###################################
2063 groups of orthologs
4771 in-paralogs from R.communis
2383 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3109 bits
Score difference with first non-orthologous sequence - R.communis:3109 S.stipitis:3109

B9RV85              	100.00%		A3LYV9              	100.00%
Bootstrap support for B9RV85 as seed ortholog is 100%.
Bootstrap support for A3LYV9 as seed ortholog is 100%.

Group of orthologs #2. Best score 2228 bits
Score difference with first non-orthologous sequence - R.communis:1090 S.stipitis:2228

B9RII5              	100.00%		A3LQK2              	100.00%
Bootstrap support for B9RII5 as seed ortholog is 100%.
Bootstrap support for A3LQK2 as seed ortholog is 100%.

Group of orthologs #3. Best score 2029 bits
Score difference with first non-orthologous sequence - R.communis:1793 S.stipitis:2029

B9SXC0              	100.00%		A3GID7              	100.00%
Bootstrap support for B9SXC0 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #4. Best score 1844 bits
Score difference with first non-orthologous sequence - R.communis:1844 S.stipitis:1844

B9S5U3              	100.00%		A3LSZ4              	100.00%
Bootstrap support for B9S5U3 as seed ortholog is 100%.
Bootstrap support for A3LSZ4 as seed ortholog is 100%.

Group of orthologs #5. Best score 1569 bits
Score difference with first non-orthologous sequence - R.communis:1569 S.stipitis:1569

B9SSU6              	100.00%		A3LPB9              	100.00%
Bootstrap support for B9SSU6 as seed ortholog is 100%.
Bootstrap support for A3LPB9 as seed ortholog is 100%.

Group of orthologs #6. Best score 1547 bits
Score difference with first non-orthologous sequence - R.communis:1547 S.stipitis:1547

B9RJG2              	100.00%		A3GH39              	100.00%
Bootstrap support for B9RJG2 as seed ortholog is 100%.
Bootstrap support for A3GH39 as seed ortholog is 100%.

Group of orthologs #7. Best score 1536 bits
Score difference with first non-orthologous sequence - R.communis:1536 S.stipitis:1536

B9RLP5              	100.00%		A3LNR5              	100.00%
Bootstrap support for B9RLP5 as seed ortholog is 100%.
Bootstrap support for A3LNR5 as seed ortholog is 100%.

Group of orthologs #8. Best score 1521 bits
Score difference with first non-orthologous sequence - R.communis:1521 S.stipitis:1521

B9SQP2              	100.00%		A3LV67              	100.00%
Bootstrap support for B9SQP2 as seed ortholog is 100%.
Bootstrap support for A3LV67 as seed ortholog is 100%.

Group of orthologs #9. Best score 1502 bits
Score difference with first non-orthologous sequence - R.communis:881 S.stipitis:1502

B9RZ91              	100.00%		A3GFG5              	100.00%
Bootstrap support for B9RZ91 as seed ortholog is 100%.
Bootstrap support for A3GFG5 as seed ortholog is 100%.

Group of orthologs #10. Best score 1500 bits
Score difference with first non-orthologous sequence - R.communis:1500 S.stipitis:1500

B9RY79              	100.00%		A3GEY0              	100.00%
Bootstrap support for B9RY79 as seed ortholog is 100%.
Bootstrap support for A3GEY0 as seed ortholog is 100%.

Group of orthologs #11. Best score 1241 bits
Score difference with first non-orthologous sequence - R.communis:750 S.stipitis:1241

B9SHS2              	100.00%		A3LP81              	100.00%
Bootstrap support for B9SHS2 as seed ortholog is 100%.
Bootstrap support for A3LP81 as seed ortholog is 100%.

Group of orthologs #12. Best score 1227 bits
Score difference with first non-orthologous sequence - R.communis:1001 S.stipitis:1227

B9T0Q9              	100.00%		A3GEY3              	100.00%
Bootstrap support for B9T0Q9 as seed ortholog is 100%.
Bootstrap support for A3GEY3 as seed ortholog is 100%.

Group of orthologs #13. Best score 1188 bits
Score difference with first non-orthologous sequence - R.communis:1188 S.stipitis:1188

B9RWX6              	100.00%		A3LYF1              	100.00%
Bootstrap support for B9RWX6 as seed ortholog is 100%.
Bootstrap support for A3LYF1 as seed ortholog is 100%.

Group of orthologs #14. Best score 1181 bits
Score difference with first non-orthologous sequence - R.communis:1181 S.stipitis:69

B9SP24              	100.00%		A3LNC3              	100.00%
Bootstrap support for B9SP24 as seed ortholog is 100%.
Bootstrap support for A3LNC3 as seed ortholog is 83%.

Group of orthologs #15. Best score 1124 bits
Score difference with first non-orthologous sequence - R.communis:721 S.stipitis:658

B9S0I1              	100.00%		A3LQG9              	100.00%
B9S0I3              	96.19%		
B9RAY1              	62.92%		
Bootstrap support for B9S0I1 as seed ortholog is 100%.
Bootstrap support for A3LQG9 as seed ortholog is 100%.

Group of orthologs #16. Best score 1071 bits
Score difference with first non-orthologous sequence - R.communis:904 S.stipitis:917

B9SD38              	100.00%		A3LNB1              	100.00%
B9RI35              	95.83%		
Bootstrap support for B9SD38 as seed ortholog is 100%.
Bootstrap support for A3LNB1 as seed ortholog is 100%.

Group of orthologs #17. Best score 1055 bits
Score difference with first non-orthologous sequence - R.communis:1055 S.stipitis:169

B9SE90              	100.00%		A3LNA5              	100.00%
B9T7V1              	46.86%		
Bootstrap support for B9SE90 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 99%.

Group of orthologs #18. Best score 1048 bits
Score difference with first non-orthologous sequence - R.communis:879 S.stipitis:1048

B9SUT5              	100.00%		A3LTD7              	100.00%
Bootstrap support for B9SUT5 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #19. Best score 1021 bits
Score difference with first non-orthologous sequence - R.communis:1021 S.stipitis:1021

B9RHB0              	100.00%		A3LNZ5              	100.00%
B9SU35              	100.00%		
Bootstrap support for B9RHB0 as seed ortholog is 100%.
Bootstrap support for B9SU35 as seed ortholog is 100%.
Bootstrap support for A3LNZ5 as seed ortholog is 100%.

Group of orthologs #20. Best score 1007 bits
Score difference with first non-orthologous sequence - R.communis:1007 S.stipitis:1007

B9RRS7              	100.00%		A3LQC8              	100.00%
Bootstrap support for B9RRS7 as seed ortholog is 100%.
Bootstrap support for A3LQC8 as seed ortholog is 100%.

Group of orthologs #21. Best score 978 bits
Score difference with first non-orthologous sequence - R.communis:767 S.stipitis:978

B9SL65              	100.00%		A3LYS3              	100.00%
Bootstrap support for B9SL65 as seed ortholog is 100%.
Bootstrap support for A3LYS3 as seed ortholog is 100%.

Group of orthologs #22. Best score 958 bits
Score difference with first non-orthologous sequence - R.communis:515 S.stipitis:958

B9SR46              	100.00%		A3LZW8              	100.00%
Bootstrap support for B9SR46 as seed ortholog is 100%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #23. Best score 954 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:954

B9SPB9              	100.00%		A3LY83              	100.00%
Bootstrap support for B9SPB9 as seed ortholog is 84%.
Bootstrap support for A3LY83 as seed ortholog is 100%.

Group of orthologs #24. Best score 953 bits
Score difference with first non-orthologous sequence - R.communis:953 S.stipitis:953

B9S7P8              	100.00%		A3LYJ8              	100.00%
Bootstrap support for B9S7P8 as seed ortholog is 100%.
Bootstrap support for A3LYJ8 as seed ortholog is 100%.

Group of orthologs #25. Best score 951 bits
Score difference with first non-orthologous sequence - R.communis:951 S.stipitis:951

B9RPS7              	100.00%		A3LYU1              	100.00%
Bootstrap support for B9RPS7 as seed ortholog is 100%.
Bootstrap support for A3LYU1 as seed ortholog is 100%.

Group of orthologs #26. Best score 943 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:169

B9RGN2              	100.00%		A3GGW0              	100.00%
B9RGN3              	84.86%		A3LXD9              	43.62%
B9SR13              	51.14%		
B9T228              	50.29%		
B9SP17              	50.00%		
Bootstrap support for B9RGN2 as seed ortholog is 99%.
Bootstrap support for A3GGW0 as seed ortholog is 99%.

Group of orthologs #27. Best score 943 bits
Score difference with first non-orthologous sequence - R.communis:943 S.stipitis:943

B9SD95              	100.00%		A3LUA0              	100.00%
Bootstrap support for B9SD95 as seed ortholog is 100%.
Bootstrap support for A3LUA0 as seed ortholog is 100%.

Group of orthologs #28. Best score 943 bits
Score difference with first non-orthologous sequence - R.communis:359 S.stipitis:943

B9SWL0              	100.00%		A3LVX8              	100.00%
Bootstrap support for B9SWL0 as seed ortholog is 100%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #29. Best score 935 bits
Score difference with first non-orthologous sequence - R.communis:935 S.stipitis:935

B9SS25              	100.00%		F5Y6K2              	100.00%
Bootstrap support for B9SS25 as seed ortholog is 100%.
Bootstrap support for F5Y6K2 as seed ortholog is 100%.

Group of orthologs #30. Best score 923 bits
Score difference with first non-orthologous sequence - R.communis:256 S.stipitis:923

B9RIT0              	100.00%		A3LPD9              	100.00%
B9T1Q8              	65.51%		
B9RCG8              	64.43%		
Bootstrap support for B9RIT0 as seed ortholog is 100%.
Bootstrap support for A3LPD9 as seed ortholog is 100%.

Group of orthologs #31. Best score 906 bits
Score difference with first non-orthologous sequence - R.communis:906 S.stipitis:906

B9SIK7              	100.00%		A3LTJ7              	100.00%
Bootstrap support for B9SIK7 as seed ortholog is 100%.
Bootstrap support for A3LTJ7 as seed ortholog is 100%.

Group of orthologs #32. Best score 891 bits
Score difference with first non-orthologous sequence - R.communis:891 S.stipitis:891

B9SKB0              	100.00%		A3LV95              	100.00%
B9SZE7              	87.09%		
Bootstrap support for B9SKB0 as seed ortholog is 100%.
Bootstrap support for A3LV95 as seed ortholog is 100%.

Group of orthologs #33. Best score 883 bits
Score difference with first non-orthologous sequence - R.communis:883 S.stipitis:883

B9S6P3              	100.00%		A3LV05              	100.00%
Bootstrap support for B9S6P3 as seed ortholog is 100%.
Bootstrap support for A3LV05 as seed ortholog is 100%.

Group of orthologs #34. Best score 876 bits
Score difference with first non-orthologous sequence - R.communis:469 S.stipitis:876

B9SYR5              	100.00%		A3LRI3              	100.00%
Bootstrap support for B9SYR5 as seed ortholog is 100%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #35. Best score 867 bits
Score difference with first non-orthologous sequence - R.communis:597 S.stipitis:867

B9SVH7              	100.00%		A3LWA8              	100.00%
Bootstrap support for B9SVH7 as seed ortholog is 100%.
Bootstrap support for A3LWA8 as seed ortholog is 100%.

Group of orthologs #36. Best score 861 bits
Score difference with first non-orthologous sequence - R.communis:861 S.stipitis:861

B9S1Z9              	100.00%		A3GH27              	100.00%
Bootstrap support for B9S1Z9 as seed ortholog is 100%.
Bootstrap support for A3GH27 as seed ortholog is 100%.

Group of orthologs #37. Best score 860 bits
Score difference with first non-orthologous sequence - R.communis:607 S.stipitis:761

B9SWW3              	100.00%		A3GF06              	100.00%
Bootstrap support for B9SWW3 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 100%.

Group of orthologs #38. Best score 859 bits
Score difference with first non-orthologous sequence - R.communis:859 S.stipitis:859

B9SKU8              	100.00%		A3LQ33              	100.00%
B9SKZ1              	64.61%		
Bootstrap support for B9SKU8 as seed ortholog is 100%.
Bootstrap support for A3LQ33 as seed ortholog is 100%.

Group of orthologs #39. Best score 850 bits
Score difference with first non-orthologous sequence - R.communis:223 S.stipitis:412

B9RNA6              	100.00%		A3LP11              	100.00%
Bootstrap support for B9RNA6 as seed ortholog is 99%.
Bootstrap support for A3LP11 as seed ortholog is 100%.

Group of orthologs #40. Best score 850 bits
Score difference with first non-orthologous sequence - R.communis:719 S.stipitis:850

B9RVN3              	100.00%		A3GF24              	100.00%
Bootstrap support for B9RVN3 as seed ortholog is 100%.
Bootstrap support for A3GF24 as seed ortholog is 100%.

Group of orthologs #41. Best score 843 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:118

B9SKU0              	100.00%		A3LPF9              	100.00%
B9SKU1              	68.68%		A3LYW5              	10.87%
                    	       		A3LNZ8              	9.00%
                    	       		A3LQB3              	8.95%
                    	       		A3LWA2              	8.27%
Bootstrap support for B9SKU0 as seed ortholog is 87%.
Bootstrap support for A3LPF9 as seed ortholog is 89%.

Group of orthologs #42. Best score 837 bits
Score difference with first non-orthologous sequence - R.communis:420 S.stipitis:837

B9RT10              	100.00%		A3LQ23              	100.00%
                    	       		A3GFQ5              	9.26%
Bootstrap support for B9RT10 as seed ortholog is 100%.
Bootstrap support for A3LQ23 as seed ortholog is 100%.

Group of orthologs #43. Best score 816 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:108

B9S2G0              	100.00%		A3LZJ0              	100.00%
B9S5W0              	8.91%		
B9SF77              	8.18%		
B9RE61              	8.00%		
B9RLA0              	7.94%		
Bootstrap support for B9S2G0 as seed ortholog is 97%.
Bootstrap support for A3LZJ0 as seed ortholog is 92%.

Group of orthologs #44. Best score 791 bits
Score difference with first non-orthologous sequence - R.communis:791 S.stipitis:498

B9RHM6              	100.00%		A3LVX3              	100.00%
Bootstrap support for B9RHM6 as seed ortholog is 100%.
Bootstrap support for A3LVX3 as seed ortholog is 100%.

Group of orthologs #45. Best score 780 bits
Score difference with first non-orthologous sequence - R.communis:780 S.stipitis:780

B9RCF1              	100.00%		A3LQY8              	100.00%
Bootstrap support for B9RCF1 as seed ortholog is 100%.
Bootstrap support for A3LQY8 as seed ortholog is 100%.

Group of orthologs #46. Best score 777 bits
Score difference with first non-orthologous sequence - R.communis:549 S.stipitis:777

B9R9T8              	100.00%		A3LU44              	100.00%
Bootstrap support for B9R9T8 as seed ortholog is 100%.
Bootstrap support for A3LU44 as seed ortholog is 100%.

Group of orthologs #47. Best score 768 bits
Score difference with first non-orthologous sequence - R.communis:768 S.stipitis:768

B9S438              	100.00%		A3M0P3              	100.00%
Bootstrap support for B9S438 as seed ortholog is 100%.
Bootstrap support for A3M0P3 as seed ortholog is 100%.

Group of orthologs #48. Best score 765 bits
Score difference with first non-orthologous sequence - R.communis:765 S.stipitis:765

B9SQC0              	100.00%		A3LTA6              	100.00%
Bootstrap support for B9SQC0 as seed ortholog is 100%.
Bootstrap support for A3LTA6 as seed ortholog is 100%.

Group of orthologs #49. Best score 762 bits
Score difference with first non-orthologous sequence - R.communis:120 S.stipitis:166

B9RX55              	100.00%		A3LYI6              	100.00%
Bootstrap support for B9RX55 as seed ortholog is 99%.
Bootstrap support for A3LYI6 as seed ortholog is 99%.

Group of orthologs #50. Best score 759 bits
Score difference with first non-orthologous sequence - R.communis:75 S.stipitis:759

B9SJB6              	100.00%		A3LWF3              	100.00%
B9RCW0              	59.72%		
B9S366              	29.78%		
Bootstrap support for B9SJB6 as seed ortholog is 87%.
Bootstrap support for A3LWF3 as seed ortholog is 100%.

Group of orthologs #51. Best score 759 bits
Score difference with first non-orthologous sequence - R.communis:276 S.stipitis:759

B9S370              	100.00%		A3LZ34              	100.00%
Bootstrap support for B9S370 as seed ortholog is 99%.
Bootstrap support for A3LZ34 as seed ortholog is 100%.

Group of orthologs #52. Best score 757 bits
Score difference with first non-orthologous sequence - R.communis:757 S.stipitis:757

B9RAM8              	100.00%		A3LPZ7              	100.00%
Bootstrap support for B9RAM8 as seed ortholog is 100%.
Bootstrap support for A3LPZ7 as seed ortholog is 100%.

Group of orthologs #53. Best score 754 bits
Score difference with first non-orthologous sequence - R.communis:212 S.stipitis:754

B9RLP7              	100.00%		A3LYX5              	100.00%
Bootstrap support for B9RLP7 as seed ortholog is 99%.
Bootstrap support for A3LYX5 as seed ortholog is 100%.

Group of orthologs #54. Best score 753 bits
Score difference with first non-orthologous sequence - R.communis:753 S.stipitis:753

B9SK20              	100.00%		A3M0G6              	100.00%
Bootstrap support for B9SK20 as seed ortholog is 100%.
Bootstrap support for A3M0G6 as seed ortholog is 100%.

Group of orthologs #55. Best score 752 bits
Score difference with first non-orthologous sequence - R.communis:485 S.stipitis:752

B9RG29              	100.00%		A3M0C1              	100.00%
Bootstrap support for B9RG29 as seed ortholog is 100%.
Bootstrap support for A3M0C1 as seed ortholog is 100%.

Group of orthologs #56. Best score 749 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:749

B9SJA7              	100.00%		A3LN85              	100.00%
B9RNX1              	48.46%		
Bootstrap support for B9SJA7 as seed ortholog is 99%.
Bootstrap support for A3LN85 as seed ortholog is 100%.

Group of orthologs #57. Best score 733 bits
Score difference with first non-orthologous sequence - R.communis:733 S.stipitis:733

B9RVT9              	100.00%		A3GHV9              	100.00%
Bootstrap support for B9RVT9 as seed ortholog is 100%.
Bootstrap support for A3GHV9 as seed ortholog is 100%.

Group of orthologs #58. Best score 728 bits
Score difference with first non-orthologous sequence - R.communis:371 S.stipitis:391

B9SBN6              	100.00%		A3LYG2              	100.00%
Bootstrap support for B9SBN6 as seed ortholog is 100%.
Bootstrap support for A3LYG2 as seed ortholog is 100%.

Group of orthologs #59. Best score 725 bits
Score difference with first non-orthologous sequence - R.communis:448 S.stipitis:336

B9S4M4              	100.00%		A3LWK8              	100.00%
Bootstrap support for B9S4M4 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 100%.

Group of orthologs #60. Best score 721 bits
Score difference with first non-orthologous sequence - R.communis:721 S.stipitis:721

B9SDY9              	100.00%		A3LP60              	100.00%
B9T4L5              	84.71%		
Bootstrap support for B9SDY9 as seed ortholog is 100%.
Bootstrap support for A3LP60 as seed ortholog is 100%.

Group of orthologs #61. Best score 717 bits
Score difference with first non-orthologous sequence - R.communis:239 S.stipitis:580

B9R8F3              	100.00%		A3LY21              	100.00%
Bootstrap support for B9R8F3 as seed ortholog is 100%.
Bootstrap support for A3LY21 as seed ortholog is 100%.

Group of orthologs #62. Best score 711 bits
Score difference with first non-orthologous sequence - R.communis:544 S.stipitis:711

B9T8E6              	100.00%		A3LP29              	100.00%
Bootstrap support for B9T8E6 as seed ortholog is 100%.
Bootstrap support for A3LP29 as seed ortholog is 100%.

Group of orthologs #63. Best score 709 bits
Score difference with first non-orthologous sequence - R.communis:709 S.stipitis:709

B9SQ25              	100.00%		A3LPM4              	100.00%
Bootstrap support for B9SQ25 as seed ortholog is 100%.
Bootstrap support for A3LPM4 as seed ortholog is 100%.

Group of orthologs #64. Best score 703 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:703

B9S7I4              	100.00%		A3GI45              	100.00%
B9RK43              	71.70%		
B9REP0              	53.03%		
B9RWS3              	50.58%		
B9S596              	46.97%		
B9RQX7              	41.35%		
B9S4V9              	32.89%		
Bootstrap support for B9S7I4 as seed ortholog is 97%.
Bootstrap support for A3GI45 as seed ortholog is 100%.

Group of orthologs #65. Best score 703 bits
Score difference with first non-orthologous sequence - R.communis:167 S.stipitis:348

B9RVY0              	100.00%		A3GHT9              	100.00%
Bootstrap support for B9RVY0 as seed ortholog is 99%.
Bootstrap support for A3GHT9 as seed ortholog is 100%.

Group of orthologs #66. Best score 703 bits
Score difference with first non-orthologous sequence - R.communis:352 S.stipitis:376

B9T6H9              	100.00%		A3LP57              	100.00%
Bootstrap support for B9T6H9 as seed ortholog is 100%.
Bootstrap support for A3LP57 as seed ortholog is 100%.

Group of orthologs #67. Best score 699 bits
Score difference with first non-orthologous sequence - R.communis:578 S.stipitis:582

B9T2N2              	100.00%		A3LU88              	100.00%
Bootstrap support for B9T2N2 as seed ortholog is 100%.
Bootstrap support for A3LU88 as seed ortholog is 100%.

Group of orthologs #68. Best score 698 bits
Score difference with first non-orthologous sequence - R.communis:698 S.stipitis:698

B9RV10              	100.00%		A3GH45              	100.00%
Bootstrap support for B9RV10 as seed ortholog is 100%.
Bootstrap support for A3GH45 as seed ortholog is 100%.

Group of orthologs #69. Best score 695 bits
Score difference with first non-orthologous sequence - R.communis:406 S.stipitis:533

B9R9A9              	100.00%		A3LX42              	100.00%
B9RC96              	100.00%		
B9S382              	85.78%		
B9SB78              	82.22%		
B9SB14              	79.56%		
B9SPG2              	76.00%		
B9R897              	75.11%		
B9T1H5              	69.78%		
B9RCB7              	67.11%		
B9SB77              	36.89%		
Bootstrap support for B9R9A9 as seed ortholog is 100%.
Bootstrap support for B9RC96 as seed ortholog is 100%.
Bootstrap support for A3LX42 as seed ortholog is 100%.

Group of orthologs #70. Best score 691 bits
Score difference with first non-orthologous sequence - R.communis:21 S.stipitis:691

B9RL89              	100.00%		A3LRN4              	100.00%
Bootstrap support for B9RL89 as seed ortholog is 64%.
Alternative seed ortholog is B9RKK0 (21 bits away from this cluster)
Bootstrap support for A3LRN4 as seed ortholog is 100%.

Group of orthologs #71. Best score 690 bits
Score difference with first non-orthologous sequence - R.communis:585 S.stipitis:690

B9T118              	100.00%		A3GGW5              	100.00%
Bootstrap support for B9T118 as seed ortholog is 100%.
Bootstrap support for A3GGW5 as seed ortholog is 100%.

Group of orthologs #72. Best score 690 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:547

B9T1V8              	100.00%		A3LST8              	100.00%
Bootstrap support for B9T1V8 as seed ortholog is 94%.
Bootstrap support for A3LST8 as seed ortholog is 100%.

Group of orthologs #73. Best score 689 bits
Score difference with first non-orthologous sequence - R.communis:266 S.stipitis:471

B9SPV9              	100.00%		A3LQC6              	100.00%
B9RWF4              	97.22%		
B9SPV1              	5.09%		
Bootstrap support for B9SPV9 as seed ortholog is 100%.
Bootstrap support for A3LQC6 as seed ortholog is 100%.

Group of orthologs #74. Best score 688 bits
Score difference with first non-orthologous sequence - R.communis:422 S.stipitis:483

B9S6W9              	100.00%		A3GHZ1              	100.00%
Bootstrap support for B9S6W9 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 100%.

Group of orthologs #75. Best score 688 bits
Score difference with first non-orthologous sequence - R.communis:351 S.stipitis:688

B9SV29              	100.00%		A3LSJ3              	100.00%
Bootstrap support for B9SV29 as seed ortholog is 100%.
Bootstrap support for A3LSJ3 as seed ortholog is 100%.

Group of orthologs #76. Best score 678 bits
Score difference with first non-orthologous sequence - R.communis:678 S.stipitis:678

B9RQ33              	100.00%		A3LVA0              	100.00%
B9SI90              	75.27%		
Bootstrap support for B9RQ33 as seed ortholog is 100%.
Bootstrap support for A3LVA0 as seed ortholog is 100%.

Group of orthologs #77. Best score 676 bits
Score difference with first non-orthologous sequence - R.communis:238 S.stipitis:676

B9R8M9              	100.00%		A3LQS2              	100.00%
B9T792              	12.52%		
Bootstrap support for B9R8M9 as seed ortholog is 100%.
Bootstrap support for A3LQS2 as seed ortholog is 100%.

Group of orthologs #78. Best score 674 bits
Score difference with first non-orthologous sequence - R.communis:375 S.stipitis:674

B9RNE8              	100.00%		A3LTZ2              	100.00%
Bootstrap support for B9RNE8 as seed ortholog is 100%.
Bootstrap support for A3LTZ2 as seed ortholog is 100%.

Group of orthologs #79. Best score 670 bits
Score difference with first non-orthologous sequence - R.communis:591 S.stipitis:670

B9SF60              	100.00%		A3LQE3              	100.00%
Bootstrap support for B9SF60 as seed ortholog is 100%.
Bootstrap support for A3LQE3 as seed ortholog is 100%.

Group of orthologs #80. Best score 669 bits
Score difference with first non-orthologous sequence - R.communis:669 S.stipitis:669

B9RYP7              	100.00%		A3LN60              	100.00%
B9RYQ0              	36.86%		
B9RYP8              	9.84%		
Bootstrap support for B9RYP7 as seed ortholog is 100%.
Bootstrap support for A3LN60 as seed ortholog is 100%.

Group of orthologs #81. Best score 667 bits
Score difference with first non-orthologous sequence - R.communis:667 S.stipitis:667

B9RWL5              	100.00%		A3LQP2              	100.00%
Bootstrap support for B9RWL5 as seed ortholog is 100%.
Bootstrap support for A3LQP2 as seed ortholog is 100%.

Group of orthologs #82. Best score 666 bits
Score difference with first non-orthologous sequence - R.communis:574 S.stipitis:666

B9RMR9              	100.00%		A3LYE9              	100.00%
Bootstrap support for B9RMR9 as seed ortholog is 100%.
Bootstrap support for A3LYE9 as seed ortholog is 100%.

Group of orthologs #83. Best score 663 bits
Score difference with first non-orthologous sequence - R.communis:411 S.stipitis:663

B9S137              	100.00%		A3LT63              	100.00%
Bootstrap support for B9S137 as seed ortholog is 100%.
Bootstrap support for A3LT63 as seed ortholog is 100%.

Group of orthologs #84. Best score 662 bits
Score difference with first non-orthologous sequence - R.communis:431 S.stipitis:514

B9RUP7              	100.00%		A3LTP2              	100.00%
B9S7Y8              	94.53%		
B9R6R7              	93.75%		
B9T1E6              	76.95%		
B9SHE7              	73.05%		
Bootstrap support for B9RUP7 as seed ortholog is 100%.
Bootstrap support for A3LTP2 as seed ortholog is 100%.

Group of orthologs #85. Best score 662 bits
Score difference with first non-orthologous sequence - R.communis:573 S.stipitis:662

B9SS36              	100.00%		A3LZ90              	100.00%
Bootstrap support for B9SS36 as seed ortholog is 100%.
Bootstrap support for A3LZ90 as seed ortholog is 100%.

Group of orthologs #86. Best score 661 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:174

B9RRN0              	100.00%		A3GFA2              	100.00%
B9SKJ9              	40.63%		
Bootstrap support for B9RRN0 as seed ortholog is 98%.
Bootstrap support for A3GFA2 as seed ortholog is 99%.

Group of orthologs #87. Best score 661 bits
Score difference with first non-orthologous sequence - R.communis:244 S.stipitis:661

B9RR13              	100.00%		A3GFY8              	100.00%
Bootstrap support for B9RR13 as seed ortholog is 100%.
Bootstrap support for A3GFY8 as seed ortholog is 100%.

Group of orthologs #88. Best score 658 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:264

B9SXJ2              	100.00%		A3GI55              	100.00%
B9S875              	86.00%		
Bootstrap support for B9SXJ2 as seed ortholog is 100%.
Bootstrap support for A3GI55 as seed ortholog is 100%.

Group of orthologs #89. Best score 651 bits
Score difference with first non-orthologous sequence - R.communis:651 S.stipitis:651

B9RMI6              	100.00%		A3LU95              	100.00%
Bootstrap support for B9RMI6 as seed ortholog is 100%.
Bootstrap support for A3LU95 as seed ortholog is 100%.

Group of orthologs #90. Best score 649 bits
Score difference with first non-orthologous sequence - R.communis:649 S.stipitis:649

B9T1I5              	100.00%		A3LN88              	100.00%
B9S2D7              	38.31%		
Bootstrap support for B9T1I5 as seed ortholog is 100%.
Bootstrap support for A3LN88 as seed ortholog is 100%.

Group of orthologs #91. Best score 648 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:648

B9RWQ2              	100.00%		A3LXU1              	100.00%
B9S582              	76.58%		
B9SN32              	31.76%		
Bootstrap support for B9RWQ2 as seed ortholog is 99%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #92. Best score 646 bits
Score difference with first non-orthologous sequence - R.communis:348 S.stipitis:646

B9RHA7              	100.00%		A3GHX5              	100.00%
Bootstrap support for B9RHA7 as seed ortholog is 100%.
Bootstrap support for A3GHX5 as seed ortholog is 100%.

Group of orthologs #93. Best score 641 bits
Score difference with first non-orthologous sequence - R.communis:641 S.stipitis:641

B9RKV2              	100.00%		A3LVS2              	100.00%
B9RNH4              	34.03%		
Bootstrap support for B9RKV2 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #94. Best score 638 bits
Score difference with first non-orthologous sequence - R.communis:638 S.stipitis:638

B9RDE3              	100.00%		A3GHG4              	100.00%
B9RR10              	11.27%		
Bootstrap support for B9RDE3 as seed ortholog is 100%.
Bootstrap support for A3GHG4 as seed ortholog is 100%.

Group of orthologs #95. Best score 636 bits
Score difference with first non-orthologous sequence - R.communis:568 S.stipitis:174

B9RDA1              	100.00%		P34736              	100.00%
B9T0B2              	8.72%		
Bootstrap support for B9RDA1 as seed ortholog is 100%.
Bootstrap support for P34736 as seed ortholog is 99%.

Group of orthologs #96. Best score 631 bits
Score difference with first non-orthologous sequence - R.communis:631 S.stipitis:631

B9S9V5              	100.00%		A3LNA3              	100.00%
B9SMZ3              	27.16%		
Bootstrap support for B9S9V5 as seed ortholog is 100%.
Bootstrap support for A3LNA3 as seed ortholog is 100%.

Group of orthologs #97. Best score 630 bits
Score difference with first non-orthologous sequence - R.communis:378 S.stipitis:447

B9ST86              	100.00%		A3LNR6              	100.00%
Bootstrap support for B9ST86 as seed ortholog is 100%.
Bootstrap support for A3LNR6 as seed ortholog is 100%.

Group of orthologs #98. Best score 625 bits
Score difference with first non-orthologous sequence - R.communis:317 S.stipitis:625

B9T1A8              	100.00%		A3M0D4              	100.00%
Bootstrap support for B9T1A8 as seed ortholog is 100%.
Bootstrap support for A3M0D4 as seed ortholog is 100%.

Group of orthologs #99. Best score 624 bits
Score difference with first non-orthologous sequence - R.communis:563 S.stipitis:624

B9SUJ3              	100.00%		A3LNN0              	100.00%
Bootstrap support for B9SUJ3 as seed ortholog is 100%.
Bootstrap support for A3LNN0 as seed ortholog is 100%.

Group of orthologs #100. Best score 623 bits
Score difference with first non-orthologous sequence - R.communis:623 S.stipitis:623

B9R6Q4              	100.00%		A3LS00              	100.00%
B9SSD5              	71.35%		
B9SSD1              	14.74%		
Bootstrap support for B9R6Q4 as seed ortholog is 100%.
Bootstrap support for A3LS00 as seed ortholog is 100%.

Group of orthologs #101. Best score 623 bits
Score difference with first non-orthologous sequence - R.communis:356 S.stipitis:623

B9RM60              	100.00%		A3LUH0              	100.00%
Bootstrap support for B9RM60 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #102. Best score 621 bits
Score difference with first non-orthologous sequence - R.communis:621 S.stipitis:621

B9RF68              	100.00%		A3LPZ9              	100.00%
Bootstrap support for B9RF68 as seed ortholog is 100%.
Bootstrap support for A3LPZ9 as seed ortholog is 100%.

Group of orthologs #103. Best score 621 bits
Score difference with first non-orthologous sequence - R.communis:361 S.stipitis:621

B9SC12              	100.00%		A3LW17              	100.00%
Bootstrap support for B9SC12 as seed ortholog is 100%.
Bootstrap support for A3LW17 as seed ortholog is 100%.

Group of orthologs #104. Best score 618 bits
Score difference with first non-orthologous sequence - R.communis:220 S.stipitis:618

B9SBQ8              	100.00%		A3GFP7              	100.00%
B9SBQ9              	37.90%		
Bootstrap support for B9SBQ8 as seed ortholog is 100%.
Bootstrap support for A3GFP7 as seed ortholog is 100%.

Group of orthologs #105. Best score 618 bits
Score difference with first non-orthologous sequence - R.communis:531 S.stipitis:618

B9S339              	100.00%		A3GGF2              	100.00%
Bootstrap support for B9S339 as seed ortholog is 100%.
Bootstrap support for A3GGF2 as seed ortholog is 100%.

Group of orthologs #106. Best score 616 bits
Score difference with first non-orthologous sequence - R.communis:351 S.stipitis:616

B9SJQ0              	100.00%		A3LNG1              	100.00%
B9S579              	38.13%		
Bootstrap support for B9SJQ0 as seed ortholog is 100%.
Bootstrap support for A3LNG1 as seed ortholog is 100%.

Group of orthologs #107. Best score 616 bits
Score difference with first non-orthologous sequence - R.communis:616 S.stipitis:616

B9SAW4              	100.00%		A3M058              	100.00%
                    	       		A3GEV9              	34.58%
Bootstrap support for B9SAW4 as seed ortholog is 100%.
Bootstrap support for A3M058 as seed ortholog is 100%.

Group of orthologs #108. Best score 615 bits
Score difference with first non-orthologous sequence - R.communis:615 S.stipitis:615

B9R8N7              	100.00%		A3GGU6              	100.00%
Bootstrap support for B9R8N7 as seed ortholog is 100%.
Bootstrap support for A3GGU6 as seed ortholog is 100%.

Group of orthologs #109. Best score 614 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:614

B9SYC0              	100.00%		A3LMU7              	100.00%
                    	       		A3LNZ1              	100.00%
Bootstrap support for B9SYC0 as seed ortholog is 100%.
Bootstrap support for A3LMU7 as seed ortholog is 100%.
Bootstrap support for A3LNZ1 as seed ortholog is 100%.

Group of orthologs #110. Best score 611 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:611

B9SYQ4              	100.00%		A3LXK9              	100.00%
Bootstrap support for B9SYQ4 as seed ortholog is 78%.
Bootstrap support for A3LXK9 as seed ortholog is 100%.

Group of orthologs #111. Best score 607 bits
Score difference with first non-orthologous sequence - R.communis:281 S.stipitis:607

B9RGS6              	100.00%		A3LXD8              	100.00%
                    	       		A3LW76              	31.71%
Bootstrap support for B9RGS6 as seed ortholog is 100%.
Bootstrap support for A3LXD8 as seed ortholog is 100%.

Group of orthologs #112. Best score 605 bits
Score difference with first non-orthologous sequence - R.communis:521 S.stipitis:605

B9RSN1              	100.00%		A3GEY9              	100.00%
Bootstrap support for B9RSN1 as seed ortholog is 100%.
Bootstrap support for A3GEY9 as seed ortholog is 100%.

Group of orthologs #113. Best score 604 bits
Score difference with first non-orthologous sequence - R.communis:604 S.stipitis:604

B9SH22              	100.00%		A3LPC5              	100.00%
Bootstrap support for B9SH22 as seed ortholog is 100%.
Bootstrap support for A3LPC5 as seed ortholog is 100%.

Group of orthologs #114. Best score 602 bits
Score difference with first non-orthologous sequence - R.communis:602 S.stipitis:602

B9STU2              	100.00%		A3LZG4              	100.00%
Bootstrap support for B9STU2 as seed ortholog is 100%.
Bootstrap support for A3LZG4 as seed ortholog is 100%.

Group of orthologs #115. Best score 601 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:382

B9SN43              	100.00%		A3LQW7              	100.00%
Bootstrap support for B9SN43 as seed ortholog is 99%.
Bootstrap support for A3LQW7 as seed ortholog is 100%.

Group of orthologs #116. Best score 599 bits
Score difference with first non-orthologous sequence - R.communis:599 S.stipitis:599

B9S500              	100.00%		A3LNS2              	100.00%
B9RWD7              	16.86%		
Bootstrap support for B9S500 as seed ortholog is 100%.
Bootstrap support for A3LNS2 as seed ortholog is 100%.

Group of orthologs #117. Best score 599 bits
Score difference with first non-orthologous sequence - R.communis:280 S.stipitis:513

B9SCH6              	100.00%		A3LTX5              	100.00%
Bootstrap support for B9SCH6 as seed ortholog is 100%.
Bootstrap support for A3LTX5 as seed ortholog is 100%.

Group of orthologs #118. Best score 596 bits
Score difference with first non-orthologous sequence - R.communis:261 S.stipitis:330

B9SY11              	100.00%		A3GEX5              	100.00%
Bootstrap support for B9SY11 as seed ortholog is 99%.
Bootstrap support for A3GEX5 as seed ortholog is 100%.

Group of orthologs #119. Best score 594 bits
Score difference with first non-orthologous sequence - R.communis:421 S.stipitis:440

B9RPP6              	100.00%		A3LWX5              	100.00%
Bootstrap support for B9RPP6 as seed ortholog is 100%.
Bootstrap support for A3LWX5 as seed ortholog is 100%.

Group of orthologs #120. Best score 594 bits
Score difference with first non-orthologous sequence - R.communis:455 S.stipitis:458

B9RUN8              	100.00%		A3LW22              	100.00%
Bootstrap support for B9RUN8 as seed ortholog is 100%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #121. Best score 593 bits
Score difference with first non-orthologous sequence - R.communis:397 S.stipitis:285

B9RWZ4              	100.00%		A3LP26              	100.00%
B9RKV6              	58.72%		
B9RTI7              	30.58%		
B9RTI6              	30.38%		
B9REP5              	27.34%		
B9REP4              	25.63%		
B9T1L0              	21.14%		
B9SCP3              	20.15%		
B9R709              	13.74%		
B9S4P5              	11.49%		
B9SGZ9              	11.43%		
B9SH00              	10.77%		
Bootstrap support for B9RWZ4 as seed ortholog is 100%.
Bootstrap support for A3LP26 as seed ortholog is 99%.

Group of orthologs #122. Best score 593 bits
Score difference with first non-orthologous sequence - R.communis:593 S.stipitis:593

B9SUS2              	100.00%		A3LXB5              	100.00%
Bootstrap support for B9SUS2 as seed ortholog is 100%.
Bootstrap support for A3LXB5 as seed ortholog is 100%.

Group of orthologs #123. Best score 592 bits
Score difference with first non-orthologous sequence - R.communis:592 S.stipitis:592

B9SCX8              	100.00%		A3GEZ1              	100.00%
Bootstrap support for B9SCX8 as seed ortholog is 100%.
Bootstrap support for A3GEZ1 as seed ortholog is 100%.

Group of orthologs #124. Best score 592 bits
Score difference with first non-orthologous sequence - R.communis:592 S.stipitis:592

B9SC90              	100.00%		A3GHL1              	100.00%
Bootstrap support for B9SC90 as seed ortholog is 100%.
Bootstrap support for A3GHL1 as seed ortholog is 100%.

Group of orthologs #125. Best score 591 bits
Score difference with first non-orthologous sequence - R.communis:302 S.stipitis:288

B9RDP2              	100.00%		A3LWX3              	100.00%
Bootstrap support for B9RDP2 as seed ortholog is 100%.
Bootstrap support for A3LWX3 as seed ortholog is 100%.

Group of orthologs #126. Best score 588 bits
Score difference with first non-orthologous sequence - R.communis:497 S.stipitis:588

B9R8I3              	100.00%		A3LTV5              	100.00%
Bootstrap support for B9R8I3 as seed ortholog is 100%.
Bootstrap support for A3LTV5 as seed ortholog is 100%.

Group of orthologs #127. Best score 587 bits
Score difference with first non-orthologous sequence - R.communis:452 S.stipitis:587

B9RT52              	100.00%		A3M0F1              	100.00%
Bootstrap support for B9RT52 as seed ortholog is 100%.
Bootstrap support for A3M0F1 as seed ortholog is 100%.

Group of orthologs #128. Best score 586 bits
Score difference with first non-orthologous sequence - R.communis:586 S.stipitis:586

B9RFS6              	100.00%		A3LWB3              	100.00%
Bootstrap support for B9RFS6 as seed ortholog is 100%.
Bootstrap support for A3LWB3 as seed ortholog is 100%.

Group of orthologs #129. Best score 580 bits
Score difference with first non-orthologous sequence - R.communis:580 S.stipitis:580

B9T506              	100.00%		A3GF17              	100.00%
B9RFP6              	65.58%		
Bootstrap support for B9T506 as seed ortholog is 100%.
Bootstrap support for A3GF17 as seed ortholog is 100%.

Group of orthologs #130. Best score 579 bits
Score difference with first non-orthologous sequence - R.communis:579 S.stipitis:579

B9RG42              	100.00%		A3GG50              	100.00%
B9RGS5              	24.04%		
Bootstrap support for B9RG42 as seed ortholog is 100%.
Bootstrap support for A3GG50 as seed ortholog is 100%.

Group of orthologs #131. Best score 579 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:6

B9SMX7              	100.00%		A3LY87              	100.00%
B9SMK7              	70.00%		
Bootstrap support for B9SMX7 as seed ortholog is 96%.
Bootstrap support for A3LY87 as seed ortholog is 57%.
Alternative seed ortholog is A3LRJ3 (6 bits away from this cluster)

Group of orthologs #132. Best score 579 bits
Score difference with first non-orthologous sequence - R.communis:579 S.stipitis:579

B9RIE0              	100.00%		A3LPZ4              	100.00%
Bootstrap support for B9RIE0 as seed ortholog is 100%.
Bootstrap support for A3LPZ4 as seed ortholog is 100%.

