
Bootstrap support for C4XZG6 as seed ortholog is 100%.

Group of orthologs #205. Best score 862 bits
Score difference with first non-orthologous sequence - A.gossypii:520 C.lusitaniae:862

Q750J2              	100.00%		C4YC88              	100.00%
Bootstrap support for Q750J2 as seed ortholog is 100%.
Bootstrap support for C4YC88 as seed ortholog is 100%.

Group of orthologs #206. Best score 859 bits
Score difference with first non-orthologous sequence - A.gossypii:859 C.lusitaniae:859

Q751I0              	100.00%		C4XY48              	100.00%
Bootstrap support for Q751I0 as seed ortholog is 100%.
Bootstrap support for C4XY48 as seed ortholog is 100%.

Group of orthologs #207. Best score 857 bits
Score difference with first non-orthologous sequence - A.gossypii:332 C.lusitaniae:434

Q75CQ3              	100.00%		C4Y6M9              	100.00%
Q75F01              	33.88%		
Bootstrap support for Q75CQ3 as seed ortholog is 100%.
Bootstrap support for C4Y6M9 as seed ortholog is 100%.

Group of orthologs #208. Best score 856 bits
Score difference with first non-orthologous sequence - A.gossypii:856 C.lusitaniae:856

Q752V5              	100.00%		C4Y0C9              	100.00%
Bootstrap support for Q752V5 as seed ortholog is 100%.
Bootstrap support for C4Y0C9 as seed ortholog is 100%.

Group of orthologs #209. Best score 856 bits
Score difference with first non-orthologous sequence - A.gossypii:856 C.lusitaniae:856

Q757N3              	100.00%		C4Y0D3              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for C4Y0D3 as seed ortholog is 100%.

Group of orthologs #210. Best score 855 bits
Score difference with first non-orthologous sequence - A.gossypii:855 C.lusitaniae:855

Q753F9              	100.00%		C4Y7D5              	100.00%
Bootstrap support for Q753F9 as seed ortholog is 100%.
Bootstrap support for C4Y7D5 as seed ortholog is 100%.

Group of orthologs #211. Best score 855 bits
Score difference with first non-orthologous sequence - A.gossypii:855 C.lusitaniae:855

Q75D48              	100.00%		C4Y9U0              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for C4Y9U0 as seed ortholog is 100%.

Group of orthologs #212. Best score 854 bits
Score difference with first non-orthologous sequence - A.gossypii:854 C.lusitaniae:854

Q74Z87              	100.00%		C4Y0W1              	100.00%
Bootstrap support for Q74Z87 as seed ortholog is 100%.
Bootstrap support for C4Y0W1 as seed ortholog is 100%.

Group of orthologs #213. Best score 852 bits
Score difference with first non-orthologous sequence - A.gossypii:852 C.lusitaniae:852

Q75BV7              	100.00%		C4YB74              	100.00%
Bootstrap support for Q75BV7 as seed ortholog is 100%.
Bootstrap support for C4YB74 as seed ortholog is 100%.

Group of orthologs #214. Best score 851 bits
Score difference with first non-orthologous sequence - A.gossypii:851 C.lusitaniae:851

Q757V6              	100.00%		C4YAA0              	100.00%
Bootstrap support for Q757V6 as seed ortholog is 100%.
Bootstrap support for C4YAA0 as seed ortholog is 100%.

Group of orthologs #215. Best score 850 bits
Score difference with first non-orthologous sequence - A.gossypii:729 C.lusitaniae:850

Q758X0              	100.00%		C4XXD8              	100.00%
Bootstrap support for Q758X0 as seed ortholog is 100%.
Bootstrap support for C4XXD8 as seed ortholog is 100%.

Group of orthologs #216. Best score 846 bits
Score difference with first non-orthologous sequence - A.gossypii:846 C.lusitaniae:846

Q74Z89              	100.00%		C4Y0V5              	100.00%
Bootstrap support for Q74Z89 as seed ortholog is 100%.
Bootstrap support for C4Y0V5 as seed ortholog is 100%.

Group of orthologs #217. Best score 846 bits
Score difference with first non-orthologous sequence - A.gossypii:400 C.lusitaniae:306

Q752A6              	100.00%		C4Y222              	100.00%
Bootstrap support for Q752A6 as seed ortholog is 100%.
Bootstrap support for C4Y222 as seed ortholog is 100%.

Group of orthologs #218. Best score 843 bits
Score difference with first non-orthologous sequence - A.gossypii:843 C.lusitaniae:602

Q754N7              	100.00%		C4XYV0              	100.00%
Bootstrap support for Q754N7 as seed ortholog is 100%.
Bootstrap support for C4XYV0 as seed ortholog is 100%.

Group of orthologs #219. Best score 842 bits
Score difference with first non-orthologous sequence - A.gossypii:542 C.lusitaniae:842

Q757S7              	100.00%		C4Y1G8              	100.00%
Bootstrap support for Q757S7 as seed ortholog is 100%.
Bootstrap support for C4Y1G8 as seed ortholog is 100%.

Group of orthologs #220. Best score 841 bits
Score difference with first non-orthologous sequence - A.gossypii:841 C.lusitaniae:841

Q751L7              	100.00%		C4Y125              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for C4Y125 as seed ortholog is 100%.

Group of orthologs #221. Best score 839 bits
Score difference with first non-orthologous sequence - A.gossypii:839 C.lusitaniae:839

Q755E1              	100.00%		C4Y1F5              	100.00%
Bootstrap support for Q755E1 as seed ortholog is 100%.
Bootstrap support for C4Y1F5 as seed ortholog is 100%.

Group of orthologs #222. Best score 837 bits
Score difference with first non-orthologous sequence - A.gossypii:837 C.lusitaniae:837

Q753A6              	100.00%		C4Y8V1              	100.00%
Bootstrap support for Q753A6 as seed ortholog is 100%.
Bootstrap support for C4Y8V1 as seed ortholog is 100%.

Group of orthologs #223. Best score 831 bits
Score difference with first non-orthologous sequence - A.gossypii:831 C.lusitaniae:831

Q75DQ8              	100.00%		C4Y5J8              	100.00%
Bootstrap support for Q75DQ8 as seed ortholog is 100%.
Bootstrap support for C4Y5J8 as seed ortholog is 100%.

Group of orthologs #224. Best score 829 bits
Score difference with first non-orthologous sequence - A.gossypii:829 C.lusitaniae:829

Q753M0              	100.00%		C4Y751              	100.00%
Bootstrap support for Q753M0 as seed ortholog is 100%.
Bootstrap support for C4Y751 as seed ortholog is 100%.

Group of orthologs #225. Best score 828 bits
Score difference with first non-orthologous sequence - A.gossypii:828 C.lusitaniae:828

Q750L4              	100.00%		C4Y229              	100.00%
Bootstrap support for Q750L4 as seed ortholog is 100%.
Bootstrap support for C4Y229 as seed ortholog is 100%.

Group of orthologs #226. Best score 828 bits
Score difference with first non-orthologous sequence - A.gossypii:828 C.lusitaniae:828

Q75B31              	100.00%		C4Y6Z1              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for C4Y6Z1 as seed ortholog is 100%.

Group of orthologs #227. Best score 827 bits
Score difference with first non-orthologous sequence - A.gossypii:827 C.lusitaniae:827

Q74ZS2              	100.00%		C4Y7W7              	100.00%
Bootstrap support for Q74ZS2 as seed ortholog is 100%.
Bootstrap support for C4Y7W7 as seed ortholog is 100%.

Group of orthologs #228. Best score 826 bits
Score difference with first non-orthologous sequence - A.gossypii:826 C.lusitaniae:826

Q75EQ4              	100.00%		C4Y1C8              	100.00%
Bootstrap support for Q75EQ4 as seed ortholog is 100%.
Bootstrap support for C4Y1C8 as seed ortholog is 100%.

Group of orthologs #229. Best score 825 bits
Score difference with first non-orthologous sequence - A.gossypii:736 C.lusitaniae:825

Q750P4              	100.00%		C4XWI6              	100.00%
Bootstrap support for Q750P4 as seed ortholog is 100%.
Bootstrap support for C4XWI6 as seed ortholog is 100%.

Group of orthologs #230. Best score 825 bits
Score difference with first non-orthologous sequence - A.gossypii:825 C.lusitaniae:825

Q752A1              	100.00%		C4Y965              	100.00%
Bootstrap support for Q752A1 as seed ortholog is 100%.
Bootstrap support for C4Y965 as seed ortholog is 100%.

Group of orthologs #231. Best score 822 bits
Score difference with first non-orthologous sequence - A.gossypii:822 C.lusitaniae:822

Q750T4              	100.00%		C4Y7J9              	100.00%
Bootstrap support for Q750T4 as seed ortholog is 100%.
Bootstrap support for C4Y7J9 as seed ortholog is 100%.

Group of orthologs #232. Best score 819 bits
Score difference with first non-orthologous sequence - A.gossypii:819 C.lusitaniae:819

Q754Q2              	100.00%		C4Y2W5              	100.00%
Bootstrap support for Q754Q2 as seed ortholog is 100%.
Bootstrap support for C4Y2W5 as seed ortholog is 100%.

Group of orthologs #233. Best score 818 bits
Score difference with first non-orthologous sequence - A.gossypii:818 C.lusitaniae:818

Q755X1              	100.00%		C4Y464              	100.00%
Bootstrap support for Q755X1 as seed ortholog is 100%.
Bootstrap support for C4Y464 as seed ortholog is 100%.

Group of orthologs #234. Best score 817 bits
Score difference with first non-orthologous sequence - A.gossypii:817 C.lusitaniae:817

Q75AF7              	100.00%		C4XY98              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 100%.
Bootstrap support for C4XY98 as seed ortholog is 100%.

Group of orthologs #235. Best score 810 bits
Score difference with first non-orthologous sequence - A.gossypii:810 C.lusitaniae:810

Q757H0              	100.00%		C4Y2K5              	100.00%
Bootstrap support for Q757H0 as seed ortholog is 100%.
Bootstrap support for C4Y2K5 as seed ortholog is 100%.

Group of orthologs #236. Best score 809 bits
Score difference with first non-orthologous sequence - A.gossypii:809 C.lusitaniae:809

Q75A36              	100.00%		C4XWM7              	100.00%
Bootstrap support for Q75A36 as seed ortholog is 100%.
Bootstrap support for C4XWM7 as seed ortholog is 100%.

Group of orthologs #237. Best score 805 bits
Score difference with first non-orthologous sequence - A.gossypii:805 C.lusitaniae:805

Q755V3              	100.00%		C4XY99              	100.00%
Bootstrap support for Q755V3 as seed ortholog is 100%.
Bootstrap support for C4XY99 as seed ortholog is 100%.

Group of orthologs #238. Best score 804 bits
Score difference with first non-orthologous sequence - A.gossypii:804 C.lusitaniae:804

Q75DB8              	100.00%		C4Y4Q0              	100.00%
Bootstrap support for Q75DB8 as seed ortholog is 100%.
Bootstrap support for C4Y4Q0 as seed ortholog is 100%.

Group of orthologs #239. Best score 803 bits
Score difference with first non-orthologous sequence - A.gossypii:803 C.lusitaniae:803

Q758F2              	100.00%		C4XX51              	100.00%
Bootstrap support for Q758F2 as seed ortholog is 100%.
Bootstrap support for C4XX51 as seed ortholog is 100%.

Group of orthologs #240. Best score 803 bits
Score difference with first non-orthologous sequence - A.gossypii:803 C.lusitaniae:803

Q75DM3              	100.00%		C4XYX4              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for C4XYX4 as seed ortholog is 100%.

Group of orthologs #241. Best score 803 bits
Score difference with first non-orthologous sequence - A.gossypii:803 C.lusitaniae:803

Q754E1              	100.00%		C4Y7R6              	100.00%
Bootstrap support for Q754E1 as seed ortholog is 100%.
Bootstrap support for C4Y7R6 as seed ortholog is 100%.

Group of orthologs #242. Best score 800 bits
Score difference with first non-orthologous sequence - A.gossypii:800 C.lusitaniae:800

Q756V3              	100.00%		C4XYD3              	100.00%
Bootstrap support for Q756V3 as seed ortholog is 100%.
Bootstrap support for C4XYD3 as seed ortholog is 100%.

Group of orthologs #243. Best score 799 bits
Score difference with first non-orthologous sequence - A.gossypii:799 C.lusitaniae:799

Q75BQ3              	100.00%		C4Y8A4              	100.00%
Bootstrap support for Q75BQ3 as seed ortholog is 100%.
Bootstrap support for C4Y8A4 as seed ortholog is 100%.

Group of orthologs #244. Best score 799 bits
Score difference with first non-orthologous sequence - A.gossypii:799 C.lusitaniae:799

Q75F95              	100.00%		C4Y9G3              	100.00%
Bootstrap support for Q75F95 as seed ortholog is 100%.
Bootstrap support for C4Y9G3 as seed ortholog is 100%.

Group of orthologs #245. Best score 799 bits
Score difference with first non-orthologous sequence - A.gossypii:799 C.lusitaniae:799

Q75EU2              	100.00%		C4YAC0              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for C4YAC0 as seed ortholog is 100%.

Group of orthologs #246. Best score 798 bits
Score difference with first non-orthologous sequence - A.gossypii:798 C.lusitaniae:798

Q75CE4              	100.00%		C4Y4Y6              	100.00%
Bootstrap support for Q75CE4 as seed ortholog is 100%.
Bootstrap support for C4Y4Y6 as seed ortholog is 100%.

Group of orthologs #247. Best score 797 bits
Score difference with first non-orthologous sequence - A.gossypii:797 C.lusitaniae:797

Q753I4              	100.00%		C4XXT9              	100.00%
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for C4XXT9 as seed ortholog is 100%.

Group of orthologs #248. Best score 797 bits
Score difference with first non-orthologous sequence - A.gossypii:797 C.lusitaniae:797

Q754K5              	100.00%		C4Y9M5              	100.00%
Bootstrap support for Q754K5 as seed ortholog is 100%.
Bootstrap support for C4Y9M5 as seed ortholog is 100%.

Group of orthologs #249. Best score 795 bits
Score difference with first non-orthologous sequence - A.gossypii:795 C.lusitaniae:795

Q758Z0              	100.00%		C4XY41              	100.00%
Bootstrap support for Q758Z0 as seed ortholog is 100%.
Bootstrap support for C4XY41 as seed ortholog is 100%.

Group of orthologs #250. Best score 795 bits
Score difference with first non-orthologous sequence - A.gossypii:795 C.lusitaniae:795

Q75B50              	100.00%		C4Y0C5              	100.00%
Bootstrap support for Q75B50 as seed ortholog is 100%.
Bootstrap support for C4Y0C5 as seed ortholog is 100%.

Group of orthologs #251. Best score 792 bits
Score difference with first non-orthologous sequence - A.gossypii:792 C.lusitaniae:792

Q74Z73              	100.00%		C4Y0T9              	100.00%
Bootstrap support for Q74Z73 as seed ortholog is 100%.
Bootstrap support for C4Y0T9 as seed ortholog is 100%.

Group of orthologs #252. Best score 791 bits
Score difference with first non-orthologous sequence - A.gossypii:791 C.lusitaniae:791

Q751P6              	100.00%		C4Y350              	100.00%
Bootstrap support for Q751P6 as seed ortholog is 100%.
Bootstrap support for C4Y350 as seed ortholog is 100%.

Group of orthologs #253. Best score 789 bits
Score difference with first non-orthologous sequence - A.gossypii:789 C.lusitaniae:789

Q752D9              	100.00%		C4Y1Z6              	100.00%
Bootstrap support for Q752D9 as seed ortholog is 100%.
Bootstrap support for C4Y1Z6 as seed ortholog is 100%.

Group of orthologs #254. Best score 787 bits
Score difference with first non-orthologous sequence - A.gossypii:787 C.lusitaniae:787

Q751N2              	100.00%		C4Y6M8              	100.00%
Bootstrap support for Q751N2 as seed ortholog is 100%.
Bootstrap support for C4Y6M8 as seed ortholog is 100%.

Group of orthologs #255. Best score 787 bits
Score difference with first non-orthologous sequence - A.gossypii:787 C.lusitaniae:787

Q75F27              	100.00%		C4Y6E5              	100.00%
Bootstrap support for Q75F27 as seed ortholog is 100%.
Bootstrap support for C4Y6E5 as seed ortholog is 100%.

Group of orthologs #256. Best score 786 bits
Score difference with first non-orthologous sequence - A.gossypii:786 C.lusitaniae:786

Q752M9              	100.00%		C4Y168              	100.00%
                    	       		C4Y169              	35.48%
Bootstrap support for Q752M9 as seed ortholog is 100%.
Bootstrap support for C4Y168 as seed ortholog is 100%.

Group of orthologs #257. Best score 785 bits
Score difference with first non-orthologous sequence - A.gossypii:785 C.lusitaniae:785

Q74Z12              	100.00%		C4Y0M5              	100.00%
Bootstrap support for Q74Z12 as seed ortholog is 100%.
Bootstrap support for C4Y0M5 as seed ortholog is 100%.

Group of orthologs #258. Best score 785 bits
Score difference with first non-orthologous sequence - A.gossypii:785 C.lusitaniae:335

Q75DI2              	100.00%		C4XWX0              	100.00%
Bootstrap support for Q75DI2 as seed ortholog is 100%.
Bootstrap support for C4XWX0 as seed ortholog is 100%.

Group of orthologs #259. Best score 784 bits
Score difference with first non-orthologous sequence - A.gossypii:784 C.lusitaniae:784

Q75F08              	100.00%		C4Y7E8              	100.00%
Bootstrap support for Q75F08 as seed ortholog is 100%.
Bootstrap support for C4Y7E8 as seed ortholog is 100%.

Group of orthologs #260. Best score 783 bits
Score difference with first non-orthologous sequence - A.gossypii:699 C.lusitaniae:783

Q750H4              	100.00%		C4Y3W5              	100.00%
Bootstrap support for Q750H4 as seed ortholog is 100%.
Bootstrap support for C4Y3W5 as seed ortholog is 100%.

Group of orthologs #261. Best score 783 bits
Score difference with first non-orthologous sequence - A.gossypii:783 C.lusitaniae:783

Q754T2              	100.00%		C4Y2M2              	100.00%
Bootstrap support for Q754T2 as seed ortholog is 100%.
Bootstrap support for C4Y2M2 as seed ortholog is 100%.

Group of orthologs #262. Best score 783 bits
Score difference with first non-orthologous sequence - A.gossypii:783 C.lusitaniae:783

Q74Z21              	100.00%		C4YA94              	100.00%
Bootstrap support for Q74Z21 as seed ortholog is 100%.
Bootstrap support for C4YA94 as seed ortholog is 100%.

Group of orthologs #263. Best score 782 bits
Score difference with first non-orthologous sequence - A.gossypii:782 C.lusitaniae:782

Q751B1              	100.00%		C4Y165              	100.00%
Bootstrap support for Q751B1 as seed ortholog is 100%.
Bootstrap support for C4Y165 as seed ortholog is 100%.

Group of orthologs #264. Best score 781 bits
Score difference with first non-orthologous sequence - A.gossypii:781 C.lusitaniae:781

Q75BQ6              	100.00%		C4Y1L9              	100.00%
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for C4Y1L9 as seed ortholog is 100%.

Group of orthologs #265. Best score 779 bits
Score difference with first non-orthologous sequence - A.gossypii:779 C.lusitaniae:779

Q756G7              	100.00%		C4Y4A6              	100.00%
Bootstrap support for Q756G7 as seed ortholog is 100%.
Bootstrap support for C4Y4A6 as seed ortholog is 100%.

Group of orthologs #266. Best score 779 bits
Score difference with first non-orthologous sequence - A.gossypii:779 C.lusitaniae:779

Q756S9              	100.00%		C4Y6V4              	100.00%
Bootstrap support for Q756S9 as seed ortholog is 100%.
Bootstrap support for C4Y6V4 as seed ortholog is 100%.

Group of orthologs #267. Best score 778 bits
Score difference with first non-orthologous sequence - A.gossypii:778 C.lusitaniae:778

Q755P2              	100.00%		C4Y5K7              	100.00%
Bootstrap support for Q755P2 as seed ortholog is 100%.
Bootstrap support for C4Y5K7 as seed ortholog is 100%.

Group of orthologs #268. Best score 774 bits
Score difference with first non-orthologous sequence - A.gossypii:774 C.lusitaniae:774

Q75AD2              	100.00%		C4XX33              	100.00%
Bootstrap support for Q75AD2 as seed ortholog is 100%.
Bootstrap support for C4XX33 as seed ortholog is 100%.

Group of orthologs #269. Best score 774 bits
Score difference with first non-orthologous sequence - A.gossypii:774 C.lusitaniae:774

Q75E20              	100.00%		C4Y137              	100.00%
Bootstrap support for Q75E20 as seed ortholog is 100%.
Bootstrap support for C4Y137 as seed ortholog is 100%.

Group of orthologs #270. Best score 774 bits
Score difference with first non-orthologous sequence - A.gossypii:774 C.lusitaniae:774

Q75DN5              	100.00%		C4YCE9              	100.00%
Bootstrap support for Q75DN5 as seed ortholog is 100%.
Bootstrap support for C4YCE9 as seed ortholog is 100%.

Group of orthologs #271. Best score 773 bits
Score difference with first non-orthologous sequence - A.gossypii:773 C.lusitaniae:773

Q752H0              	100.00%		C4Y2D7              	100.00%
Bootstrap support for Q752H0 as seed ortholog is 100%.
Bootstrap support for C4Y2D7 as seed ortholog is 100%.

Group of orthologs #272. Best score 772 bits
Score difference with first non-orthologous sequence - A.gossypii:772 C.lusitaniae:725

Q756W4              	100.00%		C4Y4I6              	100.00%
Bootstrap support for Q756W4 as seed ortholog is 100%.
Bootstrap support for C4Y4I6 as seed ortholog is 100%.

Group of orthologs #273. Best score 771 bits
Score difference with first non-orthologous sequence - A.gossypii:771 C.lusitaniae:771

Q751H8              	100.00%		C4XZ44              	100.00%
Bootstrap support for Q751H8 as seed ortholog is 100%.
Bootstrap support for C4XZ44 as seed ortholog is 100%.

Group of orthologs #274. Best score 771 bits
Score difference with first non-orthologous sequence - A.gossypii:771 C.lusitaniae:771

Q75BR1              	100.00%		C4Y916              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for C4Y916 as seed ortholog is 100%.

Group of orthologs #275. Best score 770 bits
Score difference with first non-orthologous sequence - A.gossypii:770 C.lusitaniae:770

Q759U6              	100.00%		C4Y4J9              	100.00%
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for C4Y4J9 as seed ortholog is 100%.

Group of orthologs #276. Best score 769 bits
Score difference with first non-orthologous sequence - A.gossypii:769 C.lusitaniae:769

Q74Z37              	100.00%		C4Y6H9              	100.00%
Bootstrap support for Q74Z37 as seed ortholog is 100%.
Bootstrap support for C4Y6H9 as seed ortholog is 100%.

Group of orthologs #277. Best score 769 bits
Score difference with first non-orthologous sequence - A.gossypii:769 C.lusitaniae:769

Q74ZC0              	100.00%		C4Y8M0              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for C4Y8M0 as seed ortholog is 100%.

Group of orthologs #278. Best score 768 bits
Score difference with first non-orthologous sequence - A.gossypii:768 C.lusitaniae:768

Q75CR3              	100.00%		C4YCC5              	100.00%
Bootstrap support for Q75CR3 as seed ortholog is 100%.
Bootstrap support for C4YCC5 as seed ortholog is 100%.

Group of orthologs #279. Best score 767 bits
Score difference with first non-orthologous sequence - A.gossypii:767 C.lusitaniae:767

Q755C2              	100.00%		C4YAE7              	100.00%
Bootstrap support for Q755C2 as seed ortholog is 100%.
Bootstrap support for C4YAE7 as seed ortholog is 100%.

Group of orthologs #280. Best score 765 bits
Score difference with first non-orthologous sequence - A.gossypii:765 C.lusitaniae:765

Q753T3              	100.00%		C4Y0X4              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for C4Y0X4 as seed ortholog is 100%.

Group of orthologs #281. Best score 765 bits
Score difference with first non-orthologous sequence - A.gossypii:765 C.lusitaniae:765

Q757N2              	100.00%		C4Y0D2              	100.00%
Bootstrap support for Q757N2 as seed ortholog is 100%.
Bootstrap support for C4Y0D2 as seed ortholog is 100%.

Group of orthologs #282. Best score 764 bits
Score difference with first non-orthologous sequence - A.gossypii:683 C.lusitaniae:764

Q758J2              	100.00%		C4Y9B9              	100.00%
Bootstrap support for Q758J2 as seed ortholog is 100%.
Bootstrap support for C4Y9B9 as seed ortholog is 100%.

Group of orthologs #283. Best score 763 bits
Score difference with first non-orthologous sequence - A.gossypii:763 C.lusitaniae:763

Q757G2              	100.00%		C4Y3F5              	100.00%
Bootstrap support for Q757G2 as seed ortholog is 100%.
Bootstrap support for C4Y3F5 as seed ortholog is 100%.

Group of orthologs #284. Best score 763 bits
Score difference with first non-orthologous sequence - A.gossypii:622 C.lusitaniae:652

Q75EZ9              	100.00%		C4Y0T4              	100.00%
Bootstrap support for Q75EZ9 as seed ortholog is 100%.
Bootstrap support for C4Y0T4 as seed ortholog is 100%.

Group of orthologs #285. Best score 763 bits
Score difference with first non-orthologous sequence - A.gossypii:763 C.lusitaniae:763

Q75DW1              	100.00%		C4Y432              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 100%.
Bootstrap support for C4Y432 as seed ortholog is 100%.

Group of orthologs #286. Best score 762 bits
Score difference with first non-orthologous sequence - A.gossypii:762 C.lusitaniae:762

Q75BF3              	100.00%		C4Y7W5              	100.00%
Bootstrap support for Q75BF3 as seed ortholog is 100%.
Bootstrap support for C4Y7W5 as seed ortholog is 100%.

Group of orthologs #287. Best score 761 bits
Score difference with first non-orthologous sequence - A.gossypii:761 C.lusitaniae:761

Q751Z4              	100.00%		C4Y790              	100.00%
Bootstrap support for Q751Z4 as seed ortholog is 100%.
Bootstrap support for C4Y790 as seed ortholog is 100%.

Group of orthologs #288. Best score 760 bits
Score difference with first non-orthologous sequence - A.gossypii:760 C.lusitaniae:760

Q75D54              	100.00%		C4XWF5              	100.00%
Bootstrap support for Q75D54 as seed ortholog is 100%.
Bootstrap support for C4XWF5 as seed ortholog is 100%.

Group of orthologs #289. Best score 758 bits
Score difference with first non-orthologous sequence - A.gossypii:758 C.lusitaniae:758

Q757R0              	100.00%		C4XVN0              	100.00%
Bootstrap support for Q757R0 as seed ortholog is 100%.
Bootstrap support for C4XVN0 as seed ortholog is 100%.

Group of orthologs #290. Best score 756 bits
Score difference with first non-orthologous sequence - A.gossypii:756 C.lusitaniae:756

Q759P9              	100.00%		C4Y9X6              	100.00%
Bootstrap support for Q759P9 as seed ortholog is 100%.
Bootstrap support for C4Y9X6 as seed ortholog is 100%.

Group of orthologs #291. Best score 755 bits
Score difference with first non-orthologous sequence - A.gossypii:755 C.lusitaniae:755

Q757L1              	100.00%		C4Y823              	100.00%
Bootstrap support for Q757L1 as seed ortholog is 100%.
Bootstrap support for C4Y823 as seed ortholog is 100%.

Group of orthologs #292. Best score 746 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.lusitaniae:318

Q759I8              	100.00%		C4Y523              	100.00%
Bootstrap support for Q759I8 as seed ortholog is 88%.
Bootstrap support for C4Y523 as seed ortholog is 100%.

Group of orthologs #293. Best score 745 bits
Score difference with first non-orthologous sequence - A.gossypii:745 C.lusitaniae:745

Q75C15              	100.00%		C4XYQ2              	100.00%
Bootstrap support for Q75C15 as seed ortholog is 100%.
Bootstrap support for C4XYQ2 as seed ortholog is 100%.

Group of orthologs #294. Best score 745 bits
Score difference with first non-orthologous sequence - A.gossypii:745 C.lusitaniae:745

Q75CS4              	100.00%		C4XZG8              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for C4XZG8 as seed ortholog is 100%.

Group of orthologs #295. Best score 743 bits
Score difference with first non-orthologous sequence - A.gossypii:743 C.lusitaniae:743

Q750R3              	100.00%		C4Y389              	100.00%
Bootstrap support for Q750R3 as seed ortholog is 100%.
Bootstrap support for C4Y389 as seed ortholog is 100%.

Group of orthologs #296. Best score 743 bits
Score difference with first non-orthologous sequence - A.gossypii:743 C.lusitaniae:743

Q756T4              	100.00%		C4Y610              	100.00%
Bootstrap support for Q756T4 as seed ortholog is 100%.
Bootstrap support for C4Y610 as seed ortholog is 100%.

Group of orthologs #297. Best score 743 bits
Score difference with first non-orthologous sequence - A.gossypii:743 C.lusitaniae:743

Q75EA4              	100.00%		C4Y5I2              	100.00%
Bootstrap support for Q75EA4 as seed ortholog is 100%.
Bootstrap support for C4Y5I2 as seed ortholog is 100%.

