<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="476" inparalogs="1992"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Ailuropoda melanoleuca " NCBITaxId="9646">
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        <gene id="12" protId="G1M4L8" geneId="POLE"/>
        <gene id="14" protId="G1MAF6" geneId="LOC100470305"/>
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        <gene id="1936" protId="G1MMD8" geneId="LOC100481255"/>
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        <gene id="1950" protId="G1LUG9" geneId="LOC100470618"/>
        <gene id="1952" protId="G1M0Y1" geneId="uncharacterized_G1M0Y1"/>
        <gene id="1955" protId="D2HC73" geneId="TAGLN"/>
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        <gene id="1960" protId="D2HMD4" geneId="LOC100484955"/>
        <gene id="1962" protId="D2HV09" geneId="LOC100471793"/>
        <gene id="1963" protId="G1LH80" geneId="uncharacterized_G1LH80"/>
        <gene id="1964" protId="D2HRA6" geneId="RPUSD3"/>
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        <gene id="1971" protId="G1LXN0" geneId="PPAPDC1B"/>
        <gene id="1972" protId="G1LUR8" geneId="PPAPDC1A"/>
        <gene id="1975" protId="D2I2V2" geneId="CCNB1IP1"/>
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        <gene id="1981" protId="G1MGH2" geneId="LOC100481519"/>
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        <gene id="1983" protId="G1LL50" geneId="ACP2"/>
        <gene id="1984" protId="G1M2L4" geneId="LOC100466477"/>
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        <gene id="1989" protId="G1LHK9" geneId="RPS20"/>
        <gene id="1990" protId="G1MLC2" geneId="LOC100463721"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="A.melanoleuca" link="http://www.uniprot.org/taxonomy/9646"/>
    </notes>
  </species>
  <species name="Enterocytozoon bieneusi " NCBITaxId="481877">
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    <notes>
      <additionalInformation abbreviation="E.bieneusi" link="http://www.uniprot.org/taxonomy/481877"/>
    </notes>
  </species>
  <scores>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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