Group of orthologs #133. Best score 578 bits
Score difference with first non-orthologous sequence - R.communis:220 S.stipitis:331

B9RV50              	100.00%		A3LST5              	100.00%
Bootstrap support for B9RV50 as seed ortholog is 100%.
Bootstrap support for A3LST5 as seed ortholog is 100%.

Group of orthologs #134. Best score 571 bits
Score difference with first non-orthologous sequence - R.communis:319 S.stipitis:571

B9RFB5              	100.00%		A3GEY5              	100.00%
Bootstrap support for B9RFB5 as seed ortholog is 100%.
Bootstrap support for A3GEY5 as seed ortholog is 100%.

Group of orthologs #135. Best score 569 bits
Score difference with first non-orthologous sequence - R.communis:201 S.stipitis:569

B9RN41              	100.00%		A3LY68              	100.00%
Bootstrap support for B9RN41 as seed ortholog is 99%.
Bootstrap support for A3LY68 as seed ortholog is 100%.

Group of orthologs #136. Best score 568 bits
Score difference with first non-orthologous sequence - R.communis:568 S.stipitis:568

B9RUF2              	100.00%		A3LYT5              	100.00%
Bootstrap support for B9RUF2 as seed ortholog is 100%.
Bootstrap support for A3LYT5 as seed ortholog is 100%.

Group of orthologs #137. Best score 568 bits
Score difference with first non-orthologous sequence - R.communis:397 S.stipitis:568

B9SUJ2              	100.00%		A3LUE4              	100.00%
Bootstrap support for B9SUJ2 as seed ortholog is 100%.
Bootstrap support for A3LUE4 as seed ortholog is 100%.

Group of orthologs #138. Best score 567 bits
Score difference with first non-orthologous sequence - R.communis:336 S.stipitis:567

B9SCE5              	100.00%		A3LNB5              	100.00%
Bootstrap support for B9SCE5 as seed ortholog is 100%.
Bootstrap support for A3LNB5 as seed ortholog is 100%.

Group of orthologs #139. Best score 567 bits
Score difference with first non-orthologous sequence - R.communis:357 S.stipitis:567

B9T3V9              	100.00%		A3LRL2              	100.00%
Bootstrap support for B9T3V9 as seed ortholog is 100%.
Bootstrap support for A3LRL2 as seed ortholog is 100%.

Group of orthologs #140. Best score 562 bits
Score difference with first non-orthologous sequence - R.communis:562 S.stipitis:562

B9T6F8              	100.00%		A3GFX3              	100.00%
B9SZ93              	55.88%		
Bootstrap support for B9T6F8 as seed ortholog is 100%.
Bootstrap support for A3GFX3 as seed ortholog is 100%.

Group of orthologs #141. Best score 561 bits
Score difference with first non-orthologous sequence - R.communis:561 S.stipitis:561

B9RG03              	100.00%		A3GFY3              	100.00%
Bootstrap support for B9RG03 as seed ortholog is 100%.
Bootstrap support for A3GFY3 as seed ortholog is 100%.

Group of orthologs #142. Best score 560 bits
Score difference with first non-orthologous sequence - R.communis:560 S.stipitis:560

B9RD55              	100.00%		A3LRK4              	100.00%
Bootstrap support for B9RD55 as seed ortholog is 100%.
Bootstrap support for A3LRK4 as seed ortholog is 100%.

Group of orthologs #143. Best score 560 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:560

G1D743              	100.00%		A3GGR8              	100.00%
Bootstrap support for G1D743 as seed ortholog is 86%.
Bootstrap support for A3GGR8 as seed ortholog is 100%.

Group of orthologs #144. Best score 559 bits
Score difference with first non-orthologous sequence - R.communis:485 S.stipitis:559

B9S0D0              	100.00%		A3LQB6              	100.00%
Bootstrap support for B9S0D0 as seed ortholog is 100%.
Bootstrap support for A3LQB6 as seed ortholog is 100%.

Group of orthologs #145. Best score 557 bits
Score difference with first non-orthologous sequence - R.communis:212 S.stipitis:359

B9SM44              	100.00%		A3LQ01              	100.00%
B9SYU7              	44.62%		
Bootstrap support for B9SM44 as seed ortholog is 100%.
Bootstrap support for A3LQ01 as seed ortholog is 100%.

Group of orthologs #146. Best score 552 bits
Score difference with first non-orthologous sequence - R.communis:552 S.stipitis:552

B9SCJ7              	100.00%		A3LP53              	100.00%
Bootstrap support for B9SCJ7 as seed ortholog is 100%.
Bootstrap support for A3LP53 as seed ortholog is 100%.

Group of orthologs #147. Best score 551 bits
Score difference with first non-orthologous sequence - R.communis:551 S.stipitis:551

B9T7K3              	100.00%		A3GI74              	100.00%
Bootstrap support for B9T7K3 as seed ortholog is 100%.
Bootstrap support for A3GI74 as seed ortholog is 100%.

Group of orthologs #148. Best score 545 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:545

B9T3E4              	100.00%		A3LNY6              	100.00%
B9RNS3              	34.75%		
Bootstrap support for B9T3E4 as seed ortholog is 99%.
Bootstrap support for A3LNY6 as seed ortholog is 100%.

Group of orthologs #149. Best score 544 bits
Score difference with first non-orthologous sequence - R.communis:544 S.stipitis:544

B9SL40              	100.00%		A3LTZ7              	100.00%
B9SZ39              	62.44%		
Bootstrap support for B9SL40 as seed ortholog is 100%.
Bootstrap support for A3LTZ7 as seed ortholog is 100%.

Group of orthologs #150. Best score 544 bits
Score difference with first non-orthologous sequence - R.communis:544 S.stipitis:297

B9S8E1              	100.00%		A3GEU5              	100.00%
Bootstrap support for B9S8E1 as seed ortholog is 100%.
Bootstrap support for A3GEU5 as seed ortholog is 100%.

Group of orthologs #151. Best score 543 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:543

B9RTY5              	100.00%		A3LZW6              	100.00%
                    	       		A3LTF0              	26.57%
Bootstrap support for B9RTY5 as seed ortholog is 99%.
Bootstrap support for A3LZW6 as seed ortholog is 100%.

Group of orthologs #152. Best score 542 bits
Score difference with first non-orthologous sequence - R.communis:276 S.stipitis:542

B9R7Z7              	100.00%		A3M0A5              	100.00%
B9R7Z8              	100.00%		
Bootstrap support for B9R7Z7 as seed ortholog is 100%.
Bootstrap support for B9R7Z8 as seed ortholog is 100%.
Bootstrap support for A3M0A5 as seed ortholog is 100%.

Group of orthologs #153. Best score 541 bits
Score difference with first non-orthologous sequence - R.communis:541 S.stipitis:541

B9SR98              	100.00%		A3LR11              	100.00%
B9SMI9              	75.00%		A3LT36              	30.43%
B9SFA3              	29.05%		
Bootstrap support for B9SR98 as seed ortholog is 100%.
Bootstrap support for A3LR11 as seed ortholog is 100%.

Group of orthologs #154. Best score 539 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:539

B9RRQ8              	100.00%		A3GFA4              	100.00%
Bootstrap support for B9RRQ8 as seed ortholog is 99%.
Bootstrap support for A3GFA4 as seed ortholog is 100%.

Group of orthologs #155. Best score 539 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:539

B9SW84              	100.00%		A3LQ55              	100.00%
Bootstrap support for B9SW84 as seed ortholog is 99%.
Bootstrap support for A3LQ55 as seed ortholog is 100%.

Group of orthologs #156. Best score 538 bits
Score difference with first non-orthologous sequence - R.communis:239 S.stipitis:470

B9R9J6              	100.00%		A3LQX4              	100.00%
B9SP64              	17.87%		
Bootstrap support for B9R9J6 as seed ortholog is 100%.
Bootstrap support for A3LQX4 as seed ortholog is 100%.

Group of orthologs #157. Best score 538 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:54

B9S4I6              	100.00%		A3GFV3              	100.00%
Bootstrap support for B9S4I6 as seed ortholog is 99%.
Bootstrap support for A3GFV3 as seed ortholog is 96%.

Group of orthologs #158. Best score 537 bits
Score difference with first non-orthologous sequence - R.communis:537 S.stipitis:537

B9RBE3              	100.00%		A3GG22              	100.00%
Bootstrap support for B9RBE3 as seed ortholog is 100%.
Bootstrap support for A3GG22 as seed ortholog is 100%.

Group of orthologs #159. Best score 537 bits
Score difference with first non-orthologous sequence - R.communis:285 S.stipitis:537

B9RZW7              	100.00%		A3LYY5              	100.00%
Bootstrap support for B9RZW7 as seed ortholog is 100%.
Bootstrap support for A3LYY5 as seed ortholog is 100%.

Group of orthologs #160. Best score 535 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:428

B9SFP0              	100.00%		A3LX50              	100.00%
Bootstrap support for B9SFP0 as seed ortholog is 99%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #161. Best score 534 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:339

B9T1F5              	100.00%		A3LRI0              	100.00%
B9T1F4              	61.23%		
Bootstrap support for B9T1F5 as seed ortholog is 99%.
Bootstrap support for A3LRI0 as seed ortholog is 100%.

Group of orthologs #162. Best score 534 bits
Score difference with first non-orthologous sequence - R.communis:430 S.stipitis:534

B9T178              	100.00%		A3M0K6              	100.00%
Bootstrap support for B9T178 as seed ortholog is 100%.
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #163. Best score 533 bits
Score difference with first non-orthologous sequence - R.communis:533 S.stipitis:138

B9RYS3              	100.00%		A3LZ49              	100.00%
B9SUI4              	61.05%		A3LZ50              	92.44%
B9RQ12              	53.29%		
B9SMX8              	39.53%		
B9RX59              	39.34%		
B9S9W9              	31.30%		
B9SA63              	23.26%		
Bootstrap support for B9RYS3 as seed ortholog is 100%.
Bootstrap support for A3LZ49 as seed ortholog is 99%.

Group of orthologs #164. Best score 532 bits
Score difference with first non-orthologous sequence - R.communis:245 S.stipitis:532

B9T066              	100.00%		A3LRX2              	100.00%
B9T7M3              	22.37%		
B9SV61              	19.77%		
Bootstrap support for B9T066 as seed ortholog is 99%.
Bootstrap support for A3LRX2 as seed ortholog is 100%.

Group of orthologs #165. Best score 529 bits
Score difference with first non-orthologous sequence - R.communis:40 S.stipitis:123

B9S7J9              	100.00%		A3LZ03              	100.00%
B9SZW4              	25.00%		
B9RCI4              	10.19%		
Bootstrap support for B9S7J9 as seed ortholog is 93%.
Bootstrap support for A3LZ03 as seed ortholog is 99%.

Group of orthologs #166. Best score 528 bits
Score difference with first non-orthologous sequence - R.communis:331 S.stipitis:325

B9SFQ7              	100.00%		A3LX20              	100.00%
Bootstrap support for B9SFQ7 as seed ortholog is 100%.
Bootstrap support for A3LX20 as seed ortholog is 100%.

Group of orthologs #167. Best score 526 bits
Score difference with first non-orthologous sequence - R.communis:526 S.stipitis:526

B9SKD1              	100.00%		A3LU50              	100.00%
B9SE83              	83.39%		
Bootstrap support for B9SKD1 as seed ortholog is 100%.
Bootstrap support for A3LU50 as seed ortholog is 100%.

Group of orthologs #168. Best score 526 bits
Score difference with first non-orthologous sequence - R.communis:526 S.stipitis:526

B9RWJ0              	100.00%		A3LPQ1              	100.00%
Bootstrap support for B9RWJ0 as seed ortholog is 100%.
Bootstrap support for A3LPQ1 as seed ortholog is 100%.

Group of orthologs #169. Best score 525 bits
Score difference with first non-orthologous sequence - R.communis:11 S.stipitis:87

B9RAW2              	100.00%		A3GHM9              	100.00%
B9T0M7              	7.25%		A3LR07              	44.95%
Bootstrap support for B9RAW2 as seed ortholog is 60%.
Alternative seed ortholog is B9SSV7 (11 bits away from this cluster)
Bootstrap support for A3GHM9 as seed ortholog is 98%.

Group of orthologs #170. Best score 525 bits
Score difference with first non-orthologous sequence - R.communis:525 S.stipitis:525

B9RU90              	100.00%		A3LUF6              	100.00%
Bootstrap support for B9RU90 as seed ortholog is 100%.
Bootstrap support for A3LUF6 as seed ortholog is 100%.

Group of orthologs #171. Best score 525 bits
Score difference with first non-orthologous sequence - R.communis:238 S.stipitis:525

B9STQ0              	100.00%		A3LTW6              	100.00%
Bootstrap support for B9STQ0 as seed ortholog is 100%.
Bootstrap support for A3LTW6 as seed ortholog is 100%.

Group of orthologs #172. Best score 524 bits
Score difference with first non-orthologous sequence - R.communis:524 S.stipitis:524

B9RR30              	100.00%		A3LTF8              	100.00%
B9T3Y2              	52.62%		
B9SJ39              	20.18%		
B9T500              	7.03%		
Bootstrap support for B9RR30 as seed ortholog is 100%.
Bootstrap support for A3LTF8 as seed ortholog is 100%.

Group of orthologs #173. Best score 524 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:524

B9RE72              	100.00%		A3LQD6              	100.00%
B9SRG1              	13.07%		
B9R9N6              	13.07%		
Bootstrap support for B9RE72 as seed ortholog is 99%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #174. Best score 524 bits
Score difference with first non-orthologous sequence - R.communis:247 S.stipitis:129

B9SB76              	100.00%		A3LZW0              	100.00%
Bootstrap support for B9SB76 as seed ortholog is 100%.
Bootstrap support for A3LZW0 as seed ortholog is 99%.

Group of orthologs #175. Best score 522 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:522

B9RNF5              	100.00%		A3GHU7              	100.00%
Bootstrap support for B9RNF5 as seed ortholog is 94%.
Bootstrap support for A3GHU7 as seed ortholog is 100%.

Group of orthologs #176. Best score 518 bits
Score difference with first non-orthologous sequence - R.communis:273 S.stipitis:303

B9RE38              	100.00%		A3LZN1              	100.00%
Bootstrap support for B9RE38 as seed ortholog is 99%.
Bootstrap support for A3LZN1 as seed ortholog is 99%.

Group of orthologs #177. Best score 517 bits
Score difference with first non-orthologous sequence - R.communis:517 S.stipitis:517

B9RHA6              	100.00%		A3GF60              	100.00%
B9R827              	70.96%		A3LUS8              	23.50%
B9T1Y7              	51.32%		
Bootstrap support for B9RHA6 as seed ortholog is 100%.
Bootstrap support for A3GF60 as seed ortholog is 100%.

Group of orthologs #178. Best score 517 bits
Score difference with first non-orthologous sequence - R.communis:517 S.stipitis:517

B9T3Z6              	100.00%		A3LX99              	100.00%
B9T3Z5              	55.11%		
Bootstrap support for B9T3Z6 as seed ortholog is 100%.
Bootstrap support for A3LX99 as seed ortholog is 100%.

Group of orthologs #179. Best score 517 bits
Score difference with first non-orthologous sequence - R.communis:517 S.stipitis:446

B9RAI8              	100.00%		A3GGX7              	100.00%
Bootstrap support for B9RAI8 as seed ortholog is 100%.
Bootstrap support for A3GGX7 as seed ortholog is 100%.

Group of orthologs #180. Best score 517 bits
Score difference with first non-orthologous sequence - R.communis:517 S.stipitis:517

B9S687              	100.00%		A3LVT5              	100.00%
Bootstrap support for B9S687 as seed ortholog is 100%.
Bootstrap support for A3LVT5 as seed ortholog is 100%.

Group of orthologs #181. Best score 514 bits
Score difference with first non-orthologous sequence - R.communis:514 S.stipitis:514

B9SAX6              	100.00%		A3LV88              	100.00%
Bootstrap support for B9SAX6 as seed ortholog is 100%.
Bootstrap support for A3LV88 as seed ortholog is 100%.

Group of orthologs #182. Best score 514 bits
Score difference with first non-orthologous sequence - R.communis:514 S.stipitis:514

B9SLX3              	100.00%		A3LWA5              	100.00%
Bootstrap support for B9SLX3 as seed ortholog is 100%.
Bootstrap support for A3LWA5 as seed ortholog is 100%.

Group of orthologs #183. Best score 513 bits
Score difference with first non-orthologous sequence - R.communis:513 S.stipitis:288

B9RQT2              	100.00%		A3LXA5              	100.00%
                    	       		A3LUJ6              	11.41%
Bootstrap support for B9RQT2 as seed ortholog is 100%.
Bootstrap support for A3LXA5 as seed ortholog is 100%.

Group of orthologs #184. Best score 513 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:513

B9T7E5              	100.00%		A3LR24              	100.00%
Bootstrap support for B9T7E5 as seed ortholog is 99%.
Bootstrap support for A3LR24 as seed ortholog is 100%.

Group of orthologs #185. Best score 511 bits
Score difference with first non-orthologous sequence - R.communis:511 S.stipitis:511

B9SU11              	100.00%		A3LZC1              	100.00%
Bootstrap support for B9SU11 as seed ortholog is 100%.
Bootstrap support for A3LZC1 as seed ortholog is 100%.

Group of orthologs #186. Best score 503 bits
Score difference with first non-orthologous sequence - R.communis:230 S.stipitis:186

B9SYU6              	100.00%		A3LP07              	100.00%
B9SM47              	27.15%		
B9R909              	17.22%		
Bootstrap support for B9SYU6 as seed ortholog is 100%.
Bootstrap support for A3LP07 as seed ortholog is 100%.

Group of orthologs #187. Best score 502 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:76

B9RC99              	100.00%		A3LVL5              	100.00%
B9RIA4              	37.48%		
B9RCA0              	29.11%		
B9SCE3              	20.04%		
Bootstrap support for B9RC99 as seed ortholog is 98%.
Bootstrap support for A3LVL5 as seed ortholog is 83%.

Group of orthologs #188. Best score 502 bits
Score difference with first non-orthologous sequence - R.communis:502 S.stipitis:322

B9SHE5              	100.00%		A3LPM2              	100.00%
B9T1E9              	71.06%		
Bootstrap support for B9SHE5 as seed ortholog is 100%.
Bootstrap support for A3LPM2 as seed ortholog is 100%.

Group of orthologs #189. Best score 501 bits
Score difference with first non-orthologous sequence - R.communis:501 S.stipitis:501

B9S7H9              	100.00%		A3GHI9              	100.00%
Bootstrap support for B9S7H9 as seed ortholog is 100%.
Bootstrap support for A3GHI9 as seed ortholog is 100%.

Group of orthologs #190. Best score 500 bits
Score difference with first non-orthologous sequence - R.communis:258 S.stipitis:134

B9S9N8              	100.00%		A3LVD6              	100.00%
Bootstrap support for B9S9N8 as seed ortholog is 99%.
Bootstrap support for A3LVD6 as seed ortholog is 99%.

Group of orthologs #191. Best score 498 bits
Score difference with first non-orthologous sequence - R.communis:316 S.stipitis:250

B9T1G7              	100.00%		A3LP36              	100.00%
B9RD09              	59.23%		
B9R933              	57.91%		
B9RNL5              	56.31%		
B9SZQ4              	54.12%		
B9SMV3              	53.03%		
B9RUL2              	51.20%		
B9SC05              	47.12%		
B9T501              	44.49%		
Bootstrap support for B9T1G7 as seed ortholog is 100%.
Bootstrap support for A3LP36 as seed ortholog is 100%.

Group of orthologs #192. Best score 497 bits
Score difference with first non-orthologous sequence - R.communis:497 S.stipitis:497

B9RLF2              	100.00%		A3LX46              	100.00%
B9SQY6              	33.25%		
B9T5S6              	31.23%		
Bootstrap support for B9RLF2 as seed ortholog is 100%.
Bootstrap support for A3LX46 as seed ortholog is 100%.

Group of orthologs #193. Best score 497 bits
Score difference with first non-orthologous sequence - R.communis:497 S.stipitis:333

B9RZA0              	100.00%		A3GI18              	100.00%
Bootstrap support for B9RZA0 as seed ortholog is 100%.
Bootstrap support for A3GI18 as seed ortholog is 100%.

Group of orthologs #194. Best score 496 bits
Score difference with first non-orthologous sequence - R.communis:324 S.stipitis:288

B9RX74              	100.00%		A3GF71              	100.00%
B9RX73              	53.91%		
Bootstrap support for B9RX74 as seed ortholog is 100%.
Bootstrap support for A3GF71 as seed ortholog is 100%.

Group of orthologs #195. Best score 495 bits
Score difference with first non-orthologous sequence - R.communis:495 S.stipitis:495

B9SBB6              	100.00%		A3LQ84              	100.00%
B9SP14              	29.80%		
Bootstrap support for B9SBB6 as seed ortholog is 100%.
Bootstrap support for A3LQ84 as seed ortholog is 100%.

Group of orthologs #196. Best score 493 bits
Score difference with first non-orthologous sequence - R.communis:493 S.stipitis:493

B9S9W8              	100.00%		A3M089              	100.00%
Bootstrap support for B9S9W8 as seed ortholog is 100%.
Bootstrap support for A3M089 as seed ortholog is 100%.

Group of orthologs #197. Best score 491 bits
Score difference with first non-orthologous sequence - R.communis:232 S.stipitis:182

B9SQC9              	100.00%		A3GFS0              	100.00%
B9SAC7              	26.52%		
Bootstrap support for B9SQC9 as seed ortholog is 99%.
Bootstrap support for A3GFS0 as seed ortholog is 99%.

Group of orthologs #198. Best score 490 bits
Score difference with first non-orthologous sequence - R.communis:490 S.stipitis:490

B9REV8              	100.00%		A3LUT0              	100.00%
B9T4Q4              	62.76%		
Bootstrap support for B9REV8 as seed ortholog is 100%.
Bootstrap support for A3LUT0 as seed ortholog is 100%.

Group of orthologs #199. Best score 490 bits
Score difference with first non-orthologous sequence - R.communis:356 S.stipitis:391

B9RVL8              	100.00%		A3LYL8              	100.00%
Bootstrap support for B9RVL8 as seed ortholog is 100%.
Bootstrap support for A3LYL8 as seed ortholog is 100%.

Group of orthologs #200. Best score 489 bits
Score difference with first non-orthologous sequence - R.communis:489 S.stipitis:489

B9RN65              	100.00%		A3LNJ6              	100.00%
B9RFQ1              	92.86%		
B9RZZ0              	88.51%		
B9S0G1              	76.09%		
B9SCI6              	72.36%		
Bootstrap support for B9RN65 as seed ortholog is 100%.
Bootstrap support for A3LNJ6 as seed ortholog is 100%.

Group of orthologs #201. Best score 489 bits
Score difference with first non-orthologous sequence - R.communis:250 S.stipitis:138

B9RYJ2              	100.00%		A3GI51              	100.00%
Bootstrap support for B9RYJ2 as seed ortholog is 100%.
Bootstrap support for A3GI51 as seed ortholog is 99%.

Group of orthologs #202. Best score 489 bits
Score difference with first non-orthologous sequence - R.communis:489 S.stipitis:489

B9S9Y8              	100.00%		A3GHA0              	100.00%
Bootstrap support for B9S9Y8 as seed ortholog is 100%.
Bootstrap support for A3GHA0 as seed ortholog is 100%.

Group of orthologs #203. Best score 487 bits
Score difference with first non-orthologous sequence - R.communis:487 S.stipitis:487

B9RTA5              	100.00%		A3GHN8              	100.00%
B9RFF1              	55.92%		
Bootstrap support for B9RTA5 as seed ortholog is 100%.
Bootstrap support for A3GHN8 as seed ortholog is 100%.

Group of orthologs #204. Best score 487 bits
Score difference with first non-orthologous sequence - R.communis:411 S.stipitis:487

B9SSN3              	100.00%		A3LXF0              	100.00%
Bootstrap support for B9SSN3 as seed ortholog is 100%.
Bootstrap support for A3LXF0 as seed ortholog is 100%.

Group of orthologs #205. Best score 485 bits
Score difference with first non-orthologous sequence - R.communis:485 S.stipitis:485

B9SXV1              	100.00%		A3LXR1              	100.00%
B9SGR6              	18.40%		
Bootstrap support for B9SXV1 as seed ortholog is 100%.
Bootstrap support for A3LXR1 as seed ortholog is 100%.

Group of orthologs #206. Best score 484 bits
Score difference with first non-orthologous sequence - R.communis:228 S.stipitis:256

B9S6I7              	100.00%		A3LZZ3              	100.00%
Bootstrap support for B9S6I7 as seed ortholog is 99%.
Bootstrap support for A3LZZ3 as seed ortholog is 100%.

Group of orthologs #207. Best score 483 bits
Score difference with first non-orthologous sequence - R.communis:483 S.stipitis:483

B9S9Y6              	100.00%		A3LNU0              	100.00%
Bootstrap support for B9S9Y6 as seed ortholog is 100%.
Bootstrap support for A3LNU0 as seed ortholog is 100%.

Group of orthologs #208. Best score 483 bits
Score difference with first non-orthologous sequence - R.communis:483 S.stipitis:106

B9STA4              	100.00%		A3LUC7              	100.00%
Bootstrap support for B9STA4 as seed ortholog is 100%.
Bootstrap support for A3LUC7 as seed ortholog is 97%.

Group of orthologs #209. Best score 482 bits
Score difference with first non-orthologous sequence - R.communis:224 S.stipitis:482

B9SKS5              	100.00%		A3LP67              	100.00%
Bootstrap support for B9SKS5 as seed ortholog is 100%.
Bootstrap support for A3LP67 as seed ortholog is 100%.

Group of orthologs #210. Best score 481 bits
Score difference with first non-orthologous sequence - R.communis:481 S.stipitis:481

B9RAK0              	100.00%		A3GHS7              	100.00%
                    	       		A3LZ10              	20.12%
Bootstrap support for B9RAK0 as seed ortholog is 100%.
Bootstrap support for A3GHS7 as seed ortholog is 100%.

Group of orthologs #211. Best score 481 bits
Score difference with first non-orthologous sequence - R.communis:481 S.stipitis:481

B9SDQ1              	100.00%		A3LW56              	100.00%
B9RL15              	85.56%		
Bootstrap support for B9SDQ1 as seed ortholog is 100%.
Bootstrap support for A3LW56 as seed ortholog is 100%.

Group of orthologs #212. Best score 481 bits
Score difference with first non-orthologous sequence - R.communis:249 S.stipitis:331

B9SAD3              	100.00%		A3GGE9              	100.00%
Bootstrap support for B9SAD3 as seed ortholog is 100%.
Bootstrap support for A3GGE9 as seed ortholog is 100%.

Group of orthologs #213. Best score 480 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:480

B9RAL0              	100.00%		A3LQ70              	100.00%
B9RBN8              	30.21%		A3LZZ7              	43.65%
B9RHV9              	8.33%		A3LNP7              	37.02%
Bootstrap support for B9RAL0 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #214. Best score 479 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:479

B9RFG6              	100.00%		A3LWL5              	100.00%
B9RNI5              	56.68%		
B9RZK9              	53.42%		
B9RZU5              	41.78%		
Bootstrap support for B9RFG6 as seed ortholog is 100%.
Bootstrap support for A3LWL5 as seed ortholog is 100%.

Group of orthologs #215. Best score 479 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:479

B9RYE9              	100.00%		A3LXL0              	100.00%
B9R792              	71.73%		
B9SM76              	29.27%		
Bootstrap support for B9RYE9 as seed ortholog is 99%.
Bootstrap support for A3LXL0 as seed ortholog is 100%.

Group of orthologs #216. Best score 478 bits
Score difference with first non-orthologous sequence - R.communis:115 S.stipitis:36

B9RKT3              	100.00%		A3LNE3              	100.00%
B9RKT6              	67.61%		
B9RB49              	16.10%		
Bootstrap support for B9RKT3 as seed ortholog is 99%.
Bootstrap support for A3LNE3 as seed ortholog is 81%.

Group of orthologs #217. Best score 478 bits
Score difference with first non-orthologous sequence - R.communis:258 S.stipitis:275

B9RMS2              	100.00%		A3LYF0              	100.00%
Bootstrap support for B9RMS2 as seed ortholog is 100%.
Bootstrap support for A3LYF0 as seed ortholog is 100%.

Group of orthologs #218. Best score 477 bits
Score difference with first non-orthologous sequence - R.communis:477 S.stipitis:418

B9SJT7              	100.00%		A3LR72              	100.00%
B9RQ34              	92.48%		
B9SKY7              	49.31%		
Bootstrap support for B9SJT7 as seed ortholog is 100%.
Bootstrap support for A3LR72 as seed ortholog is 100%.

Group of orthologs #219. Best score 477 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:91

B9T206              	100.00%		A3LPM3              	100.00%
Bootstrap support for B9T206 as seed ortholog is 97%.
Bootstrap support for A3LPM3 as seed ortholog is 99%.

Group of orthologs #220. Best score 475 bits
Score difference with first non-orthologous sequence - R.communis:379 S.stipitis:201

B9RZZ4              	100.00%		A3LRI6              	100.00%
B9RFG3              	83.51%		A3LZU3              	25.02%
B9RQF0              	43.62%		A3LUN9              	23.30%
B9RJZ6              	42.14%		A3LMR6              	22.69%
B9RQF1              	41.88%		A3LTM4              	22.56%
B9RQE9              	41.75%		
B9SMW3              	41.67%		
B9SMW1              	41.36%		
B9RJZ7              	41.32%		
B9RGL9              	40.89%		
B9SMW0              	40.54%		
B9SSW0              	40.41%		
B9RQF2              	40.28%		
B9SRE5              	40.06%		
B9STK8              	39.93%		
B9T794              	39.71%		
B9SSW1              	39.67%		
B9RJZ4              	39.11%		
B9RJZ3              	38.11%		
B9SMW2              	37.20%		
B9SI18              	35.89%		
B9RJZ5              	34.90%		
B9T195              	33.03%		
B9RP91              	32.64%		
Bootstrap support for B9RZZ4 as seed ortholog is 100%.
Bootstrap support for A3LRI6 as seed ortholog is 99%.

Group of orthologs #221. Best score 474 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:138

B9SV24              	100.00%		A3LT94              	100.00%
B9SS69              	49.25%		
B9S7L3              	47.15%		
B9S5V9              	19.52%		
Bootstrap support for B9SV24 as seed ortholog is 99%.
Bootstrap support for A3LT94 as seed ortholog is 100%.

Group of orthologs #222. Best score 474 bits
Score difference with first non-orthologous sequence - R.communis:474 S.stipitis:474

B9S5J0              	100.00%		A3GGQ5              	100.00%
Bootstrap support for B9S5J0 as seed ortholog is 100%.
Bootstrap support for A3GGQ5 as seed ortholog is 100%.

Group of orthologs #223. Best score 473 bits
Score difference with first non-orthologous sequence - R.communis:473 S.stipitis:473

B9RXG5              	100.00%		A3LRH3              	100.00%
Bootstrap support for B9RXG5 as seed ortholog is 100%.
Bootstrap support for A3LRH3 as seed ortholog is 100%.

Group of orthologs #224. Best score 473 bits
Score difference with first non-orthologous sequence - R.communis:208 S.stipitis:231

B9T2R0              	100.00%		A3LU23              	100.00%
Bootstrap support for B9T2R0 as seed ortholog is 100%.
Bootstrap support for A3LU23 as seed ortholog is 100%.

Group of orthologs #225. Best score 470 bits
Score difference with first non-orthologous sequence - R.communis:344 S.stipitis:38

B9SGY9              	100.00%		A3GID5              	100.00%
Bootstrap support for B9SGY9 as seed ortholog is 100%.
Bootstrap support for A3GID5 as seed ortholog is 89%.

Group of orthologs #226. Best score 469 bits
Score difference with first non-orthologous sequence - R.communis:306 S.stipitis:339

B9S0X8              	100.00%		A3LSS9              	100.00%
Bootstrap support for B9S0X8 as seed ortholog is 100%.
Bootstrap support for A3LSS9 as seed ortholog is 100%.

Group of orthologs #227. Best score 469 bits
Score difference with first non-orthologous sequence - R.communis:160 S.stipitis:316

B9T5W1              	100.00%		A3GI80              	100.00%
Bootstrap support for B9T5W1 as seed ortholog is 100%.
Bootstrap support for A3GI80 as seed ortholog is 100%.

Group of orthologs #228. Best score 468 bits
Score difference with first non-orthologous sequence - R.communis:468 S.stipitis:468

B9RIY3              	100.00%		A3LWP1              	100.00%
B9S9I6              	73.78%		
B9T616              	72.16%		
Bootstrap support for B9RIY3 as seed ortholog is 100%.
Bootstrap support for A3LWP1 as seed ortholog is 100%.

Group of orthologs #229. Best score 463 bits
Score difference with first non-orthologous sequence - R.communis:463 S.stipitis:463

B9RCP3              	100.00%		A3GHC7              	100.00%
Bootstrap support for B9RCP3 as seed ortholog is 100%.
Bootstrap support for A3GHC7 as seed ortholog is 100%.

Group of orthologs #230. Best score 463 bits
Score difference with first non-orthologous sequence - R.communis:463 S.stipitis:463

B9R7T9              	100.00%		A3LT99              	100.00%
Bootstrap support for B9R7T9 as seed ortholog is 100%.
Bootstrap support for A3LT99 as seed ortholog is 100%.

Group of orthologs #231. Best score 463 bits
Score difference with first non-orthologous sequence - R.communis:463 S.stipitis:463

B9RGA7              	100.00%		A3LPQ6              	100.00%
Bootstrap support for B9RGA7 as seed ortholog is 100%.
Bootstrap support for A3LPQ6 as seed ortholog is 100%.

Group of orthologs #232. Best score 462 bits
Score difference with first non-orthologous sequence - R.communis:240 S.stipitis:462

B9T0X5              	100.00%		A3LZT3              	100.00%
Bootstrap support for B9T0X5 as seed ortholog is 99%.
Bootstrap support for A3LZT3 as seed ortholog is 100%.

Group of orthologs #233. Best score 461 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:167

B9SN38              	100.00%		A3GGG1              	100.00%
B9STR3              	67.49%		
B9RNV4              	65.84%		
B9SC23              	12.17%		
B9SEZ5              	8.16%		
Bootstrap support for B9SN38 as seed ortholog is 99%.
Bootstrap support for A3GGG1 as seed ortholog is 99%.

Group of orthologs #234. Best score 461 bits
Score difference with first non-orthologous sequence - R.communis:300 S.stipitis:401

B9RAF1              	100.00%		A3LUG6              	100.00%
Bootstrap support for B9RAF1 as seed ortholog is 100%.
Bootstrap support for A3LUG6 as seed ortholog is 100%.

Group of orthologs #235. Best score 460 bits
Score difference with first non-orthologous sequence - R.communis:383 S.stipitis:317

B9SBT1              	100.00%		A3LQU4              	100.00%
Bootstrap support for B9SBT1 as seed ortholog is 100%.
Bootstrap support for A3LQU4 as seed ortholog is 100%.

Group of orthologs #236. Best score 459 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:155

B9SUZ1              	100.00%		A3LRD1              	100.00%
                    	       		A3LPT8              	7.64%
Bootstrap support for B9SUZ1 as seed ortholog is 99%.
Bootstrap support for A3LRD1 as seed ortholog is 99%.

Group of orthologs #237. Best score 459 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:78

B9SZ18              	100.00%		A3LPC1              	100.00%
B9S8H7              	64.90%		
Bootstrap support for B9SZ18 as seed ortholog is 99%.
Bootstrap support for A3LPC1 as seed ortholog is 93%.

Group of orthologs #238. Best score 457 bits
Score difference with first non-orthologous sequence - R.communis:376 S.stipitis:457

B9SRE8              	100.00%		A3LRJ9              	100.00%
B9RRR6              	71.24%		
Bootstrap support for B9SRE8 as seed ortholog is 100%.
Bootstrap support for A3LRJ9 as seed ortholog is 100%.

Group of orthologs #239. Best score 457 bits
Score difference with first non-orthologous sequence - R.communis:457 S.stipitis:457

B9S5G9              	100.00%		A3LVH6              	100.00%
Bootstrap support for B9S5G9 as seed ortholog is 100%.
Bootstrap support for A3LVH6 as seed ortholog is 100%.

Group of orthologs #240. Best score 456 bits
Score difference with first non-orthologous sequence - R.communis:456 S.stipitis:456

B9RMK5              	100.00%		A3LW01              	100.00%
B9RMK6              	53.82%		
B9SH46              	40.20%		
B9S0E4              	26.25%		
B9RS96              	16.61%		
B9RP94              	10.63%		
Bootstrap support for B9RMK5 as seed ortholog is 100%.
Bootstrap support for A3LW01 as seed ortholog is 100%.

Group of orthologs #241. Best score 456 bits
Score difference with first non-orthologous sequence - R.communis:312 S.stipitis:456

B9SP93              	100.00%		A3LTI6              	100.00%
B9RHS9              	37.38%		
B9SWS3              	34.65%		
B9SMW8              	32.98%		
B9RHT0              	31.93%		
B9SMW6              	21.46%		
Bootstrap support for B9SP93 as seed ortholog is 100%.
Bootstrap support for A3LTI6 as seed ortholog is 100%.

Group of orthologs #242. Best score 455 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:371

B9RVW7              	100.00%		A3LZD4              	100.00%
B9T0Z2              	43.85%		A3LUG5              	53.10%
B9RIA7              	41.53%		
B9RIA6              	33.55%		
Bootstrap support for B9RVW7 as seed ortholog is 99%.
Bootstrap support for A3LZD4 as seed ortholog is 100%.

Group of orthologs #243. Best score 455 bits
Score difference with first non-orthologous sequence - R.communis:455 S.stipitis:455

B9SSQ1              	100.00%		A3LUX2              	100.00%
Bootstrap support for B9SSQ1 as seed ortholog is 100%.
Bootstrap support for A3LUX2 as seed ortholog is 100%.

Group of orthologs #244. Best score 454 bits
Score difference with first non-orthologous sequence - R.communis:153 S.stipitis:177

B9RH40              	100.00%		A3LYA7              	100.00%
Bootstrap support for B9RH40 as seed ortholog is 99%.
Bootstrap support for A3LYA7 as seed ortholog is 99%.

Group of orthologs #245. Best score 453 bits
Score difference with first non-orthologous sequence - R.communis:453 S.stipitis:453

B9RVA7              	100.00%		A3GI40              	100.00%
B9RCL8              	97.93%		
B9SXT4              	53.11%		
Bootstrap support for B9RVA7 as seed ortholog is 100%.
Bootstrap support for A3GI40 as seed ortholog is 100%.

Group of orthologs #246. Best score 452 bits
Score difference with first non-orthologous sequence - R.communis:452 S.stipitis:452

B9T842              	100.00%		A3LUK4              	100.00%
Bootstrap support for B9T842 as seed ortholog is 100%.
Bootstrap support for A3LUK4 as seed ortholog is 100%.

Group of orthologs #247. Best score 449 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:134

B9SYY8              	100.00%		A3M0C2              	100.00%
Bootstrap support for B9SYY8 as seed ortholog is 100%.
Bootstrap support for A3M0C2 as seed ortholog is 99%.

Group of orthologs #248. Best score 448 bits
Score difference with first non-orthologous sequence - R.communis:448 S.stipitis:448

B9RQ50              	100.00%		A3LXP8              	100.00%
B9T216              	58.90%		
B9SMN8              	52.75%		
Bootstrap support for B9RQ50 as seed ortholog is 100%.
Bootstrap support for A3LXP8 as seed ortholog is 100%.

Group of orthologs #249. Best score 448 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:448

B9S1Q1              	100.00%		A3LUE7              	100.00%
B9RKX9              	83.48%		
Bootstrap support for B9S1Q1 as seed ortholog is 100%.
Bootstrap support for A3LUE7 as seed ortholog is 100%.

Group of orthologs #250. Best score 448 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:448

B9SL58              	100.00%		A3LYS9              	100.00%
Bootstrap support for B9SL58 as seed ortholog is 99%.
Bootstrap support for A3LYS9 as seed ortholog is 100%.

Group of orthologs #251. Best score 447 bits
Score difference with first non-orthologous sequence - R.communis:447 S.stipitis:447

B9RW28              	100.00%		A3GI67              	100.00%
Bootstrap support for B9RW28 as seed ortholog is 100%.
Bootstrap support for A3GI67 as seed ortholog is 100%.

Group of orthologs #252. Best score 445 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:445

B9SCR4              	100.00%		A3LVF1              	100.00%
B9SG62              	43.54%		
Bootstrap support for B9SCR4 as seed ortholog is 100%.
Bootstrap support for A3LVF1 as seed ortholog is 100%.

Group of orthologs #253. Best score 444 bits
Score difference with first non-orthologous sequence - R.communis:95 S.stipitis:165

B9RBZ5              	100.00%		A3LMW8              	100.00%
B9T001              	16.02%		
Bootstrap support for B9RBZ5 as seed ortholog is 99%.
Bootstrap support for A3LMW8 as seed ortholog is 100%.

Group of orthologs #254. Best score 442 bits
Score difference with first non-orthologous sequence - R.communis:442 S.stipitis:442

B9SW52              	100.00%		A3LYR5              	100.00%
B9RMA8              	55.29%		
B9T826              	50.53%		
B9RFN8              	16.27%		
Bootstrap support for B9SW52 as seed ortholog is 100%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #255. Best score 442 bits
Score difference with first non-orthologous sequence - R.communis:442 S.stipitis:442

B9SVA2              	100.00%		A3LSB3              	100.00%
Bootstrap support for B9SVA2 as seed ortholog is 100%.
Bootstrap support for A3LSB3 as seed ortholog is 100%.

Group of orthologs #256. Best score 440 bits
Score difference with first non-orthologous sequence - R.communis:440 S.stipitis:440

B9SUQ8              	100.00%		A3LR89              	100.00%
B9RVZ6              	100.00%		A3GFC1              	100.00%
B9SQ55              	58.55%		A3GH41              	39.43%
B9REL3              	52.83%		
B9RVZ7              	51.06%		
B9SKY2              	47.14%		
B9SVW5              	44.93%		
B9SQ54              	34.12%		
B9RAN8              	33.61%		
B9RZ95              	28.56%		
Bootstrap support for B9SUQ8 as seed ortholog is 100%.
Bootstrap support for B9RVZ6 as seed ortholog is 100%.
Bootstrap support for A3LR89 as seed ortholog is 100%.
Bootstrap support for A3GFC1 as seed ortholog is 100%.