Group of orthologs #298. Best score 742 bits
Score difference with first non-orthologous sequence - A.gossypii:742 C.lusitaniae:742

Q74ZY1              	100.00%		C4Y196              	100.00%
Bootstrap support for Q74ZY1 as seed ortholog is 100%.
Bootstrap support for C4Y196 as seed ortholog is 100%.

Group of orthologs #299. Best score 741 bits
Score difference with first non-orthologous sequence - A.gossypii:741 C.lusitaniae:741

Q751X2              	100.00%		C4Y9Q9              	100.00%
Bootstrap support for Q751X2 as seed ortholog is 100%.
Bootstrap support for C4Y9Q9 as seed ortholog is 100%.

Group of orthologs #300. Best score 739 bits
Score difference with first non-orthologous sequence - A.gossypii:739 C.lusitaniae:739

Q758I6              	100.00%		C4Y3Z5              	100.00%
Bootstrap support for Q758I6 as seed ortholog is 100%.
Bootstrap support for C4Y3Z5 as seed ortholog is 100%.

Group of orthologs #301. Best score 739 bits
Score difference with first non-orthologous sequence - A.gossypii:739 C.lusitaniae:739

Q75C66              	100.00%		C4Y5E3              	100.00%
Bootstrap support for Q75C66 as seed ortholog is 100%.
Bootstrap support for C4Y5E3 as seed ortholog is 100%.

Group of orthologs #302. Best score 737 bits
Score difference with first non-orthologous sequence - A.gossypii:737 C.lusitaniae:737

Q751A1              	100.00%		C4Y3P9              	100.00%
Bootstrap support for Q751A1 as seed ortholog is 100%.
Bootstrap support for C4Y3P9 as seed ortholog is 100%.

Group of orthologs #303. Best score 737 bits
Score difference with first non-orthologous sequence - A.gossypii:737 C.lusitaniae:737

Q75BE2              	100.00%		C4XXR9              	100.00%
Bootstrap support for Q75BE2 as seed ortholog is 100%.
Bootstrap support for C4XXR9 as seed ortholog is 100%.

Group of orthologs #304. Best score 737 bits
Score difference with first non-orthologous sequence - A.gossypii:737 C.lusitaniae:737

Q753Z3              	100.00%		C4YBR2              	100.00%
Bootstrap support for Q753Z3 as seed ortholog is 100%.
Bootstrap support for C4YBR2 as seed ortholog is 100%.

Group of orthologs #305. Best score 736 bits
Score difference with first non-orthologous sequence - A.gossypii:736 C.lusitaniae:536

Q753M8              	100.00%		C4Y3E2              	100.00%
Bootstrap support for Q753M8 as seed ortholog is 100%.
Bootstrap support for C4Y3E2 as seed ortholog is 100%.

Group of orthologs #306. Best score 735 bits
Score difference with first non-orthologous sequence - A.gossypii:735 C.lusitaniae:735

Q759Z6              	100.00%		C4XXT6              	100.00%
Bootstrap support for Q759Z6 as seed ortholog is 100%.
Bootstrap support for C4XXT6 as seed ortholog is 100%.

Group of orthologs #307. Best score 735 bits
Score difference with first non-orthologous sequence - A.gossypii:735 C.lusitaniae:735

Q757E6              	100.00%		C4Y2S0              	100.00%
Bootstrap support for Q757E6 as seed ortholog is 100%.
Bootstrap support for C4Y2S0 as seed ortholog is 100%.

Group of orthologs #308. Best score 735 bits
Score difference with first non-orthologous sequence - A.gossypii:735 C.lusitaniae:735

Q75CI1              	100.00%		C4YAP5              	100.00%
Bootstrap support for Q75CI1 as seed ortholog is 100%.
Bootstrap support for C4YAP5 as seed ortholog is 100%.

Group of orthologs #309. Best score 734 bits
Score difference with first non-orthologous sequence - A.gossypii:734 C.lusitaniae:734

Q754V9              	100.00%		C4Y3M8              	100.00%
Bootstrap support for Q754V9 as seed ortholog is 100%.
Bootstrap support for C4Y3M8 as seed ortholog is 100%.

Group of orthologs #310. Best score 731 bits
Score difference with first non-orthologous sequence - A.gossypii:731 C.lusitaniae:731

Q75A83              	100.00%		C4Y1Z3              	100.00%
Bootstrap support for Q75A83 as seed ortholog is 100%.
Bootstrap support for C4Y1Z3 as seed ortholog is 100%.

Group of orthologs #311. Best score 730 bits
Score difference with first non-orthologous sequence - A.gossypii:730 C.lusitaniae:730

Q757G0              	100.00%		C4Y1U6              	100.00%
Bootstrap support for Q757G0 as seed ortholog is 100%.
Bootstrap support for C4Y1U6 as seed ortholog is 100%.

Group of orthologs #312. Best score 730 bits
Score difference with first non-orthologous sequence - A.gossypii:730 C.lusitaniae:730

Q75DP6              	100.00%		C4XWV0              	100.00%
Bootstrap support for Q75DP6 as seed ortholog is 100%.
Bootstrap support for C4XWV0 as seed ortholog is 100%.

Group of orthologs #313. Best score 727 bits
Score difference with first non-orthologous sequence - A.gossypii:727 C.lusitaniae:727

Q75A20              	100.00%		C4XZ37              	100.00%
                    	       		C4YAG2              	6.44%
Bootstrap support for Q75A20 as seed ortholog is 100%.
Bootstrap support for C4XZ37 as seed ortholog is 100%.

Group of orthologs #314. Best score 726 bits
Score difference with first non-orthologous sequence - A.gossypii:726 C.lusitaniae:726

Q75CE3              	100.00%		C4Y5T6              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for C4Y5T6 as seed ortholog is 100%.

Group of orthologs #315. Best score 724 bits
Score difference with first non-orthologous sequence - A.gossypii:724 C.lusitaniae:724

Q759J0              	100.00%		C4XXP9              	100.00%
Bootstrap support for Q759J0 as seed ortholog is 100%.
Bootstrap support for C4XXP9 as seed ortholog is 100%.

Group of orthologs #316. Best score 724 bits
Score difference with first non-orthologous sequence - A.gossypii:724 C.lusitaniae:724

Q753S1              	100.00%		C4YC65              	100.00%
Bootstrap support for Q753S1 as seed ortholog is 100%.
Bootstrap support for C4YC65 as seed ortholog is 100%.

Group of orthologs #317. Best score 722 bits
Score difference with first non-orthologous sequence - A.gossypii:722 C.lusitaniae:722

Q75BS4              	100.00%		C4Y4U3              	100.00%
Bootstrap support for Q75BS4 as seed ortholog is 100%.
Bootstrap support for C4Y4U3 as seed ortholog is 100%.

Group of orthologs #318. Best score 722 bits
Score difference with first non-orthologous sequence - A.gossypii:722 C.lusitaniae:722

Q753N3              	100.00%		C4YBJ6              	100.00%
Bootstrap support for Q753N3 as seed ortholog is 100%.
Bootstrap support for C4YBJ6 as seed ortholog is 100%.

Group of orthologs #319. Best score 721 bits
Score difference with first non-orthologous sequence - A.gossypii:386 C.lusitaniae:721

Q75BI5              	100.00%		C4XYP6              	100.00%
Bootstrap support for Q75BI5 as seed ortholog is 100%.
Bootstrap support for C4XYP6 as seed ortholog is 100%.

Group of orthologs #320. Best score 721 bits
Score difference with first non-orthologous sequence - A.gossypii:669 C.lusitaniae:643

Q752Y1              	100.00%		C4Y9L9              	100.00%
Bootstrap support for Q752Y1 as seed ortholog is 100%.
Bootstrap support for C4Y9L9 as seed ortholog is 100%.

Group of orthologs #321. Best score 720 bits
Score difference with first non-orthologous sequence - A.gossypii:720 C.lusitaniae:720

Q755I2              	100.00%		C4XW78              	100.00%
Bootstrap support for Q755I2 as seed ortholog is 100%.
Bootstrap support for C4XW78 as seed ortholog is 100%.

Group of orthologs #322. Best score 720 bits
Score difference with first non-orthologous sequence - A.gossypii:554 C.lusitaniae:383

Q759Y4              	100.00%		C4XYJ7              	100.00%
Bootstrap support for Q759Y4 as seed ortholog is 100%.
Bootstrap support for C4XYJ7 as seed ortholog is 100%.

Group of orthologs #323. Best score 720 bits
Score difference with first non-orthologous sequence - A.gossypii:720 C.lusitaniae:720

Q75E23              	100.00%		C4XZF5              	100.00%
Bootstrap support for Q75E23 as seed ortholog is 100%.
Bootstrap support for C4XZF5 as seed ortholog is 100%.

Group of orthologs #324. Best score 719 bits
Score difference with first non-orthologous sequence - A.gossypii:719 C.lusitaniae:719

Q753H8              	100.00%		C4XVW5              	100.00%
Bootstrap support for Q753H8 as seed ortholog is 100%.
Bootstrap support for C4XVW5 as seed ortholog is 100%.

Group of orthologs #325. Best score 718 bits
Score difference with first non-orthologous sequence - A.gossypii:718 C.lusitaniae:718

Q756F8              	100.00%		C4Y053              	100.00%
Bootstrap support for Q756F8 as seed ortholog is 100%.
Bootstrap support for C4Y053 as seed ortholog is 100%.

Group of orthologs #326. Best score 717 bits
Score difference with first non-orthologous sequence - A.gossypii:717 C.lusitaniae:360

Q75BG1              	100.00%		C4Y2J5              	100.00%
Q75CX1              	71.74%		C4Y2I5              	73.05%
Q750H8              	20.70%		C4Y5J2              	13.21%
Bootstrap support for Q75BG1 as seed ortholog is 100%.
Bootstrap support for C4Y2J5 as seed ortholog is 100%.

Group of orthologs #327. Best score 717 bits
Score difference with first non-orthologous sequence - A.gossypii:717 C.lusitaniae:717

Q751N1              	100.00%		C4Y4U2              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for C4Y4U2 as seed ortholog is 100%.

Group of orthologs #328. Best score 717 bits
Score difference with first non-orthologous sequence - A.gossypii:717 C.lusitaniae:717

Q758F5              	100.00%		C4Y2I1              	100.00%
Bootstrap support for Q758F5 as seed ortholog is 100%.
Bootstrap support for C4Y2I1 as seed ortholog is 100%.

Group of orthologs #329. Best score 716 bits
Score difference with first non-orthologous sequence - A.gossypii:716 C.lusitaniae:716

Q757M5              	100.00%		C4Y6K0              	100.00%
Bootstrap support for Q757M5 as seed ortholog is 100%.
Bootstrap support for C4Y6K0 as seed ortholog is 100%.

Group of orthologs #330. Best score 715 bits
Score difference with first non-orthologous sequence - A.gossypii:715 C.lusitaniae:715

Q75AA7              	100.00%		C4XYN1              	100.00%
Bootstrap support for Q75AA7 as seed ortholog is 100%.
Bootstrap support for C4XYN1 as seed ortholog is 100%.

Group of orthologs #331. Best score 713 bits
Score difference with first non-orthologous sequence - A.gossypii:713 C.lusitaniae:713

Q755K6              	100.00%		C4Y3R9              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for C4Y3R9 as seed ortholog is 100%.

Group of orthologs #332. Best score 712 bits
Score difference with first non-orthologous sequence - A.gossypii:72 C.lusitaniae:229

Q759Z1              	100.00%		C4Y033              	100.00%
Bootstrap support for Q759Z1 as seed ortholog is 92%.
Bootstrap support for C4Y033 as seed ortholog is 100%.

Group of orthologs #333. Best score 711 bits
Score difference with first non-orthologous sequence - A.gossypii:711 C.lusitaniae:711

Q75AV9              	100.00%		C4Y5N8              	100.00%
Bootstrap support for Q75AV9 as seed ortholog is 100%.
Bootstrap support for C4Y5N8 as seed ortholog is 100%.

Group of orthologs #334. Best score 711 bits
Score difference with first non-orthologous sequence - A.gossypii:516 C.lusitaniae:541

Q75F03              	100.00%		C4Y8S9              	100.00%
Bootstrap support for Q75F03 as seed ortholog is 100%.
Bootstrap support for C4Y8S9 as seed ortholog is 100%.

Group of orthologs #335. Best score 710 bits
Score difference with first non-orthologous sequence - A.gossypii:108 C.lusitaniae:549

Q753U6              	100.00%		C4Y133              	100.00%
Bootstrap support for Q753U6 as seed ortholog is 99%.
Bootstrap support for C4Y133 as seed ortholog is 100%.

Group of orthologs #336. Best score 708 bits
Score difference with first non-orthologous sequence - A.gossypii:708 C.lusitaniae:708

Q750R1              	100.00%		C4Y385              	100.00%
Bootstrap support for Q750R1 as seed ortholog is 100%.
Bootstrap support for C4Y385 as seed ortholog is 100%.

Group of orthologs #337. Best score 707 bits
Score difference with first non-orthologous sequence - A.gossypii:707 C.lusitaniae:707

Q75C71              	100.00%		C4Y5L5              	100.00%
Bootstrap support for Q75C71 as seed ortholog is 100%.
Bootstrap support for C4Y5L5 as seed ortholog is 100%.

Group of orthologs #338. Best score 706 bits
Score difference with first non-orthologous sequence - A.gossypii:706 C.lusitaniae:706

Q74ZL8              	100.00%		C4Y0B4              	100.00%
Bootstrap support for Q74ZL8 as seed ortholog is 100%.
Bootstrap support for C4Y0B4 as seed ortholog is 100%.

Group of orthologs #339. Best score 705 bits
Score difference with first non-orthologous sequence - A.gossypii:705 C.lusitaniae:705

Q759E3              	100.00%		C4Y0W9              	100.00%
Bootstrap support for Q759E3 as seed ortholog is 100%.
Bootstrap support for C4Y0W9 as seed ortholog is 100%.

Group of orthologs #340. Best score 704 bits
Score difference with first non-orthologous sequence - A.gossypii:704 C.lusitaniae:704

Q75CI8              	100.00%		C4Y113              	100.00%
Bootstrap support for Q75CI8 as seed ortholog is 100%.
Bootstrap support for C4Y113 as seed ortholog is 100%.

Group of orthologs #341. Best score 703 bits
Score difference with first non-orthologous sequence - A.gossypii:703 C.lusitaniae:624

Q75CF2              	100.00%		C4Y6R5              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 100%.
Bootstrap support for C4Y6R5 as seed ortholog is 100%.

Group of orthologs #342. Best score 701 bits
Score difference with first non-orthologous sequence - A.gossypii:701 C.lusitaniae:701

Q75AW5              	100.00%		C4YAV6              	100.00%
Bootstrap support for Q75AW5 as seed ortholog is 100%.
Bootstrap support for C4YAV6 as seed ortholog is 100%.

Group of orthologs #343. Best score 700 bits
Score difference with first non-orthologous sequence - A.gossypii:700 C.lusitaniae:700

Q753L7              	100.00%		C4Y6H2              	100.00%
Bootstrap support for Q753L7 as seed ortholog is 100%.
Bootstrap support for C4Y6H2 as seed ortholog is 100%.

Group of orthologs #344. Best score 700 bits
Score difference with first non-orthologous sequence - A.gossypii:700 C.lusitaniae:700

Q759R7              	100.00%		C4Y3L2              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for C4Y3L2 as seed ortholog is 100%.

Group of orthologs #345. Best score 700 bits
Score difference with first non-orthologous sequence - A.gossypii:599 C.lusitaniae:588

Q75D00              	100.00%		C4Y507              	100.00%
Bootstrap support for Q75D00 as seed ortholog is 100%.
Bootstrap support for C4Y507 as seed ortholog is 100%.

Group of orthologs #346. Best score 698 bits
Score difference with first non-orthologous sequence - A.gossypii:698 C.lusitaniae:698

Q75EY8              	100.00%		C4YA56              	100.00%
Bootstrap support for Q75EY8 as seed ortholog is 100%.
Bootstrap support for C4YA56 as seed ortholog is 100%.

Group of orthologs #347. Best score 697 bits
Score difference with first non-orthologous sequence - A.gossypii:697 C.lusitaniae:697

Q75AU7              	100.00%		C4Y9I7              	100.00%
Bootstrap support for Q75AU7 as seed ortholog is 100%.
Bootstrap support for C4Y9I7 as seed ortholog is 100%.

Group of orthologs #348. Best score 696 bits
Score difference with first non-orthologous sequence - A.gossypii:696 C.lusitaniae:696

Q74ZS1              	100.00%		C4YBU4              	100.00%
Bootstrap support for Q74ZS1 as seed ortholog is 100%.
Bootstrap support for C4YBU4 as seed ortholog is 100%.

Group of orthologs #349. Best score 696 bits
Score difference with first non-orthologous sequence - A.gossypii:696 C.lusitaniae:696

Q75DL9              	100.00%		C4Y9N2              	100.00%
Bootstrap support for Q75DL9 as seed ortholog is 100%.
Bootstrap support for C4Y9N2 as seed ortholog is 100%.

Group of orthologs #350. Best score 696 bits
Score difference with first non-orthologous sequence - A.gossypii:696 C.lusitaniae:696

Q75DK8              	100.00%		C4YAU7              	100.00%
Bootstrap support for Q75DK8 as seed ortholog is 100%.
Bootstrap support for C4YAU7 as seed ortholog is 100%.

Group of orthologs #351. Best score 695 bits
Score difference with first non-orthologous sequence - A.gossypii:695 C.lusitaniae:367

Q750M9              	100.00%		C4XXU9              	100.00%
Bootstrap support for Q750M9 as seed ortholog is 100%.
Bootstrap support for C4XXU9 as seed ortholog is 100%.

Group of orthologs #352. Best score 695 bits
Score difference with first non-orthologous sequence - A.gossypii:695 C.lusitaniae:695

Q75BT4              	100.00%		C4XYY3              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for C4XYY3 as seed ortholog is 100%.

Group of orthologs #353. Best score 694 bits
Score difference with first non-orthologous sequence - A.gossypii:694 C.lusitaniae:694

Q755G5              	100.00%		C4XYF8              	100.00%
Bootstrap support for Q755G5 as seed ortholog is 100%.
Bootstrap support for C4XYF8 as seed ortholog is 100%.

Group of orthologs #354. Best score 694 bits
Score difference with first non-orthologous sequence - A.gossypii:694 C.lusitaniae:694

Q752A9              	100.00%		C4Y9N4              	100.00%
Bootstrap support for Q752A9 as seed ortholog is 100%.
Bootstrap support for C4Y9N4 as seed ortholog is 100%.

Group of orthologs #355. Best score 693 bits
Score difference with first non-orthologous sequence - A.gossypii:693 C.lusitaniae:693

Q755A5              	100.00%		C4YAB6              	100.00%
Bootstrap support for Q755A5 as seed ortholog is 100%.
Bootstrap support for C4YAB6 as seed ortholog is 100%.

Group of orthologs #356. Best score 693 bits
Score difference with first non-orthologous sequence - A.gossypii:693 C.lusitaniae:693

Q759H2              	100.00%		C4YC50              	100.00%
Bootstrap support for Q759H2 as seed ortholog is 100%.
Bootstrap support for C4YC50 as seed ortholog is 100%.

Group of orthologs #357. Best score 692 bits
Score difference with first non-orthologous sequence - A.gossypii:692 C.lusitaniae:692

Q754T7              	100.00%		C4XVZ8              	100.00%
Bootstrap support for Q754T7 as seed ortholog is 100%.
Bootstrap support for C4XVZ8 as seed ortholog is 100%.

Group of orthologs #358. Best score 691 bits
Score difference with first non-orthologous sequence - A.gossypii:691 C.lusitaniae:691

Q751F6              	100.00%		C4XZN7              	100.00%
Bootstrap support for Q751F6 as seed ortholog is 100%.
Bootstrap support for C4XZN7 as seed ortholog is 100%.

Group of orthologs #359. Best score 691 bits
Score difference with first non-orthologous sequence - A.gossypii:691 C.lusitaniae:691

Q757Q6              	100.00%		C4XVP9              	100.00%
Bootstrap support for Q757Q6 as seed ortholog is 100%.
Bootstrap support for C4XVP9 as seed ortholog is 100%.

Group of orthologs #360. Best score 691 bits
Score difference with first non-orthologous sequence - A.gossypii:691 C.lusitaniae:552

Q75CD0              	100.00%		C4YCG8              	100.00%
Bootstrap support for Q75CD0 as seed ortholog is 100%.
Bootstrap support for C4YCG8 as seed ortholog is 100%.

Group of orthologs #361. Best score 690 bits
Score difference with first non-orthologous sequence - A.gossypii:690 C.lusitaniae:690

Q74ZC1              	100.00%		C4Y6Y3              	100.00%
Bootstrap support for Q74ZC1 as seed ortholog is 100%.
Bootstrap support for C4Y6Y3 as seed ortholog is 100%.

Group of orthologs #362. Best score 688 bits
Score difference with first non-orthologous sequence - A.gossypii:688 C.lusitaniae:158

Q750Q6              	100.00%		C4Y399              	100.00%
Bootstrap support for Q750Q6 as seed ortholog is 100%.
Bootstrap support for C4Y399 as seed ortholog is 99%.

Group of orthologs #363. Best score 688 bits
Score difference with first non-orthologous sequence - A.gossypii:74 C.lusitaniae:404

Q75CG3              	100.00%		C4Y8K9              	100.00%
Bootstrap support for Q75CG3 as seed ortholog is 98%.
Bootstrap support for C4Y8K9 as seed ortholog is 100%.

Group of orthologs #364. Best score 687 bits
Score difference with first non-orthologous sequence - A.gossypii:687 C.lusitaniae:687

Q759T9              	100.00%		C4XZ59              	100.00%
Bootstrap support for Q759T9 as seed ortholog is 100%.
Bootstrap support for C4XZ59 as seed ortholog is 100%.

Group of orthologs #365. Best score 686 bits
Score difference with first non-orthologous sequence - A.gossypii:686 C.lusitaniae:686

Q750L2              	100.00%		C4YAU3              	100.00%
Bootstrap support for Q750L2 as seed ortholog is 100%.
Bootstrap support for C4YAU3 as seed ortholog is 100%.

Group of orthologs #366. Best score 686 bits
Score difference with first non-orthologous sequence - A.gossypii:686 C.lusitaniae:686

Q75EA7              	100.00%		C4Y415              	100.00%
Bootstrap support for Q75EA7 as seed ortholog is 100%.
Bootstrap support for C4Y415 as seed ortholog is 100%.

Group of orthologs #367. Best score 685 bits
Score difference with first non-orthologous sequence - A.gossypii:276 C.lusitaniae:685

O94198              	100.00%		C4XZM9              	100.00%
Bootstrap support for O94198 as seed ortholog is 100%.
Bootstrap support for C4XZM9 as seed ortholog is 100%.

Group of orthologs #368. Best score 685 bits
Score difference with first non-orthologous sequence - A.gossypii:685 C.lusitaniae:685

Q752D6              	100.00%		C4Y214              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for C4Y214 as seed ortholog is 100%.

Group of orthologs #369. Best score 685 bits
Score difference with first non-orthologous sequence - A.gossypii:685 C.lusitaniae:685

Q752H7              	100.00%		C4Y4E1              	100.00%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for C4Y4E1 as seed ortholog is 100%.

Group of orthologs #370. Best score 684 bits
Score difference with first non-orthologous sequence - A.gossypii:684 C.lusitaniae:684

Q751G2              	100.00%		C4YCC7              	100.00%
                    	       		C4Y4T4              	87.46%
Bootstrap support for Q751G2 as seed ortholog is 100%.
Bootstrap support for C4YCC7 as seed ortholog is 100%.

Group of orthologs #371. Best score 684 bits
Score difference with first non-orthologous sequence - A.gossypii:684 C.lusitaniae:684

Q74ZS6              	100.00%		C4Y7A4              	100.00%
Bootstrap support for Q74ZS6 as seed ortholog is 100%.
Bootstrap support for C4Y7A4 as seed ortholog is 100%.

Group of orthologs #372. Best score 683 bits
Score difference with first non-orthologous sequence - A.gossypii:683 C.lusitaniae:683

Q755K2              	100.00%		C4XYF2              	100.00%
Bootstrap support for Q755K2 as seed ortholog is 100%.
Bootstrap support for C4XYF2 as seed ortholog is 100%.

Group of orthologs #373. Best score 683 bits
Score difference with first non-orthologous sequence - A.gossypii:683 C.lusitaniae:683

Q752R1              	100.00%		C4Y0F4              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for C4Y0F4 as seed ortholog is 100%.

Group of orthologs #374. Best score 683 bits
Score difference with first non-orthologous sequence - A.gossypii:683 C.lusitaniae:683

Q756Z5              	100.00%		C4XYE1              	100.00%
Bootstrap support for Q756Z5 as seed ortholog is 100%.
Bootstrap support for C4XYE1 as seed ortholog is 100%.

Group of orthologs #375. Best score 681 bits
Score difference with first non-orthologous sequence - A.gossypii:681 C.lusitaniae:681

Q74ZZ9              	100.00%		C4Y280              	100.00%
Bootstrap support for Q74ZZ9 as seed ortholog is 100%.
Bootstrap support for C4Y280 as seed ortholog is 100%.

Group of orthologs #376. Best score 681 bits
Score difference with first non-orthologous sequence - A.gossypii:681 C.lusitaniae:681

Q757L9              	100.00%		C4Y0D1              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for C4Y0D1 as seed ortholog is 100%.

Group of orthologs #377. Best score 681 bits
Score difference with first non-orthologous sequence - A.gossypii:681 C.lusitaniae:681

Q759W0              	100.00%		C4Y9P2              	100.00%
Bootstrap support for Q759W0 as seed ortholog is 100%.
Bootstrap support for C4Y9P2 as seed ortholog is 100%.

Group of orthologs #378. Best score 680 bits
Score difference with first non-orthologous sequence - A.gossypii:680 C.lusitaniae:680

Q758F0              	100.00%		C4Y365              	100.00%
Bootstrap support for Q758F0 as seed ortholog is 100%.
Bootstrap support for C4Y365 as seed ortholog is 100%.

Group of orthologs #379. Best score 678 bits
Score difference with first non-orthologous sequence - A.gossypii:678 C.lusitaniae:678

Q75C55              	100.00%		C4Y749              	100.00%
Bootstrap support for Q75C55 as seed ortholog is 100%.
Bootstrap support for C4Y749 as seed ortholog is 100%.

Group of orthologs #380. Best score 677 bits
Score difference with first non-orthologous sequence - A.gossypii:677 C.lusitaniae:70

Q75BK3              	100.00%		C4Y2Q4              	100.00%
Bootstrap support for Q75BK3 as seed ortholog is 100%.
Bootstrap support for C4Y2Q4 as seed ortholog is 92%.

Group of orthologs #381. Best score 676 bits
Score difference with first non-orthologous sequence - A.gossypii:676 C.lusitaniae:676

Q75CE2              	100.00%		C4XZ56              	100.00%
Bootstrap support for Q75CE2 as seed ortholog is 100%.
Bootstrap support for C4XZ56 as seed ortholog is 100%.

Group of orthologs #382. Best score 676 bits
Score difference with first non-orthologous sequence - A.gossypii:676 C.lusitaniae:676

Q75DU1              	100.00%		C4Y230              	100.00%
Bootstrap support for Q75DU1 as seed ortholog is 100%.
Bootstrap support for C4Y230 as seed ortholog is 100%.

Group of orthologs #383. Best score 676 bits
Score difference with first non-orthologous sequence - A.gossypii:676 C.lusitaniae:676

Q759Y3              	100.00%		C4Y8X8              	100.00%
Bootstrap support for Q759Y3 as seed ortholog is 100%.
Bootstrap support for C4Y8X8 as seed ortholog is 100%.

Group of orthologs #384. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:675 C.lusitaniae:675

Q74Z13              	100.00%		C4XW26              	100.00%
Bootstrap support for Q74Z13 as seed ortholog is 100%.
Bootstrap support for C4XW26 as seed ortholog is 100%.

Group of orthologs #385. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:550 C.lusitaniae:675

Q753C2              	100.00%		C4XY57              	100.00%
Bootstrap support for Q753C2 as seed ortholog is 100%.
Bootstrap support for C4XY57 as seed ortholog is 100%.

Group of orthologs #386. Best score 675 bits
Score difference with first non-orthologous sequence - A.gossypii:675 C.lusitaniae:675

Q756V6              	100.00%		C4XXQ7              	100.00%
Bootstrap support for Q756V6 as seed ortholog is 100%.
Bootstrap support for C4XXQ7 as seed ortholog is 100%.

Group of orthologs #387. Best score 674 bits
Score difference with first non-orthologous sequence - A.gossypii:674 C.lusitaniae:595

Q759N3              	100.00%		C4Y4Y7              	100.00%
Bootstrap support for Q759N3 as seed ortholog is 100%.
Bootstrap support for C4Y4Y7 as seed ortholog is 100%.

Group of orthologs #388. Best score 673 bits
Score difference with first non-orthologous sequence - A.gossypii:266 C.lusitaniae:501

Q755I1              	100.00%		C4XX14              	100.00%
Bootstrap support for Q755I1 as seed ortholog is 100%.
Bootstrap support for C4XX14 as seed ortholog is 100%.

Group of orthologs #389. Best score 673 bits
Score difference with first non-orthologous sequence - A.gossypii:673 C.lusitaniae:673

Q759C0              	100.00%		C4YCA9              	100.00%
Bootstrap support for Q759C0 as seed ortholog is 100%.
Bootstrap support for C4YCA9 as seed ortholog is 100%.

