<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="1306" inparalogs="3149"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Ciona savignyi " NCBITaxId="51511">
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        <gene id="3021" protId="H2YWD4" geneId="uncharacterized_H2YWD4"/>
        <gene id="3023" protId="H2Y6P0" geneId="Csa.7958"/>
        <gene id="3025" protId="H2Z208" geneId="uncharacterized_H2Z208"/>
        <gene id="3027" protId="H2ZFX6" geneId="uncharacterized_H2ZFX6"/>
        <gene id="3029" protId="H2YY22" geneId="uncharacterized_H2YY22"/>
        <gene id="3031" protId="H2Y3V4" geneId="uncharacterized_H2Y3V4"/>
        <gene id="3033" protId="H2YA28" geneId="uncharacterized_H2YA28"/>
        <gene id="3035" protId="H2YKH4" geneId="Csa.10457"/>
        <gene id="3037" protId="H2Z6G1" geneId="Csa.4901"/>
        <gene id="3039" protId="H2YY59" geneId="Csa.5067"/>
        <gene id="3041" protId="H2Z4W5" geneId="Csa.4296"/>
        <gene id="3043" protId="H2YNL4" geneId="Csa.8309"/>
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        <gene id="3047" protId="H2Y9C3" geneId="Csa.9650"/>
        <gene id="3048" protId="H2ZJ95" geneId="uncharacterized_H2ZJ95"/>
        <gene id="3049" protId="H2ZBU8" geneId="Csa.10473"/>
        <gene id="3051" protId="H2ZK19" geneId="uncharacterized_H2ZK19"/>
        <gene id="3054" protId="H2YJL4" geneId="uncharacterized_H2YJL4"/>
        <gene id="3056" protId="H2YY21" geneId="uncharacterized_H2YY21"/>
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        <gene id="3060" protId="H2YQA9" geneId="uncharacterized_H2YQA9"/>
        <gene id="3062" protId="H2ZJX9" geneId="uncharacterized_H2ZJX9"/>
        <gene id="3065" protId="H2YJ01" geneId="Csa.3101"/>
        <gene id="3067" protId="H2YI67" geneId="Csa.10370"/>
        <gene id="3068" protId="H2Y680" geneId="Csa.5848"/>
        <gene id="3070" protId="H2YJR8" geneId="Csa.8347"/>
        <gene id="3072" protId="H2ZPM6" geneId="Csa.825"/>
        <gene id="3074" protId="H2YE10" geneId="Csa.10258"/>
        <gene id="3076" protId="H2YCK0" geneId="uncharacterized_H2YCK0"/>
        <gene id="3077" protId="H2ZH56" geneId="uncharacterized_H2ZH56"/>
        <gene id="3078" protId="H2ZFC0" geneId="uncharacterized_H2ZFC0"/>
        <gene id="3079" protId="H2Z7E4" geneId="uncharacterized_H2Z7E4"/>
        <gene id="3080" protId="H2Y759" geneId="uncharacterized_H2Y759"/>
        <gene id="3081" protId="H2ZM40" geneId="uncharacterized_H2ZM40"/>
        <gene id="3082" protId="H2YEC2" geneId="uncharacterized_H2YEC2"/>
        <gene id="3083" protId="H2YR62" geneId="uncharacterized_H2YR62"/>
        <gene id="3084" protId="H2ZI43" geneId="uncharacterized_H2ZI43"/>
        <gene id="3085" protId="H2ZFA5" geneId="uncharacterized_H2ZFA5"/>
        <gene id="3086" protId="H2Y6H2" geneId="uncharacterized_H2Y6H2"/>
        <gene id="3087" protId="H2YRM7" geneId="Csa.1058"/>
        <gene id="3088" protId="H2Z1A6" geneId="uncharacterized_H2Z1A6"/>
        <gene id="3089" protId="H2ZDL6" geneId="uncharacterized_H2ZDL6"/>
