<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="319" inparalogs="882"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Korarchaeum cryptofilum " NCBITaxId="374847">
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        <gene id="726" protId="B1L6F6" geneId="Kcr_1289"/>
        <gene id="728" protId="B1L738" geneId="rpl30e"/>
        <gene id="730" protId="B1L7F1" geneId="Kcr_0018"/>
        <gene id="765" protId="B1L6Z6" geneId="Kcr_1479"/>
        <gene id="768" protId="B1L6W1" geneId="Kcr_1444"/>
        <gene id="770" protId="B1L5E3" geneId="Kcr_0926"/>
        <gene id="772" protId="B1L5D9" geneId="lysA"/>
        <gene id="774" protId="B1L689" geneId="Kcr_1222"/>
        <gene id="777" protId="B1L5N2" geneId="Kcr_1015"/>
        <gene id="779" protId="B1L715" geneId="Kcr_1498"/>
        <gene id="781" protId="B1L662" geneId="proS"/>
        <gene id="783" protId="B1L6N5" geneId="rpl37ae"/>
        <gene id="785" protId="B1L3J9" geneId="Kcr_0268"/>
        <gene id="787" protId="B1L7Q3" geneId="Kcr_0120"/>
        <gene id="789" protId="B1L372" geneId="Kcr_0141"/>
        <gene id="791" protId="B1L6E8" geneId="Kcr_1281"/>
        <gene id="793" protId="B1L5S1" geneId="Kcr_1054"/>
        <gene id="796" protId="B1L5N5" geneId="rps28e"/>
        <gene id="798" protId="B1L6P7" geneId="rps3ae"/>
        <gene id="800" protId="B1L3V7" geneId="Kcr_0380"/>
        <gene id="802" protId="B1L3H1" geneId="pyrD"/>
        <gene id="804" protId="B1L787" geneId="rpl30p"/>
        <gene id="806" protId="B1L4D6" geneId="Kcr_0562"/>
        <gene id="807" protId="B1L5F2" geneId="Kcr_0935"/>
        <gene id="809" protId="B1L382" geneId="Kcr_0151"/>
        <gene id="811" protId="B1L5U2" geneId="gltX"/>
        <gene id="813" protId="B1L6D3" geneId="Kcr_1266"/>
        <gene id="814" protId="B1L3D6" geneId="Kcr_0205"/>
        <gene id="816" protId="B1L7K7" geneId="Kcr_0074"/>
        <gene id="818" protId="B1L6S2" geneId="Kcr_1405"/>
        <gene id="820" protId="B1L5J3" geneId="Kcr_0976"/>
        <gene id="823" protId="B1L642" geneId="Kcr_1175"/>
        <gene id="825" protId="B1L4N4" geneId="Kcr_0661"/>
        <gene id="827" protId="B1L751" geneId="rps27e"/>
        <gene id="829" protId="B1L734" geneId="Kcr_1517"/>
        <gene id="832" protId="B1L7C6" geneId="Kcr_1610"/>
        <gene id="834" protId="B1L791" geneId="rpl34e"/>
        <gene id="836" protId="B1L6D4" geneId="Kcr_1267"/>
        <gene id="838" protId="B1L4B3" geneId="Kcr_0539"/>
        <gene id="839" protId="B1L4M7" geneId="Kcr_0653"/>
        <gene id="841" protId="B1L6E7" geneId="Kcr_1280"/>
        <gene id="856" protId="B1L4G6" geneId="Kcr_0592"/>
        <gene id="859" protId="B1L4I3" geneId="Kcr_0609"/>
        <gene id="860" protId="B1L3A8" geneId="Kcr_0177"/>
        <gene id="862" protId="B1L512" geneId="Kcr_0794"/>
        <gene id="864" protId="B1L6U1" geneId="Kcr_1424"/>
        <gene id="866" protId="B1L7Q7" geneId="rpoL"/>
        <gene id="868" protId="B1L6Y5" geneId="tpiA"/>
        <gene id="870" protId="B1L780" geneId="rps14"/>
        <gene id="872" protId="B1L7M4" geneId="Kcr_0091"/>
        <gene id="874" protId="B1L7D1" geneId="Kcr_1615"/>
        <gene id="878" protId="B1L3Q2" geneId="Kcr_0323"/>
        <gene id="879" protId="B1L383" geneId="Kcr_0152"/>
        <gene id="881" protId="B1L4W4" geneId="Kcr_0745"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="K.cryptofilum" link="http://www.uniprot.org/taxonomy/374847"/>
    </notes>
  </species>
  <species name="Tribolium castaneum " NCBITaxId="7070">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="4" protId="D6WRF4" geneId="TcasGA2_TC009471"/>
        <gene id="7" protId="D6WTD3" geneId="TER94"/>
        <gene id="9" protId="D6WDY5" geneId="TcasGA2_TC010519"/>
        <gene id="11" protId="D6W7S2" geneId="TcasGA2_TC010772"/>
        <gene id="13" protId="D2A198" geneId="NtpA"/>
        <gene id="15" protId="D6X1R1" geneId="TcasGA2_TC012133"/>
        <gene id="17" protId="D6X2M2" geneId="TcasGA2_TC010635"/>
        <gene id="19" protId="D6WRR0" geneId="TcasGA2_TC008784"/>
        <gene id="20" protId="D6WUJ3" geneId="TcasGA2_TC006019"/>
        <gene id="22" protId="D2A1C9" geneId="GLEAN_08372"/>
        <gene id="24" protId="D6WKQ3" geneId="TcasGA2_TC010452"/>
        <gene id="25" protId="D7EJP0" geneId="TcasGA2_TC001880"/>
        <gene id="27" protId="D6WTN3" geneId="TcasGA2_TC008604"/>
        <gene id="29" protId="D6WVS3" geneId="TcasGA2_TC006271"/>
        <gene id="30" protId="D1ZZZ1" geneId="GLEAN_07374"/>
        <gene id="32" protId="D1ZZJ4" geneId="GLEAN_07444"/>
        <gene id="34" protId="D6X1X8" geneId="TcasGA2_TC012373"/>
        <gene id="36" protId="D6WSI2" geneId="TcasGA2_TC009571"/>
        <gene id="38" protId="D6X0K0" geneId="pont"/>
        <gene id="40" protId="D6WU61" geneId="TcasGA2_TC009707"/>
        <gene id="42" protId="D6WRF8" geneId="TcasGA2_TC009342"/>
        <gene id="44" protId="D6X009" geneId="TcasGA2_TC012754"/>
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        <gene id="46" protId="D6X018" geneId="TcasGA2_TC011729"/>
        <gene id="48" protId="D6WBZ5" geneId="TcasGA2_TC005004"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="T.castaneum" link="http://www.uniprot.org/taxonomy/7070"/>
    </notes>
  </species>
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    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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