Group of orthologs #390. Best score 672 bits
Score difference with first non-orthologous sequence - A.gossypii:440 C.lusitaniae:226

Q759J8              	100.00%		C4XZJ9              	100.00%
Bootstrap support for Q759J8 as seed ortholog is 100%.
Bootstrap support for C4XZJ9 as seed ortholog is 99%.

Group of orthologs #391. Best score 672 bits
Score difference with first non-orthologous sequence - A.gossypii:672 C.lusitaniae:205

Q75D43              	100.00%		C4Y6X3              	100.00%
Bootstrap support for Q75D43 as seed ortholog is 100%.
Bootstrap support for C4Y6X3 as seed ortholog is 97%.

Group of orthologs #392. Best score 671 bits
Score difference with first non-orthologous sequence - A.gossypii:671 C.lusitaniae:671

Q751J3              	100.00%		C4Y6B7              	100.00%
Bootstrap support for Q751J3 as seed ortholog is 100%.
Bootstrap support for C4Y6B7 as seed ortholog is 100%.

Group of orthologs #393. Best score 671 bits
Score difference with first non-orthologous sequence - A.gossypii:671 C.lusitaniae:671

Q753Y9              	100.00%		C4YBU9              	100.00%
Bootstrap support for Q753Y9 as seed ortholog is 100%.
Bootstrap support for C4YBU9 as seed ortholog is 100%.

Group of orthologs #394. Best score 670 bits
Score difference with first non-orthologous sequence - A.gossypii:670 C.lusitaniae:670

Q757I5              	100.00%		C4XWU2              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for C4XWU2 as seed ortholog is 100%.

Group of orthologs #395. Best score 670 bits
Score difference with first non-orthologous sequence - A.gossypii:670 C.lusitaniae:670

Q75ED8              	100.00%		C4Y8E7              	100.00%
Bootstrap support for Q75ED8 as seed ortholog is 100%.
Bootstrap support for C4Y8E7 as seed ortholog is 100%.

Group of orthologs #396. Best score 668 bits
Score difference with first non-orthologous sequence - A.gossypii:668 C.lusitaniae:668

Q753A5              	100.00%		C4Y8V0              	100.00%
Bootstrap support for Q753A5 as seed ortholog is 100%.
Bootstrap support for C4Y8V0 as seed ortholog is 100%.

Group of orthologs #397. Best score 668 bits
Score difference with first non-orthologous sequence - A.gossypii:668 C.lusitaniae:668

Q756H2              	100.00%		C4Y6W3              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for C4Y6W3 as seed ortholog is 100%.

Group of orthologs #398. Best score 668 bits
Score difference with first non-orthologous sequence - A.gossypii:668 C.lusitaniae:668

Q75F41              	100.00%		C4Y6C9              	100.00%
Bootstrap support for Q75F41 as seed ortholog is 100%.
Bootstrap support for C4Y6C9 as seed ortholog is 100%.

Group of orthologs #399. Best score 667 bits
Score difference with first non-orthologous sequence - A.gossypii:667 C.lusitaniae:570

Q757I3              	100.00%		C4XX35              	100.00%
Bootstrap support for Q757I3 as seed ortholog is 100%.
Bootstrap support for C4XX35 as seed ortholog is 100%.

Group of orthologs #400. Best score 667 bits
Score difference with first non-orthologous sequence - A.gossypii:667 C.lusitaniae:667

Q751F3              	100.00%		C4Y730              	100.00%
Bootstrap support for Q751F3 as seed ortholog is 100%.
Bootstrap support for C4Y730 as seed ortholog is 100%.

Group of orthologs #401. Best score 666 bits
Score difference with first non-orthologous sequence - A.gossypii:666 C.lusitaniae:666

Q75BJ0              	100.00%		C4XZB8              	100.00%
Bootstrap support for Q75BJ0 as seed ortholog is 100%.
Bootstrap support for C4XZB8 as seed ortholog is 100%.

Group of orthologs #402. Best score 665 bits
Score difference with first non-orthologous sequence - A.gossypii:665 C.lusitaniae:118

Q750V0              	100.00%		C4Y3C7              	100.00%
Bootstrap support for Q750V0 as seed ortholog is 100%.
Bootstrap support for C4Y3C7 as seed ortholog is 98%.

Group of orthologs #403. Best score 665 bits
Score difference with first non-orthologous sequence - A.gossypii:665 C.lusitaniae:665

Q75EI5              	100.00%		C4Y0A1              	100.00%
Bootstrap support for Q75EI5 as seed ortholog is 100%.
Bootstrap support for C4Y0A1 as seed ortholog is 100%.

Group of orthologs #404. Best score 665 bits
Score difference with first non-orthologous sequence - A.gossypii:665 C.lusitaniae:665

Q75E77              	100.00%		C4Y0Y8              	100.00%
Bootstrap support for Q75E77 as seed ortholog is 100%.
Bootstrap support for C4Y0Y8 as seed ortholog is 100%.

Group of orthologs #405. Best score 664 bits
Score difference with first non-orthologous sequence - A.gossypii:664 C.lusitaniae:595

Q75DH3              	100.00%		C4Y7R8              	100.00%
Bootstrap support for Q75DH3 as seed ortholog is 100%.
Bootstrap support for C4Y7R8 as seed ortholog is 100%.

Group of orthologs #406. Best score 663 bits
Score difference with first non-orthologous sequence - A.gossypii:663 C.lusitaniae:663

Q756K0              	100.00%		C4Y382              	100.00%
Bootstrap support for Q756K0 as seed ortholog is 100%.
Bootstrap support for C4Y382 as seed ortholog is 100%.

Group of orthologs #407. Best score 663 bits
Score difference with first non-orthologous sequence - A.gossypii:663 C.lusitaniae:663

Q75DX7              	100.00%		C4Y689              	100.00%
Bootstrap support for Q75DX7 as seed ortholog is 100%.
Bootstrap support for C4Y689 as seed ortholog is 100%.

Group of orthologs #408. Best score 662 bits
Score difference with first non-orthologous sequence - A.gossypii:662 C.lusitaniae:662

Q75A24              	100.00%		C4Y179              	100.00%
Bootstrap support for Q75A24 as seed ortholog is 100%.
Bootstrap support for C4Y179 as seed ortholog is 100%.

Group of orthologs #409. Best score 662 bits
Score difference with first non-orthologous sequence - A.gossypii:662 C.lusitaniae:662

Q75F49              	100.00%		C4XXY2              	100.00%
Bootstrap support for Q75F49 as seed ortholog is 100%.
Bootstrap support for C4XXY2 as seed ortholog is 100%.

Group of orthologs #410. Best score 662 bits
Score difference with first non-orthologous sequence - A.gossypii:592 C.lusitaniae:662

Q75BW2              	100.00%		C4Y3P7              	100.00%
Bootstrap support for Q75BW2 as seed ortholog is 100%.
Bootstrap support for C4Y3P7 as seed ortholog is 100%.

Group of orthologs #411. Best score 662 bits
Score difference with first non-orthologous sequence - A.gossypii:662 C.lusitaniae:563

Q75CL5              	100.00%		C4YBV8              	100.00%
Bootstrap support for Q75CL5 as seed ortholog is 100%.
Bootstrap support for C4YBV8 as seed ortholog is 100%.

Group of orthologs #412. Best score 661 bits
Score difference with first non-orthologous sequence - A.gossypii:268 C.lusitaniae:298

Q755M1              	100.00%		C4XWU6              	100.00%
Q755L9              	45.81%		C4XWU8              	21.22%
Q755L8              	25.12%		
Bootstrap support for Q755M1 as seed ortholog is 100%.
Bootstrap support for C4XWU6 as seed ortholog is 100%.

Group of orthologs #413. Best score 661 bits
Score difference with first non-orthologous sequence - A.gossypii:661 C.lusitaniae:661

Q758T5              	100.00%		C4Y086              	100.00%
Bootstrap support for Q758T5 as seed ortholog is 100%.
Bootstrap support for C4Y086 as seed ortholog is 100%.

Group of orthologs #414. Best score 661 bits
Score difference with first non-orthologous sequence - A.gossypii:661 C.lusitaniae:661

Q759T6              	100.00%		C4Y544              	100.00%
Bootstrap support for Q759T6 as seed ortholog is 100%.
Bootstrap support for C4Y544 as seed ortholog is 100%.

Group of orthologs #415. Best score 656 bits
Score difference with first non-orthologous sequence - A.gossypii:656 C.lusitaniae:656

Q75AE8              	100.00%		C4XWE8              	100.00%
Bootstrap support for Q75AE8 as seed ortholog is 100%.
Bootstrap support for C4XWE8 as seed ortholog is 100%.

Group of orthologs #416. Best score 655 bits
Score difference with first non-orthologous sequence - A.gossypii:655 C.lusitaniae:655

Q750W1              	100.00%		C4XWE3              	100.00%
Bootstrap support for Q750W1 as seed ortholog is 100%.
Bootstrap support for C4XWE3 as seed ortholog is 100%.

Group of orthologs #417. Best score 655 bits
Score difference with first non-orthologous sequence - A.gossypii:655 C.lusitaniae:655

Q751U0              	100.00%		C4XZ94              	100.00%
Bootstrap support for Q751U0 as seed ortholog is 100%.
Bootstrap support for C4XZ94 as seed ortholog is 100%.

Group of orthologs #418. Best score 655 bits
Score difference with first non-orthologous sequence - A.gossypii:655 C.lusitaniae:655

Q754Z3              	100.00%		C4Y4Z2              	100.00%
Bootstrap support for Q754Z3 as seed ortholog is 100%.
Bootstrap support for C4Y4Z2 as seed ortholog is 100%.

Group of orthologs #419. Best score 655 bits
Score difference with first non-orthologous sequence - A.gossypii:655 C.lusitaniae:655

Q75CB5              	100.00%		C4XZS9              	100.00%
Bootstrap support for Q75CB5 as seed ortholog is 100%.
Bootstrap support for C4XZS9 as seed ortholog is 100%.

Group of orthologs #420. Best score 654 bits
Score difference with first non-orthologous sequence - A.gossypii:654 C.lusitaniae:654

Q753S4              	100.00%		C4Y0X8              	100.00%
Bootstrap support for Q753S4 as seed ortholog is 100%.
Bootstrap support for C4Y0X8 as seed ortholog is 100%.

Group of orthologs #421. Best score 653 bits
Score difference with first non-orthologous sequence - A.gossypii:653 C.lusitaniae:116

Q750K1              	100.00%		C4XYR8              	100.00%
Bootstrap support for Q750K1 as seed ortholog is 100%.
Bootstrap support for C4XYR8 as seed ortholog is 99%.

Group of orthologs #422. Best score 651 bits
Score difference with first non-orthologous sequence - A.gossypii:651 C.lusitaniae:651

Q758N6              	100.00%		C4XYL3              	100.00%
Bootstrap support for Q758N6 as seed ortholog is 100%.
Bootstrap support for C4XYL3 as seed ortholog is 100%.

Group of orthologs #423. Best score 651 bits
Score difference with first non-orthologous sequence - A.gossypii:651 C.lusitaniae:651

Q75EK1              	100.00%		C4Y890              	100.00%
Bootstrap support for Q75EK1 as seed ortholog is 100%.
Bootstrap support for C4Y890 as seed ortholog is 100%.

Group of orthologs #424. Best score 650 bits
Score difference with first non-orthologous sequence - A.gossypii:650 C.lusitaniae:650

Q75C39              	100.00%		C4XXL7              	100.00%
Bootstrap support for Q75C39 as seed ortholog is 100%.
Bootstrap support for C4XXL7 as seed ortholog is 100%.

Group of orthologs #425. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:649 C.lusitaniae:649

Q753K8              	100.00%		C4XWW5              	100.00%
Bootstrap support for Q753K8 as seed ortholog is 100%.
Bootstrap support for C4XWW5 as seed ortholog is 100%.

Group of orthologs #426. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:649 C.lusitaniae:649

Q754A0              	100.00%		C4XZG1              	100.00%
Bootstrap support for Q754A0 as seed ortholog is 100%.
Bootstrap support for C4XZG1 as seed ortholog is 100%.

Group of orthologs #427. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:146 C.lusitaniae:107

Q751M5              	100.00%		C4Y363              	100.00%
Bootstrap support for Q751M5 as seed ortholog is 99%.
Bootstrap support for C4Y363 as seed ortholog is 99%.

Group of orthologs #428. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:437 C.lusitaniae:478

Q757V3              	100.00%		C4Y404              	100.00%
Bootstrap support for Q757V3 as seed ortholog is 100%.
Bootstrap support for C4Y404 as seed ortholog is 100%.

Group of orthologs #429. Best score 649 bits
Score difference with first non-orthologous sequence - A.gossypii:649 C.lusitaniae:250

Q75F55              	100.00%		C4XZ48              	100.00%
Bootstrap support for Q75F55 as seed ortholog is 100%.
Bootstrap support for C4XZ48 as seed ortholog is 100%.

Group of orthologs #430. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:179 C.lusitaniae:247

Q75C44              	100.00%		C4Y3E1              	100.00%
Bootstrap support for Q75C44 as seed ortholog is 99%.
Bootstrap support for C4Y3E1 as seed ortholog is 99%.

Group of orthologs #431. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:648 C.lusitaniae:288

Q753J0              	100.00%		C4YAQ4              	100.00%
Bootstrap support for Q753J0 as seed ortholog is 100%.
Bootstrap support for C4YAQ4 as seed ortholog is 100%.

Group of orthologs #432. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:648 C.lusitaniae:648

Q75B30              	100.00%		C4Y6Z0              	100.00%
Bootstrap support for Q75B30 as seed ortholog is 100%.
Bootstrap support for C4Y6Z0 as seed ortholog is 100%.

Group of orthologs #433. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:648 C.lusitaniae:537

Q756H9              	100.00%		C4YBD3              	100.00%
Bootstrap support for Q756H9 as seed ortholog is 100%.
Bootstrap support for C4YBD3 as seed ortholog is 100%.

Group of orthologs #434. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:648 C.lusitaniae:648

Q75A13              	100.00%		C4Y949              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for C4Y949 as seed ortholog is 100%.

Group of orthologs #435. Best score 648 bits
Score difference with first non-orthologous sequence - A.gossypii:648 C.lusitaniae:648

Q756T1              	100.00%		C4YCD1              	100.00%
Bootstrap support for Q756T1 as seed ortholog is 100%.
Bootstrap support for C4YCD1 as seed ortholog is 100%.

Group of orthologs #436. Best score 647 bits
Score difference with first non-orthologous sequence - A.gossypii:647 C.lusitaniae:647

Q750J4              	100.00%		C4Y4F8              	100.00%
Bootstrap support for Q750J4 as seed ortholog is 100%.
Bootstrap support for C4Y4F8 as seed ortholog is 100%.

Group of orthologs #437. Best score 646 bits
Score difference with first non-orthologous sequence - A.gossypii:646 C.lusitaniae:646

Q750N7              	100.00%		C4XZF9              	100.00%
Bootstrap support for Q750N7 as seed ortholog is 100%.
Bootstrap support for C4XZF9 as seed ortholog is 100%.

Group of orthologs #438. Best score 646 bits
Score difference with first non-orthologous sequence - A.gossypii:646 C.lusitaniae:646

Q75BT9              	100.00%		C4XWY2              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for C4XWY2 as seed ortholog is 100%.

Group of orthologs #439. Best score 646 bits
Score difference with first non-orthologous sequence - A.gossypii:646 C.lusitaniae:646

Q75E73              	100.00%		C4Y0Y7              	100.00%
Bootstrap support for Q75E73 as seed ortholog is 100%.
Bootstrap support for C4Y0Y7 as seed ortholog is 100%.

Group of orthologs #440. Best score 645 bits
Score difference with first non-orthologous sequence - A.gossypii:645 C.lusitaniae:645

Q757E8              	100.00%		C4Y2S3              	100.00%
Bootstrap support for Q757E8 as seed ortholog is 100%.
Bootstrap support for C4Y2S3 as seed ortholog is 100%.

Group of orthologs #441. Best score 644 bits
Score difference with first non-orthologous sequence - A.gossypii:644 C.lusitaniae:644

Q75CW4              	100.00%		C4XZU7              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for C4XZU7 as seed ortholog is 100%.

Group of orthologs #442. Best score 643 bits
Score difference with first non-orthologous sequence - A.gossypii:643 C.lusitaniae:643

Q74ZT4              	100.00%		C4YAD8              	100.00%
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for C4YAD8 as seed ortholog is 100%.

Group of orthologs #443. Best score 641 bits
Score difference with first non-orthologous sequence - A.gossypii:641 C.lusitaniae:641

Q751M7              	100.00%		C4Y4U8              	100.00%
Bootstrap support for Q751M7 as seed ortholog is 100%.
Bootstrap support for C4Y4U8 as seed ortholog is 100%.

Group of orthologs #444. Best score 641 bits
Score difference with first non-orthologous sequence - A.gossypii:641 C.lusitaniae:641

Q757W8              	100.00%		C4Y2S9              	100.00%
Bootstrap support for Q757W8 as seed ortholog is 100%.
Bootstrap support for C4Y2S9 as seed ortholog is 100%.

Group of orthologs #445. Best score 640 bits
Score difference with first non-orthologous sequence - A.gossypii:640 C.lusitaniae:640

Q755N4              	100.00%		C4Y200              	100.00%
Bootstrap support for Q755N4 as seed ortholog is 100%.
Bootstrap support for C4Y200 as seed ortholog is 100%.

Group of orthologs #446. Best score 639 bits
Score difference with first non-orthologous sequence - A.gossypii:639 C.lusitaniae:639

Q755E3              	100.00%		C4Y287              	100.00%
Bootstrap support for Q755E3 as seed ortholog is 100%.
Bootstrap support for C4Y287 as seed ortholog is 100%.

Group of orthologs #447. Best score 638 bits
Score difference with first non-orthologous sequence - A.gossypii:76 C.lusitaniae:185

Q753U5              	100.00%		C4XXU0              	100.00%
                    	       		C4XWM9              	68.98%
Bootstrap support for Q753U5 as seed ortholog is 95%.
Bootstrap support for C4XXU0 as seed ortholog is 99%.

Group of orthologs #448. Best score 638 bits
Score difference with first non-orthologous sequence - A.gossypii:638 C.lusitaniae:638

Q754I9              	100.00%		C4Y300              	100.00%
Bootstrap support for Q754I9 as seed ortholog is 100%.
Bootstrap support for C4Y300 as seed ortholog is 100%.

Group of orthologs #449. Best score 638 bits
Score difference with first non-orthologous sequence - A.gossypii:638 C.lusitaniae:638

Q75B86              	100.00%		C4YC13              	100.00%
Bootstrap support for Q75B86 as seed ortholog is 100%.
Bootstrap support for C4YC13 as seed ortholog is 100%.

Group of orthologs #450. Best score 637 bits
Score difference with first non-orthologous sequence - A.gossypii:637 C.lusitaniae:637

Q750R2              	100.00%		C4Y386              	100.00%
Bootstrap support for Q750R2 as seed ortholog is 100%.
Bootstrap support for C4Y386 as seed ortholog is 100%.

Group of orthologs #451. Best score 637 bits
Score difference with first non-orthologous sequence - A.gossypii:637 C.lusitaniae:637

Q750H3              	100.00%		C4Y3X2              	100.00%
Bootstrap support for Q750H3 as seed ortholog is 100%.
Bootstrap support for C4Y3X2 as seed ortholog is 100%.

Group of orthologs #452. Best score 637 bits
Score difference with first non-orthologous sequence - A.gossypii:582 C.lusitaniae:637

Q757F2              	100.00%		C4Y1J6              	100.00%
Bootstrap support for Q757F2 as seed ortholog is 100%.
Bootstrap support for C4Y1J6 as seed ortholog is 100%.

Group of orthologs #453. Best score 637 bits
Score difference with first non-orthologous sequence - A.gossypii:637 C.lusitaniae:637

O60028              	100.00%		C4YB61              	100.00%
Bootstrap support for O60028 as seed ortholog is 100%.
Bootstrap support for C4YB61 as seed ortholog is 100%.

Group of orthologs #454. Best score 636 bits
Score difference with first non-orthologous sequence - A.gossypii:636 C.lusitaniae:636

Q752F4              	100.00%		C4Y6N2              	100.00%
Bootstrap support for Q752F4 as seed ortholog is 100%.
Bootstrap support for C4Y6N2 as seed ortholog is 100%.

Group of orthologs #455. Best score 636 bits
Score difference with first non-orthologous sequence - A.gossypii:636 C.lusitaniae:636

Q75B54              	100.00%		C4Y482              	100.00%
Bootstrap support for Q75B54 as seed ortholog is 100%.
Bootstrap support for C4Y482 as seed ortholog is 100%.

Group of orthologs #456. Best score 635 bits
Score difference with first non-orthologous sequence - A.gossypii:635 C.lusitaniae:635

Q758I0              	100.00%		C4XXT8              	100.00%
Bootstrap support for Q758I0 as seed ortholog is 100%.
Bootstrap support for C4XXT8 as seed ortholog is 100%.

Group of orthologs #457. Best score 634 bits
Score difference with first non-orthologous sequence - A.gossypii:634 C.lusitaniae:386

Q750I3              	100.00%		C4XXW7              	100.00%
Bootstrap support for Q750I3 as seed ortholog is 100%.
Bootstrap support for C4XXW7 as seed ortholog is 100%.

Group of orthologs #458. Best score 634 bits
Score difference with first non-orthologous sequence - A.gossypii:270 C.lusitaniae:634

Q75ES5              	100.00%		C4Y731              	100.00%
Bootstrap support for Q75ES5 as seed ortholog is 100%.
Bootstrap support for C4Y731 as seed ortholog is 100%.

Group of orthologs #459. Best score 633 bits
Score difference with first non-orthologous sequence - A.gossypii:394 C.lusitaniae:633

Q758U9              	100.00%		C4Y9U8              	100.00%
Bootstrap support for Q758U9 as seed ortholog is 100%.
Bootstrap support for C4Y9U8 as seed ortholog is 100%.

Group of orthologs #460. Best score 631 bits
Score difference with first non-orthologous sequence - A.gossypii:631 C.lusitaniae:631

Q756M4              	100.00%		C4Y834              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for C4Y834 as seed ortholog is 100%.

Group of orthologs #461. Best score 629 bits
Score difference with first non-orthologous sequence - A.gossypii:629 C.lusitaniae:629

Q757Q0              	100.00%		C4Y6B1              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for C4Y6B1 as seed ortholog is 100%.

Group of orthologs #462. Best score 629 bits
Score difference with first non-orthologous sequence - A.gossypii:629 C.lusitaniae:629

Q75BJ2              	100.00%		C4Y5R2              	100.00%
Bootstrap support for Q75BJ2 as seed ortholog is 100%.
Bootstrap support for C4Y5R2 as seed ortholog is 100%.

Group of orthologs #463. Best score 627 bits
Score difference with first non-orthologous sequence - A.gossypii:627 C.lusitaniae:627

Q75D13              	100.00%		C4XWR7              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 100%.
Bootstrap support for C4XWR7 as seed ortholog is 100%.

Group of orthologs #464. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 C.lusitaniae:626

Q756X6              	100.00%		C4XW15              	100.00%
Bootstrap support for Q756X6 as seed ortholog is 100%.
Bootstrap support for C4XW15 as seed ortholog is 100%.

Group of orthologs #465. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:230 C.lusitaniae:136

Q752T4              	100.00%		C4XZG7              	100.00%
Bootstrap support for Q752T4 as seed ortholog is 100%.
Bootstrap support for C4XZG7 as seed ortholog is 99%.

Group of orthologs #466. Best score 626 bits
Score difference with first non-orthologous sequence - A.gossypii:626 C.lusitaniae:626

Q75DK7              	100.00%		C4Y0E7              	100.00%
Bootstrap support for Q75DK7 as seed ortholog is 100%.
Bootstrap support for C4Y0E7 as seed ortholog is 100%.

Group of orthologs #467. Best score 625 bits
Score difference with first non-orthologous sequence - A.gossypii:570 C.lusitaniae:625

Q75ET8              	100.00%		C4Y0F0              	100.00%
Bootstrap support for Q75ET8 as seed ortholog is 100%.
Bootstrap support for C4Y0F0 as seed ortholog is 100%.

Group of orthologs #468. Best score 624 bits
Score difference with first non-orthologous sequence - A.gossypii:624 C.lusitaniae:524

Q756Z1              	100.00%		C4XWE4              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 100%.
Bootstrap support for C4XWE4 as seed ortholog is 100%.

Group of orthologs #469. Best score 624 bits
Score difference with first non-orthologous sequence - A.gossypii:624 C.lusitaniae:624

Q75CN5              	100.00%		C4XWM3              	100.00%
Bootstrap support for Q75CN5 as seed ortholog is 100%.
Bootstrap support for C4XWM3 as seed ortholog is 100%.

Group of orthologs #470. Best score 624 bits
Score difference with first non-orthologous sequence - A.gossypii:624 C.lusitaniae:624

Q75F59              	100.00%		C4Y0R6              	100.00%
Bootstrap support for Q75F59 as seed ortholog is 100%.
Bootstrap support for C4Y0R6 as seed ortholog is 100%.

Group of orthologs #471. Best score 623 bits
Score difference with first non-orthologous sequence - A.gossypii:623 C.lusitaniae:623

Q75CQ6              	100.00%		C4XZQ8              	100.00%
Bootstrap support for Q75CQ6 as seed ortholog is 100%.
Bootstrap support for C4XZQ8 as seed ortholog is 100%.

Group of orthologs #472. Best score 623 bits
Score difference with first non-orthologous sequence - A.gossypii:623 C.lusitaniae:623

Q756I5              	100.00%		C4Y6A1              	100.00%
Bootstrap support for Q756I5 as seed ortholog is 100%.
Bootstrap support for C4Y6A1 as seed ortholog is 100%.

Group of orthologs #473. Best score 623 bits
Score difference with first non-orthologous sequence - A.gossypii:623 C.lusitaniae:623

Q756X1              	100.00%		C4YBD5              	100.00%
Bootstrap support for Q756X1 as seed ortholog is 100%.
Bootstrap support for C4YBD5 as seed ortholog is 100%.

Group of orthologs #474. Best score 622 bits
Score difference with first non-orthologous sequence - A.gossypii:622 C.lusitaniae:622

Q750G3              	100.00%		C4Y2U6              	100.00%
Bootstrap support for Q750G3 as seed ortholog is 100%.
Bootstrap support for C4Y2U6 as seed ortholog is 100%.

Group of orthologs #475. Best score 621 bits
Score difference with first non-orthologous sequence - A.gossypii:621 C.lusitaniae:621

Q755L3              	100.00%		C4Y0P0              	100.00%
Bootstrap support for Q755L3 as seed ortholog is 100%.
Bootstrap support for C4Y0P0 as seed ortholog is 100%.

Group of orthologs #476. Best score 620 bits
Score difference with first non-orthologous sequence - A.gossypii:620 C.lusitaniae:620

Q759A5              	100.00%		C4YAW2              	100.00%
Bootstrap support for Q759A5 as seed ortholog is 100%.
Bootstrap support for C4YAW2 as seed ortholog is 100%.

Group of orthologs #477. Best score 619 bits
Score difference with first non-orthologous sequence - A.gossypii:619 C.lusitaniae:619

Q752F6              	100.00%		C4Y5X8              	100.00%
Bootstrap support for Q752F6 as seed ortholog is 100%.
Bootstrap support for C4Y5X8 as seed ortholog is 100%.

Group of orthologs #478. Best score 618 bits
Score difference with first non-orthologous sequence - A.gossypii:618 C.lusitaniae:618

Q75BS1              	100.00%		C4Y625              	100.00%
Bootstrap support for Q75BS1 as seed ortholog is 100%.
Bootstrap support for C4Y625 as seed ortholog is 100%.

Group of orthologs #479. Best score 618 bits
Score difference with first non-orthologous sequence - A.gossypii:618 C.lusitaniae:618

Q75AN6              	100.00%		C4Y8G8              	100.00%
Bootstrap support for Q75AN6 as seed ortholog is 100%.
Bootstrap support for C4Y8G8 as seed ortholog is 100%.

Group of orthologs #480. Best score 618 bits
Score difference with first non-orthologous sequence - A.gossypii:618 C.lusitaniae:618

Q759G4              	100.00%		C4YBP3              	100.00%
Bootstrap support for Q759G4 as seed ortholog is 100%.
Bootstrap support for C4YBP3 as seed ortholog is 100%.

Group of orthologs #481. Best score 617 bits
Score difference with first non-orthologous sequence - A.gossypii:280 C.lusitaniae:617

Q75A21              	100.00%		C4Y1A8              	100.00%
Bootstrap support for Q75A21 as seed ortholog is 100%.
Bootstrap support for C4Y1A8 as seed ortholog is 100%.

Group of orthologs #482. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:616 C.lusitaniae:616

Q752J0              	100.00%		C4Y044              	100.00%
Bootstrap support for Q752J0 as seed ortholog is 100%.
Bootstrap support for C4Y044 as seed ortholog is 100%.

Group of orthologs #483. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:616 C.lusitaniae:616

Q752Q7              	100.00%		C4Y0F6              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 100%.
Bootstrap support for C4Y0F6 as seed ortholog is 100%.

Group of orthologs #484. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:616 C.lusitaniae:616

Q75BC0              	100.00%		C4Y1V1              	100.00%
Bootstrap support for Q75BC0 as seed ortholog is 100%.
Bootstrap support for C4Y1V1 as seed ortholog is 100%.

