<?xml version="1.0" encoding="utf-8"?>
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  <notes>
    <stats ortholog_groups="5096" inparalogs="13734"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Drosophila willistoni " NCBITaxId="7260">
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        <gene id="13699" protId="B4NLG8" geneId="DwilGK14100"/>
        <gene id="13703" protId="B4NI95" geneId="DwilGK13551"/>
        <gene id="13706" protId="B4NB48" geneId="DwilGK11830"/>
        <gene id="13708" protId="B4MVR6" geneId="DwilGK15008"/>
        <gene id="13710" protId="B4MT06" geneId="DwilGK19795"/>
        <gene id="13712" protId="B4NLE2" geneId="DwilGK18971"/>
        <gene id="13715" protId="B4NDN7" geneId="DwilGK25483"/>
        <gene id="13719" protId="B4NIY7" geneId="DwilGK14364"/>
        <gene id="13722" protId="B4MYA6" geneId="DwilGK22110"/>
        <gene id="13723" protId="B4MYA7" geneId="DwilGK22109"/>
        <gene id="13725" protId="B4NH70" geneId="DwilGK13067"/>
        <gene id="13727" protId="B4NB86" geneId="DwilGK11849"/>
        <gene id="13729" protId="B4MQD3" geneId="DwilGK21439"/>
        <gene id="13732" protId="B4MMG7" geneId="DwilGK16720"/>
        <gene id="13733" protId="B4MMG8" geneId="DwilGK16719"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="D.willistoni" link="http://www.uniprot.org/taxonomy/7260"/>
    </notes>
  </species>
  <species name="Latimeria chalumnae PE=4 SV=1" NCBITaxId="7897">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="8" protId="H3AQI5" geneId="PRPF8"/>
        <gene id="10" protId="H3BAL0" geneId="DNAH10"/>
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        <gene id="13" protId="H3AR56" geneId="uncharacterized_H3AR56"/>
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        <gene id="37" protId="H3AU29" geneId="CAD"/>
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        <gene id="93" protId="H3AQ68" geneId="uncharacterized_H3AQ68"/>
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        <gene id="207" protId="H3BA65" geneId="uncharacterized_H3BA65"/>
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        <gene id="211" protId="H3BFU0" geneId="KIAA0664"/>
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        <gene id="220" protId="H3AV84" geneId="uncharacterized_H3AV84"/>
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        <gene id="233" protId="H2ZU49" geneId="uncharacterized_H2ZU49"/>
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        <gene id="241" protId="M3XK40" geneId="CREBBP"/>
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        <gene id="252" protId="H3AZ70" geneId="uncharacterized_H3AZ70"/>
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        <gene id="263" protId="H2ZZM6" geneId="uncharacterized_H2ZZM6"/>
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        <gene id="465" protId="H3A831" geneId="uncharacterized_H3A831"/>
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        <gene id="468" protId="H2ZV91" geneId="uncharacterized_H2ZV91"/>
        <gene id="469" protId="H3AB35" geneId="uncharacterized_H3AB35"/>
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        <gene id="13480" protId="H3AJX3" geneId="SHCBP1"/>
        <gene id="13481" protId="H3BEN5" geneId="SHCBP1L"/>
        <gene id="13483" protId="H3B3E3" geneId="uncharacterized_H3B3E3"/>
        <gene id="13484" protId="H3AV66" geneId="RASSF9"/>
        <gene id="13486" protId="H3AVQ5" geneId="MCFD2"/>
        <gene id="13487" protId="H3BDN8" geneId="uncharacterized_H3BDN8"/>
        <gene id="13489" protId="H3A896" geneId="SPTSSB"/>