Group of orthologs #257. Best score 440 bits
Score difference with first non-orthologous sequence - R.communis:440 S.stipitis:440

B9RH05              	100.00%		A3LWQ1              	100.00%
Bootstrap support for B9RH05 as seed ortholog is 100%.
Bootstrap support for A3LWQ1 as seed ortholog is 100%.

Group of orthologs #258. Best score 440 bits
Score difference with first non-orthologous sequence - R.communis:357 S.stipitis:440

B9SHG6              	100.00%		A3GFA7              	100.00%
Bootstrap support for B9SHG6 as seed ortholog is 100%.
Bootstrap support for A3GFA7 as seed ortholog is 100%.

Group of orthologs #259. Best score 439 bits
Score difference with first non-orthologous sequence - R.communis:439 S.stipitis:439

B9RE19              	100.00%		A3LQ74              	100.00%
B9ST19              	100.00%		
Bootstrap support for B9RE19 as seed ortholog is 100%.
Bootstrap support for B9ST19 as seed ortholog is 100%.
Bootstrap support for A3LQ74 as seed ortholog is 100%.

Group of orthologs #260. Best score 437 bits
Score difference with first non-orthologous sequence - R.communis:181 S.stipitis:112

B9R6Y5              	100.00%		A3M0L3              	100.00%
Bootstrap support for B9R6Y5 as seed ortholog is 99%.
Bootstrap support for A3M0L3 as seed ortholog is 94%.

Group of orthologs #261. Best score 437 bits
Score difference with first non-orthologous sequence - R.communis:241 S.stipitis:437

B9S4M0              	100.00%		A3LQX8              	100.00%
Bootstrap support for B9S4M0 as seed ortholog is 100%.
Bootstrap support for A3LQX8 as seed ortholog is 100%.

Group of orthologs #262. Best score 436 bits
Score difference with first non-orthologous sequence - R.communis:203 S.stipitis:208

B9R8B1              	100.00%		A3LSN3              	100.00%
Bootstrap support for B9R8B1 as seed ortholog is 99%.
Bootstrap support for A3LSN3 as seed ortholog is 100%.

Group of orthologs #263. Best score 436 bits
Score difference with first non-orthologous sequence - R.communis:363 S.stipitis:379

B9RVU4              	100.00%		A3LNJ0              	100.00%
Bootstrap support for B9RVU4 as seed ortholog is 100%.
Bootstrap support for A3LNJ0 as seed ortholog is 100%.

Group of orthologs #264. Best score 435 bits
Score difference with first non-orthologous sequence - R.communis:220 S.stipitis:312

B9RAX0              	100.00%		A3LQP0              	100.00%
B9SPJ2              	35.84%		
Bootstrap support for B9RAX0 as seed ortholog is 100%.
Bootstrap support for A3LQP0 as seed ortholog is 100%.

Group of orthologs #265. Best score 434 bits
Score difference with first non-orthologous sequence - R.communis:434 S.stipitis:60

B9RF64              	100.00%		A3LMX4              	100.00%
B9SGI3              	9.67%		
Bootstrap support for B9RF64 as seed ortholog is 100%.
Bootstrap support for A3LMX4 as seed ortholog is 82%.

Group of orthologs #266. Best score 434 bits
Score difference with first non-orthologous sequence - R.communis:434 S.stipitis:434

B9RZB3              	100.00%		A3LYX2              	100.00%
Bootstrap support for B9RZB3 as seed ortholog is 100%.
Bootstrap support for A3LYX2 as seed ortholog is 100%.

Group of orthologs #267. Best score 433 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:433

B9RFW4              	100.00%		A3LYM2              	100.00%
Bootstrap support for B9RFW4 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #268. Best score 433 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:194

B9RUV8              	100.00%		A3GFD8              	100.00%
Bootstrap support for B9RUV8 as seed ortholog is 89%.
Bootstrap support for A3GFD8 as seed ortholog is 99%.

Group of orthologs #269. Best score 433 bits
Score difference with first non-orthologous sequence - R.communis:433 S.stipitis:92

B9S1K8              	100.00%		A3GG30              	100.00%
Bootstrap support for B9S1K8 as seed ortholog is 100%.
Bootstrap support for A3GG30 as seed ortholog is 94%.

Group of orthologs #270. Best score 432 bits
Score difference with first non-orthologous sequence - R.communis:432 S.stipitis:432

B9RBF3              	100.00%		A3LRA4              	100.00%
Bootstrap support for B9RBF3 as seed ortholog is 100%.
Bootstrap support for A3LRA4 as seed ortholog is 100%.

Group of orthologs #271. Best score 431 bits
Score difference with first non-orthologous sequence - R.communis:322 S.stipitis:133

B9T474              	100.00%		A3LRW3              	100.00%
B9RJ34              	7.33%		
B9RET0              	7.03%		
Bootstrap support for B9T474 as seed ortholog is 100%.
Bootstrap support for A3LRW3 as seed ortholog is 98%.

Group of orthologs #272. Best score 431 bits
Score difference with first non-orthologous sequence - R.communis:431 S.stipitis:431

B9RRU6              	100.00%		A3LRP2              	100.00%
B9RAZ6              	26.59%		
Bootstrap support for B9RRU6 as seed ortholog is 100%.
Bootstrap support for A3LRP2 as seed ortholog is 100%.

Group of orthologs #273. Best score 431 bits
Score difference with first non-orthologous sequence - R.communis:431 S.stipitis:431

B9RKG4              	100.00%		A3LUZ6              	100.00%
Bootstrap support for B9RKG4 as seed ortholog is 100%.
Bootstrap support for A3LUZ6 as seed ortholog is 100%.

Group of orthologs #274. Best score 431 bits
Score difference with first non-orthologous sequence - R.communis:431 S.stipitis:431

B9T542              	100.00%		A3LS68              	100.00%
Bootstrap support for B9T542 as seed ortholog is 100%.
Bootstrap support for A3LS68 as seed ortholog is 100%.

Group of orthologs #275. Best score 430 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:222

B9RI04              	100.00%		A3LS22              	100.00%
Bootstrap support for B9RI04 as seed ortholog is 100%.
Bootstrap support for A3LS22 as seed ortholog is 100%.

Group of orthologs #276. Best score 430 bits
Score difference with first non-orthologous sequence - R.communis:231 S.stipitis:315

B9SE08              	100.00%		A3GET1              	100.00%
Bootstrap support for B9SE08 as seed ortholog is 100%.
Bootstrap support for A3GET1 as seed ortholog is 100%.

Group of orthologs #277. Best score 430 bits
Score difference with first non-orthologous sequence - R.communis:367 S.stipitis:430

B9STX3              	100.00%		A3M0A1              	100.00%
Bootstrap support for B9STX3 as seed ortholog is 100%.
Bootstrap support for A3M0A1 as seed ortholog is 100%.

Group of orthologs #278. Best score 423 bits
Score difference with first non-orthologous sequence - R.communis:423 S.stipitis:423

B9RFF6              	100.00%		A3GI11              	100.00%
Bootstrap support for B9RFF6 as seed ortholog is 100%.
Bootstrap support for A3GI11 as seed ortholog is 100%.

Group of orthologs #279. Best score 423 bits
Score difference with first non-orthologous sequence - R.communis:423 S.stipitis:423

B9RWC2              	100.00%		A3LZY4              	100.00%
Bootstrap support for B9RWC2 as seed ortholog is 100%.
Bootstrap support for A3LZY4 as seed ortholog is 100%.

Group of orthologs #280. Best score 421 bits
Score difference with first non-orthologous sequence - R.communis:421 S.stipitis:421

B9RSS1              	100.00%		A3LNC1              	100.00%
B9RBH6              	39.34%		
Bootstrap support for B9RSS1 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #281. Best score 421 bits
Score difference with first non-orthologous sequence - R.communis:147 S.stipitis:350

B9SRK6              	100.00%		A3LW23              	100.00%
Bootstrap support for B9SRK6 as seed ortholog is 100%.
Bootstrap support for A3LW23 as seed ortholog is 100%.

Group of orthologs #282. Best score 420 bits
Score difference with first non-orthologous sequence - R.communis:420 S.stipitis:175

B9RAJ0              	100.00%		A3LQF5              	100.00%
B9SG76              	24.16%		
Bootstrap support for B9RAJ0 as seed ortholog is 100%.
Bootstrap support for A3LQF5 as seed ortholog is 99%.

Group of orthologs #283. Best score 420 bits
Score difference with first non-orthologous sequence - R.communis:420 S.stipitis:420

B9SAN7              	100.00%		A3LTV2              	100.00%
Bootstrap support for B9SAN7 as seed ortholog is 100%.
Bootstrap support for A3LTV2 as seed ortholog is 100%.

Group of orthologs #284. Best score 420 bits
Score difference with first non-orthologous sequence - R.communis:420 S.stipitis:420

B9SBF8              	100.00%		A3LWX0              	100.00%
Bootstrap support for B9SBF8 as seed ortholog is 100%.
Bootstrap support for A3LWX0 as seed ortholog is 100%.

Group of orthologs #285. Best score 419 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:134

B9RGI8              	100.00%		A3LXC5              	100.00%
Bootstrap support for B9RGI8 as seed ortholog is 100%.
Bootstrap support for A3LXC5 as seed ortholog is 99%.

Group of orthologs #286. Best score 419 bits
Score difference with first non-orthologous sequence - R.communis:419 S.stipitis:419

B9SH94              	100.00%		A3LQL4              	100.00%
Bootstrap support for B9SH94 as seed ortholog is 100%.
Bootstrap support for A3LQL4 as seed ortholog is 100%.

Group of orthologs #287. Best score 418 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:418

B9R7S8              	100.00%		A3LXX9              	100.00%
Bootstrap support for B9R7S8 as seed ortholog is 100%.
Bootstrap support for A3LXX9 as seed ortholog is 100%.

Group of orthologs #288. Best score 418 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:418

B9SXG0              	100.00%		A3LYJ6              	100.00%
Bootstrap support for B9SXG0 as seed ortholog is 80%.
Bootstrap support for A3LYJ6 as seed ortholog is 100%.

Group of orthologs #289. Best score 416 bits
Score difference with first non-orthologous sequence - R.communis:416 S.stipitis:416

B9SU65              	100.00%		A3LUC6              	100.00%
Bootstrap support for B9SU65 as seed ortholog is 100%.
Bootstrap support for A3LUC6 as seed ortholog is 100%.

Group of orthologs #290. Best score 415 bits
Score difference with first non-orthologous sequence - R.communis:415 S.stipitis:146

B9SDJ7              	100.00%		A3LQ67              	100.00%
B9RL32              	30.94%		
B9S355              	28.13%		
B9SJY8              	27.56%		
B9SSN0              	11.58%		
B9S326              	9.17%		
Bootstrap support for B9SDJ7 as seed ortholog is 100%.
Bootstrap support for A3LQ67 as seed ortholog is 97%.

Group of orthologs #291. Best score 415 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:208

B9SA57              	100.00%		A3LUB4              	100.00%
                    	       		A3LPT7              	20.22%
Bootstrap support for B9SA57 as seed ortholog is 100%.
Bootstrap support for A3LUB4 as seed ortholog is 100%.

Group of orthologs #292. Best score 415 bits
Score difference with first non-orthologous sequence - R.communis:249 S.stipitis:365

B9RNW6              	100.00%		A3M063              	100.00%
Bootstrap support for B9RNW6 as seed ortholog is 100%.
Bootstrap support for A3M063 as seed ortholog is 100%.

Group of orthologs #293. Best score 414 bits
Score difference with first non-orthologous sequence - R.communis:414 S.stipitis:414

B9RH61              	100.00%		A3LXQ0              	100.00%
Bootstrap support for B9RH61 as seed ortholog is 100%.
Bootstrap support for A3LXQ0 as seed ortholog is 100%.

Group of orthologs #294. Best score 414 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:209

B9RZ31              	100.00%		A3LRW2              	100.00%
Bootstrap support for B9RZ31 as seed ortholog is 99%.
Bootstrap support for A3LRW2 as seed ortholog is 100%.

Group of orthologs #295. Best score 413 bits
Score difference with first non-orthologous sequence - R.communis:413 S.stipitis:413

B9RNS0              	100.00%		A3LY29              	100.00%
Bootstrap support for B9RNS0 as seed ortholog is 100%.
Bootstrap support for A3LY29 as seed ortholog is 100%.

Group of orthologs #296. Best score 412 bits
Score difference with first non-orthologous sequence - R.communis:412 S.stipitis:412

B9R7G0              	100.00%		A3LWP3              	100.00%
Bootstrap support for B9R7G0 as seed ortholog is 100%.
Bootstrap support for A3LWP3 as seed ortholog is 100%.

Group of orthologs #297. Best score 411 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:411

B9SUA2              	100.00%		A3LYZ8              	100.00%
Bootstrap support for B9SUA2 as seed ortholog is 100%.
Bootstrap support for A3LYZ8 as seed ortholog is 100%.

Group of orthologs #298. Best score 410 bits
Score difference with first non-orthologous sequence - R.communis:237 S.stipitis:191

B9RK53              	100.00%		A3LQA3              	100.00%
B9RQT0              	66.50%		
B9SV26              	37.86%		
B9R7B8              	32.83%		
Bootstrap support for B9RK53 as seed ortholog is 100%.
Bootstrap support for A3LQA3 as seed ortholog is 99%.

Group of orthologs #299. Best score 408 bits
Score difference with first non-orthologous sequence - R.communis:408 S.stipitis:408

B9T5L2              	100.00%		A3LPA2              	100.00%
Bootstrap support for B9T5L2 as seed ortholog is 100%.
Bootstrap support for A3LPA2 as seed ortholog is 100%.

Group of orthologs #300. Best score 406 bits
Score difference with first non-orthologous sequence - R.communis:236 S.stipitis:188

B9R8C1              	100.00%		A3LQ34              	100.00%
B9RUP8              	43.03%		
B9S0G9              	40.51%		
B9RN46              	29.85%		
B9RN47              	29.60%		
B9S188              	29.35%		
B9SNT8              	29.20%		
B9RMT0              	28.76%		
B9S190              	28.31%		
B9S017              	27.62%		
B9RN45              	27.57%		
B9RKG7              	26.72%		
B9SZR6              	26.03%		
B9RN48              	26.03%		
B9S018              	25.78%		
B9SA21              	25.53%		
B9ST63              	25.33%		
B9T158              	24.54%		
B9RPJ1              	23.95%		
Bootstrap support for B9R8C1 as seed ortholog is 99%.
Bootstrap support for A3LQ34 as seed ortholog is 99%.

Group of orthologs #301. Best score 406 bits
Score difference with first non-orthologous sequence - R.communis:406 S.stipitis:5

B9SFG9              	100.00%		A3LYM8              	100.00%
Bootstrap support for B9SFG9 as seed ortholog is 100%.
Bootstrap support for A3LYM8 as seed ortholog is 45%.
Alternative seed ortholog is A3GG31 (5 bits away from this cluster)

Group of orthologs #302. Best score 405 bits
Score difference with first non-orthologous sequence - R.communis:405 S.stipitis:405

B9REL6              	100.00%		A3M0F2              	100.00%
Bootstrap support for B9REL6 as seed ortholog is 100%.
Bootstrap support for A3M0F2 as seed ortholog is 100%.

Group of orthologs #303. Best score 403 bits
Score difference with first non-orthologous sequence - R.communis:346 S.stipitis:403

B9S245              	100.00%		A3LVQ0              	100.00%
Bootstrap support for B9S245 as seed ortholog is 100%.
Bootstrap support for A3LVQ0 as seed ortholog is 100%.

Group of orthologs #304. Best score 402 bits
Score difference with first non-orthologous sequence - R.communis:402 S.stipitis:402

B9RC08              	100.00%		A3LS47              	100.00%
Bootstrap support for B9RC08 as seed ortholog is 100%.
Bootstrap support for A3LS47 as seed ortholog is 100%.

Group of orthologs #305. Best score 402 bits
Score difference with first non-orthologous sequence - R.communis:402 S.stipitis:402

B9RRP5              	100.00%		A3LW02              	100.00%
Bootstrap support for B9RRP5 as seed ortholog is 100%.
Bootstrap support for A3LW02 as seed ortholog is 100%.

Group of orthologs #306. Best score 401 bits
Score difference with first non-orthologous sequence - R.communis:401 S.stipitis:401

B9RNM4              	100.00%		A3M067              	100.00%
Bootstrap support for B9RNM4 as seed ortholog is 100%.
Bootstrap support for A3M067 as seed ortholog is 100%.

Group of orthologs #307. Best score 401 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:401

B9SRA3              	100.00%		A3LVL9              	100.00%
Bootstrap support for B9SRA3 as seed ortholog is 99%.
Bootstrap support for A3LVL9 as seed ortholog is 100%.

Group of orthologs #308. Best score 401 bits
Score difference with first non-orthologous sequence - R.communis:401 S.stipitis:17

B9SS30              	100.00%		A3M072              	100.00%
Bootstrap support for B9SS30 as seed ortholog is 100%.
Bootstrap support for A3M072 as seed ortholog is 35%.
Alternative seed ortholog is A3LUF7 (17 bits away from this cluster)

Group of orthologs #309. Best score 400 bits
Score difference with first non-orthologous sequence - R.communis:400 S.stipitis:400

B9RXQ0              	100.00%		A3GH63              	100.00%
B9SAI8              	8.88%		
Bootstrap support for B9RXQ0 as seed ortholog is 100%.
Bootstrap support for A3GH63 as seed ortholog is 100%.

Group of orthologs #310. Best score 399 bits
Score difference with first non-orthologous sequence - R.communis:399 S.stipitis:399

B9SW26              	100.00%		A3GHY8              	100.00%
Bootstrap support for B9SW26 as seed ortholog is 100%.
Bootstrap support for A3GHY8 as seed ortholog is 100%.

Group of orthologs #311. Best score 397 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:97

B9SB24              	100.00%		A3GG17              	100.00%
Bootstrap support for B9SB24 as seed ortholog is 99%.
Bootstrap support for A3GG17 as seed ortholog is 99%.

Group of orthologs #312. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:215 S.stipitis:155

B9RFP5              	100.00%		A3LUB6              	100.00%
B9RN79              	100.00%		
B9RDL4              	60.00%		
B9S8B2              	53.42%		
B9SKC0              	9.89%		
B9SKX4              	7.19%		
Bootstrap support for B9RFP5 as seed ortholog is 100%.
Bootstrap support for B9RN79 as seed ortholog is 100%.
Bootstrap support for A3LUB6 as seed ortholog is 99%.

Group of orthologs #313. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:396 S.stipitis:396

B9S742              	100.00%		A3LXQ5              	100.00%
B9RR38              	21.86%		
B9ST50              	8.74%		
Bootstrap support for B9S742 as seed ortholog is 100%.
Bootstrap support for A3LXQ5 as seed ortholog is 100%.

Group of orthologs #314. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:396 S.stipitis:396

B9T5A7              	100.00%		A3LSE9              	100.00%
B9R9Q3              	34.88%		
B9R7R7              	19.92%		
Bootstrap support for B9T5A7 as seed ortholog is 100%.
Bootstrap support for A3LSE9 as seed ortholog is 100%.

Group of orthologs #315. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:396 S.stipitis:396

B9RST2              	100.00%		A3M037              	100.00%
B9SMC0              	100.00%		
Bootstrap support for B9RST2 as seed ortholog is 100%.
Bootstrap support for B9SMC0 as seed ortholog is 100%.
Bootstrap support for A3M037 as seed ortholog is 100%.

Group of orthologs #316. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:396

B9RD92              	100.00%		A3GEY7              	100.00%
Bootstrap support for B9RD92 as seed ortholog is 99%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #317. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:396 S.stipitis:396

B9RV01              	100.00%		A3LWJ2              	100.00%
Bootstrap support for B9RV01 as seed ortholog is 100%.
Bootstrap support for A3LWJ2 as seed ortholog is 100%.

Group of orthologs #318. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:70 S.stipitis:396

B9S125              	100.00%		A3LX59              	100.00%
Bootstrap support for B9S125 as seed ortholog is 92%.
Bootstrap support for A3LX59 as seed ortholog is 100%.

Group of orthologs #319. Best score 396 bits
Score difference with first non-orthologous sequence - R.communis:396 S.stipitis:396

B9SGS2              	100.00%		A3GGS9              	100.00%
Bootstrap support for B9SGS2 as seed ortholog is 100%.
Bootstrap support for A3GGS9 as seed ortholog is 100%.

Group of orthologs #320. Best score 395 bits
Score difference with first non-orthologous sequence - R.communis:395 S.stipitis:395

B9RG59              	100.00%		A3LUK5              	100.00%
Bootstrap support for B9RG59 as seed ortholog is 100%.
Bootstrap support for A3LUK5 as seed ortholog is 100%.

Group of orthologs #321. Best score 395 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:395

B9T3K8              	100.00%		A3LY41              	100.00%
Bootstrap support for B9T3K8 as seed ortholog is 97%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #322. Best score 394 bits
Score difference with first non-orthologous sequence - R.communis:227 S.stipitis:210

B9SN70              	100.00%		A3LMX5              	100.00%
B9STJ2              	36.47%		
Bootstrap support for B9SN70 as seed ortholog is 99%.
Bootstrap support for A3LMX5 as seed ortholog is 99%.

Group of orthologs #323. Best score 394 bits
Score difference with first non-orthologous sequence - R.communis:228 S.stipitis:394

B9SUD3              	100.00%		A3GEZ4              	100.00%
Bootstrap support for B9SUD3 as seed ortholog is 100%.
Bootstrap support for A3GEZ4 as seed ortholog is 100%.

Group of orthologs #324. Best score 394 bits
Score difference with first non-orthologous sequence - R.communis:394 S.stipitis:394

B9SW18              	100.00%		A3LUH7              	100.00%
Bootstrap support for B9SW18 as seed ortholog is 100%.
Bootstrap support for A3LUH7 as seed ortholog is 100%.

Group of orthologs #325. Best score 393 bits
Score difference with first non-orthologous sequence - R.communis:173 S.stipitis:393

B9RV94              	100.00%		A3LXN7              	100.00%
Bootstrap support for B9RV94 as seed ortholog is 99%.
Bootstrap support for A3LXN7 as seed ortholog is 100%.

Group of orthologs #326. Best score 393 bits
Score difference with first non-orthologous sequence - R.communis:240 S.stipitis:393

B9SHN6              	100.00%		A3LQP9              	100.00%
Bootstrap support for B9SHN6 as seed ortholog is 100%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #327. Best score 389 bits
Score difference with first non-orthologous sequence - R.communis:389 S.stipitis:389

B9R8I9              	100.00%		A3GGB3              	100.00%
Bootstrap support for B9R8I9 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #328. Best score 389 bits
Score difference with first non-orthologous sequence - R.communis:389 S.stipitis:389

B9RC55              	100.00%		A3GID9              	100.00%
Bootstrap support for B9RC55 as seed ortholog is 100%.
Bootstrap support for A3GID9 as seed ortholog is 100%.

Group of orthologs #329. Best score 388 bits
Score difference with first non-orthologous sequence - R.communis:153 S.stipitis:198

B9S4I3              	100.00%		A3GHW9              	100.00%
Bootstrap support for B9S4I3 as seed ortholog is 99%.
Bootstrap support for A3GHW9 as seed ortholog is 100%.

Group of orthologs #330. Best score 386 bits
Score difference with first non-orthologous sequence - R.communis:275 S.stipitis:276

B9SRL4              	100.00%		A3GFR9              	100.00%
B9SN58              	56.42%		
B9S6V7              	17.25%		
Bootstrap support for B9SRL4 as seed ortholog is 100%.
Bootstrap support for A3GFR9 as seed ortholog is 100%.

Group of orthologs #331. Best score 385 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:385

B9SN22              	100.00%		A3GHH1              	100.00%
Bootstrap support for B9SN22 as seed ortholog is 92%.
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #332. Best score 384 bits
Score difference with first non-orthologous sequence - R.communis:197 S.stipitis:184

B9RZQ0              	100.00%		A3LYG4              	100.00%
Bootstrap support for B9RZQ0 as seed ortholog is 100%.
Bootstrap support for A3LYG4 as seed ortholog is 99%.

Group of orthologs #333. Best score 384 bits
Score difference with first non-orthologous sequence - R.communis:384 S.stipitis:384

B9S996              	100.00%		A3LPA1              	100.00%
Bootstrap support for B9S996 as seed ortholog is 100%.
Bootstrap support for A3LPA1 as seed ortholog is 100%.

Group of orthologs #334. Best score 383 bits
Score difference with first non-orthologous sequence - R.communis:383 S.stipitis:383

B9SGY7              	100.00%		A3GHA5              	100.00%
Bootstrap support for B9SGY7 as seed ortholog is 100%.
Bootstrap support for A3GHA5 as seed ortholog is 100%.

Group of orthologs #335. Best score 383 bits
Score difference with first non-orthologous sequence - R.communis:331 S.stipitis:383

B9ST99              	100.00%		A3LTA9              	100.00%
Bootstrap support for B9ST99 as seed ortholog is 100%.
Bootstrap support for A3LTA9 as seed ortholog is 100%.

Group of orthologs #336. Best score 380 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:380

B9SS75              	100.00%		A3LQK9              	100.00%
B9RF89              	41.66%		
B9SQ92              	39.33%		
B9T7V7              	26.36%		
B9SZS0              	22.39%		
B9RUB7              	20.92%		
B9RGU8              	20.40%		
B9RI17              	19.97%		
B9S4D1              	19.88%		
B9T846              	19.53%		
B9RG21              	16.08%		
B9RCK1              	12.96%		
B9SCD2              	11.15%		
B9S7C7              	10.89%		
Bootstrap support for B9SS75 as seed ortholog is 98%.
Bootstrap support for A3LQK9 as seed ortholog is 100%.

Group of orthologs #337. Best score 379 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:379

B9RX57              	100.00%		A3GGJ5              	100.00%
Bootstrap support for B9RX57 as seed ortholog is 97%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #338. Best score 379 bits
Score difference with first non-orthologous sequence - R.communis:379 S.stipitis:379

B9SSN7              	100.00%		A3LT38              	100.00%
Bootstrap support for B9SSN7 as seed ortholog is 100%.
Bootstrap support for A3LT38 as seed ortholog is 100%.

Group of orthologs #339. Best score 378 bits
Score difference with first non-orthologous sequence - R.communis:378 S.stipitis:378

B9RL91              	100.00%		A3GFF3              	100.00%
B9RL90              	97.86%		
Bootstrap support for B9RL91 as seed ortholog is 100%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #340. Best score 378 bits
Score difference with first non-orthologous sequence - R.communis:378 S.stipitis:378

B9T015              	100.00%		A3LTH8              	100.00%
Bootstrap support for B9T015 as seed ortholog is 100%.
Bootstrap support for A3LTH8 as seed ortholog is 100%.

Group of orthologs #341. Best score 377 bits
Score difference with first non-orthologous sequence - R.communis:377 S.stipitis:377

B9RI36              	100.00%		A3LNJ9              	100.00%
Bootstrap support for B9RI36 as seed ortholog is 100%.
Bootstrap support for A3LNJ9 as seed ortholog is 100%.

Group of orthologs #342. Best score 376 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:376

B9SBM7              	100.00%		A3LUJ3              	100.00%
B9SHI6              	69.82%		
B9RGK5              	60.35%		
Bootstrap support for B9SBM7 as seed ortholog is 98%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #343. Best score 374 bits
Score difference with first non-orthologous sequence - R.communis:260 S.stipitis:374

B9RHY3              	100.00%		A3LUY2              	100.00%
B9RHY4              	71.74%		
Bootstrap support for B9RHY3 as seed ortholog is 100%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #344. Best score 373 bits
Score difference with first non-orthologous sequence - R.communis:164 S.stipitis:373

B9RS15              	100.00%		A3LZ97              	100.00%
B9RQD8              	41.31%		
B9SFV5              	32.50%		
Bootstrap support for B9RS15 as seed ortholog is 99%.
Bootstrap support for A3LZ97 as seed ortholog is 100%.

Group of orthologs #345. Best score 372 bits
Score difference with first non-orthologous sequence - R.communis:238 S.stipitis:372

B9RYW0              	100.00%		A3LQK0              	100.00%
B9SWA7              	30.53%		
B9RQ57              	22.32%		
B9SDL4              	7.57%		
Bootstrap support for B9RYW0 as seed ortholog is 100%.
Bootstrap support for A3LQK0 as seed ortholog is 100%.

Group of orthologs #346. Best score 372 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:203

B9SVJ9              	100.00%		A3LZ69              	100.00%
Bootstrap support for B9SVJ9 as seed ortholog is 100%.
Bootstrap support for A3LZ69 as seed ortholog is 100%.

Group of orthologs #347. Best score 371 bits
Score difference with first non-orthologous sequence - R.communis:371 S.stipitis:371

B9SK07              	100.00%		A3GFN6              	100.00%
B9RPL9              	98.84%		
Bootstrap support for B9SK07 as seed ortholog is 100%.
Bootstrap support for A3GFN6 as seed ortholog is 100%.

Group of orthologs #348. Best score 370 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:370

B9S2H9              	100.00%		A3GEX9              	100.00%
Bootstrap support for B9S2H9 as seed ortholog is 99%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #349. Best score 369 bits
Score difference with first non-orthologous sequence - R.communis:369 S.stipitis:369

B9REL8              	100.00%		A3LWI9              	100.00%
Bootstrap support for B9REL8 as seed ortholog is 100%.
Bootstrap support for A3LWI9 as seed ortholog is 100%.

Group of orthologs #350. Best score 369 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:369

B9S5V2              	100.00%		A3LSC7              	100.00%
Bootstrap support for B9S5V2 as seed ortholog is 97%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #351. Best score 369 bits
Score difference with first non-orthologous sequence - R.communis:369 S.stipitis:369

B9S712              	100.00%		A3LSY2              	100.00%
Bootstrap support for B9S712 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #352. Best score 369 bits
Score difference with first non-orthologous sequence - R.communis:369 S.stipitis:369

B9T0A2              	100.00%		A3M075              	100.00%
Bootstrap support for B9T0A2 as seed ortholog is 100%.
Bootstrap support for A3M075 as seed ortholog is 100%.

Group of orthologs #353. Best score 368 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:151

B9R9C8              	100.00%		A3LU10              	100.00%
Bootstrap support for B9R9C8 as seed ortholog is 99%.
Bootstrap support for A3LU10 as seed ortholog is 98%.

Group of orthologs #354. Best score 368 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:150

B9S714              	100.00%		A3LNL1              	100.00%
Bootstrap support for B9S714 as seed ortholog is 99%.
Bootstrap support for A3LNL1 as seed ortholog is 99%.

Group of orthologs #355. Best score 368 bits
Score difference with first non-orthologous sequence - R.communis:278 S.stipitis:368

B9SIG8              	100.00%		A3LTF5              	100.00%
Bootstrap support for B9SIG8 as seed ortholog is 100%.
Bootstrap support for A3LTF5 as seed ortholog is 100%.

Group of orthologs #356. Best score 368 bits
Score difference with first non-orthologous sequence - R.communis:368 S.stipitis:368

B9SEX9              	100.00%		A3LY60              	100.00%
Bootstrap support for B9SEX9 as seed ortholog is 100%.
Bootstrap support for A3LY60 as seed ortholog is 100%.

Group of orthologs #357. Best score 366 bits
Score difference with first non-orthologous sequence - R.communis:366 S.stipitis:366

B9T479              	100.00%		A3LNS7              	100.00%
Bootstrap support for B9T479 as seed ortholog is 100%.
Bootstrap support for A3LNS7 as seed ortholog is 100%.

Group of orthologs #358. Best score 365 bits
Score difference with first non-orthologous sequence - R.communis:365 S.stipitis:365

B9RUV2              	100.00%		A3LZA5              	100.00%
Bootstrap support for B9RUV2 as seed ortholog is 100%.
Bootstrap support for A3LZA5 as seed ortholog is 100%.

Group of orthologs #359. Best score 365 bits
Score difference with first non-orthologous sequence - R.communis:365 S.stipitis:365

B9SYR4              	100.00%		A3LPS9              	100.00%
Bootstrap support for B9SYR4 as seed ortholog is 100%.
Bootstrap support for A3LPS9 as seed ortholog is 100%.

Group of orthologs #360. Best score 365 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:365

B9SSI1              	100.00%		A3LZS7              	100.00%
Bootstrap support for B9SSI1 as seed ortholog is 94%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #361. Best score 364 bits
Score difference with first non-orthologous sequence - R.communis:364 S.stipitis:364

B9S4I8              	100.00%		A3GG46              	100.00%
Bootstrap support for B9S4I8 as seed ortholog is 100%.
Bootstrap support for A3GG46 as seed ortholog is 100%.

Group of orthologs #362. Best score 364 bits
Score difference with first non-orthologous sequence - R.communis:224 S.stipitis:364

B9SVA1              	100.00%		A3LYY4              	100.00%
Bootstrap support for B9SVA1 as seed ortholog is 100%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #363. Best score 364 bits
Score difference with first non-orthologous sequence - R.communis:364 S.stipitis:364

B9T2K9              	100.00%		A3LYX3              	100.00%
Bootstrap support for B9T2K9 as seed ortholog is 100%.
Bootstrap support for A3LYX3 as seed ortholog is 100%.

Group of orthologs #364. Best score 363 bits
Score difference with first non-orthologous sequence - R.communis:363 S.stipitis:363

B9RG48              	100.00%		A3GFG0              	100.00%
B9RPJ9              	100.00%		A3LZ47              	100.00%
Bootstrap support for B9RG48 as seed ortholog is 100%.
Bootstrap support for B9RPJ9 as seed ortholog is 100%.
Bootstrap support for A3GFG0 as seed ortholog is 100%.
Bootstrap support for A3LZ47 as seed ortholog is 100%.

Group of orthologs #365. Best score 363 bits
Score difference with first non-orthologous sequence - R.communis:133 S.stipitis:363

B9SL55              	100.00%		A3LWR7              	100.00%
Bootstrap support for B9SL55 as seed ortholog is 98%.
Bootstrap support for A3LWR7 as seed ortholog is 100%.

Group of orthologs #366. Best score 362 bits
Score difference with first non-orthologous sequence - R.communis:362 S.stipitis:362

B9RVB2              	100.00%		A3M042              	100.00%
Bootstrap support for B9RVB2 as seed ortholog is 100%.
Bootstrap support for A3M042 as seed ortholog is 100%.

Group of orthologs #367. Best score 361 bits
Score difference with first non-orthologous sequence - R.communis:361 S.stipitis:361

B9SNW1              	100.00%		A3GHR1              	100.00%
B9SR96              	59.91%		
B9SR94              	52.92%		
B9S7C2              	20.26%		
Bootstrap support for B9SNW1 as seed ortholog is 100%.
Bootstrap support for A3GHR1 as seed ortholog is 100%.

Group of orthologs #368. Best score 361 bits
Score difference with first non-orthologous sequence - R.communis:361 S.stipitis:361

B9SUT4              	100.00%		A3LS81              	100.00%
Bootstrap support for B9SUT4 as seed ortholog is 100%.
Bootstrap support for A3LS81 as seed ortholog is 100%.

Group of orthologs #369. Best score 360 bits
Score difference with first non-orthologous sequence - R.communis:360 S.stipitis:360

B9SDY2              	100.00%		A3GF81              	100.00%
B9SDY1              	92.27%		
B9SY71              	32.09%		
B9RHU5              	14.97%		
Bootstrap support for B9SDY2 as seed ortholog is 100%.
Bootstrap support for A3GF81 as seed ortholog is 100%.

Group of orthologs #370. Best score 360 bits
Score difference with first non-orthologous sequence - R.communis:360 S.stipitis:360

B9SI31              	100.00%		A3LRB4              	100.00%
B9SQ22              	51.42%		
B9RQN9              	19.15%		
Bootstrap support for B9SI31 as seed ortholog is 100%.
Bootstrap support for A3LRB4 as seed ortholog is 100%.

Group of orthologs #371. Best score 360 bits
Score difference with first non-orthologous sequence - R.communis:360 S.stipitis:360

B9SIE0              	100.00%		A3LWI4              	100.00%
Bootstrap support for B9SIE0 as seed ortholog is 100%.
Bootstrap support for A3LWI4 as seed ortholog is 100%.

Group of orthologs #372. Best score 359 bits
Score difference with first non-orthologous sequence - R.communis:359 S.stipitis:144

B9RBN9              	100.00%		A3GF66              	100.00%
Bootstrap support for B9RBN9 as seed ortholog is 100%.
Bootstrap support for A3GF66 as seed ortholog is 99%.

Group of orthologs #373. Best score 359 bits
Score difference with first non-orthologous sequence - R.communis:359 S.stipitis:359

B9SV11              	100.00%		A3LP98              	100.00%
Bootstrap support for B9SV11 as seed ortholog is 100%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #374. Best score 358 bits
Score difference with first non-orthologous sequence - R.communis:220 S.stipitis:210

B9SX92              	100.00%		A3LV40              	100.00%
Bootstrap support for B9SX92 as seed ortholog is 100%.
Bootstrap support for A3LV40 as seed ortholog is 99%.

Group of orthologs #375. Best score 357 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:268

B9SCC1              	100.00%		A3LXZ1              	100.00%
Bootstrap support for B9SCC1 as seed ortholog is 100%.
Bootstrap support for A3LXZ1 as seed ortholog is 100%.

Group of orthologs #376. Best score 356 bits
Score difference with first non-orthologous sequence - R.communis:356 S.stipitis:356

B9RH79              	100.00%		A3GG41              	100.00%
B9R7Y4              	63.86%		
Bootstrap support for B9RH79 as seed ortholog is 100%.
Bootstrap support for A3GG41 as seed ortholog is 100%.

Group of orthologs #377. Best score 356 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:283

B9SA06              	100.00%		A3LU60              	100.00%
B9RXV1              	45.52%		
Bootstrap support for B9SA06 as seed ortholog is 97%.
Bootstrap support for A3LU60 as seed ortholog is 100%.

Group of orthologs #378. Best score 356 bits
Score difference with first non-orthologous sequence - R.communis:136 S.stipitis:356

B9T0D8              	100.00%		A3LVC2              	100.00%
Bootstrap support for B9T0D8 as seed ortholog is 99%.
Bootstrap support for A3LVC2 as seed ortholog is 100%.

Group of orthologs #379. Best score 355 bits
Score difference with first non-orthologous sequence - R.communis:36 S.stipitis:355

B9RUS0              	100.00%		A3GH59              	100.00%
B9RZX0              	17.14%		
Bootstrap support for B9RUS0 as seed ortholog is 61%.
Alternative seed ortholog is B9RXC4 (36 bits away from this cluster)
Bootstrap support for A3GH59 as seed ortholog is 100%.

Group of orthologs #380. Best score 354 bits
Score difference with first non-orthologous sequence - R.communis:4 S.stipitis:354

B9RJN7              	100.00%		A3LXG8              	100.00%
B9RJU7              	9.52%		
Bootstrap support for B9RJN7 as seed ortholog is 55%.
Alternative seed ortholog is B9RJK9 (4 bits away from this cluster)
Bootstrap support for A3LXG8 as seed ortholog is 100%.

Group of orthologs #381. Best score 354 bits
Score difference with first non-orthologous sequence - R.communis:212 S.stipitis:154

B9S0K1              	100.00%		A3LNB3              	100.00%
Bootstrap support for B9S0K1 as seed ortholog is 100%.
Bootstrap support for A3LNB3 as seed ortholog is 99%.

Group of orthologs #382. Best score 353 bits
Score difference with first non-orthologous sequence - R.communis:353 S.stipitis:353

B9SVJ6              	100.00%		A3M001              	100.00%
B9S916              	67.46%		
B9S3C2              	25.06%		
Bootstrap support for B9SVJ6 as seed ortholog is 100%.
Bootstrap support for A3M001 as seed ortholog is 100%.

Group of orthologs #383. Best score 352 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:83

B9RGV9              	100.00%		A3LMX1              	100.00%
Bootstrap support for B9RGV9 as seed ortholog is 100%.
Bootstrap support for A3LMX1 as seed ortholog is 99%.

Group of orthologs #384. Best score 352 bits
Score difference with first non-orthologous sequence - R.communis:352 S.stipitis:352

B9RLI9              	100.00%		A3LWQ5              	100.00%
Bootstrap support for B9RLI9 as seed ortholog is 100%.
Bootstrap support for A3LWQ5 as seed ortholog is 100%.

Group of orthologs #385. Best score 351 bits
Score difference with first non-orthologous sequence - R.communis:236 S.stipitis:351

B9RJY0              	100.00%		A3LTK0              	100.00%
B9T895              	56.35%		
Bootstrap support for B9RJY0 as seed ortholog is 99%.
Bootstrap support for A3LTK0 as seed ortholog is 100%.

Group of orthologs #386. Best score 351 bits
Score difference with first non-orthologous sequence - R.communis:351 S.stipitis:351

B9SJ28              	100.00%		A3LSG9              	100.00%
Bootstrap support for B9SJ28 as seed ortholog is 100%.
Bootstrap support for A3LSG9 as seed ortholog is 100%.

Group of orthologs #387. Best score 350 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:19

B9SW68              	100.00%		A3GF15              	100.00%
B9RCG7              	57.21%		A3LY05              	13.95%
B9RDW5              	56.48%		
B9SFT4              	47.19%		
B9R7Z1              	18.34%		
B9S6A3              	15.40%		
B9T1Z7              	14.18%		
Bootstrap support for B9SW68 as seed ortholog is 92%.
Bootstrap support for A3GF15 as seed ortholog is 66%.
Alternative seed ortholog is A3LN91 (19 bits away from this cluster)

Group of orthologs #388. Best score 350 bits
Score difference with first non-orthologous sequence - R.communis:350 S.stipitis:350

B9RXC7              	100.00%		A3LZU4              	100.00%
Bootstrap support for B9RXC7 as seed ortholog is 100%.
Bootstrap support for A3LZU4 as seed ortholog is 100%.

Group of orthologs #389. Best score 349 bits
Score difference with first non-orthologous sequence - R.communis:349 S.stipitis:94

B9RKN9              	100.00%		A3LZ01              	100.00%
B9RS47              	80.13%		
B9RS46              	53.06%		
B9SW33              	10.70%		
B9SZA2              	5.90%		
Bootstrap support for B9RKN9 as seed ortholog is 100%.
Bootstrap support for A3LZ01 as seed ortholog is 99%.

Group of orthologs #390. Best score 349 bits
Score difference with first non-orthologous sequence - R.communis:349 S.stipitis:349

B9SS01              	100.00%		A3GI60              	100.00%
Bootstrap support for B9SS01 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 100%.

Group of orthologs #391. Best score 348 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:78

Q0PGF2              	100.00%		A3M086              	100.00%
B9RQ46              	79.92%		
B9RD31              	48.15%		
Bootstrap support for Q0PGF2 as seed ortholog is 99%.
Bootstrap support for A3M086 as seed ortholog is 88%.

Group of orthologs #392. Best score 348 bits
Score difference with first non-orthologous sequence - R.communis:348 S.stipitis:348

B9S917              	100.00%		A3LTN8              	100.00%
Bootstrap support for B9S917 as seed ortholog is 100%.
Bootstrap support for A3LTN8 as seed ortholog is 100%.

