<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="4368" inparalogs="15649"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Bos taurus " NCBITaxId="9913">
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        <gene id="11" protId="E1BFB0" geneId="SPTAN1"/>
        <gene id="13" protId="E1BH78" geneId="LOC100850262"/>
        <gene id="15" protId="P49951" geneId="CLTC"/>
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        <gene id="24" protId="E1BMN5" geneId="SPTBN2"/>
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        <gene id="15272" protId="E1B6X7" geneId="LOC516396"/>
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        <gene id="15542" protId="E1BFT5" geneId="INHBE"/>
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        <gene id="15546" protId="F1MX15" geneId="LOC618625"/>
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        <gene id="15583" protId="P13271" geneId="UQCRQ"/>
        <gene id="15586" protId="E1BMY1" geneId="uncharacterized_E1BMY1"/>
        <gene id="15587" protId="P48305" geneId="NDUFB4"/>
        <gene id="15589" protId="P79345" geneId="NPC2"/>
        <gene id="15591" protId="F1MVB5" geneId="C23H6orf136"/>
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        <gene id="15596" protId="Q9BEG9" geneId="SOCS3"/>
        <gene id="15598" protId="F1ME24" geneId="ANKRD34B"/>
        <gene id="15599" protId="G3N3W0" geneId="ANKRD34C"/>
        <gene id="15600" protId="F1MBJ0" geneId="ANKRD34A"/>
        <gene id="15602" protId="Q58DQ0" geneId="AS3MT"/>
        <gene id="15603" protId="E1BBT7" geneId="uncharacterized_E1BBT7"/>
        <gene id="15606" protId="E1B9S8" geneId="CBFB"/>
        <gene id="15609" protId="E1BCL2" geneId="FRRS1L"/>
        <gene id="15611" protId="Q3ZCH6" geneId="ATF4"/>
        <gene id="15613" protId="Q3ZC71" geneId="DPM3"/>
        <gene id="15615" protId="F1MXS3" geneId="LOC518623"/>
        <gene id="15616" protId="G3N1N0" geneId="GLYATL3"/>
        <gene id="15617" protId="Q2KIR7" geneId="GLYAT"/>
        <gene id="15618" protId="O77512" geneId="uncharacterized_O77512"/>
        <gene id="15619" protId="E1B7T8" geneId="GLYATL2"/>
        <gene id="15623" protId="Q3ZBM4" geneId="ITGB1BP1"/>
        <gene id="15625" protId="A7YW22" geneId="JAM3"/>
        <gene id="15626" protId="A4IFI9" geneId="JAM2"/>
        <gene id="15627" protId="Q9XT56" geneId="F11R"/>
        <gene id="15633" protId="Q9XTA2" geneId="PREP"/>
        <gene id="15636" protId="Q3ZBN0" geneId="ABRACL"/>
        <gene id="15639" protId="E1BHC3" geneId="PET100"/>
        <gene id="15641" protId="Q32P97" geneId="UXT"/>
        <gene id="15643" protId="F1MQ97" geneId="METTL23"/>
        <gene id="15644" protId="A4FV42" geneId="METTL21A"/>
        <gene id="15646" protId="Q17QA0" geneId="GEMIN7"/>
        <gene id="15648" protId="P00430" geneId="COX7C"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="B.taurus" link="http://www.uniprot.org/taxonomy/9913"/>
    </notes>
  </species>
  <species name="Caenorhabditis brenneri " NCBITaxId="135651">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="7" protId="G0PMG3" geneId="CAEBREN_31615"/>
        <gene id="9" protId="G0NCX1" geneId="Cbn-lrp-1"/>
        <gene id="10" protId="G0P113" geneId="CAEBREN_28281"/>
        <gene id="12" protId="G0M7G2" geneId="Cbn-spc-1"/>
        <gene id="14" protId="G0MCR5" geneId="CAEBREN_12565"/>
        <gene id="16" protId="G0MKK4" geneId="Cbn-chc-1"/>
        <gene id="18" protId="G0N244" geneId="CAEBREN_32550"/>
        <gene id="20" protId="G0N3L4" geneId="CAEBREN_30014"/>
        <gene id="21" protId="G0P6A6" geneId="Cbn-pyr-1"/>
        <gene id="25" protId="G0MY27" geneId="CAEBREN_07293"/>
        <gene id="28" protId="G0MEB5" geneId="CAEBREN_19738"/>
        <gene id="33" protId="G0M6Z5" geneId="Cbn-nmy-1"/>
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        <gene id="47" protId="G0NE18" geneId="Cbn-myo-5"/>
        <gene id="48" protId="G0NKK7" geneId="Cbn-myo-1"/>
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        <gene id="50" protId="G0MX92" geneId="CAEBREN_24138"/>
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        <gene id="60" protId="G0P5P9" geneId="CAEBREN_31884"/>
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        <gene id="83" protId="G0MQ34" geneId="CAEBREN_10758"/>
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        <gene id="124" protId="G0NA09" geneId="CAEBREN_15430"/>
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        <gene id="198" protId="G0PMD9" geneId="CAEBREN_32553"/>
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        <gene id="201" protId="G0MVN9" geneId="Cbn-cdc-48.1"/>
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        <gene id="210" protId="G0NRM2" geneId="CAEBREN_31210"/>
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        <gene id="216" protId="G0P3C9" geneId="CAEBREN_28994"/>
        <gene id="219" protId="G0MEX9" geneId="Cbn-isw-1"/>
        <gene id="223" protId="G0ME81" geneId="CAEBREN_12407"/>
        <gene id="227" protId="G0MVH3" geneId="Cbn-ptp-3"/>
        <gene id="229" protId="G0MV41" geneId="CAEBREN_24914"/>
        <gene id="231" protId="G0MG99" geneId="CAEBREN_11394"/>
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    <notes>
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