<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="482" inparalogs="1318"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Chloroflexus aurantiacus " NCBITaxId="324602">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
      <genes>
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        <gene id="3" protId="A9WCJ8" geneId="carB"/>
        <gene id="6" protId="A9WHJ8" geneId="Caur_3126"/>
        <gene id="8" protId="A9WFV9" geneId="dnaK"/>
        <gene id="10" protId="A9WH07" geneId="Caur_0869"/>
        <gene id="12" protId="A9WJF0" geneId="valS"/>
        <gene id="14" protId="A9WJJ3" geneId="ileS"/>
        <gene id="16" protId="A9WBV3" geneId="sucA"/>
        <gene id="18" protId="A9WIK5" geneId="Caur_1073"/>
        <gene id="21" protId="A9WGS4" geneId="atpD"/>
        <gene id="23" protId="A9WEI4" geneId="Caur_2034"/>
        <gene id="25" protId="A9WD77" geneId="Caur_1827"/>
        <gene id="27" protId="A9WER4" geneId="Caur_0578"/>
        <gene id="29" protId="A9WGU4" geneId="lepA"/>
        <gene id="31" protId="A9WGS6" geneId="atpA"/>
        <gene id="33" protId="A9WG14" geneId="Caur_2969"/>
        <gene id="35" protId="A9WJN7" geneId="groL1"/>
        <gene id="36" protId="A9WFA3" geneId="groL2"/>
        <gene id="38" protId="A9WH62" geneId="fusA"/>
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        <gene id="42" protId="A9WCR2" geneId="alaS"/>
        <gene id="44" protId="A9WAN3" geneId="Caur_0003"/>
        <gene id="46" protId="A9WJZ0" geneId="Caur_1212"/>
        <gene id="48" protId="A9WGB5" geneId="lon"/>
        <gene id="50" protId="A9WF10" geneId="Caur_2113"/>
        <gene id="52" protId="A9WIW3" geneId="fhs"/>
        <gene id="54" protId="A9WKM7" geneId="Caur_3471"/>
        <gene id="57" protId="A9WFP3" geneId="tuf1"/>
        <gene id="59" protId="A9WKF5" geneId="Caur_2832"/>
        <gene id="61" protId="A9WKL7" geneId="mnmG"/>
        <gene id="63" protId="A9WJW3" geneId="Caur_3394"/>
        <gene id="65" protId="A9WEJ0" geneId="ftsH"/>
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        <gene id="69" protId="A9WJ95" geneId="gpmI"/>
        <gene id="71" protId="A9WGQ3" geneId="metK"/>
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        <gene id="75" protId="A9WK21" geneId="Caur_1244"/>
        <gene id="77" protId="A9WJ21" geneId="glpK"/>
        <gene id="79" protId="A9W9X0" geneId="Caur_1378"/>
        <gene id="80" protId="A9WKH8" geneId="Caur_3421"/>
        <gene id="82" protId="A9WCM4" geneId="eno"/>
        <gene id="84" protId="A9WC24" geneId="Caur_0163"/>
        <gene id="86" protId="A9WJ75" geneId="pyrG"/>
        <gene id="88" protId="A9WIV3" geneId="Caur_2624"/>
        <gene id="91" protId="A9WA77" geneId="Caur_1408"/>
        <gene id="93" protId="A9WJQ6" geneId="Caur_3336"/>
        <gene id="98" protId="A9WD10" geneId="Caur_0328"/>
        <gene id="100" protId="A9WJD3" geneId="htpG"/>
        <gene id="102" protId="A9WFB6" geneId="Caur_2901"/>
        <gene id="104" protId="A9WE57" geneId="glmS"/>
        <gene id="106" protId="A9WJ72" geneId="Caur_1119"/>
        <gene id="108" protId="A9WAB2" geneId="Caur_1443"/>
        <gene id="110" protId="A9WFB4" geneId="nuoD2"/>
        <gene id="112" protId="A9W9Q2" geneId="proS"/>
        <gene id="114" protId="A9WGP6" geneId="infB"/>
        <gene id="116" protId="A9WJR4" geneId="Caur_3344"/>
        <gene id="118" protId="A9WJX4" geneId="thrS"/>
        <gene id="120" protId="A9WK04" geneId="lysS"/>
        <gene id="122" protId="A9WI58" geneId="glyA"/>
        <gene id="124" protId="A9WBL1" geneId="Caur_1600"/>
        <gene id="127" protId="A9W9P7" geneId="Caur_1305"/>
        <gene id="128" protId="A9WD84" geneId="Caur_1834"/>
        <gene id="130" protId="A9WKE4" geneId="pgk"/>
        <gene id="132" protId="A9WJZ5" geneId="Caur_1217"/>
        <gene id="134" protId="A9WF95" geneId="Caur_2878"/>
