<?xml version="1.0" encoding="utf-8"?>
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  <notes>
    <stats ortholog_groups="2832" inparalogs="5821"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Ajellomyces capsulata " NCBITaxId="447093">
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    </database>
    <notes>
      <additionalInformation abbreviation="A.capsulata" link="http://www.uniprot.org/taxonomy/447093"/>
    </notes>
  </species>
  <species name="Torulaspora delbrueckii " NCBITaxId="1076872">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="5649" protId="G8ZLE5" geneId="TDEL0A01070"/>
        <gene id="5651" protId="G8ZVL9" geneId="TDEL0E04200"/>
        <gene id="5653" protId="G8ZNT3" geneId="TDEL0B01480"/>
        <gene id="5655" protId="G8ZP01" geneId="TDEL0B02160"/>
        <gene id="5657" protId="G8ZWJ0" geneId="TDEL0F01730"/>
        <gene id="5661" protId="G8ZX08" geneId="TDEL0F03410"/>
        <gene id="5663" protId="G8ZWZ9" geneId="TDEL0F03320"/>
        <gene id="5665" protId="G8ZVM3" geneId="TDEL0E04240"/>
        <gene id="5667" protId="G8ZX87" geneId="TDEL0F04200"/>
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        <gene id="5672" protId="G8ZVD2" geneId="TDEL0E03330"/>
        <gene id="5674" protId="G8ZW40" geneId="TDEL0F00230"/>
        <gene id="5676" protId="G8ZQF3" geneId="TDEL0B07180"/>
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        <gene id="5682" protId="G8ZPQ3" geneId="TDEL0B04680"/>
        <gene id="5684" protId="G8ZPE9" geneId="TDEL0B03640"/>
        <gene id="5686" protId="G8ZV66" geneId="TDEL0E02670"/>
        <gene id="5688" protId="G8ZUW4" geneId="TDEL0E01650"/>
        <gene id="5690" protId="G8ZLI7" geneId="TDEL0A01490"/>
        <gene id="5692" protId="G8ZXK6" geneId="TDEL0F05390"/>
        <gene id="5694" protId="G8ZT63" geneId="TDEL0D02230"/>
        <gene id="5696" protId="G8ZP66" geneId="TDEL0B02810"/>
        <gene id="5698" protId="G8ZWF2" geneId="TDEL0F01350"/>
        <gene id="5700" protId="G8ZNQ4" geneId="TDEL0B01190"/>
        <gene id="5702" protId="G8ZME8" geneId="TDEL0A04600"/>
        <gene id="5704" protId="G8ZWV6" geneId="TDEL0F02890"/>
        <gene id="5706" protId="G8ZX29" geneId="TDEL0F03620"/>
        <gene id="5708" protId="G8ZZ96" geneId="TDEL0H00810"/>
        <gene id="5710" protId="G8ZTM6" geneId="TDEL0D03860"/>
        <gene id="5712" protId="G8ZYR2" geneId="TDEL0G01700"/>
        <gene id="5714" protId="G8ZVN9" geneId="TDEL0E04400"/>
        <gene id="5716" protId="G8ZVY5" geneId="TDEL0E05360"/>
        <gene id="5718" protId="G8ZMR9" geneId="TDEL0A05810"/>
        <gene id="5720" protId="G8ZMZ7" geneId="TDEL0A06590"/>
        <gene id="5722" protId="G8ZSL9" geneId="TDEL0D00290"/>
        <gene id="5724" protId="G8ZT19" geneId="TDEL0D01790"/>
        <gene id="5726" protId="G8ZPS5" geneId="TDEL0B04900"/>
        <gene id="5728" protId="G8ZRV0" geneId="TDEL0C03530"/>
        <gene id="5730" protId="G8ZLD6" geneId="TDEL0A00980"/>
        <gene id="5732" protId="G8ZRB2" geneId="TDEL0C01650"/>
        <gene id="5734" protId="G8ZYX3" geneId="TDEL0G02310"/>
        <gene id="5736" protId="G8ZU25" geneId="TDEL0D05350"/>