        <gene id="3090" protId="H2Z1L6" geneId="uncharacterized_H2Z1L6"/>
        <gene id="3091" protId="H2YXE0" geneId="Csa.9363"/>
        <gene id="3092" protId="H2Z1Q8" geneId="Csa.1460"/>
        <gene id="3093" protId="H2Y7A9" geneId="uncharacterized_H2Y7A9"/>
        <gene id="3094" protId="H2YM41" geneId="uncharacterized_H2YM41"/>
        <gene id="3095" protId="H2YQJ0" geneId="uncharacterized_H2YQJ0"/>
        <gene id="3096" protId="H2YE43" geneId="uncharacterized_H2YE43"/>
        <gene id="3097" protId="H2ZJZ9" geneId="uncharacterized_H2ZJZ9"/>
        <gene id="3098" protId="H2YGF8" geneId="Csa.1932"/>
        <gene id="3099" protId="H2Z287" geneId="uncharacterized_H2Z287"/>
        <gene id="3100" protId="H2Z6I8" geneId="Csa.2689"/>
        <gene id="3102" protId="H2ZJN9" geneId="Csa.129"/>
        <gene id="3109" protId="H2ZHQ2" geneId="uncharacterized_H2ZHQ2"/>
        <gene id="3110" protId="H2ZHQ0" geneId="uncharacterized_H2ZHQ0"/>
        <gene id="3111" protId="H2ZI22" geneId="uncharacterized_H2ZI22"/>
        <gene id="3112" protId="H2YVL2" geneId="uncharacterized_H2YVL2"/>
        <gene id="3114" protId="H2ZC70" geneId="uncharacterized_H2ZC70"/>
        <gene id="3116" protId="H2ZFH2" geneId="uncharacterized_H2ZFH2"/>
        <gene id="3119" protId="H2YGG9" geneId="Csa.7408"/>
        <gene id="3121" protId="H2YRZ9" geneId="Csa.2971"/>
        <gene id="3123" protId="H2Z2S7" geneId="Csa.1968"/>
        <gene id="3125" protId="H2ZPM9" geneId="Csa.6094"/>
        <gene id="3126" protId="H2YZT5" geneId="Csa.9232"/>
        <gene id="3127" protId="H2YH12" geneId="Csa.3461"/>
        <gene id="3130" protId="H2Z8K6" geneId="Csa.10329"/>
        <gene id="3132" protId="H2Y6U8" geneId="Csa.1817"/>
        <gene id="3133" protId="H2Z4W8" geneId="uncharacterized_H2Z4W8"/>
        <gene id="3134" protId="H2Z1T2" geneId="uncharacterized_H2Z1T2"/>
        <gene id="3136" protId="H2ZH11" geneId="uncharacterized_H2ZH11"/>
        <gene id="3137" protId="H2Y5I5" geneId="uncharacterized_H2Y5I5"/>
        <gene id="3138" protId="H2ZBZ6" geneId="uncharacterized_H2ZBZ6"/>
        <gene id="3140" protId="H2YUG2" geneId="uncharacterized_H2YUG2"/>
        <gene id="3141" protId="H2YUI1" geneId="Csa.7299"/>
        <gene id="3143" protId="H2Y908" geneId="Csa.2920"/>
        <gene id="3144" protId="H2Y4P6" geneId="uncharacterized_H2Y4P6"/>
        <gene id="3146" protId="H2Z102" geneId="uncharacterized_H2Z102"/>
        <gene id="3148" protId="H2Y5M9" geneId="uncharacterized_H2Y5M9"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="C.savignyi" link="http://www.uniprot.org/taxonomy/51511"/>
    </notes>
  </species>
  <species name="Trypanosoma cruzi " NCBITaxId="5693">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="10" protId="K4EEB0" geneId="TCSYLVIO_000187"/>
        <gene id="15" protId="K4E485" geneId="TCSYLVIO_003506"/>
        <gene id="17" protId="K4DYP0" geneId="TCSYLVIO_005556"/>
        <gene id="19" protId="K4DYI8" geneId="TCSYLVIO_005762"/>