        <gene id="135" protId="A9WCD5" geneId="Caur_1709"/>
        <gene id="136" protId="A9WCD6" geneId="Caur_1710"/>
        <gene id="138" protId="A9WEM2" geneId="Caur_2840"/>
        <gene id="140" protId="A9WI67" geneId="Caur_3163"/>
        <gene id="142" protId="A9WGQ4" geneId="ahcY"/>
        <gene id="144" protId="A9WJH8" geneId="Caur_2677"/>
        <gene id="146" protId="A9WEW0" geneId="purD"/>
        <gene id="148" protId="A9WGE3" geneId="Caur_2266"/>
        <gene id="150" protId="A9WE89" geneId="Caur_0501"/>
        <gene id="152" protId="A9WEU7" geneId="guaB"/>
        <gene id="154" protId="A9WAR7" geneId="leuB"/>
        <gene id="156" protId="A9WI34" geneId="aroC"/>
        <gene id="158" protId="A9WDF2" geneId="Caur_3894"/>
        <gene id="160" protId="A9WDZ7" geneId="purA"/>
        <gene id="162" protId="A9WG15" geneId="gatB"/>
        <gene id="164" protId="A9WCM5" geneId="Caur_3809"/>
        <gene id="166" protId="A9WE29" geneId="Caur_1973"/>
        <gene id="168" protId="A9WGJ7" geneId="aspS"/>
        <gene id="170" protId="A9WE22" geneId="Caur_1966"/>
        <gene id="173" protId="A9WKM1" geneId="metG"/>
        <gene id="175" protId="A9WAX8" geneId="Caur_1540"/>
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        <gene id="179" protId="A9WFZ9" geneId="mutS"/>
        <gene id="181" protId="A9WDV1" geneId="Caur_1895"/>
        <gene id="183" protId="A9WIB9" geneId="Caur_3220"/>
        <gene id="184" protId="A9WAD0" geneId="Caur_1461"/>
        <gene id="187" protId="A9WJ74" geneId="sucC"/>
        <gene id="189" protId="A9WCD8" geneId="gatA"/>
        <gene id="191" protId="A9WK27" geneId="Caur_1250"/>
        <gene id="196" protId="A9WHF7" geneId="Caur_3084"/>
        <gene id="199" protId="A9WDV3" geneId="Caur_1897"/>
        <gene id="201" protId="A9WGX7" geneId="Caur_0839"/>
        <gene id="207" protId="A9WFB7" geneId="Caur_2902"/>
        <gene id="209" protId="A9WEK8" geneId="purH"/>
        <gene id="211" protId="A9WGJ1" geneId="Caur_2314"/>
        <gene id="213" protId="A9WBV2" geneId="Caur_3726"/>
        <gene id="214" protId="A9WCB7" geneId="Caur_1691"/>
        <gene id="216" protId="A9WF67" geneId="Caur_2850"/>
        <gene id="218" protId="A9WC77" geneId="Caur_0217"/>
        <gene id="220" protId="A9WEL6" geneId="Caur_2066"/>
        <gene id="222" protId="A9WA07" geneId="Caur_3505"/>
        <gene id="224" protId="A9WEM4" geneId="Caur_2842"/>
        <gene id="226" protId="A9WF01" geneId="Caur_2104"/>
        <gene id="228" protId="A9WH12" geneId="rpoB"/>
        <gene id="231" protId="A9WIR4" geneId="Caur_2585"/>
        <gene id="233" protId="A9WBV5" geneId="Caur_3729"/>
        <gene id="234" protId="A9WAP0" geneId="Caur_0010"/>
        <gene id="236" protId="A9WFI7" geneId="Caur_0685"/>
        <gene id="238" protId="A9WJS0" geneId="argJ"/>
        <gene id="240" protId="A9WD90" geneId="cysS"/>
        <gene id="242" protId="A9WCE4" geneId="argD"/>
        <gene id="244" protId="A9WAX3" geneId="gltX"/>
        <gene id="246" protId="A9WE30" geneId="Caur_1974"/>
        <gene id="248" protId="A9WKM8" geneId="metX"/>
        <gene id="250" protId="A9WEH7" geneId="argS"/>
        <gene id="252" protId="A9WAY6" geneId="Caur_1548"/>
        <gene id="255" protId="A9WBM7" geneId="proA"/>
        <gene id="257" protId="A9WD13" geneId="Caur_0331"/>
        <gene id="259" protId="A9WIS8" geneId="Caur_2599"/>
        <gene id="262" protId="A9WIT1" geneId="Caur_2602"/>
        <gene id="265" protId="A9WBE8" geneId="Caur_0101"/>
        <gene id="267" protId="A9WH11" geneId="rpoC"/>
        <gene id="271" protId="A9WDU4" geneId="Caur_1888"/>
        <gene id="273" protId="A9WEY1" geneId="Caur_2084"/>
        <gene id="275" protId="A9WHV7" geneId="serC"/>
        <gene id="277" protId="A9WJU2" geneId="Caur_3373"/>
        <gene id="278" protId="A9WHK7" geneId="Caur_3136"/>
        <gene id="281" protId="A9WFQ6" geneId="prs"/>