Group of orthologs #393. Best score 348 bits
Score difference with first non-orthologous sequence - R.communis:348 S.stipitis:348

B9SWX3              	100.00%		A3LW59              	100.00%
Bootstrap support for B9SWX3 as seed ortholog is 100%.
Bootstrap support for A3LW59 as seed ortholog is 100%.

Group of orthologs #394. Best score 347 bits
Score difference with first non-orthologous sequence - R.communis:75 S.stipitis:347

B9RIU8              	100.00%		A3GEZ8              	100.00%
Bootstrap support for B9RIU8 as seed ortholog is 99%.
Bootstrap support for A3GEZ8 as seed ortholog is 100%.

Group of orthologs #395. Best score 347 bits
Score difference with first non-orthologous sequence - R.communis:249 S.stipitis:256

B9RP86              	100.00%		A3LW11              	100.00%
Bootstrap support for B9RP86 as seed ortholog is 100%.
Bootstrap support for A3LW11 as seed ortholog is 100%.

Group of orthologs #396. Best score 347 bits
Score difference with first non-orthologous sequence - R.communis:347 S.stipitis:347

B9S7I5              	100.00%		A3LWT7              	100.00%
Bootstrap support for B9S7I5 as seed ortholog is 100%.
Bootstrap support for A3LWT7 as seed ortholog is 100%.

Group of orthologs #397. Best score 347 bits
Score difference with first non-orthologous sequence - R.communis:347 S.stipitis:347

B9SKC3              	100.00%		A3LWV7              	100.00%
Bootstrap support for B9SKC3 as seed ortholog is 100%.
Bootstrap support for A3LWV7 as seed ortholog is 100%.

Group of orthologs #398. Best score 346 bits
Score difference with first non-orthologous sequence - R.communis:346 S.stipitis:346

B9R8Z3              	100.00%		A3LYW2              	100.00%
Bootstrap support for B9R8Z3 as seed ortholog is 100%.
Bootstrap support for A3LYW2 as seed ortholog is 100%.

Group of orthologs #399. Best score 346 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:346

B9RQ63              	100.00%		A3LS93              	100.00%
Bootstrap support for B9RQ63 as seed ortholog is 99%.
Bootstrap support for A3LS93 as seed ortholog is 100%.

Group of orthologs #400. Best score 346 bits
Score difference with first non-orthologous sequence - R.communis:346 S.stipitis:346

B9S7K4              	100.00%		A3LQ91              	100.00%
Bootstrap support for B9S7K4 as seed ortholog is 100%.
Bootstrap support for A3LQ91 as seed ortholog is 100%.

Group of orthologs #401. Best score 344 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:344

B9SFB6              	100.00%		A3GHE2              	100.00%
B9RW72              	58.11%		
B9RW71              	46.97%		
Bootstrap support for B9SFB6 as seed ortholog is 97%.
Bootstrap support for A3GHE2 as seed ortholog is 100%.

Group of orthologs #402. Best score 344 bits
Score difference with first non-orthologous sequence - R.communis:344 S.stipitis:344

B9SJW7              	100.00%		A3GGE7              	100.00%
Bootstrap support for B9SJW7 as seed ortholog is 100%.
Bootstrap support for A3GGE7 as seed ortholog is 100%.

Group of orthologs #403. Best score 344 bits
Score difference with first non-orthologous sequence - R.communis:344 S.stipitis:344

B9SSV2              	100.00%		A3GI64              	100.00%
Bootstrap support for B9SSV2 as seed ortholog is 100%.
Bootstrap support for A3GI64 as seed ortholog is 100%.

Group of orthologs #404. Best score 343 bits
Score difference with first non-orthologous sequence - R.communis:343 S.stipitis:343

B9RTW5              	100.00%		A3LUU1              	100.00%
Bootstrap support for B9RTW5 as seed ortholog is 100%.
Bootstrap support for A3LUU1 as seed ortholog is 100%.

Group of orthologs #405. Best score 343 bits
Score difference with first non-orthologous sequence - R.communis:343 S.stipitis:343

B9S4R6              	100.00%		A3LPA3              	100.00%
Bootstrap support for B9S4R6 as seed ortholog is 100%.
Bootstrap support for A3LPA3 as seed ortholog is 100%.

Group of orthologs #406. Best score 343 bits
Score difference with first non-orthologous sequence - R.communis:343 S.stipitis:343

B9S643              	100.00%		A3LU56              	100.00%
Bootstrap support for B9S643 as seed ortholog is 100%.
Bootstrap support for A3LU56 as seed ortholog is 100%.

Group of orthologs #407. Best score 343 bits
Score difference with first non-orthologous sequence - R.communis:197 S.stipitis:164

B9SRZ2              	100.00%		A3LYS8              	100.00%
Bootstrap support for B9SRZ2 as seed ortholog is 100%.
Bootstrap support for A3LYS8 as seed ortholog is 99%.

Group of orthologs #408. Best score 342 bits
Score difference with first non-orthologous sequence - R.communis:342 S.stipitis:342

B9SDP2              	100.00%		A3GI83              	100.00%
                    	       		A3GEX0              	14.20%
                    	       		A3LTY9              	13.59%
Bootstrap support for B9SDP2 as seed ortholog is 100%.
Bootstrap support for A3GI83 as seed ortholog is 100%.

Group of orthologs #409. Best score 342 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:342

B9T5L9              	100.00%		A3LR17              	100.00%
B9RLL4              	31.63%		
Bootstrap support for B9T5L9 as seed ortholog is 98%.
Bootstrap support for A3LR17 as seed ortholog is 100%.

Group of orthologs #410. Best score 342 bits
Score difference with first non-orthologous sequence - R.communis:342 S.stipitis:342

B9SA39              	100.00%		A3LZT6              	100.00%
Bootstrap support for B9SA39 as seed ortholog is 100%.
Bootstrap support for A3LZT6 as seed ortholog is 100%.

Group of orthologs #411. Best score 341 bits
Score difference with first non-orthologous sequence - R.communis:341 S.stipitis:341

B9SKH7              	100.00%		A3LV50              	100.00%
B9RDN0              	53.01%		
B9RQE8              	10.83%		
B9RS07              	10.71%		
B9RKI6              	10.49%		
Bootstrap support for B9SKH7 as seed ortholog is 100%.
Bootstrap support for A3LV50 as seed ortholog is 100%.

Group of orthologs #412. Best score 341 bits
Score difference with first non-orthologous sequence - R.communis:341 S.stipitis:341

P49318              	100.00%		A3LNL4              	100.00%
B9R8N4              	98.74%		
Q01297              	73.21%		
B9S6U0              	68.72%		
Bootstrap support for P49318 as seed ortholog is 100%.
Bootstrap support for A3LNL4 as seed ortholog is 100%.

Group of orthologs #413. Best score 340 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:28

B9S554              	100.00%		A3LZQ3              	100.00%
B9RWL7              	63.62%		
Bootstrap support for B9S554 as seed ortholog is 99%.
Bootstrap support for A3LZQ3 as seed ortholog is 77%.

Group of orthologs #414. Best score 340 bits
Score difference with first non-orthologous sequence - R.communis:244 S.stipitis:340

B9RIC6              	100.00%		A3LW26              	100.00%
Bootstrap support for B9RIC6 as seed ortholog is 100%.
Bootstrap support for A3LW26 as seed ortholog is 100%.

Group of orthologs #415. Best score 339 bits
Score difference with first non-orthologous sequence - R.communis:246 S.stipitis:276

B9RUT7              	100.00%		A3M028              	100.00%
                    	       		A3M029              	75.96%
Bootstrap support for B9RUT7 as seed ortholog is 100%.
Bootstrap support for A3M028 as seed ortholog is 100%.

Group of orthologs #416. Best score 339 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:172

B9S466              	100.00%		A3LX02              	100.00%
Bootstrap support for B9S466 as seed ortholog is 99%.
Bootstrap support for A3LX02 as seed ortholog is 99%.

Group of orthologs #417. Best score 338 bits
Score difference with first non-orthologous sequence - R.communis:262 S.stipitis:338

B9RN20              	100.00%		A3GFH8              	100.00%
Bootstrap support for B9RN20 as seed ortholog is 100%.
Bootstrap support for A3GFH8 as seed ortholog is 100%.

Group of orthologs #418. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:277 S.stipitis:337

B9SE47              	100.00%		A3GGD9              	100.00%
B9S977              	68.17%		
B9S7S1              	29.43%		
B9T172              	26.43%		
Bootstrap support for B9SE47 as seed ortholog is 100%.
Bootstrap support for A3GGD9 as seed ortholog is 100%.

Group of orthologs #419. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:337 S.stipitis:6

B9RPE0              	100.00%		A3LUP1              	100.00%
Bootstrap support for B9RPE0 as seed ortholog is 100%.
Bootstrap support for A3LUP1 as seed ortholog is 43%.
Alternative seed ortholog is A3LP28 (6 bits away from this cluster)

Group of orthologs #420. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:133

B9S331              	100.00%		A3LNZ4              	100.00%
Bootstrap support for B9S331 as seed ortholog is 100%.
Bootstrap support for A3LNZ4 as seed ortholog is 99%.

Group of orthologs #421. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:337 S.stipitis:337

B9RZW2              	100.00%		A3LV82              	100.00%
Bootstrap support for B9RZW2 as seed ortholog is 100%.
Bootstrap support for A3LV82 as seed ortholog is 100%.

Group of orthologs #422. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:337

B9ST15              	100.00%		A3GI57              	100.00%
Bootstrap support for B9ST15 as seed ortholog is 99%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #423. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:337

B9T2G5              	100.00%		A3GEU3              	100.00%
Bootstrap support for B9T2G5 as seed ortholog is 99%.
Bootstrap support for A3GEU3 as seed ortholog is 100%.

Group of orthologs #424. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:236 S.stipitis:265

B9SU88              	100.00%		A3LWH7              	100.00%
Bootstrap support for B9SU88 as seed ortholog is 100%.
Bootstrap support for A3LWH7 as seed ortholog is 100%.

Group of orthologs #425. Best score 337 bits
Score difference with first non-orthologous sequence - R.communis:337 S.stipitis:337

B9T718              	100.00%		A3LQG4              	100.00%
Bootstrap support for B9T718 as seed ortholog is 100%.
Bootstrap support for A3LQG4 as seed ortholog is 100%.

Group of orthologs #426. Best score 336 bits
Score difference with first non-orthologous sequence - R.communis:336 S.stipitis:336

B9RDW8              	100.00%		A3LST9              	100.00%
                    	       		A3LZ17              	23.99%
                    	       		A3LZ45              	6.88%
Bootstrap support for B9RDW8 as seed ortholog is 100%.
Bootstrap support for A3LST9 as seed ortholog is 100%.

Group of orthologs #427. Best score 336 bits
Score difference with first non-orthologous sequence - R.communis:336 S.stipitis:336

B9RJ08              	100.00%		A3LTA3              	100.00%
Bootstrap support for B9RJ08 as seed ortholog is 100%.
Bootstrap support for A3LTA3 as seed ortholog is 100%.

Group of orthologs #428. Best score 336 bits
Score difference with first non-orthologous sequence - R.communis:336 S.stipitis:336

B9ST43              	100.00%		A3LYF4              	100.00%
Bootstrap support for B9ST43 as seed ortholog is 100%.
Bootstrap support for A3LYF4 as seed ortholog is 100%.

Group of orthologs #429. Best score 334 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:334

A1X860              	100.00%		A3LVT4              	100.00%
B9RF63              	66.67%		A3LT24              	30.53%
B9RZF1              	10.61%		A3LPC6              	27.75%
B9RNA5              	8.38%		A3LZE8              	17.64%
                    	       		A3LPV7              	16.56%
Bootstrap support for A1X860 as seed ortholog is 99%.
Bootstrap support for A3LVT4 as seed ortholog is 100%.

Group of orthologs #430. Best score 334 bits
Score difference with first non-orthologous sequence - R.communis:334 S.stipitis:334

B9SYU2              	100.00%		A3LT23              	100.00%
B9R8C3              	75.27%		
Bootstrap support for B9SYU2 as seed ortholog is 100%.
Bootstrap support for A3LT23 as seed ortholog is 100%.

Group of orthologs #431. Best score 334 bits
Score difference with first non-orthologous sequence - R.communis:334 S.stipitis:334

B9RMG4              	100.00%		A3GH62              	100.00%
Bootstrap support for B9RMG4 as seed ortholog is 100%.
Bootstrap support for A3GH62 as seed ortholog is 100%.

Group of orthologs #432. Best score 333 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:333

B9T3J4              	100.00%		A3LXT8              	100.00%
B9T432              	38.73%		
B9SWG6              	32.42%		
Bootstrap support for B9T3J4 as seed ortholog is 98%.
Bootstrap support for A3LXT8 as seed ortholog is 100%.

Group of orthologs #433. Best score 333 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:333

B9RAV9              	100.00%		A3LNA9              	100.00%
B9SPK3              	78.70%		
Bootstrap support for B9RAV9 as seed ortholog is 97%.
Bootstrap support for A3LNA9 as seed ortholog is 100%.

Group of orthologs #434. Best score 333 bits
Score difference with first non-orthologous sequence - R.communis:333 S.stipitis:333

B9SS35              	100.00%		A3GH36              	100.00%
B9S599              	89.48%		
Bootstrap support for B9SS35 as seed ortholog is 100%.
Bootstrap support for A3GH36 as seed ortholog is 100%.

Group of orthologs #435. Best score 333 bits
Score difference with first non-orthologous sequence - R.communis:333 S.stipitis:88

B9RNY6              	100.00%		A3GGR0              	100.00%
Bootstrap support for B9RNY6 as seed ortholog is 100%.
Bootstrap support for A3GGR0 as seed ortholog is 98%.

Group of orthologs #436. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:332 S.stipitis:332

B9RER3              	100.00%		A3LX67              	100.00%
B9RTL6              	72.34%		A3LUW5              	84.15%
Bootstrap support for B9RER3 as seed ortholog is 100%.
Bootstrap support for A3LX67 as seed ortholog is 100%.

Group of orthologs #437. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:107

B9RA83              	100.00%		A3LU37              	100.00%
B9RH00              	100.00%		
Bootstrap support for B9RA83 as seed ortholog is 99%.
Bootstrap support for B9RH00 as seed ortholog is 99%.
Bootstrap support for A3LU37 as seed ortholog is 99%.

Group of orthologs #438. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:332

B9RKB5              	100.00%		A3GGS1              	100.00%
Bootstrap support for B9RKB5 as seed ortholog is 99%.
Bootstrap support for A3GGS1 as seed ortholog is 100%.

Group of orthologs #439. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:332 S.stipitis:332

B9RMB8              	100.00%		A3LPY6              	100.00%
Bootstrap support for B9RMB8 as seed ortholog is 100%.
Bootstrap support for A3LPY6 as seed ortholog is 100%.

Group of orthologs #440. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:332 S.stipitis:332

B9SR86              	100.00%		A3GFK2              	100.00%
Bootstrap support for B9SR86 as seed ortholog is 100%.
Bootstrap support for A3GFK2 as seed ortholog is 100%.

Group of orthologs #441. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:332 S.stipitis:332

B9SE11              	100.00%		A3LZI8              	100.00%
Bootstrap support for B9SE11 as seed ortholog is 100%.
Bootstrap support for A3LZI8 as seed ortholog is 100%.

Group of orthologs #442. Best score 332 bits
Score difference with first non-orthologous sequence - R.communis:23 S.stipitis:332

B9SLS5              	100.00%		A3M027              	100.00%
Bootstrap support for B9SLS5 as seed ortholog is 70%.
Alternative seed ortholog is B9T7U2 (23 bits away from this cluster)
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #443. Best score 330 bits
Score difference with first non-orthologous sequence - R.communis:8 S.stipitis:65

B9S1V5              	100.00%		A3LXZ6              	100.00%
B9R8U3              	30.77%		
Bootstrap support for B9S1V5 as seed ortholog is 56%.
Alternative seed ortholog is B9SXW1 (8 bits away from this cluster)
Bootstrap support for A3LXZ6 as seed ortholog is 95%.

Group of orthologs #444. Best score 330 bits
Score difference with first non-orthologous sequence - R.communis:152 S.stipitis:330

B9RUC5              	100.00%		A3LTL9              	100.00%
Bootstrap support for B9RUC5 as seed ortholog is 99%.
Bootstrap support for A3LTL9 as seed ortholog is 100%.

Group of orthologs #445. Best score 329 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:329

B9SIL8              	100.00%		A3LR95              	100.00%
B9T0A5              	51.59%		
B9SI51              	31.74%		
B9SIL5              	23.60%		
B9RIF1              	23.03%		
B9RIF0              	19.76%		
B9SU45              	14.79%		
B9SCH2              	7.12%		
Bootstrap support for B9SIL8 as seed ortholog is 96%.
Bootstrap support for A3LR95 as seed ortholog is 100%.

Group of orthologs #446. Best score 328 bits
Score difference with first non-orthologous sequence - R.communis:17 S.stipitis:115

B9RN88              	100.00%		A3LZR8              	100.00%
B9S633              	84.21%		A3LYV6              	75.68%
Bootstrap support for B9RN88 as seed ortholog is 86%.
Bootstrap support for A3LZR8 as seed ortholog is 100%.

Group of orthologs #447. Best score 328 bits
Score difference with first non-orthologous sequence - R.communis:328 S.stipitis:328

B9RK90              	100.00%		A3GGB7              	100.00%
B9S5V5              	58.77%		
Bootstrap support for B9RK90 as seed ortholog is 100%.
Bootstrap support for A3GGB7 as seed ortholog is 100%.

Group of orthologs #448. Best score 328 bits
Score difference with first non-orthologous sequence - R.communis:328 S.stipitis:328

B9R875              	100.00%		A3LVJ1              	100.00%
Bootstrap support for B9R875 as seed ortholog is 100%.
Bootstrap support for A3LVJ1 as seed ortholog is 100%.

Group of orthologs #449. Best score 327 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:327

B9RJ88              	100.00%		A3GI75              	100.00%
B9T1U3              	56.46%		
Bootstrap support for B9RJ88 as seed ortholog is 99%.
Bootstrap support for A3GI75 as seed ortholog is 100%.

Group of orthologs #450. Best score 325 bits
Score difference with first non-orthologous sequence - R.communis:325 S.stipitis:325

B9RJX6              	100.00%		A3LY71              	100.00%
Bootstrap support for B9RJX6 as seed ortholog is 100%.
Bootstrap support for A3LY71 as seed ortholog is 100%.

Group of orthologs #451. Best score 324 bits
Score difference with first non-orthologous sequence - R.communis:324 S.stipitis:324

B9T6N0              	100.00%		A3LQ06              	100.00%
Bootstrap support for B9T6N0 as seed ortholog is 100%.
Bootstrap support for A3LQ06 as seed ortholog is 100%.

Group of orthologs #452. Best score 323 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:323

B9RMK4              	100.00%		A3GFY2              	100.00%
                    	       		A3GF02              	33.64%
Bootstrap support for B9RMK4 as seed ortholog is 94%.
Bootstrap support for A3GFY2 as seed ortholog is 100%.

Group of orthologs #453. Best score 323 bits
Score difference with first non-orthologous sequence - R.communis:323 S.stipitis:323

B9S6E0              	100.00%		A3LSU9              	100.00%
Bootstrap support for B9S6E0 as seed ortholog is 100%.
Bootstrap support for A3LSU9 as seed ortholog is 100%.

Group of orthologs #454. Best score 322 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:322

B9R9U6              	100.00%		A3LSE0              	100.00%
Bootstrap support for B9R9U6 as seed ortholog is 100%.
Bootstrap support for A3LSE0 as seed ortholog is 100%.

Group of orthologs #455. Best score 321 bits
Score difference with first non-orthologous sequence - R.communis:241 S.stipitis:239

B9RGB3              	100.00%		A3GFN3              	100.00%
Bootstrap support for B9RGB3 as seed ortholog is 100%.
Bootstrap support for A3GFN3 as seed ortholog is 100%.

Group of orthologs #456. Best score 320 bits
Score difference with first non-orthologous sequence - R.communis:320 S.stipitis:320

B9S6W8              	100.00%		A3LWV1              	100.00%
B9R8R2              	9.16%		
Bootstrap support for B9S6W8 as seed ortholog is 100%.
Bootstrap support for A3LWV1 as seed ortholog is 100%.

Group of orthologs #457. Best score 320 bits
Score difference with first non-orthologous sequence - R.communis:320 S.stipitis:320

B9S5A3              	100.00%		A3LYL4              	100.00%
Bootstrap support for B9S5A3 as seed ortholog is 100%.
Bootstrap support for A3LYL4 as seed ortholog is 100%.

Group of orthologs #458. Best score 319 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:198

B9RI18              	100.00%		A3GF49              	100.00%
B9SWS8              	8.78%		
Bootstrap support for B9RI18 as seed ortholog is 99%.
Bootstrap support for A3GF49 as seed ortholog is 100%.

Group of orthologs #459. Best score 318 bits
Score difference with first non-orthologous sequence - R.communis:145 S.stipitis:318

B9RT93              	100.00%		A3LYA4              	100.00%
B9RT92              	91.57%		
Bootstrap support for B9RT93 as seed ortholog is 99%.
Bootstrap support for A3LYA4 as seed ortholog is 100%.

Group of orthologs #460. Best score 318 bits
Score difference with first non-orthologous sequence - R.communis:115 S.stipitis:111

B9RHY9              	100.00%		A3LP87              	100.00%
Bootstrap support for B9RHY9 as seed ortholog is 99%.
Bootstrap support for A3LP87 as seed ortholog is 99%.

Group of orthologs #461. Best score 317 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:174

B9SLR6              	100.00%		A3LWH3              	100.00%
Bootstrap support for B9SLR6 as seed ortholog is 99%.
Bootstrap support for A3LWH3 as seed ortholog is 99%.

Group of orthologs #462. Best score 316 bits
Score difference with first non-orthologous sequence - R.communis:316 S.stipitis:316

B9RUH7              	100.00%		A3LX91              	100.00%
B9S2H7              	49.08%		
Bootstrap support for B9RUH7 as seed ortholog is 100%.
Bootstrap support for A3LX91 as seed ortholog is 100%.

Group of orthologs #463. Best score 316 bits
Score difference with first non-orthologous sequence - R.communis:316 S.stipitis:316

B9SFU0              	100.00%		A3LPI4              	100.00%
B9SEY9              	75.53%		
Bootstrap support for B9SFU0 as seed ortholog is 100%.
Bootstrap support for A3LPI4 as seed ortholog is 100%.

Group of orthologs #464. Best score 316 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:146

B9RGI1              	100.00%		A3LSV1              	100.00%
Bootstrap support for B9RGI1 as seed ortholog is 98%.
Bootstrap support for A3LSV1 as seed ortholog is 99%.

Group of orthologs #465. Best score 316 bits
Score difference with first non-orthologous sequence - R.communis:316 S.stipitis:316

B9SWD5              	100.00%		A3LRR6              	100.00%
Bootstrap support for B9SWD5 as seed ortholog is 100%.
Bootstrap support for A3LRR6 as seed ortholog is 100%.

Group of orthologs #466. Best score 315 bits
Score difference with first non-orthologous sequence - R.communis:315 S.stipitis:315

B9RBN7              	100.00%		A3LPV0              	100.00%
Bootstrap support for B9RBN7 as seed ortholog is 100%.
Bootstrap support for A3LPV0 as seed ortholog is 100%.

Group of orthologs #467. Best score 315 bits
Score difference with first non-orthologous sequence - R.communis:315 S.stipitis:315

B9S2W1              	100.00%		A3LWJ5              	100.00%
Bootstrap support for B9S2W1 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #468. Best score 314 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:84

B9T7V2              	100.00%		A3LYB2              	100.00%
B9RIK2              	33.33%		
B9RB51              	18.09%		
Bootstrap support for B9T7V2 as seed ortholog is 100%.
Bootstrap support for A3LYB2 as seed ortholog is 99%.

Group of orthologs #469. Best score 313 bits
Score difference with first non-orthologous sequence - R.communis:313 S.stipitis:313

B9R9V2              	100.00%		A3M095              	100.00%
B9SXE2              	100.00%		
Bootstrap support for B9R9V2 as seed ortholog is 100%.
Bootstrap support for B9SXE2 as seed ortholog is 100%.
Bootstrap support for A3M095 as seed ortholog is 100%.

Group of orthologs #470. Best score 313 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:313

B9S1L9              	100.00%		A3LMX2              	100.00%
B9RK18              	25.20%		
Bootstrap support for B9S1L9 as seed ortholog is 61%.
Alternative seed ortholog is B9RLN2 (18 bits away from this cluster)
Bootstrap support for A3LMX2 as seed ortholog is 100%.

Group of orthologs #471. Best score 312 bits
Score difference with first non-orthologous sequence - R.communis:312 S.stipitis:312

B9RIB2              	100.00%		A3GFH5              	100.00%
B9RIC4              	100.00%		
Bootstrap support for B9RIB2 as seed ortholog is 100%.
Bootstrap support for B9RIC4 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #472. Best score 312 bits
Score difference with first non-orthologous sequence - R.communis:173 S.stipitis:312

B9RVK1              	100.00%		A3LQV2              	100.00%
Bootstrap support for B9RVK1 as seed ortholog is 100%.
Bootstrap support for A3LQV2 as seed ortholog is 100%.

Group of orthologs #473. Best score 312 bits
Score difference with first non-orthologous sequence - R.communis:182 S.stipitis:169

B9S2Y3              	100.00%		A3GFE9              	100.00%
Bootstrap support for B9S2Y3 as seed ortholog is 99%.
Bootstrap support for A3GFE9 as seed ortholog is 99%.

Group of orthologs #474. Best score 312 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:312

B9SHH9              	100.00%		A3GFP3              	100.00%
Bootstrap support for B9SHH9 as seed ortholog is 99%.
Bootstrap support for A3GFP3 as seed ortholog is 100%.

Group of orthologs #475. Best score 311 bits
Score difference with first non-orthologous sequence - R.communis:311 S.stipitis:311

B9RTM6              	100.00%		A3LUB1              	100.00%
B9SEF1              	10.14%		
Bootstrap support for B9RTM6 as seed ortholog is 100%.
Bootstrap support for A3LUB1 as seed ortholog is 100%.

Group of orthologs #476. Best score 310 bits
Score difference with first non-orthologous sequence - R.communis:310 S.stipitis:310

B9SSN6              	100.00%		A3LW98              	100.00%
B9SLG8              	74.32%		
B9RWD1              	45.41%		
B9SM11              	34.32%		
B9SQJ1              	27.84%		
B9T4Y8              	26.76%		
Bootstrap support for B9SSN6 as seed ortholog is 100%.
Bootstrap support for A3LW98 as seed ortholog is 100%.

Group of orthologs #477. Best score 310 bits
Score difference with first non-orthologous sequence - R.communis:310 S.stipitis:310

B9SLK4              	100.00%		A3LWF9              	100.00%
B9SI03              	62.87%		
Bootstrap support for B9SLK4 as seed ortholog is 100%.
Bootstrap support for A3LWF9 as seed ortholog is 100%.

Group of orthologs #478. Best score 310 bits
Score difference with first non-orthologous sequence - R.communis:310 S.stipitis:135

B9S777              	100.00%		A3GID6              	100.00%
Bootstrap support for B9S777 as seed ortholog is 100%.
Bootstrap support for A3GID6 as seed ortholog is 99%.

Group of orthologs #479. Best score 309 bits
Score difference with first non-orthologous sequence - R.communis:238 S.stipitis:309

B9TCF1              	100.00%		A3LNM1              	100.00%
                    	       		A3LXA2              	81.66%
                    	       		A3LUP5              	81.66%
                    	       		A3LWN5              	75.14%
                    	       		A3GIC0              	59.39%
Bootstrap support for B9TCF1 as seed ortholog is 99%.
Bootstrap support for A3LNM1 as seed ortholog is 100%.

Group of orthologs #480. Best score 309 bits
Score difference with first non-orthologous sequence - R.communis:309 S.stipitis:309

B9RXC8              	100.00%		A3LVH0              	100.00%
B9SYY1              	25.04%		
Bootstrap support for B9RXC8 as seed ortholog is 100%.
Bootstrap support for A3LVH0 as seed ortholog is 100%.

Group of orthologs #481. Best score 309 bits
Score difference with first non-orthologous sequence - R.communis:228 S.stipitis:251

B9SLJ3              	100.00%		A3LVD0              	100.00%
Bootstrap support for B9SLJ3 as seed ortholog is 100%.
Bootstrap support for A3LVD0 as seed ortholog is 100%.

Group of orthologs #482. Best score 309 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:309

B9STZ0              	100.00%		A3LSA9              	100.00%
Bootstrap support for B9STZ0 as seed ortholog is 99%.
Bootstrap support for A3LSA9 as seed ortholog is 100%.

Group of orthologs #483. Best score 308 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:308

B9RVM5              	100.00%		A3GHB4              	100.00%
B9T1F3              	54.07%		
Bootstrap support for B9RVM5 as seed ortholog is 99%.
Bootstrap support for A3GHB4 as seed ortholog is 100%.

Group of orthologs #484. Best score 308 bits
Score difference with first non-orthologous sequence - R.communis:233 S.stipitis:222

B9SZD3              	100.00%		A3GEX4              	100.00%
Bootstrap support for B9SZD3 as seed ortholog is 100%.
Bootstrap support for A3GEX4 as seed ortholog is 100%.

Group of orthologs #485. Best score 307 bits
Score difference with first non-orthologous sequence - R.communis:169 S.stipitis:307

B9SJK4              	100.00%		A3LN55              	100.00%
Bootstrap support for B9SJK4 as seed ortholog is 99%.
Bootstrap support for A3LN55 as seed ortholog is 100%.

Group of orthologs #486. Best score 306 bits
Score difference with first non-orthologous sequence - R.communis:306 S.stipitis:306

B9R6V0              	100.00%		A3LQE6              	100.00%
B9SX91              	69.88%		
B9S7W5              	60.10%		
B9T0Y3              	50.98%		
B9S6Y2              	49.67%		
B9S7X0              	11.47%		
Bootstrap support for B9R6V0 as seed ortholog is 100%.
Bootstrap support for A3LQE6 as seed ortholog is 100%.

Group of orthologs #487. Best score 306 bits
Score difference with first non-orthologous sequence - R.communis:306 S.stipitis:306

B9T518              	100.00%		A3LZ16              	100.00%
Bootstrap support for B9T518 as seed ortholog is 100%.
Bootstrap support for A3LZ16 as seed ortholog is 100%.

Group of orthologs #488. Best score 305 bits
Score difference with first non-orthologous sequence - R.communis:223 S.stipitis:175

B9RJ64              	100.00%		A3LR52              	100.00%
B9SF52              	66.24%		
B9SF53              	64.95%		
B9SZW3              	64.30%		
B9RWC5              	63.02%		
B9SZW2              	61.86%		
B9S4H3              	40.08%		
B9RIM5              	35.44%		
B9R8S8              	28.35%		
Bootstrap support for B9RJ64 as seed ortholog is 99%.
Bootstrap support for A3LR52 as seed ortholog is 99%.

Group of orthologs #489. Best score 305 bits
Score difference with first non-orthologous sequence - R.communis:305 S.stipitis:305

B9S5K6              	100.00%		A3LRF1              	100.00%
B9R8E7              	75.08%		
Bootstrap support for B9S5K6 as seed ortholog is 100%.
Bootstrap support for A3LRF1 as seed ortholog is 100%.

Group of orthologs #490. Best score 305 bits
Score difference with first non-orthologous sequence - R.communis:305 S.stipitis:305

B9R6R8              	100.00%		A3GF74              	100.00%
Bootstrap support for B9R6R8 as seed ortholog is 100%.
Bootstrap support for A3GF74 as seed ortholog is 100%.

Group of orthologs #491. Best score 305 bits
Score difference with first non-orthologous sequence - R.communis:227 S.stipitis:305

B9RFS3              	100.00%		A3M056              	100.00%
Bootstrap support for B9RFS3 as seed ortholog is 100%.
Bootstrap support for A3M056 as seed ortholog is 100%.

Group of orthologs #492. Best score 305 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:155

B9SJC9              	100.00%		A3LXK3              	100.00%
Bootstrap support for B9SJC9 as seed ortholog is 97%.
Bootstrap support for A3LXK3 as seed ortholog is 99%.

Group of orthologs #493. Best score 305 bits
Score difference with first non-orthologous sequence - R.communis:169 S.stipitis:305

B9SN68              	100.00%		A3LWS6              	100.00%
Bootstrap support for B9SN68 as seed ortholog is 99%.
Bootstrap support for A3LWS6 as seed ortholog is 100%.

Group of orthologs #494. Best score 304 bits
Score difference with first non-orthologous sequence - R.communis:243 S.stipitis:304

B9RJP1              	100.00%		A3LUT6              	100.00%
B9SYP5              	38.17%		
B9RJP7              	35.68%		
Bootstrap support for B9RJP1 as seed ortholog is 100%.
Bootstrap support for A3LUT6 as seed ortholog is 100%.

Group of orthologs #495. Best score 303 bits
Score difference with first non-orthologous sequence - R.communis:303 S.stipitis:303

B9T025              	100.00%		A3LVE9              	100.00%
B9T7U3              	78.38%		
Bootstrap support for B9T025 as seed ortholog is 100%.
Bootstrap support for A3LVE9 as seed ortholog is 100%.

Group of orthologs #496. Best score 302 bits
Score difference with first non-orthologous sequence - R.communis:302 S.stipitis:302

B9RVS2              	100.00%		A3LRZ6              	100.00%
Bootstrap support for B9RVS2 as seed ortholog is 100%.
Bootstrap support for A3LRZ6 as seed ortholog is 100%.

Group of orthologs #497. Best score 302 bits
Score difference with first non-orthologous sequence - R.communis:302 S.stipitis:302

B9S2X4              	100.00%		A3LVH9              	100.00%
Bootstrap support for B9S2X4 as seed ortholog is 100%.
Bootstrap support for A3LVH9 as seed ortholog is 100%.

Group of orthologs #498. Best score 302 bits
Score difference with first non-orthologous sequence - R.communis:302 S.stipitis:302

B9SP38              	100.00%		A3LSW5              	100.00%
Bootstrap support for B9SP38 as seed ortholog is 100%.
Bootstrap support for A3LSW5 as seed ortholog is 100%.

Group of orthologs #499. Best score 301 bits
Score difference with first non-orthologous sequence - R.communis:301 S.stipitis:301

B9RA93              	100.00%		A3LPU5              	100.00%
B9RA94              	96.91%		
Bootstrap support for B9RA93 as seed ortholog is 100%.
Bootstrap support for A3LPU5 as seed ortholog is 100%.

Group of orthologs #500. Best score 301 bits
Score difference with first non-orthologous sequence - R.communis:237 S.stipitis:301

B9RLY1              	100.00%		A3GH28              	100.00%
                    	       		A3LW84              	11.05%
Bootstrap support for B9RLY1 as seed ortholog is 100%.
Bootstrap support for A3GH28 as seed ortholog is 100%.

Group of orthologs #501. Best score 301 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:301

B9RDI9              	100.00%		A3LX15              	100.00%
Bootstrap support for B9RDI9 as seed ortholog is 99%.
Bootstrap support for A3LX15 as seed ortholog is 100%.

Group of orthologs #502. Best score 301 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:76

B9T2Q2              	100.00%		A3LNM7              	100.00%
Bootstrap support for B9T2Q2 as seed ortholog is 99%.
Bootstrap support for A3LNM7 as seed ortholog is 99%.

Group of orthologs #503. Best score 300 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:300

B9SP28              	100.00%		A3LRD7              	100.00%
B9SP29              	49.04%		
B9SP30              	47.64%		
B9RCL1              	33.90%		
B9RCL0              	32.50%		
B9RRD7              	29.47%		
B9S279              	9.90%		
B9S141              	9.68%		
B9RU92              	8.86%		
B9T1R3              	8.05%		
B9RH41              	6.06%		
Bootstrap support for B9SP28 as seed ortholog is 99%.
Bootstrap support for A3LRD7 as seed ortholog is 100%.

Group of orthologs #504. Best score 300 bits
Score difference with first non-orthologous sequence - R.communis:300 S.stipitis:300

B9RUZ9              	100.00%		A3GG59              	100.00%
B9RBM7              	83.27%		
Bootstrap support for B9RUZ9 as seed ortholog is 100%.
Bootstrap support for A3GG59 as seed ortholog is 100%.

Group of orthologs #505. Best score 300 bits
Score difference with first non-orthologous sequence - R.communis:300 S.stipitis:300

B9RLP1              	100.00%		A3LR32              	100.00%
Bootstrap support for B9RLP1 as seed ortholog is 100%.
Bootstrap support for A3LR32 as seed ortholog is 100%.

Group of orthologs #506. Best score 300 bits
Score difference with first non-orthologous sequence - R.communis:27 S.stipitis:73

B9S0B8              	100.00%		A3GH91              	100.00%
Bootstrap support for B9S0B8 as seed ortholog is 68%.
Alternative seed ortholog is B9S5V7 (27 bits away from this cluster)
Bootstrap support for A3GH91 as seed ortholog is 94%.

Group of orthologs #507. Best score 298 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:219

B9SQ28              	100.00%		A3GH05              	100.00%
B9T610              	48.97%		
Bootstrap support for B9SQ28 as seed ortholog is 99%.
Bootstrap support for A3GH05 as seed ortholog is 100%.

Group of orthologs #508. Best score 298 bits
Score difference with first non-orthologous sequence - R.communis:298 S.stipitis:298

B9SI04              	100.00%		A3M0I8              	100.00%
B9SLL9              	59.35%		
Bootstrap support for B9SI04 as seed ortholog is 100%.
Bootstrap support for A3M0I8 as seed ortholog is 100%.

Group of orthologs #509. Best score 298 bits
Score difference with first non-orthologous sequence - R.communis:298 S.stipitis:75

B9RJB9              	100.00%		A3LNI3              	100.00%
Bootstrap support for B9RJB9 as seed ortholog is 100%.
Bootstrap support for A3LNI3 as seed ortholog is 92%.

Group of orthologs #510. Best score 298 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:298

B9RA41              	100.00%		A3LYN5              	100.00%
Bootstrap support for B9RA41 as seed ortholog is 97%.
Bootstrap support for A3LYN5 as seed ortholog is 100%.

Group of orthologs #511. Best score 297 bits
Score difference with first non-orthologous sequence - R.communis:297 S.stipitis:297

B9RER1              	100.00%		A3LW69              	100.00%
Bootstrap support for B9RER1 as seed ortholog is 100%.
Bootstrap support for A3LW69 as seed ortholog is 100%.

Group of orthologs #512. Best score 297 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:206

B9RT69              	100.00%		A3LNI4              	100.00%
Bootstrap support for B9RT69 as seed ortholog is 100%.
Bootstrap support for A3LNI4 as seed ortholog is 100%.

Group of orthologs #513. Best score 297 bits
Score difference with first non-orthologous sequence - R.communis:297 S.stipitis:297

B9S320              	100.00%		A3LXV1              	100.00%
Bootstrap support for B9S320 as seed ortholog is 100%.
Bootstrap support for A3LXV1 as seed ortholog is 100%.

Group of orthologs #514. Best score 297 bits
Score difference with first non-orthologous sequence - R.communis:297 S.stipitis:297

B9T0A9              	100.00%		A3LRF5              	100.00%
Bootstrap support for B9T0A9 as seed ortholog is 100%.
Bootstrap support for A3LRF5 as seed ortholog is 100%.

Group of orthologs #515. Best score 296 bits
Score difference with first non-orthologous sequence - R.communis:296 S.stipitis:296

B9SCC8              	100.00%		A3GF78              	100.00%
B9SVY0              	61.17%		
Bootstrap support for B9SCC8 as seed ortholog is 100%.
Bootstrap support for A3GF78 as seed ortholog is 100%.

Group of orthologs #516. Best score 296 bits
Score difference with first non-orthologous sequence - R.communis:243 S.stipitis:296

B9T7W9              	100.00%		A3LU92              	100.00%
B9S9Y3              	39.18%		
Bootstrap support for B9T7W9 as seed ortholog is 100%.
Bootstrap support for A3LU92 as seed ortholog is 100%.

Group of orthologs #517. Best score 295 bits
Score difference with first non-orthologous sequence - R.communis:295 S.stipitis:295

B9T2W4              	100.00%		A3LZZ8              	100.00%
B9RPK9              	73.94%		
Bootstrap support for B9T2W4 as seed ortholog is 100%.
Bootstrap support for A3LZZ8 as seed ortholog is 100%.

Group of orthologs #518. Best score 295 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:295

B9RXI7              	100.00%		A3LT77              	100.00%
Bootstrap support for B9RXI7 as seed ortholog is 99%.
Bootstrap support for A3LT77 as seed ortholog is 100%.

Group of orthologs #519. Best score 294 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:98

B9SQG6              	100.00%		A3GG58              	100.00%
B9SG58              	69.81%		
B9S0X2              	38.09%		
B9S0X0              	22.29%		
B9SP34              	14.15%		
Bootstrap support for B9SQG6 as seed ortholog is 97%.
Bootstrap support for A3GG58 as seed ortholog is 99%.

Group of orthologs #520. Best score 294 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:183

B9RS69              	100.00%		A3GI29              	100.00%
B9RAS6              	45.25%		
B9SVN5              	43.73%		
B9T436              	30.61%		
Bootstrap support for B9RS69 as seed ortholog is 100%.
Bootstrap support for A3GI29 as seed ortholog is 99%.

Group of orthologs #521. Best score 294 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:294

B9RB79              	100.00%		A3LRR5              	100.00%
B9RTF7              	13.98%		
Bootstrap support for B9RB79 as seed ortholog is 98%.
Bootstrap support for A3LRR5 as seed ortholog is 100%.

Group of orthologs #522. Best score 294 bits
Score difference with first non-orthologous sequence - R.communis:294 S.stipitis:294

B9RDN6              	100.00%		A3LR94              	100.00%
Bootstrap support for B9RDN6 as seed ortholog is 100%.
Bootstrap support for A3LR94 as seed ortholog is 100%.

Group of orthologs #523. Best score 294 bits
Score difference with first non-orthologous sequence - R.communis:294 S.stipitis:294

B9RZ74              	100.00%		A3LQP8              	100.00%
Bootstrap support for B9RZ74 as seed ortholog is 100%.
Bootstrap support for A3LQP8 as seed ortholog is 100%.

Group of orthologs #524. Best score 294 bits
Score difference with first non-orthologous sequence - R.communis:294 S.stipitis:294

B9RZW1              	100.00%		A3LSX3              	100.00%
Bootstrap support for B9RZW1 as seed ortholog is 100%.
Bootstrap support for A3LSX3 as seed ortholog is 100%.