        <gene id="21" protId="K4E8G4" geneId="TCSYLVIO_002090"/>
        <gene id="23" protId="K4E4Y2" geneId="TCSYLVIO_003257"/>
        <gene id="25" protId="K4E6Y9" geneId="TCSYLVIO_002772"/>
        <gene id="27" protId="K4E228" geneId="TCSYLVIO_004705"/>
        <gene id="29" protId="K4E072" geneId="TCSYLVIO_004914"/>
        <gene id="31" protId="K4DM24" geneId="TCSYLVIO_009936"/>
        <gene id="33" protId="K4DX71" geneId="TCSYLVIO_006232"/>
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        <gene id="37" protId="K4DSZ3" geneId="TCSYLVIO_007523"/>
        <gene id="39" protId="K4DU07" geneId="TCSYLVIO_007229"/>
        <gene id="41" protId="K4E193" geneId="TCSYLVIO_004555"/>
        <gene id="43" protId="K4DWM5" geneId="TCSYLVIO_006177"/>
        <gene id="45" protId="K4DRI9" geneId="TCSYLVIO_008264"/>
        <gene id="47" protId="K4E797" geneId="TCSYLVIO_002864"/>
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        <gene id="51" protId="K4E050" geneId="TCSYLVIO_004938"/>
        <gene id="53" protId="K4DJ70" geneId="TCSYLVIO_010794"/>
        <gene id="55" protId="K4E6U8" geneId="TCSYLVIO_002561"/>
        <gene id="57" protId="K4DQJ1" geneId="TCSYLVIO_008621"/>
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        <gene id="2615" protId="K4E001" geneId="TCSYLVIO_005014"/>
        <gene id="2617" protId="K4E1J1" geneId="TCSYLVIO_004444"/>
        <gene id="2619" protId="K4DR83" geneId="TCSYLVIO_008195"/>
        <gene id="2621" protId="K4EAG5" geneId="TCSYLVIO_001676"/>
        <gene id="2622" protId="K4E5I4" geneId="TCSYLVIO_003036"/>
        <gene id="2623" protId="K4DU75" geneId="TCSYLVIO_007053"/>
        <gene id="2624" protId="K4EAE3" geneId="TCSYLVIO_001478"/>
        <gene id="2627" protId="K4EA12" geneId="TCSYLVIO_001843"/>
        <gene id="2629" protId="E7L6Y0" geneId="TCSYLVIO_002504"/>
        <gene id="2631" protId="K4DU14" geneId="TCSYLVIO_007395"/>
        <gene id="2633" protId="K4E2Z0" geneId="TCSYLVIO_004178"/>
        <gene id="2635" protId="K4EAR8" geneId="TCSYLVIO_001562"/>
        <gene id="2637" protId="K4E1S5" geneId="TCSYLVIO_004817"/>
        <gene id="2639" protId="K4EC55" geneId="TCSYLVIO_001067"/>
        <gene id="2641" protId="K4DT95" geneId="TCSYLVIO_007416"/>
        <gene id="2643" protId="K4DY25" geneId="TCSYLVIO_006116"/>
        <gene id="2645" protId="K4E4N6" geneId="TCSYLVIO_003361"/>
        <gene id="2647" protId="K4DUQ4" geneId="TCSYLVIO_007101"/>
        <gene id="2653" protId="K4E182" geneId="TCSYLVIO_005002"/>
        <gene id="2654" protId="K4DKV8" geneId="TCSYLVIO_010334"/>
        <gene id="2658" protId="K4E3U9" geneId="TCSYLVIO_003747"/>
        <gene id="2660" protId="K4DJP7" geneId="TCSYLVIO_010624"/>
        <gene id="2662" protId="K4DZR9" geneId="TCSYLVIO_005519"/>
        <gene id="2664" protId="K4E2U5" geneId="TCSYLVIO_004446"/>
        <gene id="2666" protId="K4E9G7" geneId="TCSYLVIO_001752"/>
        <gene id="2668" protId="K4DJR8" geneId="TCSYLVIO_010587"/>
        <gene id="2670" protId="K4E6W0" geneId="TCSYLVIO_002665"/>
