<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="1685" inparalogs="4745"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Ailuropoda melanoleuca " NCBITaxId="9646">
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        <gene id="3" protId="G1M642" geneId="uncharacterized_G1M642"/>
        <gene id="4" protId="G1LBF7" geneId="LOC100472538"/>
        <gene id="6" protId="G1LQW6" geneId="DNAH1"/>
        <gene id="8" protId="G1MEZ7" geneId="LOC100476836"/>
        <gene id="10" protId="G1LDV2" geneId="DNAH7"/>
        <gene id="11" protId="G1LZ89" geneId="LOC100464388"/>
        <gene id="12" protId="G1LHS3" geneId="DNAH3"/>
        <gene id="14" protId="G1LV71" geneId="DYNC2H1"/>
        <gene id="16" protId="G1LHJ8" geneId="LOC100467615"/>
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        <gene id="20" protId="D2HIC5" geneId="ASCC3"/>
        <gene id="22" protId="G1L4R0" geneId="LOC100465885"/>
        <gene id="24" protId="G1LWC5" geneId="DNAJC13"/>
        <gene id="26" protId="G1L3F5" geneId="IFT172"/>
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        <gene id="29" protId="G1LXY8" geneId="CLTCL1"/>
        <gene id="31" protId="G1M4G3" geneId="LOC100474573"/>
        <gene id="32" protId="G1MDP5" geneId="LOC100474644"/>
        <gene id="34" protId="G1MAF6" geneId="LOC100470305"/>
        <gene id="36" protId="G1M4C5" geneId="IARS"/>
        <gene id="38" protId="G1MC66" geneId="POLR3B"/>
        <gene id="40" protId="G1LHS6" geneId="LOC100474045"/>
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        <gene id="81" protId="D2GYI3" geneId="HSPA2"/>
        <gene id="82" protId="G1MKK0" geneId="LOC100470236"/>
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        <gene id="93" protId="G1LIQ4" geneId="uncharacterized_G1LIQ4"/>
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        <gene id="97" protId="D2HMA6" geneId="ATP6V1A"/>
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        <gene id="267" protId="G1MH51" geneId="UGGT1"/>
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        <gene id="2038" protId="G1LLY3" geneId="LOC100479198"/>
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        <gene id="4444" protId="G1L839" geneId="LOC100471835"/>
        <gene id="4446" protId="G1MI12" geneId="LOC100473051"/>
        <gene id="4448" protId="G1LLQ1" geneId="SMPDL3A"/>
        <gene id="4449" protId="G1LXD1" geneId="SMPDL3B"/>
        <gene id="4450" protId="D2HR66" geneId="SMPD1"/>
        <gene id="4452" protId="D2I8K8" geneId="LOC100475370"/>
        <gene id="4453" protId="D2I1W6" geneId="PABPC5"/>
        <gene id="4455" protId="D2HYA1" geneId="RCE1"/>
        <gene id="4457" protId="G1LFQ5" geneId="C8orf82"/>
        <gene id="4459" protId="G1LM43" geneId="uncharacterized_G1LM43"/>
        <gene id="4502" protId="D2HMJ2" geneId="TRIM45"/>
        <gene id="4503" protId="G1MHI2" geneId="LOC100476031"/>
        <gene id="4504" protId="D2HR64" geneId="TRIM3"/>
        <gene id="4505" protId="D2GXS7" geneId="TRIM2"/>
        <gene id="4506" protId="G1L6S7" geneId="TRIM71"/>
        <gene id="4508" protId="G1L986" geneId="uncharacterized_G1L986"/>
        <gene id="4509" protId="G1M1W2" geneId="RBM3"/>
        <gene id="4511" protId="D2H7Y0" geneId="DHDH"/>
        <gene id="4514" protId="G1LZ14" geneId="RFXANK"/>
        <gene id="4515" protId="G1LYJ4" geneId="ANKRA2"/>
        <gene id="4517" protId="G1LFT6" geneId="uncharacterized_G1LFT6"/>
        <gene id="4519" protId="G1LGH7" geneId="RWDD1"/>
        <gene id="4521" protId="G1LF40" geneId="POLR3F"/>