Group of orthologs #485. Best score 616 bits
Score difference with first non-orthologous sequence - A.gossypii:574 C.lusitaniae:616

Q75F99              	100.00%		C4Y329              	100.00%
Bootstrap support for Q75F99 as seed ortholog is 100%.
Bootstrap support for C4Y329 as seed ortholog is 100%.

Group of orthologs #486. Best score 614 bits
Score difference with first non-orthologous sequence - A.gossypii:614 C.lusitaniae:614

Q75BS9              	100.00%		C4Y6V7              	100.00%
Bootstrap support for Q75BS9 as seed ortholog is 100%.
Bootstrap support for C4Y6V7 as seed ortholog is 100%.

Group of orthologs #487. Best score 613 bits
Score difference with first non-orthologous sequence - A.gossypii:312 C.lusitaniae:329

Q750A9              	100.00%		C4Y101              	100.00%
Bootstrap support for Q750A9 as seed ortholog is 100%.
Bootstrap support for C4Y101 as seed ortholog is 100%.

Group of orthologs #488. Best score 613 bits
Score difference with first non-orthologous sequence - A.gossypii:613 C.lusitaniae:613

Q75AG7              	100.00%		C4Y1B7              	100.00%
Bootstrap support for Q75AG7 as seed ortholog is 100%.
Bootstrap support for C4Y1B7 as seed ortholog is 100%.

Group of orthologs #489. Best score 613 bits
Score difference with first non-orthologous sequence - A.gossypii:613 C.lusitaniae:613

Q751Y3              	100.00%		C4Y9L6              	100.00%
Bootstrap support for Q751Y3 as seed ortholog is 100%.
Bootstrap support for C4Y9L6 as seed ortholog is 100%.

Group of orthologs #490. Best score 612 bits
Score difference with first non-orthologous sequence - A.gossypii:612 C.lusitaniae:612

Q751X9              	100.00%		C4Y1R5              	100.00%
Bootstrap support for Q751X9 as seed ortholog is 100%.
Bootstrap support for C4Y1R5 as seed ortholog is 100%.

Group of orthologs #491. Best score 612 bits
Score difference with first non-orthologous sequence - A.gossypii:612 C.lusitaniae:612

Q75F64              	100.00%		C4XYC5              	100.00%
Bootstrap support for Q75F64 as seed ortholog is 100%.
Bootstrap support for C4XYC5 as seed ortholog is 100%.

Group of orthologs #492. Best score 611 bits
Score difference with first non-orthologous sequence - A.gossypii:611 C.lusitaniae:611

Q751B3              	100.00%		C4Y396              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for C4Y396 as seed ortholog is 100%.

Group of orthologs #493. Best score 611 bits
Score difference with first non-orthologous sequence - A.gossypii:611 C.lusitaniae:611

Q751E0              	100.00%		C4Y5M1              	100.00%
Bootstrap support for Q751E0 as seed ortholog is 100%.
Bootstrap support for C4Y5M1 as seed ortholog is 100%.

Group of orthologs #494. Best score 611 bits
Score difference with first non-orthologous sequence - A.gossypii:611 C.lusitaniae:611

Q75BQ1              	100.00%		C4Y8Q1              	100.00%
Bootstrap support for Q75BQ1 as seed ortholog is 100%.
Bootstrap support for C4Y8Q1 as seed ortholog is 100%.

Group of orthologs #495. Best score 610 bits
Score difference with first non-orthologous sequence - A.gossypii:610 C.lusitaniae:487

Q754F1              	100.00%		C4XZ86              	100.00%
Bootstrap support for Q754F1 as seed ortholog is 100%.
Bootstrap support for C4XZ86 as seed ortholog is 100%.

Group of orthologs #496. Best score 610 bits
Score difference with first non-orthologous sequence - A.gossypii:610 C.lusitaniae:610

Q75DP5              	100.00%		C4Y6V9              	100.00%
Bootstrap support for Q75DP5 as seed ortholog is 100%.
Bootstrap support for C4Y6V9 as seed ortholog is 100%.

Group of orthologs #497. Best score 609 bits
Score difference with first non-orthologous sequence - A.gossypii:609 C.lusitaniae:609

Q75DA8              	100.00%		C4Y7M8              	100.00%
Bootstrap support for Q75DA8 as seed ortholog is 100%.
Bootstrap support for C4Y7M8 as seed ortholog is 100%.

Group of orthologs #498. Best score 608 bits
Score difference with first non-orthologous sequence - A.gossypii:608 C.lusitaniae:608

Q75C70              	100.00%		C4Y3N8              	100.00%
Bootstrap support for Q75C70 as seed ortholog is 100%.
Bootstrap support for C4Y3N8 as seed ortholog is 100%.

Group of orthologs #499. Best score 608 bits
Score difference with first non-orthologous sequence - A.gossypii:608 C.lusitaniae:608

Q75BP6              	100.00%		C4Y8D9              	100.00%
Bootstrap support for Q75BP6 as seed ortholog is 100%.
Bootstrap support for C4Y8D9 as seed ortholog is 100%.

Group of orthologs #500. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:492 C.lusitaniae:468

Q751I3              	100.00%		C4XY67              	100.00%
Bootstrap support for Q751I3 as seed ortholog is 100%.
Bootstrap support for C4XY67 as seed ortholog is 100%.

Group of orthologs #501. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:606 C.lusitaniae:606

Q74ZU5              	100.00%		C4Y374              	100.00%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for C4Y374 as seed ortholog is 100%.

Group of orthologs #502. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:606 C.lusitaniae:606

Q00063              	100.00%		C4Y559              	100.00%
Bootstrap support for Q00063 as seed ortholog is 100%.
Bootstrap support for C4Y559 as seed ortholog is 100%.

Group of orthologs #503. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:606 C.lusitaniae:606

Q75AL3              	100.00%		C4Y8G7              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for C4Y8G7 as seed ortholog is 100%.

Group of orthologs #504. Best score 606 bits
Score difference with first non-orthologous sequence - A.gossypii:606 C.lusitaniae:606

Q75BN9              	100.00%		C4Y8M5              	100.00%
Bootstrap support for Q75BN9 as seed ortholog is 100%.
Bootstrap support for C4Y8M5 as seed ortholog is 100%.

Group of orthologs #505. Best score 605 bits
Score difference with first non-orthologous sequence - A.gossypii:605 C.lusitaniae:13

Q755A6              	100.00%		C4XWJ9              	100.00%
Bootstrap support for Q755A6 as seed ortholog is 100%.
Bootstrap support for C4XWJ9 as seed ortholog is 61%.
Alternative seed ortholog is C4Y0L6 (13 bits away from this cluster)

Group of orthologs #506. Best score 605 bits
Score difference with first non-orthologous sequence - A.gossypii:605 C.lusitaniae:605

Q75B14              	100.00%		C4YAA2              	100.00%
Bootstrap support for Q75B14 as seed ortholog is 100%.
Bootstrap support for C4YAA2 as seed ortholog is 100%.

Group of orthologs #507. Best score 604 bits
Score difference with first non-orthologous sequence - A.gossypii:227 C.lusitaniae:289

Q754I5              	100.00%		C4Y7W9              	100.00%
Bootstrap support for Q754I5 as seed ortholog is 99%.
Bootstrap support for C4Y7W9 as seed ortholog is 99%.

Group of orthologs #508. Best score 604 bits
Score difference with first non-orthologous sequence - A.gossypii:375 C.lusitaniae:380

Q75DM0              	100.00%		C4YCA2              	100.00%
Bootstrap support for Q75DM0 as seed ortholog is 100%.
Bootstrap support for C4YCA2 as seed ortholog is 100%.

Group of orthologs #509. Best score 603 bits
Score difference with first non-orthologous sequence - A.gossypii:521 C.lusitaniae:282

Q75DV8              	100.00%		C4Y5S7              	100.00%
Bootstrap support for Q75DV8 as seed ortholog is 100%.
Bootstrap support for C4Y5S7 as seed ortholog is 99%.

Group of orthologs #510. Best score 602 bits
Score difference with first non-orthologous sequence - A.gossypii:602 C.lusitaniae:602

Q75DF8              	100.00%		C4Y1P4              	100.00%
Bootstrap support for Q75DF8 as seed ortholog is 100%.
Bootstrap support for C4Y1P4 as seed ortholog is 100%.

Group of orthologs #511. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 C.lusitaniae:601

Q757I6              	100.00%		C4XWU3              	100.00%
Bootstrap support for Q757I6 as seed ortholog is 100%.
Bootstrap support for C4XWU3 as seed ortholog is 100%.

Group of orthologs #512. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:601 C.lusitaniae:601

Q758F4              	100.00%		C4Y2J1              	100.00%
Bootstrap support for Q758F4 as seed ortholog is 100%.
Bootstrap support for C4Y2J1 as seed ortholog is 100%.

Group of orthologs #513. Best score 601 bits
Score difference with first non-orthologous sequence - A.gossypii:364 C.lusitaniae:464

Q751B8              	100.00%		C4Y9H6              	100.00%
Bootstrap support for Q751B8 as seed ortholog is 100%.
Bootstrap support for C4Y9H6 as seed ortholog is 100%.

Group of orthologs #514. Best score 600 bits
Score difference with first non-orthologous sequence - A.gossypii:281 C.lusitaniae:263

Q752A8              	100.00%		C4Y6Z6              	100.00%
Q752A7              	15.60%		
Bootstrap support for Q752A8 as seed ortholog is 100%.
Bootstrap support for C4Y6Z6 as seed ortholog is 100%.

Group of orthologs #515. Best score 600 bits
Score difference with first non-orthologous sequence - A.gossypii:600 C.lusitaniae:600

Q755A4              	100.00%		C4Y430              	100.00%
Bootstrap support for Q755A4 as seed ortholog is 100%.
Bootstrap support for C4Y430 as seed ortholog is 100%.

Group of orthologs #516. Best score 600 bits
Score difference with first non-orthologous sequence - A.gossypii:600 C.lusitaniae:600

Q758A6              	100.00%		C4Y6D7              	100.00%
Bootstrap support for Q758A6 as seed ortholog is 100%.
Bootstrap support for C4Y6D7 as seed ortholog is 100%.

Group of orthologs #517. Best score 599 bits
Score difference with first non-orthologous sequence - A.gossypii:599 C.lusitaniae:599

Q756M5              	100.00%		C4XVZ5              	100.00%
Bootstrap support for Q756M5 as seed ortholog is 100%.
Bootstrap support for C4XVZ5 as seed ortholog is 100%.

Group of orthologs #518. Best score 599 bits
Score difference with first non-orthologous sequence - A.gossypii:434 C.lusitaniae:433

Q75A85              	100.00%		C4Y1H1              	100.00%
Bootstrap support for Q75A85 as seed ortholog is 100%.
Bootstrap support for C4Y1H1 as seed ortholog is 100%.

Group of orthologs #519. Best score 598 bits
Score difference with first non-orthologous sequence - A.gossypii:598 C.lusitaniae:598

Q75EC1              	100.00%		C4XW53              	100.00%
Bootstrap support for Q75EC1 as seed ortholog is 100%.
Bootstrap support for C4XW53 as seed ortholog is 100%.

Group of orthologs #520. Best score 597 bits
Score difference with first non-orthologous sequence - A.gossypii:597 C.lusitaniae:597

Q754J2              	100.00%		C4Y7V6              	100.00%
Bootstrap support for Q754J2 as seed ortholog is 100%.
Bootstrap support for C4Y7V6 as seed ortholog is 100%.

Group of orthologs #521. Best score 597 bits
Score difference with first non-orthologous sequence - A.gossypii:597 C.lusitaniae:597

Q75E56              	100.00%		C4YAW7              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for C4YAW7 as seed ortholog is 100%.

Group of orthologs #522. Best score 595 bits
Score difference with first non-orthologous sequence - A.gossypii:595 C.lusitaniae:595

Q750X6              	100.00%		C4XZI9              	100.00%
Bootstrap support for Q750X6 as seed ortholog is 100%.
Bootstrap support for C4XZI9 as seed ortholog is 100%.

Group of orthologs #523. Best score 595 bits
Score difference with first non-orthologous sequence - A.gossypii:595 C.lusitaniae:595

Q75BY4              	100.00%		C4Y322              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for C4Y322 as seed ortholog is 100%.

Group of orthologs #524. Best score 595 bits
Score difference with first non-orthologous sequence - A.gossypii:521 C.lusitaniae:595

Q75CU3              	100.00%		C4Y6B0              	100.00%
Bootstrap support for Q75CU3 as seed ortholog is 100%.
Bootstrap support for C4Y6B0 as seed ortholog is 100%.

Group of orthologs #525. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:594 C.lusitaniae:594

Q754D7              	100.00%		C4Y0X0              	100.00%
Bootstrap support for Q754D7 as seed ortholog is 100%.
Bootstrap support for C4Y0X0 as seed ortholog is 100%.

Group of orthologs #526. Best score 594 bits
Score difference with first non-orthologous sequence - A.gossypii:594 C.lusitaniae:594

Q75CJ8              	100.00%		C4Y2G8              	100.00%
Bootstrap support for Q75CJ8 as seed ortholog is 100%.
Bootstrap support for C4Y2G8 as seed ortholog is 100%.

Group of orthologs #527. Best score 593 bits
Score difference with first non-orthologous sequence - A.gossypii:593 C.lusitaniae:518

Q753F7              	100.00%		C4Y3G6              	100.00%
Bootstrap support for Q753F7 as seed ortholog is 100%.
Bootstrap support for C4Y3G6 as seed ortholog is 100%.

Group of orthologs #528. Best score 593 bits
Score difference with first non-orthologous sequence - A.gossypii:83 C.lusitaniae:55

Q755B5              	100.00%		C4YCH7              	100.00%
Bootstrap support for Q755B5 as seed ortholog is 99%.
Bootstrap support for C4YCH7 as seed ortholog is 98%.

Group of orthologs #529. Best score 590 bits
Score difference with first non-orthologous sequence - A.gossypii:590 C.lusitaniae:131

Q75AU1              	100.00%		C4Y8R8              	100.00%
Bootstrap support for Q75AU1 as seed ortholog is 100%.
Bootstrap support for C4Y8R8 as seed ortholog is 99%.

Group of orthologs #530. Best score 590 bits
Score difference with first non-orthologous sequence - A.gossypii:590 C.lusitaniae:590

Q75EG3              	100.00%		C4YB45              	100.00%
Bootstrap support for Q75EG3 as seed ortholog is 100%.
Bootstrap support for C4YB45 as seed ortholog is 100%.

Group of orthologs #531. Best score 589 bits
Score difference with first non-orthologous sequence - A.gossypii:589 C.lusitaniae:589

Q757E3              	100.00%		C4XW18              	100.00%
Bootstrap support for Q757E3 as seed ortholog is 100%.
Bootstrap support for C4XW18 as seed ortholog is 100%.

Group of orthologs #532. Best score 589 bits
Score difference with first non-orthologous sequence - A.gossypii:274 C.lusitaniae:314

Q756M2              	100.00%		C4Y763              	100.00%
Bootstrap support for Q756M2 as seed ortholog is 100%.
Bootstrap support for C4Y763 as seed ortholog is 100%.

Group of orthologs #533. Best score 588 bits
Score difference with first non-orthologous sequence - A.gossypii:588 C.lusitaniae:588

Q753H0              	100.00%		C4Y6J8              	100.00%
Bootstrap support for Q753H0 as seed ortholog is 100%.
Bootstrap support for C4Y6J8 as seed ortholog is 100%.

Group of orthologs #534. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:348 C.lusitaniae:587

Q756D3              	100.00%		C4XXF7              	100.00%
Bootstrap support for Q756D3 as seed ortholog is 100%.
Bootstrap support for C4XXF7 as seed ortholog is 100%.

Group of orthologs #535. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:587 C.lusitaniae:587

Q757S5              	100.00%		C4XZE7              	100.00%
Bootstrap support for Q757S5 as seed ortholog is 100%.
Bootstrap support for C4XZE7 as seed ortholog is 100%.

Group of orthologs #536. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:587 C.lusitaniae:587

Q752Q2              	100.00%		C4Y4C2              	100.00%
Bootstrap support for Q752Q2 as seed ortholog is 100%.
Bootstrap support for C4Y4C2 as seed ortholog is 100%.

Group of orthologs #537. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:587 C.lusitaniae:587

Q75AK9              	100.00%		C4XZQ9              	100.00%
Bootstrap support for Q75AK9 as seed ortholog is 100%.
Bootstrap support for C4XZQ9 as seed ortholog is 100%.

Group of orthologs #538. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:587 C.lusitaniae:587

Q75AE1              	100.00%		C4Y3B0              	100.00%
Bootstrap support for Q75AE1 as seed ortholog is 100%.
Bootstrap support for C4Y3B0 as seed ortholog is 100%.

Group of orthologs #539. Best score 587 bits
Score difference with first non-orthologous sequence - A.gossypii:587 C.lusitaniae:587

Q75EN8              	100.00%		C4Y9P9              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for C4Y9P9 as seed ortholog is 100%.

Group of orthologs #540. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:586 C.lusitaniae:586

Q759R3              	100.00%		C4XYN7              	100.00%
Bootstrap support for Q759R3 as seed ortholog is 100%.
Bootstrap support for C4XYN7 as seed ortholog is 100%.

Group of orthologs #541. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:586 C.lusitaniae:586

Q75AB0              	100.00%		C4XYM8              	100.00%
Bootstrap support for Q75AB0 as seed ortholog is 100%.
Bootstrap support for C4XYM8 as seed ortholog is 100%.

Group of orthologs #542. Best score 586 bits
Score difference with first non-orthologous sequence - A.gossypii:500 C.lusitaniae:586

Q9HFW2              	100.00%		C4XXA4              	100.00%
Bootstrap support for Q9HFW2 as seed ortholog is 100%.
Bootstrap support for C4XXA4 as seed ortholog is 100%.

Group of orthologs #543. Best score 585 bits
Score difference with first non-orthologous sequence - A.gossypii:585 C.lusitaniae:585

Q752Y2              	100.00%		C4Y2H2              	100.00%
Bootstrap support for Q752Y2 as seed ortholog is 100%.
Bootstrap support for C4Y2H2 as seed ortholog is 100%.

Group of orthologs #544. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:584 C.lusitaniae:584

Q74Z09              	100.00%		C4XWT9              	100.00%
Bootstrap support for Q74Z09 as seed ortholog is 100%.
Bootstrap support for C4XWT9 as seed ortholog is 100%.

Group of orthologs #545. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.lusitaniae:92

Q754N2              	100.00%		C4XYB3              	100.00%
Bootstrap support for Q754N2 as seed ortholog is 99%.
Bootstrap support for C4XYB3 as seed ortholog is 97%.

Group of orthologs #546. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:337 C.lusitaniae:584

Q754A6              	100.00%		C4XZV6              	100.00%
Bootstrap support for Q754A6 as seed ortholog is 100%.
Bootstrap support for C4XZV6 as seed ortholog is 100%.

Group of orthologs #547. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:309 C.lusitaniae:93

Q757K5              	100.00%		C4Y6X1              	100.00%
Bootstrap support for Q757K5 as seed ortholog is 100%.
Bootstrap support for C4Y6X1 as seed ortholog is 99%.

Group of orthologs #548. Best score 583 bits
Score difference with first non-orthologous sequence - A.gossypii:583 C.lusitaniae:1

Q759E1              	100.00%		C4XX89              	100.00%
Q759E0              	23.93%		
Bootstrap support for Q759E1 as seed ortholog is 100%.
Bootstrap support for C4XX89 as seed ortholog is 50%.
Alternative seed ortholog is C4Y8D4 (1 bits away from this cluster)

Group of orthologs #549. Best score 582 bits
Score difference with first non-orthologous sequence - A.gossypii:582 C.lusitaniae:438

Q74ZV7              	100.00%		C4Y195              	100.00%
Bootstrap support for Q74ZV7 as seed ortholog is 100%.
Bootstrap support for C4Y195 as seed ortholog is 100%.

Group of orthologs #550. Best score 582 bits
Score difference with first non-orthologous sequence - A.gossypii:582 C.lusitaniae:582

Q75AB9              	100.00%		C4XX31              	100.00%
Bootstrap support for Q75AB9 as seed ortholog is 100%.
Bootstrap support for C4XX31 as seed ortholog is 100%.

Group of orthologs #551. Best score 582 bits
Score difference with first non-orthologous sequence - A.gossypii:582 C.lusitaniae:582

Q75BC3              	100.00%		C4Y2H1              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for C4Y2H1 as seed ortholog is 100%.

Group of orthologs #552. Best score 581 bits
Score difference with first non-orthologous sequence - A.gossypii:581 C.lusitaniae:581

Q752W7              	100.00%		C4Y9Q2              	100.00%
Bootstrap support for Q752W7 as seed ortholog is 100%.
Bootstrap support for C4Y9Q2 as seed ortholog is 100%.

Group of orthologs #553. Best score 580 bits
Score difference with first non-orthologous sequence - A.gossypii:330 C.lusitaniae:350

Q757Q4              	100.00%		C4Y265              	100.00%
Bootstrap support for Q757Q4 as seed ortholog is 100%.
Bootstrap support for C4Y265 as seed ortholog is 100%.

Group of orthologs #554. Best score 580 bits
Score difference with first non-orthologous sequence - A.gossypii:580 C.lusitaniae:580

Q75BL8              	100.00%		C4Y197              	100.00%
Bootstrap support for Q75BL8 as seed ortholog is 100%.
Bootstrap support for C4Y197 as seed ortholog is 100%.

Group of orthologs #555. Best score 580 bits
Score difference with first non-orthologous sequence - A.gossypii:580 C.lusitaniae:580

Q750E7              	100.00%		C4YBV0              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 100%.
Bootstrap support for C4YBV0 as seed ortholog is 100%.

Group of orthologs #556. Best score 579 bits
Score difference with first non-orthologous sequence - A.gossypii:579 C.lusitaniae:579

Q75B59              	100.00%		C4XZV9              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for C4XZV9 as seed ortholog is 100%.

Group of orthologs #557. Best score 579 bits
Score difference with first non-orthologous sequence - A.gossypii:124 C.lusitaniae:180

Q75AS9              	100.00%		C4YCH8              	100.00%
Bootstrap support for Q75AS9 as seed ortholog is 99%.
Bootstrap support for C4YCH8 as seed ortholog is 99%.

Group of orthologs #558. Best score 578 bits
Score difference with first non-orthologous sequence - A.gossypii:414 C.lusitaniae:578

Q755S7              	100.00%		C4XYC1              	100.00%
Bootstrap support for Q755S7 as seed ortholog is 100%.
Bootstrap support for C4XYC1 as seed ortholog is 100%.

Group of orthologs #559. Best score 578 bits
Score difference with first non-orthologous sequence - A.gossypii:578 C.lusitaniae:578

Q754Q4              	100.00%		C4Y3C1              	100.00%
Bootstrap support for Q754Q4 as seed ortholog is 100%.
Bootstrap support for C4Y3C1 as seed ortholog is 100%.

Group of orthologs #560. Best score 578 bits
Score difference with first non-orthologous sequence - A.gossypii:340 C.lusitaniae:94

Q75EP1              	100.00%		C4Y9B2              	100.00%
Bootstrap support for Q75EP1 as seed ortholog is 100%.
Bootstrap support for C4Y9B2 as seed ortholog is 99%.

Group of orthologs #561. Best score 577 bits
Score difference with first non-orthologous sequence - A.gossypii:577 C.lusitaniae:577

Q752H4              	100.00%		C4Y4D7              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 100%.
Bootstrap support for C4Y4D7 as seed ortholog is 100%.

Group of orthologs #562. Best score 577 bits
Score difference with first non-orthologous sequence - A.gossypii:577 C.lusitaniae:577

Q75CQ5              	100.00%		C4XX79              	100.00%
Bootstrap support for Q75CQ5 as seed ortholog is 100%.
Bootstrap support for C4XX79 as seed ortholog is 100%.

Group of orthologs #563. Best score 577 bits
Score difference with first non-orthologous sequence - A.gossypii:577 C.lusitaniae:272

Q75DD5              	100.00%		C4XZI0              	100.00%
Bootstrap support for Q75DD5 as seed ortholog is 100%.
Bootstrap support for C4XZI0 as seed ortholog is 99%.

Group of orthologs #564. Best score 577 bits
Score difference with first non-orthologous sequence - A.gossypii:577 C.lusitaniae:577

Q754J7              	100.00%		C4YCK1              	100.00%
Bootstrap support for Q754J7 as seed ortholog is 100%.
Bootstrap support for C4YCK1 as seed ortholog is 100%.

Group of orthologs #565. Best score 577 bits
Score difference with first non-orthologous sequence - A.gossypii:577 C.lusitaniae:577

Q759V4              	100.00%		C4YAS1              	100.00%
Bootstrap support for Q759V4 as seed ortholog is 100%.
Bootstrap support for C4YAS1 as seed ortholog is 100%.

Group of orthologs #566. Best score 576 bits
Score difference with first non-orthologous sequence - A.gossypii:576 C.lusitaniae:576

Q752Z1              	100.00%		C4YBS8              	100.00%
Bootstrap support for Q752Z1 as seed ortholog is 100%.
Bootstrap support for C4YBS8 as seed ortholog is 100%.

Group of orthologs #567. Best score 576 bits
Score difference with first non-orthologous sequence - A.gossypii:576 C.lusitaniae:576

Q75AY6              	100.00%		C4Y7Y8              	100.00%
Bootstrap support for Q75AY6 as seed ortholog is 100%.
Bootstrap support for C4Y7Y8 as seed ortholog is 100%.

Group of orthologs #568. Best score 575 bits
Score difference with first non-orthologous sequence - A.gossypii:575 C.lusitaniae:575

Q75BB1              	100.00%		C4YAM0              	100.00%
Bootstrap support for Q75BB1 as seed ortholog is 100%.
Bootstrap support for C4YAM0 as seed ortholog is 100%.

Group of orthologs #569. Best score 574 bits
Score difference with first non-orthologous sequence - A.gossypii:574 C.lusitaniae:574

Q74Z01              	100.00%		C4Y5D6              	100.00%
Q74Z02              	54.00%		
Bootstrap support for Q74Z01 as seed ortholog is 100%.
Bootstrap support for C4Y5D6 as seed ortholog is 100%.

Group of orthologs #570. Best score 574 bits
Score difference with first non-orthologous sequence - A.gossypii:574 C.lusitaniae:505

Q759G0              	100.00%		C4XVW7              	100.00%
Bootstrap support for Q759G0 as seed ortholog is 100%.
Bootstrap support for C4XVW7 as seed ortholog is 100%.

Group of orthologs #571. Best score 574 bits
Score difference with first non-orthologous sequence - A.gossypii:574 C.lusitaniae:433

Q752E9              	100.00%		C4Y5X9              	100.00%
Bootstrap support for Q752E9 as seed ortholog is 100%.
Bootstrap support for C4Y5X9 as seed ortholog is 100%.

Group of orthologs #572. Best score 574 bits
Score difference with first non-orthologous sequence - A.gossypii:574 C.lusitaniae:574

Q752W6              	100.00%		C4Y9Q4              	100.00%
Bootstrap support for Q752W6 as seed ortholog is 100%.
Bootstrap support for C4Y9Q4 as seed ortholog is 100%.

Group of orthologs #573. Best score 573 bits
Score difference with first non-orthologous sequence - A.gossypii:573 C.lusitaniae:573

Q756G9              	100.00%		C4Y4A7              	100.00%
Bootstrap support for Q756G9 as seed ortholog is 100%.
Bootstrap support for C4Y4A7 as seed ortholog is 100%.

Group of orthologs #574. Best score 573 bits
Score difference with first non-orthologous sequence - A.gossypii:400 C.lusitaniae:573

Q75CE9              	100.00%		C4Y319              	100.00%
Bootstrap support for Q75CE9 as seed ortholog is 100%.
Bootstrap support for C4Y319 as seed ortholog is 100%.

Group of orthologs #575. Best score 572 bits
Score difference with first non-orthologous sequence - A.gossypii:572 C.lusitaniae:572

Q75DN3              	100.00%		C4XZT1              	100.00%
Bootstrap support for Q75DN3 as seed ortholog is 100%.
Bootstrap support for C4XZT1 as seed ortholog is 100%.

Group of orthologs #576. Best score 571 bits
Score difference with first non-orthologous sequence - A.gossypii:571 C.lusitaniae:571

Q758B8              	100.00%		C4XX49              	100.00%
Bootstrap support for Q758B8 as seed ortholog is 100%.
Bootstrap support for C4XX49 as seed ortholog is 100%.

Group of orthologs #577. Best score 570 bits
Score difference with first non-orthologous sequence - A.gossypii:570 C.lusitaniae:570

Q74ZD5              	100.00%		C4Y2Z9              	100.00%
Bootstrap support for Q74ZD5 as seed ortholog is 100%.
Bootstrap support for C4Y2Z9 as seed ortholog is 100%.

Group of orthologs #578. Best score 570 bits
Score difference with first non-orthologous sequence - A.gossypii:570 C.lusitaniae:570

Q75AR3              	100.00%		C4Y829              	100.00%
Bootstrap support for Q75AR3 as seed ortholog is 100%.
Bootstrap support for C4Y829 as seed ortholog is 100%.