        <gene id="2672" protId="K4E2P8" geneId="TCSYLVIO_004133"/>
        <gene id="2674" protId="K4DUT5" geneId="TCSYLVIO_007289"/>
        <gene id="2676" protId="K4E204" geneId="TCSYLVIO_004508"/>
        <gene id="2679" protId="K4DXN0" geneId="TCSYLVIO_006042"/>
        <gene id="2680" protId="K4DSQ7" geneId="TCSYLVIO_007606"/>
        <gene id="2682" protId="K4DNZ7" geneId="TCSYLVIO_009197"/>
        <gene id="2684" protId="K4E7K0" geneId="TCSYLVIO_002498"/>
        <gene id="2686" protId="K4E719" geneId="TCSYLVIO_002445"/>
        <gene id="2688" protId="K4DUT1" geneId="TCSYLVIO_007293"/>
        <gene id="2702" protId="K4DU77" geneId="TCSYLVIO_007073"/>
        <gene id="2706" protId="K4DYK3" geneId="TCSYLVIO_005960"/>
        <gene id="2709" protId="K4E3E9" geneId="TCSYLVIO_004229"/>
        <gene id="2712" protId="K4E6E0" geneId="TCSYLVIO_002944"/>
        <gene id="2714" protId="K4DX56" geneId="TCSYLVIO_006106"/>
        <gene id="2716" protId="K4E4J1" geneId="TCSYLVIO_003357"/>
        <gene id="2718" protId="K4DVY8" geneId="TCSYLVIO_006426"/>
        <gene id="2720" protId="K4DUJ4" geneId="TCSYLVIO_007032"/>
        <gene id="2722" protId="K4E138" geneId="TCSYLVIO_004602"/>
        <gene id="2724" protId="K4EAN3" geneId="TCSYLVIO_001163"/>
        <gene id="2726" protId="K4E7R6" geneId="TCSYLVIO_002341"/>
        <gene id="2728" protId="K4DS39" geneId="TCSYLVIO_008261"/>
        <gene id="2730" protId="K4DYS9" geneId="TCSYLVIO_005432"/>
        <gene id="2732" protId="K4DXZ7" geneId="TCSYLVIO_005709"/>
        <gene id="2734" protId="K4E4L1" geneId="TCSYLVIO_003456"/>
        <gene id="2736" protId="K4E555" geneId="TCSYLVIO_003292"/>
        <gene id="2738" protId="K4DNH7" geneId="TCSYLVIO_009206"/>
        <gene id="2740" protId="K4DSY0" geneId="TCSYLVIO_007524"/>
        <gene id="2742" protId="K4E779" geneId="TCSYLVIO_002382"/>
        <gene id="2745" protId="K4DU29" geneId="TCSYLVIO_007207"/>
        <gene id="2746" protId="K4E0M6" geneId="TCSYLVIO_004793"/>
        <gene id="2749" protId="K4E7N9" geneId="TCSYLVIO_002298"/>
        <gene id="2752" protId="K4EDB3" geneId="TCSYLVIO_000443"/>
        <gene id="2754" protId="K4DYF8" geneId="TCSYLVIO_005815"/>
        <gene id="2756" protId="K4E2J7" geneId="TCSYLVIO_004539"/>
        <gene id="2758" protId="K4E191" geneId="TCSYLVIO_004796"/>
        <gene id="2760" protId="K4DXC6" geneId="TCSYLVIO_006029"/>
        <gene id="2762" protId="K4EDU0" geneId="TCSYLVIO_000454"/>
        <gene id="2765" protId="K4E1I1" geneId="TCSYLVIO_004915"/>
        <gene id="2766" protId="K4DN15" geneId="TCSYLVIO_009378"/>
        <gene id="2768" protId="K4DZB9" geneId="TCSYLVIO_005685"/>
        <gene id="2769" protId="K4DUJ7" geneId="TCSYLVIO_007413"/>
        <gene id="2772" protId="K4E2W1" geneId="TCSYLVIO_004216"/>
        <gene id="2774" protId="K4E0R6" geneId="TCSYLVIO_004954"/>
        <gene id="2775" protId="K4E1V2" geneId="TCSYLVIO_004332"/>
        <gene id="2777" protId="K4E8H9" geneId="TCSYLVIO_002390"/>
        <gene id="2778" protId="K4E774" geneId="TCSYLVIO_002391"/>