        <gene id="4523" protId="G1LSK0" geneId="TMEM18"/>
        <gene id="4525" protId="G1MCR6" geneId="LOC100466666"/>
        <gene id="4527" protId="G1MG29" geneId="TWF1"/>
        <gene id="4529" protId="G1LTF8" geneId="KCTD17"/>
        <gene id="4530" protId="G1LRB9" geneId="KCTD2"/>
        <gene id="4532" protId="G1LMG8" geneId="SMYD4"/>
        <gene id="4534" protId="G1LD23" geneId="LOC100472029"/>
        <gene id="4536" protId="G1LXW3" geneId="SLC50A1"/>
        <gene id="4538" protId="G1LQI9" geneId="LOC100467304"/>
        <gene id="4539" protId="G1M380" geneId="RHCG"/>
        <gene id="4540" protId="G1M7T7" geneId="LOC100467112"/>
        <gene id="4541" protId="G1LUH5" geneId="LOC100480659"/>
        <gene id="4543" protId="G1LDM3" geneId="LRRC46"/>
        <gene id="4546" protId="G1LN15" geneId="PLA2G15"/>
        <gene id="4547" protId="G1MGU9" geneId="LCAT"/>
        <gene id="4549" protId="G1MD72" geneId="uncharacterized_G1MD72"/>
        <gene id="4550" protId="G1LIS3" geneId="RPGRIP1"/>
        <gene id="4552" protId="D2GTW0" geneId="NUP93"/>
        <gene id="4554" protId="G1M4G1" geneId="FAM129A"/>
        <gene id="4555" protId="G1MEE3" geneId="FAM129B"/>
        <gene id="4556" protId="G1LVV2" geneId="LOC100472732"/>
        <gene id="4558" protId="D2I2Z7" geneId="PRKAB2"/>
        <gene id="4559" protId="G1MC61" geneId="PRKAB1"/>
        <gene id="4561" protId="G1LJV1" geneId="BROX"/>
        <gene id="4563" protId="G1LIV2" geneId="LOC100483874"/>
        <gene id="4565" protId="G1LYA9" geneId="PTRH2"/>
        <gene id="4567" protId="G1LFS1" geneId="TSFM"/>
        <gene id="4569" protId="G1LEU0" geneId="ENOPH1"/>
        <gene id="4571" protId="G1MG98" geneId="SSR1"/>
        <gene id="4573" protId="D2HBB8" geneId="G3BP2"/>
        <gene id="4574" protId="G1LMQ3" geneId="LOC100470608"/>
        <gene id="4575" protId="G1L3P7" geneId="uncharacterized_G1L3P7"/>
        <gene id="4577" protId="G1L3D0" geneId="LOC100465803"/>
        <gene id="4580" protId="D2HBH3" geneId="CYB561D1"/>
        <gene id="4581" protId="D2HES2" geneId="CYB561D2"/>
        <gene id="4583" protId="G1LP76" geneId="DEK"/>
        <gene id="4585" protId="G1LXN1" geneId="DNAJC8"/>
        <gene id="4587" protId="G1MFU9" geneId="GINS3"/>
        <gene id="4589" protId="G1MBJ9" geneId="TEX261"/>
        <gene id="4591" protId="D2HKI2" geneId="LOC100466496"/>
        <gene id="4594" protId="D2HIN6" geneId="MAF1"/>
        <gene id="4596" protId="G1MIU2" geneId="FAM161B"/>
        <gene id="4597" protId="G1L9Y7" geneId="LOC100467776"/>
        <gene id="4599" protId="G1LHT0" geneId="C15orf26"/>
        <gene id="4601" protId="G1LUE5" geneId="EIF3K"/>
        <gene id="4603" protId="G1M5X6" geneId="LOC100475877"/>
        <gene id="4605" protId="D2HZR9" geneId="B3GALT5"/>
        <gene id="4606" protId="D2HZZ5" geneId="B3GALT1"/>
        <gene id="4607" protId="D2HM04" geneId="B3GALT2"/>
        <gene id="4608" protId="D2HVY3" geneId="B3GALNT1"/>
        <gene id="4609" protId="G1MKU6" geneId="B3GNT6"/>
        <gene id="4610" protId="G1LW86" geneId="B3GNT3"/>
        <gene id="4611" protId="D2H2B9" geneId="B3GNT5"/>
        <gene id="4612" protId="G1L310" geneId="uncharacterized_G1L310"/>
        <gene id="4613" protId="G1MMP8" geneId="B3GNT4"/>
        <gene id="4614" protId="D2GZ00" geneId="B3GALT4"/>
        <gene id="4615" protId="G1MN18" geneId="B3GNT9"/>
        <gene id="4616" protId="D2HMT2" geneId="B3GNT8"/>
        <gene id="4643" protId="D2HLA9" geneId="GRAPL"/>
        <gene id="4644" protId="G1LRX7" geneId="GRB2"/>
