<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="569" inparalogs="2094"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Oryctolagus cuniculus " NCBITaxId="9986">
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        <gene id="2008" protId="P80912" geneId="HINT1"/>
        <gene id="2009" protId="G1SV28" geneId="LOC100343529"/>
        <gene id="2010" protId="G1U3V0" geneId="uncharacterized_G1U3V0"/>
        <gene id="2011" protId="G1SR26" geneId="LOC100354835"/>
        <gene id="2013" protId="P29338" geneId="EIF4E"/>
        <gene id="2014" protId="G1STZ1" geneId="uncharacterized_G1STZ1"/>
        <gene id="2015" protId="G1SLZ9" geneId="LOC100348102"/>
        <gene id="2016" protId="G1SCX8" geneId="LOC100351325"/>
        <gene id="2018" protId="G1TB40" geneId="LOC100347550"/>
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        <gene id="2023" protId="G1SIZ2" geneId="LOC100354063"/>
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        <gene id="2064" protId="G1T5I2" geneId="LOC100348833"/>
        <gene id="2065" protId="G1TY04" geneId="uncharacterized_G1TY04"/>
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        <gene id="2082" protId="G1T0Z2" geneId="LOC100350091"/>
        <gene id="2083" protId="G1TE68" geneId="LOC100353691"/>
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        <gene id="2086" protId="G1TUJ8" geneId="LOC100347535"/>
        <gene id="2087" protId="G1U2Q4" geneId="LOC100348485"/>
        <gene id="2088" protId="G1U4A6" geneId="LOC100358742"/>
        <gene id="2089" protId="G1U2G1" geneId="LOC100357913"/>
        <gene id="2090" protId="O62695" geneId="H2AFV"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="O.cuniculus" link="http://www.uniprot.org/taxonomy/9986"/>
    </notes>
  </species>
  <species name="Vittaforma corneae " NCBITaxId="993615">
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        <gene id="1806" protId="L2GQQ5" geneId="VICG_00394"/>
        <gene id="1808" protId="L2GPD3" geneId="VICG_00473"/>
        <gene id="1813" protId="L2GL13" geneId="VICG_01946"/>
        <gene id="1817" protId="L2GMI8" geneId="VICG_00905"/>
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        <gene id="1833" protId="L2GJ44" geneId="VICG_02043"/>
        <gene id="1835" protId="L2GNQ0" geneId="VICG_00643"/>
        <gene id="1837" protId="L2GNL7" geneId="VICG_00847"/>
        <gene id="1839" protId="L2GN91" geneId="VICG_00701"/>
        <gene id="1841" protId="L2GKN5" geneId="VICG_01858"/>
        <gene id="1843" protId="L2GMT7" geneId="VICG_01172"/>
        <gene id="1850" protId="L2GMR8" geneId="VICG_00836"/>
        <gene id="1855" protId="L2GKR5" geneId="VICG_01462"/>
        <gene id="1858" protId="L2GQD7" geneId="VICG_00149"/>
        <gene id="1860" protId="L2GNE8" geneId="VICG_00765"/>
        <gene id="1865" protId="L2GLL3" geneId="VICG_01240"/>
        <gene id="1869" protId="L2GMQ1" geneId="VICG_00945"/>
        <gene id="1871" protId="L2GNA7" geneId="VICG_01002"/>
        <gene id="1873" protId="L2GMF3" geneId="VICG_01293"/>
        <gene id="1880" protId="L2GNF5" geneId="VICG_00527"/>
        <gene id="1884" protId="L2GLR9" geneId="VICG_01143"/>
        <gene id="1888" protId="L2GKM4" geneId="VICG_01937"/>
        <gene id="1891" protId="L2GM42" geneId="VICG_01095"/>
        <gene id="1893" protId="L2GN48" geneId="VICG_00723"/>
        <gene id="1895" protId="L2GNB3" geneId="VICG_01007"/>
        <gene id="1897" protId="L2GLE3" geneId="VICG_01448"/>
        <gene id="1912" protId="L2GJB0" geneId="VICG_01981"/>