        <gene id="2780" protId="K4E3B2" geneId="TCSYLVIO_003911"/>
        <gene id="2781" protId="K4DML9" geneId="TCSYLVIO_009589"/>
        <gene id="2783" protId="K4DK05" geneId="TCSYLVIO_010514"/>
        <gene id="2785" protId="K4DR25" geneId="TCSYLVIO_008274"/>
        <gene id="2787" protId="K4DTV6" geneId="TCSYLVIO_007196"/>
        <gene id="2789" protId="K4E352" geneId="TCSYLVIO_004095"/>
        <gene id="2791" protId="K4DQS9" geneId="TCSYLVIO_008415"/>
        <gene id="2793" protId="K4DUF4" geneId="TCSYLVIO_007000"/>
        <gene id="2795" protId="K4E3J1" geneId="TCSYLVIO_003758"/>
        <gene id="2797" protId="K4EDV9" geneId="TCSYLVIO_000074"/>
        <gene id="2799" protId="K4EB15" geneId="TCSYLVIO_001296"/>
        <gene id="2801" protId="K4EBC3" geneId="TCSYLVIO_001173"/>
        <gene id="2802" protId="K4ED04" geneId="TCSYLVIO_000471"/>
        <gene id="2803" protId="K4DR75" geneId="TCSYLVIO_008203"/>
        <gene id="2804" protId="K4DXM1" geneId="TCSYLVIO_005884"/>
        <gene id="2805" protId="K4DQ21" geneId="TCSYLVIO_008664"/>
        <gene id="2806" protId="K4DS42" geneId="TCSYLVIO_007848"/>
        <gene id="2807" protId="K4ED29" geneId="TCSYLVIO_000374"/>
        <gene id="2808" protId="K4DKB8" geneId="TCSYLVIO_010391"/>
        <gene id="2809" protId="K4ECX6" geneId="TCSYLVIO_000585"/>
        <gene id="2810" protId="K4DP63" geneId="TCSYLVIO_009010"/>
        <gene id="2811" protId="K4DPM1" geneId="TCSYLVIO_008869"/>
        <gene id="2812" protId="K4ECI1" geneId="TCSYLVIO_000752"/>
        <gene id="2813" protId="K4DL05" geneId="TCSYLVIO_010287"/>
        <gene id="2814" protId="K4DJJ3" geneId="TCSYLVIO_010762"/>
        <gene id="2815" protId="K4E732" geneId="TCSYLVIO_002583"/>
        <gene id="2816" protId="K4DJG1" geneId="TCSYLVIO_010844"/>
        <gene id="2817" protId="K4E8A7" geneId="TCSYLVIO_002155"/>
        <gene id="2818" protId="K4DL56" geneId="TCSYLVIO_010196"/>
        <gene id="2819" protId="K4DK93" geneId="TCSYLVIO_010410"/>
        <gene id="2820" protId="K4ECH6" geneId="TCSYLVIO_000929"/>
        <gene id="2821" protId="K4ECY0" geneId="TCSYLVIO_000496"/>
        <gene id="2822" protId="K4E7J9" geneId="TCSYLVIO_002286"/>
        <gene id="2823" protId="K4EDT3" geneId="TCSYLVIO_000105"/>
        <gene id="2824" protId="K4DIV8" geneId="TCSYLVIO_011019"/>
        <gene id="2825" protId="K4DLQ4" geneId="TCSYLVIO_010037"/>
        <gene id="2826" protId="K4DKQ6" geneId="TCSYLVIO_010228"/>
        <gene id="2827" protId="K4DIY4" geneId="TCSYLVIO_011046"/>
        <gene id="2828" protId="K4ED74" geneId="TCSYLVIO_000290"/>
        <gene id="2829" protId="K4DJ83" geneId="TCSYLVIO_010781"/>
        <gene id="2830" protId="K4DQB9" geneId="TCSYLVIO_008762"/>
        <gene id="2831" protId="K4EDK8" geneId="TCSYLVIO_000522"/>
        <gene id="2832" protId="K4DK40" geneId="TCSYLVIO_010494"/>
        <gene id="2834" protId="K4E0E0" geneId="TCSYLVIO_005304"/>
        <gene id="2836" protId="K4E1Q4" geneId="TCSYLVIO_004866"/>