        <gene id="284" protId="A9WEJ5" geneId="Caur_2045"/>
        <gene id="286" protId="A9W9Z4" geneId="Caur_3492"/>
        <gene id="288" protId="A9WK62" geneId="obg"/>
        <gene id="290" protId="A9WDR5" geneId="Caur_0421"/>
        <gene id="292" protId="A9WFD8" geneId="smc"/>
        <gene id="294" protId="A9WKE3" geneId="mnmE"/>
        <gene id="296" protId="A9WA70" geneId="Caur_1401"/>
        <gene id="298" protId="A9WJD2" geneId="moaA"/>
        <gene id="300" protId="A9WE19" geneId="Caur_1963"/>
        <gene id="303" protId="A9WBL2" geneId="Caur_1601"/>
        <gene id="305" protId="A9WA59" geneId="Caur_3557"/>
        <gene id="306" protId="A9WCR0" geneId="Caur_3845"/>
        <gene id="308" protId="A9WFK3" geneId="Caur_0702"/>
        <gene id="310" protId="A9WIS6" geneId="hemE"/>
        <gene id="312" protId="A9WCQ3" geneId="Caur_3838"/>
        <gene id="320" protId="A9WII1" geneId="Caur_1049"/>
        <gene id="321" protId="A9WFQ7" geneId="Caur_2198"/>
        <gene id="323" protId="A9WE79" geneId="prfA"/>
        <gene id="325" protId="A9WEX0" geneId="dnaJ"/>
        <gene id="327" protId="A9WIS5" geneId="Caur_2596"/>
        <gene id="329" protId="A9WAX2" geneId="proB"/>
        <gene id="331" protId="A9W9Z9" geneId="gcvT"/>
        <gene id="333" protId="A9WD44" geneId="Caur_1794"/>
        <gene id="335" protId="A9WEM1" geneId="lipA"/>
        <gene id="337" protId="A9WHD6" geneId="Caur_2439"/>
        <gene id="339" protId="A9WE28" geneId="Caur_1972"/>
        <gene id="341" protId="A9WA78" geneId="trpS"/>
        <gene id="343" protId="A9WFR7" geneId="panB"/>
        <gene id="345" protId="A9WAC7" geneId="Caur_1458"/>
        <gene id="347" protId="A9WC90" geneId="Caur_0230"/>
        <gene id="349" protId="A9WBV8" geneId="tgt"/>
        <gene id="351" protId="A9WHN0" geneId="Caur_3160"/>
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        <gene id="355" protId="A9WH69" geneId="rplB"/>
        <gene id="357" protId="A9WEY3" geneId="Caur_2086"/>
        <gene id="358" protId="A9WGN8" geneId="Caur_3005"/>
        <gene id="362" protId="A9WCW3" geneId="Caur_0280"/>
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        <gene id="372" protId="A9WDI1" geneId="pyrD"/>
        <gene id="374" protId="A9WDL7" geneId="Caur_0373"/>
        <gene id="376" protId="A9WH03" geneId="carA"/>
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        <gene id="379" protId="A9WFH5" geneId="Caur_0673"/>
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        <gene id="406" protId="A9WFR5" geneId="Caur_2206"/>
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        <gene id="1267" protId="A9WJK5" geneId="Caur_2704"/>
        <gene id="1268" protId="A9WI01" geneId="Caur_2485"/>
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        <gene id="1283" protId="A9WGD9" geneId="Caur_2262"/>
        <gene id="1285" protId="A9WBH8" geneId="Caur_0131"/>
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        <gene id="1295" protId="A9WHB9" geneId="Caur_2422"/>
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        <gene id="1299" protId="A9WFG7" geneId="Caur_0665"/>
        <gene id="1307" protId="A9WE31" geneId="Caur_1975"/>
        <gene id="1308" protId="A9W9Y9" geneId="Caur_3487"/>
        <gene id="1310" protId="A9WCI9" geneId="Caur_1763"/>
        <gene id="1313" protId="A9WCZ1" geneId="Caur_0309"/>
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        <gene id="1316" protId="A9W9U4" geneId="Caur_1352"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="C.aurantiacus" link="http://www.uniprot.org/taxonomy/324602"/>
    </notes>
  </species>
  <species name="Fibroporia radiculosa " NCBITaxId="1078123">
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    <notes>
      <additionalInformation abbreviation="F.radiculosa" link="http://www.uniprot.org/taxonomy/1078123"/>
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