<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="11078" inparalogs="23440"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Nomascus leucogenys " NCBITaxId="61853">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
      <genes>
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        <gene id="3" protId="G1S1B6" geneId="LOC100601904"/>
        <gene id="5" protId="G1RP36" geneId="LOC100598125"/>
        <gene id="7" protId="G1S123" geneId="BIRC6"/>
        <gene id="9" protId="G1R8K9" geneId="LOC100599265"/>
        <gene id="11" protId="G1S2Q0" geneId="LOC100581654"/>
        <gene id="13" protId="G1QGQ6" geneId="uncharacterized_G1QGQ6"/>
        <gene id="15" protId="G1S241" geneId="uncharacterized_G1S241"/>
        <gene id="17" protId="G1QXY9" geneId="LRP2"/>
        <gene id="19" protId="G1RSE7" geneId="SACS"/>
        <gene id="21" protId="G1QXV1" geneId="CSMD3"/>
        <gene id="23" protId="G1RII7" geneId="LOC100587193"/>
        <gene id="25" protId="G1QPB5" geneId="DNAH10"/>
        <gene id="27" protId="G1REX4" geneId="USP34"/>
        <gene id="29" protId="G1RZP1" geneId="LOC100598504"/>
        <gene id="32" protId="G1RCH6" geneId="LOC100607701"/>
        <gene id="34" protId="G1RDI2" geneId="uncharacterized_G1RDI2"/>
        <gene id="36" protId="G1R514" geneId="uncharacterized_G1R514"/>
        <gene id="38" protId="G1RNY5" geneId="LOC100595944"/>
        <gene id="40" protId="G1S8R7" geneId="LOC100583271"/>
        <gene id="42" protId="G1S494" geneId="DNAH11"/>
        <gene id="44" protId="G1RXZ2" geneId="CSMD1"/>
        <gene id="46" protId="G1RLF9" geneId="uncharacterized_G1RLF9"/>
        <gene id="48" protId="G1RKS5" geneId="uncharacterized_G1RKS5"/>
        <gene id="50" protId="G1RVU7" geneId="LOC100583493"/>
        <gene id="52" protId="G1RP75" geneId="FBN2"/>
        <gene id="54" protId="G1RAA6" geneId="LOC100607011"/>
        <gene id="56" protId="G1R6B4" geneId="UNC80"/>
        <gene id="58" protId="G1QTW3" geneId="UBR5"/>
        <gene id="60" protId="G1RE98" geneId="LOC100595864"/>
        <gene id="62" protId="G1R607" geneId="LOC100587185"/>
        <gene id="64" protId="G1QRQ1" geneId="LOC100581856"/>
        <gene id="65" protId="G1RML2" geneId="uncharacterized_G1RML2"/>
        <gene id="67" protId="G1RJA9" geneId="NF1"/>
        <gene id="69" protId="G1RMB5" geneId="LOC100582587"/>
        <gene id="71" protId="G1RUC6" geneId="GPR98"/>
        <gene id="73" protId="G1QU12" geneId="LOC100587159"/>
        <gene id="75" protId="G1QRY7" geneId="uncharacterized_G1QRY7"/>
        <gene id="77" protId="G1QTC7" geneId="LOC100603604"/>
        <gene id="79" protId="G1QKY6" geneId="NBEA"/>
        <gene id="81" protId="G1S3U6" geneId="LOC100581083"/>
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        <gene id="85" protId="G1QQA3" geneId="FREM2"/>
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        <gene id="89" protId="G1QY48" geneId="ODZ2"/>
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        <gene id="93" protId="G1QXJ2" geneId="MLL3"/>
        <gene id="95" protId="G1S6J1" geneId="uncharacterized_G1S6J1"/>
        <gene id="97" protId="G1RS97" geneId="PRKDC"/>
        <gene id="99" protId="G1QIH0" geneId="LOC100582432"/>
        <gene id="101" protId="G1RX52" geneId="USP24"/>
        <gene id="103" protId="G1QQC3" geneId="uncharacterized_G1QQC3"/>
        <gene id="105" protId="G1QZX2" geneId="ITPR2"/>
        <gene id="107" protId="G1RDZ9" geneId="uncharacterized_G1RDZ9"/>
        <gene id="109" protId="G1QGL4" geneId="uncharacterized_G1QGL4"/>
        <gene id="111" protId="G1QSJ3" geneId="DNAJC13"/>
        <gene id="113" protId="G1RYD1" geneId="uncharacterized_G1RYD1"/>
        <gene id="115" protId="G1RPP7" geneId="CUBN"/>
        <gene id="117" protId="G1QN68" geneId="ZFHX4"/>
        <gene id="119" protId="G1RF97" geneId="uncharacterized_G1RF97"/>
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        <gene id="123" protId="G1RN64" geneId="VPS13C"/>
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        <gene id="127" protId="G1RAB1" geneId="uncharacterized_G1RAB1"/>
        <gene id="129" protId="G1QW43" geneId="LOC100592758"/>
        <gene id="131" protId="G1RBL5" geneId="POLE"/>
        <gene id="133" protId="G1R5V5" geneId="NBEAL1"/>
        <gene id="135" protId="G1QHE5" geneId="uncharacterized_G1QHE5"/>
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        <gene id="139" protId="G1S518" geneId="EML5"/>
