<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="2606" inparalogs="10011"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Bos taurus " NCBITaxId="9913">
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        <gene id="9911" protId="Q5E9A9" geneId="DDA1"/>
        <gene id="9912" protId="Q2NKT8" geneId="MGC137055"/>
        <gene id="9914" protId="Q0VBY7" geneId="DNAJC24"/>
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        <gene id="9930" protId="P82916" geneId="MRPS17"/>
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        <gene id="9937" protId="F1MX35" geneId="PGPEP1L"/>
        <gene id="9938" protId="E1BN15" geneId="PGPEP1"/>
        <gene id="9940" protId="F1MCF4" geneId="TMEM64"/>
        <gene id="9943" protId="Q32L89" geneId="PIGH"/>
        <gene id="9946" protId="P00126" geneId="UQCRH"/>
        <gene id="9948" protId="Q2NKT1" geneId="PFN4"/>
        <gene id="9951" protId="F1MN33" geneId="uncharacterized_F1MN33"/>
        <gene id="9952" protId="Q3SZB5" geneId="CCDC115"/>
        <gene id="9954" protId="Q2M2S5" geneId="COA6"/>
        <gene id="9956" protId="Q3SZ47" geneId="MRPL33"/>
        <gene id="9958" protId="Q2KIZ3" geneId="MCEE"/>
        <gene id="9963" protId="G5E526" geneId="PTP4A1"/>
        <gene id="9964" protId="A6QL75" geneId="PTP4A2"/>
        <gene id="9965" protId="A2VDT1" geneId="PTP4A3"/>
        <gene id="9967" protId="F1MC42" geneId="NEIL1"/>
        <gene id="9970" protId="F1MDD0" geneId="PSMG4"/>
        <gene id="9972" protId="A6H773" geneId="TMEM70"/>
        <gene id="9974" protId="A5D7A7" geneId="C26H10ORF2"/>
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        <gene id="9977" protId="E1B8I0" geneId="uncharacterized_E1B8I0"/>
        <gene id="9980" protId="A6QQ14" geneId="POLE4"/>
        <gene id="9981" protId="Q0P5E8" geneId="CHRAC1"/>
        <gene id="9983" protId="A7E351" geneId="ALKBH1"/>
        <gene id="9985" protId="Q2KIL7" geneId="R3HDM4"/>
        <gene id="9987" protId="F1MK91" geneId="uncharacterized_F1MK91"/>
        <gene id="9989" protId="Q02368" geneId="NDUFB7"/>
        <gene id="9991" protId="E1BNY1" geneId="CDA"/>
        <gene id="9993" protId="Q95KE5" geneId="MRPL43"/>
        <gene id="9995" protId="Q5E9H9" geneId="ABHD10"/>
        <gene id="9999" protId="E1B7C9" geneId="EME2"/>
        <gene id="10000" protId="G3N153" geneId="EME1"/>
        <gene id="10002" protId="E1B9V6" geneId="ZFYVE20"/>
        <gene id="10004" protId="E1BP86" geneId="LSMD1"/>
        <gene id="10006" protId="F1N1B0" geneId="WBSCR27"/>
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      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="B.taurus" link="http://www.uniprot.org/taxonomy/9913"/>
    </notes>
  </species>
  <species name="Hordeum vulgare var. distichum " NCBITaxId="112509">
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        <gene id="9945" protId="M0WM59" geneId="uncharacterized_M0WM59"/>
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        <gene id="9953" protId="M0WXZ8" geneId="uncharacterized_M0WXZ8"/>
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        <gene id="9957" protId="M0W0T4" geneId="uncharacterized_M0W0T4"/>
        <gene id="9959" protId="F2CS07" geneId="uncharacterized_F2CS07"/>
        <gene id="9960" protId="M0WVW0" geneId="uncharacterized_M0WVW0"/>
        <gene id="9961" protId="M0UT95" geneId="uncharacterized_M0UT95"/>
        <gene id="9962" protId="M0XPE2" geneId="uncharacterized_M0XPE2"/>
        <gene id="9966" protId="M0V2Z5" geneId="uncharacterized_M0V2Z5"/>
        <gene id="9968" protId="M0YE06" geneId="uncharacterized_M0YE06"/>
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        <gene id="9973" protId="M0X5K2" geneId="uncharacterized_M0X5K2"/>
        <gene id="9975" protId="M0XJ03" geneId="uncharacterized_M0XJ03"/>
        <gene id="9978" protId="M0YY87" geneId="uncharacterized_M0YY87"/>
        <gene id="9979" protId="M0V3Q4" geneId="uncharacterized_M0V3Q4"/>
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        <gene id="9986" protId="F2CYA0" geneId="uncharacterized_F2CYA0"/>
        <gene id="9988" protId="M0YU12" geneId="uncharacterized_M0YU12"/>
        <gene id="9990" protId="M0X437" geneId="uncharacterized_M0X437"/>
        <gene id="9992" protId="M0VJH6" geneId="uncharacterized_M0VJH6"/>
        <gene id="9994" protId="F2E3G0" geneId="uncharacterized_F2E3G0"/>
        <gene id="9996" protId="M0UY02" geneId="uncharacterized_M0UY02"/>
        <gene id="9997" protId="M0V928" geneId="uncharacterized_M0V928"/>
        <gene id="9998" protId="F2DXQ2" geneId="uncharacterized_F2DXQ2"/>
        <gene id="10001" protId="M0VVE0" geneId="uncharacterized_M0VVE0"/>
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        <gene id="10005" protId="M0WQF5" geneId="uncharacterized_M0WQF5"/>
        <gene id="10007" protId="F2D779" geneId="uncharacterized_F2D779"/>
        <gene id="10008" protId="M0Z1Y6" geneId="uncharacterized_M0Z1Y6"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="H.vulgare" link="http://www.uniprot.org/taxonomy/112509"/>
    </notes>
  </species>
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    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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