Group of orthologs #525. Best score 293 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:293

B9SUC4              	100.00%		A3LY85              	100.00%
B9S6M1              	76.63%		A3GFU2              	34.58%
B9SCI8              	50.86%		A3LU84              	26.95%
Bootstrap support for B9SUC4 as seed ortholog is 96%.
Bootstrap support for A3LY85 as seed ortholog is 100%.

Group of orthologs #526. Best score 293 bits
Score difference with first non-orthologous sequence - R.communis:293 S.stipitis:92

B9RJA1              	100.00%		A3LPR5              	100.00%
B9RMS3              	48.42%		
B9SUW8              	32.43%		
Bootstrap support for B9RJA1 as seed ortholog is 100%.
Bootstrap support for A3LPR5 as seed ortholog is 97%.

Group of orthologs #527. Best score 293 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:91

B9SKI8              	100.00%		A3LWN8              	100.00%
B9T851              	29.17%		
Bootstrap support for B9SKI8 as seed ortholog is 99%.
Bootstrap support for A3LWN8 as seed ortholog is 97%.

Group of orthologs #528. Best score 292 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:88

B9R9Z5              	100.00%		A3LRF3              	100.00%
B9T0L1              	94.78%		
B9RQ67              	41.74%		
B9SKB1              	33.04%		
Bootstrap support for B9R9Z5 as seed ortholog is 99%.
Bootstrap support for A3LRF3 as seed ortholog is 99%.

Group of orthologs #529. Best score 292 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:292

B9SQK5              	100.00%		A3LRC9              	100.00%
B9SQK4              	46.44%		
B9SQJ8              	35.62%		
B9SQK6              	21.64%		
Bootstrap support for B9SQK5 as seed ortholog is 100%.
Bootstrap support for A3LRC9 as seed ortholog is 100%.

Group of orthologs #530. Best score 292 bits
Score difference with first non-orthologous sequence - R.communis:203 S.stipitis:292

B9SPJ9              	100.00%		A3LPT6              	100.00%
Bootstrap support for B9SPJ9 as seed ortholog is 100%.
Bootstrap support for A3LPT6 as seed ortholog is 100%.

Group of orthologs #531. Best score 291 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:137

B9RRX5              	100.00%		A3LT96              	100.00%
B9RDF3              	15.03%		
Bootstrap support for B9RRX5 as seed ortholog is 99%.
Bootstrap support for A3LT96 as seed ortholog is 99%.

Group of orthologs #532. Best score 290 bits
Score difference with first non-orthologous sequence - R.communis:58 S.stipitis:44

B9RVM0              	100.00%		A3LUH2              	100.00%
B9SNS9              	80.30%		
B9T4R4              	16.46%		
B9T5N4              	8.60%		
B9REV9              	8.35%		
B9RLU5              	6.86%		
Bootstrap support for B9RVM0 as seed ortholog is 95%.
Bootstrap support for A3LUH2 as seed ortholog is 88%.

Group of orthologs #533. Best score 290 bits
Score difference with first non-orthologous sequence - R.communis:290 S.stipitis:6

B9S8U7              	100.00%		A3LP00              	100.00%
B9S106              	17.96%		
B9RT30              	12.42%		
Bootstrap support for B9S8U7 as seed ortholog is 100%.
Bootstrap support for A3LP00 as seed ortholog is 57%.
Alternative seed ortholog is A3GH14 (6 bits away from this cluster)

Group of orthologs #534. Best score 290 bits
Score difference with first non-orthologous sequence - R.communis:290 S.stipitis:290

B9SIW8              	100.00%		A3GHF0              	100.00%
                    	       		A3GFN9              	81.86%
Bootstrap support for B9SIW8 as seed ortholog is 100%.
Bootstrap support for A3GHF0 as seed ortholog is 100%.

Group of orthologs #535. Best score 290 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:177

B9S1G6              	100.00%		A3LVW0              	100.00%
Bootstrap support for B9S1G6 as seed ortholog is 99%.
Bootstrap support for A3LVW0 as seed ortholog is 99%.

Group of orthologs #536. Best score 290 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:290

B9SDT0              	100.00%		A3LR21              	100.00%
Bootstrap support for B9SDT0 as seed ortholog is 99%.
Bootstrap support for A3LR21 as seed ortholog is 100%.

Group of orthologs #537. Best score 290 bits
Score difference with first non-orthologous sequence - R.communis:290 S.stipitis:290

B9T3X8              	100.00%		A3LP99              	100.00%
Bootstrap support for B9T3X8 as seed ortholog is 100%.
Bootstrap support for A3LP99 as seed ortholog is 100%.

Group of orthologs #538. Best score 289 bits
Score difference with first non-orthologous sequence - R.communis:289 S.stipitis:289

B9R8L9              	100.00%		A3LSG3              	100.00%
Bootstrap support for B9R8L9 as seed ortholog is 100%.
Bootstrap support for A3LSG3 as seed ortholog is 100%.

Group of orthologs #539. Best score 289 bits
Score difference with first non-orthologous sequence - R.communis:289 S.stipitis:289

B9S614              	100.00%		A3GF09              	100.00%
Bootstrap support for B9S614 as seed ortholog is 100%.
Bootstrap support for A3GF09 as seed ortholog is 100%.

Group of orthologs #540. Best score 289 bits
Score difference with first non-orthologous sequence - R.communis:289 S.stipitis:289

B9S0U2              	100.00%		A3LTY5              	100.00%
Bootstrap support for B9S0U2 as seed ortholog is 100%.
Bootstrap support for A3LTY5 as seed ortholog is 100%.

Group of orthologs #541. Best score 288 bits
Score difference with first non-orthologous sequence - R.communis:210 S.stipitis:288

B9RXH6              	100.00%		A3LYI5              	100.00%
B9SVA7              	70.56%		
B9SFR8              	47.85%		
B9RFR2              	44.49%		
B9S023              	37.50%		
Bootstrap support for B9RXH6 as seed ortholog is 100%.
Bootstrap support for A3LYI5 as seed ortholog is 100%.

Group of orthologs #542. Best score 288 bits
Score difference with first non-orthologous sequence - R.communis:288 S.stipitis:288

B9SD61              	100.00%		A3LRX6              	100.00%
                    	       		A3LQI7              	39.86%
Bootstrap support for B9SD61 as seed ortholog is 100%.
Bootstrap support for A3LRX6 as seed ortholog is 100%.

Group of orthologs #543. Best score 288 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:288

B9SLT7              	100.00%		A3LU81              	100.00%
                    	       		A3LYI9              	33.20%
Bootstrap support for B9SLT7 as seed ortholog is 100%.
Bootstrap support for A3LU81 as seed ortholog is 100%.

Group of orthologs #544. Best score 288 bits
Score difference with first non-orthologous sequence - R.communis:288 S.stipitis:288

B9SAS6              	100.00%		A3LS44              	100.00%
Bootstrap support for B9SAS6 as seed ortholog is 100%.
Bootstrap support for A3LS44 as seed ortholog is 100%.

Group of orthologs #545. Best score 288 bits
Score difference with first non-orthologous sequence - R.communis:288 S.stipitis:288

B9SXA6              	100.00%		A3LUY5              	100.00%
Bootstrap support for B9SXA6 as seed ortholog is 100%.
Bootstrap support for A3LUY5 as seed ortholog is 100%.

Group of orthologs #546. Best score 287 bits
Score difference with first non-orthologous sequence - R.communis:12 S.stipitis:89

B9SMJ1              	100.00%		A3LU04              	100.00%
B9SWQ3              	31.60%		
B9RCZ5              	30.46%		
B9RUJ4              	28.77%		
B9S652              	27.41%		
B9S9W6              	24.58%		
B9SSV4              	22.20%		
B9SEN4              	12.34%		
B9T6K2              	10.76%		
B9SSV3              	10.65%		
B9SKT6              	6.80%		
Bootstrap support for B9SMJ1 as seed ortholog is 53%.
Alternative seed ortholog is B9T6Y2 (12 bits away from this cluster)
Bootstrap support for A3LU04 as seed ortholog is 98%.

Group of orthologs #547. Best score 287 bits
Score difference with first non-orthologous sequence - R.communis:287 S.stipitis:287

B9RH95              	100.00%		A3LQH3              	100.00%
Bootstrap support for B9RH95 as seed ortholog is 100%.
Bootstrap support for A3LQH3 as seed ortholog is 100%.

Group of orthologs #548. Best score 287 bits
Score difference with first non-orthologous sequence - R.communis:287 S.stipitis:287

B9SED8              	100.00%		A3LR93              	100.00%
Bootstrap support for B9SED8 as seed ortholog is 100%.
Bootstrap support for A3LR93 as seed ortholog is 100%.

Group of orthologs #549. Best score 287 bits
Score difference with first non-orthologous sequence - R.communis:287 S.stipitis:287

B9T3S8              	100.00%		A3LZR6              	100.00%
Bootstrap support for B9T3S8 as seed ortholog is 100%.
Bootstrap support for A3LZR6 as seed ortholog is 100%.

Group of orthologs #550. Best score 286 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:286

B9RYS8              	100.00%		A3LR59              	100.00%
Bootstrap support for B9RYS8 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #551. Best score 286 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:179

B9SMV1              	100.00%		A3LTB4              	100.00%
Bootstrap support for B9SMV1 as seed ortholog is 95%.
Bootstrap support for A3LTB4 as seed ortholog is 99%.

Group of orthologs #552. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:14 S.stipitis:285

B9T6P5              	100.00%		A3LY04              	100.00%
B9S1S7              	45.60%		
B9SEG2              	43.32%		
B9SDN1              	28.19%		
B9T8C4              	28.08%		
B9S9X8              	21.24%		
B9SJG8              	19.90%		
Bootstrap support for B9T6P5 as seed ortholog is 56%.
Alternative seed ortholog is B9SMJ8 (14 bits away from this cluster)
Bootstrap support for A3LY04 as seed ortholog is 100%.

Group of orthologs #553. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:285 S.stipitis:285

B9SEZ0              	100.00%		A3LQE5              	100.00%
B9T661              	26.27%		
B9SQ31              	13.22%		
B9SI20              	12.37%		
Bootstrap support for B9SEZ0 as seed ortholog is 100%.
Bootstrap support for A3LQE5 as seed ortholog is 100%.

Group of orthologs #554. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:285

A0T1K2              	100.00%		A3LUV0              	100.00%
B9SQ58              	100.00%		A3GHU0              	100.00%
Bootstrap support for A0T1K2 as seed ortholog is 98%.
Bootstrap support for B9SQ58 as seed ortholog is 98%.
Bootstrap support for A3LUV0 as seed ortholog is 100%.
Bootstrap support for A3GHU0 as seed ortholog is 100%.

Group of orthologs #555. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:285 S.stipitis:285

B9RDF4              	100.00%		A3GH07              	100.00%
Bootstrap support for B9RDF4 as seed ortholog is 100%.
Bootstrap support for A3GH07 as seed ortholog is 100%.

Group of orthologs #556. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:285 S.stipitis:285

B9RY76              	100.00%		A3GH67              	100.00%
Bootstrap support for B9RY76 as seed ortholog is 100%.
Bootstrap support for A3GH67 as seed ortholog is 100%.

Group of orthologs #557. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:285 S.stipitis:285

B9S3J3              	100.00%		A3LWP4              	100.00%
Bootstrap support for B9S3J3 as seed ortholog is 100%.
Bootstrap support for A3LWP4 as seed ortholog is 100%.

Group of orthologs #558. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:285 S.stipitis:285

B9SSI2              	100.00%		A3LMT5              	100.00%
Bootstrap support for B9SSI2 as seed ortholog is 100%.
Bootstrap support for A3LMT5 as seed ortholog is 100%.

Group of orthologs #559. Best score 285 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:96

B9SSE0              	100.00%		A3LPX3              	100.00%
Bootstrap support for B9SSE0 as seed ortholog is 98%.
Bootstrap support for A3LPX3 as seed ortholog is 97%.

Group of orthologs #560. Best score 284 bits
Score difference with first non-orthologous sequence - R.communis:284 S.stipitis:284

B9S5T1              	100.00%		A3LX86              	100.00%
B9RK28              	68.13%		
B9SN64              	43.87%		
Bootstrap support for B9S5T1 as seed ortholog is 100%.
Bootstrap support for A3LX86 as seed ortholog is 100%.

Group of orthologs #561. Best score 284 bits
Score difference with first non-orthologous sequence - R.communis:284 S.stipitis:284

G1D7B4              	100.00%		A3LY35              	100.00%
B9SDT3              	71.70%		
Bootstrap support for G1D7B4 as seed ortholog is 100%.
Bootstrap support for A3LY35 as seed ortholog is 100%.

Group of orthologs #562. Best score 284 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:182

B9SZ50              	100.00%		A3LMS4              	100.00%
Bootstrap support for B9SZ50 as seed ortholog is 99%.
Bootstrap support for A3LMS4 as seed ortholog is 99%.

Group of orthologs #563. Best score 282 bits
Score difference with first non-orthologous sequence - R.communis:282 S.stipitis:282

B9R7E7              	100.00%		A3LN62              	100.00%
B9R7E6              	47.17%		
Bootstrap support for B9R7E7 as seed ortholog is 100%.
Bootstrap support for A3LN62 as seed ortholog is 100%.

Group of orthologs #564. Best score 282 bits
Score difference with first non-orthologous sequence - R.communis:282 S.stipitis:282

B9SLX4              	100.00%		A3LU31              	100.00%
B9SZQ6              	17.26%		
Bootstrap support for B9SLX4 as seed ortholog is 100%.
Bootstrap support for A3LU31 as seed ortholog is 100%.

Group of orthologs #565. Best score 282 bits
Score difference with first non-orthologous sequence - R.communis:227 S.stipitis:208

B9T4F8              	100.00%		A3LQR9              	100.00%
B9SYJ9              	66.14%		
Bootstrap support for B9T4F8 as seed ortholog is 99%.
Bootstrap support for A3LQR9 as seed ortholog is 99%.

Group of orthologs #566. Best score 282 bits
Score difference with first non-orthologous sequence - R.communis:226 S.stipitis:282

B9R8M8              	100.00%		A3LQH4              	100.00%
Bootstrap support for B9R8M8 as seed ortholog is 100%.
Bootstrap support for A3LQH4 as seed ortholog is 100%.

Group of orthologs #567. Best score 282 bits
Score difference with first non-orthologous sequence - R.communis:206 S.stipitis:282

B9SLA6              	100.00%		A3LPT0              	100.00%
Bootstrap support for B9SLA6 as seed ortholog is 100%.
Bootstrap support for A3LPT0 as seed ortholog is 100%.

Group of orthologs #568. Best score 281 bits
Score difference with first non-orthologous sequence - R.communis:28 S.stipitis:281

B9SH72              	100.00%		A3GH98              	100.00%
                    	       		A3GH96              	42.84%
Bootstrap support for B9SH72 as seed ortholog is 66%.
Alternative seed ortholog is B9SGN6 (28 bits away from this cluster)
Bootstrap support for A3GH98 as seed ortholog is 100%.

Group of orthologs #569. Best score 281 bits
Score difference with first non-orthologous sequence - R.communis:281 S.stipitis:281

B9RQ40              	100.00%		A3LQN6              	100.00%
Bootstrap support for B9RQ40 as seed ortholog is 100%.
Bootstrap support for A3LQN6 as seed ortholog is 100%.

Group of orthologs #570. Best score 281 bits
Score difference with first non-orthologous sequence - R.communis:281 S.stipitis:281

B9SH97              	100.00%		A3LRL5              	100.00%
Bootstrap support for B9SH97 as seed ortholog is 100%.
Bootstrap support for A3LRL5 as seed ortholog is 100%.

Group of orthologs #571. Best score 280 bits
Score difference with first non-orthologous sequence - R.communis:280 S.stipitis:280

B9RGT2              	100.00%		A3LUW1              	100.00%
Bootstrap support for B9RGT2 as seed ortholog is 100%.
Bootstrap support for A3LUW1 as seed ortholog is 100%.

Group of orthologs #572. Best score 280 bits
Score difference with first non-orthologous sequence - R.communis:280 S.stipitis:280

B9RQ30              	100.00%		A3LSB1              	100.00%
Bootstrap support for B9RQ30 as seed ortholog is 100%.
Bootstrap support for A3LSB1 as seed ortholog is 100%.

Group of orthologs #573. Best score 279 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:279

B9S0Y9              	100.00%		A3GI48              	100.00%
B9ST75              	37.05%		A3GF29              	28.29%
B9ST69              	36.14%		
B9ST74              	32.50%		
Bootstrap support for B9S0Y9 as seed ortholog is 100%.
Bootstrap support for A3GI48 as seed ortholog is 100%.

Group of orthologs #574. Best score 279 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:279

B9S4S9              	100.00%		A3LR48              	100.00%
B9RWJ9              	27.02%		A3GI90              	13.30%
Bootstrap support for B9S4S9 as seed ortholog is 99%.
Bootstrap support for A3LR48 as seed ortholog is 100%.

Group of orthologs #575. Best score 279 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:279

B9RUM8              	100.00%		A3LUL0              	100.00%
Bootstrap support for B9RUM8 as seed ortholog is 100%.
Bootstrap support for A3LUL0 as seed ortholog is 100%.

Group of orthologs #576. Best score 279 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:160

B9S6A4              	100.00%		A3GH90              	100.00%
Bootstrap support for B9S6A4 as seed ortholog is 100%.
Bootstrap support for A3GH90 as seed ortholog is 99%.

Group of orthologs #577. Best score 279 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:279

B9RWA7              	100.00%		A3LYW1              	100.00%
Bootstrap support for B9RWA7 as seed ortholog is 100%.
Bootstrap support for A3LYW1 as seed ortholog is 100%.

Group of orthologs #578. Best score 279 bits
Score difference with first non-orthologous sequence - R.communis:279 S.stipitis:279

B9S6T4              	100.00%		A3LW21              	100.00%
Bootstrap support for B9S6T4 as seed ortholog is 100%.
Bootstrap support for A3LW21 as seed ortholog is 100%.

Group of orthologs #579. Best score 278 bits
Score difference with first non-orthologous sequence - R.communis:278 S.stipitis:278

B9RMS4              	100.00%		A3LP90              	100.00%
Bootstrap support for B9RMS4 as seed ortholog is 100%.
Bootstrap support for A3LP90 as seed ortholog is 100%.

Group of orthologs #580. Best score 278 bits
Score difference with first non-orthologous sequence - R.communis:278 S.stipitis:278

B9S7L7              	100.00%		A3LRQ5              	100.00%
Bootstrap support for B9S7L7 as seed ortholog is 100%.
Bootstrap support for A3LRQ5 as seed ortholog is 100%.

Group of orthologs #581. Best score 278 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:278

B9SWD3              	100.00%		A3LYP7              	100.00%
Bootstrap support for B9SWD3 as seed ortholog is 99%.
Bootstrap support for A3LYP7 as seed ortholog is 100%.

Group of orthologs #582. Best score 278 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:126

B9SWT3              	100.00%		O94114              	100.00%
Bootstrap support for B9SWT3 as seed ortholog is 99%.
Bootstrap support for O94114 as seed ortholog is 99%.

Group of orthologs #583. Best score 277 bits
Score difference with first non-orthologous sequence - R.communis:277 S.stipitis:277

B9SI66              	100.00%		A3LMS2              	100.00%
Bootstrap support for B9SI66 as seed ortholog is 100%.
Bootstrap support for A3LMS2 as seed ortholog is 100%.

Group of orthologs #584. Best score 276 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:58

B9SK95              	100.00%		A3LRG9              	100.00%
B9SKA1              	38.58%		
B9RRB8              	21.12%		
B9SES7              	15.95%		
B9SKA2              	15.52%		
Bootstrap support for B9SK95 as seed ortholog is 99%.
Bootstrap support for A3LRG9 as seed ortholog is 92%.

Group of orthologs #585. Best score 276 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:192

B9SP08              	100.00%		A3GI66              	100.00%
Bootstrap support for B9SP08 as seed ortholog is 99%.
Bootstrap support for A3GI66 as seed ortholog is 99%.

Group of orthologs #586. Best score 275 bits
Score difference with first non-orthologous sequence - R.communis:42 S.stipitis:275

B9TBT5              	100.00%		A3LQQ3              	100.00%
B9TII2              	16.08%		A3GFD1              	69.85%
                    	       		A3GFE6              	67.18%
                    	       		A3LVI7              	43.48%
                    	       		A3LYK4              	34.64%
                    	       		A3LUN5              	34.57%
Bootstrap support for B9TBT5 as seed ortholog is 75%.
Bootstrap support for A3LQQ3 as seed ortholog is 100%.

Group of orthologs #587. Best score 275 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:72

B9RYP0              	100.00%		A3LUB9              	100.00%
Bootstrap support for B9RYP0 as seed ortholog is 95%.
Bootstrap support for A3LUB9 as seed ortholog is 95%.

Group of orthologs #588. Best score 275 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:275

B9SDW7              	100.00%		A3LX01              	100.00%
Bootstrap support for B9SDW7 as seed ortholog is 99%.
Bootstrap support for A3LX01 as seed ortholog is 100%.

Group of orthologs #589. Best score 275 bits
Score difference with first non-orthologous sequence - R.communis:275 S.stipitis:275

B9SI01              	100.00%		A3LTA0              	100.00%
Bootstrap support for B9SI01 as seed ortholog is 100%.
Bootstrap support for A3LTA0 as seed ortholog is 100%.

Group of orthologs #590. Best score 275 bits
Score difference with first non-orthologous sequence - R.communis:275 S.stipitis:275

B9SKR2              	100.00%		A3LVB0              	100.00%
Bootstrap support for B9SKR2 as seed ortholog is 100%.
Bootstrap support for A3LVB0 as seed ortholog is 100%.

Group of orthologs #591. Best score 274 bits
Score difference with first non-orthologous sequence - R.communis:274 S.stipitis:274

B9RAM4              	100.00%		A3LYA3              	100.00%
Bootstrap support for B9RAM4 as seed ortholog is 100%.
Bootstrap support for A3LYA3 as seed ortholog is 100%.

Group of orthologs #592. Best score 274 bits
Score difference with first non-orthologous sequence - R.communis:274 S.stipitis:274

B9RKE3              	100.00%		A3LX55              	100.00%
Bootstrap support for B9RKE3 as seed ortholog is 100%.
Bootstrap support for A3LX55 as seed ortholog is 100%.

Group of orthologs #593. Best score 273 bits
Score difference with first non-orthologous sequence - R.communis:273 S.stipitis:202

B9RHL3              	100.00%		A3LNN8              	100.00%
Bootstrap support for B9RHL3 as seed ortholog is 100%.
Bootstrap support for A3LNN8 as seed ortholog is 99%.

Group of orthologs #594. Best score 273 bits
Score difference with first non-orthologous sequence - R.communis:13 S.stipitis:273

B9RF54              	100.00%		A3LX87              	100.00%
Bootstrap support for B9RF54 as seed ortholog is 57%.
Alternative seed ortholog is B9S433 (13 bits away from this cluster)
Bootstrap support for A3LX87 as seed ortholog is 100%.

Group of orthologs #595. Best score 273 bits
Score difference with first non-orthologous sequence - R.communis:273 S.stipitis:273

B9RGD5              	100.00%		A3LXW4              	100.00%
Bootstrap support for B9RGD5 as seed ortholog is 100%.
Bootstrap support for A3LXW4 as seed ortholog is 100%.

Group of orthologs #596. Best score 273 bits
Score difference with first non-orthologous sequence - R.communis:273 S.stipitis:273

B9RKJ5              	100.00%		A3M0F8              	100.00%
Bootstrap support for B9RKJ5 as seed ortholog is 100%.
Bootstrap support for A3M0F8 as seed ortholog is 100%.

Group of orthologs #597. Best score 273 bits
Score difference with first non-orthologous sequence - R.communis:273 S.stipitis:273

B9SKC6              	100.00%		A3LNS3              	100.00%
Bootstrap support for B9SKC6 as seed ortholog is 100%.
Bootstrap support for A3LNS3 as seed ortholog is 100%.

Group of orthologs #598. Best score 272 bits
Score difference with first non-orthologous sequence - R.communis:272 S.stipitis:272

B9RBP6              	100.00%		A3LZA2              	100.00%
Bootstrap support for B9RBP6 as seed ortholog is 100%.
Bootstrap support for A3LZA2 as seed ortholog is 100%.

Group of orthologs #599. Best score 272 bits
Score difference with first non-orthologous sequence - R.communis:272 S.stipitis:272

B9RZC7              	100.00%		A3LYT2              	100.00%
Bootstrap support for B9RZC7 as seed ortholog is 100%.
Bootstrap support for A3LYT2 as seed ortholog is 100%.

Group of orthologs #600. Best score 271 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:97

B9S976              	100.00%		A3GF21              	100.00%
B9SWY1              	76.89%		A3GGL8              	62.09%
B9RLM7              	55.72%		
B9RLM6              	44.49%		
Bootstrap support for B9S976 as seed ortholog is 99%.
Bootstrap support for A3GF21 as seed ortholog is 98%.

Group of orthologs #601. Best score 271 bits
Score difference with first non-orthologous sequence - R.communis:271 S.stipitis:271

B9RHC3              	100.00%		A3LTQ5              	100.00%
Bootstrap support for B9RHC3 as seed ortholog is 100%.
Bootstrap support for A3LTQ5 as seed ortholog is 100%.

Group of orthologs #602. Best score 271 bits
Score difference with first non-orthologous sequence - R.communis:178 S.stipitis:140

B9RQG1              	100.00%		A3LNW3              	100.00%
Bootstrap support for B9RQG1 as seed ortholog is 100%.
Bootstrap support for A3LNW3 as seed ortholog is 99%.

Group of orthologs #603. Best score 271 bits
Score difference with first non-orthologous sequence - R.communis:271 S.stipitis:271

B9T256              	100.00%		A3GGK7              	100.00%
Bootstrap support for B9T256 as seed ortholog is 100%.
Bootstrap support for A3GGK7 as seed ortholog is 100%.

Group of orthologs #604. Best score 270 bits
Score difference with first non-orthologous sequence - R.communis:270 S.stipitis:188

B9RQD9              	100.00%		A3M060              	100.00%
B9RKH7              	67.47%		
B9R883              	36.36%		
B9RIG9              	34.80%		
B9SSE4              	25.99%		
Bootstrap support for B9RQD9 as seed ortholog is 100%.
Bootstrap support for A3M060 as seed ortholog is 99%.

Group of orthologs #605. Best score 270 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:270

B9S7C0              	100.00%		A3LX18              	100.00%
Bootstrap support for B9S7C0 as seed ortholog is 99%.
Bootstrap support for A3LX18 as seed ortholog is 100%.

Group of orthologs #606. Best score 270 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:161

B9S7X4              	100.00%		A3LXG1              	100.00%
Bootstrap support for B9S7X4 as seed ortholog is 99%.
Bootstrap support for A3LXG1 as seed ortholog is 99%.

Group of orthologs #607. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:269 S.stipitis:269

B9S1S3              	100.00%		A3LW61              	100.00%
B9SS54              	22.93%		A3LYX9              	53.39%
B9SV13              	22.59%		
Bootstrap support for B9S1S3 as seed ortholog is 100%.
Bootstrap support for A3LW61 as seed ortholog is 100%.

Group of orthologs #608. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:8 S.stipitis:269

B9SS38              	100.00%		A3LPQ3              	100.00%
B9RZY0              	18.51%		
B9RRL2              	7.04%		
Bootstrap support for B9SS38 as seed ortholog is 62%.
Alternative seed ortholog is B9RJX4 (8 bits away from this cluster)
Bootstrap support for A3LPQ3 as seed ortholog is 100%.

Group of orthologs #609. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:269 S.stipitis:190

B9S6U1              	100.00%		A3LPJ7              	100.00%
B9T1J1              	25.17%		
Bootstrap support for B9S6U1 as seed ortholog is 100%.
Bootstrap support for A3LPJ7 as seed ortholog is 99%.

Group of orthologs #610. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:269 S.stipitis:87

B9SDP7              	100.00%		A3M0M1              	100.00%
B9RKG5              	20.62%		
Bootstrap support for B9SDP7 as seed ortholog is 100%.
Bootstrap support for A3M0M1 as seed ortholog is 93%.

Group of orthologs #611. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:269 S.stipitis:269

B9RF11              	100.00%		A3LSH4              	100.00%
Bootstrap support for B9RF11 as seed ortholog is 100%.
Bootstrap support for A3LSH4 as seed ortholog is 100%.

Group of orthologs #612. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:269

B9RUF4              	100.00%		A3LP78              	100.00%
Bootstrap support for B9RUF4 as seed ortholog is 98%.
Bootstrap support for A3LP78 as seed ortholog is 100%.

Group of orthologs #613. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:269 S.stipitis:269

B9SEY8              	100.00%		A3GEZ2              	100.00%
Bootstrap support for B9SEY8 as seed ortholog is 100%.
Bootstrap support for A3GEZ2 as seed ortholog is 100%.

Group of orthologs #614. Best score 269 bits
Score difference with first non-orthologous sequence - R.communis:269 S.stipitis:269

B9SXV7              	100.00%		A3M057              	100.00%
Bootstrap support for B9SXV7 as seed ortholog is 100%.
Bootstrap support for A3M057 as seed ortholog is 100%.

Group of orthologs #615. Best score 268 bits
Score difference with first non-orthologous sequence - R.communis:211 S.stipitis:125

B9SCY8              	100.00%		A3LXL4              	100.00%
B9SCY5              	71.91%		
B9SCY6              	68.76%		
B9SCY7              	66.52%		
B9SWZ9              	16.18%		
Bootstrap support for B9SCY8 as seed ortholog is 100%.
Bootstrap support for A3LXL4 as seed ortholog is 99%.

Group of orthologs #616. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:267 S.stipitis:267

B9RJN4              	100.00%		A3GGD3              	100.00%
B9T0A0              	93.72%		
B9SIL2              	45.74%		
Bootstrap support for B9RJN4 as seed ortholog is 100%.
Bootstrap support for A3GGD3 as seed ortholog is 100%.

Group of orthologs #617. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:267 S.stipitis:267

B9RR89              	100.00%		A3LP40              	100.00%
B9T3A4              	87.73%		
Bootstrap support for B9RR89 as seed ortholog is 100%.
Bootstrap support for A3LP40 as seed ortholog is 100%.

Group of orthologs #618. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:267 S.stipitis:267

B9RR58              	100.00%		A3LWG2              	100.00%
Bootstrap support for B9RR58 as seed ortholog is 100%.
Bootstrap support for A3LWG2 as seed ortholog is 100%.

Group of orthologs #619. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:103 S.stipitis:267

B9RPK6              	100.00%		A3M0D7              	100.00%
Bootstrap support for B9RPK6 as seed ortholog is 99%.
Bootstrap support for A3M0D7 as seed ortholog is 100%.

Group of orthologs #620. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:267 S.stipitis:267

B9SCD6              	100.00%		A3LS15              	100.00%
Bootstrap support for B9SCD6 as seed ortholog is 100%.
Bootstrap support for A3LS15 as seed ortholog is 100%.

Group of orthologs #621. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:267 S.stipitis:267

B9STZ8              	100.00%		A3LQF9              	100.00%
Bootstrap support for B9STZ8 as seed ortholog is 100%.
Bootstrap support for A3LQF9 as seed ortholog is 100%.

Group of orthologs #622. Best score 267 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:267

B9SYB5              	100.00%		A3LMT4              	100.00%
Bootstrap support for B9SYB5 as seed ortholog is 99%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #623. Best score 266 bits
Score difference with first non-orthologous sequence - R.communis:266 S.stipitis:266

B9RK17              	100.00%		A3LP59              	100.00%
B9RQV4              	79.37%		
Bootstrap support for B9RK17 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #624. Best score 266 bits
Score difference with first non-orthologous sequence - R.communis:266 S.stipitis:266

B9R9Y1              	100.00%		A3GGS6              	100.00%
Bootstrap support for B9R9Y1 as seed ortholog is 100%.
Bootstrap support for A3GGS6 as seed ortholog is 100%.

Group of orthologs #625. Best score 266 bits
Score difference with first non-orthologous sequence - R.communis:266 S.stipitis:266

B9SUA1              	100.00%		A3GF56              	100.00%
Bootstrap support for B9SUA1 as seed ortholog is 100%.
Bootstrap support for A3GF56 as seed ortholog is 100%.

Group of orthologs #626. Best score 265 bits
Score difference with first non-orthologous sequence - R.communis:265 S.stipitis:265

B9RFU5              	100.00%		A3LQV5              	100.00%
Bootstrap support for B9RFU5 as seed ortholog is 100%.
Bootstrap support for A3LQV5 as seed ortholog is 100%.

Group of orthologs #627. Best score 265 bits
Score difference with first non-orthologous sequence - R.communis:265 S.stipitis:80

B9RL84              	100.00%		A3LYR6              	100.00%
Bootstrap support for B9RL84 as seed ortholog is 100%.
Bootstrap support for A3LYR6 as seed ortholog is 96%.

Group of orthologs #628. Best score 265 bits
Score difference with first non-orthologous sequence - R.communis:265 S.stipitis:265

B9SA46              	100.00%		A3LWN0              	100.00%
Bootstrap support for B9SA46 as seed ortholog is 100%.
Bootstrap support for A3LWN0 as seed ortholog is 100%.

Group of orthologs #629. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:264

B9S908              	100.00%		A3GGR4              	100.00%
B9S909              	72.15%		
B9SVI3              	43.60%		
B9SS53              	17.52%		
B9RL98              	14.58%		
Bootstrap support for B9S908 as seed ortholog is 100%.
Bootstrap support for A3GGR4 as seed ortholog is 100%.

Group of orthologs #630. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:264

B9STC9              	100.00%		A3LZL0              	100.00%
B9T4H8              	13.97%		
Bootstrap support for B9STC9 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #631. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:264

B9RMC0              	100.00%		A3GF16              	100.00%
Bootstrap support for B9RMC0 as seed ortholog is 100%.
Bootstrap support for A3GF16 as seed ortholog is 100%.

Group of orthologs #632. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:209 S.stipitis:108

B9S4U4              	100.00%		A3LMT1              	100.00%
Bootstrap support for B9S4U4 as seed ortholog is 100%.
Bootstrap support for A3LMT1 as seed ortholog is 99%.

Group of orthologs #633. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:135

B9S001              	100.00%		A3LY99              	100.00%
Bootstrap support for B9S001 as seed ortholog is 100%.
Bootstrap support for A3LY99 as seed ortholog is 99%.

Group of orthologs #634. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:264

B9S1A4              	100.00%		A3LY74              	100.00%
Bootstrap support for B9S1A4 as seed ortholog is 100%.
Bootstrap support for A3LY74 as seed ortholog is 100%.

Group of orthologs #635. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:264

B9S9F7              	100.00%		A3LWY0              	100.00%
Bootstrap support for B9S9F7 as seed ortholog is 100%.
Bootstrap support for A3LWY0 as seed ortholog is 100%.

Group of orthologs #636. Best score 264 bits
Score difference with first non-orthologous sequence - R.communis:264 S.stipitis:264

B9SPP1              	100.00%		A3LTL4              	100.00%
Bootstrap support for B9SPP1 as seed ortholog is 100%.
Bootstrap support for A3LTL4 as seed ortholog is 100%.

Group of orthologs #637. Best score 263 bits
Score difference with first non-orthologous sequence - R.communis:263 S.stipitis:263

B9SN36              	100.00%		A3LWM9              	100.00%
B9RQ05              	61.67%		
Bootstrap support for B9SN36 as seed ortholog is 100%.
Bootstrap support for A3LWM9 as seed ortholog is 100%.

Group of orthologs #638. Best score 263 bits
Score difference with first non-orthologous sequence - R.communis:263 S.stipitis:263

B9RFS4              	100.00%		A3GI71              	100.00%
Bootstrap support for B9RFS4 as seed ortholog is 100%.
Bootstrap support for A3GI71 as seed ortholog is 100%.

Group of orthologs #639. Best score 263 bits
Score difference with first non-orthologous sequence - R.communis:23 S.stipitis:263

B9STH5              	100.00%		A3GGY9              	100.00%
Bootstrap support for B9STH5 as seed ortholog is 79%.
Bootstrap support for A3GGY9 as seed ortholog is 100%.

Group of orthologs #640. Best score 262 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:181

B9T334              	100.00%		A3GGX4              	100.00%
B9RCN3              	98.04%		
B9T3W7              	62.75%		
B9SLF2              	50.98%		
Bootstrap support for B9T334 as seed ortholog is 99%.
Bootstrap support for A3GGX4 as seed ortholog is 100%.

Group of orthologs #641. Best score 262 bits
Score difference with first non-orthologous sequence - R.communis:262 S.stipitis:262

B9RP10              	100.00%		A3GHT7              	100.00%
B9T553              	39.23%		
Bootstrap support for B9RP10 as seed ortholog is 100%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #642. Best score 262 bits
Score difference with first non-orthologous sequence - R.communis:262 S.stipitis:262

B9RKE1              	100.00%		A3LVG8              	100.00%
B9RQ94              	33.08%		
Bootstrap support for B9RKE1 as seed ortholog is 100%.
Bootstrap support for A3LVG8 as seed ortholog is 100%.

Group of orthologs #643. Best score 262 bits
Score difference with first non-orthologous sequence - R.communis:262 S.stipitis:83

B9SVR2              	100.00%		A3LNH5              	100.00%
Bootstrap support for B9SVR2 as seed ortholog is 100%.
Bootstrap support for A3LNH5 as seed ortholog is 95%.

Group of orthologs #644. Best score 261 bits
Score difference with first non-orthologous sequence - R.communis:261 S.stipitis:261

B9RI05              	100.00%		A3LS43              	100.00%
Bootstrap support for B9RI05 as seed ortholog is 100%.
Bootstrap support for A3LS43 as seed ortholog is 100%.

Group of orthologs #645. Best score 261 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:152

B9T002              	100.00%		A3M088              	100.00%
Bootstrap support for B9T002 as seed ortholog is 99%.
Bootstrap support for A3M088 as seed ortholog is 99%.

Group of orthologs #646. Best score 260 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:260

B9R9Q2              	100.00%		A3LUT4              	100.00%
Bootstrap support for B9R9Q2 as seed ortholog is 98%.
Bootstrap support for A3LUT4 as seed ortholog is 100%.

Group of orthologs #647. Best score 260 bits
Score difference with first non-orthologous sequence - R.communis:260 S.stipitis:260

B9T120              	100.00%		A3LMZ4              	100.00%
Bootstrap support for B9T120 as seed ortholog is 100%.
Bootstrap support for A3LMZ4 as seed ortholog is 100%.

Group of orthologs #648. Best score 259 bits
Score difference with first non-orthologous sequence - R.communis:259 S.stipitis:78

B9SNK1              	100.00%		A3GF86              	100.00%
B9SY78              	41.19%		
Bootstrap support for B9SNK1 as seed ortholog is 100%.
Bootstrap support for A3GF86 as seed ortholog is 99%.

Group of orthologs #649. Best score 259 bits
Score difference with first non-orthologous sequence - R.communis:259 S.stipitis:259

B9S4S8              	100.00%		A3LWK2              	100.00%
Bootstrap support for B9S4S8 as seed ortholog is 100%.
Bootstrap support for A3LWK2 as seed ortholog is 100%.

Group of orthologs #650. Best score 258 bits
Score difference with first non-orthologous sequence - R.communis:258 S.stipitis:258

B9SSH5              	100.00%		A3LQ48              	100.00%
B9SYZ0              	40.94%		
Bootstrap support for B9SSH5 as seed ortholog is 100%.
Bootstrap support for A3LQ48 as seed ortholog is 100%.

Group of orthologs #651. Best score 258 bits
Score difference with first non-orthologous sequence - R.communis:258 S.stipitis:258

B9RRU5              	100.00%		A3GHN5              	100.00%
Bootstrap support for B9RRU5 as seed ortholog is 100%.
Bootstrap support for A3GHN5 as seed ortholog is 100%.

Group of orthologs #652. Best score 258 bits
Score difference with first non-orthologous sequence - R.communis:136 S.stipitis:116

B9SIS4              	100.00%		A3LNS1              	100.00%
Bootstrap support for B9SIS4 as seed ortholog is 99%.
Bootstrap support for A3LNS1 as seed ortholog is 98%.

Group of orthologs #653. Best score 257 bits
Score difference with first non-orthologous sequence - R.communis:257 S.stipitis:257

B9T6I9              	100.00%		A3LW27              	100.00%
B9SXW5              	62.67%		
Bootstrap support for B9T6I9 as seed ortholog is 100%.
Bootstrap support for A3LW27 as seed ortholog is 100%.

Group of orthologs #654. Best score 257 bits
Score difference with first non-orthologous sequence - R.communis:257 S.stipitis:257

B9R6Z6              	100.00%		A3LVC9              	100.00%
Bootstrap support for B9R6Z6 as seed ortholog is 100%.
Bootstrap support for A3LVC9 as seed ortholog is 100%.

Group of orthologs #655. Best score 257 bits
Score difference with first non-orthologous sequence - R.communis:257 S.stipitis:257

B9S374              	100.00%		A3GG94              	100.00%
Bootstrap support for B9S374 as seed ortholog is 100%.
Bootstrap support for A3GG94 as seed ortholog is 100%.

Group of orthologs #656. Best score 257 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:257

B9SVT1              	100.00%		A3GGZ4              	100.00%
Bootstrap support for B9SVT1 as seed ortholog is 99%.
Bootstrap support for A3GGZ4 as seed ortholog is 100%.

Group of orthologs #657. Best score 257 bits
Score difference with first non-orthologous sequence - R.communis:257 S.stipitis:257

B9SVH0              	100.00%		A3LRZ0              	100.00%
Bootstrap support for B9SVH0 as seed ortholog is 100%.
Bootstrap support for A3LRZ0 as seed ortholog is 100%.

Group of orthologs #658. Best score 257 bits
Score difference with first non-orthologous sequence - R.communis:257 S.stipitis:257

B9T6L0              	100.00%		A3LSZ1              	100.00%
Bootstrap support for B9T6L0 as seed ortholog is 100%.
Bootstrap support for A3LSZ1 as seed ortholog is 100%.

Group of orthologs #659. Best score 256 bits
Score difference with first non-orthologous sequence - R.communis:256 S.stipitis:256

B9T668              	100.00%		A3LRV4              	100.00%
                    	       		A3LSN7              	10.97%
                    	       		A3GIE7              	9.99%
Bootstrap support for B9T668 as seed ortholog is 100%.
Bootstrap support for A3LRV4 as seed ortholog is 100%.

Group of orthologs #660. Best score 256 bits
Score difference with first non-orthologous sequence - R.communis:256 S.stipitis:256

B9SNG7              	100.00%		A3LT02              	100.00%
Bootstrap support for B9SNG7 as seed ortholog is 100%.
Bootstrap support for A3LT02 as seed ortholog is 100%.

Group of orthologs #661. Best score 255 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:160

B9SDR8              	100.00%		A3GFU4              	100.00%
B9RUS1              	96.52%		
Bootstrap support for B9SDR8 as seed ortholog is 99%.
Bootstrap support for A3GFU4 as seed ortholog is 100%.