        <gene id="4645" protId="D2GZL6" geneId="GRAP2"/>
        <gene id="4646" protId="G1LNJ3" geneId="CRK"/>
        <gene id="4647" protId="D2HUK7" geneId="CRKL"/>
        <gene id="4648" protId="G1L4C1" geneId="uncharacterized_G1L4C1"/>
        <gene id="4650" protId="D2HIC2" geneId="RBMS3"/>
        <gene id="4652" protId="G1L1U4" geneId="POC5"/>
        <gene id="4654" protId="D2H4H0" geneId="NOP14"/>
        <gene id="4656" protId="G1LC95" geneId="LOC100471807"/>
        <gene id="4658" protId="G1LJ66" geneId="NAPRT1"/>
        <gene id="4660" protId="G1LXH6" geneId="C5orf44"/>
        <gene id="4662" protId="G1LPF9" geneId="ZFP36"/>
        <gene id="4663" protId="G1M708" geneId="ZFP36L1"/>
        <gene id="4664" protId="G1LG81" geneId="uncharacterized_G1LG81"/>
        <gene id="4666" protId="D2HC60" geneId="ATPAF1"/>
        <gene id="4668" protId="G1LL58" geneId="LOC100474710"/>
        <gene id="4669" protId="G1LGA4" geneId="RHOT1"/>
        <gene id="4671" protId="D2HD91" geneId="RBMX"/>
        <gene id="4672" protId="G1LTI8" geneId="uncharacterized_G1LTI8"/>
        <gene id="4673" protId="G1MBA4" geneId="CSTF2T"/>
        <gene id="4674" protId="D2H5R1" geneId="SRSF5"/>
        <gene id="4675" protId="G1M0U8" geneId="LOC100466441"/>
        <gene id="4677" protId="G1LU06" geneId="SMYD1"/>
        <gene id="4678" protId="G1MBE7" geneId="SMYD2"/>
        <gene id="4679" protId="G1LMU8" geneId="uncharacterized_G1LMU8"/>
        <gene id="4681" protId="D2HHW9" geneId="DNAJB9"/>
        <gene id="4683" protId="G1LJP7" geneId="PEX14"/>
        <gene id="4685" protId="G1L1U3" geneId="CARNS1"/>
        <gene id="4687" protId="G1LR96" geneId="NOX1"/>
        <gene id="4688" protId="G1LL82" geneId="CYBB"/>
        <gene id="4689" protId="G1M2I2" geneId="NOX3"/>
        <gene id="4690" protId="G1LF61" geneId="NOX4"/>
        <gene id="4691" protId="G1M6F7" geneId="NOX5"/>
        <gene id="4694" protId="G1M8Z8" geneId="LOC100464526"/>
        <gene id="4695" protId="G1LAR8" geneId="AGFG1"/>
        <gene id="4698" protId="G1M1I4" geneId="ALS2CL"/>
        <gene id="4699" protId="G1M3Y1" geneId="ALS2"/>
        <gene id="4701" protId="G1KZJ9" geneId="DAP3"/>
        <gene id="4703" protId="G1M4N3" geneId="AATF"/>
        <gene id="4705" protId="D2HIB1" geneId="TPMT"/>
        <gene id="4707" protId="D2I8L5" geneId="MAN1B1"/>
        <gene id="4709" protId="G1LCL4" geneId="LOC100474613"/>
        <gene id="4711" protId="G1M4H5" geneId="MCM10"/>
        <gene id="4713" protId="G1MIK8" geneId="LOC100466793"/>
        <gene id="4715" protId="G1MGH8" geneId="CDKN2C"/>
        <gene id="4716" protId="D2HGY2" geneId="CDKN2D"/>
        <gene id="4717" protId="G1LLW9" geneId="LOC100473431"/>
        <gene id="4718" protId="G1LFC3" geneId="ANKRD39"/>
        <gene id="4719" protId="G1L0L3" geneId="ANKRD46"/>
        <gene id="4721" protId="D2HX74" geneId="TIMM50"/>
        <gene id="4725" protId="D2H7P2" geneId="EBP"/>
        <gene id="4726" protId="G1L7N7" geneId="EBPL"/>
        <gene id="4728" protId="G1M769" geneId="BPHL"/>
        <gene id="4732" protId="G1MB53" geneId="C12orf5"/>
        <gene id="4735" protId="G1L576" geneId="TOLLIP"/>
        <gene id="4737" protId="D2HES1" geneId="TMEM115"/>
        <gene id="4739" protId="D2H5L0" geneId="EXOSC1"/>
        <gene id="4741" protId="D2H3L4" geneId="FAM20B"/>
        <gene id="4742" protId="G1L894" geneId="FAM20C"/>
        <gene id="4743" protId="D2HSY0" geneId="FAM20A"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="A.melanoleuca" link="http://www.uniprot.org/taxonomy/9646"/>
