<?xml version="1.0" encoding="utf-8"?>
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  <notes>
    <stats ortholog_groups="374" inparalogs="1047"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai " NCBITaxId="189518">
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        <gene id="809" protId="Q8F8J6" geneId="LA_0559"/>
        <gene id="811" protId="Q8F0N0" geneId="LA_3462"/>
        <gene id="812" protId="Q8F9H1" geneId="LA_0224"/>
        <gene id="815" protId="Q8F9Q3" geneId="LA_0138"/>
        <gene id="817" protId="Q8F9Q0" geneId="LA_0141"/>
        <gene id="818" protId="Q8F6T1" geneId="LA_1220"/>
        <gene id="819" protId="Q8F4C3" geneId="LA_2118"/>
        <gene id="821" protId="Q8EZG6" geneId="pgi"/>
        <gene id="823" protId="Q8F3W3" geneId="tal"/>
        <gene id="825" protId="Q8EZW0" geneId="LA_3741"/>
        <gene id="827" protId="Q8F5L8" geneId="rfbD"/>
        <gene id="829" protId="Q8F392" geneId="xthA"/>
        <gene id="831" protId="Q8CXT5" geneId="miaA"/>
        <gene id="833" protId="Q8F0U0" geneId="pqqL"/>
        <gene id="837" protId="Q8CXU2" geneId="spoU"/>
        <gene id="839" protId="Q8F3Y0" geneId="nifS"/>
        <gene id="841" protId="Q8F8N2" geneId="truD"/>
        <gene id="844" protId="Q8F5F1" geneId="lipB"/>
        <gene id="846" protId="Q8F2J1" geneId="atpH"/>
        <gene id="848" protId="P61437" geneId="groS"/>
        <gene id="850" protId="Q8F360" geneId="LA_2551"/>
        <gene id="856" protId="Q8EYD0" geneId="LA_4286"/>
        <gene id="859" protId="Q8F1Y2" geneId="eutG"/>
        <gene id="861" protId="Q9XD08" geneId="rplQ"/>
        <gene id="863" protId="Q9XD29" geneId="rplP"/>
        <gene id="865" protId="Q8F4K6" geneId="LA_2034"/>
        <gene id="866" protId="Q8F025" geneId="LA_3672"/>
        <gene id="872" protId="Q8F2B7" geneId="LA_2857"/>
        <gene id="874" protId="Q8EXA3" geneId="speE2"/>
        <gene id="876" protId="Q8F031" geneId="LA_3666"/>
        <gene id="878" protId="Q8F965" geneId="LA_0332"/>
        <gene id="880" protId="P61445" geneId="grpE"/>
        <gene id="883" protId="Q8EY58" geneId="ilvE"/>
        <gene id="886" protId="Q8EXP5" geneId="LB_163"/>
        <gene id="890" protId="Q8F2Q9" geneId="LA_2709"/>
        <gene id="892" protId="Q8F2G8" geneId="LA_2803"/>
        <gene id="895" protId="Q8CXT0" geneId="LA_2144"/>
        <gene id="898" protId="Q8F339" geneId="pilF"/>
        <gene id="900" protId="Q8F6H4" geneId="LA_1332"/>
        <gene id="906" protId="Q8EZZ2" geneId="mviM"/>
        <gene id="907" protId="Q8F5P1" geneId="LA_1626"/>
        <gene id="909" protId="Q8F235" geneId="LA_2942"/>
        <gene id="925" protId="Q8F1U9" geneId="LA_3029"/>
        <gene id="929" protId="Q8F7A1" geneId="lysA"/>
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        <gene id="935" protId="Q8F8W6" geneId="LA_0433"/>
        <gene id="937" protId="Q8F0T3" geneId="rpsI"/>
        <gene id="939" protId="Q8F438" geneId="sua5"/>
        <gene id="941" protId="Q8F5J7" geneId="ybeY"/>
        <gene id="943" protId="Q8EYX0" geneId="LA_4093"/>
        <gene id="945" protId="Q8F7Y6" geneId="tmk"/>
        <gene id="947" protId="Q8F4W8" geneId="LA_1920"/>
        <gene id="949" protId="Q8EZV4" geneId="thrC"/>
        <gene id="953" protId="Q8F0D6" geneId="iscU"/>
        <gene id="955" protId="Q8F6B6" geneId="rbsK"/>
        <gene id="957" protId="Q8EZU3" geneId="LA_3758"/>
        <gene id="960" protId="Q9XD12" geneId="rpsM"/>
        <gene id="963" protId="Q8F061" geneId="pyrC"/>
        <gene id="970" protId="Q8F715" geneId="LA_1133"/>
        <gene id="972" protId="Q8F692" geneId="LA_1417"/>
        <gene id="974" protId="Q8F622" geneId="rluA"/>
        <gene id="977" protId="Q8F0I0" geneId="purC"/>
        <gene id="979" protId="Q8F7W0" geneId="birA"/>
        <gene id="981" protId="Q8F681" geneId="ptc1"/>
        <gene id="989" protId="Q9XD37" geneId="rpsJ"/>
        <gene id="991" protId="Q8CXR8" geneId="LA_3485"/>
        <gene id="995" protId="P52277" geneId="recA"/>
        <gene id="999" protId="Q8F3T6" geneId="LA_2314"/>
        <gene id="1000" protId="Q8EXK4" geneId="LB_204"/>
        <gene id="1002" protId="Q8EXY9" geneId="ole1"/>
        <gene id="1005" protId="Q8F717" geneId="pcm"/>
        <gene id="1008" protId="Q8F9V7" geneId="LA_0080"/>
        <gene id="1010" protId="Q8F1D2" geneId="LA_3205"/>
        <gene id="1012" protId="Q8EXN4" geneId="htpX"/>
        <gene id="1014" protId="Q8F9Q1" geneId="trmB"/>
        <gene id="1016" protId="Q8EZ79" geneId="LA_3977"/>
        <gene id="1019" protId="Q8F4J7" geneId="hit"/>
        <gene id="1022" protId="Q8F2U4" geneId="abgB"/>
        <gene id="1024" protId="Q8F3L1" geneId="rpsP"/>
        <gene id="1026" protId="Q8F4C9" geneId="bolA"/>
        <gene id="1029" protId="Q8EX79" geneId="LB_335"/>
        <gene id="1032" protId="Q8F5K4" geneId="rpsR"/>
        <gene id="1034" protId="Q8F2J6" geneId="atpC"/>
        <gene id="1036" protId="Q8EZ67" geneId="LA_3991"/>
        <gene id="1039" protId="Q9XD22" geneId="rpsH"/>
        <gene id="1044" protId="Q8F355" geneId="LA_2556"/>
        <gene id="1046" protId="Q8F6T9" geneId="LA_1210"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="L.interrogans" link="http://www.uniprot.org/taxonomy/189518"/>
    </notes>
  </species>
  <species name="Pteropus alecto " NCBITaxId="9402">
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    </database>
    <notes>
      <additionalInformation abbreviation="P.alecto" link="http://www.uniprot.org/taxonomy/9402"/>
    </notes>
  </species>
  <scores>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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