        <gene id="141" protId="G1RML6" geneId="DMXL1"/>
        <gene id="143" protId="G1S0Q8" geneId="uncharacterized_G1S0Q8"/>
        <gene id="145" protId="G1REA5" geneId="POLR2A"/>
        <gene id="147" protId="G1RV64" geneId="uncharacterized_G1RV64"/>
        <gene id="148" protId="G1R6S6" geneId="LOC100603632"/>
        <gene id="151" protId="G1QH25" geneId="PI4KA"/>
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        <gene id="155" protId="G1QSG4" geneId="LOC100604681"/>
        <gene id="157" protId="G1R4J1" geneId="uncharacterized_G1R4J1"/>
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        <gene id="171" protId="G1R0C1" geneId="LOC100604660"/>
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        <gene id="175" protId="G1RQ30" geneId="uncharacterized_G1RQ30"/>
        <gene id="177" protId="G1RDH0" geneId="ANKHD1"/>
        <gene id="179" protId="G1QJF9" geneId="LOC100607577"/>
        <gene id="181" protId="G1S683" geneId="ZZEF1"/>
        <gene id="183" protId="G1RYW3" geneId="UTRN"/>
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        <gene id="189" protId="G1R8K8" geneId="NALCN"/>
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        <gene id="197" protId="G1RG61" geneId="uncharacterized_G1RG61"/>
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        <gene id="201" protId="G1S2C7" geneId="uncharacterized_G1S2C7"/>
        <gene id="203" protId="G1R311" geneId="uncharacterized_G1R311"/>
        <gene id="205" protId="G1QPS9" geneId="OTOF"/>
        <gene id="207" protId="G1S7T7" geneId="SCN8A"/>
        <gene id="209" protId="G1R5U9" geneId="DOCK3"/>
        <gene id="211" protId="G1RWQ0" geneId="MYH9"/>
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        <gene id="215" protId="G1RJN8" geneId="ARFGEF1"/>
        <gene id="217" protId="G1QIA9" geneId="uncharacterized_G1QIA9"/>
        <gene id="219" protId="G1RB59" geneId="uncharacterized_G1RB59"/>
        <gene id="221" protId="G1QK66" geneId="PLXNA1"/>
        <gene id="223" protId="G1RRP1" geneId="uncharacterized_G1RRP1"/>
        <gene id="225" protId="G1R6Y8" geneId="uncharacterized_G1R6Y8"/>
        <gene id="227" protId="G1S246" geneId="NIPBL"/>
        <gene id="229" protId="G1QPE4" geneId="LOC100591036"/>
        <gene id="231" protId="G1RMQ6" geneId="LOC100586924"/>
        <gene id="233" protId="G1RE03" geneId="KIF1B"/>
        <gene id="235" protId="G1QSE7" geneId="LOC100581263"/>
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        <gene id="237" protId="G1QT68" geneId="SCN1A"/>
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        <gene id="240" protId="G1QLK1" geneId="LOC100580582"/>
        <gene id="242" protId="G1RUY3" geneId="uncharacterized_G1RUY3"/>
        <gene id="243" protId="H9H9W4" geneId="uncharacterized_H9H9W4"/>
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        <gene id="247" protId="G1R6J1" geneId="uncharacterized_G1R6J1"/>
        <gene id="249" protId="G1RY55" geneId="LOC100601549"/>
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        <gene id="255" protId="G1RW92" geneId="LOC100589652"/>
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        <gene id="261" protId="M3Z992" geneId="PIKFYVE"/>
        <gene id="263" protId="G1QWK9" geneId="LOC100589104"/>
        <gene id="265" protId="G1RPX2" geneId="LOC100591681"/>
        <gene id="267" protId="G1QY16" geneId="LOC100598462"/>
        <gene id="269" protId="G1QKK6" geneId="uncharacterized_G1QKK6"/>
        <gene id="271" protId="G1RFA2" geneId="LOC100582094"/>
        <gene id="273" protId="G1RH92" geneId="uncharacterized_G1RH92"/>
        <gene id="275" protId="G1R4R3" geneId="LOC100601935"/>
        <gene id="277" protId="G1R0C4" geneId="NOTCH2"/>
        <gene id="279" protId="G1RQQ0" geneId="MYOF"/>
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        <gene id="283" protId="G1RJ86" geneId="uncharacterized_G1RJ86"/>
        <gene id="285" protId="G1RK86" geneId="DOCK4"/>
        <gene id="287" protId="G1QYT7" geneId="uncharacterized_G1QYT7"/>
        <gene id="289" protId="G1RT58" geneId="NUP205"/>
        <gene id="291" protId="G1R2U7" geneId="LOC100598368"/>
        <gene id="293" protId="G1RVF8" geneId="CKAP5"/>
        <gene id="295" protId="G1R759" geneId="TBCEL"/>
        <gene id="297" protId="G1RU66" geneId="MYO9A"/>
        <gene id="299" protId="G1S2I8" geneId="LOC100592679"/>
        <gene id="301" protId="G1RCZ0" geneId="PSME4"/>