    </notes>
  </species>
  <species name="Trypanosoma cruzi " NCBITaxId="5693">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="5" protId="K4E4I4" geneId="TCSYLVIO_003486"/>
        <gene id="7" protId="K4DLE1" geneId="TCSYLVIO_009993"/>
        <gene id="9" protId="K4EEB0" geneId="TCSYLVIO_000187"/>
        <gene id="13" protId="K4E485" geneId="TCSYLVIO_003506"/>
        <gene id="15" protId="K4DYP0" geneId="TCSYLVIO_005556"/>
        <gene id="17" protId="K4E9F0" geneId="TCSYLVIO_001596"/>
        <gene id="19" protId="K4DYI8" geneId="TCSYLVIO_005762"/>
        <gene id="21" protId="K4E8G4" geneId="TCSYLVIO_002090"/>
        <gene id="23" protId="K4DK07" geneId="TCSYLVIO_010497"/>
        <gene id="25" protId="K4E4Y2" geneId="TCSYLVIO_003257"/>
        <gene id="27" protId="K4DRI9" geneId="TCSYLVIO_008264"/>
        <gene id="30" protId="K4E050" geneId="TCSYLVIO_004938"/>
        <gene id="33" protId="K4E6Y9" geneId="TCSYLVIO_002772"/>
        <gene id="35" protId="K4E072" geneId="TCSYLVIO_004914"/>
        <gene id="37" protId="K4E228" geneId="TCSYLVIO_004705"/>
        <gene id="39" protId="K4DU07" geneId="TCSYLVIO_007229"/>
        <gene id="41" protId="K4DX71" geneId="TCSYLVIO_006232"/>
        <gene id="43" protId="K4E193" geneId="TCSYLVIO_004555"/>
        <gene id="45" protId="K4DM24" geneId="TCSYLVIO_009936"/>
        <gene id="47" protId="K4E6Y0" geneId="TCSYLVIO_002970"/>
        <gene id="50" protId="K4DSZ3" geneId="TCSYLVIO_007523"/>
        <gene id="53" protId="K4DWM5" geneId="TCSYLVIO_006177"/>
        <gene id="55" protId="K4EB39" geneId="TCSYLVIO_001052"/>
        <gene id="57" protId="K4E797" geneId="TCSYLVIO_002864"/>
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        <gene id="339" protId="K4E2X7" geneId="TCSYLVIO_004194"/>
        <gene id="341" protId="K4DLM5" geneId="TCSYLVIO_009955"/>
        <gene id="343" protId="K4E6U1" geneId="TCSYLVIO_002680"/>
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        <gene id="348" protId="K4DZ88" geneId="TCSYLVIO_005485"/>
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        <gene id="4360" protId="K4DTW2" geneId="TCSYLVIO_007620"/>
        <gene id="4362" protId="K4E263" geneId="TCSYLVIO_004233"/>
        <gene id="4364" protId="K4E5G7" geneId="TCSYLVIO_003499"/>
        <gene id="4366" protId="K4DYZ4" geneId="TCSYLVIO_005566"/>
        <gene id="4368" protId="K4EB73" geneId="TCSYLVIO_001411"/>
        <gene id="4370" protId="K4EB91" geneId="TCSYLVIO_000997"/>
        <gene id="4372" protId="K4E8N0" geneId="TCSYLVIO_002345"/>
        <gene id="4375" protId="K4EC43" geneId="TCSYLVIO_000701"/>
        <gene id="4376" protId="K4DPB4" geneId="TCSYLVIO_008959"/>
        <gene id="4379" protId="K4DYA0" geneId="TCSYLVIO_005871"/>
        <gene id="4382" protId="K4E483" geneId="TCSYLVIO_003953"/>
        <gene id="4384" protId="K4E0R3" geneId="TCSYLVIO_004746"/>
        <gene id="4387" protId="K4EB15" geneId="TCSYLVIO_001296"/>
        <gene id="4389" protId="K4DT74" geneId="TCSYLVIO_007649"/>
        <gene id="4391" protId="K4DR99" geneId="TCSYLVIO_008244"/>
        <gene id="4395" protId="K4EAK7" geneId="TCSYLVIO_001346"/>
        <gene id="4398" protId="K4E3P9" geneId="TCSYLVIO_003691"/>
        <gene id="4400" protId="K4DT68" geneId="TCSYLVIO_007444"/>
        <gene id="4402" protId="K4E3V5" geneId="TCSYLVIO_003743"/>
        <gene id="4404" protId="K4DU00" geneId="TCSYLVIO_007148"/>
        <gene id="4406" protId="K4DZQ9" geneId="TCSYLVIO_005342"/>
        <gene id="4408" protId="K4DTG9" geneId="TCSYLVIO_007760"/>