        <gene id="2838" protId="K4E9X0" geneId="TCSYLVIO_001881"/>
        <gene id="2852" protId="K4DM15" geneId="TCSYLVIO_009790"/>
        <gene id="2853" protId="K4E0J3" geneId="TCSYLVIO_004889"/>
        <gene id="2855" protId="K4DM28" geneId="TCSYLVIO_009926"/>
        <gene id="2857" protId="K4DLD4" geneId="TCSYLVIO_010000"/>
        <gene id="2859" protId="K4E1B6" geneId="TCSYLVIO_004520"/>
        <gene id="2861" protId="K4DUG1" geneId="TCSYLVIO_007204"/>
        <gene id="2863" protId="K4EBB8" geneId="TCSYLVIO_001082"/>
        <gene id="2865" protId="K4EB00" geneId="TCSYLVIO_001207"/>
        <gene id="2866" protId="K4EB95" geneId="TCSYLVIO_001205"/>
        <gene id="2868" protId="K4DM33" geneId="TCSYLVIO_009931"/>
        <gene id="2870" protId="K4DXF3" geneId="TCSYLVIO_005927"/>
        <gene id="2872" protId="K4DNT7" geneId="TCSYLVIO_009134"/>
        <gene id="2874" protId="K4DUU2" geneId="TCSYLVIO_007062"/>
        <gene id="2876" protId="K4DUV1" geneId="TCSYLVIO_006827"/>
        <gene id="2880" protId="K4E5A8" geneId="TCSYLVIO_003121"/>
        <gene id="2882" protId="K4DT06" geneId="TCSYLVIO_007510"/>
        <gene id="2884" protId="K4DPS6" geneId="TCSYLVIO_008775"/>
        <gene id="2886" protId="K4EB73" geneId="TCSYLVIO_001411"/>
        <gene id="2888" protId="K4ED78" geneId="TCSYLVIO_000392"/>
        <gene id="2891" protId="K4DU58" geneId="TCSYLVIO_007071"/>
        <gene id="2892" protId="K4E2D8" geneId="TCSYLVIO_004596"/>
        <gene id="2893" protId="K4DSI0" geneId="TCSYLVIO_007685"/>
        <gene id="2895" protId="K4DJT0" geneId="TCSYLVIO_010588"/>
        <gene id="2896" protId="K4DK04" geneId="TCSYLVIO_010589"/>
        <gene id="2898" protId="K4DPC7" geneId="TCSYLVIO_008986"/>
        <gene id="2900" protId="K4DT66" geneId="TCSYLVIO_007658"/>
        <gene id="2902" protId="K4E8K3" geneId="TCSYLVIO_002372"/>
        <gene id="2904" protId="K4ED03" geneId="TCSYLVIO_000402"/>
        <gene id="2906" protId="K4DVX2" geneId="TCSYLVIO_006468"/>
        <gene id="2908" protId="K4E0H6" geneId="TCSYLVIO_005027"/>
        <gene id="2910" protId="K4DWS2" geneId="TCSYLVIO_006163"/>
        <gene id="2922" protId="K4E809" geneId="TCSYLVIO_002279"/>
        <gene id="2924" protId="K4DYA0" geneId="TCSYLVIO_005871"/>
        <gene id="2926" protId="K4DKP6" geneId="TCSYLVIO_010238"/>
        <gene id="2928" protId="K4E814" geneId="TCSYLVIO_002344"/>
        <gene id="2930" protId="K4DTA8" geneId="TCSYLVIO_007612"/>
        <gene id="2934" protId="K4DJ30" geneId="TCSYLVIO_010936"/>
        <gene id="2936" protId="K4DT76" geneId="TCSYLVIO_007642"/>
        <gene id="2937" protId="K4E6J4" geneId="TCSYLVIO_002673"/>
        <gene id="2939" protId="K4DT92" geneId="TCSYLVIO_007503"/>
        <gene id="2941" protId="K4ECW4" geneId="TCSYLVIO_000440"/>
        <gene id="2950" protId="K4DWF7" geneId="TCSYLVIO_006284"/>
        <gene id="2953" protId="K4DXJ5" geneId="TCSYLVIO_005905"/>
        <gene id="2955" protId="K4DXL9" geneId="TCSYLVIO_005844"/>
        <gene id="2956" protId="K4DXQ4" geneId="TCSYLVIO_005843"/>
