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    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="B.subtilis" link="http://www.uniprot.org/taxonomy/224308"/>
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        <gene id="1339" protId="G1Q0B8" geneId="uncharacterized_G1Q0B8"/>
        <gene id="1340" protId="G1PZI4" geneId="uncharacterized_G1PZI4"/>
        <gene id="1343" protId="G1P7Y3" geneId="uncharacterized_G1P7Y3"/>
        <gene id="1345" protId="G1PE23" geneId="uncharacterized_G1PE23"/>
        <gene id="1351" protId="G1NVV3" geneId="uncharacterized_G1NVV3"/>
        <gene id="1353" protId="G1NW72" geneId="uncharacterized_G1NW72"/>
        <gene id="1354" protId="G1PIN2" geneId="uncharacterized_G1PIN2"/>
        <gene id="1356" protId="G1NTZ4" geneId="uncharacterized_G1NTZ4"/>
        <gene id="1357" protId="G1NT55" geneId="uncharacterized_G1NT55"/>
        <gene id="1359" protId="G1PCE1" geneId="uncharacterized_G1PCE1"/>
        <gene id="1362" protId="G1PRH0" geneId="uncharacterized_G1PRH0"/>
        <gene id="1366" protId="G1Q4T3" geneId="uncharacterized_G1Q4T3"/>
        <gene id="1367" protId="G1NUX6" geneId="uncharacterized_G1NUX6"/>
        <gene id="1368" protId="G1QBQ7" geneId="uncharacterized_G1QBQ7"/>
        <gene id="1369" protId="G1NZI4" geneId="uncharacterized_G1NZI4"/>
        <gene id="1370" protId="G1P6B1" geneId="uncharacterized_G1P6B1"/>
        <gene id="1372" protId="G1NW82" geneId="uncharacterized_G1NW82"/>
        <gene id="1373" protId="G1Q1A3" geneId="uncharacterized_G1Q1A3"/>
        <gene id="1374" protId="G1Q9H9" geneId="uncharacterized_G1Q9H9"/>
        <gene id="1376" protId="G1PCY3" geneId="uncharacterized_G1PCY3"/>
        <gene id="1377" protId="G1PHZ1" geneId="uncharacterized_G1PHZ1"/>
        <gene id="1379" protId="G1PA40" geneId="uncharacterized_G1PA40"/>
        <gene id="1381" protId="G1PRA7" geneId="uncharacterized_G1PRA7"/>
        <gene id="1384" protId="G1PPK1" geneId="uncharacterized_G1PPK1"/>
        <gene id="1385" protId="G1PRC9" geneId="uncharacterized_G1PRC9"/>
        <gene id="1388" protId="G1P3A8" geneId="uncharacterized_G1P3A8"/>
        <gene id="1390" protId="G1Q157" geneId="uncharacterized_G1Q157"/>
        <gene id="1391" protId="G1QF07" geneId="uncharacterized_G1QF07"/>
        <gene id="1393" protId="G1P1W6" geneId="uncharacterized_G1P1W6"/>
        <gene id="1395" protId="G1P935" geneId="uncharacterized_G1P935"/>
        <gene id="1396" protId="G1QF23" geneId="uncharacterized_G1QF23"/>
        <gene id="1397" protId="G1QA38" geneId="uncharacterized_G1QA38"/>
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        <gene id="1400" protId="G1NYT5" geneId="uncharacterized_G1NYT5"/>
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        <gene id="1405" protId="G1P8K1" geneId="uncharacterized_G1P8K1"/>
        <gene id="1407" protId="G1Q2K6" geneId="uncharacterized_G1Q2K6"/>
        <gene id="1412" protId="G1Q9W7" geneId="uncharacterized_G1Q9W7"/>
        <gene id="1414" protId="G1P1L6" geneId="uncharacterized_G1P1L6"/>
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        <gene id="1416" protId="G1Q4W8" geneId="uncharacterized_G1Q4W8"/>
        <gene id="1418" protId="G1PXH3" geneId="uncharacterized_G1PXH3"/>
        <gene id="1420" protId="G1P596" geneId="uncharacterized_G1P596"/>