        <gene id="13491" protId="H3AB00" geneId="uncharacterized_H3AB00"/>
        <gene id="13493" protId="M3XKC9" geneId="WRB"/>
        <gene id="13495" protId="H3B7Q8" geneId="C1orf27"/>
        <gene id="13497" protId="H3B3C6" geneId="ATXN10"/>
        <gene id="13499" protId="H3AUF9" geneId="uncharacterized_H3AUF9"/>
        <gene id="13500" protId="H3ADD3" geneId="GNG7"/>
        <gene id="13501" protId="H2ZSM5" geneId="GNG12"/>
        <gene id="13502" protId="H3B8Z9" geneId="GNG2"/>
        <gene id="13503" protId="H3AJE3" geneId="GNG8"/>
        <gene id="13504" protId="H3BDM5" geneId="GNG3"/>
        <gene id="13506" protId="H3A1L5" geneId="CDHR4"/>
        <gene id="13507" protId="H3BGE1" geneId="uncharacterized_H3BGE1"/>
        <gene id="13508" protId="H3A511" geneId="CDHR3"/>
        <gene id="13510" protId="H3A0H1" geneId="TCN2"/>
        <gene id="13511" protId="H3A2D4" geneId="uncharacterized_H3A2D4"/>
        <gene id="13513" protId="H3A3W8" geneId="uncharacterized_H3A3W8"/>
        <gene id="13515" protId="H3AXA3" geneId="uncharacterized_H3AXA3"/>
        <gene id="13517" protId="H3AXY6" geneId="SH3PXD2A"/>
        <gene id="13518" protId="H3ATU8" geneId="SH3PXD2B"/>
        <gene id="13520" protId="H2ZSA2" geneId="DCTN3"/>
        <gene id="13522" protId="H3ABA5" geneId="BLOC1S4"/>
        <gene id="13524" protId="H3BE36" geneId="C19orf54"/>
        <gene id="13526" protId="H2ZWX3" geneId="uncharacterized_H2ZWX3"/>
        <gene id="13527" protId="H3AV30" geneId="uncharacterized_H3AV30"/>
        <gene id="13528" protId="H2ZRY8" geneId="uncharacterized_H2ZRY8"/>
        <gene id="13529" protId="H3AXS5" geneId="uncharacterized_H3AXS5"/>
        <gene id="13530" protId="H3BF20" geneId="uncharacterized_H3BF20"/>
        <gene id="13531" protId="H3A3J9" geneId="uncharacterized_H3A3J9"/>
        <gene id="13532" protId="H3B0C5" geneId="uncharacterized_H3B0C5"/>
        <gene id="13533" protId="H3AWN5" geneId="uncharacterized_H3AWN5"/>
        <gene id="13534" protId="H2ZW08" geneId="uncharacterized_H2ZW08"/>
        <gene id="13535" protId="H2ZYB3" geneId="uncharacterized_H2ZYB3"/>
        <gene id="13536" protId="H3B304" geneId="uncharacterized_H3B304"/>
        <gene id="13537" protId="H3AI42" geneId="uncharacterized_H3AI42"/>
        <gene id="13538" protId="H3A6M0" geneId="uncharacterized_H3A6M0"/>
        <gene id="13539" protId="H3A5L3" geneId="uncharacterized_H3A5L3"/>
        <gene id="13540" protId="H3ADV5" geneId="uncharacterized_H3ADV5"/>
        <gene id="13541" protId="H3A5B7" geneId="uncharacterized_H3A5B7"/>
        <gene id="13542" protId="H3A3K2" geneId="uncharacterized_H3A3K2"/>
        <gene id="13543" protId="H3AUZ3" geneId="uncharacterized_H3AUZ3"/>
        <gene id="13547" protId="H3AL42" geneId="uncharacterized_H3AL42"/>
        <gene id="13548" protId="H3B479" geneId="uncharacterized_H3B479"/>
        <gene id="13549" protId="H3ABJ9" geneId="uncharacterized_H3ABJ9"/>
        <gene id="13550" protId="H3AQ47" geneId="uncharacterized_H3AQ47"/>
        <gene id="13551" protId="H3B9I2" geneId="uncharacterized_H3B9I2"/>
        <gene id="13552" protId="H3AF97" geneId="uncharacterized_H3AF97"/>
        <gene id="13554" protId="H3B2L7" geneId="uncharacterized_H3B2L7"/>
        <gene id="13555" protId="H2ZWU1" geneId="uncharacterized_H2ZWU1"/>
        <gene id="13556" protId="H3B4U9" geneId="CYGB"/>
        <gene id="13557" protId="P23741" geneId="HBB"/>
        <gene id="13558" protId="H3ABR1" geneId="HBZ"/>
        <gene id="13560" protId="H3AG33" geneId="FAM107B"/>
        <gene id="13561" protId="H3AU22" geneId="FAM107A"/>
        <gene id="13562" protId="H3AQ02" geneId="uncharacterized_H3AQ02"/>