        <gene id="2958" protId="K4DZ57" geneId="TCSYLVIO_005288"/>
        <gene id="2959" protId="K4DWX4" geneId="TCSYLVIO_006080"/>
        <gene id="2961" protId="K4E7I0" geneId="TCSYLVIO_002776"/>
        <gene id="2963" protId="K4E791" geneId="TCSYLVIO_002871"/>
        <gene id="2965" protId="K4DQA3" geneId="TCSYLVIO_008592"/>
        <gene id="2966" protId="K4E5V4" geneId="TCSYLVIO_002889"/>
        <gene id="2967" protId="K4E5Y6" geneId="TCSYLVIO_002888"/>
        <gene id="2970" protId="K4DYF7" geneId="TCSYLVIO_005660"/>
        <gene id="2972" protId="K4EBU2" geneId="TCSYLVIO_001184"/>
        <gene id="2974" protId="K4EE03" geneId="TCSYLVIO_000382"/>
        <gene id="2976" protId="K4DKW8" geneId="TCSYLVIO_010189"/>
        <gene id="2977" protId="K4ED56" geneId="TCSYLVIO_000349"/>
        <gene id="2978" protId="K4E778" geneId="TCSYLVIO_002881"/>
        <gene id="2979" protId="K4ECJ0" geneId="TCSYLVIO_000741"/>
        <gene id="2980" protId="K4EDF7" geneId="TCSYLVIO_000325"/>
        <gene id="2981" protId="K4DTG9" geneId="TCSYLVIO_007760"/>
        <gene id="2982" protId="K4DM82" geneId="TCSYLVIO_009823"/>
        <gene id="2983" protId="K4EC11" geneId="TCSYLVIO_000710"/>
        <gene id="2985" protId="K4DNE8" geneId="TCSYLVIO_009411"/>
        <gene id="2986" protId="K4DM89" geneId="TCSYLVIO_009868"/>
        <gene id="2988" protId="K4DLE8" geneId="TCSYLVIO_009980"/>
        <gene id="2990" protId="K4E638" geneId="TCSYLVIO_002819"/>
        <gene id="2992" protId="K4EB48" geneId="TCSYLVIO_001039"/>
        <gene id="2995" protId="K4DQS6" geneId="TCSYLVIO_008471"/>
        <gene id="2996" protId="K4EAS5" geneId="TCSYLVIO_001115"/>
        <gene id="2998" protId="K4E3G6" geneId="TCSYLVIO_003793"/>
        <gene id="3000" protId="K4E296" geneId="TCSYLVIO_004301"/>
        <gene id="3002" protId="K4DR69" geneId="TCSYLVIO_008289"/>
        <gene id="3006" protId="K4EAL8" geneId="TCSYLVIO_001336"/>
        <gene id="3008" protId="K4DSI7" geneId="TCSYLVIO_007657"/>
        <gene id="3010" protId="K4EB91" geneId="TCSYLVIO_000997"/>
        <gene id="3014" protId="K4DVH4" geneId="TCSYLVIO_007043"/>
        <gene id="3016" protId="K4DT50" geneId="TCSYLVIO_007545"/>
        <gene id="3018" protId="K4E5C5" geneId="TCSYLVIO_003209"/>
        <gene id="3020" protId="K4EB28" geneId="TCSYLVIO_001452"/>
        <gene id="3022" protId="K4E5T8" geneId="TCSYLVIO_003158"/>
        <gene id="3024" protId="K4DT68" geneId="TCSYLVIO_007444"/>
        <gene id="3026" protId="K4E126" geneId="TCSYLVIO_004703"/>
        <gene id="3028" protId="K4E6D6" geneId="TCSYLVIO_002945"/>
        <gene id="3030" protId="K4E3J2" geneId="TCSYLVIO_003714"/>
        <gene id="3032" protId="K4DN53" geneId="TCSYLVIO_009368"/>
        <gene id="3034" protId="K4DYE3" geneId="TCSYLVIO_005817"/>
        <gene id="3036" protId="K4DWI0" geneId="TCSYLVIO_006349"/>
        <gene id="3038" protId="K4DU00" geneId="TCSYLVIO_007148"/>
        <gene id="3040" protId="K4DZ09" geneId="TCSYLVIO_005381"/>
        <gene id="3042" protId="K4DXC8" geneId="TCSYLVIO_005923"/>
