<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="4969" inparalogs="15947"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Amphimedon queenslandica " NCBITaxId="400682">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="5" protId="I1GF34" geneId="uncharacterized_I1GF34"/>
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        <gene id="9" protId="I1FIQ8" geneId="uncharacterized_I1FIQ8"/>
        <gene id="11" protId="I1FA46" geneId="LOC100635213"/>
        <gene id="13" protId="I1FXG0" geneId="uncharacterized_I1FXG0"/>
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        <gene id="17" protId="I1G8L0" geneId="LOC100638842"/>
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        <gene id="21" protId="I1G2Y1" geneId="LOC100631861"/>
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        <gene id="35" protId="I1FUE2" geneId="uncharacterized_I1FUE2"/>
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        <gene id="39" protId="I1F9W5" geneId="uncharacterized_I1F9W5"/>
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        <gene id="15937" protId="I1ELA0" geneId="uncharacterized_I1ELA0"/>
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        <gene id="15946" protId="I1F4Q1" geneId="LOC100641347"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="A.queenslandica" link="http://www.uniprot.org/taxonomy/400682"/>
    </notes>
  </species>
  <species name="Gorilla gorilla gorilla " NCBITaxId="9595">
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        <gene id="15460" protId="G3RJ89" geneId="RPP14"/>
        <gene id="15462" protId="G3SEG1" geneId="FUNDC1"/>
        <gene id="15463" protId="G3SAZ0" geneId="FUNDC2"/>
        <gene id="15464" protId="G3RFF3" geneId="uncharacterized_G3RFF3"/>
        <gene id="15465" protId="G3S2W5" geneId="ENSG00000165775"/>
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        <gene id="15471" protId="G3QHN1" geneId="VEZT"/>
        <gene id="15473" protId="G3R003" geneId="LSM11"/>
        <gene id="15475" protId="G3S564" geneId="C19orf55"/>
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        <gene id="15480" protId="G3SIP0" geneId="ENSG00000213976"/>
        <gene id="15481" protId="G3QSC1" geneId="ZNF506"/>
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        <gene id="15483" protId="G3R8H5" geneId="ZNF664"/>
        <gene id="15484" protId="G3QHB6" geneId="ENSG00000196214"/>
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        <gene id="15486" protId="G3SH24" geneId="ENSG00000223645"/>
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        <gene id="15488" protId="G3RFD0" geneId="ENSG00000213297"/>
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        <gene id="15490" protId="G3QRP8" geneId="ZNF32"/>
        <gene id="15491" protId="G3SHJ5" geneId="uncharacterized_G3SHJ5"/>
        <gene id="15492" protId="P51503" geneId="ZNF80"/>
        <gene id="15493" protId="G3R283" geneId="ZNF691"/>
        <gene id="15494" protId="G3SIC1" geneId="uncharacterized_G3SIC1"/>
        <gene id="15495" protId="G3RAN9" geneId="ZNF707"/>
        <gene id="15496" protId="G3RVC6" geneId="ZNF75A"/>
        <gene id="15497" protId="G3QKE1" geneId="ENSG00000198580"/>
        <gene id="15498" protId="G3SG79" geneId="uncharacterized_G3SG79"/>
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        <gene id="15501" protId="G3REP9" geneId="ENSG00000184635"/>
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        <gene id="15504" protId="G3R7T8" geneId="uncharacterized_G3R7T8"/>
        <gene id="15505" protId="G3QMY4" geneId="ZNF575"/>
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        <gene id="15510" protId="G3RTV3" geneId="ENSG00000172818"/>
        <gene id="15515" protId="G3QV54" geneId="JAM3"/>
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        <gene id="15528" protId="G3RNA4" geneId="uncharacterized_G3RNA4"/>
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        <gene id="15533" protId="G3QNB3" geneId="C22orf39"/>
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        <gene id="15548" protId="G3QSM4" geneId="STAR"/>
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        <gene id="15836" protId="G3S1D3" geneId="GIMAP2"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="G.gorilla" link="http://www.uniprot.org/taxonomy/9595"/>
    </notes>
  </species>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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        <score id="bootstrap" value="1"/>
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