        <gene id="4409" protId="K4DKW8" geneId="TCSYLVIO_010189"/>
        <gene id="4410" protId="K4ED56" geneId="TCSYLVIO_000349"/>
        <gene id="4411" protId="K4ECJ0" geneId="TCSYLVIO_000741"/>
        <gene id="4412" protId="K4DM82" geneId="TCSYLVIO_009823"/>
        <gene id="4415" protId="K4E391" geneId="TCSYLVIO_004056"/>
        <gene id="4418" protId="K4DSI7" geneId="TCSYLVIO_007657"/>
        <gene id="4420" protId="K4E2A5" geneId="TCSYLVIO_004290"/>
        <gene id="4422" protId="K4DWS2" geneId="TCSYLVIO_006163"/>
        <gene id="4424" protId="K4E7A0" geneId="TCSYLVIO_002625"/>
        <gene id="4431" protId="K4DQS6" geneId="TCSYLVIO_008471"/>
        <gene id="4432" protId="K4EAS5" geneId="TCSYLVIO_001115"/>
        <gene id="4436" protId="K4E6C6" geneId="TCSYLVIO_003184"/>
        <gene id="4439" protId="K4E5Q3" geneId="TCSYLVIO_002977"/>
        <gene id="4441" protId="K4E8J4" geneId="TCSYLVIO_001913"/>
        <gene id="4443" protId="K4E0E0" geneId="TCSYLVIO_005304"/>
        <gene id="4445" protId="K4E779" geneId="TCSYLVIO_002382"/>
        <gene id="4447" protId="K4DLZ1" geneId="TCSYLVIO_009923"/>
        <gene id="4451" protId="K4E3U9" geneId="TCSYLVIO_003747"/>
        <gene id="4454" protId="K4E466" geneId="TCSYLVIO_003489"/>
        <gene id="4456" protId="K4DW80" geneId="TCSYLVIO_006334"/>
        <gene id="4458" protId="K4EB28" geneId="TCSYLVIO_001452"/>
        <gene id="4460" protId="K4DL35" geneId="TCSYLVIO_010135"/>
        <gene id="4461" protId="K4E7J9" geneId="TCSYLVIO_002286"/>
        <gene id="4462" protId="K4DMG5" geneId="TCSYLVIO_009613"/>
        <gene id="4463" protId="K4DIN8" geneId="TCSYLVIO_010985"/>
        <gene id="4464" protId="K4ECG5" geneId="TCSYLVIO_000939"/>
        <gene id="4465" protId="K4E8A7" geneId="TCSYLVIO_002155"/>
        <gene id="4466" protId="K4DIX5" geneId="TCSYLVIO_010997"/>
        <gene id="4467" protId="K4DIT5" geneId="TCSYLVIO_010924"/>
        <gene id="4468" protId="K4DJG1" geneId="TCSYLVIO_010844"/>
        <gene id="4469" protId="K4ECH6" geneId="TCSYLVIO_000929"/>
        <gene id="4470" protId="K4DL45" geneId="TCSYLVIO_010093"/>
        <gene id="4471" protId="K4DSK2" geneId="TCSYLVIO_007930"/>
        <gene id="4472" protId="K4ECY0" geneId="TCSYLVIO_000496"/>
        <gene id="4473" protId="K4DKX5" geneId="TCSYLVIO_010195"/>
        <gene id="4474" protId="K4DRP7" geneId="TCSYLVIO_008008"/>
        <gene id="4475" protId="K4EDK8" geneId="TCSYLVIO_000522"/>
        <gene id="4476" protId="K4DPB6" geneId="TCSYLVIO_008938"/>
        <gene id="4477" protId="K4DK40" geneId="TCSYLVIO_010494"/>
        <gene id="4478" protId="K4DR75" geneId="TCSYLVIO_008203"/>
        <gene id="4479" protId="K4DTV7" geneId="TCSYLVIO_007621"/>
        <gene id="4480" protId="K4E3K2" geneId="TCSYLVIO_003949"/>
        <gene id="4481" protId="K4E607" geneId="TCSYLVIO_002869"/>
        <gene id="4482" protId="K4DND1" geneId="TCSYLVIO_009484"/>
        <gene id="4483" protId="K4DVC3" geneId="TCSYLVIO_006759"/>
        <gene id="4484" protId="K4E7L1" geneId="TCSYLVIO_002485"/>
        <gene id="4485" protId="K4DJJ3" geneId="TCSYLVIO_010762"/>
        <gene id="4486" protId="K4DNS2" geneId="TCSYLVIO_009327"/>
        <gene id="4487" protId="K4ECB0" geneId="TCSYLVIO_000591"/>
        <gene id="4488" protId="K4E6X2" geneId="TCSYLVIO_002486"/>
        <gene id="4489" protId="K4DQ26" geneId="TCSYLVIO_008659"/>
        <gene id="4490" protId="K4DL56" geneId="TCSYLVIO_010196"/>
        <gene id="4491" protId="K4E6U4" geneId="TCSYLVIO_002513"/>