Group of orthologs #662. Best score 255 bits
Score difference with first non-orthologous sequence - R.communis:255 S.stipitis:255

B9RR88              	100.00%		A3LN21              	100.00%
Bootstrap support for B9RR88 as seed ortholog is 100%.
Bootstrap support for A3LN21 as seed ortholog is 100%.

Group of orthologs #663. Best score 255 bits
Score difference with first non-orthologous sequence - R.communis:255 S.stipitis:255

B9SZ05              	100.00%		A3LW79              	100.00%
Bootstrap support for B9SZ05 as seed ortholog is 100%.
Bootstrap support for A3LW79 as seed ortholog is 100%.

Group of orthologs #664. Best score 255 bits
Score difference with first non-orthologous sequence - R.communis:255 S.stipitis:255

B9SXJ1              	100.00%		A3M096              	100.00%
Bootstrap support for B9SXJ1 as seed ortholog is 100%.
Bootstrap support for A3M096 as seed ortholog is 100%.

Group of orthologs #665. Best score 254 bits
Score difference with first non-orthologous sequence - R.communis:25 S.stipitis:95

B9S8C9              	100.00%		A3LXX3              	100.00%
B9SE28              	100.00%		
B9SKB2              	100.00%		
B9S3C5              	67.05%		
B9RXB1              	56.32%		
B9SGN4              	55.75%		
B9S943              	48.28%		
B9T2D5              	12.43%		
B9RHG6              	8.28%		
Bootstrap support for B9S8C9 as seed ortholog is 85%.
Bootstrap support for B9SE28 as seed ortholog is 85%.
Bootstrap support for B9SKB2 as seed ortholog is 89%.
Bootstrap support for A3LXX3 as seed ortholog is 99%.

Group of orthologs #666. Best score 254 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:254

B9R8G8              	100.00%		A3LX74              	100.00%
B9R8G7              	59.22%		
Bootstrap support for B9R8G8 as seed ortholog is 99%.
Bootstrap support for A3LX74 as seed ortholog is 100%.

Group of orthologs #667. Best score 254 bits
Score difference with first non-orthologous sequence - R.communis:254 S.stipitis:254

B9SNZ7              	100.00%		A3LX09              	100.00%
Bootstrap support for B9SNZ7 as seed ortholog is 100%.
Bootstrap support for A3LX09 as seed ortholog is 100%.

Group of orthologs #668. Best score 254 bits
Score difference with first non-orthologous sequence - R.communis:254 S.stipitis:254

B9T2L7              	100.00%		A3LQV1              	100.00%
Bootstrap support for B9T2L7 as seed ortholog is 100%.
Bootstrap support for A3LQV1 as seed ortholog is 100%.

Group of orthologs #669. Best score 253 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:253

B9RN74              	100.00%		A3LZL7              	100.00%
B9SHC5              	100.00%		
Bootstrap support for B9RN74 as seed ortholog is 100%.
Bootstrap support for B9SHC5 as seed ortholog is 100%.
Bootstrap support for A3LZL7 as seed ortholog is 100%.

Group of orthologs #670. Best score 253 bits
Score difference with first non-orthologous sequence - R.communis:253 S.stipitis:253

B9SCT8              	100.00%		A3LTA4              	100.00%
Bootstrap support for B9SCT8 as seed ortholog is 100%.
Bootstrap support for A3LTA4 as seed ortholog is 100%.

Group of orthologs #671. Best score 252 bits
Score difference with first non-orthologous sequence - R.communis:252 S.stipitis:252

B9R8Q0              	100.00%		A3LN13              	100.00%
B9SQD1              	5.62%		
Bootstrap support for B9R8Q0 as seed ortholog is 100%.
Bootstrap support for A3LN13 as seed ortholog is 100%.

Group of orthologs #672. Best score 252 bits
Score difference with first non-orthologous sequence - R.communis:252 S.stipitis:252

B9RZ56              	100.00%		A3GGW7              	100.00%
Bootstrap support for B9RZ56 as seed ortholog is 100%.
Bootstrap support for A3GGW7 as seed ortholog is 100%.

Group of orthologs #673. Best score 252 bits
Score difference with first non-orthologous sequence - R.communis:252 S.stipitis:252

B9SJ80              	100.00%		A3GI79              	100.00%
Bootstrap support for B9SJ80 as seed ortholog is 100%.
Bootstrap support for A3GI79 as seed ortholog is 100%.

Group of orthologs #674. Best score 252 bits
Score difference with first non-orthologous sequence - R.communis:252 S.stipitis:252

B9SX58              	100.00%		A3LR90              	100.00%
Bootstrap support for B9SX58 as seed ortholog is 100%.
Bootstrap support for A3LR90 as seed ortholog is 100%.

Group of orthologs #675. Best score 251 bits
Score difference with first non-orthologous sequence - R.communis:203 S.stipitis:251

B9R982              	100.00%		A3LRQ6              	100.00%
B9RUP5              	100.00%		
B9S8S9              	91.55%		
Bootstrap support for B9R982 as seed ortholog is 100%.
Bootstrap support for B9RUP5 as seed ortholog is 100%.
Bootstrap support for A3LRQ6 as seed ortholog is 100%.

Group of orthologs #676. Best score 251 bits
Score difference with first non-orthologous sequence - R.communis:251 S.stipitis:251

B9SX96              	100.00%		A3GI99              	100.00%
Bootstrap support for B9SX96 as seed ortholog is 100%.
Bootstrap support for A3GI99 as seed ortholog is 100%.

Group of orthologs #677. Best score 251 bits
Score difference with first non-orthologous sequence - R.communis:251 S.stipitis:251

B9SUG0              	100.00%		A3LS77              	100.00%
Bootstrap support for B9SUG0 as seed ortholog is 100%.
Bootstrap support for A3LS77 as seed ortholog is 100%.

Group of orthologs #678. Best score 250 bits
Score difference with first non-orthologous sequence - R.communis:40 S.stipitis:33

B9S337              	100.00%		A3GHU5              	100.00%
B9SFC1              	57.75%		A3LY10              	17.31%
Q41144              	57.62%		
B9RC21              	49.61%		
B9RTZ7              	48.84%		
B9R9W6              	48.19%		
Q07423              	47.67%		
B9SHQ2              	44.57%		
B9SC20              	44.57%		
Q10710              	44.57%		
B9SHP0              	44.44%		
B9TA41              	40.70%		
B9RRH3              	40.57%		
B9RJJ5              	39.15%		
B9RTN4              	38.63%		
B9RSJ4              	36.82%		
B9SHP7              	30.23%		
B9RJJ4              	24.81%		
Bootstrap support for B9S337 as seed ortholog is 77%.
Bootstrap support for A3GHU5 as seed ortholog is 74%.
Alternative seed ortholog is A3LQQ5 (33 bits away from this cluster)

Group of orthologs #679. Best score 250 bits
Score difference with first non-orthologous sequence - R.communis:143 S.stipitis:149

B9RZN0              	100.00%		A3LTA2              	100.00%
B9RNF8              	95.10%		
B9RFH9              	87.41%		
Bootstrap support for B9RZN0 as seed ortholog is 100%.
Bootstrap support for A3LTA2 as seed ortholog is 100%.

Group of orthologs #680. Best score 250 bits
Score difference with first non-orthologous sequence - R.communis:250 S.stipitis:21

B9SJX4              	100.00%		A3LW48              	100.00%
B9S2U5              	27.81%		
Bootstrap support for B9SJX4 as seed ortholog is 100%.
Bootstrap support for A3LW48 as seed ortholog is 67%.
Alternative seed ortholog is A3GG09 (21 bits away from this cluster)

Group of orthologs #681. Best score 250 bits
Score difference with first non-orthologous sequence - R.communis:250 S.stipitis:64

B9RIE7              	100.00%		A3LQ02              	100.00%
Bootstrap support for B9RIE7 as seed ortholog is 100%.
Bootstrap support for A3LQ02 as seed ortholog is 96%.

Group of orthologs #682. Best score 249 bits
Score difference with first non-orthologous sequence - R.communis:249 S.stipitis:249

B9R7U1              	100.00%		A3LYR0              	100.00%
B9RIS3              	100.00%		
B9RIS4              	36.90%		
B9S7T8              	30.61%		
B9SX86              	29.25%		
B9RSR5              	23.64%		
B9T4A2              	22.28%		
Bootstrap support for B9R7U1 as seed ortholog is 100%.
Bootstrap support for B9RIS3 as seed ortholog is 100%.
Bootstrap support for A3LYR0 as seed ortholog is 100%.

Group of orthologs #683. Best score 249 bits
Score difference with first non-orthologous sequence - R.communis:249 S.stipitis:249

B9RVW6              	100.00%		A3LTJ3              	100.00%
Bootstrap support for B9RVW6 as seed ortholog is 100%.
Bootstrap support for A3LTJ3 as seed ortholog is 100%.

Group of orthologs #684. Best score 248 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:248

B9RBK5              	100.00%		A3M0L9              	100.00%
Bootstrap support for B9RBK5 as seed ortholog is 99%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #685. Best score 248 bits
Score difference with first non-orthologous sequence - R.communis:248 S.stipitis:248

B9SMF4              	100.00%		A3LY82              	100.00%
Bootstrap support for B9SMF4 as seed ortholog is 100%.
Bootstrap support for A3LY82 as seed ortholog is 100%.

Group of orthologs #686. Best score 248 bits
Score difference with first non-orthologous sequence - R.communis:248 S.stipitis:248

B9T7A3              	100.00%		A3GFE2              	100.00%
Bootstrap support for B9T7A3 as seed ortholog is 100%.
Bootstrap support for A3GFE2 as seed ortholog is 100%.

Group of orthologs #687. Best score 247 bits
Score difference with first non-orthologous sequence - R.communis:247 S.stipitis:247

B9RHH9              	100.00%		A3GG12              	100.00%
B9SBI2              	5.35%		
Bootstrap support for B9RHH9 as seed ortholog is 100%.
Bootstrap support for A3GG12 as seed ortholog is 100%.

Group of orthologs #688. Best score 247 bits
Score difference with first non-orthologous sequence - R.communis:247 S.stipitis:247

B9SA80              	100.00%		A3LQF2              	100.00%
B9R7L4              	44.37%		
Bootstrap support for B9SA80 as seed ortholog is 100%.
Bootstrap support for A3LQF2 as seed ortholog is 100%.

Group of orthologs #689. Best score 247 bits
Score difference with first non-orthologous sequence - R.communis:247 S.stipitis:247

B9RU39              	100.00%		A3LZ98              	100.00%
Bootstrap support for B9RU39 as seed ortholog is 100%.
Bootstrap support for A3LZ98 as seed ortholog is 100%.

Group of orthologs #690. Best score 247 bits
Score difference with first non-orthologous sequence - R.communis:247 S.stipitis:247

B9SQR9              	100.00%		A3GFV6              	100.00%
Bootstrap support for B9SQR9 as seed ortholog is 100%.
Bootstrap support for A3GFV6 as seed ortholog is 100%.

Group of orthologs #691. Best score 247 bits
Score difference with first non-orthologous sequence - R.communis:247 S.stipitis:247

B9T1L2              	100.00%		A3GHJ3              	100.00%
Bootstrap support for B9T1L2 as seed ortholog is 100%.
Bootstrap support for A3GHJ3 as seed ortholog is 100%.

Group of orthologs #692. Best score 246 bits
Score difference with first non-orthologous sequence - R.communis:246 S.stipitis:246

B9SMT1              	100.00%		A3GI37              	100.00%
B9S2W5              	42.89%		A3LMV3              	18.42%
B9S2W4              	41.54%		A3LYD2              	13.17%
B9SG31              	10.05%		
B9R736              	9.07%		
Bootstrap support for B9SMT1 as seed ortholog is 100%.
Bootstrap support for A3GI37 as seed ortholog is 100%.

Group of orthologs #693. Best score 246 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:246

B9R8H6              	100.00%		A3LT93              	100.00%
Bootstrap support for B9R8H6 as seed ortholog is 100%.
Bootstrap support for A3LT93 as seed ortholog is 100%.

Group of orthologs #694. Best score 245 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:10

B9SNS3              	100.00%		A3GG91              	100.00%
B9SNR9              	71.72%		A3LTI2              	47.31%
B9SKI9              	56.11%		
Bootstrap support for B9SNS3 as seed ortholog is 100%.
Bootstrap support for A3GG91 as seed ortholog is 99%.

Group of orthologs #695. Best score 245 bits
Score difference with first non-orthologous sequence - R.communis:245 S.stipitis:245

B9S674              	100.00%		A3LPT4              	100.00%
B9S0W5              	62.70%		
B9RBK1              	59.65%		
Bootstrap support for B9S674 as seed ortholog is 100%.
Bootstrap support for A3LPT4 as seed ortholog is 100%.

Group of orthologs #696. Best score 245 bits
Score difference with first non-orthologous sequence - R.communis:245 S.stipitis:245

B9RH01              	100.00%		A3LVK2              	100.00%
B9RH52              	100.00%		
Bootstrap support for B9RH01 as seed ortholog is 100%.
Bootstrap support for B9RH52 as seed ortholog is 100%.
Bootstrap support for A3LVK2 as seed ortholog is 100%.

Group of orthologs #697. Best score 245 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:92

B9RMJ0              	100.00%		A3LV51              	100.00%
B9RAI9              	81.17%		
Bootstrap support for B9RMJ0 as seed ortholog is 100%.
Bootstrap support for A3LV51 as seed ortholog is 99%.

Group of orthologs #698. Best score 245 bits
Score difference with first non-orthologous sequence - R.communis:245 S.stipitis:245

B9RG60              	100.00%		A3LWX2              	100.00%
Bootstrap support for B9RG60 as seed ortholog is 100%.
Bootstrap support for A3LWX2 as seed ortholog is 100%.

Group of orthologs #699. Best score 244 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:44

B9SW21              	100.00%		A3M0N3              	100.00%
B9SW15              	75.43%		A3LZS0              	32.31%
B9RTZ5              	53.37%		A3GES9              	11.96%
B9SHX8              	45.57%		F2Z689              	11.96%
B9SHX9              	40.82%		F2Z690              	11.96%
                    	       		F2Z662              	10.73%
Bootstrap support for B9SW21 as seed ortholog is 84%.
Bootstrap support for A3M0N3 as seed ortholog is 83%.

Group of orthologs #700. Best score 244 bits
Score difference with first non-orthologous sequence - R.communis:244 S.stipitis:244

B9SJI7              	100.00%		A3LRH9              	100.00%
Bootstrap support for B9SJI7 as seed ortholog is 100%.
Bootstrap support for A3LRH9 as seed ortholog is 100%.

Group of orthologs #701. Best score 244 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:244

B9STS5              	100.00%		A3LNS4              	100.00%
Bootstrap support for B9STS5 as seed ortholog is 99%.
Bootstrap support for A3LNS4 as seed ortholog is 100%.

Group of orthologs #702. Best score 243 bits
Score difference with first non-orthologous sequence - R.communis:243 S.stipitis:243

B9S5D3              	100.00%		A3LZJ1              	100.00%
B9RE48              	49.17%		
Bootstrap support for B9S5D3 as seed ortholog is 100%.
Bootstrap support for A3LZJ1 as seed ortholog is 100%.

Group of orthologs #703. Best score 243 bits
Score difference with first non-orthologous sequence - R.communis:243 S.stipitis:243

B9SSR3              	100.00%		A3LT20              	100.00%
B9T7X5              	81.73%		
Bootstrap support for B9SSR3 as seed ortholog is 100%.
Bootstrap support for A3LT20 as seed ortholog is 100%.

Group of orthologs #704. Best score 243 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:243

B9R9N0              	100.00%		A3GGN7              	100.00%
Bootstrap support for B9R9N0 as seed ortholog is 99%.
Bootstrap support for A3GGN7 as seed ortholog is 100%.

Group of orthologs #705. Best score 242 bits
Score difference with first non-orthologous sequence - R.communis:242 S.stipitis:100

B9S933              	100.00%		A3LXD5              	100.00%
B9R846              	68.18%		A3GHN6              	66.67%
Bootstrap support for B9S933 as seed ortholog is 100%.
Bootstrap support for A3LXD5 as seed ortholog is 100%.

Group of orthologs #706. Best score 242 bits
Score difference with first non-orthologous sequence - R.communis:164 S.stipitis:242

B9RBF2              	100.00%		A3LRW9              	100.00%
Bootstrap support for B9RBF2 as seed ortholog is 100%.
Bootstrap support for A3LRW9 as seed ortholog is 100%.

Group of orthologs #707. Best score 242 bits
Score difference with first non-orthologous sequence - R.communis:242 S.stipitis:242

B9SUS1              	100.00%		A3GHZ3              	100.00%
Bootstrap support for B9SUS1 as seed ortholog is 100%.
Bootstrap support for A3GHZ3 as seed ortholog is 100%.

Group of orthologs #708. Best score 242 bits
Score difference with first non-orthologous sequence - R.communis:242 S.stipitis:242

B9SXG8              	100.00%		A3GG07              	100.00%
Bootstrap support for B9SXG8 as seed ortholog is 100%.
Bootstrap support for A3GG07 as seed ortholog is 100%.

Group of orthologs #709. Best score 242 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:157

B9T845              	100.00%		A3GHF5              	100.00%
Bootstrap support for B9T845 as seed ortholog is 99%.
Bootstrap support for A3GHF5 as seed ortholog is 99%.

Group of orthologs #710. Best score 241 bits
Score difference with first non-orthologous sequence - R.communis:7 S.stipitis:241

B9T0D3              	100.00%		A3LXS9              	100.00%
B9RMD2              	49.75%		
B9SNH2              	45.43%		
Bootstrap support for B9T0D3 as seed ortholog is 57%.
Alternative seed ortholog is B9T9C7 (7 bits away from this cluster)
Bootstrap support for A3LXS9 as seed ortholog is 100%.

Group of orthologs #711. Best score 240 bits
Score difference with first non-orthologous sequence - R.communis:68 S.stipitis:80

B9R8D9              	100.00%		A3LT79              	16.77%
B9T7Z6              	100.00%		A3LSQ4              	100.00%
B9T7R7              	79.84%		A3GHR6              	12.62%
B9T7Z8              	78.23%		A3GHL4              	11.05%
B9SVQ2              	54.44%		A3LSI9              	10.65%
B9RY91              	32.06%		
B9RYZ2              	26.61%		
B9SG09              	25.81%		
Bootstrap support for B9R8D9 as seed ortholog is 97%.
Bootstrap support for B9T7Z6 as seed ortholog is 97%.
Bootstrap support for A3LSQ4 as seed ortholog is 93%.

Group of orthologs #712. Best score 240 bits
Score difference with first non-orthologous sequence - R.communis:240 S.stipitis:240

B9SPA6              	100.00%		A3GG79              	100.00%
B9RKM3              	36.42%		
Bootstrap support for B9SPA6 as seed ortholog is 100%.
Bootstrap support for A3GG79 as seed ortholog is 100%.

Group of orthologs #713. Best score 240 bits
Score difference with first non-orthologous sequence - R.communis:240 S.stipitis:240

B9RFL1              	100.00%		A3LPU9              	100.00%
Bootstrap support for B9RFL1 as seed ortholog is 100%.
Bootstrap support for A3LPU9 as seed ortholog is 100%.

Group of orthologs #714. Best score 240 bits
Score difference with first non-orthologous sequence - R.communis:182 S.stipitis:184

B9RQU7              	100.00%		A3LRU7              	100.00%
Bootstrap support for B9RQU7 as seed ortholog is 100%.
Bootstrap support for A3LRU7 as seed ortholog is 100%.

Group of orthologs #715. Best score 239 bits
Score difference with first non-orthologous sequence - R.communis:239 S.stipitis:239

B9RRR1              	100.00%		A3LUE2              	100.00%
B9RDZ7              	65.01%		
Bootstrap support for B9RRR1 as seed ortholog is 100%.
Bootstrap support for A3LUE2 as seed ortholog is 100%.

Group of orthologs #716. Best score 239 bits
Score difference with first non-orthologous sequence - R.communis:239 S.stipitis:239

B9S8B5              	100.00%		A3LVZ0              	100.00%
B9R7U8              	96.80%		
Bootstrap support for B9S8B5 as seed ortholog is 100%.
Bootstrap support for A3LVZ0 as seed ortholog is 100%.

Group of orthologs #717. Best score 239 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:239

B9R906              	100.00%		A3LVL3              	100.00%
Bootstrap support for B9R906 as seed ortholog is 96%.
Bootstrap support for A3LVL3 as seed ortholog is 100%.

Group of orthologs #718. Best score 239 bits
Score difference with first non-orthologous sequence - R.communis:239 S.stipitis:239

B9S992              	100.00%		A3LWH6              	100.00%
Bootstrap support for B9S992 as seed ortholog is 100%.
Bootstrap support for A3LWH6 as seed ortholog is 100%.

Group of orthologs #719. Best score 239 bits
Score difference with first non-orthologous sequence - R.communis:239 S.stipitis:239

B9SKU4              	100.00%		A3LQ53              	100.00%
Bootstrap support for B9SKU4 as seed ortholog is 100%.
Bootstrap support for A3LQ53 as seed ortholog is 100%.

Group of orthologs #720. Best score 238 bits
Score difference with first non-orthologous sequence - R.communis:40 S.stipitis:11

B9SRT9              	100.00%		A3LYD5              	100.00%
B9R905              	27.42%		A3LPK9              	55.62%
Bootstrap support for B9SRT9 as seed ortholog is 90%.
Bootstrap support for A3LYD5 as seed ortholog is 63%.
Alternative seed ortholog is A3LQI1 (11 bits away from this cluster)

Group of orthologs #721. Best score 238 bits
Score difference with first non-orthologous sequence - R.communis:238 S.stipitis:238

B9T8N6              	100.00%		A3LS75              	100.00%
Bootstrap support for B9T8N6 as seed ortholog is 100%.
Bootstrap support for A3LS75 as seed ortholog is 100%.

Group of orthologs #722. Best score 238 bits
Score difference with first non-orthologous sequence - R.communis:238 S.stipitis:238

B9TB58              	100.00%		A3LXJ6              	100.00%
Bootstrap support for B9TB58 as seed ortholog is 100%.
Bootstrap support for A3LXJ6 as seed ortholog is 100%.

Group of orthologs #723. Best score 237 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:57

B9RET7              	100.00%		A3LRC4              	100.00%
B9RET8              	77.30%		
B9RET9              	66.58%		
B9RET4              	64.03%		
B9RTR4              	62.76%		
B9RET5              	61.22%		
B9SFU8              	53.83%		
B9RDU1              	42.35%		
B9RZ17              	37.50%		
B9RET6              	34.95%		
B9SY80              	29.34%		
Bootstrap support for B9RET7 as seed ortholog is 99%.
Bootstrap support for A3LRC4 as seed ortholog is 92%.

Group of orthologs #724. Best score 236 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:236

B9RDY4              	100.00%		A3GFD5              	100.00%
Bootstrap support for B9RDY4 as seed ortholog is 99%.
Bootstrap support for A3GFD5 as seed ortholog is 100%.

Group of orthologs #725. Best score 236 bits
Score difference with first non-orthologous sequence - R.communis:236 S.stipitis:236

B9S4E5              	100.00%		A3LZB4              	100.00%
Bootstrap support for B9S4E5 as seed ortholog is 100%.
Bootstrap support for A3LZB4 as seed ortholog is 100%.

Group of orthologs #726. Best score 236 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:236

B9SR69              	100.00%		A3GH30              	100.00%
Bootstrap support for B9SR69 as seed ortholog is 99%.
Bootstrap support for A3GH30 as seed ortholog is 100%.

Group of orthologs #727. Best score 236 bits
Score difference with first non-orthologous sequence - R.communis:236 S.stipitis:236

B9T9U4              	100.00%		A3LW04              	100.00%
Bootstrap support for B9T9U4 as seed ortholog is 100%.
Bootstrap support for A3LW04 as seed ortholog is 100%.

Group of orthologs #728. Best score 235 bits
Score difference with first non-orthologous sequence - R.communis:107 S.stipitis:110

B9RBE1              	100.00%		A3LTR3              	100.00%
B9RQM0              	79.46%		
B9SM85              	44.32%		
B9T1R6              	32.43%		
Bootstrap support for B9RBE1 as seed ortholog is 99%.
Bootstrap support for A3LTR3 as seed ortholog is 99%.

Group of orthologs #729. Best score 235 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:235

B9S4C3              	100.00%		A3LW87              	100.00%
B9SGB6              	30.44%		
Bootstrap support for B9S4C3 as seed ortholog is 100%.
Bootstrap support for A3LW87 as seed ortholog is 100%.

Group of orthologs #730. Best score 235 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:235

B9R7X1              	100.00%		A3LPI7              	100.00%
Bootstrap support for B9R7X1 as seed ortholog is 100%.
Bootstrap support for A3LPI7 as seed ortholog is 100%.

Group of orthologs #731. Best score 235 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:52

B9RQY3              	100.00%		A3LQM3              	100.00%
Bootstrap support for B9RQY3 as seed ortholog is 100%.
Bootstrap support for A3LQM3 as seed ortholog is 88%.

Group of orthologs #732. Best score 235 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:235

B9SZB6              	100.00%		A3LWC0              	100.00%
Bootstrap support for B9SZB6 as seed ortholog is 100%.
Bootstrap support for A3LWC0 as seed ortholog is 100%.

Group of orthologs #733. Best score 235 bits
Score difference with first non-orthologous sequence - R.communis:235 S.stipitis:235

B9T565              	100.00%		A3LR29              	100.00%
Bootstrap support for B9T565 as seed ortholog is 100%.
Bootstrap support for A3LR29 as seed ortholog is 100%.

Group of orthologs #734. Best score 234 bits
Score difference with first non-orthologous sequence - R.communis:153 S.stipitis:167

B9RDU4              	100.00%		A3LRC8              	100.00%
B9RCE6              	78.00%		
B9RB60              	37.33%		
B9RUC3              	25.33%		
Bootstrap support for B9RDU4 as seed ortholog is 100%.
Bootstrap support for A3LRC8 as seed ortholog is 100%.

Group of orthologs #735. Best score 234 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:93

B9SKH4              	100.00%		A3LXT6              	100.00%
B9SS18              	91.18%		
B9SZ42              	75.88%		
Bootstrap support for B9SKH4 as seed ortholog is 99%.
Bootstrap support for A3LXT6 as seed ortholog is 99%.

Group of orthologs #736. Best score 234 bits
Score difference with first non-orthologous sequence - R.communis:27 S.stipitis:126

B9TIY2              	100.00%		A3LRT1              	100.00%
                    	       		A3LSP1              	40.76%
Bootstrap support for B9TIY2 as seed ortholog is 72%.
Alternative seed ortholog is B9T8J4 (27 bits away from this cluster)
Bootstrap support for A3LRT1 as seed ortholog is 99%.

Group of orthologs #737. Best score 234 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:189

B9RBE4              	100.00%		A3LVU6              	100.00%
Bootstrap support for B9RBE4 as seed ortholog is 99%.
Bootstrap support for A3LVU6 as seed ortholog is 99%.

Group of orthologs #738. Best score 234 bits
Score difference with first non-orthologous sequence - R.communis:234 S.stipitis:234

B9SBK6              	100.00%		A3LPM8              	100.00%
Bootstrap support for B9SBK6 as seed ortholog is 100%.
Bootstrap support for A3LPM8 as seed ortholog is 100%.

Group of orthologs #739. Best score 234 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:48

B9T4U6              	100.00%		A3LTU9              	100.00%
Bootstrap support for B9T4U6 as seed ortholog is 100%.
Bootstrap support for A3LTU9 as seed ortholog is 90%.

Group of orthologs #740. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:166 S.stipitis:233

B9RX33              	100.00%		A3LTU4              	100.00%
B9R6Q9              	7.25%		A3LQ79              	13.69%
Bootstrap support for B9RX33 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 100%.

Group of orthologs #741. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:148

B9RA47              	100.00%		A3LTV4              	100.00%
B9RGV3              	43.91%		
Bootstrap support for B9RA47 as seed ortholog is 99%.
Bootstrap support for A3LTV4 as seed ortholog is 99%.

Group of orthologs #742. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:173 S.stipitis:233

B9S120              	100.00%		A3LQJ1              	100.00%
B9SCW1              	93.94%		
Bootstrap support for B9S120 as seed ortholog is 100%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #743. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:233 S.stipitis:233

B9SAL7              	100.00%		A3GF08              	100.00%
B9T370              	100.00%		
Bootstrap support for B9SAL7 as seed ortholog is 100%.
Bootstrap support for B9T370 as seed ortholog is 100%.
Bootstrap support for A3GF08 as seed ortholog is 100%.

Group of orthologs #744. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:233

B9SAV9              	100.00%		A3GHI8              	100.00%
B9RTA4              	84.27%		
Bootstrap support for B9SAV9 as seed ortholog is 99%.
Bootstrap support for A3GHI8 as seed ortholog is 100%.

Group of orthologs #745. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:233

B9RDA6              	100.00%		A3LUZ2              	100.00%
Bootstrap support for B9RDA6 as seed ortholog is 100%.
Bootstrap support for A3LUZ2 as seed ortholog is 100%.

Group of orthologs #746. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:158

B9RUT5              	100.00%		A3LS53              	100.00%
Bootstrap support for B9RUT5 as seed ortholog is 97%.
Bootstrap support for A3LS53 as seed ortholog is 99%.

Group of orthologs #747. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:233 S.stipitis:233

B9S699              	100.00%		A3GGB8              	100.00%
Bootstrap support for B9S699 as seed ortholog is 100%.
Bootstrap support for A3GGB8 as seed ortholog is 100%.

Group of orthologs #748. Best score 233 bits
Score difference with first non-orthologous sequence - R.communis:233 S.stipitis:233

B9ST37              	100.00%		A3GGP2              	100.00%
Bootstrap support for B9ST37 as seed ortholog is 100%.
Bootstrap support for A3GGP2 as seed ortholog is 100%.

Group of orthologs #749. Best score 232 bits
Score difference with first non-orthologous sequence - R.communis:232 S.stipitis:232

B9RE25              	100.00%		A3LRQ8              	100.00%
Bootstrap support for B9RE25 as seed ortholog is 100%.
Bootstrap support for A3LRQ8 as seed ortholog is 100%.

Group of orthologs #750. Best score 232 bits
Score difference with first non-orthologous sequence - R.communis:232 S.stipitis:232

B9SVT0              	100.00%		A3LVW8              	100.00%
Bootstrap support for B9SVT0 as seed ortholog is 100%.
Bootstrap support for A3LVW8 as seed ortholog is 100%.

Group of orthologs #751. Best score 232 bits
Score difference with first non-orthologous sequence - R.communis:232 S.stipitis:232

B9T3P0              	100.00%		A3LY31              	100.00%
Bootstrap support for B9T3P0 as seed ortholog is 100%.
Bootstrap support for A3LY31 as seed ortholog is 100%.

Group of orthologs #752. Best score 231 bits
Score difference with first non-orthologous sequence - R.communis:231 S.stipitis:231

B9SWT2              	100.00%		A3LTI0              	100.00%
B9SMG1              	31.22%		
Bootstrap support for B9SWT2 as seed ortholog is 100%.
Bootstrap support for A3LTI0 as seed ortholog is 100%.

Group of orthologs #753. Best score 231 bits
Score difference with first non-orthologous sequence - R.communis:231 S.stipitis:231

B9RSU5              	100.00%		A3LVU3              	100.00%
Bootstrap support for B9RSU5 as seed ortholog is 100%.
Bootstrap support for A3LVU3 as seed ortholog is 100%.

Group of orthologs #754. Best score 231 bits
Score difference with first non-orthologous sequence - R.communis:67 S.stipitis:68

B9S4Y5              	100.00%		A3GGP3              	100.00%
Bootstrap support for B9S4Y5 as seed ortholog is 94%.
Bootstrap support for A3GGP3 as seed ortholog is 95%.

Group of orthologs #755. Best score 231 bits
Score difference with first non-orthologous sequence - R.communis:231 S.stipitis:231

B9SHH5              	100.00%		A3LQB9              	100.00%
Bootstrap support for B9SHH5 as seed ortholog is 100%.
Bootstrap support for A3LQB9 as seed ortholog is 100%.

Group of orthologs #756. Best score 231 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:156

B9SBK8              	100.00%		A3LZD6              	100.00%
Bootstrap support for B9SBK8 as seed ortholog is 100%.
Bootstrap support for A3LZD6 as seed ortholog is 100%.

Group of orthologs #757. Best score 230 bits
Score difference with first non-orthologous sequence - R.communis:11 S.stipitis:32

B9SV52              	100.00%		P31867              	100.00%
B9SV53              	100.00%		
B9SV51              	79.22%		
B9SV48              	46.70%		
B9S2J0              	8.90%		
B9R9U3              	5.94%		
Bootstrap support for B9SV52 as seed ortholog is 60%.
Alternative seed ortholog is B9RG54 (11 bits away from this cluster)
Bootstrap support for B9SV53 as seed ortholog is 65%.
Alternative seed ortholog is B9RG54 (11 bits away from this cluster)
Bootstrap support for P31867 as seed ortholog is 81%.

Group of orthologs #758. Best score 230 bits
Score difference with first non-orthologous sequence - R.communis:230 S.stipitis:230

B9RDY5              	100.00%		A3LYH1              	100.00%
Bootstrap support for B9RDY5 as seed ortholog is 100%.
Bootstrap support for A3LYH1 as seed ortholog is 100%.

Group of orthologs #759. Best score 230 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:230

B9RN56              	100.00%		A3LTN5              	100.00%
Bootstrap support for B9RN56 as seed ortholog is 99%.
Bootstrap support for A3LTN5 as seed ortholog is 100%.

Group of orthologs #760. Best score 230 bits
Score difference with first non-orthologous sequence - R.communis:230 S.stipitis:230

B9RU27              	100.00%		A3LVB4              	100.00%
Bootstrap support for B9RU27 as seed ortholog is 100%.
Bootstrap support for A3LVB4 as seed ortholog is 100%.

Group of orthologs #761. Best score 229 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:229

B9S0D1              	100.00%		A3LZY0              	100.00%
B9STH0              	38.11%		
B9RJA3              	30.46%		
B9RHQ1              	29.17%		
B9RG97              	26.78%		
B9SLP7              	25.96%		
Bootstrap support for B9S0D1 as seed ortholog is 98%.
Bootstrap support for A3LZY0 as seed ortholog is 100%.

Group of orthologs #762. Best score 229 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:229

B9SWK1              	100.00%		A3LW70              	100.00%
B9S2X5              	38.57%		
B9RHB3              	29.06%		
B9SZX8              	7.48%		
B9R6W4              	5.05%		
Bootstrap support for B9SWK1 as seed ortholog is 84%.
Bootstrap support for A3LW70 as seed ortholog is 100%.

Group of orthologs #763. Best score 229 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:79

B9T7J3              	100.00%		A3LVB6              	100.00%
B9RV92              	27.12%		
B9SU82              	13.79%		
Bootstrap support for B9T7J3 as seed ortholog is 71%.
Alternative seed ortholog is B9RJS6 (33 bits away from this cluster)
Bootstrap support for A3LVB6 as seed ortholog is 92%.

Group of orthologs #764. Best score 229 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:229

B9RNP1              	100.00%		A3LR65              	100.00%
Bootstrap support for B9RNP1 as seed ortholog is 100%.
Bootstrap support for A3LR65 as seed ortholog is 100%.

Group of orthologs #765. Best score 228 bits
Score difference with first non-orthologous sequence - R.communis:228 S.stipitis:228

B9S2W9              	100.00%		A3LY94              	100.00%
Bootstrap support for B9S2W9 as seed ortholog is 100%.
Bootstrap support for A3LY94 as seed ortholog is 100%.

Group of orthologs #766. Best score 228 bits
Score difference with first non-orthologous sequence - R.communis:145 S.stipitis:163

B9SHB9              	100.00%		A3GI13              	100.00%
Bootstrap support for B9SHB9 as seed ortholog is 99%.
Bootstrap support for A3GI13 as seed ortholog is 100%.

Group of orthologs #767. Best score 227 bits
Score difference with first non-orthologous sequence - R.communis:227 S.stipitis:70

B9RJN0              	100.00%		A3LNJ4              	100.00%
Bootstrap support for B9RJN0 as seed ortholog is 100%.
Bootstrap support for A3LNJ4 as seed ortholog is 96%.

Group of orthologs #768. Best score 227 bits
Score difference with first non-orthologous sequence - R.communis:227 S.stipitis:227

B9SD33              	100.00%		A3LQK6              	100.00%
Bootstrap support for B9SD33 as seed ortholog is 100%.
Bootstrap support for A3LQK6 as seed ortholog is 100%.

Group of orthologs #769. Best score 227 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:227

B9SKN6              	100.00%		A3LT69              	100.00%
Bootstrap support for B9SKN6 as seed ortholog is 100%.
Bootstrap support for A3LT69 as seed ortholog is 100%.

Group of orthologs #770. Best score 227 bits
Score difference with first non-orthologous sequence - R.communis:227 S.stipitis:227

B9SQP3              	100.00%		A3LTA7              	100.00%
Bootstrap support for B9SQP3 as seed ortholog is 100%.
Bootstrap support for A3LTA7 as seed ortholog is 100%.

Group of orthologs #771. Best score 227 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:227

B9T5Z4              	100.00%		A3GGG6              	100.00%
Bootstrap support for B9T5Z4 as seed ortholog is 100%.
Bootstrap support for A3GGG6 as seed ortholog is 100%.

Group of orthologs #772. Best score 226 bits
Score difference with first non-orthologous sequence - R.communis:226 S.stipitis:226

B9RI64              	100.00%		A3LRU3              	100.00%
Bootstrap support for B9RI64 as seed ortholog is 100%.
Bootstrap support for A3LRU3 as seed ortholog is 100%.

Group of orthologs #773. Best score 226 bits
Score difference with first non-orthologous sequence - R.communis:145 S.stipitis:226

B9RZT4              	100.00%		A3LR62              	100.00%
Bootstrap support for B9RZT4 as seed ortholog is 99%.
Bootstrap support for A3LR62 as seed ortholog is 100%.

Group of orthologs #774. Best score 225 bits
Score difference with first non-orthologous sequence - R.communis:225 S.stipitis:50

B9T4A8              	100.00%		A3GHH4              	100.00%
B9RXG3              	67.16%		A3LQH6              	21.12%
B9STM2              	58.66%		
B9S1E8              	53.82%		
B9SVJ7              	15.21%		
B9S919              	14.74%		
B9R6U4              	12.09%		
B9RGD1              	10.92%		
B9SYI4              	6.86%		
Bootstrap support for B9T4A8 as seed ortholog is 100%.
Bootstrap support for A3GHH4 as seed ortholog is 80%.

Group of orthologs #775. Best score 225 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:145

B9RNT9              	100.00%		A3LW63              	100.00%
B9SXP1              	38.74%		
Bootstrap support for B9RNT9 as seed ortholog is 95%.
Bootstrap support for A3LW63 as seed ortholog is 99%.

Group of orthologs #776. Best score 225 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:225

B9SIG6              	100.00%		A3GGN0              	100.00%
B9SFD0              	41.75%		
Bootstrap support for B9SIG6 as seed ortholog is 99%.
Bootstrap support for A3GGN0 as seed ortholog is 100%.

Group of orthologs #777. Best score 225 bits
Score difference with first non-orthologous sequence - R.communis:225 S.stipitis:225

B9SNZ3              	100.00%		A3LUJ2              	100.00%
Bootstrap support for B9SNZ3 as seed ortholog is 100%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #778. Best score 225 bits
Score difference with first non-orthologous sequence - R.communis:225 S.stipitis:225

B9SXI8              	100.00%		A3LNR7              	100.00%
Bootstrap support for B9SXI8 as seed ortholog is 100%.
Bootstrap support for A3LNR7 as seed ortholog is 100%.

Group of orthologs #779. Best score 224 bits
Score difference with first non-orthologous sequence - R.communis:224 S.stipitis:224

B9T2A0              	100.00%		A3LZS3              	100.00%
Bootstrap support for B9T2A0 as seed ortholog is 100%.
Bootstrap support for A3LZS3 as seed ortholog is 100%.

Group of orthologs #780. Best score 223 bits
Score difference with first non-orthologous sequence - R.communis:20 S.stipitis:63

B9S7J2              	100.00%		A3LPG3              	100.00%
Q8VX73              	47.52%		
B9SI28              	12.77%		
B9T5X9              	10.64%		
Bootstrap support for B9S7J2 as seed ortholog is 80%.
Bootstrap support for A3LPG3 as seed ortholog is 99%.

Group of orthologs #781. Best score 223 bits
Score difference with first non-orthologous sequence - R.communis:223 S.stipitis:62

B9RNU7              	100.00%		A3M0I2              	100.00%
B9RGM9              	23.73%		
Bootstrap support for B9RNU7 as seed ortholog is 100%.
Bootstrap support for A3M0I2 as seed ortholog is 90%.

Group of orthologs #782. Best score 223 bits
Score difference with first non-orthologous sequence - R.communis:223 S.stipitis:57

B9RAA4              	100.00%		A3LZB1              	100.00%
Bootstrap support for B9RAA4 as seed ortholog is 100%.
Bootstrap support for A3LZB1 as seed ortholog is 92%.

Group of orthologs #783. Best score 223 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:121

B9S2A8              	100.00%		A3LY45              	100.00%
Bootstrap support for B9S2A8 as seed ortholog is 99%.
Bootstrap support for A3LY45 as seed ortholog is 100%.

Group of orthologs #784. Best score 223 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:223

B9SR18              	100.00%		A3LNS6              	100.00%
Bootstrap support for B9SR18 as seed ortholog is 99%.
Bootstrap support for A3LNS6 as seed ortholog is 100%.

Group of orthologs #785. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:222

B9S8E2              	100.00%		A3GGN4              	100.00%
B9RWG5              	50.46%		
B9S200              	38.89%		
Bootstrap support for B9S8E2 as seed ortholog is 99%.
Bootstrap support for A3GGN4 as seed ortholog is 100%.

Group of orthologs #786. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:103 S.stipitis:139

B9RJ63              	100.00%		A3LUM6              	100.00%
B9RNI3              	9.63%		
Bootstrap support for B9RJ63 as seed ortholog is 99%.
Bootstrap support for A3LUM6 as seed ortholog is 99%.

Group of orthologs #787. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:222 S.stipitis:222

B9T6E0              	100.00%		A3LV87              	100.00%
B9R834              	40.10%		
Bootstrap support for B9T6E0 as seed ortholog is 100%.
Bootstrap support for A3LV87 as seed ortholog is 100%.

Group of orthologs #788. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:222 S.stipitis:222

B9SK47              	100.00%		A3LN57              	100.00%
Bootstrap support for B9SK47 as seed ortholog is 100%.
Bootstrap support for A3LN57 as seed ortholog is 100%.

Group of orthologs #789. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:222 S.stipitis:222

B9SR33              	100.00%		A3GF58              	100.00%
Bootstrap support for B9SR33 as seed ortholog is 100%.
Bootstrap support for A3GF58 as seed ortholog is 100%.