        <gene id="1421" protId="G1Q0Z0" geneId="uncharacterized_G1Q0Z0"/>
        <gene id="1423" protId="G1NX84" geneId="uncharacterized_G1NX84"/>
        <gene id="1425" protId="G1PBC7" geneId="uncharacterized_G1PBC7"/>
        <gene id="1427" protId="G1PSU9" geneId="uncharacterized_G1PSU9"/>
        <gene id="1429" protId="G1PT47" geneId="uncharacterized_G1PT47"/>
        <gene id="1432" protId="G1P6C3" geneId="uncharacterized_G1P6C3"/>
        <gene id="1433" protId="G1NSC4" geneId="uncharacterized_G1NSC4"/>
        <gene id="1434" protId="G1QCX9" geneId="uncharacterized_G1QCX9"/>
        <gene id="1435" protId="G1Q5J0" geneId="uncharacterized_G1Q5J0"/>
        <gene id="1436" protId="G1PQP1" geneId="uncharacterized_G1PQP1"/>
        <gene id="1437" protId="G1QDW8" geneId="uncharacterized_G1QDW8"/>
        <gene id="1439" protId="G1PPM9" geneId="uncharacterized_G1PPM9"/>
        <gene id="1440" protId="G1Q6K2" geneId="uncharacterized_G1Q6K2"/>
        <gene id="1441" protId="G1PUS3" geneId="uncharacterized_G1PUS3"/>
        <gene id="1444" protId="G1PCP7" geneId="uncharacterized_G1PCP7"/>
        <gene id="1445" protId="G1PGB3" geneId="uncharacterized_G1PGB3"/>
        <gene id="1446" protId="G1PKH3" geneId="uncharacterized_G1PKH3"/>
        <gene id="1447" protId="G1PFN6" geneId="uncharacterized_G1PFN6"/>
        <gene id="1448" protId="G1Q124" geneId="uncharacterized_G1Q124"/>
        <gene id="1450" protId="G1P921" geneId="uncharacterized_G1P921"/>
        <gene id="1451" protId="G1NTH8" geneId="uncharacterized_G1NTH8"/>
        <gene id="1454" protId="G1PLQ5" geneId="uncharacterized_G1PLQ5"/>
        <gene id="1457" protId="G1P288" geneId="uncharacterized_G1P288"/>
        <gene id="1458" protId="G1PBD0" geneId="uncharacterized_G1PBD0"/>
        <gene id="1459" protId="G1PYS7" geneId="uncharacterized_G1PYS7"/>
        <gene id="1460" protId="G1PP66" geneId="uncharacterized_G1PP66"/>
        <gene id="1461" protId="G1PCA8" geneId="uncharacterized_G1PCA8"/>
        <gene id="1462" protId="G1QBZ5" geneId="uncharacterized_G1QBZ5"/>
        <gene id="1463" protId="G1PYC1" geneId="uncharacterized_G1PYC1"/>
        <gene id="1464" protId="G1PW73" geneId="uncharacterized_G1PW73"/>
        <gene id="1465" protId="G1P8U2" geneId="uncharacterized_G1P8U2"/>
        <gene id="1466" protId="G1PR49" geneId="uncharacterized_G1PR49"/>
        <gene id="1467" protId="G1PNL4" geneId="uncharacterized_G1PNL4"/>
        <gene id="1468" protId="G1P5A4" geneId="uncharacterized_G1P5A4"/>
        <gene id="1469" protId="G1QAW4" geneId="uncharacterized_G1QAW4"/>
        <gene id="1470" protId="G1PW64" geneId="uncharacterized_G1PW64"/>
        <gene id="1471" protId="G1Q5W2" geneId="CYP2B6"/>
        <gene id="1472" protId="G1PH95" geneId="uncharacterized_G1PH95"/>
        <gene id="1473" protId="G1NTR0" geneId="uncharacterized_G1NTR0"/>
        <gene id="1474" protId="G1QAZ0" geneId="uncharacterized_G1QAZ0"/>
        <gene id="1475" protId="G1PBQ3" geneId="uncharacterized_G1PBQ3"/>
        <gene id="1476" protId="G1Q3N8" geneId="uncharacterized_G1Q3N8"/>
        <gene id="1477" protId="G1P1N5" geneId="uncharacterized_G1P1N5"/>
        <gene id="1478" protId="G1Q3D1" geneId="uncharacterized_G1Q3D1"/>
        <gene id="1480" protId="G1PAR5" geneId="uncharacterized_G1PAR5"/>
        <gene id="1481" protId="G1NVI0" geneId="uncharacterized_G1NVI0"/>