        <gene id="3046" protId="K4EAX6" geneId="TCSYLVIO_001064"/>
        <gene id="3050" protId="K4EA07" geneId="TCSYLVIO_001395"/>
        <gene id="3052" protId="K4E2Q3" geneId="TCSYLVIO_004045"/>
        <gene id="3053" protId="K4E761" geneId="TCSYLVIO_002553"/>
        <gene id="3055" protId="K4DP55" geneId="TCSYLVIO_009028"/>
        <gene id="3057" protId="K4DMK6" geneId="TCSYLVIO_009687"/>
        <gene id="3059" protId="K4DTW2" geneId="TCSYLVIO_007620"/>
        <gene id="3061" protId="K4DTY9" geneId="TCSYLVIO_007425"/>
        <gene id="3063" protId="K4EED7" geneId="TCSYLVIO_000051"/>
        <gene id="3064" protId="K4EDP0" geneId="TCSYLVIO_000084"/>
        <gene id="3066" protId="K4E6Y2" geneId="TCSYLVIO_002785"/>
        <gene id="3069" protId="K4E2N6" geneId="TCSYLVIO_004305"/>
        <gene id="3071" protId="K4EAR6" geneId="TCSYLVIO_001364"/>
        <gene id="3073" protId="K4EAP4" geneId="TCSYLVIO_001151"/>
        <gene id="3075" protId="K4EE92" geneId="TCSYLVIO_000038"/>
        <gene id="3101" protId="K4E596" geneId="TCSYLVIO_003575"/>
        <gene id="3103" protId="K4DZW7" geneId="TCSYLVIO_005118"/>
        <gene id="3104" protId="K4DZS8" geneId="TCSYLVIO_005158"/>
        <gene id="3105" protId="K4E0S2" geneId="TCSYLVIO_005159"/>
        <gene id="3106" protId="K4EAL6" geneId="TCSYLVIO_001410"/>
        <gene id="3107" protId="K4E3X5" geneId="TCSYLVIO_004057"/>
        <gene id="3108" protId="K4E7I9" geneId="TCSYLVIO_002404"/>
        <gene id="3113" protId="K4DTQ0" geneId="TCSYLVIO_007488"/>
        <gene id="3115" protId="K4DRA1" geneId="TCSYLVIO_008176"/>
        <gene id="3117" protId="K4E452" geneId="TCSYLVIO_003776"/>
        <gene id="3118" protId="K4DV31" geneId="TCSYLVIO_006980"/>
        <gene id="3120" protId="K4DR16" geneId="TCSYLVIO_008275"/>
        <gene id="3122" protId="K4E3P9" geneId="TCSYLVIO_003691"/>
        <gene id="3124" protId="K4E3S7" geneId="TCSYLVIO_003660"/>
        <gene id="3128" protId="K4E3Q2" geneId="TCSYLVIO_003910"/>
        <gene id="3129" protId="K4DIG1" geneId="TCSYLVIO_011102"/>
        <gene id="3131" protId="K4DXY3" geneId="TCSYLVIO_006159"/>
        <gene id="3135" protId="K4E453" geneId="TCSYLVIO_003536"/>
        <gene id="3139" protId="K4EA06" geneId="TCSYLVIO_001850"/>
        <gene id="3142" protId="K4DZ17" geneId="TCSYLVIO_005793"/>
        <gene id="3145" protId="K4ECS4" geneId="TCSYLVIO_000476"/>
        <gene id="3147" protId="K4E0R3" geneId="TCSYLVIO_004746"/>
        <gene id="3149" protId="K4E579" geneId="TCSYLVIO_003280"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="T.cruzi" link="http://www.uniprot.org/taxonomy/5693"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
    <orthologGroup id="1">
      <score id="bit" value="3095"/>
      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="0.34"/>
      </geneRef>
      <geneRef id="3">
        <score id="inparalog" value="0.183"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="2967"/>
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