        <gene id="5738" protId="G8ZQB7" geneId="TDEL0B06820"/>
        <gene id="5740" protId="G8ZRM4" geneId="TDEL0C02770"/>
        <gene id="5742" protId="G8ZX61" geneId="TDEL0F03940"/>
        <gene id="5744" protId="G8ZZC7" geneId="TDEL0H01120"/>
        <gene id="5746" protId="G8ZXB9" geneId="TDEL0F04520"/>
        <gene id="5748" protId="G8ZSF9" geneId="TDEL0C05620"/>
        <gene id="5750" protId="G8ZYY2" geneId="TDEL0G02400"/>
        <gene id="5752" protId="G8ZRJ9" geneId="TDEL0C02520"/>
        <gene id="5754" protId="G8ZMY0" geneId="TDEL0A06420"/>
        <gene id="5756" protId="G8ZSH5" geneId="TDEL0C05780"/>
        <gene id="5758" protId="G8ZVG3" geneId="TDEL0E03640"/>
        <gene id="5760" protId="G8ZRP8" geneId="TDEL0C03010"/>
        <gene id="5762" protId="G8ZNQ0" geneId="TDEL0B01150"/>
        <gene id="5764" protId="G8ZR86" geneId="TDEL0C01390"/>
        <gene id="5766" protId="G8ZZI1" geneId="TDEL0H01660"/>
        <gene id="5768" protId="G8ZX78" geneId="TDEL0F04110"/>
        <gene id="5770" protId="G8ZU39" geneId="TDEL0D05490"/>
        <gene id="5772" protId="G8ZSK8" geneId="TDEL0D00180"/>
        <gene id="5774" protId="G8ZUZ1" geneId="TDEL0E01920"/>
        <gene id="5776" protId="G8ZYB8" geneId="TDEL0G00260"/>
        <gene id="5778" protId="G8ZUY0" geneId="TDEL0E01810"/>
        <gene id="5780" protId="G8ZMM7" geneId="TDEL0A05390"/>
        <gene id="5782" protId="G8ZM88" geneId="TDEL0A04000"/>
        <gene id="5784" protId="G8ZSI5" geneId="TDEL0C05880"/>
        <gene id="5786" protId="G9A0A4" geneId="TDEL0H04390"/>
        <gene id="5788" protId="G8ZUR2" geneId="TDEL0E01130"/>
        <gene id="5790" protId="G8ZSB3" geneId="TDEL0C05160"/>
        <gene id="5792" protId="G8ZWI3" geneId="TDEL0F01660"/>
        <gene id="5794" protId="G8ZXD0" geneId="TDEL0F04630"/>
        <gene id="5796" protId="G8ZM10" geneId="TDEL0A03220"/>
        <gene id="5798" protId="G8ZZG5" geneId="TDEL0H01500"/>
        <gene id="5800" protId="G8ZVP2" geneId="TDEL0E04430"/>
        <gene id="5802" protId="G8ZXV4" geneId="TDEL0G03540"/>
        <gene id="5804" protId="G8ZLW8" geneId="TDEL0A02800"/>
        <gene id="5806" protId="G8ZSQ2" geneId="TDEL0D00620"/>
        <gene id="5808" protId="G8ZT81" geneId="TDEL0D02410"/>
        <gene id="5810" protId="G8ZQK9" geneId="TDEL0C06070"/>
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        <gene id="5814" protId="G8ZZM0" geneId="TDEL0H02050"/>
        <gene id="5817" protId="G8ZUF5" geneId="TDEL0D06650"/>
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        <gene id="5821" protId="G8ZUM4" geneId="TDEL0E00750"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="T.delbrueckii" link="http://www.uniprot.org/taxonomy/1076872"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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        <score id="inparalog" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    </orthologGroup>
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        <score id="inparalog" value="1"/>
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        <score id="bootstrap" value="1"/>
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