        <gene id="1482" protId="G1PRR9" geneId="uncharacterized_G1PRR9"/>
        <gene id="1483" protId="G1NVC3" geneId="uncharacterized_G1NVC3"/>
        <gene id="1484" protId="G1P9A3" geneId="uncharacterized_G1P9A3"/>
        <gene id="1486" protId="G1P8I8" geneId="uncharacterized_G1P8I8"/>
        <gene id="1487" protId="G1PFX4" geneId="uncharacterized_G1PFX4"/>
        <gene id="1488" protId="G1PEM5" geneId="uncharacterized_G1PEM5"/>
        <gene id="1490" protId="G1PL61" geneId="uncharacterized_G1PL61"/>
        <gene id="1492" protId="G1Q453" geneId="uncharacterized_G1Q453"/>
        <gene id="1495" protId="G1P3J7" geneId="uncharacterized_G1P3J7"/>
        <gene id="1497" protId="G1P9X8" geneId="uncharacterized_G1P9X8"/>
        <gene id="1498" protId="G1P072" geneId="uncharacterized_G1P072"/>
        <gene id="1500" protId="G1PDC2" geneId="uncharacterized_G1PDC2"/>
        <gene id="1501" protId="G1QCD6" geneId="uncharacterized_G1QCD6"/>
        <gene id="1503" protId="G1PQR8" geneId="uncharacterized_G1PQR8"/>
        <gene id="1504" protId="G1PDS0" geneId="uncharacterized_G1PDS0"/>
        <gene id="1506" protId="G1NYW2" geneId="uncharacterized_G1NYW2"/>
        <gene id="1507" protId="G1PV13" geneId="uncharacterized_G1PV13"/>
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        <gene id="1510" protId="G1NZ25" geneId="uncharacterized_G1NZ25"/>
        <gene id="1511" protId="G1P317" geneId="uncharacterized_G1P317"/>
        <gene id="1512" protId="G1PER3" geneId="uncharacterized_G1PER3"/>
        <gene id="1513" protId="G1PHW8" geneId="uncharacterized_G1PHW8"/>
        <gene id="1514" protId="G1PM40" geneId="uncharacterized_G1PM40"/>
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        <gene id="1516" protId="G1PQL9" geneId="uncharacterized_G1PQL9"/>
        <gene id="1517" protId="G1NXS7" geneId="uncharacterized_G1NXS7"/>
        <gene id="1518" protId="G1PML7" geneId="uncharacterized_G1PML7"/>
        <gene id="1519" protId="G1PIQ5" geneId="uncharacterized_G1PIQ5"/>
        <gene id="1520" protId="G1P5Y1" geneId="uncharacterized_G1P5Y1"/>
        <gene id="1521" protId="G1P7G0" geneId="uncharacterized_G1P7G0"/>
        <gene id="1522" protId="G1Q380" geneId="uncharacterized_G1Q380"/>
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        <gene id="1524" protId="G1PBZ9" geneId="uncharacterized_G1PBZ9"/>
        <gene id="1525" protId="G1NX89" geneId="uncharacterized_G1NX89"/>
        <gene id="1526" protId="G1Q9H6" geneId="uncharacterized_G1Q9H6"/>
        <gene id="1527" protId="G1PQB3" geneId="uncharacterized_G1PQB3"/>
        <gene id="1528" protId="G1QER2" geneId="uncharacterized_G1QER2"/>
        <gene id="1529" protId="G1PMU2" geneId="uncharacterized_G1PMU2"/>
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        <gene id="1536" protId="G1QDZ9" geneId="uncharacterized_G1QDZ9"/>
        <gene id="1537" protId="G1NYR0" geneId="uncharacterized_G1NYR0"/>
        <gene id="1538" protId="G1PQ88" geneId="uncharacterized_G1PQ88"/>
        <gene id="1539" protId="G1NYK1" geneId="uncharacterized_G1NYK1"/>
        <gene id="1540" protId="G1Q651" geneId="uncharacterized_G1Q651"/>
        <gene id="1541" protId="G1PJ96" geneId="uncharacterized_G1PJ96"/>
        <gene id="1542" protId="G1NSY2" geneId="uncharacterized_G1NSY2"/>