Group of orthologs #579. Best score 569 bits
Score difference with first non-orthologous sequence - A.gossypii:380 C.lusitaniae:413

Q75DT9              	100.00%		C4Y8D1              	100.00%
Bootstrap support for Q75DT9 as seed ortholog is 100%.
Bootstrap support for C4Y8D1 as seed ortholog is 100%.

Group of orthologs #580. Best score 567 bits
Score difference with first non-orthologous sequence - A.gossypii:567 C.lusitaniae:567

Q74ZC8              	100.00%		C4Y8U1              	100.00%
Bootstrap support for Q74ZC8 as seed ortholog is 100%.
Bootstrap support for C4Y8U1 as seed ortholog is 100%.

Group of orthologs #581. Best score 567 bits
Score difference with first non-orthologous sequence - A.gossypii:567 C.lusitaniae:567

Q75E85              	100.00%		C4Y7Y4              	100.00%
Bootstrap support for Q75E85 as seed ortholog is 100%.
Bootstrap support for C4Y7Y4 as seed ortholog is 100%.

Group of orthologs #582. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:566 C.lusitaniae:566

Q75BI3              	100.00%		C4XZC6              	100.00%
Bootstrap support for Q75BI3 as seed ortholog is 100%.
Bootstrap support for C4XZC6 as seed ortholog is 100%.

Group of orthologs #583. Best score 566 bits
Score difference with first non-orthologous sequence - A.gossypii:566 C.lusitaniae:125

Q750Z5              	100.00%		C4Y970              	100.00%
Bootstrap support for Q750Z5 as seed ortholog is 100%.
Bootstrap support for C4Y970 as seed ortholog is 98%.

Group of orthologs #584. Best score 565 bits
Score difference with first non-orthologous sequence - A.gossypii:565 C.lusitaniae:565

Q75C84              	100.00%		C4Y7R9              	100.00%
Bootstrap support for Q75C84 as seed ortholog is 100%.
Bootstrap support for C4Y7R9 as seed ortholog is 100%.

Group of orthologs #585. Best score 565 bits
Score difference with first non-orthologous sequence - A.gossypii:565 C.lusitaniae:565

Q75BV3              	100.00%		C4Y8H7              	100.00%
Bootstrap support for Q75BV3 as seed ortholog is 100%.
Bootstrap support for C4Y8H7 as seed ortholog is 100%.

Group of orthologs #586. Best score 564 bits
Score difference with first non-orthologous sequence - A.gossypii:564 C.lusitaniae:564

Q754J8              	100.00%		C4XVQ2              	100.00%
Bootstrap support for Q754J8 as seed ortholog is 100%.
Bootstrap support for C4XVQ2 as seed ortholog is 100%.

Group of orthologs #587. Best score 564 bits
Score difference with first non-orthologous sequence - A.gossypii:564 C.lusitaniae:564

Q759V7              	100.00%		C4YAH4              	100.00%
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for C4YAH4 as seed ortholog is 100%.

Group of orthologs #588. Best score 563 bits
Score difference with first non-orthologous sequence - A.gossypii:563 C.lusitaniae:563

Q75F74              	100.00%		C4YA51              	100.00%
Bootstrap support for Q75F74 as seed ortholog is 100%.
Bootstrap support for C4YA51 as seed ortholog is 100%.

Group of orthologs #589. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 C.lusitaniae:562

Q74ZX3              	100.00%		C4XXQ1              	100.00%
Bootstrap support for Q74ZX3 as seed ortholog is 100%.
Bootstrap support for C4XXQ1 as seed ortholog is 100%.

Group of orthologs #590. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 C.lusitaniae:562

Q750F1              	100.00%		C4Y0L7              	100.00%
Bootstrap support for Q750F1 as seed ortholog is 100%.
Bootstrap support for C4Y0L7 as seed ortholog is 100%.

Group of orthologs #591. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 C.lusitaniae:562

Q755E4              	100.00%		C4Y288              	100.00%
Bootstrap support for Q755E4 as seed ortholog is 100%.
Bootstrap support for C4Y288 as seed ortholog is 100%.

Group of orthologs #592. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 C.lusitaniae:562

Q758X1              	100.00%		C4XZW5              	100.00%
Bootstrap support for Q758X1 as seed ortholog is 100%.
Bootstrap support for C4XZW5 as seed ortholog is 100%.

Group of orthologs #593. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 C.lusitaniae:562

Q752U0              	100.00%		C4Y839              	100.00%
Bootstrap support for Q752U0 as seed ortholog is 100%.
Bootstrap support for C4Y839 as seed ortholog is 100%.

Group of orthologs #594. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:562 C.lusitaniae:562

Q75F76              	100.00%		C4YA52              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for C4YA52 as seed ortholog is 100%.

Group of orthologs #595. Best score 561 bits
Score difference with first non-orthologous sequence - A.gossypii:561 C.lusitaniae:561

Q752Y3              	100.00%		C4Y1V0              	100.00%
Bootstrap support for Q752Y3 as seed ortholog is 100%.
Bootstrap support for C4Y1V0 as seed ortholog is 100%.

Group of orthologs #596. Best score 561 bits
Score difference with first non-orthologous sequence - A.gossypii:561 C.lusitaniae:561

Q751P7              	100.00%		C4Y3X0              	100.00%
Bootstrap support for Q751P7 as seed ortholog is 100%.
Bootstrap support for C4Y3X0 as seed ortholog is 100%.

Group of orthologs #597. Best score 561 bits
Score difference with first non-orthologous sequence - A.gossypii:561 C.lusitaniae:561

Q75AD4              	100.00%		C4Y1Q9              	100.00%
Bootstrap support for Q75AD4 as seed ortholog is 100%.
Bootstrap support for C4Y1Q9 as seed ortholog is 100%.

Group of orthologs #598. Best score 561 bits
Score difference with first non-orthologous sequence - A.gossypii:561 C.lusitaniae:561

Q75EW9              	100.00%		C4Y5B7              	100.00%
Bootstrap support for Q75EW9 as seed ortholog is 100%.
Bootstrap support for C4Y5B7 as seed ortholog is 100%.

Group of orthologs #599. Best score 559 bits
Score difference with first non-orthologous sequence - A.gossypii:559 C.lusitaniae:256

Q74Z46              	100.00%		C4Y7I8              	100.00%
Bootstrap support for Q74Z46 as seed ortholog is 100%.
Bootstrap support for C4Y7I8 as seed ortholog is 100%.

Group of orthologs #600. Best score 559 bits
Score difference with first non-orthologous sequence - A.gossypii:559 C.lusitaniae:559

Q74ZH6              	100.00%		C4YA37              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for C4YA37 as seed ortholog is 100%.

Group of orthologs #601. Best score 559 bits
Score difference with first non-orthologous sequence - A.gossypii:559 C.lusitaniae:559

Q75AZ9              	100.00%		C4Y1K2              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for C4Y1K2 as seed ortholog is 100%.

Group of orthologs #602. Best score 559 bits
Score difference with first non-orthologous sequence - A.gossypii:376 C.lusitaniae:425

Q756Q9              	100.00%		C4YB48              	100.00%
Bootstrap support for Q756Q9 as seed ortholog is 100%.
Bootstrap support for C4YB48 as seed ortholog is 100%.

Group of orthologs #603. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:52 C.lusitaniae:60

Q75EJ5              	100.00%		C4Y0U5              	100.00%
Q757I1              	56.05%		C4XW48              	39.07%
Bootstrap support for Q75EJ5 as seed ortholog is 97%.
Bootstrap support for C4Y0U5 as seed ortholog is 98%.

Group of orthologs #604. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 C.lusitaniae:557

Q756J5              	100.00%		C4Y145              	100.00%
Bootstrap support for Q756J5 as seed ortholog is 100%.
Bootstrap support for C4Y145 as seed ortholog is 100%.

Group of orthologs #605. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 C.lusitaniae:557

Q754X1              	100.00%		C4Y7W1              	100.00%
Bootstrap support for Q754X1 as seed ortholog is 100%.
Bootstrap support for C4Y7W1 as seed ortholog is 100%.

Group of orthologs #606. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 C.lusitaniae:557

Q75BY2              	100.00%		C4Y336              	100.00%
Bootstrap support for Q75BY2 as seed ortholog is 100%.
Bootstrap support for C4Y336 as seed ortholog is 100%.

Group of orthologs #607. Best score 557 bits
Score difference with first non-orthologous sequence - A.gossypii:557 C.lusitaniae:557

Q75EW4              	100.00%		C4Y2A5              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for C4Y2A5 as seed ortholog is 100%.

Group of orthologs #608. Best score 556 bits
Score difference with first non-orthologous sequence - A.gossypii:556 C.lusitaniae:556

Q754W3              	100.00%		C4XX45              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for C4XX45 as seed ortholog is 100%.

Group of orthologs #609. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 C.lusitaniae:555

Q755Y2              	100.00%		C4XX34              	100.00%
Bootstrap support for Q755Y2 as seed ortholog is 100%.
Bootstrap support for C4XX34 as seed ortholog is 100%.

Group of orthologs #610. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 C.lusitaniae:555

Q74ZX0              	100.00%		C4Y5H2              	100.00%
Bootstrap support for Q74ZX0 as seed ortholog is 100%.
Bootstrap support for C4Y5H2 as seed ortholog is 100%.

Group of orthologs #611. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 C.lusitaniae:555

Q75E74              	100.00%		C4XVR9              	100.00%
Bootstrap support for Q75E74 as seed ortholog is 100%.
Bootstrap support for C4XVR9 as seed ortholog is 100%.

Group of orthologs #612. Best score 555 bits
Score difference with first non-orthologous sequence - A.gossypii:555 C.lusitaniae:295

Q75EJ7              	100.00%		C4Y298              	100.00%
Bootstrap support for Q75EJ7 as seed ortholog is 100%.
Bootstrap support for C4Y298 as seed ortholog is 100%.

Group of orthologs #613. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 C.lusitaniae:554

Q752E6              	100.00%		C4XXR1              	100.00%
Bootstrap support for Q752E6 as seed ortholog is 100%.
Bootstrap support for C4XXR1 as seed ortholog is 100%.

Group of orthologs #614. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 C.lusitaniae:554

Q750P2              	100.00%		C4Y161              	100.00%
Bootstrap support for Q750P2 as seed ortholog is 100%.
Bootstrap support for C4Y161 as seed ortholog is 100%.

Group of orthologs #615. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 C.lusitaniae:459

Q75CH3              	100.00%		C4XZL2              	100.00%
Bootstrap support for Q75CH3 as seed ortholog is 100%.
Bootstrap support for C4XZL2 as seed ortholog is 100%.

Group of orthologs #616. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:554 C.lusitaniae:554

Q74ZY7              	100.00%		C4YAT3              	100.00%
Bootstrap support for Q74ZY7 as seed ortholog is 100%.
Bootstrap support for C4YAT3 as seed ortholog is 100%.

Group of orthologs #617. Best score 553 bits
Score difference with first non-orthologous sequence - A.gossypii:553 C.lusitaniae:553

Q757D0              	100.00%		C4Y5I6              	100.00%
Bootstrap support for Q757D0 as seed ortholog is 100%.
Bootstrap support for C4Y5I6 as seed ortholog is 100%.

Group of orthologs #618. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:552 C.lusitaniae:552

Q753X4              	100.00%		C4Y027              	100.00%
Bootstrap support for Q753X4 as seed ortholog is 100%.
Bootstrap support for C4Y027 as seed ortholog is 100%.

Group of orthologs #619. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:356 C.lusitaniae:97

Q75A29              	100.00%		C4Y175              	100.00%
Bootstrap support for Q75A29 as seed ortholog is 100%.
Bootstrap support for C4Y175 as seed ortholog is 99%.

Group of orthologs #620. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:552 C.lusitaniae:552

Q759G6              	100.00%		C4Y3Z8              	100.00%
Bootstrap support for Q759G6 as seed ortholog is 100%.
Bootstrap support for C4Y3Z8 as seed ortholog is 100%.

Group of orthologs #621. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:552 C.lusitaniae:552

Q756N0              	100.00%		C4Y8F4              	100.00%
Bootstrap support for Q756N0 as seed ortholog is 100%.
Bootstrap support for C4Y8F4 as seed ortholog is 100%.

Group of orthologs #622. Best score 552 bits
Score difference with first non-orthologous sequence - A.gossypii:552 C.lusitaniae:121

Q75AK1              	100.00%		C4Y7J5              	100.00%
Bootstrap support for Q75AK1 as seed ortholog is 100%.
Bootstrap support for C4Y7J5 as seed ortholog is 99%.

Group of orthologs #623. Best score 551 bits
Score difference with first non-orthologous sequence - A.gossypii:551 C.lusitaniae:551

Q75ER2              	100.00%		C4Y9K3              	100.00%
Bootstrap support for Q75ER2 as seed ortholog is 100%.
Bootstrap support for C4Y9K3 as seed ortholog is 100%.

Group of orthologs #624. Best score 550 bits
Score difference with first non-orthologous sequence - A.gossypii:550 C.lusitaniae:473

Q755U9              	100.00%		C4Y2P3              	100.00%
Bootstrap support for Q755U9 as seed ortholog is 100%.
Bootstrap support for C4Y2P3 as seed ortholog is 100%.

Group of orthologs #625. Best score 550 bits
Score difference with first non-orthologous sequence - A.gossypii:550 C.lusitaniae:550

Q757Y8              	100.00%		C4Y9S1              	100.00%
Bootstrap support for Q757Y8 as seed ortholog is 100%.
Bootstrap support for C4Y9S1 as seed ortholog is 100%.

Group of orthologs #626. Best score 549 bits
Score difference with first non-orthologous sequence - A.gossypii:549 C.lusitaniae:549

Q74ZK4              	100.00%		C4XZ89              	100.00%
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for C4XZ89 as seed ortholog is 100%.

Group of orthologs #627. Best score 549 bits
Score difference with first non-orthologous sequence - A.gossypii:281 C.lusitaniae:351

Q75B34              	100.00%		C4Y6Y8              	100.00%
Bootstrap support for Q75B34 as seed ortholog is 100%.
Bootstrap support for C4Y6Y8 as seed ortholog is 100%.

Group of orthologs #628. Best score 548 bits
Score difference with first non-orthologous sequence - A.gossypii:548 C.lusitaniae:548

Q753X7              	100.00%		C4Y3H5              	100.00%
Bootstrap support for Q753X7 as seed ortholog is 100%.
Bootstrap support for C4Y3H5 as seed ortholog is 100%.

Group of orthologs #629. Best score 548 bits
Score difference with first non-orthologous sequence - A.gossypii:548 C.lusitaniae:548

Q75C06              	100.00%		C4Y474              	100.00%
Bootstrap support for Q75C06 as seed ortholog is 100%.
Bootstrap support for C4Y474 as seed ortholog is 100%.

Group of orthologs #630. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:547 C.lusitaniae:547

Q74Z50              	100.00%		C4XXY5              	100.00%
Bootstrap support for Q74Z50 as seed ortholog is 100%.
Bootstrap support for C4XXY5 as seed ortholog is 100%.

Group of orthologs #631. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:547 C.lusitaniae:547

Q755W0              	100.00%		C4Y462              	100.00%
Bootstrap support for Q755W0 as seed ortholog is 100%.
Bootstrap support for C4Y462 as seed ortholog is 100%.

Group of orthologs #632. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:547 C.lusitaniae:547

Q75DG6              	100.00%		C4Y2X5              	100.00%
Bootstrap support for Q75DG6 as seed ortholog is 100%.
Bootstrap support for C4Y2X5 as seed ortholog is 100%.

Group of orthologs #633. Best score 547 bits
Score difference with first non-orthologous sequence - A.gossypii:547 C.lusitaniae:547

Q753E5              	100.00%		C4YBT2              	100.00%
Bootstrap support for Q753E5 as seed ortholog is 100%.
Bootstrap support for C4YBT2 as seed ortholog is 100%.

Group of orthologs #634. Best score 546 bits
Score difference with first non-orthologous sequence - A.gossypii:546 C.lusitaniae:546

Q751Z2              	100.00%		C4Y789              	100.00%
Bootstrap support for Q751Z2 as seed ortholog is 100%.
Bootstrap support for C4Y789 as seed ortholog is 100%.

Group of orthologs #635. Best score 545 bits
Score difference with first non-orthologous sequence - A.gossypii:545 C.lusitaniae:545

Q753X2              	100.00%		C4Y7N2              	100.00%
Bootstrap support for Q753X2 as seed ortholog is 100%.
Bootstrap support for C4Y7N2 as seed ortholog is 100%.

Group of orthologs #636. Best score 544 bits
Score difference with first non-orthologous sequence - A.gossypii:544 C.lusitaniae:404

Q753V5              	100.00%		C4XWL2              	100.00%
Bootstrap support for Q753V5 as seed ortholog is 100%.
Bootstrap support for C4XWL2 as seed ortholog is 100%.

Group of orthologs #637. Best score 544 bits
Score difference with first non-orthologous sequence - A.gossypii:544 C.lusitaniae:544

Q75C45              	100.00%		C4Y8Z9              	100.00%
Bootstrap support for Q75C45 as seed ortholog is 100%.
Bootstrap support for C4Y8Z9 as seed ortholog is 100%.

Group of orthologs #638. Best score 543 bits
Score difference with first non-orthologous sequence - A.gossypii:8 C.lusitaniae:543

Q752H5              	100.00%		C4Y7Z3              	100.00%
                    	       		C4YBL0              	8.42%
Bootstrap support for Q752H5 as seed ortholog is 54%.
Alternative seed ortholog is Q75DA0 (8 bits away from this cluster)
Bootstrap support for C4Y7Z3 as seed ortholog is 100%.

Group of orthologs #639. Best score 543 bits
Score difference with first non-orthologous sequence - A.gossypii:543 C.lusitaniae:543

Q74ZI3              	100.00%		C4YA87              	100.00%
Bootstrap support for Q74ZI3 as seed ortholog is 100%.
Bootstrap support for C4YA87 as seed ortholog is 100%.

Group of orthologs #640. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:169 C.lusitaniae:542

Q756Q2              	100.00%		C4XZN8              	100.00%
Bootstrap support for Q756Q2 as seed ortholog is 100%.
Bootstrap support for C4XZN8 as seed ortholog is 100%.

Group of orthologs #641. Best score 542 bits
Score difference with first non-orthologous sequence - A.gossypii:542 C.lusitaniae:542

Q75AB5              	100.00%		C4Y7K6              	100.00%
Bootstrap support for Q75AB5 as seed ortholog is 100%.
Bootstrap support for C4Y7K6 as seed ortholog is 100%.

Group of orthologs #642. Best score 541 bits
Score difference with first non-orthologous sequence - A.gossypii:541 C.lusitaniae:541

Q75E00              	100.00%		C4XW88              	100.00%
Bootstrap support for Q75E00 as seed ortholog is 100%.
Bootstrap support for C4XW88 as seed ortholog is 100%.

Group of orthologs #643. Best score 540 bits
Score difference with first non-orthologous sequence - A.gossypii:540 C.lusitaniae:540

Q750E3              	100.00%		C4XVN8              	100.00%
Bootstrap support for Q750E3 as seed ortholog is 100%.
Bootstrap support for C4XVN8 as seed ortholog is 100%.

Group of orthologs #644. Best score 540 bits
Score difference with first non-orthologous sequence - A.gossypii:540 C.lusitaniae:540

Q750S7              	100.00%		C4Y604              	100.00%
Bootstrap support for Q750S7 as seed ortholog is 100%.
Bootstrap support for C4Y604 as seed ortholog is 100%.

Group of orthologs #645. Best score 540 bits
Score difference with first non-orthologous sequence - A.gossypii:368 C.lusitaniae:367

Q758A3              	100.00%		C4Y131              	100.00%
Bootstrap support for Q758A3 as seed ortholog is 100%.
Bootstrap support for C4Y131 as seed ortholog is 100%.

Group of orthologs #646. Best score 540 bits
Score difference with first non-orthologous sequence - A.gossypii:540 C.lusitaniae:540

Q754I8              	100.00%		C4YC55              	100.00%
Bootstrap support for Q754I8 as seed ortholog is 100%.
Bootstrap support for C4YC55 as seed ortholog is 100%.

Group of orthologs #647. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 C.lusitaniae:539

Q758R9              	100.00%		C4XYZ6              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 100%.
Bootstrap support for C4XYZ6 as seed ortholog is 100%.

Group of orthologs #648. Best score 539 bits
Score difference with first non-orthologous sequence - A.gossypii:539 C.lusitaniae:539

Q75A30              	100.00%		C4XZQ2              	100.00%
Bootstrap support for Q75A30 as seed ortholog is 100%.
Bootstrap support for C4XZQ2 as seed ortholog is 100%.

Group of orthologs #649. Best score 538 bits
Score difference with first non-orthologous sequence - A.gossypii:538 C.lusitaniae:538

Q756A9              	100.00%		C4XW33              	100.00%
                    	       		C4XXM5              	25.66%
                    	       		C4XXM4              	14.61%
Bootstrap support for Q756A9 as seed ortholog is 100%.
Bootstrap support for C4XW33 as seed ortholog is 100%.

Group of orthologs #650. Best score 538 bits
Score difference with first non-orthologous sequence - A.gossypii:538 C.lusitaniae:538

Q751A4              	100.00%		C4XXI3              	100.00%
Bootstrap support for Q751A4 as seed ortholog is 100%.
Bootstrap support for C4XXI3 as seed ortholog is 100%.

Group of orthologs #651. Best score 538 bits
Score difference with first non-orthologous sequence - A.gossypii:538 C.lusitaniae:538

Q753E0              	100.00%		C4Y152              	100.00%
Bootstrap support for Q753E0 as seed ortholog is 100%.
Bootstrap support for C4Y152 as seed ortholog is 100%.

Group of orthologs #652. Best score 538 bits
Score difference with first non-orthologous sequence - A.gossypii:538 C.lusitaniae:538

Q75E89              	100.00%		C4Y874              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for C4Y874 as seed ortholog is 100%.

Group of orthologs #653. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:537 C.lusitaniae:537

Q74ZF6              	100.00%		C4Y7R5              	100.00%
Bootstrap support for Q74ZF6 as seed ortholog is 100%.
Bootstrap support for C4Y7R5 as seed ortholog is 100%.

Group of orthologs #654. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:537 C.lusitaniae:537

Q75A47              	100.00%		C4Y171              	100.00%
Bootstrap support for Q75A47 as seed ortholog is 100%.
Bootstrap support for C4Y171 as seed ortholog is 100%.

Group of orthologs #655. Best score 537 bits
Score difference with first non-orthologous sequence - A.gossypii:537 C.lusitaniae:537

Q758U0              	100.00%		C4Y6N6              	100.00%
Bootstrap support for Q758U0 as seed ortholog is 100%.
Bootstrap support for C4Y6N6 as seed ortholog is 100%.

Group of orthologs #656. Best score 536 bits
Score difference with first non-orthologous sequence - A.gossypii:536 C.lusitaniae:536

Q750Q5              	100.00%		C4Y392              	100.00%
Bootstrap support for Q750Q5 as seed ortholog is 100%.
Bootstrap support for C4Y392 as seed ortholog is 100%.

Group of orthologs #657. Best score 536 bits
Score difference with first non-orthologous sequence - A.gossypii:536 C.lusitaniae:536

Q751T0              	100.00%		C4Y9L3              	100.00%
Bootstrap support for Q751T0 as seed ortholog is 100%.
Bootstrap support for C4Y9L3 as seed ortholog is 100%.

Group of orthologs #658. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 C.lusitaniae:535

Q754W2              	100.00%		C4XX50              	100.00%
Bootstrap support for Q754W2 as seed ortholog is 100%.
Bootstrap support for C4XX50 as seed ortholog is 100%.

Group of orthologs #659. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 C.lusitaniae:332

Q759P4              	100.00%		C4XXC4              	100.00%
Bootstrap support for Q759P4 as seed ortholog is 100%.
Bootstrap support for C4XXC4 as seed ortholog is 100%.

Group of orthologs #660. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 C.lusitaniae:535

Q751S5              	100.00%		C4Y894              	100.00%
Bootstrap support for Q751S5 as seed ortholog is 100%.
Bootstrap support for C4Y894 as seed ortholog is 100%.

Group of orthologs #661. Best score 535 bits
Score difference with first non-orthologous sequence - A.gossypii:535 C.lusitaniae:271

Q75BL5              	100.00%		C4Y199              	100.00%
Bootstrap support for Q75BL5 as seed ortholog is 100%.
Bootstrap support for C4Y199 as seed ortholog is 100%.

Group of orthologs #662. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 C.lusitaniae:534

Q750F8              	100.00%		C4Y7T5              	100.00%
Bootstrap support for Q750F8 as seed ortholog is 100%.
Bootstrap support for C4Y7T5 as seed ortholog is 100%.

Group of orthologs #663. Best score 534 bits
Score difference with first non-orthologous sequence - A.gossypii:534 C.lusitaniae:92

Q75DQ2              	100.00%		C4Y2A4              	100.00%
Bootstrap support for Q75DQ2 as seed ortholog is 100%.
Bootstrap support for C4Y2A4 as seed ortholog is 99%.

Group of orthologs #664. Best score 533 bits
Score difference with first non-orthologous sequence - A.gossypii:533 C.lusitaniae:533

Q75DZ9              	100.00%		C4XW91              	100.00%
Bootstrap support for Q75DZ9 as seed ortholog is 100%.
Bootstrap support for C4XW91 as seed ortholog is 100%.

Group of orthologs #665. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:532 C.lusitaniae:532

Q754X7              	100.00%		C4Y6K6              	100.00%
Bootstrap support for Q754X7 as seed ortholog is 100%.
Bootstrap support for C4Y6K6 as seed ortholog is 100%.

Group of orthologs #666. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:532 C.lusitaniae:532

Q75EF7              	100.00%		C4Y273              	100.00%
Bootstrap support for Q75EF7 as seed ortholog is 100%.
Bootstrap support for C4Y273 as seed ortholog is 100%.

Group of orthologs #667. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:206 C.lusitaniae:532

Q75BP5              	100.00%		C4Y6H8              	100.00%
Bootstrap support for Q75BP5 as seed ortholog is 100%.
Bootstrap support for C4Y6H8 as seed ortholog is 100%.

Group of orthologs #668. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:532 C.lusitaniae:532

Q75CL4              	100.00%		C4YBW3              	100.00%
Bootstrap support for Q75CL4 as seed ortholog is 100%.
Bootstrap support for C4YBW3 as seed ortholog is 100%.

Group of orthologs #669. Best score 532 bits
Score difference with first non-orthologous sequence - A.gossypii:532 C.lusitaniae:532

Q75CF4              	100.00%		C4YCC0              	100.00%
Bootstrap support for Q75CF4 as seed ortholog is 100%.
Bootstrap support for C4YCC0 as seed ortholog is 100%.

Group of orthologs #670. Best score 530 bits
Score difference with first non-orthologous sequence - A.gossypii:530 C.lusitaniae:530

Q754R0              	100.00%		C4Y6A8              	100.00%
Bootstrap support for Q754R0 as seed ortholog is 100%.
Bootstrap support for C4Y6A8 as seed ortholog is 100%.

Group of orthologs #671. Best score 529 bits
Score difference with first non-orthologous sequence - A.gossypii:529 C.lusitaniae:529

Q757Y4              	100.00%		C4Y4N5              	100.00%
Bootstrap support for Q757Y4 as seed ortholog is 100%.
Bootstrap support for C4Y4N5 as seed ortholog is 100%.

Group of orthologs #672. Best score 529 bits
Score difference with first non-orthologous sequence - A.gossypii:529 C.lusitaniae:96

Q756E4              	100.00%		C4Y691              	100.00%
Bootstrap support for Q756E4 as seed ortholog is 100%.
Bootstrap support for C4Y691 as seed ortholog is 99%.

Group of orthologs #673. Best score 529 bits
Score difference with first non-orthologous sequence - A.gossypii:529 C.lusitaniae:529

Q759C6              	100.00%		C4YAP1              	100.00%
Bootstrap support for Q759C6 as seed ortholog is 100%.
Bootstrap support for C4YAP1 as seed ortholog is 100%.

Group of orthologs #674. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:14 C.lusitaniae:164

Q755W3              	100.00%		C4Y4U9              	100.00%
                    	       		C4Y8H1              	6.10%
Bootstrap support for Q755W3 as seed ortholog is 67%.
Alternative seed ortholog is Q74Z84 (14 bits away from this cluster)
Bootstrap support for C4Y4U9 as seed ortholog is 99%.

Group of orthologs #675. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:527 C.lusitaniae:527

Q750W4              	100.00%		C4XW14              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for C4XW14 as seed ortholog is 100%.

Group of orthologs #676. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:527 C.lusitaniae:527

Q75B51              	100.00%		C4Y488              	100.00%
Bootstrap support for Q75B51 as seed ortholog is 100%.
Bootstrap support for C4Y488 as seed ortholog is 100%.

Group of orthologs #677. Best score 527 bits
Score difference with first non-orthologous sequence - A.gossypii:527 C.lusitaniae:527

Q753A0              	100.00%		C4YBX7              	100.00%
Bootstrap support for Q753A0 as seed ortholog is 100%.
Bootstrap support for C4YBX7 as seed ortholog is 100%.

Group of orthologs #678. Best score 525 bits
Score difference with first non-orthologous sequence - A.gossypii:525 C.lusitaniae:525

Q758U3              	100.00%		C4Y2M1              	100.00%
Bootstrap support for Q758U3 as seed ortholog is 100%.
Bootstrap support for C4Y2M1 as seed ortholog is 100%.