        <gene id="4492" protId="K4DL05" geneId="TCSYLVIO_010287"/>
        <gene id="4493" protId="K4DPQ7" geneId="TCSYLVIO_009004"/>
        <gene id="4494" protId="K4DMM2" geneId="TCSYLVIO_009541"/>
        <gene id="4495" protId="K4DNF8" geneId="TCSYLVIO_009401"/>
        <gene id="4496" protId="K4E7B5" geneId="TCSYLVIO_002488"/>
        <gene id="4497" protId="K4DKB8" geneId="TCSYLVIO_010391"/>
        <gene id="4498" protId="K4DJ96" geneId="TCSYLVIO_010759"/>
        <gene id="4499" protId="K4DPJ1" geneId="TCSYLVIO_008868"/>
        <gene id="4500" protId="K4ECL7" geneId="TCSYLVIO_000704"/>
        <gene id="4501" protId="K4DU41" geneId="TCSYLVIO_007364"/>
        <gene id="4507" protId="K4E4W7" geneId="TCSYLVIO_003271"/>
        <gene id="4510" protId="K4DVX2" geneId="TCSYLVIO_006468"/>
        <gene id="4512" protId="K4EED7" geneId="TCSYLVIO_000051"/>
        <gene id="4513" protId="K4EDP0" geneId="TCSYLVIO_000084"/>
        <gene id="4516" protId="K4DWF1" geneId="TCSYLVIO_006255"/>
        <gene id="4518" protId="K4DTL1" geneId="TCSYLVIO_007280"/>
        <gene id="4520" protId="K4DU99" geneId="TCSYLVIO_007286"/>
        <gene id="4522" protId="K4E296" geneId="TCSYLVIO_004301"/>
        <gene id="4524" protId="K4E0A9" geneId="TCSYLVIO_005347"/>
        <gene id="4526" protId="K4DZJ3" geneId="TCSYLVIO_005600"/>
        <gene id="4528" protId="K4E376" geneId="TCSYLVIO_003869"/>
        <gene id="4531" protId="K4DWN1" geneId="TCSYLVIO_006174"/>
        <gene id="4533" protId="K4E2X0" geneId="TCSYLVIO_003951"/>
        <gene id="4535" protId="K4EB48" geneId="TCSYLVIO_001039"/>
        <gene id="4537" protId="K4E191" geneId="TCSYLVIO_004796"/>
        <gene id="4542" protId="K4EE46" geneId="TCSYLVIO_000141"/>
        <gene id="4544" protId="K4DR41" geneId="TCSYLVIO_008329"/>
        <gene id="4545" protId="K4E3F4" geneId="TCSYLVIO_004227"/>
        <gene id="4548" protId="K4DVB4" geneId="TCSYLVIO_006770"/>
        <gene id="4551" protId="K4DJQ4" geneId="TCSYLVIO_010699"/>
        <gene id="4553" protId="K4DTT6" geneId="TCSYLVIO_007457"/>
        <gene id="4557" protId="K4DUB9" geneId="TCSYLVIO_007035"/>
        <gene id="4560" protId="K4EE92" geneId="TCSYLVIO_000038"/>
        <gene id="4562" protId="K4DWD8" geneId="TCSYLVIO_006406"/>
        <gene id="4564" protId="K4E8B7" geneId="TCSYLVIO_001989"/>
        <gene id="4566" protId="K4E4T0" geneId="TCSYLVIO_003277"/>
        <gene id="4568" protId="K4DJI6" geneId="TCSYLVIO_010670"/>
        <gene id="4570" protId="K4E0V4" geneId="TCSYLVIO_004677"/>
        <gene id="4572" protId="K4EAT4" geneId="TCSYLVIO_001158"/>
        <gene id="4576" protId="K4DXY3" geneId="TCSYLVIO_006159"/>
        <gene id="4578" protId="K4DNE8" geneId="TCSYLVIO_009411"/>
        <gene id="4579" protId="K4DM89" geneId="TCSYLVIO_009868"/>
        <gene id="4582" protId="K4E5M3" geneId="TCSYLVIO_003239"/>
        <gene id="4584" protId="K4DJX6" geneId="TCSYLVIO_010616"/>
        <gene id="4586" protId="K4E6F1" geneId="TCSYLVIO_003164"/>
        <gene id="4588" protId="K4E5U3" geneId="TCSYLVIO_002899"/>
        <gene id="4590" protId="K4ECW4" geneId="TCSYLVIO_000440"/>
        <gene id="4592" protId="K4DZE5" geneId="TCSYLVIO_005652"/>
        <gene id="4593" protId="K4DY77" geneId="TCSYLVIO_005615"/>
        <gene id="4595" protId="K4E6Y2" geneId="TCSYLVIO_002785"/>
        <gene id="4598" protId="K4DZ25" geneId="TCSYLVIO_005327"/>
        <gene id="4600" protId="K4E348" geneId="TCSYLVIO_004100"/>
        <gene id="4602" protId="K4E3V6" geneId="TCSYLVIO_004075"/>
        <gene id="4604" protId="K4E3S7" geneId="TCSYLVIO_003660"/>