        <gene id="1920" protId="L2GP11" geneId="VICG_00639"/>
        <gene id="1922" protId="L2GK54" geneId="VICG_01715"/>
        <gene id="1924" protId="L2GQ17" geneId="VICG_00009"/>
        <gene id="1926" protId="L2GL58" geneId="VICG_01724"/>
        <gene id="1928" protId="L2GKE8" geneId="VICG_02196"/>
        <gene id="1930" protId="L2GLV4" geneId="VICG_01469"/>
        <gene id="1936" protId="L2GK75" geneId="VICG_01656"/>
        <gene id="1939" protId="L2GL15" geneId="VICG_01437"/>
        <gene id="1941" protId="L2GNA8" geneId="VICG_00721"/>
        <gene id="1944" protId="L2GLE1" geneId="VICG_01202"/>
        <gene id="1946" protId="L2GME6" geneId="VICG_00917"/>
        <gene id="1948" protId="L2GP73" geneId="VICG_00533"/>
        <gene id="1949" protId="L2GPJ8" geneId="VICG_00534"/>
        <gene id="1955" protId="L2GKR6" geneId="VICG_01708"/>
        <gene id="1959" protId="L2GL20" geneId="VICG_01574"/>
        <gene id="1961" protId="L2GN23" geneId="VICG_00698"/>
        <gene id="1963" protId="L2GPX5" geneId="VICG_00206"/>
        <gene id="1965" protId="L2GNS1" geneId="VICG_00590"/>
        <gene id="1973" protId="L2GKC3" geneId="VICG_01990"/>
        <gene id="1975" protId="L2GLC3" geneId="VICG_01549"/>
        <gene id="1977" protId="L2GLS3" geneId="VICG_01148"/>
        <gene id="1981" protId="L2GKF4" geneId="VICG_01882"/>
        <gene id="1984" protId="L2GP92" geneId="VICG_00735"/>
        <gene id="1986" protId="L2GJA4" geneId="VICG_02245"/>
        <gene id="1988" protId="L2GL79" geneId="VICG_01504"/>
        <gene id="1994" protId="L2GLH8" geneId="VICG_01205"/>
        <gene id="1999" protId="L2GMB0" geneId="VICG_00998"/>
        <gene id="2001" protId="L2GM55" geneId="VICG_00990"/>
        <gene id="2007" protId="L2GKN9" geneId="VICG_01783"/>
        <gene id="2012" protId="L2GN55" geneId="VICG_00660"/>
        <gene id="2017" protId="L2GL57" geneId="VICG_01919"/>
        <gene id="2020" protId="L2GKL1" geneId="VICG_01632"/>
        <gene id="2022" protId="L2GQJ8" geneId="VICG_00219"/>
        <gene id="2024" protId="L2GPR6" geneId="VICG_00599"/>
        <gene id="2026" protId="L2GPS4" geneId="VICG_00156"/>
        <gene id="2028" protId="L2GPM4" geneId="VICG_00158"/>
        <gene id="2031" protId="L2GNY8" geneId="VICG_00303"/>
        <gene id="2033" protId="L2GK71" geneId="VICG_01651"/>
        <gene id="2035" protId="L2GKU6" geneId="VICG_01743"/>
        <gene id="2036" protId="L2GK78" geneId="VICG_01740"/>
        <gene id="2046" protId="L2GMN9" geneId="VICG_01088"/>
        <gene id="2051" protId="L2GJ48" geneId="VICG_02071"/>
        <gene id="2052" protId="L2GL22" geneId="VICG_01415"/>
        <gene id="2054" protId="L2GMR4" geneId="VICG_00831"/>
        <gene id="2056" protId="L2GP02" geneId="VICG_00629"/>
        <gene id="2058" protId="L2GLN9" geneId="VICG_01525"/>
        <gene id="2060" protId="L2GQL3" geneId="VICG_00125"/>
        <gene id="2066" protId="L2GJC3" geneId="VICG_01996"/>
        <gene id="2069" protId="L2GN53" geneId="VICG_00728"/>
        <gene id="2071" protId="L2GKE4" geneId="VICG_01593"/>
        <gene id="2073" protId="L2GND9" geneId="VICG_01184"/>
        <gene id="2075" protId="L2GK69" geneId="VICG_01906"/>
        <gene id="2077" protId="L2GKG4" geneId="VICG_01892"/>
        <gene id="2079" protId="L2GKW7" geneId="VICG_01819"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="V.corneae" link="http://www.uniprot.org/taxonomy/993615"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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