Group of orthologs #679. Best score 524 bits
Score difference with first non-orthologous sequence - A.gossypii:524 C.lusitaniae:449

Q75ED5              	100.00%		C4Y2P1              	100.00%
Bootstrap support for Q75ED5 as seed ortholog is 100%.
Bootstrap support for C4Y2P1 as seed ortholog is 100%.

Group of orthologs #680. Best score 524 bits
Score difference with first non-orthologous sequence - A.gossypii:524 C.lusitaniae:524

Q75D27              	100.00%		C4Y6T8              	100.00%
Bootstrap support for Q75D27 as seed ortholog is 100%.
Bootstrap support for C4Y6T8 as seed ortholog is 100%.

Group of orthologs #681. Best score 523 bits
Score difference with first non-orthologous sequence - A.gossypii:523 C.lusitaniae:523

Q75BH2              	100.00%		C4Y1P2              	100.00%
Bootstrap support for Q75BH2 as seed ortholog is 100%.
Bootstrap support for C4Y1P2 as seed ortholog is 100%.

Group of orthologs #682. Best score 523 bits
Score difference with first non-orthologous sequence - A.gossypii:523 C.lusitaniae:523

Q75F62              	100.00%		C4Y0T6              	100.00%
Bootstrap support for Q75F62 as seed ortholog is 100%.
Bootstrap support for C4Y0T6 as seed ortholog is 100%.

Group of orthologs #683. Best score 522 bits
Score difference with first non-orthologous sequence - A.gossypii:522 C.lusitaniae:522

Q75ET3              	100.00%		C4YB54              	100.00%
Bootstrap support for Q75ET3 as seed ortholog is 100%.
Bootstrap support for C4YB54 as seed ortholog is 100%.

Group of orthologs #684. Best score 521 bits
Score difference with first non-orthologous sequence - A.gossypii:521 C.lusitaniae:146

Q75CA0              	100.00%		C4XVW3              	100.00%
Bootstrap support for Q75CA0 as seed ortholog is 100%.
Bootstrap support for C4XVW3 as seed ortholog is 99%.

Group of orthologs #685. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 C.lusitaniae:331

Q750M5              	100.00%		C4XVX6              	100.00%
Bootstrap support for Q750M5 as seed ortholog is 100%.
Bootstrap support for C4XVX6 as seed ortholog is 100%.

Group of orthologs #686. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 C.lusitaniae:520

Q753Q6              	100.00%		C4YBS9              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 100%.
Bootstrap support for C4YBS9 as seed ortholog is 100%.

Group of orthologs #687. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 C.lusitaniae:520

Q756D0              	100.00%		C4YBE0              	100.00%
Bootstrap support for Q756D0 as seed ortholog is 100%.
Bootstrap support for C4YBE0 as seed ortholog is 100%.

Group of orthologs #688. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 C.lusitaniae:520

Q75EB0              	100.00%		C4Y4H6              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for C4Y4H6 as seed ortholog is 100%.

Group of orthologs #689. Best score 520 bits
Score difference with first non-orthologous sequence - A.gossypii:520 C.lusitaniae:520

Q757P6              	100.00%		C4YCJ9              	100.00%
Bootstrap support for Q757P6 as seed ortholog is 100%.
Bootstrap support for C4YCJ9 as seed ortholog is 100%.

Group of orthologs #690. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q751B0              	100.00%		C4XZW3              	100.00%
Bootstrap support for Q751B0 as seed ortholog is 100%.
Bootstrap support for C4XZW3 as seed ortholog is 100%.

Group of orthologs #691. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q751H7              	100.00%		C4XZQ3              	100.00%
Bootstrap support for Q751H7 as seed ortholog is 100%.
Bootstrap support for C4XZQ3 as seed ortholog is 100%.

Group of orthologs #692. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q755S1              	100.00%		C4XX88              	100.00%
Bootstrap support for Q755S1 as seed ortholog is 100%.
Bootstrap support for C4XX88 as seed ortholog is 100%.

Group of orthologs #693. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q74ZM8              	100.00%		C4Y3H9              	100.00%
Bootstrap support for Q74ZM8 as seed ortholog is 100%.
Bootstrap support for C4Y3H9 as seed ortholog is 100%.

Group of orthologs #694. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:420

Q75C94              	100.00%		C4XVZ4              	100.00%
Bootstrap support for Q75C94 as seed ortholog is 100%.
Bootstrap support for C4XVZ4 as seed ortholog is 100%.

Group of orthologs #695. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q75CB2              	100.00%		C4XX47              	100.00%
Bootstrap support for Q75CB2 as seed ortholog is 100%.
Bootstrap support for C4XX47 as seed ortholog is 100%.

Group of orthologs #696. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q756A3              	100.00%		C4Y2V1              	100.00%
Bootstrap support for Q756A3 as seed ortholog is 100%.
Bootstrap support for C4Y2V1 as seed ortholog is 100%.

Group of orthologs #697. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q757K8              	100.00%		C4Y822              	100.00%
Bootstrap support for Q757K8 as seed ortholog is 100%.
Bootstrap support for C4Y822 as seed ortholog is 100%.

Group of orthologs #698. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:54 C.lusitaniae:475

Q759L4              	100.00%		C4Y7S9              	100.00%
Bootstrap support for Q759L4 as seed ortholog is 88%.
Bootstrap support for C4Y7S9 as seed ortholog is 100%.

Group of orthologs #699. Best score 519 bits
Score difference with first non-orthologous sequence - A.gossypii:519 C.lusitaniae:519

Q75B42              	100.00%		C4YA36              	100.00%
Bootstrap support for Q75B42 as seed ortholog is 100%.
Bootstrap support for C4YA36 as seed ortholog is 100%.

Group of orthologs #700. Best score 518 bits
Score difference with first non-orthologous sequence - A.gossypii:518 C.lusitaniae:518

Q756U4              	100.00%		C4XZJ1              	100.00%
Bootstrap support for Q756U4 as seed ortholog is 100%.
Bootstrap support for C4XZJ1 as seed ortholog is 100%.

Group of orthologs #701. Best score 518 bits
Score difference with first non-orthologous sequence - A.gossypii:518 C.lusitaniae:518

Q757Q5              	100.00%		C4Y710              	100.00%
Bootstrap support for Q757Q5 as seed ortholog is 100%.
Bootstrap support for C4Y710 as seed ortholog is 100%.

Group of orthologs #702. Best score 518 bits
Score difference with first non-orthologous sequence - A.gossypii:518 C.lusitaniae:518

Q75CL7              	100.00%		C4YBW2              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for C4YBW2 as seed ortholog is 100%.

Group of orthologs #703. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:517 C.lusitaniae:517

Q75BT1              	100.00%		C4Y030              	100.00%
Bootstrap support for Q75BT1 as seed ortholog is 100%.
Bootstrap support for C4Y030 as seed ortholog is 100%.

Group of orthologs #704. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:149 C.lusitaniae:221

Q75B57              	100.00%		C4Y0U1              	100.00%
Bootstrap support for Q75B57 as seed ortholog is 99%.
Bootstrap support for C4Y0U1 as seed ortholog is 99%.

Group of orthologs #705. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:133 C.lusitaniae:517

Q75AN1              	100.00%		C4Y4E2              	100.00%
Bootstrap support for Q75AN1 as seed ortholog is 98%.
Bootstrap support for C4Y4E2 as seed ortholog is 100%.

Group of orthologs #706. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:517 C.lusitaniae:517

Q75AF6              	100.00%		C4Y884              	100.00%
Bootstrap support for Q75AF6 as seed ortholog is 100%.
Bootstrap support for C4Y884 as seed ortholog is 100%.

Group of orthologs #707. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:246 C.lusitaniae:72

Q754B4              	100.00%		C4XVQ3              	100.00%
Bootstrap support for Q754B4 as seed ortholog is 100%.
Bootstrap support for C4XVQ3 as seed ortholog is 92%.

Group of orthologs #708. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:515 C.lusitaniae:515

Q752B2              	100.00%		C4Y412              	100.00%
Bootstrap support for Q752B2 as seed ortholog is 100%.
Bootstrap support for C4Y412 as seed ortholog is 100%.

Group of orthologs #709. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:515 C.lusitaniae:515

Q758H3              	100.00%		C4Y4A1              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for C4Y4A1 as seed ortholog is 100%.

Group of orthologs #710. Best score 515 bits
Score difference with first non-orthologous sequence - A.gossypii:515 C.lusitaniae:515

Q75B10              	100.00%		C4Y5X1              	100.00%
Bootstrap support for Q75B10 as seed ortholog is 100%.
Bootstrap support for C4Y5X1 as seed ortholog is 100%.

Group of orthologs #711. Best score 514 bits
Score difference with first non-orthologous sequence - A.gossypii:145 C.lusitaniae:251

Q75AM1              	100.00%		C4XWQ0              	100.00%
Bootstrap support for Q75AM1 as seed ortholog is 99%.
Bootstrap support for C4XWQ0 as seed ortholog is 100%.

Group of orthologs #712. Best score 513 bits
Score difference with first non-orthologous sequence - A.gossypii:513 C.lusitaniae:513

Q757T0              	100.00%		C4YBB8              	100.00%
Bootstrap support for Q757T0 as seed ortholog is 100%.
Bootstrap support for C4YBB8 as seed ortholog is 100%.

Group of orthologs #713. Best score 513 bits
Score difference with first non-orthologous sequence - A.gossypii:513 C.lusitaniae:513

Q75BV4              	100.00%		C4Y8H9              	100.00%
Bootstrap support for Q75BV4 as seed ortholog is 100%.
Bootstrap support for C4Y8H9 as seed ortholog is 100%.

Group of orthologs #714. Best score 513 bits
Score difference with first non-orthologous sequence - A.gossypii:513 C.lusitaniae:513

Q75F36              	100.00%		C4Y6C6              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for C4Y6C6 as seed ortholog is 100%.

Group of orthologs #715. Best score 512 bits
Score difference with first non-orthologous sequence - A.gossypii:512 C.lusitaniae:512

Q75E36              	100.00%		C4Y2Q9              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for C4Y2Q9 as seed ortholog is 100%.

Group of orthologs #716. Best score 511 bits
Score difference with first non-orthologous sequence - A.gossypii:511 C.lusitaniae:511

Q755K9              	100.00%		C4Y0L5              	100.00%
Bootstrap support for Q755K9 as seed ortholog is 100%.
Bootstrap support for C4Y0L5 as seed ortholog is 100%.

Group of orthologs #717. Best score 511 bits
Score difference with first non-orthologous sequence - A.gossypii:511 C.lusitaniae:511

Q759V5              	100.00%		C4YAR2              	100.00%
Bootstrap support for Q759V5 as seed ortholog is 100%.
Bootstrap support for C4YAR2 as seed ortholog is 100%.

Group of orthologs #718. Best score 510 bits
Score difference with first non-orthologous sequence - A.gossypii:210 C.lusitaniae:172

Q75CQ4              	100.00%		C4Y7E1              	100.00%
                    	       		C4Y7E2              	10.51%
Bootstrap support for Q75CQ4 as seed ortholog is 100%.
Bootstrap support for C4Y7E1 as seed ortholog is 99%.

Group of orthologs #719. Best score 508 bits
Score difference with first non-orthologous sequence - A.gossypii:508 C.lusitaniae:508

Q751G6              	100.00%		C4YAQ5              	100.00%
Bootstrap support for Q751G6 as seed ortholog is 100%.
Bootstrap support for C4YAQ5 as seed ortholog is 100%.

Group of orthologs #720. Best score 507 bits
Score difference with first non-orthologous sequence - A.gossypii:373 C.lusitaniae:507

O60027              	100.00%		C4YB62              	100.00%
Bootstrap support for O60027 as seed ortholog is 100%.
Bootstrap support for C4YB62 as seed ortholog is 100%.

Group of orthologs #721. Best score 506 bits
Score difference with first non-orthologous sequence - A.gossypii:506 C.lusitaniae:506

Q758W5              	100.00%		C4YAN9              	100.00%
Bootstrap support for Q758W5 as seed ortholog is 100%.
Bootstrap support for C4YAN9 as seed ortholog is 100%.

Group of orthologs #722. Best score 504 bits
Score difference with first non-orthologous sequence - A.gossypii:504 C.lusitaniae:504

Q752X9              	100.00%		C4XX12              	100.00%
Bootstrap support for Q752X9 as seed ortholog is 100%.
Bootstrap support for C4XX12 as seed ortholog is 100%.

Group of orthologs #723. Best score 504 bits
Score difference with first non-orthologous sequence - A.gossypii:504 C.lusitaniae:504

Q750D3              	100.00%		C4Y2C9              	100.00%
Bootstrap support for Q750D3 as seed ortholog is 100%.
Bootstrap support for C4Y2C9 as seed ortholog is 100%.

Group of orthologs #724. Best score 504 bits
Score difference with first non-orthologous sequence - A.gossypii:504 C.lusitaniae:504

Q756G8              	100.00%		C4Y4A5              	100.00%
Bootstrap support for Q756G8 as seed ortholog is 100%.
Bootstrap support for C4Y4A5 as seed ortholog is 100%.

Group of orthologs #725. Best score 504 bits
Score difference with first non-orthologous sequence - A.gossypii:504 C.lusitaniae:445

Q75CL2              	100.00%		C4Y3C5              	100.00%
Bootstrap support for Q75CL2 as seed ortholog is 100%.
Bootstrap support for C4Y3C5 as seed ortholog is 100%.

Group of orthologs #726. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 C.lusitaniae:503

Q74Z39              	100.00%		C4Y2B2              	100.00%
Bootstrap support for Q74Z39 as seed ortholog is 100%.
Bootstrap support for C4Y2B2 as seed ortholog is 100%.

Group of orthologs #727. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:411 C.lusitaniae:408

Q756S0              	100.00%		C4XY26              	100.00%
Bootstrap support for Q756S0 as seed ortholog is 100%.
Bootstrap support for C4XY26 as seed ortholog is 100%.

Group of orthologs #728. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 C.lusitaniae:503

Q75C96              	100.00%		C4XVZ3              	100.00%
Bootstrap support for Q75C96 as seed ortholog is 100%.
Bootstrap support for C4XVZ3 as seed ortholog is 100%.

Group of orthologs #729. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 C.lusitaniae:503

Q755V0              	100.00%		C4Y4H5              	100.00%
Bootstrap support for Q755V0 as seed ortholog is 100%.
Bootstrap support for C4Y4H5 as seed ortholog is 100%.

Group of orthologs #730. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 C.lusitaniae:503

Q74ZI0              	100.00%		C4YA65              	100.00%
Bootstrap support for Q74ZI0 as seed ortholog is 100%.
Bootstrap support for C4YA65 as seed ortholog is 100%.

Group of orthologs #731. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 C.lusitaniae:503

Q755N1              	100.00%		C4Y6E6              	100.00%
Bootstrap support for Q755N1 as seed ortholog is 100%.
Bootstrap support for C4Y6E6 as seed ortholog is 100%.

Group of orthologs #732. Best score 503 bits
Score difference with first non-orthologous sequence - A.gossypii:503 C.lusitaniae:503

Q75DM9              	100.00%		C4Y7C1              	100.00%
Bootstrap support for Q75DM9 as seed ortholog is 100%.
Bootstrap support for C4Y7C1 as seed ortholog is 100%.

Group of orthologs #733. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:347 C.lusitaniae:502

Q754S8              	100.00%		C4XXW1              	100.00%
Bootstrap support for Q754S8 as seed ortholog is 100%.
Bootstrap support for C4XXW1 as seed ortholog is 100%.

Group of orthologs #734. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:502 C.lusitaniae:502

Q750Z6              	100.00%		C4Y9H0              	100.00%
Bootstrap support for Q750Z6 as seed ortholog is 100%.
Bootstrap support for C4Y9H0 as seed ortholog is 100%.

Group of orthologs #735. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:502 C.lusitaniae:66

Q759G5              	100.00%		C4Y9S2              	100.00%
Bootstrap support for Q759G5 as seed ortholog is 100%.
Bootstrap support for C4Y9S2 as seed ortholog is 97%.

Group of orthologs #736. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:502 C.lusitaniae:502

Q757W0              	100.00%		C4YC90              	100.00%
Bootstrap support for Q757W0 as seed ortholog is 100%.
Bootstrap support for C4YC90 as seed ortholog is 100%.

Group of orthologs #737. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:62 C.lusitaniae:52

Q753V1              	100.00%		C4XWL5              	100.00%
Bootstrap support for Q753V1 as seed ortholog is 89%.
Bootstrap support for C4XWL5 as seed ortholog is 87%.

Group of orthologs #738. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:500 C.lusitaniae:500

Q75AX9              	100.00%		C4XWY8              	100.00%
Bootstrap support for Q75AX9 as seed ortholog is 100%.
Bootstrap support for C4XWY8 as seed ortholog is 100%.

Group of orthologs #739. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:500 C.lusitaniae:500

Q75A87              	100.00%		C4XY85              	100.00%
Bootstrap support for Q75A87 as seed ortholog is 100%.
Bootstrap support for C4XY85 as seed ortholog is 100%.

Group of orthologs #740. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:500 C.lusitaniae:500

Q756W2              	100.00%		C4Y8G1              	100.00%
Bootstrap support for Q756W2 as seed ortholog is 100%.
Bootstrap support for C4Y8G1 as seed ortholog is 100%.

Group of orthologs #741. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:500 C.lusitaniae:500

Q75DR1              	100.00%		C4Y3L4              	100.00%
Bootstrap support for Q75DR1 as seed ortholog is 100%.
Bootstrap support for C4Y3L4 as seed ortholog is 100%.

Group of orthologs #742. Best score 500 bits
Score difference with first non-orthologous sequence - A.gossypii:500 C.lusitaniae:500

Q75B66              	100.00%		C4Y6S8              	100.00%
Bootstrap support for Q75B66 as seed ortholog is 100%.
Bootstrap support for C4Y6S8 as seed ortholog is 100%.

Group of orthologs #743. Best score 499 bits
Score difference with first non-orthologous sequence - A.gossypii:499 C.lusitaniae:499

Q753F2              	100.00%		C4Y0C1              	100.00%
Bootstrap support for Q753F2 as seed ortholog is 100%.
Bootstrap support for C4Y0C1 as seed ortholog is 100%.

Group of orthologs #744. Best score 499 bits
Score difference with first non-orthologous sequence - A.gossypii:499 C.lusitaniae:499

Q74ZW3              	100.00%		C4Y3N9              	100.00%
Bootstrap support for Q74ZW3 as seed ortholog is 100%.
Bootstrap support for C4Y3N9 as seed ortholog is 100%.

Group of orthologs #745. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:224 C.lusitaniae:206

Q753W1              	100.00%		C4XZV4              	100.00%
Bootstrap support for Q753W1 as seed ortholog is 100%.
Bootstrap support for C4XZV4 as seed ortholog is 100%.

Group of orthologs #746. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:361 C.lusitaniae:344

Q753G9              	100.00%		C4Y2L9              	100.00%
Bootstrap support for Q753G9 as seed ortholog is 100%.
Bootstrap support for C4Y2L9 as seed ortholog is 100%.

Group of orthologs #747. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:344 C.lusitaniae:354

Q756L6              	100.00%		C4Y7B2              	100.00%
Bootstrap support for Q756L6 as seed ortholog is 100%.
Bootstrap support for C4Y7B2 as seed ortholog is 100%.

Group of orthologs #748. Best score 498 bits
Score difference with first non-orthologous sequence - A.gossypii:498 C.lusitaniae:498

Q75BM2              	100.00%		C4Y4N3              	100.00%
Bootstrap support for Q75BM2 as seed ortholog is 100%.
Bootstrap support for C4Y4N3 as seed ortholog is 100%.

Group of orthologs #749. Best score 497 bits
Score difference with first non-orthologous sequence - A.gossypii:497 C.lusitaniae:497

Q75DZ7              	100.00%		C4XW92              	100.00%
Bootstrap support for Q75DZ7 as seed ortholog is 100%.
Bootstrap support for C4XW92 as seed ortholog is 100%.

Group of orthologs #750. Best score 496 bits
Score difference with first non-orthologous sequence - A.gossypii:496 C.lusitaniae:496

Q75CE0              	100.00%		C4Y3M4              	100.00%
Bootstrap support for Q75CE0 as seed ortholog is 100%.
Bootstrap support for C4Y3M4 as seed ortholog is 100%.

Group of orthologs #751. Best score 496 bits
Score difference with first non-orthologous sequence - A.gossypii:496 C.lusitaniae:496

Q758K7              	100.00%		C4YBJ2              	100.00%
Bootstrap support for Q758K7 as seed ortholog is 100%.
Bootstrap support for C4YBJ2 as seed ortholog is 100%.

Group of orthologs #752. Best score 495 bits
Score difference with first non-orthologous sequence - A.gossypii:207 C.lusitaniae:145

Q757W1              	100.00%		C4XWK0              	100.00%
Bootstrap support for Q757W1 as seed ortholog is 99%.
Bootstrap support for C4XWK0 as seed ortholog is 99%.

Group of orthologs #753. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 C.lusitaniae:493

Q750W2              	100.00%		C4XW12              	100.00%
Bootstrap support for Q750W2 as seed ortholog is 100%.
Bootstrap support for C4XW12 as seed ortholog is 100%.

Group of orthologs #754. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 C.lusitaniae:493

Q754U8              	100.00%		C4XZB1              	100.00%
Bootstrap support for Q754U8 as seed ortholog is 100%.
Bootstrap support for C4XZB1 as seed ortholog is 100%.

Group of orthologs #755. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 C.lusitaniae:493

Q753G6              	100.00%		C4Y3K9              	100.00%
Bootstrap support for Q753G6 as seed ortholog is 100%.
Bootstrap support for C4Y3K9 as seed ortholog is 100%.

Group of orthologs #756. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 C.lusitaniae:493

Q757Y2              	100.00%		C4Y4N9              	100.00%
Bootstrap support for Q757Y2 as seed ortholog is 100%.
Bootstrap support for C4Y4N9 as seed ortholog is 100%.

Group of orthologs #757. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 C.lusitaniae:493

Q75B77              	100.00%		C4Y856              	100.00%
Bootstrap support for Q75B77 as seed ortholog is 100%.
Bootstrap support for C4Y856 as seed ortholog is 100%.

Group of orthologs #758. Best score 493 bits
Score difference with first non-orthologous sequence - A.gossypii:493 C.lusitaniae:493

Q75EG5              	100.00%		C4Y7F6              	100.00%
Bootstrap support for Q75EG5 as seed ortholog is 100%.
Bootstrap support for C4Y7F6 as seed ortholog is 100%.

Group of orthologs #759. Best score 491 bits
Score difference with first non-orthologous sequence - A.gossypii:491 C.lusitaniae:491

Q75E49              	100.00%		C4Y357              	100.00%
Bootstrap support for Q75E49 as seed ortholog is 100%.
Bootstrap support for C4Y357 as seed ortholog is 100%.

Group of orthologs #760. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:490 C.lusitaniae:490

Q755U7              	100.00%		C4Y2P5              	100.00%
Bootstrap support for Q755U7 as seed ortholog is 100%.
Bootstrap support for C4Y2P5 as seed ortholog is 100%.

Group of orthologs #761. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:490 C.lusitaniae:490

Q75C90              	100.00%		C4Y4Y3              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for C4Y4Y3 as seed ortholog is 100%.

Group of orthologs #762. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:490 C.lusitaniae:490

Q75EK2              	100.00%		C4Y892              	100.00%
Bootstrap support for Q75EK2 as seed ortholog is 100%.
Bootstrap support for C4Y892 as seed ortholog is 100%.

Group of orthologs #763. Best score 489 bits
Score difference with first non-orthologous sequence - A.gossypii:489 C.lusitaniae:489

Q750E0              	100.00%		C4Y105              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for C4Y105 as seed ortholog is 100%.

Group of orthologs #764. Best score 489 bits
Score difference with first non-orthologous sequence - A.gossypii:388 C.lusitaniae:364

Q75CM3              	100.00%		C4XVQ9              	100.00%
Bootstrap support for Q75CM3 as seed ortholog is 100%.
Bootstrap support for C4XVQ9 as seed ortholog is 100%.

Group of orthologs #765. Best score 489 bits
Score difference with first non-orthologous sequence - A.gossypii:489 C.lusitaniae:489

Q751D8              	100.00%		C4Y5M0              	100.00%
Bootstrap support for Q751D8 as seed ortholog is 100%.
Bootstrap support for C4Y5M0 as seed ortholog is 100%.

Group of orthologs #766. Best score 489 bits
Score difference with first non-orthologous sequence - A.gossypii:489 C.lusitaniae:489

Q754W1              	100.00%		C4Y530              	100.00%
Bootstrap support for Q754W1 as seed ortholog is 100%.
Bootstrap support for C4Y530 as seed ortholog is 100%.

Group of orthologs #767. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:488 C.lusitaniae:488

Q750M3              	100.00%		C4XWT5              	100.00%
Bootstrap support for Q750M3 as seed ortholog is 100%.
Bootstrap support for C4XWT5 as seed ortholog is 100%.

Group of orthologs #768. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:182 C.lusitaniae:162

Q755B6              	100.00%		C4Y6M5              	100.00%
Bootstrap support for Q755B6 as seed ortholog is 100%.
Bootstrap support for C4Y6M5 as seed ortholog is 99%.

Group of orthologs #769. Best score 488 bits
Score difference with first non-orthologous sequence - A.gossypii:488 C.lusitaniae:488

Q751R5              	100.00%		C4YA92              	100.00%
Bootstrap support for Q751R5 as seed ortholog is 100%.
Bootstrap support for C4YA92 as seed ortholog is 100%.

Group of orthologs #770. Best score 487 bits
Score difference with first non-orthologous sequence - A.gossypii:487 C.lusitaniae:487

Q752I6              	100.00%		C4Y050              	100.00%
                    	       		C4Y210              	8.56%
Bootstrap support for Q752I6 as seed ortholog is 100%.
Bootstrap support for C4Y050 as seed ortholog is 100%.

Group of orthologs #771. Best score 487 bits
Score difference with first non-orthologous sequence - A.gossypii:487 C.lusitaniae:487

Q757W9              	100.00%		C4XVR8              	100.00%
Bootstrap support for Q757W9 as seed ortholog is 100%.
Bootstrap support for C4XVR8 as seed ortholog is 100%.

Group of orthologs #772. Best score 487 bits
Score difference with first non-orthologous sequence - A.gossypii:487 C.lusitaniae:487

Q759E4              	100.00%		C4Y0W6              	100.00%
Bootstrap support for Q759E4 as seed ortholog is 100%.
Bootstrap support for C4Y0W6 as seed ortholog is 100%.

Group of orthologs #773. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:486 C.lusitaniae:486

Q755W8              	100.00%		C4Y119              	100.00%
Bootstrap support for Q755W8 as seed ortholog is 100%.
Bootstrap support for C4Y119 as seed ortholog is 100%.

Group of orthologs #774. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:486 C.lusitaniae:486

Q75CM8              	100.00%		C4Y6J5              	100.00%
Bootstrap support for Q75CM8 as seed ortholog is 100%.
Bootstrap support for C4Y6J5 as seed ortholog is 100%.

Group of orthologs #775. Best score 486 bits
Score difference with first non-orthologous sequence - A.gossypii:486 C.lusitaniae:486

Q75CC4              	100.00%		C4Y8U5              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for C4Y8U5 as seed ortholog is 100%.

Group of orthologs #776. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 C.lusitaniae:485

Q755S2              	100.00%		C4XX83              	100.00%
Bootstrap support for Q755S2 as seed ortholog is 100%.
Bootstrap support for C4XX83 as seed ortholog is 100%.

Group of orthologs #777. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 C.lusitaniae:354

Q756N6              	100.00%		C4XY63              	100.00%
Bootstrap support for Q756N6 as seed ortholog is 100%.
Bootstrap support for C4XY63 as seed ortholog is 100%.

Group of orthologs #778. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 C.lusitaniae:485

Q756J7              	100.00%		C4Y148              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for C4Y148 as seed ortholog is 100%.

Group of orthologs #779. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 C.lusitaniae:485

Q759S6              	100.00%		C4XZC8              	100.00%
Bootstrap support for Q759S6 as seed ortholog is 100%.
Bootstrap support for C4XZC8 as seed ortholog is 100%.

Group of orthologs #780. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 C.lusitaniae:485

Q75FB4              	100.00%		C4XXK0              	100.00%
Bootstrap support for Q75FB4 as seed ortholog is 100%.
Bootstrap support for C4XXK0 as seed ortholog is 100%.

Group of orthologs #781. Best score 485 bits
Score difference with first non-orthologous sequence - A.gossypii:485 C.lusitaniae:485

Q75C13              	100.00%		C4Y475              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for C4Y475 as seed ortholog is 100%.

Group of orthologs #782. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:484 C.lusitaniae:484

Q75BZ4              	100.00%		C4XYQ5              	100.00%
Bootstrap support for Q75BZ4 as seed ortholog is 100%.
Bootstrap support for C4XYQ5 as seed ortholog is 100%.

Group of orthologs #783. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:484 C.lusitaniae:423

Q74ZK9              	100.00%		C4YBB1              	100.00%
Bootstrap support for Q74ZK9 as seed ortholog is 100%.
Bootstrap support for C4YBB1 as seed ortholog is 100%.

Group of orthologs #784. Best score 484 bits
Score difference with first non-orthologous sequence - A.gossypii:484 C.lusitaniae:484

Q754L4              	100.00%		C4Y8I9              	100.00%
Bootstrap support for Q754L4 as seed ortholog is 100%.
Bootstrap support for C4Y8I9 as seed ortholog is 100%.