Group of orthologs #790. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:222 S.stipitis:222

B9T020              	100.00%		A3GGB4              	100.00%
Bootstrap support for B9T020 as seed ortholog is 100%.
Bootstrap support for A3GGB4 as seed ortholog is 100%.

Group of orthologs #791. Best score 222 bits
Score difference with first non-orthologous sequence - R.communis:222 S.stipitis:222

B9T1Q1              	100.00%		A3GH69              	100.00%
Bootstrap support for B9T1Q1 as seed ortholog is 100%.
Bootstrap support for A3GH69 as seed ortholog is 100%.

Group of orthologs #792. Best score 221 bits
Score difference with first non-orthologous sequence - R.communis:221 S.stipitis:221

B9SSQ7              	100.00%		A3LUU6              	100.00%
B9REW3              	49.32%		
B9S3W7              	47.08%		
B9RSZ3              	46.83%		
B9RF15              	43.48%		
Bootstrap support for B9SSQ7 as seed ortholog is 100%.
Bootstrap support for A3LUU6 as seed ortholog is 100%.

Group of orthologs #793. Best score 221 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:221

B9RMV5              	100.00%		A3GH58              	100.00%
B9SV43              	19.47%		
Bootstrap support for B9RMV5 as seed ortholog is 100%.
Bootstrap support for A3GH58 as seed ortholog is 100%.

Group of orthologs #794. Best score 221 bits
Score difference with first non-orthologous sequence - R.communis:221 S.stipitis:221

B9RBE7              	100.00%		A3M087              	100.00%
Bootstrap support for B9RBE7 as seed ortholog is 100%.
Bootstrap support for A3M087 as seed ortholog is 100%.

Group of orthologs #795. Best score 221 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:221

B9S541              	100.00%		A3GH80              	100.00%
Bootstrap support for B9S541 as seed ortholog is 99%.
Bootstrap support for A3GH80 as seed ortholog is 100%.

Group of orthologs #796. Best score 221 bits
Score difference with first non-orthologous sequence - R.communis:221 S.stipitis:221

B9SLD2              	100.00%		A3GGA8              	100.00%
Bootstrap support for B9SLD2 as seed ortholog is 100%.
Bootstrap support for A3GGA8 as seed ortholog is 100%.

Group of orthologs #797. Best score 221 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:221

B9SM90              	100.00%		A3LX03              	100.00%
Bootstrap support for B9SM90 as seed ortholog is 99%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #798. Best score 220 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:95

B9RJH7              	100.00%		A3LZB8              	100.00%
B9SWA4              	35.09%		
Bootstrap support for B9RJH7 as seed ortholog is 99%.
Bootstrap support for A3LZB8 as seed ortholog is 99%.

Group of orthologs #799. Best score 220 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:127

B9RKE7              	100.00%		A3LZ87              	100.00%
B9RQC8              	54.27%		
Bootstrap support for B9RKE7 as seed ortholog is 96%.
Bootstrap support for A3LZ87 as seed ortholog is 99%.

Group of orthologs #800. Best score 220 bits
Score difference with first non-orthologous sequence - R.communis:68 S.stipitis:62

B9SAW7              	100.00%		A3LU34              	100.00%
B9SLZ3              	50.98%		
Bootstrap support for B9SAW7 as seed ortholog is 92%.
Bootstrap support for A3LU34 as seed ortholog is 95%.

Group of orthologs #801. Best score 220 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:69

B9SE17              	100.00%		A3LUA8              	100.00%
B9SVS7              	34.47%		
Bootstrap support for B9SE17 as seed ortholog is 98%.
Bootstrap support for A3LUA8 as seed ortholog is 94%.

Group of orthologs #802. Best score 220 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:220

B9RG11              	100.00%		A3LZ81              	100.00%
Bootstrap support for B9RG11 as seed ortholog is 99%.
Bootstrap support for A3LZ81 as seed ortholog is 100%.

Group of orthologs #803. Best score 219 bits
Score difference with first non-orthologous sequence - R.communis:219 S.stipitis:219

B9SIX4              	100.00%		A3GH22              	100.00%
Bootstrap support for B9SIX4 as seed ortholog is 100%.
Bootstrap support for A3GH22 as seed ortholog is 100%.

Group of orthologs #804. Best score 218 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:35

B9S945              	100.00%		A3LQE1              	100.00%
B9SXU8              	100.00%		A3LNM5              	100.00%
B9SKF1              	100.00%		
B9R8C2              	89.44%		
B9SYU4              	86.67%		
B9SGN2              	80.77%		
B9RB64              	65.00%		
B9RKN0              	54.44%		
Bootstrap support for B9S945 as seed ortholog is 100%.
Bootstrap support for B9SXU8 as seed ortholog is 100%.
Bootstrap support for B9SKF1 as seed ortholog is 100%.
Bootstrap support for A3LQE1 as seed ortholog is 92%.
Bootstrap support for A3LNM5 as seed ortholog is 87%.

Group of orthologs #805. Best score 218 bits
Score difference with first non-orthologous sequence - R.communis:173 S.stipitis:77

B9RIB9              	100.00%		A3GHN7              	100.00%
B9RXN0              	30.37%		
B9R7H3              	29.57%		
B9SAD4              	28.93%		
B9RY32              	28.78%		
Bootstrap support for B9RIB9 as seed ortholog is 100%.
Bootstrap support for A3GHN7 as seed ortholog is 96%.

Group of orthologs #806. Best score 218 bits
Score difference with first non-orthologous sequence - R.communis:218 S.stipitis:218

B9RPA5              	100.00%		A3LTN2              	100.00%
Bootstrap support for B9RPA5 as seed ortholog is 100%.
Bootstrap support for A3LTN2 as seed ortholog is 100%.

Group of orthologs #807. Best score 218 bits
Score difference with first non-orthologous sequence - R.communis:218 S.stipitis:218

B9RZ76              	100.00%		A3LP82              	100.00%
Bootstrap support for B9RZ76 as seed ortholog is 100%.
Bootstrap support for A3LP82 as seed ortholog is 100%.

Group of orthologs #808. Best score 218 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:218

B9SPL2              	100.00%		A3GGL3              	100.00%
Bootstrap support for B9SPL2 as seed ortholog is 98%.
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #809. Best score 217 bits
Score difference with first non-orthologous sequence - R.communis:217 S.stipitis:217

B9SWB0              	100.00%		A3GHB0              	100.00%
B9S0L8              	94.55%		
Bootstrap support for B9SWB0 as seed ortholog is 100%.
Bootstrap support for A3GHB0 as seed ortholog is 100%.

Group of orthologs #810. Best score 217 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:43

B9SEP3              	100.00%		A3LT66              	100.00%
Bootstrap support for B9SEP3 as seed ortholog is 100%.
Bootstrap support for A3LT66 as seed ortholog is 86%.

Group of orthologs #811. Best score 216 bits
Score difference with first non-orthologous sequence - R.communis:216 S.stipitis:216

B9RWL0              	100.00%		A3LXM0              	100.00%
Bootstrap support for B9RWL0 as seed ortholog is 100%.
Bootstrap support for A3LXM0 as seed ortholog is 100%.

Group of orthologs #812. Best score 216 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:65

B9S1F6              	100.00%		A3LWZ7              	100.00%
Bootstrap support for B9S1F6 as seed ortholog is 99%.
Bootstrap support for A3LWZ7 as seed ortholog is 96%.

Group of orthologs #813. Best score 215 bits
Score difference with first non-orthologous sequence - R.communis:215 S.stipitis:215

B9RTZ4              	100.00%		A3GHK6              	100.00%
B9SXQ0              	31.56%		A3LR12              	7.13%
B9RBJ7              	29.52%		
B9SPD9              	29.01%		
Bootstrap support for B9RTZ4 as seed ortholog is 100%.
Bootstrap support for A3GHK6 as seed ortholog is 100%.

Group of orthologs #814. Best score 215 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:215

B9RK80              	100.00%		A3LS11              	100.00%
B9S5X6              	53.20%		
Bootstrap support for B9RK80 as seed ortholog is 99%.
Bootstrap support for A3LS11 as seed ortholog is 100%.

Group of orthologs #815. Best score 215 bits
Score difference with first non-orthologous sequence - R.communis:36 S.stipitis:215

B9RZX8              	100.00%		A3LY33              	100.00%
                    	       		A3LR26              	26.41%
Bootstrap support for B9RZX8 as seed ortholog is 89%.
Bootstrap support for A3LY33 as seed ortholog is 100%.

Group of orthologs #816. Best score 215 bits
Score difference with first non-orthologous sequence - R.communis:215 S.stipitis:215

B9SN16              	100.00%		A3GFT6              	100.00%
B9SSQ9              	24.68%		
Bootstrap support for B9SN16 as seed ortholog is 100%.
Bootstrap support for A3GFT6 as seed ortholog is 100%.

Group of orthologs #817. Best score 215 bits
Score difference with first non-orthologous sequence - R.communis:215 S.stipitis:215

B9RTW2              	100.00%		A3LYI7              	100.00%
Bootstrap support for B9RTW2 as seed ortholog is 100%.
Bootstrap support for A3LYI7 as seed ortholog is 100%.

Group of orthologs #818. Best score 214 bits
Score difference with first non-orthologous sequence - R.communis:214 S.stipitis:214

B9RXX3              	100.00%		A3M051              	100.00%
B9T876              	81.82%		A3LTQ9              	37.63%
B9SI05              	44.95%		A3M050              	29.38%
B9SGI4              	31.31%		A3LTQ8              	25.77%
B9RZC0              	29.29%		
Bootstrap support for B9RXX3 as seed ortholog is 100%.
Bootstrap support for A3M051 as seed ortholog is 100%.

Group of orthologs #819. Best score 214 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:214

B9SSK6              	100.00%		A3LZE5              	100.00%
B9SW28              	37.10%		A3LUT9              	39.74%
B9S0L0              	5.95%		
B9SWP8              	5.56%		
B9RH56              	5.46%		
Bootstrap support for B9SSK6 as seed ortholog is 95%.
Bootstrap support for A3LZE5 as seed ortholog is 100%.

Group of orthologs #820. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:55

B9T407              	100.00%		A3LYH8              	100.00%
B9T2W2              	59.31%		
B9SET9              	45.14%		
B9SMX5              	42.50%		
B9SVF5              	41.53%		
B9S8A4              	40.69%		
B9S4C5              	38.89%		
B9T6V8              	37.36%		
B9RVE7              	34.86%		
B9RNW5              	34.31%		
B9S8A5              	34.31%		
B9T650              	34.17%		
B9S009              	33.06%		
B9SMT0              	31.81%		
B9T2E1              	29.44%		
B9RVE0              	26.94%		
B9T8H6              	23.75%		
B9RTG4              	16.81%		
Bootstrap support for B9T407 as seed ortholog is 99%.
Bootstrap support for A3LYH8 as seed ortholog is 92%.

Group of orthologs #821. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:213 S.stipitis:213

B9RK11              	100.00%		A3LS89              	100.00%
B9RUZ6              	70.93%		
B9RUW2              	65.53%		
B9STQ3              	64.81%		
B9RZX4              	51.13%		
B9RB14              	50.50%		
B9RN85              	50.05%		
Bootstrap support for B9RK11 as seed ortholog is 100%.
Bootstrap support for A3LS89 as seed ortholog is 100%.

Group of orthologs #822. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:155 S.stipitis:213

B9RWI8              	100.00%		A3GFB5              	100.00%
B9S526              	100.00%		
Bootstrap support for B9RWI8 as seed ortholog is 100%.
Bootstrap support for B9S526 as seed ortholog is 100%.
Bootstrap support for A3GFB5 as seed ortholog is 100%.

Group of orthologs #823. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:213 S.stipitis:213

B9S8V4              	100.00%		A3LUN3              	100.00%
B9SM94              	46.91%		
Bootstrap support for B9S8V4 as seed ortholog is 100%.
Bootstrap support for A3LUN3 as seed ortholog is 100%.

Group of orthologs #824. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:213 S.stipitis:213

B9SKX8              	100.00%		A3LXC2              	100.00%
Bootstrap support for B9SKX8 as seed ortholog is 100%.
Bootstrap support for A3LXC2 as seed ortholog is 100%.

Group of orthologs #825. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:213 S.stipitis:87

B9T5X6              	100.00%		A3LR45              	100.00%
Bootstrap support for B9T5X6 as seed ortholog is 100%.
Bootstrap support for A3LR45 as seed ortholog is 95%.

Group of orthologs #826. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:49

B9T4I4              	100.00%		A3LTL8              	100.00%
Bootstrap support for B9T4I4 as seed ortholog is 96%.
Bootstrap support for A3LTL8 as seed ortholog is 78%.

Group of orthologs #827. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:213 S.stipitis:213

B9T7D2              	100.00%		A3LYF2              	100.00%
Bootstrap support for B9T7D2 as seed ortholog is 100%.
Bootstrap support for A3LYF2 as seed ortholog is 100%.

Group of orthologs #828. Best score 213 bits
Score difference with first non-orthologous sequence - R.communis:213 S.stipitis:213

B9T8H4              	100.00%		A3LZT5              	100.00%
Bootstrap support for B9T8H4 as seed ortholog is 100%.
Bootstrap support for A3LZT5 as seed ortholog is 100%.

Group of orthologs #829. Best score 212 bits
Score difference with first non-orthologous sequence - R.communis:53 S.stipitis:97

B9RPD4              	100.00%		A3GH66              	100.00%
B9RTI5              	37.21%		
Bootstrap support for B9RPD4 as seed ortholog is 99%.
Bootstrap support for A3GH66 as seed ortholog is 100%.

Group of orthologs #830. Best score 212 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:212

B9RQZ4              	100.00%		A3LS95              	100.00%
B9SU06              	21.31%		
Bootstrap support for B9RQZ4 as seed ortholog is 93%.
Bootstrap support for A3LS95 as seed ortholog is 100%.

Group of orthologs #831. Best score 212 bits
Score difference with first non-orthologous sequence - R.communis:212 S.stipitis:212

B9SNZ0              	100.00%		A3LNB9              	100.00%
Bootstrap support for B9SNZ0 as seed ortholog is 100%.
Bootstrap support for A3LNB9 as seed ortholog is 100%.

Group of orthologs #832. Best score 212 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:124

B9SRX4              	100.00%		A3LVM1              	100.00%
Bootstrap support for B9SRX4 as seed ortholog is 99%.
Bootstrap support for A3LVM1 as seed ortholog is 99%.

Group of orthologs #833. Best score 212 bits
Score difference with first non-orthologous sequence - R.communis:212 S.stipitis:212

B9T3Y5              	100.00%		A3LWH5              	100.00%
Bootstrap support for B9T3Y5 as seed ortholog is 100%.
Bootstrap support for A3LWH5 as seed ortholog is 100%.

Group of orthologs #834. Best score 211 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:93

B9RCP6              	100.00%		A3LT62              	100.00%
B9T344              	86.15%		
Bootstrap support for B9RCP6 as seed ortholog is 90%.
Bootstrap support for A3LT62 as seed ortholog is 99%.

Group of orthologs #835. Best score 211 bits
Score difference with first non-orthologous sequence - R.communis:211 S.stipitis:211

B9R9V5              	100.00%		A3GHC4              	100.00%
Bootstrap support for B9R9V5 as seed ortholog is 100%.
Bootstrap support for A3GHC4 as seed ortholog is 100%.

Group of orthologs #836. Best score 211 bits
Score difference with first non-orthologous sequence - R.communis:117 S.stipitis:211

B9RGB4              	100.00%		A3LNZ9              	100.00%
Bootstrap support for B9RGB4 as seed ortholog is 99%.
Bootstrap support for A3LNZ9 as seed ortholog is 100%.

Group of orthologs #837. Best score 211 bits
Score difference with first non-orthologous sequence - R.communis:211 S.stipitis:21

B9SCR1              	100.00%		A3LMX8              	100.00%
Bootstrap support for B9SCR1 as seed ortholog is 100%.
Bootstrap support for A3LMX8 as seed ortholog is 68%.
Alternative seed ortholog is A3LVM3 (21 bits away from this cluster)

Group of orthologs #838. Best score 210 bits
Score difference with first non-orthologous sequence - R.communis:210 S.stipitis:210

B9T1V9              	100.00%		A3LX79              	100.00%
B9RAU8              	100.00%		A3LSB0              	100.00%
B9R9G6              	100.00%		A3GID3              	100.00%
B9SJP0              	100.00%		A3LMV7              	100.00%
B9RC22              	62.60%		
B9RAU7              	52.70%		
B9R6R0              	43.56%		
B9RKH9              	38.83%		
B9SC50              	36.63%		
B9T3P5              	32.89%		
B9T1W0              	32.52%		
B9T1W4              	32.32%		
B9SPZ2              	31.66%		
B9T1W2              	31.49%		
B9T1W3              	29.40%		
B9SPZ5              	27.28%		
B9RT81              	26.51%		
B9SQH4              	22.11%		
B9RXM4              	21.32%		
B9RXM6              	19.34%		
B9RXM3              	18.54%		
B9R7N6              	16.69%		
B9SPK5              	16.56%		
B9RBV0              	14.74%		
B9SYQ3              	14.04%		
B9RZD1              	12.45%		
B9SY86              	12.06%		
B9RJS2              	11.05%		
B9T6V3              	10.99%		
B9RJS1              	10.86%		
B9RIU7              	10.60%		
B9SY89              	10.33%		
B9SY91              	9.14%		
B9T383              	9.14%		
B9T6V4              	9.14%		
B9T704              	8.91%		
B9SY87              	8.21%		
B9SY90              	8.21%		
Bootstrap support for B9T1V9 as seed ortholog is 100%.
Bootstrap support for B9RAU8 as seed ortholog is 100%.
Bootstrap support for B9R9G6 as seed ortholog is 100%.
Bootstrap support for B9SJP0 as seed ortholog is 100%.
Bootstrap support for A3LX79 as seed ortholog is 100%.
Bootstrap support for A3LSB0 as seed ortholog is 100%.
Bootstrap support for A3GID3 as seed ortholog is 100%.
Bootstrap support for A3LMV7 as seed ortholog is 100%.

Group of orthologs #839. Best score 210 bits
Score difference with first non-orthologous sequence - R.communis:210 S.stipitis:210

B9SS46              	100.00%		A3LUJ0              	100.00%
B9RGC3              	40.50%		
Bootstrap support for B9SS46 as seed ortholog is 100%.
Bootstrap support for A3LUJ0 as seed ortholog is 100%.

Group of orthologs #840. Best score 210 bits
Score difference with first non-orthologous sequence - R.communis:210 S.stipitis:210

B9RS09              	100.00%		A3LVM5              	100.00%
Bootstrap support for B9RS09 as seed ortholog is 100%.
Bootstrap support for A3LVM5 as seed ortholog is 100%.

Group of orthologs #841. Best score 210 bits
Score difference with first non-orthologous sequence - R.communis:210 S.stipitis:210

B9RWE0              	100.00%		A3LXR4              	100.00%
Bootstrap support for B9RWE0 as seed ortholog is 100%.
Bootstrap support for A3LXR4 as seed ortholog is 100%.

Group of orthologs #842. Best score 210 bits
Score difference with first non-orthologous sequence - R.communis:210 S.stipitis:102

B9S4G9              	100.00%		A3LYC9              	100.00%
Bootstrap support for B9S4G9 as seed ortholog is 100%.
Bootstrap support for A3LYC9 as seed ortholog is 99%.

Group of orthologs #843. Best score 209 bits
Score difference with first non-orthologous sequence - R.communis:209 S.stipitis:46

B9RRB6              	100.00%		A3LTH0              	100.00%
B9S1J2              	5.88%		
Bootstrap support for B9RRB6 as seed ortholog is 100%.
Bootstrap support for A3LTH0 as seed ortholog is 94%.

Group of orthologs #844. Best score 209 bits
Score difference with first non-orthologous sequence - R.communis:209 S.stipitis:209

B9RYF4              	100.00%		A3LX39              	100.00%
B9SPD6              	78.12%		
Bootstrap support for B9RYF4 as seed ortholog is 100%.
Bootstrap support for A3LX39 as seed ortholog is 100%.

Group of orthologs #845. Best score 209 bits
Score difference with first non-orthologous sequence - R.communis:95 S.stipitis:209

B9SR47              	100.00%		A3LQJ0              	100.00%
B9T4D8              	100.00%		
Bootstrap support for B9SR47 as seed ortholog is 100%.
Bootstrap support for B9T4D8 as seed ortholog is 100%.
Bootstrap support for A3LQJ0 as seed ortholog is 100%.

Group of orthologs #846. Best score 208 bits
Score difference with first non-orthologous sequence - R.communis:208 S.stipitis:208

B9RYZ1              	100.00%		A3LZW4              	100.00%
B9SBM0              	100.00%		
B9RYY9              	89.53%		
Bootstrap support for B9RYZ1 as seed ortholog is 100%.
Bootstrap support for B9SBM0 as seed ortholog is 100%.
Bootstrap support for A3LZW4 as seed ortholog is 100%.

Group of orthologs #847. Best score 208 bits
Score difference with first non-orthologous sequence - R.communis:208 S.stipitis:208

B9T3T6              	100.00%		A3LWZ3              	100.00%
B9RCY0              	40.14%		
B9RNW0              	13.46%		
Bootstrap support for B9T3T6 as seed ortholog is 100%.
Bootstrap support for A3LWZ3 as seed ortholog is 100%.

Group of orthologs #848. Best score 208 bits
Score difference with first non-orthologous sequence - R.communis:208 S.stipitis:208

B9S400              	100.00%		A3LWF6              	100.00%
B9SEC1              	94.95%		
Bootstrap support for B9S400 as seed ortholog is 100%.
Bootstrap support for A3LWF6 as seed ortholog is 100%.

Group of orthologs #849. Best score 208 bits
Score difference with first non-orthologous sequence - R.communis:208 S.stipitis:208

B9RJC4              	100.00%		A3LVS9              	100.00%
Bootstrap support for B9RJC4 as seed ortholog is 100%.
Bootstrap support for A3LVS9 as seed ortholog is 100%.

Group of orthologs #850. Best score 208 bits
Score difference with first non-orthologous sequence - R.communis:208 S.stipitis:208

B9SHF9              	100.00%		A3GHP2              	100.00%
Bootstrap support for B9SHF9 as seed ortholog is 100%.
Bootstrap support for A3GHP2 as seed ortholog is 100%.

Group of orthologs #851. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:58 S.stipitis:122

B9SI63              	100.00%		A3GGW1              	100.00%
B9SI62              	35.15%		
B9RR92              	27.32%		
B9T897              	26.39%		
Bootstrap support for B9SI63 as seed ortholog is 94%.
Bootstrap support for A3GGW1 as seed ortholog is 99%.

Group of orthologs #852. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:29 S.stipitis:207

B9RM26              	100.00%		A3GGT4              	100.00%
B9T5K8              	67.64%		
B9R7N1              	40.59%		
Bootstrap support for B9RM26 as seed ortholog is 72%.
Alternative seed ortholog is B9R7N4 (29 bits away from this cluster)
Bootstrap support for A3GGT4 as seed ortholog is 100%.

Group of orthologs #853. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:107 S.stipitis:21

B9R9I0              	100.00%		P22144              	100.00%
B9R9I1              	51.88%		
Bootstrap support for B9R9I0 as seed ortholog is 99%.
Bootstrap support for P22144 as seed ortholog is 70%.
Alternative seed ortholog is A3GIE9 (21 bits away from this cluster)

Group of orthologs #854. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:207 S.stipitis:207

B9RA39              	100.00%		A3LS37              	100.00%
Bootstrap support for B9RA39 as seed ortholog is 100%.
Bootstrap support for A3LS37 as seed ortholog is 100%.

Group of orthologs #855. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:207 S.stipitis:207

B9SN12              	100.00%		A3LNM6              	100.00%
Bootstrap support for B9SN12 as seed ortholog is 100%.
Bootstrap support for A3LNM6 as seed ortholog is 100%.

Group of orthologs #856. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:207 S.stipitis:207

B9SDN5              	100.00%		A3M052              	100.00%
Bootstrap support for B9SDN5 as seed ortholog is 100%.
Bootstrap support for A3M052 as seed ortholog is 100%.

Group of orthologs #857. Best score 207 bits
Score difference with first non-orthologous sequence - R.communis:207 S.stipitis:125

B9SWY5              	100.00%		A3LWC5              	100.00%
Bootstrap support for B9SWY5 as seed ortholog is 100%.
Bootstrap support for A3LWC5 as seed ortholog is 99%.

Group of orthologs #858. Best score 206 bits
Score difference with first non-orthologous sequence - R.communis:206 S.stipitis:206

B9T2U5              	100.00%		A3LYW7              	100.00%
B9SXB6              	100.00%		A3LY20              	100.00%
B9SDW5              	87.76%		
Bootstrap support for B9T2U5 as seed ortholog is 100%.
Bootstrap support for B9SXB6 as seed ortholog is 100%.
Bootstrap support for A3LYW7 as seed ortholog is 100%.
Bootstrap support for A3LY20 as seed ortholog is 100%.

Group of orthologs #859. Best score 206 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:83

B9T562              	100.00%		A3LW51              	100.00%
B9SNW7              	29.52%		
Bootstrap support for B9T562 as seed ortholog is 99%.
Bootstrap support for A3LW51 as seed ortholog is 96%.

Group of orthologs #860. Best score 206 bits
Score difference with first non-orthologous sequence - R.communis:2 S.stipitis:104

B9RGR3              	100.00%		A3LXL6              	100.00%
Bootstrap support for B9RGR3 as seed ortholog is 49%.
Alternative seed ortholog is B9SF78 (2 bits away from this cluster)
Bootstrap support for A3LXL6 as seed ortholog is 99%.

Group of orthologs #861. Best score 206 bits
Score difference with first non-orthologous sequence - R.communis:206 S.stipitis:206

B9SHQ6              	100.00%		A3LNA7              	100.00%
Bootstrap support for B9SHQ6 as seed ortholog is 100%.
Bootstrap support for A3LNA7 as seed ortholog is 100%.

Group of orthologs #862. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:48

B9RB96              	100.00%		A3LXZ2              	100.00%
B9RVT4              	71.95%		
B9SQ17              	61.38%		
B9S2E0              	39.02%		
B9R932              	32.93%		
B9RS94              	25.81%		
B9SU73              	7.11%		
Bootstrap support for B9RB96 as seed ortholog is 94%.
Bootstrap support for A3LXZ2 as seed ortholog is 59%.
Alternative seed ortholog is A3LSH0 (48 bits away from this cluster)

Group of orthologs #863. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:205

B9RG04              	100.00%		A3GHJ9              	100.00%
B9RGW9              	62.65%		
Bootstrap support for B9RG04 as seed ortholog is 100%.
Bootstrap support for A3GHJ9 as seed ortholog is 100%.

Group of orthologs #864. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:123

B9RK24              	100.00%		A3LZE7              	100.00%
B9S5S6              	84.55%		
Bootstrap support for B9RK24 as seed ortholog is 99%.
Bootstrap support for A3LZE7 as seed ortholog is 100%.

Group of orthologs #865. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:49

B9SSE1              	100.00%		A3LV62              	100.00%
B9S411              	46.27%		
Bootstrap support for B9SSE1 as seed ortholog is 99%.
Bootstrap support for A3LV62 as seed ortholog is 90%.

Group of orthologs #866. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:205

B9RKB6              	100.00%		A3LWP2              	100.00%
Bootstrap support for B9RKB6 as seed ortholog is 100%.
Bootstrap support for A3LWP2 as seed ortholog is 100%.

Group of orthologs #867. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:205

B9S9W7              	100.00%		A3GGP5              	100.00%
Bootstrap support for B9S9W7 as seed ortholog is 100%.
Bootstrap support for A3GGP5 as seed ortholog is 100%.

Group of orthologs #868. Best score 205 bits
Score difference with first non-orthologous sequence - R.communis:205 S.stipitis:205

B9SAT7              	100.00%		A3LZT9              	100.00%
Bootstrap support for B9SAT7 as seed ortholog is 100%.
Bootstrap support for A3LZT9 as seed ortholog is 100%.

Group of orthologs #869. Best score 204 bits
Score difference with first non-orthologous sequence - R.communis:204 S.stipitis:204

B9RMY3              	100.00%		A3LTK4              	100.00%
Bootstrap support for B9RMY3 as seed ortholog is 100%.
Bootstrap support for A3LTK4 as seed ortholog is 100%.

Group of orthologs #870. Best score 204 bits
Score difference with first non-orthologous sequence - R.communis:204 S.stipitis:204

B9S4W3              	100.00%		A3LYE8              	100.00%
Bootstrap support for B9S4W3 as seed ortholog is 100%.
Bootstrap support for A3LYE8 as seed ortholog is 100%.

Group of orthologs #871. Best score 204 bits
Score difference with first non-orthologous sequence - R.communis:204 S.stipitis:30

B9SG71              	100.00%		A3LSI3              	100.00%
Bootstrap support for B9SG71 as seed ortholog is 100%.
Bootstrap support for A3LSI3 as seed ortholog is 84%.

Group of orthologs #872. Best score 204 bits
Score difference with first non-orthologous sequence - R.communis:204 S.stipitis:204

B9SPY9              	100.00%		A3LXW8              	100.00%
Bootstrap support for B9SPY9 as seed ortholog is 100%.
Bootstrap support for A3LXW8 as seed ortholog is 100%.

Group of orthologs #873. Best score 203 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:157

B9SJ59              	100.00%		A3GGE3              	100.00%
B9SQC2              	60.43%		A3LWN7              	19.44%
B9T7D7              	45.44%		
B9RJF8              	45.34%		
B9RTL1              	44.04%		
B9RPC1              	37.99%		
B9SFG4              	36.22%		
B9RJF7              	33.80%		
B9SSK1              	28.96%		
Bootstrap support for B9SJ59 as seed ortholog is 97%.
Bootstrap support for A3GGE3 as seed ortholog is 99%.

Group of orthologs #874. Best score 203 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:203

B9S4D6              	100.00%		A3M0N6              	100.00%
B9S4D7              	100.00%		A3GFH2              	100.00%
Bootstrap support for B9S4D6 as seed ortholog is 99%.
Bootstrap support for B9S4D7 as seed ortholog is 99%.
Bootstrap support for A3M0N6 as seed ortholog is 100%.
Bootstrap support for A3GFH2 as seed ortholog is 100%.

Group of orthologs #875. Best score 203 bits
Score difference with first non-orthologous sequence - R.communis:203 S.stipitis:203

B9RKG2              	100.00%		A3GFH1              	100.00%
B9SYA5              	78.86%		
Bootstrap support for B9RKG2 as seed ortholog is 100%.
Bootstrap support for A3GFH1 as seed ortholog is 100%.

Group of orthologs #876. Best score 203 bits
Score difference with first non-orthologous sequence - R.communis:203 S.stipitis:203

B9S7K5              	100.00%		A3M014              	100.00%
                    	       		A3LRY0              	47.33%
Bootstrap support for B9S7K5 as seed ortholog is 100%.
Bootstrap support for A3M014 as seed ortholog is 100%.

Group of orthologs #877. Best score 203 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:116

B9R9W2              	100.00%		A3LYC3              	100.00%
Bootstrap support for B9R9W2 as seed ortholog is 98%.
Bootstrap support for A3LYC3 as seed ortholog is 99%.

Group of orthologs #878. Best score 203 bits
Score difference with first non-orthologous sequence - R.communis:203 S.stipitis:203

B9SA87              	100.00%		A3LYR2              	100.00%
Bootstrap support for B9SA87 as seed ortholog is 100%.
Bootstrap support for A3LYR2 as seed ortholog is 100%.

Group of orthologs #879. Best score 202 bits
Score difference with first non-orthologous sequence - R.communis:202 S.stipitis:202

B9RM24              	100.00%		A3LPM6              	100.00%
B9T7X0              	45.24%		A3LSX4              	7.91%
Bootstrap support for B9RM24 as seed ortholog is 100%.
Bootstrap support for A3LPM6 as seed ortholog is 100%.

Group of orthologs #880. Best score 202 bits
Score difference with first non-orthologous sequence - R.communis:202 S.stipitis:202

B9RJD1              	100.00%		A3LPW9              	100.00%
Bootstrap support for B9RJD1 as seed ortholog is 100%.
Bootstrap support for A3LPW9 as seed ortholog is 100%.

Group of orthologs #881. Best score 202 bits
Score difference with first non-orthologous sequence - R.communis:202 S.stipitis:202

B9S6K9              	100.00%		A3LT49              	100.00%
Bootstrap support for B9S6K9 as seed ortholog is 100%.
Bootstrap support for A3LT49 as seed ortholog is 100%.

Group of orthologs #882. Best score 201 bits
Score difference with first non-orthologous sequence - R.communis:201 S.stipitis:201

B9RVX9              	100.00%		A3LVA3              	100.00%
B9T904              	38.80%		
Bootstrap support for B9RVX9 as seed ortholog is 100%.
Bootstrap support for A3LVA3 as seed ortholog is 100%.

Group of orthologs #883. Best score 201 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:201

B9S4H6              	100.00%		A3LU64              	100.00%
Bootstrap support for B9S4H6 as seed ortholog is 98%.
Bootstrap support for A3LU64 as seed ortholog is 100%.

Group of orthologs #884. Best score 201 bits
Score difference with first non-orthologous sequence - R.communis:201 S.stipitis:201

B9SIS1              	100.00%		A3LXY4              	100.00%
Bootstrap support for B9SIS1 as seed ortholog is 100%.
Bootstrap support for A3LXY4 as seed ortholog is 100%.

Group of orthologs #885. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9SAL9              	100.00%		A3LRK1              	100.00%
B9RRQ2              	100.00%		A3GG49              	100.00%
B9SKQ7              	49.89%		
B9T807              	43.10%		
Bootstrap support for B9SAL9 as seed ortholog is 100%.
Bootstrap support for B9RRQ2 as seed ortholog is 100%.
Bootstrap support for A3LRK1 as seed ortholog is 100%.
Bootstrap support for A3GG49 as seed ortholog is 100%.

Group of orthologs #886. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9T2E6              	100.00%		A3LZE9              	100.00%
B9SH04              	36.98%		
B9SHF5              	29.95%		
Bootstrap support for B9T2E6 as seed ortholog is 100%.
Bootstrap support for A3LZE9 as seed ortholog is 100%.

Group of orthologs #887. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:200

B9RJ25              	100.00%		A3LSL2              	100.00%
B9SWB5              	5.39%		
Bootstrap support for B9RJ25 as seed ortholog is 92%.
Bootstrap support for A3LSL2 as seed ortholog is 100%.

Group of orthologs #888. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:200

B9S600              	100.00%		A3LUV9              	100.00%
B9T8E1              	61.73%		
Bootstrap support for B9S600 as seed ortholog is 93%.
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #889. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9SUI6              	100.00%		A3LQ81              	100.00%
B9RF46              	87.03%		
Bootstrap support for B9SUI6 as seed ortholog is 100%.
Bootstrap support for A3LQ81 as seed ortholog is 100%.

Group of orthologs #890. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9RB06              	100.00%		A3LN05              	100.00%
Bootstrap support for B9RB06 as seed ortholog is 100%.
Bootstrap support for A3LN05 as seed ortholog is 100%.

Group of orthologs #891. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:29 S.stipitis:44

B9RG73              	100.00%		A3LPX0              	100.00%
Bootstrap support for B9RG73 as seed ortholog is 83%.
Bootstrap support for A3LPX0 as seed ortholog is 95%.

Group of orthologs #892. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:142 S.stipitis:200

B9RRM5              	100.00%		A3LYC2              	100.00%
Bootstrap support for B9RRM5 as seed ortholog is 100%.
Bootstrap support for A3LYC2 as seed ortholog is 100%.

Group of orthologs #893. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9S4F4              	100.00%		A3LQX1              	100.00%
Bootstrap support for B9S4F4 as seed ortholog is 100%.
Bootstrap support for A3LQX1 as seed ortholog is 100%.

Group of orthologs #894. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9SZX7              	100.00%		A3LNK3              	100.00%
Bootstrap support for B9SZX7 as seed ortholog is 100%.
Bootstrap support for A3LNK3 as seed ortholog is 100%.

Group of orthologs #895. Best score 200 bits
Score difference with first non-orthologous sequence - R.communis:200 S.stipitis:200

B9T3C8              	100.00%		A3LSK0              	100.00%
Bootstrap support for B9T3C8 as seed ortholog is 100%.
Bootstrap support for A3LSK0 as seed ortholog is 100%.

Group of orthologs #896. Best score 199 bits
Score difference with first non-orthologous sequence - R.communis:155 S.stipitis:199

B9RKD1              	100.00%		A3LY66              	100.00%
B9T485              	25.89%		
Bootstrap support for B9RKD1 as seed ortholog is 100%.
Bootstrap support for A3LY66 as seed ortholog is 100%.

Group of orthologs #897. Best score 199 bits
Score difference with first non-orthologous sequence - R.communis:199 S.stipitis:199

B9RB15              	100.00%		A3LPI0              	100.00%
Bootstrap support for B9RB15 as seed ortholog is 100%.
Bootstrap support for A3LPI0 as seed ortholog is 100%.

Group of orthologs #898. Best score 199 bits
Score difference with first non-orthologous sequence - R.communis:199 S.stipitis:199

B9RK58              	100.00%		A3LS92              	100.00%
Bootstrap support for B9RK58 as seed ortholog is 100%.
Bootstrap support for A3LS92 as seed ortholog is 100%.

Group of orthologs #899. Best score 199 bits
Score difference with first non-orthologous sequence - R.communis:199 S.stipitis:199

B9S3M0              	100.00%		A3LZ09              	100.00%
Bootstrap support for B9S3M0 as seed ortholog is 100%.
Bootstrap support for A3LZ09 as seed ortholog is 100%.

Group of orthologs #900. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:4 S.stipitis:198

B9RP82              	100.00%		A3LSR0              	100.00%
B9S4Q1              	63.84%		A3LUG7              	22.07%
B9SA70              	50.55%		A3LWZ8              	8.92%
B9SXC7              	47.72%		
B9SWW9              	44.77%		
B9SZ81              	17.34%		
Bootstrap support for B9RP82 as seed ortholog is 57%.
Alternative seed ortholog is B9SI14 (4 bits away from this cluster)
Bootstrap support for A3LSR0 as seed ortholog is 100%.

Group of orthologs #901. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:198

B9REF7              	100.00%		A3LSM1              	100.00%
B9RVD0              	5.89%		
Bootstrap support for B9REF7 as seed ortholog is 92%.
Bootstrap support for A3LSM1 as seed ortholog is 100%.

Group of orthologs #902. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:198 S.stipitis:72

B9RP63              	100.00%		A3GF11              	100.00%
B9T5B2              	100.00%		
Bootstrap support for B9RP63 as seed ortholog is 100%.
Bootstrap support for B9T5B2 as seed ortholog is 100%.
Bootstrap support for A3GF11 as seed ortholog is 90%.

Group of orthologs #903. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:120 S.stipitis:198

B9R7X3              	100.00%		A3LTD1              	100.00%
Bootstrap support for B9R7X3 as seed ortholog is 99%.
Bootstrap support for A3LTD1 as seed ortholog is 100%.

Group of orthologs #904. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:198

B9RH99              	100.00%		A3LXC4              	100.00%
Bootstrap support for B9RH99 as seed ortholog is 98%.
Bootstrap support for A3LXC4 as seed ortholog is 100%.

Group of orthologs #905. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:198 S.stipitis:198

B9SKB3              	100.00%		A3LPZ2              	100.00%
Bootstrap support for B9SKB3 as seed ortholog is 100%.
Bootstrap support for A3LPZ2 as seed ortholog is 100%.

Group of orthologs #906. Best score 198 bits
Score difference with first non-orthologous sequence - R.communis:198 S.stipitis:198

B9T812              	100.00%		A3LRW1              	100.00%
Bootstrap support for B9T812 as seed ortholog is 100%.
Bootstrap support for A3LRW1 as seed ortholog is 100%.

Group of orthologs #907. Best score 197 bits
Score difference with first non-orthologous sequence - R.communis:197 S.stipitis:197

B9S1W1              	100.00%		A3LMY4              	100.00%
B9SJR7              	52.17%		
Bootstrap support for B9S1W1 as seed ortholog is 100%.
Bootstrap support for A3LMY4 as seed ortholog is 100%.

Group of orthologs #908. Best score 197 bits
Score difference with first non-orthologous sequence - R.communis:197 S.stipitis:197

B9RH03              	100.00%		A3LTT7              	100.00%
Bootstrap support for B9RH03 as seed ortholog is 100%.
Bootstrap support for A3LTT7 as seed ortholog is 100%.

Group of orthologs #909. Best score 197 bits
Score difference with first non-orthologous sequence - R.communis:6 S.stipitis:197

B9SKK5              	100.00%		A3LVN3              	100.00%
Bootstrap support for B9SKK5 as seed ortholog is 57%.
Alternative seed ortholog is B9RCT5 (6 bits away from this cluster)
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #910. Best score 196 bits
Score difference with first non-orthologous sequence - R.communis:196 S.stipitis:196

B9S226              	100.00%		A3LST7              	100.00%
Bootstrap support for B9S226 as seed ortholog is 100%.
Bootstrap support for A3LST7 as seed ortholog is 100%.

Group of orthologs #911. Best score 196 bits
Score difference with first non-orthologous sequence - R.communis:196 S.stipitis:196

B9SLM9              	100.00%		A3LMY8              	100.00%
Bootstrap support for B9SLM9 as seed ortholog is 100%.
Bootstrap support for A3LMY8 as seed ortholog is 100%.

Group of orthologs #912. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:195

B9S3D6              	100.00%		A3LV69              	100.00%
B9RBT9              	8.20%		A3GGA9              	46.45%
Bootstrap support for B9S3D6 as seed ortholog is 100%.
Bootstrap support for A3LV69 as seed ortholog is 100%.

Group of orthologs #913. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:195

B9RAV8              	100.00%		A3LQV9              	100.00%
B9SPK6              	88.50%		
Bootstrap support for B9RAV8 as seed ortholog is 100%.
Bootstrap support for A3LQV9 as seed ortholog is 100%.

Group of orthologs #914. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:195

B9SKG4              	100.00%		A3LR50              	100.00%
B9T2N6              	93.98%		
Bootstrap support for B9SKG4 as seed ortholog is 100%.
Bootstrap support for A3LR50 as seed ortholog is 100%.

Group of orthologs #915. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:195

B9RAH3              	100.00%		A3LU90              	100.00%
Bootstrap support for B9RAH3 as seed ortholog is 100%.
Bootstrap support for A3LU90 as seed ortholog is 100%.

Group of orthologs #916. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:195

B9RMH4              	100.00%		A3LVY9              	100.00%
Bootstrap support for B9RMH4 as seed ortholog is 100%.
Bootstrap support for A3LVY9 as seed ortholog is 100%.