        <gene id="13563" protId="H3AUT6" geneId="uncharacterized_H3AUT6"/>
        <gene id="13565" protId="M3XLF3" geneId="TCTN1"/>
        <gene id="13566" protId="H3AKU2" geneId="TCTN3"/>
        <gene id="13568" protId="H3A9C8" geneId="NHEJ1"/>
        <gene id="13570" protId="H3A7V6" geneId="CEBPG"/>
        <gene id="13572" protId="H3BDJ2" geneId="TMEM230"/>
        <gene id="13574" protId="H3B7K4" geneId="THAP3"/>
        <gene id="13575" protId="H3A2K5" geneId="uncharacterized_H3A2K5"/>
        <gene id="13576" protId="H2ZSE9" geneId="uncharacterized_H2ZSE9"/>
        <gene id="13577" protId="M3XKR1" geneId="THAP6"/>
        <gene id="13578" protId="H3A877" geneId="uncharacterized_H3A877"/>
        <gene id="13581" protId="H3BBF5" geneId="FADS1"/>
        <gene id="13582" protId="H3BBT6" geneId="uncharacterized_H3BBT6"/>
        <gene id="13584" protId="H3AZ92" geneId="MRPS34"/>
        <gene id="13586" protId="H3AFS0" geneId="C1D"/>
        <gene id="13588" protId="M3XKY7" geneId="MZT1"/>
        <gene id="13591" protId="H3B8S5" geneId="BAK1"/>
        <gene id="13592" protId="H3ANS8" geneId="BCL2L1"/>
        <gene id="13593" protId="H3ASQ4" geneId="uncharacterized_H3ASQ4"/>
        <gene id="13597" protId="H3AL74" geneId="CLEC11A"/>
        <gene id="13599" protId="H2ZWK2" geneId="DZIP1L"/>
        <gene id="13600" protId="H3A9Y0" geneId="DZIP1"/>
        <gene id="13602" protId="H3B714" geneId="LSM11"/>
        <gene id="13604" protId="H3AJY0" geneId="MRPL53"/>
        <gene id="13606" protId="H3AJF1" geneId="uncharacterized_H3AJF1"/>
        <gene id="13608" protId="M3XHQ4" geneId="PFN4"/>
        <gene id="13611" protId="H3AKN8" geneId="uncharacterized_H3AKN8"/>
        <gene id="13612" protId="H3AWE1" geneId="uncharacterized_H3AWE1"/>
        <gene id="13613" protId="H3AB42" geneId="uncharacterized_H3AB42"/>
        <gene id="13614" protId="H3B757" geneId="uncharacterized_H3B757"/>
        <gene id="13615" protId="H3BAS8" geneId="uncharacterized_H3BAS8"/>
        <gene id="13616" protId="H3AQV0" geneId="uncharacterized_H3AQV0"/>
        <gene id="13617" protId="H3AUX7" geneId="uncharacterized_H3AUX7"/>
        <gene id="13618" protId="H3A4Q9" geneId="uncharacterized_H3A4Q9"/>
        <gene id="13619" protId="H3ACT8" geneId="uncharacterized_H3ACT8"/>
        <gene id="13620" protId="H3B9H4" geneId="uncharacterized_H3B9H4"/>
        <gene id="13621" protId="H3AE19" geneId="uncharacterized_H3AE19"/>
        <gene id="13622" protId="H3B9N4" geneId="uncharacterized_H3B9N4"/>
        <gene id="13624" protId="H3AGH2" geneId="uncharacterized_H3AGH2"/>
        <gene id="13625" protId="H3AXK2" geneId="NDNF"/>
        <gene id="13626" protId="H3BBP7" geneId="uncharacterized_H3BBP7"/>
        <gene id="13628" protId="H3AMZ8" geneId="uncharacterized_H3AMZ8"/>
        <gene id="13629" protId="H3AE94" geneId="uncharacterized_H3AE94"/>
        <gene id="13630" protId="H2ZUM7" geneId="uncharacterized_H2ZUM7"/>
        <gene id="13631" protId="M3XK74" geneId="PGBD4"/>
        <gene id="13633" protId="H3B0D6" geneId="uncharacterized_H3B0D6"/>
        <gene id="13634" protId="H3BGK3" geneId="uncharacterized_H3BGK3"/>
        <gene id="13636" protId="H3AA00" geneId="ARL6IP6"/>
        <gene id="13638" protId="H3AAF9" geneId="HN1L"/>
        <gene id="13640" protId="H3AD12" geneId="ELP6"/>
        <gene id="13642" protId="H3B5R7" geneId="MRP63"/>
        <gene id="13644" protId="M3XJJ6" geneId="MRPL33"/>
        <gene id="13647" protId="H3B4R5" geneId="MYOG"/>
        <gene id="13648" protId="H3ARC3" geneId="MYF6"/>
        <gene id="13649" protId="H3B3V9" geneId="uncharacterized_H3B3V9"/>