Group of orthologs #785. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:57 C.lusitaniae:133

Q754W4              	100.00%		C4XX57              	100.00%
Bootstrap support for Q754W4 as seed ortholog is 95%.
Bootstrap support for C4XX57 as seed ortholog is 99%.

Group of orthologs #786. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 C.lusitaniae:483

Q754S9              	100.00%		C4XXW5              	100.00%
Bootstrap support for Q754S9 as seed ortholog is 100%.
Bootstrap support for C4XXW5 as seed ortholog is 100%.

Group of orthologs #787. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 C.lusitaniae:429

Q754S1              	100.00%		C4XYL9              	100.00%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for C4XYL9 as seed ortholog is 100%.

Group of orthologs #788. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 C.lusitaniae:483

Q750P3              	100.00%		C4Y7Q1              	100.00%
Bootstrap support for Q750P3 as seed ortholog is 100%.
Bootstrap support for C4Y7Q1 as seed ortholog is 100%.

Group of orthologs #789. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 C.lusitaniae:483

Q75C53              	100.00%		C4Y5C5              	100.00%
Bootstrap support for Q75C53 as seed ortholog is 100%.
Bootstrap support for C4Y5C5 as seed ortholog is 100%.

Group of orthologs #790. Best score 483 bits
Score difference with first non-orthologous sequence - A.gossypii:483 C.lusitaniae:483

Q75D93              	100.00%		C4Y659              	100.00%
Bootstrap support for Q75D93 as seed ortholog is 100%.
Bootstrap support for C4Y659 as seed ortholog is 100%.

Group of orthologs #791. Best score 482 bits
Score difference with first non-orthologous sequence - A.gossypii:482 C.lusitaniae:482

Q750R4              	100.00%		C4Y390              	100.00%
Bootstrap support for Q750R4 as seed ortholog is 100%.
Bootstrap support for C4Y390 as seed ortholog is 100%.

Group of orthologs #792. Best score 481 bits
Score difference with first non-orthologous sequence - A.gossypii:481 C.lusitaniae:481

Q75CE5              	100.00%		C4Y4X5              	100.00%
Bootstrap support for Q75CE5 as seed ortholog is 100%.
Bootstrap support for C4Y4X5 as seed ortholog is 100%.

Group of orthologs #793. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 C.lusitaniae:480

Q759L6              	100.00%		C4XWF0              	100.00%
Bootstrap support for Q759L6 as seed ortholog is 100%.
Bootstrap support for C4XWF0 as seed ortholog is 100%.

Group of orthologs #794. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 C.lusitaniae:480

Q75EW1              	100.00%		C4XXZ1              	100.00%
Bootstrap support for Q75EW1 as seed ortholog is 100%.
Bootstrap support for C4XXZ1 as seed ortholog is 100%.

Group of orthologs #795. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 C.lusitaniae:210

Q756C8              	100.00%		C4Y6D6              	100.00%
Bootstrap support for Q756C8 as seed ortholog is 100%.
Bootstrap support for C4Y6D6 as seed ortholog is 100%.

Group of orthologs #796. Best score 480 bits
Score difference with first non-orthologous sequence - A.gossypii:480 C.lusitaniae:370

Q75DQ1              	100.00%		C4Y6V8              	100.00%
Bootstrap support for Q75DQ1 as seed ortholog is 100%.
Bootstrap support for C4Y6V8 as seed ortholog is 100%.

Group of orthologs #797. Best score 479 bits
Score difference with first non-orthologous sequence - A.gossypii:350 C.lusitaniae:377

Q759R9              	100.00%		C4XY91              	100.00%
Bootstrap support for Q759R9 as seed ortholog is 100%.
Bootstrap support for C4XY91 as seed ortholog is 100%.

Group of orthologs #798. Best score 479 bits
Score difference with first non-orthologous sequence - A.gossypii:4 C.lusitaniae:231

Q755L5              	100.00%		C4Y3S9              	100.00%
Bootstrap support for Q755L5 as seed ortholog is 45%.
Alternative seed ortholog is Q758W1 (4 bits away from this cluster)
Bootstrap support for C4Y3S9 as seed ortholog is 100%.

Group of orthologs #799. Best score 479 bits
Score difference with first non-orthologous sequence - A.gossypii:479 C.lusitaniae:479

Q75AA0              	100.00%		C4Y2K2              	100.00%
Bootstrap support for Q75AA0 as seed ortholog is 100%.
Bootstrap support for C4Y2K2 as seed ortholog is 100%.

Group of orthologs #800. Best score 479 bits
Score difference with first non-orthologous sequence - A.gossypii:479 C.lusitaniae:479

Q753P7              	100.00%		C4Y8S4              	100.00%
Bootstrap support for Q753P7 as seed ortholog is 100%.
Bootstrap support for C4Y8S4 as seed ortholog is 100%.

Group of orthologs #801. Best score 478 bits
Score difference with first non-orthologous sequence - A.gossypii:478 C.lusitaniae:478

Q75DC8              	100.00%		C4YBJ9              	100.00%
Bootstrap support for Q75DC8 as seed ortholog is 100%.
Bootstrap support for C4YBJ9 as seed ortholog is 100%.

Group of orthologs #802. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:477 C.lusitaniae:477

Q753V0              	100.00%		C4XWK7              	100.00%
Bootstrap support for Q753V0 as seed ortholog is 100%.
Bootstrap support for C4XWK7 as seed ortholog is 100%.

Group of orthologs #803. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:477 C.lusitaniae:477

Q753L0              	100.00%		C4Y9J2              	100.00%
Bootstrap support for Q753L0 as seed ortholog is 100%.
Bootstrap support for C4Y9J2 as seed ortholog is 100%.

Group of orthologs #804. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:477 C.lusitaniae:477

Q75EB1              	100.00%		C4Y4H7              	100.00%
Bootstrap support for Q75EB1 as seed ortholog is 100%.
Bootstrap support for C4Y4H7 as seed ortholog is 100%.

Group of orthologs #805. Best score 476 bits
Score difference with first non-orthologous sequence - A.gossypii:476 C.lusitaniae:476

Q757A8              	100.00%		C4Y8C8              	100.00%
Bootstrap support for Q757A8 as seed ortholog is 100%.
Bootstrap support for C4Y8C8 as seed ortholog is 100%.

Group of orthologs #806. Best score 476 bits
Score difference with first non-orthologous sequence - A.gossypii:476 C.lusitaniae:476

Q75CU7              	100.00%		C4Y7U5              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for C4Y7U5 as seed ortholog is 100%.

Group of orthologs #807. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:20 C.lusitaniae:161

Q751H3              	100.00%		C4Y1D1              	100.00%
Bootstrap support for Q751H3 as seed ortholog is 73%.
Alternative seed ortholog is D8FGB8 (20 bits away from this cluster)
Bootstrap support for C4Y1D1 as seed ortholog is 99%.

Group of orthologs #808. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 C.lusitaniae:475

Q756E7              	100.00%		C4Y153              	100.00%
Bootstrap support for Q756E7 as seed ortholog is 100%.
Bootstrap support for C4Y153 as seed ortholog is 100%.

Group of orthologs #809. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 C.lusitaniae:233

Q75E16              	100.00%		C4XW60              	100.00%
Bootstrap support for Q75E16 as seed ortholog is 100%.
Bootstrap support for C4XW60 as seed ortholog is 100%.

Group of orthologs #810. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 C.lusitaniae:475

Q754I4              	100.00%		C4Y7X2              	100.00%
Bootstrap support for Q754I4 as seed ortholog is 100%.
Bootstrap support for C4Y7X2 as seed ortholog is 100%.

Group of orthologs #811. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:82 C.lusitaniae:114

Q755Z5              	100.00%		C4Y6Z7              	100.00%
Bootstrap support for Q755Z5 as seed ortholog is 98%.
Bootstrap support for C4Y6Z7 as seed ortholog is 97%.

Group of orthologs #812. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 C.lusitaniae:475

Q74ZP9              	100.00%		C4YC81              	100.00%
Bootstrap support for Q74ZP9 as seed ortholog is 100%.
Bootstrap support for C4YC81 as seed ortholog is 100%.

Group of orthologs #813. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:293 C.lusitaniae:475

Q75EJ6              	100.00%		C4Y1C5              	100.00%
Bootstrap support for Q75EJ6 as seed ortholog is 100%.
Bootstrap support for C4Y1C5 as seed ortholog is 100%.

Group of orthologs #814. Best score 475 bits
Score difference with first non-orthologous sequence - A.gossypii:475 C.lusitaniae:475

Q75D49              	100.00%		C4Y9T2              	100.00%
Bootstrap support for Q75D49 as seed ortholog is 100%.
Bootstrap support for C4Y9T2 as seed ortholog is 100%.

Group of orthologs #815. Best score 474 bits
Score difference with first non-orthologous sequence - A.gossypii:474 C.lusitaniae:313

Q754X6              	100.00%		C4XVN2              	100.00%
Bootstrap support for Q754X6 as seed ortholog is 100%.
Bootstrap support for C4XVN2 as seed ortholog is 100%.

Group of orthologs #816. Best score 474 bits
Score difference with first non-orthologous sequence - A.gossypii:92 C.lusitaniae:283

Q752M6              	100.00%		C4XXW0              	100.00%
Bootstrap support for Q752M6 as seed ortholog is 97%.
Bootstrap support for C4XXW0 as seed ortholog is 100%.

Group of orthologs #817. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 C.lusitaniae:107

Q75BG3              	100.00%		C4XW83              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for C4XW83 as seed ortholog is 100%.

Group of orthologs #818. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 C.lusitaniae:473

Q750P5              	100.00%		C4Y6W4              	100.00%
Bootstrap support for Q750P5 as seed ortholog is 100%.
Bootstrap support for C4Y6W4 as seed ortholog is 100%.

Group of orthologs #819. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 C.lusitaniae:473

Q75A48              	100.00%		C4Y170              	100.00%
Bootstrap support for Q75A48 as seed ortholog is 100%.
Bootstrap support for C4Y170 as seed ortholog is 100%.

Group of orthologs #820. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 C.lusitaniae:473

Q754D5              	100.00%		C4Y620              	100.00%
Bootstrap support for Q754D5 as seed ortholog is 100%.
Bootstrap support for C4Y620 as seed ortholog is 100%.

Group of orthologs #821. Best score 473 bits
Score difference with first non-orthologous sequence - A.gossypii:473 C.lusitaniae:473

Q759S7              	100.00%		Q875K1              	100.00%
Bootstrap support for Q759S7 as seed ortholog is 100%.
Bootstrap support for Q875K1 as seed ortholog is 100%.

Group of orthologs #822. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q750J7              	100.00%		C4XWQ9              	100.00%
Bootstrap support for Q750J7 as seed ortholog is 100%.
Bootstrap support for C4XWQ9 as seed ortholog is 100%.

Group of orthologs #823. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q751E7              	100.00%		C4XZN2              	100.00%
Bootstrap support for Q751E7 as seed ortholog is 100%.
Bootstrap support for C4XZN2 as seed ortholog is 100%.

Group of orthologs #824. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q759Q4              	100.00%		C4XY75              	100.00%
Bootstrap support for Q759Q4 as seed ortholog is 100%.
Bootstrap support for C4XY75 as seed ortholog is 100%.

Group of orthologs #825. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q75CG9              	100.00%		C4XVP1              	100.00%
Bootstrap support for Q75CG9 as seed ortholog is 100%.
Bootstrap support for C4XVP1 as seed ortholog is 100%.

Group of orthologs #826. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q75A66              	100.00%		C4XYF9              	100.00%
Bootstrap support for Q75A66 as seed ortholog is 100%.
Bootstrap support for C4XYF9 as seed ortholog is 100%.

Group of orthologs #827. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q75A00              	100.00%		C4Y4F6              	100.00%
Bootstrap support for Q75A00 as seed ortholog is 100%.
Bootstrap support for C4Y4F6 as seed ortholog is 100%.

Group of orthologs #828. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q75AU0              	100.00%		C4Y8R7              	100.00%
Bootstrap support for Q75AU0 as seed ortholog is 100%.
Bootstrap support for C4Y8R7 as seed ortholog is 100%.

Group of orthologs #829. Best score 472 bits
Score difference with first non-orthologous sequence - A.gossypii:472 C.lusitaniae:472

Q75ET1              	100.00%		C4YB70              	100.00%
Bootstrap support for Q75ET1 as seed ortholog is 100%.
Bootstrap support for C4YB70 as seed ortholog is 100%.

Group of orthologs #830. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:471 C.lusitaniae:471

Q759R5              	100.00%		C4Y2M0              	100.00%
Bootstrap support for Q759R5 as seed ortholog is 100%.
Bootstrap support for C4Y2M0 as seed ortholog is 100%.

Group of orthologs #831. Best score 471 bits
Score difference with first non-orthologous sequence - A.gossypii:471 C.lusitaniae:471

Q752S8              	100.00%		C4YAW0              	100.00%
Bootstrap support for Q752S8 as seed ortholog is 100%.
Bootstrap support for C4YAW0 as seed ortholog is 100%.

Group of orthologs #832. Best score 470 bits
Score difference with first non-orthologous sequence - A.gossypii:470 C.lusitaniae:470

Q753D4              	100.00%		C4XZF0              	100.00%
Bootstrap support for Q753D4 as seed ortholog is 100%.
Bootstrap support for C4XZF0 as seed ortholog is 100%.

Group of orthologs #833. Best score 470 bits
Score difference with first non-orthologous sequence - A.gossypii:470 C.lusitaniae:263

Q75DY9              	100.00%		C4XWZ4              	100.00%
Bootstrap support for Q75DY9 as seed ortholog is 100%.
Bootstrap support for C4XWZ4 as seed ortholog is 100%.

Group of orthologs #834. Best score 470 bits
Score difference with first non-orthologous sequence - A.gossypii:470 C.lusitaniae:470

Q753M2              	100.00%		C4Y747              	100.00%
Bootstrap support for Q753M2 as seed ortholog is 100%.
Bootstrap support for C4Y747 as seed ortholog is 100%.

Group of orthologs #835. Best score 470 bits
Score difference with first non-orthologous sequence - A.gossypii:396 C.lusitaniae:470

Q753C0              	100.00%		C4Y8J5              	100.00%
Bootstrap support for Q753C0 as seed ortholog is 100%.
Bootstrap support for C4Y8J5 as seed ortholog is 100%.

Group of orthologs #836. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:469 C.lusitaniae:469

Q75BE8              	100.00%		C4XWX3              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for C4XWX3 as seed ortholog is 100%.

Group of orthologs #837. Best score 469 bits
Score difference with first non-orthologous sequence - A.gossypii:469 C.lusitaniae:469

Q750R9              	100.00%		C4Y5Z9              	100.00%
Bootstrap support for Q750R9 as seed ortholog is 100%.
Bootstrap support for C4Y5Z9 as seed ortholog is 100%.

Group of orthologs #838. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 C.lusitaniae:468

Q74ZF8              	100.00%		C4Y7F2              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for C4Y7F2 as seed ortholog is 100%.

Group of orthologs #839. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 C.lusitaniae:335

Q75EE9              	100.00%		C4XYL5              	100.00%
Bootstrap support for Q75EE9 as seed ortholog is 100%.
Bootstrap support for C4XYL5 as seed ortholog is 100%.

Group of orthologs #840. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 C.lusitaniae:468

Q75CN6              	100.00%		C4Y276              	100.00%
Bootstrap support for Q75CN6 as seed ortholog is 100%.
Bootstrap support for C4Y276 as seed ortholog is 100%.

Group of orthologs #841. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 C.lusitaniae:468

Q750E9              	100.00%		C4YBV1              	100.00%
Bootstrap support for Q750E9 as seed ortholog is 100%.
Bootstrap support for C4YBV1 as seed ortholog is 100%.

Group of orthologs #842. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:190 C.lusitaniae:278

Q75EC8              	100.00%		C4Y8D3              	100.00%
Bootstrap support for Q75EC8 as seed ortholog is 100%.
Bootstrap support for C4Y8D3 as seed ortholog is 100%.

Group of orthologs #843. Best score 468 bits
Score difference with first non-orthologous sequence - A.gossypii:468 C.lusitaniae:468

Q75CE1              	100.00%		C4YCC1              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for C4YCC1 as seed ortholog is 100%.

Group of orthologs #844. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 C.lusitaniae:467

Q750G0              	100.00%		C4XWW7              	100.00%
Bootstrap support for Q750G0 as seed ortholog is 100%.
Bootstrap support for C4XWW7 as seed ortholog is 100%.

Group of orthologs #845. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:467 C.lusitaniae:467

Q74ZX1              	100.00%		C4XXQ2              	100.00%
Bootstrap support for Q74ZX1 as seed ortholog is 100%.
Bootstrap support for C4XXQ2 as seed ortholog is 100%.

Group of orthologs #846. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:402 C.lusitaniae:467

Q756N5              	100.00%		C4XWW1              	100.00%
Bootstrap support for Q756N5 as seed ortholog is 100%.
Bootstrap support for C4XWW1 as seed ortholog is 100%.

Group of orthologs #847. Best score 467 bits
Score difference with first non-orthologous sequence - A.gossypii:180 C.lusitaniae:250

Q75AD8              	100.00%		C4Y1R0              	100.00%
Bootstrap support for Q75AD8 as seed ortholog is 99%.
Bootstrap support for C4Y1R0 as seed ortholog is 100%.

Group of orthologs #848. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:466 C.lusitaniae:225

Q75AB2              	100.00%		C4XYM7              	100.00%
Bootstrap support for Q75AB2 as seed ortholog is 100%.
Bootstrap support for C4XYM7 as seed ortholog is 99%.

Group of orthologs #849. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:466 C.lusitaniae:466

Q752Z5              	100.00%		C4Y4D9              	100.00%
Bootstrap support for Q752Z5 as seed ortholog is 100%.
Bootstrap support for C4Y4D9 as seed ortholog is 100%.

Group of orthologs #850. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:466 C.lusitaniae:466

Q751B6              	100.00%		C4Y6W7              	100.00%
Bootstrap support for Q751B6 as seed ortholog is 100%.
Bootstrap support for C4Y6W7 as seed ortholog is 100%.

Group of orthologs #851. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:466 C.lusitaniae:466

Q754Q1              	100.00%		C4Y8E6              	100.00%
Bootstrap support for Q754Q1 as seed ortholog is 100%.
Bootstrap support for C4Y8E6 as seed ortholog is 100%.

Group of orthologs #852. Best score 466 bits
Score difference with first non-orthologous sequence - A.gossypii:288 C.lusitaniae:266

Q75A61              	100.00%		C4YB49              	100.00%
Bootstrap support for Q75A61 as seed ortholog is 100%.
Bootstrap support for C4YB49 as seed ortholog is 100%.

Group of orthologs #853. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:279 C.lusitaniae:465

Q754F9              	100.00%		C4XZL6              	100.00%
Bootstrap support for Q754F9 as seed ortholog is 100%.
Bootstrap support for C4XZL6 as seed ortholog is 100%.

Group of orthologs #854. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 C.lusitaniae:465

Q74ZP6              	100.00%		C4Y444              	100.00%
Bootstrap support for Q74ZP6 as seed ortholog is 100%.
Bootstrap support for C4Y444 as seed ortholog is 100%.

Group of orthologs #855. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 C.lusitaniae:465

Q74ZC7              	100.00%		C4Y8U0              	100.00%
Bootstrap support for Q74ZC7 as seed ortholog is 100%.
Bootstrap support for C4Y8U0 as seed ortholog is 100%.

Group of orthologs #856. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 C.lusitaniae:465

Q75DM8              	100.00%		C4Y2B8              	100.00%
Bootstrap support for Q75DM8 as seed ortholog is 100%.
Bootstrap support for C4Y2B8 as seed ortholog is 100%.

Group of orthologs #857. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:283 C.lusitaniae:465

Q754D3              	100.00%		C4YCF6              	100.00%
Bootstrap support for Q754D3 as seed ortholog is 100%.
Bootstrap support for C4YCF6 as seed ortholog is 100%.

Group of orthologs #858. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:122 C.lusitaniae:269

Q757T3              	100.00%		C4YBC3              	100.00%
Bootstrap support for Q757T3 as seed ortholog is 98%.
Bootstrap support for C4YBC3 as seed ortholog is 99%.

Group of orthologs #859. Best score 464 bits
Score difference with first non-orthologous sequence - A.gossypii:464 C.lusitaniae:464

Q751Z8              	100.00%		C4XYZ2              	100.00%
Bootstrap support for Q751Z8 as seed ortholog is 100%.
Bootstrap support for C4XYZ2 as seed ortholog is 100%.

Group of orthologs #860. Best score 464 bits
Score difference with first non-orthologous sequence - A.gossypii:464 C.lusitaniae:464

Q759I9              	100.00%		C4XXQ0              	100.00%
Bootstrap support for Q759I9 as seed ortholog is 100%.
Bootstrap support for C4XXQ0 as seed ortholog is 100%.

Group of orthologs #861. Best score 463 bits
Score difference with first non-orthologous sequence - A.gossypii:463 C.lusitaniae:463

Q751I9              	100.00%		C4Y1F8              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for C4Y1F8 as seed ortholog is 100%.

Group of orthologs #862. Best score 463 bits
Score difference with first non-orthologous sequence - A.gossypii:463 C.lusitaniae:191

Q75C86              	100.00%		C4XZ72              	100.00%
Bootstrap support for Q75C86 as seed ortholog is 100%.
Bootstrap support for C4XZ72 as seed ortholog is 100%.

Group of orthologs #863. Best score 463 bits
Score difference with first non-orthologous sequence - A.gossypii:463 C.lusitaniae:463

Q74ZA5              	100.00%		C4YBF9              	100.00%
Bootstrap support for Q74ZA5 as seed ortholog is 100%.
Bootstrap support for C4YBF9 as seed ortholog is 100%.

Group of orthologs #864. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:403 C.lusitaniae:462

Q752A4              	100.00%		C4XZ84              	100.00%
Bootstrap support for Q752A4 as seed ortholog is 100%.
Bootstrap support for C4XZ84 as seed ortholog is 100%.

Group of orthologs #865. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:462 C.lusitaniae:462

Q757B5              	100.00%		C4XZC9              	100.00%
Bootstrap support for Q757B5 as seed ortholog is 100%.
Bootstrap support for C4XZC9 as seed ortholog is 100%.

Group of orthologs #866. Best score 462 bits
Score difference with first non-orthologous sequence - A.gossypii:462 C.lusitaniae:462

Q754Q9              	100.00%		C4YBR6              	100.00%
Bootstrap support for Q754Q9 as seed ortholog is 100%.
Bootstrap support for C4YBR6 as seed ortholog is 100%.

Group of orthologs #867. Best score 461 bits
Score difference with first non-orthologous sequence - A.gossypii:461 C.lusitaniae:461

Q75AF0              	100.00%		C4XZW7              	100.00%
Bootstrap support for Q75AF0 as seed ortholog is 100%.
Bootstrap support for C4XZW7 as seed ortholog is 100%.

Group of orthologs #868. Best score 461 bits
Score difference with first non-orthologous sequence - A.gossypii:461 C.lusitaniae:461

Q754L0              	100.00%		C4Y6Z4              	100.00%
Bootstrap support for Q754L0 as seed ortholog is 100%.
Bootstrap support for C4Y6Z4 as seed ortholog is 100%.

Group of orthologs #869. Best score 461 bits
Score difference with first non-orthologous sequence - A.gossypii:325 C.lusitaniae:461

Q751F5              	100.00%		C4YAI1              	100.00%
Bootstrap support for Q751F5 as seed ortholog is 100%.
Bootstrap support for C4YAI1 as seed ortholog is 100%.

Group of orthologs #870. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:345 C.lusitaniae:460

Q756T8              	100.00%		C4Y8F7              	100.00%
Bootstrap support for Q756T8 as seed ortholog is 100%.
Bootstrap support for C4Y8F7 as seed ortholog is 100%.

Group of orthologs #871. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:460 C.lusitaniae:460

Q759J7              	100.00%		C4Y6S4              	100.00%
Bootstrap support for Q759J7 as seed ortholog is 100%.
Bootstrap support for C4Y6S4 as seed ortholog is 100%.

Group of orthologs #872. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:460 C.lusitaniae:460

Q752M1              	100.00%		C4YBZ5              	100.00%
Bootstrap support for Q752M1 as seed ortholog is 100%.
Bootstrap support for C4YBZ5 as seed ortholog is 100%.

Group of orthologs #873. Best score 460 bits
Score difference with first non-orthologous sequence - A.gossypii:460 C.lusitaniae:301

Q75BH8              	100.00%		C4YC97              	100.00%
Bootstrap support for Q75BH8 as seed ortholog is 100%.
Bootstrap support for C4YC97 as seed ortholog is 100%.

Group of orthologs #874. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:459

Q757J8              	100.00%		C4XX39              	100.00%
Bootstrap support for Q757J8 as seed ortholog is 100%.
Bootstrap support for C4XX39 as seed ortholog is 100%.

Group of orthologs #875. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:459

Q756V1              	100.00%		C4XYD0              	100.00%
Bootstrap support for Q756V1 as seed ortholog is 100%.
Bootstrap support for C4XYD0 as seed ortholog is 100%.

Group of orthologs #876. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:459

Q752N9              	100.00%		C4Y1N2              	100.00%
Bootstrap support for Q752N9 as seed ortholog is 100%.
Bootstrap support for C4Y1N2 as seed ortholog is 100%.

Group of orthologs #877. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:459

Q758S8              	100.00%		C4Y076              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 100%.
Bootstrap support for C4Y076 as seed ortholog is 100%.

Group of orthologs #878. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:459

Q758T1              	100.00%		C4Y084              	100.00%
Bootstrap support for Q758T1 as seed ortholog is 100%.
Bootstrap support for C4Y084 as seed ortholog is 100%.

Group of orthologs #879. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:138

Q753H7              	100.00%		C4Y948              	100.00%
Bootstrap support for Q753H7 as seed ortholog is 100%.
Bootstrap support for C4Y948 as seed ortholog is 99%.

Group of orthologs #880. Best score 459 bits
Score difference with first non-orthologous sequence - A.gossypii:459 C.lusitaniae:459

Q75DI9              	100.00%		C4Y3W7              	100.00%
Bootstrap support for Q75DI9 as seed ortholog is 100%.
Bootstrap support for C4Y3W7 as seed ortholog is 100%.

Group of orthologs #881. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 C.lusitaniae:458

Q757L7              	100.00%		C4XVM9              	100.00%
Bootstrap support for Q757L7 as seed ortholog is 100%.
Bootstrap support for C4XVM9 as seed ortholog is 100%.

Group of orthologs #882. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 C.lusitaniae:458

Q756I7              	100.00%		C4YCA3              	100.00%
Bootstrap support for Q756I7 as seed ortholog is 100%.
Bootstrap support for C4YCA3 as seed ortholog is 100%.

Group of orthologs #883. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 C.lusitaniae:458

Q75EN3              	100.00%		C4Y6X7              	100.00%
Bootstrap support for Q75EN3 as seed ortholog is 100%.
Bootstrap support for C4Y6X7 as seed ortholog is 100%.

Group of orthologs #884. Best score 458 bits
Score difference with first non-orthologous sequence - A.gossypii:458 C.lusitaniae:458

Q75DL2              	100.00%		C4YAV1              	100.00%
Bootstrap support for Q75DL2 as seed ortholog is 100%.
Bootstrap support for C4YAV1 as seed ortholog is 100%.

Group of orthologs #885. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 C.lusitaniae:457

Q75A50              	100.00%		C4XWM6              	100.00%
Bootstrap support for Q75A50 as seed ortholog is 100%.
Bootstrap support for C4XWM6 as seed ortholog is 100%.

Group of orthologs #886. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 C.lusitaniae:457

Q756F2              	100.00%		C4Y7U4              	100.00%
Bootstrap support for Q756F2 as seed ortholog is 100%.
Bootstrap support for C4Y7U4 as seed ortholog is 100%.

Group of orthologs #887. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 C.lusitaniae:457

Q9HFW3              	100.00%		C4Y1Y4              	100.00%
Bootstrap support for Q9HFW3 as seed ortholog is 100%.
Bootstrap support for C4Y1Y4 as seed ortholog is 100%.

Group of orthologs #888. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:457 C.lusitaniae:457

Q75CA8              	100.00%		C4Y8Y1              	100.00%
Bootstrap support for Q75CA8 as seed ortholog is 100%.
Bootstrap support for C4Y8Y1 as seed ortholog is 100%.

Group of orthologs #889. Best score 456 bits
Score difference with first non-orthologous sequence - A.gossypii:456 C.lusitaniae:456

Q751V9              	100.00%		C4Y1M1              	100.00%
Bootstrap support for Q751V9 as seed ortholog is 100%.
Bootstrap support for C4Y1M1 as seed ortholog is 100%.

Group of orthologs #890. Best score 456 bits
Score difference with first non-orthologous sequence - A.gossypii:456 C.lusitaniae:456

Q75BT3              	100.00%		C4XYY2              	100.00%
Bootstrap support for Q75BT3 as seed ortholog is 100%.
Bootstrap support for C4XYY2 as seed ortholog is 100%.

Group of orthologs #891. Best score 456 bits
Score difference with first non-orthologous sequence - A.gossypii:381 C.lusitaniae:273

Q75DB3              	100.00%		C4Y304              	100.00%
Bootstrap support for Q75DB3 as seed ortholog is 100%.
Bootstrap support for C4Y304 as seed ortholog is 100%.