        <gene id="303" protId="G1QTL0" geneId="LRP6"/>
        <gene id="305" protId="G1R469" geneId="UNC13C"/>
        <gene id="307" protId="G1RMX1" geneId="uncharacterized_G1RMX1"/>
        <gene id="309" protId="G1QUN0" geneId="uncharacterized_G1QUN0"/>
        <gene id="311" protId="G1R5J0" geneId="ARFGEF2"/>
        <gene id="313" protId="G1R5H8" geneId="LOC100591959"/>
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        <gene id="322" protId="G1RSN7" geneId="LOC100592193"/>
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        <gene id="326" protId="G1QQW7" geneId="uncharacterized_G1QQW7"/>
        <gene id="328" protId="G1QLH1" geneId="LOC100598480"/>
        <gene id="330" protId="G1QTE2" geneId="LOC100580759"/>
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        <gene id="340" protId="G1RH82" geneId="uncharacterized_G1RH82"/>
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        <gene id="23234" protId="G1R8X4" geneId="LOC100591876"/>
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        <gene id="23361" protId="G1RVI7" geneId="LOC100600365"/>
        <gene id="23363" protId="G1RY10" geneId="LOC100581729"/>
        <gene id="23365" protId="G1RJP1" geneId="LOC100598087"/>
        <gene id="23367" protId="M3ZBF1" geneId="uncharacterized_M3ZBF1"/>
        <gene id="23369" protId="G1RLK6" geneId="uncharacterized_G1RLK6"/>
        <gene id="23373" protId="G1QV38" geneId="LOC100598803"/>
        <gene id="23375" protId="G1R705" geneId="LOC100582516"/>
        <gene id="23377" protId="G1QPL8" geneId="LOC100587291"/>
        <gene id="23379" protId="G1RU50" geneId="LOC100580874"/>
        <gene id="23381" protId="G1RZ47" geneId="LOC100606791"/>
        <gene id="23384" protId="G1QJJ5" geneId="LOC100585592"/>
        <gene id="23386" protId="G1RUE8" geneId="TRDN"/>
        <gene id="23388" protId="G1RQQ4" geneId="uncharacterized_G1RQQ4"/>
        <gene id="23391" protId="G1QNA1" geneId="LOC100605448"/>
        <gene id="23393" protId="G1QX75" geneId="LOC100586833"/>
        <gene id="23395" protId="G1S242" geneId="LOC100579184"/>
        <gene id="23397" protId="G1RX38" geneId="uncharacterized_G1RX38"/>
        <gene id="23398" protId="M3ZAB7" geneId="TRAV36DV7"/>
        <gene id="23403" protId="G1QTK0" geneId="LOC100585330"/>
        <gene id="23405" protId="G1RHM2" geneId="uncharacterized_G1RHM2"/>
        <gene id="23407" protId="G1RX57" geneId="uncharacterized_G1RX57"/>
        <gene id="23423" protId="G1SBE0" geneId="LOC100594907"/>
        <gene id="23424" protId="G1SBE3" geneId="LOC100595932"/>
        <gene id="23425" protId="G1SBE5" geneId="LOC100596946"/>
        <gene id="23426" protId="G1SBE6" geneId="LOC100597288"/>
        <gene id="23427" protId="G1SBE4" geneId="LOC100596272"/>
        <gene id="23428" protId="G1SBE2" geneId="LOC100595585"/>
        <gene id="23429" protId="G1S6V6" geneId="LOC100597620"/>
        <gene id="23430" protId="G1SBE1" geneId="LOC100595254"/>
        <gene id="23431" protId="G1SBE7" geneId="LOC100598653"/>
        <gene id="23432" protId="G1SBE8" geneId="LOC100598986"/>
        <gene id="23433" protId="G1QXN1" geneId="LOC100589606"/>
        <gene id="23435" protId="G1REF5" geneId="LOC100586957"/>
        <gene id="23437" protId="G1S9W5" geneId="LOC100588671"/>
        <gene id="23439" protId="G1S7I1" geneId="LOC100603580"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="N.leucogenys" link="http://www.uniprot.org/taxonomy/61853"/>
    </notes>
  </species>
  <species name="Xiphophorus maculatus " NCBITaxId="8083">
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        <gene id="4379" protId="M3ZX89" geneId="uncharacterized_M3ZX89"/>
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        <gene id="4392" protId="M3ZYS8" geneId="CCT6A"/>
        <gene id="4394" protId="M4A5H4" geneId="uncharacterized_M4A5H4"/>
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        <gene id="4398" protId="M4AST5" geneId="UBAP2 (2 of 2)"/>
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        <gene id="15037" protId="M4ACB4" geneId="uncharacterized_M4ACB4"/>
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        <gene id="15045" protId="M4A9X2" geneId="uncharacterized_M4A9X2"/>
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    <notes>
      <additionalInformation abbreviation="X.maculatus" link="http://www.uniprot.org/taxonomy/8083"/>
    </notes>
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