<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="328" inparalogs="865"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Naegleria gruberi " NCBITaxId="5762">
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    <notes>
      <additionalInformation abbreviation="N.gruberi" link="http://www.uniprot.org/taxonomy/5762"/>
    </notes>
  </species>
  <species name="Thermodesulfovibrio yellowstonii " NCBITaxId="289376">
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    <notes>
      <additionalInformation abbreviation="T.yellowstonii" link="http://www.uniprot.org/taxonomy/289376"/>
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