Group of orthologs #892. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:399 C.lusitaniae:401

Q752N2              	100.00%		C4Y051              	100.00%
Bootstrap support for Q752N2 as seed ortholog is 100%.
Bootstrap support for C4Y051 as seed ortholog is 100%.

Group of orthologs #893. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 C.lusitaniae:391

Q755Z7              	100.00%		C4Y2I4              	100.00%
Bootstrap support for Q755Z7 as seed ortholog is 100%.
Bootstrap support for C4Y2I4 as seed ortholog is 100%.

Group of orthologs #894. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 C.lusitaniae:93

Q75E86              	100.00%		C4XVR2              	100.00%
Bootstrap support for Q75E86 as seed ortholog is 100%.
Bootstrap support for C4XVR2 as seed ortholog is 98%.

Group of orthologs #895. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 C.lusitaniae:200

Q754N5              	100.00%		C4Y3T9              	100.00%
Bootstrap support for Q754N5 as seed ortholog is 100%.
Bootstrap support for C4Y3T9 as seed ortholog is 100%.

Group of orthologs #896. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:10 C.lusitaniae:97

Q75CV7              	100.00%		C4XZV2              	100.00%
Bootstrap support for Q75CV7 as seed ortholog is 57%.
Alternative seed ortholog is Q754Q3 (10 bits away from this cluster)
Bootstrap support for C4XZV2 as seed ortholog is 99%.

Group of orthologs #897. Best score 455 bits
Score difference with first non-orthologous sequence - A.gossypii:455 C.lusitaniae:455

Q757U6              	100.00%		C4Y4P6              	100.00%
Bootstrap support for Q757U6 as seed ortholog is 100%.
Bootstrap support for C4Y4P6 as seed ortholog is 100%.

Group of orthologs #898. Best score 453 bits
Score difference with first non-orthologous sequence - A.gossypii:376 C.lusitaniae:237

Q755R8              	100.00%		C4XX91              	100.00%
Bootstrap support for Q755R8 as seed ortholog is 100%.
Bootstrap support for C4XX91 as seed ortholog is 100%.

Group of orthologs #899. Best score 453 bits
Score difference with first non-orthologous sequence - A.gossypii:453 C.lusitaniae:453

Q750Q9              	100.00%		C4Y384              	100.00%
Bootstrap support for Q750Q9 as seed ortholog is 100%.
Bootstrap support for C4Y384 as seed ortholog is 100%.

Group of orthologs #900. Best score 453 bits
Score difference with first non-orthologous sequence - A.gossypii:453 C.lusitaniae:453

Q757E5              	100.00%		C4Y5I0              	100.00%
Bootstrap support for Q757E5 as seed ortholog is 100%.
Bootstrap support for C4Y5I0 as seed ortholog is 100%.

Group of orthologs #901. Best score 452 bits
Score difference with first non-orthologous sequence - A.gossypii:452 C.lusitaniae:452

Q75BG4              	100.00%		C4XW84              	100.00%
Bootstrap support for Q75BG4 as seed ortholog is 100%.
Bootstrap support for C4XW84 as seed ortholog is 100%.

Group of orthologs #902. Best score 452 bits
Score difference with first non-orthologous sequence - A.gossypii:452 C.lusitaniae:452

Q75AE7              	100.00%		C4XZW8              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for C4XZW8 as seed ortholog is 100%.

Group of orthologs #903. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:451 C.lusitaniae:451

Q74ZN0              	100.00%		C4XXV9              	100.00%
Bootstrap support for Q74ZN0 as seed ortholog is 100%.
Bootstrap support for C4XXV9 as seed ortholog is 100%.

Group of orthologs #904. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:451 C.lusitaniae:451

Q757C2              	100.00%		C4XXP3              	100.00%
Bootstrap support for Q757C2 as seed ortholog is 100%.
Bootstrap support for C4XXP3 as seed ortholog is 100%.

Group of orthologs #905. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:451 C.lusitaniae:451

Q754H5              	100.00%		C4Y163              	100.00%
Bootstrap support for Q754H5 as seed ortholog is 100%.
Bootstrap support for C4Y163 as seed ortholog is 100%.

Group of orthologs #906. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:390 C.lusitaniae:397

Q753X3              	100.00%		C4YBT9              	100.00%
Bootstrap support for Q753X3 as seed ortholog is 100%.
Bootstrap support for C4YBT9 as seed ortholog is 100%.

Group of orthologs #907. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:451 C.lusitaniae:451

Q75ES6              	100.00%		C4Y3Y3              	100.00%
Bootstrap support for Q75ES6 as seed ortholog is 100%.
Bootstrap support for C4Y3Y3 as seed ortholog is 100%.

Group of orthologs #908. Best score 451 bits
Score difference with first non-orthologous sequence - A.gossypii:451 C.lusitaniae:451

Q75DT4              	100.00%		C4Y755              	100.00%
Bootstrap support for Q75DT4 as seed ortholog is 100%.
Bootstrap support for C4Y755 as seed ortholog is 100%.

Group of orthologs #909. Best score 450 bits
Score difference with first non-orthologous sequence - A.gossypii:450 C.lusitaniae:450

Q751C6              	100.00%		C4Y4J3              	100.00%
Bootstrap support for Q751C6 as seed ortholog is 100%.
Bootstrap support for C4Y4J3 as seed ortholog is 100%.

Group of orthologs #910. Best score 449 bits
Score difference with first non-orthologous sequence - A.gossypii:449 C.lusitaniae:449

Q75DR9              	100.00%		C4Y2H7              	100.00%
Bootstrap support for Q75DR9 as seed ortholog is 100%.
Bootstrap support for C4Y2H7 as seed ortholog is 100%.

Group of orthologs #911. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:448 C.lusitaniae:448

Q75AP0              	100.00%		C4XY69              	100.00%
Bootstrap support for Q75AP0 as seed ortholog is 100%.
Bootstrap support for C4XY69 as seed ortholog is 100%.

Group of orthologs #912. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:448 C.lusitaniae:448

Q75F61              	100.00%		C4Y0R3              	100.00%
Bootstrap support for Q75F61 as seed ortholog is 100%.
Bootstrap support for C4Y0R3 as seed ortholog is 100%.

Group of orthologs #913. Best score 448 bits
Score difference with first non-orthologous sequence - A.gossypii:448 C.lusitaniae:448

Q75EY9              	100.00%		C4Y234              	100.00%
Bootstrap support for Q75EY9 as seed ortholog is 100%.
Bootstrap support for C4Y234 as seed ortholog is 100%.

Group of orthologs #914. Best score 446 bits
Score difference with first non-orthologous sequence - A.gossypii:446 C.lusitaniae:446

Q758X6              	100.00%		C4XZT4              	100.00%
Bootstrap support for Q758X6 as seed ortholog is 100%.
Bootstrap support for C4XZT4 as seed ortholog is 100%.

Group of orthologs #915. Best score 446 bits
Score difference with first non-orthologous sequence - A.gossypii:446 C.lusitaniae:446

Q754H3              	100.00%		C4Y3V2              	100.00%
Bootstrap support for Q754H3 as seed ortholog is 100%.
Bootstrap support for C4Y3V2 as seed ortholog is 100%.

Group of orthologs #916. Best score 446 bits
Score difference with first non-orthologous sequence - A.gossypii:446 C.lusitaniae:446

Q75CA4              	100.00%		C4XYN3              	100.00%
Bootstrap support for Q75CA4 as seed ortholog is 100%.
Bootstrap support for C4XYN3 as seed ortholog is 100%.

Group of orthologs #917. Best score 446 bits
Score difference with first non-orthologous sequence - A.gossypii:367 C.lusitaniae:446

Q754E4              	100.00%		C4Y993              	100.00%
Bootstrap support for Q754E4 as seed ortholog is 100%.
Bootstrap support for C4Y993 as seed ortholog is 100%.

Group of orthologs #918. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 C.lusitaniae:445

Q74ZJ1              	100.00%		C4Y1D3              	100.00%
Bootstrap support for Q74ZJ1 as seed ortholog is 100%.
Bootstrap support for C4Y1D3 as seed ortholog is 100%.

Group of orthologs #919. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 C.lusitaniae:445

Q756X2              	100.00%		C4Y4J4              	100.00%
Bootstrap support for Q756X2 as seed ortholog is 100%.
Bootstrap support for C4Y4J4 as seed ortholog is 100%.

Group of orthologs #920. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 C.lusitaniae:392

Q75AV4              	100.00%		C4Y2E9              	100.00%
Bootstrap support for Q75AV4 as seed ortholog is 100%.
Bootstrap support for C4Y2E9 as seed ortholog is 100%.

Group of orthologs #921. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 C.lusitaniae:445

Q757L5              	100.00%		C4Y7Q4              	100.00%
Bootstrap support for Q757L5 as seed ortholog is 100%.
Bootstrap support for C4Y7Q4 as seed ortholog is 100%.

Group of orthologs #922. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 C.lusitaniae:445

Q75BY6              	100.00%		C4YAG5              	100.00%
Bootstrap support for Q75BY6 as seed ortholog is 100%.
Bootstrap support for C4YAG5 as seed ortholog is 100%.

Group of orthologs #923. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:444 C.lusitaniae:444

Q756G4              	100.00%		C4Y490              	100.00%
Bootstrap support for Q756G4 as seed ortholog is 100%.
Bootstrap support for C4Y490 as seed ortholog is 100%.

Group of orthologs #924. Best score 444 bits
Score difference with first non-orthologous sequence - A.gossypii:444 C.lusitaniae:444

Q75F78              	100.00%		C4YA73              	100.00%
Bootstrap support for Q75F78 as seed ortholog is 100%.
Bootstrap support for C4YA73 as seed ortholog is 100%.

Group of orthologs #925. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 C.lusitaniae:443

Q750D4              	100.00%		C4Y3V6              	100.00%
Bootstrap support for Q750D4 as seed ortholog is 100%.
Bootstrap support for C4Y3V6 as seed ortholog is 100%.

Group of orthologs #926. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 C.lusitaniae:370

Q75E18              	100.00%		C4XW69              	100.00%
Bootstrap support for Q75E18 as seed ortholog is 100%.
Bootstrap support for C4XW69 as seed ortholog is 100%.

Group of orthologs #927. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 C.lusitaniae:443

Q754E7              	100.00%		C4YCK9              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for C4YCK9 as seed ortholog is 100%.

Group of orthologs #928. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 C.lusitaniae:443

Q75DI5              	100.00%		C4YB69              	100.00%
Bootstrap support for Q75DI5 as seed ortholog is 100%.
Bootstrap support for C4YB69 as seed ortholog is 100%.

Group of orthologs #929. Best score 443 bits
Score difference with first non-orthologous sequence - A.gossypii:443 C.lusitaniae:443

Q75DS8              	100.00%		C4YBJ8              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for C4YBJ8 as seed ortholog is 100%.

Group of orthologs #930. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:442 C.lusitaniae:442

Q75AT1              	100.00%		C4Y8L7              	100.00%
Bootstrap support for Q75AT1 as seed ortholog is 100%.
Bootstrap support for C4Y8L7 as seed ortholog is 100%.

Group of orthologs #931. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:442 C.lusitaniae:442

Q75BQ2              	100.00%		C4Y8Q0              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for C4Y8Q0 as seed ortholog is 100%.

Group of orthologs #932. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:442 C.lusitaniae:442

Q75EH7              	100.00%		C4Y9W3              	100.00%
Bootstrap support for Q75EH7 as seed ortholog is 100%.
Bootstrap support for C4Y9W3 as seed ortholog is 100%.

Group of orthologs #933. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:441 C.lusitaniae:441

Q75BI7              	100.00%		C4XY95              	100.00%
Bootstrap support for Q75BI7 as seed ortholog is 100%.
Bootstrap support for C4XY95 as seed ortholog is 100%.

Group of orthologs #934. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:441 C.lusitaniae:441

Q75AH4              	100.00%		C4Y238              	100.00%
Bootstrap support for Q75AH4 as seed ortholog is 100%.
Bootstrap support for C4Y238 as seed ortholog is 100%.

Group of orthologs #935. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:314 C.lusitaniae:328

Q75AM5              	100.00%		C4Y243              	100.00%
Bootstrap support for Q75AM5 as seed ortholog is 100%.
Bootstrap support for C4Y243 as seed ortholog is 100%.

Group of orthologs #936. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:441 C.lusitaniae:441

Q75A16              	100.00%		C4Y5N0              	100.00%
Bootstrap support for Q75A16 as seed ortholog is 100%.
Bootstrap support for C4Y5N0 as seed ortholog is 100%.

Group of orthologs #937. Best score 441 bits
Score difference with first non-orthologous sequence - A.gossypii:235 C.lusitaniae:441

Q759X1              	100.00%		C4Y802              	100.00%
Bootstrap support for Q759X1 as seed ortholog is 100%.
Bootstrap support for C4Y802 as seed ortholog is 100%.

Group of orthologs #938. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 C.lusitaniae:440

Q757B6              	100.00%		C4XWD8              	100.00%
Bootstrap support for Q757B6 as seed ortholog is 100%.
Bootstrap support for C4XWD8 as seed ortholog is 100%.

Group of orthologs #939. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 C.lusitaniae:339

Q758C2              	100.00%		C4XXG2              	100.00%
Bootstrap support for Q758C2 as seed ortholog is 100%.
Bootstrap support for C4XXG2 as seed ortholog is 100%.

Group of orthologs #940. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:379 C.lusitaniae:376

Q75DK1              	100.00%		C4XY16              	100.00%
Bootstrap support for Q75DK1 as seed ortholog is 100%.
Bootstrap support for C4XY16 as seed ortholog is 100%.

Group of orthologs #941. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 C.lusitaniae:440

Q754L1              	100.00%		C4Y6Y9              	100.00%
Bootstrap support for Q754L1 as seed ortholog is 100%.
Bootstrap support for C4Y6Y9 as seed ortholog is 100%.

Group of orthologs #942. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:358 C.lusitaniae:339

Q754M1              	100.00%		C4Y9V7              	100.00%
Bootstrap support for Q754M1 as seed ortholog is 100%.
Bootstrap support for C4Y9V7 as seed ortholog is 100%.

Group of orthologs #943. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:281 C.lusitaniae:302

Q75ES8              	100.00%		C4Y3Y5              	100.00%
Bootstrap support for Q75ES8 as seed ortholog is 100%.
Bootstrap support for C4Y3Y5 as seed ortholog is 100%.

Group of orthologs #944. Best score 440 bits
Score difference with first non-orthologous sequence - A.gossypii:440 C.lusitaniae:440

Q8NJR2              	100.00%		C4Y8Q8              	100.00%
Bootstrap support for Q8NJR2 as seed ortholog is 100%.
Bootstrap support for C4Y8Q8 as seed ortholog is 100%.

Group of orthologs #945. Best score 439 bits
Score difference with first non-orthologous sequence - A.gossypii:439 C.lusitaniae:439

Q754X2              	100.00%		C4Y968              	100.00%
Bootstrap support for Q754X2 as seed ortholog is 100%.
Bootstrap support for C4Y968 as seed ortholog is 100%.

Group of orthologs #946. Best score 439 bits
Score difference with first non-orthologous sequence - A.gossypii:439 C.lusitaniae:439

Q759J2              	100.00%		C4Y7U0              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for C4Y7U0 as seed ortholog is 100%.

Group of orthologs #947. Best score 438 bits
Score difference with first non-orthologous sequence - A.gossypii:438 C.lusitaniae:438

Q751E6              	100.00%		C4YAG8              	100.00%
Bootstrap support for Q751E6 as seed ortholog is 100%.
Bootstrap support for C4YAG8 as seed ortholog is 100%.

Group of orthologs #948. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:437 C.lusitaniae:437

Q754T6              	100.00%		C4XVZ9              	100.00%
Bootstrap support for Q754T6 as seed ortholog is 100%.
Bootstrap support for C4XVZ9 as seed ortholog is 100%.

Group of orthologs #949. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:437 C.lusitaniae:437

Q75BV6              	100.00%		C4XXD6              	100.00%
Bootstrap support for Q75BV6 as seed ortholog is 100%.
Bootstrap support for C4XXD6 as seed ortholog is 100%.

Group of orthologs #950. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:437 C.lusitaniae:437

Q75A62              	100.00%		C4Y1A3              	100.00%
Bootstrap support for Q75A62 as seed ortholog is 100%.
Bootstrap support for C4Y1A3 as seed ortholog is 100%.

Group of orthologs #951. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:437 C.lusitaniae:437

Q75C10              	100.00%		C4Y483              	100.00%
Bootstrap support for Q75C10 as seed ortholog is 100%.
Bootstrap support for C4Y483 as seed ortholog is 100%.

Group of orthologs #952. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:437 C.lusitaniae:437

Q75DT8              	100.00%		C4Y924              	100.00%
Bootstrap support for Q75DT8 as seed ortholog is 100%.
Bootstrap support for C4Y924 as seed ortholog is 100%.

Group of orthologs #953. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:149

Q74ZR9              	100.00%		C4YAI8              	100.00%
Q758P7              	29.18%		C4Y971              	38.74%
Bootstrap support for Q74ZR9 as seed ortholog is 100%.
Bootstrap support for C4YAI8 as seed ortholog is 99%.

Group of orthologs #954. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q753P3              	100.00%		C4XYT6              	100.00%
Bootstrap support for Q753P3 as seed ortholog is 100%.
Bootstrap support for C4XYT6 as seed ortholog is 100%.

Group of orthologs #955. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q757X1              	100.00%		C4XZ55              	100.00%
Bootstrap support for Q757X1 as seed ortholog is 100%.
Bootstrap support for C4XZ55 as seed ortholog is 100%.

Group of orthologs #956. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q752C8              	100.00%		C4Y5F2              	100.00%
Bootstrap support for Q752C8 as seed ortholog is 100%.
Bootstrap support for C4Y5F2 as seed ortholog is 100%.

Group of orthologs #957. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q755A1              	100.00%		C4Y425              	100.00%
Bootstrap support for Q755A1 as seed ortholog is 100%.
Bootstrap support for C4Y425 as seed ortholog is 100%.

Group of orthologs #958. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q75CW2              	100.00%		C4Y1M4              	100.00%
Bootstrap support for Q75CW2 as seed ortholog is 100%.
Bootstrap support for C4Y1M4 as seed ortholog is 100%.

Group of orthologs #959. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q751R9              	100.00%		C4YB25              	100.00%
Bootstrap support for Q751R9 as seed ortholog is 100%.
Bootstrap support for C4YB25 as seed ortholog is 100%.

Group of orthologs #960. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q75F69              	100.00%		C4Y162              	100.00%
Bootstrap support for Q75F69 as seed ortholog is 100%.
Bootstrap support for C4Y162 as seed ortholog is 100%.

Group of orthologs #961. Best score 436 bits
Score difference with first non-orthologous sequence - A.gossypii:436 C.lusitaniae:436

Q75B78              	100.00%		C4Y857              	100.00%
Bootstrap support for Q75B78 as seed ortholog is 100%.
Bootstrap support for C4Y857 as seed ortholog is 100%.

Group of orthologs #962. Best score 435 bits
Score difference with first non-orthologous sequence - A.gossypii:435 C.lusitaniae:435

Q75E21              	100.00%		C4Y7W8              	100.00%
Bootstrap support for Q75E21 as seed ortholog is 100%.
Bootstrap support for C4Y7W8 as seed ortholog is 100%.

Group of orthologs #963. Best score 434 bits
Score difference with first non-orthologous sequence - A.gossypii:269 C.lusitaniae:253

Q75BH1              	100.00%		C4Y0V9              	100.00%
Bootstrap support for Q75BH1 as seed ortholog is 100%.
Bootstrap support for C4Y0V9 as seed ortholog is 100%.

Group of orthologs #964. Best score 434 bits
Score difference with first non-orthologous sequence - A.gossypii:434 C.lusitaniae:434

Q75A55              	100.00%		C4Y2G4              	100.00%
Bootstrap support for Q75A55 as seed ortholog is 100%.
Bootstrap support for C4Y2G4 as seed ortholog is 100%.

Group of orthologs #965. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:158 C.lusitaniae:433

Q757Z2              	100.00%		C4YB72              	100.00%
                    	       		C4YA72              	7.14%
Bootstrap support for Q757Z2 as seed ortholog is 99%.
Bootstrap support for C4YB72 as seed ortholog is 100%.

Group of orthologs #966. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:336 C.lusitaniae:433

Q752P5              	100.00%		C4Y632              	100.00%
Bootstrap support for Q752P5 as seed ortholog is 100%.
Bootstrap support for C4Y632 as seed ortholog is 100%.

Group of orthologs #967. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:433 C.lusitaniae:366

Q752F2              	100.00%		C4Y927              	100.00%
Bootstrap support for Q752F2 as seed ortholog is 100%.
Bootstrap support for C4Y927 as seed ortholog is 100%.

Group of orthologs #968. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:433 C.lusitaniae:433

Q754W8              	100.00%		C4Y8W4              	100.00%
Bootstrap support for Q754W8 as seed ortholog is 100%.
Bootstrap support for C4Y8W4 as seed ortholog is 100%.

Group of orthologs #969. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:433 C.lusitaniae:433

Q75F43              	100.00%		C4Y2W0              	100.00%
Bootstrap support for Q75F43 as seed ortholog is 100%.
Bootstrap support for C4Y2W0 as seed ortholog is 100%.

Group of orthologs #970. Best score 433 bits
Score difference with first non-orthologous sequence - A.gossypii:433 C.lusitaniae:433

Q75F31              	100.00%		C4Y6C2              	100.00%
Bootstrap support for Q75F31 as seed ortholog is 100%.
Bootstrap support for C4Y6C2 as seed ortholog is 100%.

Group of orthologs #971. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:432 C.lusitaniae:432

Q756Y3              	100.00%		C4XYD5              	100.00%
                    	       		C4XZU6              	95.38%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for C4XYD5 as seed ortholog is 100%.

Group of orthologs #972. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:432 C.lusitaniae:432

Q75E90              	100.00%		C4XVU1              	100.00%
Bootstrap support for Q75E90 as seed ortholog is 100%.
Bootstrap support for C4XVU1 as seed ortholog is 100%.

Group of orthologs #973. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:432 C.lusitaniae:432

Q75C85              	100.00%		C4XY04              	100.00%
Bootstrap support for Q75C85 as seed ortholog is 100%.
Bootstrap support for C4XY04 as seed ortholog is 100%.

Group of orthologs #974. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:340 C.lusitaniae:432

Q750F7              	100.00%		C4Y7T4              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for C4Y7T4 as seed ortholog is 100%.

Group of orthologs #975. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:432 C.lusitaniae:432

Q75D71              	100.00%		C4XXZ6              	100.00%
Bootstrap support for Q75D71 as seed ortholog is 100%.
Bootstrap support for C4XXZ6 as seed ortholog is 100%.

Group of orthologs #976. Best score 432 bits
Score difference with first non-orthologous sequence - A.gossypii:432 C.lusitaniae:262

Q75CU1              	100.00%		C4YC05              	100.00%
Bootstrap support for Q75CU1 as seed ortholog is 100%.
Bootstrap support for C4YC05 as seed ortholog is 100%.

Group of orthologs #977. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:431 C.lusitaniae:386

Q751I2              	100.00%		C4XY70              	100.00%
Bootstrap support for Q751I2 as seed ortholog is 100%.
Bootstrap support for C4XY70 as seed ortholog is 100%.

Group of orthologs #978. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:293 C.lusitaniae:302

Q75AT8              	100.00%		C4XZZ8              	100.00%
Bootstrap support for Q75AT8 as seed ortholog is 100%.
Bootstrap support for C4XZZ8 as seed ortholog is 100%.

Group of orthologs #979. Best score 431 bits
Score difference with first non-orthologous sequence - A.gossypii:165 C.lusitaniae:153

Q759U8              	100.00%		C4Y327              	100.00%
Bootstrap support for Q759U8 as seed ortholog is 100%.
Bootstrap support for C4Y327 as seed ortholog is 100%.

Group of orthologs #980. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 C.lusitaniae:430

Q75EW2              	100.00%		C4XXZ2              	100.00%
Bootstrap support for Q75EW2 as seed ortholog is 100%.
Bootstrap support for C4XXZ2 as seed ortholog is 100%.

Group of orthologs #981. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 C.lusitaniae:376

Q75BK5              	100.00%		C4Y2N5              	100.00%
Bootstrap support for Q75BK5 as seed ortholog is 100%.
Bootstrap support for C4Y2N5 as seed ortholog is 100%.

Group of orthologs #982. Best score 430 bits
Score difference with first non-orthologous sequence - A.gossypii:430 C.lusitaniae:430

Q756N3              	100.00%		C4YAK0              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for C4YAK0 as seed ortholog is 100%.

Group of orthologs #983. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 C.lusitaniae:428

Q74ZB1              	100.00%		C4Y8M3              	100.00%
Bootstrap support for Q74ZB1 as seed ortholog is 100%.
Bootstrap support for C4Y8M3 as seed ortholog is 100%.

Group of orthologs #984. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 C.lusitaniae:428

Q75CG7              	100.00%		C4Y063              	100.00%
Bootstrap support for Q75CG7 as seed ortholog is 100%.
Bootstrap support for C4Y063 as seed ortholog is 100%.

Group of orthologs #985. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 C.lusitaniae:428

Q757J3              	100.00%		C4Y941              	100.00%
Bootstrap support for Q757J3 as seed ortholog is 100%.
Bootstrap support for C4Y941 as seed ortholog is 100%.

Group of orthologs #986. Best score 428 bits
Score difference with first non-orthologous sequence - A.gossypii:428 C.lusitaniae:428

Q75F75              	100.00%		C4YA50              	100.00%
Bootstrap support for Q75F75 as seed ortholog is 100%.
Bootstrap support for C4YA50 as seed ortholog is 100%.

Group of orthologs #987. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:427 C.lusitaniae:427

Q74Z35              	100.00%		C4Y275              	100.00%
Bootstrap support for Q74Z35 as seed ortholog is 100%.
Bootstrap support for C4Y275 as seed ortholog is 100%.

Group of orthologs #988. Best score 427 bits
Score difference with first non-orthologous sequence - A.gossypii:427 C.lusitaniae:427

Q759S4              	100.00%		C4Y7B1              	100.00%
Bootstrap support for Q759S4 as seed ortholog is 100%.
Bootstrap support for C4Y7B1 as seed ortholog is 100%.

Group of orthologs #989. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 C.lusitaniae:25

Q752K2              	100.00%		C4XWQ4              	100.00%
Bootstrap support for Q752K2 as seed ortholog is 100%.
Bootstrap support for C4XWQ4 as seed ortholog is 23%.
Alternative seed ortholog is C4Y1N1 (25 bits away from this cluster)

Group of orthologs #990. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 C.lusitaniae:143

Q75BA7              	100.00%		C4XYH7              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for C4XYH7 as seed ortholog is 99%.

Group of orthologs #991. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 C.lusitaniae:426

Q74Z82              	100.00%		C4Y8I1              	100.00%
Bootstrap support for Q74Z82 as seed ortholog is 100%.
Bootstrap support for C4Y8I1 as seed ortholog is 100%.

Group of orthologs #992. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 C.lusitaniae:426

Q75BZ0              	100.00%		C4Y0J2              	100.00%
Bootstrap support for Q75BZ0 as seed ortholog is 100%.
Bootstrap support for C4Y0J2 as seed ortholog is 100%.

Group of orthologs #993. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 C.lusitaniae:425

Q752P3              	100.00%		C4XWK1              	100.00%
Q75CW6              	22.43%		
Q75CW7              	21.86%		
Q75CW8              	12.93%		
Bootstrap support for Q752P3 as seed ortholog is 100%.
Bootstrap support for C4XWK1 as seed ortholog is 100%.

Group of orthologs #994. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 C.lusitaniae:425

Q74ZB4              	100.00%		C4XZY9              	100.00%
Bootstrap support for Q74ZB4 as seed ortholog is 100%.
Bootstrap support for C4XZY9 as seed ortholog is 100%.

Group of orthologs #995. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 C.lusitaniae:425

Q75CV1              	100.00%		C4Y0H7              	100.00%
Bootstrap support for Q75CV1 as seed ortholog is 100%.
Bootstrap support for C4Y0H7 as seed ortholog is 100%.

Group of orthologs #996. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 C.lusitaniae:425

Q757N7              	100.00%		C4Y6A4              	100.00%
Bootstrap support for Q757N7 as seed ortholog is 100%.
Bootstrap support for C4Y6A4 as seed ortholog is 100%.

Group of orthologs #997. Best score 425 bits
Score difference with first non-orthologous sequence - A.gossypii:425 C.lusitaniae:425

Q75DG3              	100.00%		C4Y859              	100.00%
Bootstrap support for Q75DG3 as seed ortholog is 100%.
Bootstrap support for C4Y859 as seed ortholog is 100%.

Group of orthologs #998. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:424 C.lusitaniae:424

Q759A9              	100.00%		C4XW29              	100.00%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for C4XW29 as seed ortholog is 100%.

Group of orthologs #999. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:129 C.lusitaniae:16

O74267              	100.00%		C4YA33              	100.00%
Bootstrap support for O74267 as seed ortholog is 99%.
Bootstrap support for C4YA33 as seed ortholog is 68%.
Alternative seed ortholog is C4YAQ2 (16 bits away from this cluster)

Group of orthologs #1000. Best score 424 bits
Score difference with first non-orthologous sequence - A.gossypii:424 C.lusitaniae:424

Q75DL4              	100.00%		C4Y2D4              	100.00%
Bootstrap support for Q75DL4 as seed ortholog is 100%.
Bootstrap support for C4Y2D4 as seed ortholog is 100%.