        <gene id="13651" protId="H3BH22" geneId="uncharacterized_H3BH22"/>
        <gene id="13654" protId="H3A195" geneId="uncharacterized_H3A195"/>
        <gene id="13655" protId="H3A6C4" geneId="CD200"/>
        <gene id="13656" protId="H2ZWQ4" geneId="uncharacterized_H2ZWQ4"/>
        <gene id="13657" protId="H3A2X0" geneId="uncharacterized_H3A2X0"/>
        <gene id="13658" protId="H2ZZM1" geneId="uncharacterized_H2ZZM1"/>
        <gene id="13659" protId="M3XJK0" geneId="uncharacterized_M3XJK0"/>
        <gene id="13661" protId="H3ACK5" geneId="C19orf40"/>
        <gene id="13663" protId="H3BEU6" geneId="ATOX1"/>
        <gene id="13665" protId="H3B0Y0" geneId="uncharacterized_H3B0Y0"/>
        <gene id="13667" protId="M3XKZ9" geneId="MIEN1"/>
        <gene id="13680" protId="H3ADH4" geneId="OPCML"/>
        <gene id="13681" protId="H3AVH0" geneId="uncharacterized_H3AVH0"/>
        <gene id="13682" protId="H2ZXL9" geneId="NTM"/>
        <gene id="13683" protId="H3A898" geneId="LSAMP"/>
        <gene id="13684" protId="H3AJI8" geneId="NEGR1"/>
        <gene id="13685" protId="H3AMW1" geneId="uncharacterized_H3AMW1"/>
        <gene id="13686" protId="H3A2G4" geneId="uncharacterized_H3A2G4"/>
        <gene id="13687" protId="H2ZU89" geneId="uncharacterized_H2ZU89"/>
        <gene id="13688" protId="H3AL77" geneId="uncharacterized_H3AL77"/>
        <gene id="13689" protId="H3AE85" geneId="uncharacterized_H3AE85"/>
        <gene id="13690" protId="H2ZSV7" geneId="uncharacterized_H2ZSV7"/>
        <gene id="13694" protId="H3BIS5" geneId="uncharacterized_H3BIS5"/>
        <gene id="13696" protId="H3BGP6" geneId="uncharacterized_H3BGP6"/>
        <gene id="13697" protId="H3ABK4" geneId="GREM1"/>
        <gene id="13698" protId="H3B020" geneId="GREM2"/>
        <gene id="13700" protId="M3XJ09" geneId="COX7A2"/>
        <gene id="13701" protId="H3AAH4" geneId="uncharacterized_H3AAH4"/>
        <gene id="13702" protId="H3B550" geneId="uncharacterized_H3B550"/>
        <gene id="13704" protId="H3A1T2" geneId="PPP1R27"/>
        <gene id="13705" protId="H3A6B5" geneId="NRARP"/>
        <gene id="13707" protId="H3A6T7" geneId="PSMG2"/>
        <gene id="13709" protId="H3AZT8" geneId="TSEN34"/>
        <gene id="13711" protId="H3BGD9" geneId="LAMTOR5"/>
        <gene id="13713" protId="H3B3U2" geneId="uncharacterized_H3B3U2"/>
        <gene id="13714" protId="H3AK12" geneId="uncharacterized_H3AK12"/>
        <gene id="13716" protId="M3XIY3" geneId="uncharacterized_M3XIY3"/>
        <gene id="13717" protId="H2ZW19" geneId="uncharacterized_H2ZW19"/>
        <gene id="13718" protId="H3ACM3" geneId="uncharacterized_H3ACM3"/>
        <gene id="13720" protId="H2ZU81" geneId="uncharacterized_H2ZU81"/>
        <gene id="13721" protId="H3AIP3" geneId="uncharacterized_H3AIP3"/>
        <gene id="13724" protId="H3ATL6" geneId="C1orf212"/>
        <gene id="13726" protId="H3A9I8" geneId="PIGH"/>
        <gene id="13728" protId="H3ACJ2" geneId="SCG5"/>
        <gene id="13730" protId="H3AG39" geneId="uncharacterized_H3AG39"/>
        <gene id="13731" protId="H3AG38" geneId="uncharacterized_H3AG38"/>
        <gene id="13734" protId="H3BA68" geneId="uncharacterized_H3BA68"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="L.chalumnae" link="http://www.uniprot.org/taxonomy/7897"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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      <score id="bit" value="4952"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.122"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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