        <gene id="4617" protId="K4E6H7" geneId="TCSYLVIO_002835"/>
        <gene id="4618" protId="K4DQD5" geneId="TCSYLVIO_008689"/>
        <gene id="4619" protId="K4DPR0" geneId="TCSYLVIO_008827"/>
        <gene id="4620" protId="K4DNU8" geneId="TCSYLVIO_009153"/>
        <gene id="4621" protId="K4DSQ3" geneId="TCSYLVIO_007615"/>
        <gene id="4622" protId="K4DUH2" geneId="TCSYLVIO_006956"/>
        <gene id="4623" protId="K4DSZ7" geneId="TCSYLVIO_007738"/>
        <gene id="4624" protId="K4E9D7" geneId="TCSYLVIO_001791"/>
        <gene id="4625" protId="K4DY69" geneId="TCSYLVIO_005902"/>
        <gene id="4626" protId="K4DSJ5" geneId="TCSYLVIO_007759"/>
        <gene id="4627" protId="K4DKK7" geneId="TCSYLVIO_010305"/>
        <gene id="4628" protId="K4DKD8" geneId="TCSYLVIO_010370"/>
        <gene id="4629" protId="K4DRL8" geneId="TCSYLVIO_008233"/>
        <gene id="4630" protId="K4E6V6" geneId="TCSYLVIO_002822"/>
        <gene id="4631" protId="K4DSP3" geneId="TCSYLVIO_007627"/>
        <gene id="4632" protId="K4DNH3" geneId="TCSYLVIO_009386"/>
        <gene id="4633" protId="K4ECP7" geneId="TCSYLVIO_000500"/>
        <gene id="4634" protId="K4DN25" geneId="TCSYLVIO_009524"/>
        <gene id="4635" protId="K4DU89" geneId="TCSYLVIO_007143"/>
        <gene id="4636" protId="K4DJI7" geneId="TCSYLVIO_010767"/>
        <gene id="4637" protId="K4EBR5" geneId="TCSYLVIO_000826"/>
        <gene id="4638" protId="K4EDQ9" geneId="TCSYLVIO_000064"/>
        <gene id="4639" protId="K4EB61" geneId="TCSYLVIO_000977"/>
        <gene id="4640" protId="K4E6W9" geneId="TCSYLVIO_002984"/>
        <gene id="4641" protId="K4E9X3" geneId="TCSYLVIO_001461"/>
        <gene id="4642" protId="K4E627" geneId="TCSYLVIO_002940"/>
        <gene id="4649" protId="K4EAX6" geneId="TCSYLVIO_001064"/>
        <gene id="4651" protId="K4DKA3" geneId="TCSYLVIO_010411"/>
        <gene id="4653" protId="K4E165" geneId="TCSYLVIO_005021"/>
        <gene id="4655" protId="K4EBP5" geneId="TCSYLVIO_000845"/>
        <gene id="4657" protId="K4DXT0" geneId="TCSYLVIO_006016"/>
        <gene id="4659" protId="K4E087" geneId="TCSYLVIO_004898"/>
        <gene id="4661" protId="K4DTV8" geneId="TCSYLVIO_007171"/>
        <gene id="4665" protId="K4DZT8" geneId="TCSYLVIO_005148"/>
        <gene id="4667" protId="K4EBK6" geneId="TCSYLVIO_001074"/>
        <gene id="4670" protId="K4DMK6" geneId="TCSYLVIO_009687"/>
        <gene id="4676" protId="K4DXV7" geneId="TCSYLVIO_006186"/>
        <gene id="4680" protId="K4DJR8" geneId="TCSYLVIO_010587"/>
        <gene id="4682" protId="K4DXX8" geneId="TCSYLVIO_006161"/>
        <gene id="4684" protId="K4DN18" geneId="TCSYLVIO_009372"/>
        <gene id="4686" protId="K4EAH1" geneId="TCSYLVIO_001372"/>
        <gene id="4692" protId="K4DIY0" geneId="TCSYLVIO_010870"/>
        <gene id="4693" protId="K4EDW1" geneId="TCSYLVIO_000167"/>
        <gene id="4696" protId="K4EC58" geneId="TCSYLVIO_001060"/>
        <gene id="4697" protId="K4E315" geneId="TCSYLVIO_004146"/>
        <gene id="4700" protId="K4DWA2" geneId="TCSYLVIO_006423"/>
        <gene id="4702" protId="K4DVL4" geneId="TCSYLVIO_006998"/>
        <gene id="4704" protId="K4DU74" geneId="TCSYLVIO_007314"/>
        <gene id="4706" protId="K4DJK5" geneId="TCSYLVIO_010791"/>
        <gene id="4708" protId="K4EE41" geneId="TCSYLVIO_000155"/>
        <gene id="4710" protId="K4EB89" geneId="TCSYLVIO_001403"/>
        <gene id="4712" protId="K4DZH7" geneId="TCSYLVIO_005187"/>
        <gene id="4714" protId="K4E683" geneId="TCSYLVIO_002825"/>
        <gene id="4720" protId="K4E453" geneId="TCSYLVIO_003536"/>