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        <gene id="1548" protId="G1Q9B2" geneId="CDK4"/>
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        <gene id="1556" protId="G1NT33" geneId="uncharacterized_G1NT33"/>
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        <gene id="1559" protId="G1P019" geneId="uncharacterized_G1P019"/>
        <gene id="1560" protId="G1PV37" geneId="uncharacterized_G1PV37"/>
        <gene id="1565" protId="G1P760" geneId="uncharacterized_G1P760"/>
        <gene id="1566" protId="G1Q9P4" geneId="uncharacterized_G1Q9P4"/>
        <gene id="1569" protId="G1NTW3" geneId="KMO"/>
        <gene id="1571" protId="G1P4K1" geneId="uncharacterized_G1P4K1"/>
        <gene id="1574" protId="G1PPF1" geneId="uncharacterized_G1PPF1"/>
        <gene id="1576" protId="G1PTB7" geneId="uncharacterized_G1PTB7"/>
        <gene id="1577" protId="G1PDT6" geneId="uncharacterized_G1PDT6"/>
        <gene id="1579" protId="G1PMP8" geneId="uncharacterized_G1PMP8"/>
        <gene id="1581" protId="G1PMX4" geneId="uncharacterized_G1PMX4"/>
        <gene id="1582" protId="G1Q3U8" geneId="uncharacterized_G1Q3U8"/>
        <gene id="1584" protId="G1PE15" geneId="uncharacterized_G1PE15"/>
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        <gene id="1587" protId="G1PJF9" geneId="uncharacterized_G1PJF9"/>
        <gene id="1588" protId="G1P998" geneId="uncharacterized_G1P998"/>
        <gene id="1590" protId="G1NY16" geneId="uncharacterized_G1NY16"/>
        <gene id="1591" protId="G1P002" geneId="uncharacterized_G1P002"/>
        <gene id="1593" protId="G1P1L1" geneId="uncharacterized_G1P1L1"/>
        <gene id="1595" protId="L7N121" geneId="uncharacterized_L7N121"/>
        <gene id="1596" protId="G1PVM5" geneId="uncharacterized_G1PVM5"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="M.lucifugus" link="http://www.uniprot.org/taxonomy/59463"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="5">
        <score id="inparalog" value="0.209"/>
      </geneRef>
    </orthologGroup>
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      <score id="bit" value="844"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.137"/>
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      <geneRef id="8">
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        <score id="bootstrap" value="1"/>
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      <geneRef id="9">
        <score id="inparalog" value="0.275"/>
      </geneRef>
    </orthologGroup>
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      <score id="bit" value="716"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.762"/>
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        <score id="inparalog" value="0.566"/>
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      <score id="bit" value="645"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.94"/>
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      <score id="bit" value="615"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.614"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.76"/>
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        <score id="inparalog" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="545"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.89"/>
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