<?xml version="1.0" encoding="utf-8"?>
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  <notes>
    <stats ortholog_groups="81" inparalogs="257"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="C.trachomatis" link="http://www.uniprot.org/taxonomy/272561"/>
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      <additionalInformation abbreviation="E.bieneusi" link="http://www.uniprot.org/taxonomy/481877"/>
    </notes>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
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    <orthologGroup id="3">
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="17">
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        <score id="bootstrap" value="1"/>
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