        <gene id="4722" protId="K4E1W8" geneId="TCSYLVIO_004408"/>
        <gene id="4723" protId="K4E3H9" geneId="TCSYLVIO_003723"/>
        <gene id="4724" protId="K4ECP3" geneId="TCSYLVIO_000452"/>
        <gene id="4727" protId="K4EAK4" geneId="TCSYLVIO_001193"/>
        <gene id="4729" protId="K4DPI3" geneId="TCSYLVIO_008925"/>
        <gene id="4730" protId="K4DPS8" geneId="TCSYLVIO_008924"/>
        <gene id="4731" protId="K4DPX4" geneId="TCSYLVIO_008926"/>
        <gene id="4733" protId="K4DYW0" geneId="TCSYLVIO_005605"/>
        <gene id="4734" protId="K4DY81" geneId="TCSYLVIO_005604"/>
        <gene id="4736" protId="K4E6Z2" geneId="TCSYLVIO_002956"/>
        <gene id="4738" protId="K4DLT2" geneId="TCSYLVIO_009811"/>
        <gene id="4740" protId="K4EDK1" geneId="TCSYLVIO_000209"/>
        <gene id="4744" protId="K4E4B3" geneId="TCSYLVIO_003698"/>
        <gene id="4745" protId="K4DVX4" geneId="TCSYLVIO_006918"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="T.cruzi" link="http://www.uniprot.org/taxonomy/5693"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
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      <score id="bit" value="3509"/>
      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="2950"/>
      <geneRef id="3">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="0.255"/>
      </geneRef>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="2941"/>
      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="4">
      <score id="bit" value="2835"/>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="5">
      <score id="bit" value="2741"/>
      <geneRef id="10">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="11">
        <score id="inparalog" value="0.265"/>
      </geneRef>
      <geneRef id="12">
        <score id="inparalog" value="0.262"/>
      </geneRef>
      <geneRef id="13">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="6">
      <score id="bit" value="2568"/>
      <geneRef id="14">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="15">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="7">
      <score id="bit" value="2176"/>
      <geneRef id="16">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="17">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="8">
      <score id="bit" value="1828"/>
      <geneRef id="18">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="19">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="9">
      <score id="bit" value="1473"/>
      <geneRef id="20">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="21">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="10">
      <score id="bit" value="1323"/>
      <geneRef id="22">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="23">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="11">
      <score id="bit" value="1295"/>
      <geneRef id="24">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="25">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="12">
      <score id="bit" value="1274"/>
      <geneRef id="26">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="27">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="13">
      <score id="bit" value="1270"/>
      <geneRef id="28">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="29">
        <score id="inparalog" value="0.78"/>
      </geneRef>
      <geneRef id="30">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="14">
      <score id="bit" value="1231"/>
      <geneRef id="31">
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