Group of orthologs #917. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:195 S.stipitis:195

B9RY20              	100.00%		A3LQ15              	100.00%
Bootstrap support for B9RY20 as seed ortholog is 100%.
Bootstrap support for A3LQ15 as seed ortholog is 100%.

Group of orthologs #918. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:119

B9SW66              	100.00%		A3LNF3              	100.00%
Bootstrap support for B9SW66 as seed ortholog is 99%.
Bootstrap support for A3LNF3 as seed ortholog is 99%.

Group of orthologs #919. Best score 195 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:195

B9SUQ5              	100.00%		A3M0J0              	100.00%
Bootstrap support for B9SUQ5 as seed ortholog is 100%.
Bootstrap support for A3M0J0 as seed ortholog is 100%.

Group of orthologs #920. Best score 194 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:92

B9T0U7              	100.00%		A3GF79              	100.00%
B9S4H8              	37.41%		
B9RF96              	24.21%		
Bootstrap support for B9T0U7 as seed ortholog is 100%.
Bootstrap support for A3GF79 as seed ortholog is 98%.

Group of orthologs #921. Best score 194 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:194

B9RPT7              	100.00%		A3LSC6              	100.00%
Bootstrap support for B9RPT7 as seed ortholog is 100%.
Bootstrap support for A3LSC6 as seed ortholog is 100%.

Group of orthologs #922. Best score 194 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:194

B9S7H3              	100.00%		A3GIC9              	100.00%
Bootstrap support for B9S7H3 as seed ortholog is 100%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #923. Best score 194 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:194

B9S2Z0              	100.00%		A3LW77              	100.00%
Bootstrap support for B9S2Z0 as seed ortholog is 100%.
Bootstrap support for A3LW77 as seed ortholog is 100%.

Group of orthologs #924. Best score 194 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:127

B9SS17              	100.00%		A3GGL1              	100.00%
Bootstrap support for B9SS17 as seed ortholog is 100%.
Bootstrap support for A3GGL1 as seed ortholog is 99%.

Group of orthologs #925. Best score 194 bits
Score difference with first non-orthologous sequence - R.communis:194 S.stipitis:194

B9SI94              	100.00%		A3M0D6              	100.00%
Bootstrap support for B9SI94 as seed ortholog is 100%.
Bootstrap support for A3M0D6 as seed ortholog is 100%.

Group of orthologs #926. Best score 193 bits
Score difference with first non-orthologous sequence - R.communis:32 S.stipitis:39

B9T5K7              	100.00%		A3LU79              	100.00%
B9SUF1              	56.52%		
B9RIC7              	54.49%		
B9T5W7              	51.80%		
B9R931              	51.35%		
B9RC14              	7.42%		
Bootstrap support for B9T5K7 as seed ortholog is 81%.
Bootstrap support for A3LU79 as seed ortholog is 85%.

Group of orthologs #927. Best score 193 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:193

B9R7W7              	100.00%		A3LYU5              	100.00%
B9S6E1              	62.02%		
B9RH62              	37.02%		
B9SFZ5              	36.54%		
Bootstrap support for B9R7W7 as seed ortholog is 100%.
Bootstrap support for A3LYU5 as seed ortholog is 100%.

Group of orthologs #928. Best score 193 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:6

B9RG53              	100.00%		A3GHK3              	100.00%
B9RJ32              	100.00%		
B9R843              	95.16%		
Bootstrap support for B9RG53 as seed ortholog is 100%.
Bootstrap support for B9RJ32 as seed ortholog is 100%.
Bootstrap support for A3GHK3 as seed ortholog is 60%.
Alternative seed ortholog is A3LPC4 (6 bits away from this cluster)

Group of orthologs #929. Best score 193 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:193

B9RT37              	100.00%		A3LT92              	100.00%
Bootstrap support for B9RT37 as seed ortholog is 100%.
Bootstrap support for A3LT92 as seed ortholog is 100%.

Group of orthologs #930. Best score 193 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:193

B9SPS6              	100.00%		A3LNY2              	100.00%
Bootstrap support for B9SPS6 as seed ortholog is 100%.
Bootstrap support for A3LNY2 as seed ortholog is 100%.

Group of orthologs #931. Best score 193 bits
Score difference with first non-orthologous sequence - R.communis:193 S.stipitis:193

B9SWY3              	100.00%		A3LPI6              	100.00%
Bootstrap support for B9SWY3 as seed ortholog is 100%.
Bootstrap support for A3LPI6 as seed ortholog is 100%.

Group of orthologs #932. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:25 S.stipitis:192

B9RA22              	100.00%		A3LSY7              	100.00%
B9SIP2              	100.00%		A3LZT0              	100.00%
B9SKF8              	67.42%		
B9SIN8              	15.15%		
B9SIN7              	14.48%		
B9SIP1              	7.58%		
Bootstrap support for B9RA22 as seed ortholog is 73%.
Alternative seed ortholog is B9RYK8 (25 bits away from this cluster)
Bootstrap support for B9SIP2 as seed ortholog is 57%.
Alternative seed ortholog is B9RYK8 (25 bits away from this cluster)
Bootstrap support for A3LSY7 as seed ortholog is 100%.
Bootstrap support for A3LZT0 as seed ortholog is 100%.

Group of orthologs #933. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:192

B9RJ27              	100.00%		A3LN97              	100.00%
Bootstrap support for B9RJ27 as seed ortholog is 100%.
Bootstrap support for A3LN97 as seed ortholog is 100%.

Group of orthologs #934. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:192

B9RC02              	100.00%		A3LXD4              	100.00%
Bootstrap support for B9RC02 as seed ortholog is 100%.
Bootstrap support for A3LXD4 as seed ortholog is 100%.

Group of orthologs #935. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:131

B9RLP0              	100.00%		A3LQT9              	100.00%
Bootstrap support for B9RLP0 as seed ortholog is 100%.
Bootstrap support for A3LQT9 as seed ortholog is 99%.

Group of orthologs #936. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:192

B9RYB6              	100.00%		A3GF98              	100.00%
Bootstrap support for B9RYB6 as seed ortholog is 100%.
Bootstrap support for A3GF98 as seed ortholog is 100%.

Group of orthologs #937. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:192

B9RP04              	100.00%		A3LWQ7              	100.00%
Bootstrap support for B9RP04 as seed ortholog is 100%.
Bootstrap support for A3LWQ7 as seed ortholog is 100%.

Group of orthologs #938. Best score 192 bits
Score difference with first non-orthologous sequence - R.communis:192 S.stipitis:192

B9SSM1              	100.00%		A3LNC2              	100.00%
Bootstrap support for B9SSM1 as seed ortholog is 100%.
Bootstrap support for A3LNC2 as seed ortholog is 100%.

Group of orthologs #939. Best score 191 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:148

B9TBD3              	100.00%		A3LX21              	100.00%
B9T920              	22.17%		
B9TFR1              	5.39%		
Bootstrap support for B9TBD3 as seed ortholog is 100%.
Bootstrap support for A3LX21 as seed ortholog is 99%.

Group of orthologs #940. Best score 191 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:191

B9RGY9              	100.00%		A3GF89              	100.00%
Bootstrap support for B9RGY9 as seed ortholog is 76%.
Bootstrap support for A3GF89 as seed ortholog is 100%.

Group of orthologs #941. Best score 191 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:191

B9RSJ0              	100.00%		A3GET4              	100.00%
Bootstrap support for B9RSJ0 as seed ortholog is 100%.
Bootstrap support for A3GET4 as seed ortholog is 100%.

Group of orthologs #942. Best score 191 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:75

B9RT83              	100.00%		A3GGU8              	100.00%
Bootstrap support for B9RT83 as seed ortholog is 99%.
Bootstrap support for A3GGU8 as seed ortholog is 99%.

Group of orthologs #943. Best score 191 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:191

B9S2I7              	100.00%		A3GGL6              	100.00%
Bootstrap support for B9S2I7 as seed ortholog is 100%.
Bootstrap support for A3GGL6 as seed ortholog is 100%.

Group of orthologs #944. Best score 191 bits
Score difference with first non-orthologous sequence - R.communis:191 S.stipitis:191

B9SEQ9              	100.00%		A3GHK4              	100.00%
Bootstrap support for B9SEQ9 as seed ortholog is 100%.
Bootstrap support for A3GHK4 as seed ortholog is 100%.

Group of orthologs #945. Best score 190 bits
Score difference with first non-orthologous sequence - R.communis:190 S.stipitis:190

B9S0B0              	100.00%		A3LNV9              	100.00%
                    	       		A3LYG9              	81.86%
                    	       		A3LRH0              	10.96%
Bootstrap support for B9S0B0 as seed ortholog is 100%.
Bootstrap support for A3LNV9 as seed ortholog is 100%.

Group of orthologs #946. Best score 190 bits
Score difference with first non-orthologous sequence - R.communis:190 S.stipitis:190

B9RG51              	100.00%		A3LND3              	100.00%
B9T677              	42.80%		
Bootstrap support for B9RG51 as seed ortholog is 100%.
Bootstrap support for A3LND3 as seed ortholog is 100%.

Group of orthologs #947. Best score 190 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:51

B9RKG0              	100.00%		A3LPZ8              	100.00%
B9S641              	8.62%		
Bootstrap support for B9RKG0 as seed ortholog is 94%.
Bootstrap support for A3LPZ8 as seed ortholog is 93%.

Group of orthologs #948. Best score 190 bits
Score difference with first non-orthologous sequence - R.communis:190 S.stipitis:190

B9SD55              	100.00%		A3LN72              	100.00%
Bootstrap support for B9SD55 as seed ortholog is 100%.
Bootstrap support for A3LN72 as seed ortholog is 100%.

Group of orthologs #949. Best score 190 bits
Score difference with first non-orthologous sequence - R.communis:190 S.stipitis:190

B9SCM9              	100.00%		A3LRT6              	100.00%
Bootstrap support for B9SCM9 as seed ortholog is 100%.
Bootstrap support for A3LRT6 as seed ortholog is 100%.

Group of orthologs #950. Best score 190 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:141

B9SVY3              	100.00%		A3LQ08              	100.00%
Bootstrap support for B9SVY3 as seed ortholog is 99%.
Bootstrap support for A3LQ08 as seed ortholog is 100%.

Group of orthologs #951. Best score 189 bits
Score difference with first non-orthologous sequence - R.communis:21 S.stipitis:189

B9S3Z3              	100.00%		A3LXE7              	100.00%
B9REZ0              	38.10%		
B9S3Z2              	30.95%		
Bootstrap support for B9S3Z3 as seed ortholog is 95%.
Bootstrap support for A3LXE7 as seed ortholog is 100%.

Group of orthologs #952. Best score 189 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:189

B9SXV4              	100.00%		A3LZW5              	100.00%
B9SUH3              	35.77%		
B9S2Y4              	13.35%		
Bootstrap support for B9SXV4 as seed ortholog is 99%.
Bootstrap support for A3LZW5 as seed ortholog is 100%.

Group of orthologs #953. Best score 189 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:189

B9T6E8              	100.00%		A3LPX6              	100.00%
Bootstrap support for B9T6E8 as seed ortholog is 95%.
Bootstrap support for A3LPX6 as seed ortholog is 100%.

Group of orthologs #954. Best score 188 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:188

B9RLU3              	100.00%		A3LV26              	100.00%
B9STQ5              	100.00%		
Bootstrap support for B9RLU3 as seed ortholog is 100%.
Bootstrap support for B9STQ5 as seed ortholog is 100%.
Bootstrap support for A3LV26 as seed ortholog is 100%.

Group of orthologs #955. Best score 188 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:188

B9RSG5              	100.00%		A3LXS8              	100.00%
                    	       		A3LP77              	16.33%
Bootstrap support for B9RSG5 as seed ortholog is 100%.
Bootstrap support for A3LXS8 as seed ortholog is 100%.

Group of orthologs #956. Best score 188 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:188

B9S046              	100.00%		A3LVQ8              	100.00%
Bootstrap support for B9S046 as seed ortholog is 100%.
Bootstrap support for A3LVQ8 as seed ortholog is 100%.

Group of orthologs #957. Best score 188 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:188

B9SA27              	100.00%		A3LUN1              	100.00%
Bootstrap support for B9SA27 as seed ortholog is 100%.
Bootstrap support for A3LUN1 as seed ortholog is 100%.

Group of orthologs #958. Best score 188 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:188

B9SPN4              	100.00%		A3GFK8              	100.00%
Bootstrap support for B9SPN4 as seed ortholog is 100%.
Bootstrap support for A3GFK8 as seed ortholog is 100%.

Group of orthologs #959. Best score 188 bits
Score difference with first non-orthologous sequence - R.communis:188 S.stipitis:188

B9SJ62              	100.00%		A3LS30              	100.00%
Bootstrap support for B9SJ62 as seed ortholog is 100%.
Bootstrap support for A3LS30 as seed ortholog is 100%.

Group of orthologs #960. Best score 187 bits
Score difference with first non-orthologous sequence - R.communis:187 S.stipitis:187

B9RM79              	100.00%		A3GGJ6              	100.00%
Bootstrap support for B9RM79 as seed ortholog is 100%.
Bootstrap support for A3GGJ6 as seed ortholog is 100%.

Group of orthologs #961. Best score 187 bits
Score difference with first non-orthologous sequence - R.communis:187 S.stipitis:187

B9RM59              	100.00%		A3LZV2              	100.00%
Bootstrap support for B9RM59 as seed ortholog is 100%.
Bootstrap support for A3LZV2 as seed ortholog is 100%.

Group of orthologs #962. Best score 186 bits
Score difference with first non-orthologous sequence - R.communis:186 S.stipitis:186

B9RDZ6              	100.00%		A3LWT6              	100.00%
B9SY59              	79.43%		A3GGW2              	27.60%
B9T4Z7              	70.69%		A3LZP5              	24.84%
B9RDZ5              	65.72%		
B9RIP3              	55.32%		
B9RIP2              	45.63%		
B9RE02              	8.98%		
Bootstrap support for B9RDZ6 as seed ortholog is 100%.
Bootstrap support for A3LWT6 as seed ortholog is 100%.

Group of orthologs #963. Best score 186 bits
Score difference with first non-orthologous sequence - R.communis:186 S.stipitis:78

B9T828              	100.00%		A3LXV4              	100.00%
B9RM86              	10.67%		
Bootstrap support for B9T828 as seed ortholog is 100%.
Bootstrap support for A3LXV4 as seed ortholog is 99%.

Group of orthologs #964. Best score 186 bits
Score difference with first non-orthologous sequence - R.communis:95 S.stipitis:112

B9T817              	100.00%		A3LZ35              	100.00%
Bootstrap support for B9T817 as seed ortholog is 99%.
Bootstrap support for A3LZ35 as seed ortholog is 99%.

Group of orthologs #965. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:185

B9RAE1              	100.00%		A3GHZ9              	100.00%
B9SPU3              	47.35%		
Bootstrap support for B9RAE1 as seed ortholog is 100%.
Bootstrap support for A3GHZ9 as seed ortholog is 100%.

Group of orthologs #966. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:185

B9RJF9              	100.00%		A3LMT2              	100.00%
B9TGS0              	5.88%		
Bootstrap support for B9RJF9 as seed ortholog is 100%.
Bootstrap support for A3LMT2 as seed ortholog is 100%.

Group of orthologs #967. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:185

B9RTE6              	100.00%		A3GHH8              	100.00%
B9S4T9              	89.83%		
Bootstrap support for B9RTE6 as seed ortholog is 100%.
Bootstrap support for A3GHH8 as seed ortholog is 100%.

Group of orthologs #968. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:185

B9RHR3              	100.00%		A3LYF6              	100.00%
B9RRU8              	39.67%		
Bootstrap support for B9RHR3 as seed ortholog is 98%.
Bootstrap support for A3LYF6 as seed ortholog is 100%.

Group of orthologs #969. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:78

B9RRI4              	100.00%		A3LTX0              	100.00%
B9SL02              	100.00%		
Bootstrap support for B9RRI4 as seed ortholog is 97%.
Bootstrap support for B9SL02 as seed ortholog is 96%.
Bootstrap support for A3LTX0 as seed ortholog is 97%.

Group of orthologs #970. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:185

B9SFN3              	100.00%		A3LX65              	100.00%
B9RHH3              	91.07%		
Bootstrap support for B9SFN3 as seed ortholog is 100%.
Bootstrap support for A3LX65 as seed ortholog is 100%.

Group of orthologs #971. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:185

B9S4S0              	100.00%		A3LMX0              	100.00%
Bootstrap support for B9S4S0 as seed ortholog is 100%.
Bootstrap support for A3LMX0 as seed ortholog is 100%.

Group of orthologs #972. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:185 S.stipitis:185

B9S078              	100.00%		A3LTE6              	100.00%
Bootstrap support for B9S078 as seed ortholog is 100%.
Bootstrap support for A3LTE6 as seed ortholog is 100%.

Group of orthologs #973. Best score 185 bits
Score difference with first non-orthologous sequence - R.communis:46 S.stipitis:71

B9T3L1              	100.00%		A3LSJ2              	100.00%
Bootstrap support for B9T3L1 as seed ortholog is 86%.
Bootstrap support for A3LSJ2 as seed ortholog is 93%.

Group of orthologs #974. Best score 184 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:93

B9SPT6              	100.00%		A3LPW5              	100.00%
B9ST80              	56.15%		
B9RR73              	45.33%		
Bootstrap support for B9SPT6 as seed ortholog is 98%.
Bootstrap support for A3LPW5 as seed ortholog is 99%.

Group of orthologs #975. Best score 184 bits
Score difference with first non-orthologous sequence - R.communis:184 S.stipitis:184

B9SX45              	100.00%		A3LSV9              	100.00%
Bootstrap support for B9SX45 as seed ortholog is 100%.
Bootstrap support for A3LSV9 as seed ortholog is 100%.

Group of orthologs #976. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:20 S.stipitis:183

B9SG57              	100.00%		A3LV20              	100.00%
                    	       		A3LRD8              	39.88%
                    	       		A3LV21              	27.66%
                    	       		A3LU73              	23.75%
                    	       		A3LXG2              	10.42%
                    	       		A3GGH1              	9.22%
                    	       		A3LVX6              	6.21%
Bootstrap support for B9SG57 as seed ortholog is 44%.
Alternative seed ortholog is B9SN10 (20 bits away from this cluster)
Bootstrap support for A3LV20 as seed ortholog is 100%.

Group of orthologs #977. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:183

B9SKJ5              	100.00%		A3LXK5              	100.00%
B9RD44              	27.07%		
B9RNV7              	22.50%		
B9SXD3              	21.83%		
B9SKX9              	18.10%		
B9SKV9              	14.55%		
Bootstrap support for B9SKJ5 as seed ortholog is 74%.
Alternative seed ortholog is B9TBM0 (18 bits away from this cluster)
Bootstrap support for A3LXK5 as seed ortholog is 100%.

Group of orthologs #978. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:183

B9SX80              	100.00%		A3LNY1              	100.00%
B9R6U0              	45.36%		A3LVU4              	68.37%
B9R6T8              	39.47%		
B9S7U2              	36.69%		
Bootstrap support for B9SX80 as seed ortholog is 99%.
Bootstrap support for A3LNY1 as seed ortholog is 100%.

Group of orthologs #979. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:49

B9SXH6              	100.00%		A3LXQ4              	100.00%
B9RJV4              	75.56%		
B9S9F1              	72.87%		
B9S9F2              	42.83%		
B9T1E7              	5.61%		
Bootstrap support for B9SXH6 as seed ortholog is 91%.
Bootstrap support for A3LXQ4 as seed ortholog is 89%.

Group of orthologs #980. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:183 S.stipitis:123

B9RSK8              	100.00%		A3LRM3              	100.00%
B9SSZ6              	60.78%		
B9RGR1              	39.93%		
Bootstrap support for B9RSK8 as seed ortholog is 100%.
Bootstrap support for A3LRM3 as seed ortholog is 67%.
Alternative seed ortholog is A3LZ40 (123 bits away from this cluster)

Group of orthologs #981. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:183

B9RGQ9              	100.00%		A3GHX2              	100.00%
B9RSR7              	59.22%		
Bootstrap support for B9RGQ9 as seed ortholog is 86%.
Bootstrap support for A3GHX2 as seed ortholog is 100%.

Group of orthologs #982. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:89

B9RYT1              	100.00%		A3LT13              	100.00%
B9STK0              	10.97%		
Bootstrap support for B9RYT1 as seed ortholog is 91%.
Bootstrap support for A3LT13 as seed ortholog is 97%.

Group of orthologs #983. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:114

B9SGH9              	100.00%		A3LNI6              	100.00%
B9R7Q3              	12.44%		
Bootstrap support for B9SGH9 as seed ortholog is 99%.
Bootstrap support for A3LNI6 as seed ortholog is 99%.

Group of orthologs #984. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:183 S.stipitis:183

B9RII3              	100.00%		A3LZB0              	100.00%
Bootstrap support for B9RII3 as seed ortholog is 100%.
Bootstrap support for A3LZB0 as seed ortholog is 100%.

Group of orthologs #985. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:183 S.stipitis:183

B9SA71              	100.00%		A3LP31              	100.00%
Bootstrap support for B9SA71 as seed ortholog is 100%.
Bootstrap support for A3LP31 as seed ortholog is 100%.

Group of orthologs #986. Best score 183 bits
Score difference with first non-orthologous sequence - R.communis:183 S.stipitis:183

B9T655              	100.00%		A3LTX4              	100.00%
Bootstrap support for B9T655 as seed ortholog is 100%.
Bootstrap support for A3LTX4 as seed ortholog is 100%.

Group of orthologs #987. Best score 182 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:182

B9REW1              	100.00%		A3LQE7              	100.00%
Bootstrap support for B9REW1 as seed ortholog is 99%.
Bootstrap support for A3LQE7 as seed ortholog is 100%.

Group of orthologs #988. Best score 182 bits
Score difference with first non-orthologous sequence - R.communis:182 S.stipitis:182

B9RVY3              	100.00%		A3GHD1              	100.00%
Bootstrap support for B9RVY3 as seed ortholog is 100%.
Bootstrap support for A3GHD1 as seed ortholog is 100%.

Group of orthologs #989. Best score 182 bits
Score difference with first non-orthologous sequence - R.communis:182 S.stipitis:182

B9RUL9              	100.00%		A3LXT1              	100.00%
Bootstrap support for B9RUL9 as seed ortholog is 100%.
Bootstrap support for A3LXT1 as seed ortholog is 100%.

Group of orthologs #990. Best score 182 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:182

B9SE42              	100.00%		A3GFW2              	100.00%
Bootstrap support for B9SE42 as seed ortholog is 99%.
Bootstrap support for A3GFW2 as seed ortholog is 100%.

Group of orthologs #991. Best score 182 bits
Score difference with first non-orthologous sequence - R.communis:182 S.stipitis:182

B9S2M9              	100.00%		A3LWX8              	100.00%
Bootstrap support for B9S2M9 as seed ortholog is 100%.
Bootstrap support for A3LWX8 as seed ortholog is 100%.

Group of orthologs #992. Best score 181 bits
Score difference with first non-orthologous sequence - R.communis:53 S.stipitis:181

B9SIT8              	100.00%		A3GFU8              	100.00%
B9RD73              	51.61%		
B9SV86              	48.39%		
B9SV85              	43.55%		
B9RXK4              	41.94%		
Bootstrap support for B9SIT8 as seed ortholog is 99%.
Bootstrap support for A3GFU8 as seed ortholog is 100%.

Group of orthologs #993. Best score 181 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:181

B9SKI0              	100.00%		A3LXB0              	100.00%
B9S6Y7              	32.90%		
B9R9Q5              	23.81%		
Bootstrap support for B9SKI0 as seed ortholog is 99%.
Bootstrap support for A3LXB0 as seed ortholog is 100%.

Group of orthologs #994. Best score 181 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:181

B9RIF2              	100.00%		A3LYP5              	100.00%
B9T8A1              	86.00%		
Bootstrap support for B9RIF2 as seed ortholog is 99%.
Bootstrap support for A3LYP5 as seed ortholog is 100%.

Group of orthologs #995. Best score 181 bits
Score difference with first non-orthologous sequence - R.communis:181 S.stipitis:181

B9SI57              	100.00%		A3LP89              	100.00%
Bootstrap support for B9SI57 as seed ortholog is 100%.
Bootstrap support for A3LP89 as seed ortholog is 100%.

Group of orthologs #996. Best score 181 bits
Score difference with first non-orthologous sequence - R.communis:181 S.stipitis:181

B9T3N9              	100.00%		A3LP86              	100.00%
Bootstrap support for B9T3N9 as seed ortholog is 100%.
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #997. Best score 180 bits
Score difference with first non-orthologous sequence - R.communis:58 S.stipitis:180

B9S6U3              	100.00%		A3GHZ7              	100.00%
B9T1V4              	35.26%		A3LQN4              	5.84%
B9T1V5              	33.22%		
B9T1V2              	30.32%		
Bootstrap support for B9S6U3 as seed ortholog is 96%.
Bootstrap support for A3GHZ7 as seed ortholog is 100%.

Group of orthologs #998. Best score 180 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:9

B9RKS6              	100.00%		A3LZ12              	100.00%
B9RRP3              	31.02%		
B9RQQ7              	18.52%		
B9SUD6              	10.19%		
Bootstrap support for B9RKS6 as seed ortholog is 91%.
Bootstrap support for A3LZ12 as seed ortholog is 66%.
Alternative seed ortholog is A3GGS8 (9 bits away from this cluster)

Group of orthologs #999. Best score 180 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:180

B9RKJ7              	100.00%		A3LUI8              	100.00%
Bootstrap support for B9RKJ7 as seed ortholog is 99%.
Bootstrap support for A3LUI8 as seed ortholog is 100%.

Group of orthologs #1000. Best score 180 bits
Score difference with first non-orthologous sequence - R.communis:180 S.stipitis:180

B9RWM8              	100.00%		A3LVK6              	100.00%
Bootstrap support for B9RWM8 as seed ortholog is 100%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #1001. Best score 180 bits
Score difference with first non-orthologous sequence - R.communis:20 S.stipitis:180

B9SJ52              	100.00%		A3LWF4              	100.00%
Bootstrap support for B9SJ52 as seed ortholog is 66%.
Alternative seed ortholog is B9SQY4 (20 bits away from this cluster)
Bootstrap support for A3LWF4 as seed ortholog is 100%.

Group of orthologs #1002. Best score 180 bits
Score difference with first non-orthologous sequence - R.communis:180 S.stipitis:180

B9T798              	100.00%		A3LQB2              	100.00%
Bootstrap support for B9T798 as seed ortholog is 100%.
Bootstrap support for A3LQB2 as seed ortholog is 100%.

Group of orthologs #1003. Best score 179 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:179

B9RH89              	100.00%		A3LQA4              	100.00%
B9RPH5              	95.65%		
B9SLN5              	78.26%		
Bootstrap support for B9RH89 as seed ortholog is 100%.
Bootstrap support for A3LQA4 as seed ortholog is 100%.

Group of orthologs #1004. Best score 179 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:179

B9REV1              	100.00%		A3GI05              	100.00%
Bootstrap support for B9REV1 as seed ortholog is 100%.
Bootstrap support for A3GI05 as seed ortholog is 100%.

Group of orthologs #1005. Best score 179 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:179

B9SM91              	100.00%		A3GGE4              	100.00%
Bootstrap support for B9SM91 as seed ortholog is 100%.
Bootstrap support for A3GGE4 as seed ortholog is 100%.

Group of orthologs #1006. Best score 179 bits
Score difference with first non-orthologous sequence - R.communis:179 S.stipitis:179

B9SKL5              	100.00%		A3LP06              	100.00%
Bootstrap support for B9SKL5 as seed ortholog is 100%.
Bootstrap support for A3LP06 as seed ortholog is 100%.

Group of orthologs #1007. Best score 178 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:178

B9SG91              	100.00%		A3LPQ2              	100.00%
B9RYA3              	66.11%		
B9R765              	63.19%		
Bootstrap support for B9SG91 as seed ortholog is 97%.
Bootstrap support for A3LPQ2 as seed ortholog is 100%.

Group of orthologs #1008. Best score 178 bits
Score difference with first non-orthologous sequence - R.communis:178 S.stipitis:178

B9STZ3              	100.00%		A3GFA1              	100.00%
B9STL6              	29.97%		A3GH12              	14.92%
Bootstrap support for B9STZ3 as seed ortholog is 100%.
Bootstrap support for A3GFA1 as seed ortholog is 100%.

Group of orthologs #1009. Best score 178 bits
Score difference with first non-orthologous sequence - R.communis:67 S.stipitis:30

B9SR14              	100.00%		A3LS38              	100.00%
B9SZE6              	55.88%		
Bootstrap support for B9SR14 as seed ortholog is 99%.
Bootstrap support for A3LS38 as seed ortholog is 87%.

Group of orthologs #1010. Best score 178 bits
Score difference with first non-orthologous sequence - R.communis:178 S.stipitis:178

B9S2M8              	100.00%		A3GGL0              	100.00%
Bootstrap support for B9S2M8 as seed ortholog is 100%.
Bootstrap support for A3GGL0 as seed ortholog is 100%.

Group of orthologs #1011. Best score 178 bits
Score difference with first non-orthologous sequence - R.communis:178 S.stipitis:178

B9S623              	100.00%		A3LYA6              	100.00%
Bootstrap support for B9S623 as seed ortholog is 100%.
Bootstrap support for A3LYA6 as seed ortholog is 100%.

Group of orthologs #1012. Best score 178 bits
Score difference with first non-orthologous sequence - R.communis:178 S.stipitis:126

B9T6W4              	100.00%		A3GFE3              	100.00%
Bootstrap support for B9T6W4 as seed ortholog is 100%.
Bootstrap support for A3GFE3 as seed ortholog is 99%.

Group of orthologs #1013. Best score 177 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:177

B9T852              	100.00%		A3LQQ1              	100.00%
B9SGR9              	32.29%		
Bootstrap support for B9T852 as seed ortholog is 97%.
Bootstrap support for A3LQQ1 as seed ortholog is 100%.

Group of orthologs #1014. Best score 177 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:37

B9RK49              	100.00%		A3M0B5              	100.00%
Bootstrap support for B9RK49 as seed ortholog is 97%.
Bootstrap support for A3M0B5 as seed ortholog is 86%.

Group of orthologs #1015. Best score 177 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:177

B9S3C9              	100.00%		A3GFG7              	100.00%
Bootstrap support for B9S3C9 as seed ortholog is 100%.
Bootstrap support for A3GFG7 as seed ortholog is 100%.

Group of orthologs #1016. Best score 177 bits
Score difference with first non-orthologous sequence - R.communis:177 S.stipitis:177

B9SXX8              	100.00%		A3LR09              	100.00%
Bootstrap support for B9SXX8 as seed ortholog is 100%.
Bootstrap support for A3LR09 as seed ortholog is 100%.

Group of orthologs #1017. Best score 177 bits
Score difference with first non-orthologous sequence - R.communis:177 S.stipitis:177

B9T2W1              	100.00%		A3LU40              	100.00%
Bootstrap support for B9T2W1 as seed ortholog is 100%.
Bootstrap support for A3LU40 as seed ortholog is 100%.

Group of orthologs #1018. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:70 S.stipitis:176

B9T301              	100.00%		A3LXE6              	100.00%
B9T761              	100.00%		A3LZZ1              	100.00%
B9T302              	93.94%		
B9SCL5              	73.26%		
B9T4D7              	49.49%		
Bootstrap support for B9T301 as seed ortholog is 99%.
Bootstrap support for B9T761 as seed ortholog is 100%.
Bootstrap support for A3LXE6 as seed ortholog is 100%.
Bootstrap support for A3LZZ1 as seed ortholog is 100%.

Group of orthologs #1019. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:176

B9SR77              	100.00%		A3GGB0              	100.00%
B9S129              	88.54%		
Bootstrap support for B9SR77 as seed ortholog is 100%.
Bootstrap support for A3GGB0 as seed ortholog is 100%.

Group of orthologs #1020. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:53 S.stipitis:176

B9RA92              	100.00%		A3LRK3              	100.00%
Bootstrap support for B9RA92 as seed ortholog is 96%.
Bootstrap support for A3LRK3 as seed ortholog is 100%.

Group of orthologs #1021. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:46 S.stipitis:176

B9RFT2              	100.00%		A3LYQ8              	100.00%
Bootstrap support for B9RFT2 as seed ortholog is 83%.
Bootstrap support for A3LYQ8 as seed ortholog is 100%.

Group of orthologs #1022. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:176

B9S900              	100.00%		A3LQ64              	100.00%
Bootstrap support for B9S900 as seed ortholog is 100%.
Bootstrap support for A3LQ64 as seed ortholog is 100%.

Group of orthologs #1023. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:176

B9SKK7              	100.00%		A3LSM2              	100.00%
Bootstrap support for B9SKK7 as seed ortholog is 100%.
Bootstrap support for A3LSM2 as seed ortholog is 100%.

Group of orthologs #1024. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:176

B9SIU2              	100.00%		A3LXR8              	100.00%
Bootstrap support for B9SIU2 as seed ortholog is 96%.
Bootstrap support for A3LXR8 as seed ortholog is 100%.

Group of orthologs #1025. Best score 176 bits
Score difference with first non-orthologous sequence - R.communis:176 S.stipitis:176

B9SXD8              	100.00%		A3LX48              	100.00%
Bootstrap support for B9SXD8 as seed ortholog is 100%.
Bootstrap support for A3LX48 as seed ortholog is 100%.

Group of orthologs #1026. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9SVY2              	100.00%		A3LZZ5              	100.00%
B9SVB4              	59.68%		
B9S0K9              	59.68%		
B9R872              	58.50%		
B9R8K0              	53.36%		
B9SIB8              	49.80%		
B9RVQ1              	45.06%		
B9RQS0              	41.50%		
Bootstrap support for B9SVY2 as seed ortholog is 100%.
Bootstrap support for A3LZZ5 as seed ortholog is 100%.

Group of orthologs #1027. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9SQS5              	100.00%		A3LS85              	100.00%
B9SQS6              	100.00%		A3GH13              	100.00%
Bootstrap support for B9SQS5 as seed ortholog is 100%.
Bootstrap support for B9SQS6 as seed ortholog is 100%.
Bootstrap support for A3LS85 as seed ortholog is 100%.
Bootstrap support for A3GH13 as seed ortholog is 100%.

Group of orthologs #1028. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9RRC3              	100.00%		A3LWD9              	100.00%
Bootstrap support for B9RRC3 as seed ortholog is 100%.
Bootstrap support for A3LWD9 as seed ortholog is 100%.

Group of orthologs #1029. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9S0R4              	100.00%		A3GIE0              	100.00%
Bootstrap support for B9S0R4 as seed ortholog is 100%.
Bootstrap support for A3GIE0 as seed ortholog is 100%.

Group of orthologs #1030. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9S2W7              	100.00%		A3LPJ5              	100.00%
Bootstrap support for B9S2W7 as seed ortholog is 100%.
Bootstrap support for A3LPJ5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9S6V5              	100.00%		A3GGV6              	100.00%
Bootstrap support for B9S6V5 as seed ortholog is 100%.
Bootstrap support for A3GGV6 as seed ortholog is 100%.

Group of orthologs #1032. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9SAR5              	100.00%		A3LS21              	100.00%
Bootstrap support for B9SAR5 as seed ortholog is 100%.
Bootstrap support for A3LS21 as seed ortholog is 100%.

Group of orthologs #1033. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9SBY5              	100.00%		A3LX25              	100.00%
Bootstrap support for B9SBY5 as seed ortholog is 100%.
Bootstrap support for A3LX25 as seed ortholog is 100%.

Group of orthologs #1034. Best score 175 bits
Score difference with first non-orthologous sequence - R.communis:175 S.stipitis:175

B9SYR1              	100.00%		A3LVV0              	100.00%
Bootstrap support for B9SYR1 as seed ortholog is 100%.
Bootstrap support for A3LVV0 as seed ortholog is 100%.

Group of orthologs #1035. Best score 174 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:174

B9RAG3              	100.00%		A3LQG1              	100.00%
Bootstrap support for B9RAG3 as seed ortholog is 100%.
Bootstrap support for A3LQG1 as seed ortholog is 100%.

Group of orthologs #1036. Best score 174 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:174

B9RUI4              	100.00%		A3LZS2              	100.00%
Bootstrap support for B9RUI4 as seed ortholog is 100%.
Bootstrap support for A3LZS2 as seed ortholog is 100%.

Group of orthologs #1037. Best score 174 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:174

B9SSH7              	100.00%		A3LW99              	100.00%
Bootstrap support for B9SSH7 as seed ortholog is 100%.
Bootstrap support for A3LW99 as seed ortholog is 100%.

Group of orthologs #1038. Best score 174 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:174

B9T0W1              	100.00%		A3LTB7              	100.00%
Bootstrap support for B9T0W1 as seed ortholog is 100%.
Bootstrap support for A3LTB7 as seed ortholog is 100%.

Group of orthologs #1039. Best score 174 bits
Score difference with first non-orthologous sequence - R.communis:174 S.stipitis:174

B9TAU0              	100.00%		A3M007              	100.00%
Bootstrap support for B9TAU0 as seed ortholog is 100%.
Bootstrap support for A3M007 as seed ortholog is 100%.

Group of orthologs #1040. Best score 173 bits
Score difference with first non-orthologous sequence - R.communis:173 S.stipitis:97

B9SQU0              	100.00%		A3LZK6              	100.00%
Bootstrap support for B9SQU0 as seed ortholog is 100%.
Bootstrap support for A3LZK6 as seed ortholog is 99%.

Group of orthologs #1041. Best score 172 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:21

B9R8F1              	100.00%		A3LNW8              	100.00%
B9RXL5              	61.52%		
B9T2U0              	60.85%		
B9RCK2              	56.04%		
B9SJ93              	55.03%		
B9RL17              	48.10%		
B9SDM2              	47.87%		
B9SDN2              	47.32%		
B9S3P2              	46.31%		
B9SLE6              	44.97%		
B9S6N9              	28.19%		
B9S785              	19.35%		
B9RPG6              	16.55%		
B9SVE4              	16.22%		
B9R9H6              	12.30%		
B9S840              	12.30%		
B9REN6              	9.17%		
B9SDN7              	8.39%		
B9S9E7              	7.72%		
Bootstrap support for B9R8F1 as seed ortholog is 98%.
Bootstrap support for A3LNW8 as seed ortholog is 67%.
Alternative seed ortholog is A3LWS0 (21 bits away from this cluster)

Group of orthologs #1042. Best score 172 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:172

B9T072              	100.00%		A3LXY3              	100.00%
B9SWJ6              	43.77%		
B9T5Z5              	29.87%		
B9RYL0              	27.32%		
B9RPZ8              	23.80%		
B9RQ00              	14.86%		
Bootstrap support for B9T072 as seed ortholog is 100%.
Bootstrap support for A3LXY3 as seed ortholog is 100%.

Group of orthologs #1043. Best score 172 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:172

B9RPA3              	100.00%		A3LX44              	100.00%
B9SLK9              	34.15%		
Bootstrap support for B9RPA3 as seed ortholog is 100%.
Bootstrap support for A3LX44 as seed ortholog is 100%.

Group of orthologs #1044. Best score 172 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:172

B9RB03              	100.00%		A3GEY1              	100.00%
Bootstrap support for B9RB03 as seed ortholog is 100%.
Bootstrap support for A3GEY1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 172 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:172

B9RW01              	100.00%		A3LQN1              	100.00%
Bootstrap support for B9RW01 as seed ortholog is 100%.
Bootstrap support for A3LQN1 as seed ortholog is 100%.

Group of orthologs #1046. Best score 172 bits
Score difference with first non-orthologous sequence - R.communis:172 S.stipitis:172

B9SB09              	100.00%		A3LS87              	100.00%
Bootstrap support for B9SB09 as seed ortholog is 100%.
Bootstrap support for A3LS87 as seed ortholog is 100%.

Group of orthologs #1047. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:124

B9RMR2              	100.00%		A3LXZ3              	100.00%
B9RMQ7              	42.56%		
B9RMQ9              	40.46%		
B9RMR1              	38.57%		
B9RMQ8              	33.96%		
B9RMR0              	26.42%		
Bootstrap support for B9RMR2 as seed ortholog is 99%.
Bootstrap support for A3LXZ3 as seed ortholog is 99%.

Group of orthologs #1048. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:171 S.stipitis:171

B9RGS9              	100.00%		A3LQC7              	100.00%
B9SY15              	47.59%		
B9SX17              	41.30%		
Bootstrap support for B9RGS9 as seed ortholog is 100%.
Bootstrap support for A3LQC7 as seed ortholog is 100%.

Group of orthologs #1049. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:171

B9SH20              	100.00%		A3GG02              	100.00%
B9R6Y7              	57.99%		
B9T124              	19.63%		
Bootstrap support for B9SH20 as seed ortholog is 91%.
Bootstrap support for A3GG02 as seed ortholog is 100%.

Group of orthologs #1050. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:38 S.stipitis:171

B9RKW9              	100.00%		A3M047              	100.00%
B9RPF5              	64.00%		
Bootstrap support for B9RKW9 as seed ortholog is 96%.
Bootstrap support for A3M047 as seed ortholog is 100%.

Group of orthologs #1051. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:171 S.stipitis:171

B9RDD5              	100.00%		A3GGN3              	100.00%
Bootstrap support for B9RDD5 as seed ortholog is 100%.
Bootstrap support for A3GGN3 as seed ortholog is 100%.

Group of orthologs #1052. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:171 S.stipitis:171

B9RHV1              	100.00%		A3LU51              	100.00%
Bootstrap support for B9RHV1 as seed ortholog is 100%.
Bootstrap support for A3LU51 as seed ortholog is 100%.

Group of orthologs #1053. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:171 S.stipitis:171

B9S9S0              	100.00%		A3GH11              	100.00%
Bootstrap support for B9S9S0 as seed ortholog is 100%.
Bootstrap support for A3GH11 as seed ortholog is 100%.

Group of orthologs #1054. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:110 S.stipitis:171

B9S4A1              	100.00%		A3M0G9              	100.00%
Bootstrap support for B9S4A1 as seed ortholog is 100%.
Bootstrap support for A3M0G9 as seed ortholog is 100%.

Group of orthologs #1055. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:171 S.stipitis:171

B9SHR5              	100.00%		A3LN59              	100.00%
Bootstrap support for B9SHR5 as seed ortholog is 100%.
Bootstrap support for A3LN59 as seed ortholog is 100%.

Group of orthologs #1056. Best score 171 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:171

B9SIR5              	100.00%		A3LPF7              	100.00%
Bootstrap support for B9SIR5 as seed ortholog is 94%.
Bootstrap support for A3LPF7 as seed ortholog is 100%.

Group of orthologs #1057. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9REW9              	100.00%		A3LTJ0              	100.00%
B9SCK9              	100.00%		
B9SHE8              	11.64%		
Bootstrap support for B9REW9 as seed ortholog is 100%.
Bootstrap support for B9SCK9 as seed ortholog is 100%.
Bootstrap support for A3LTJ0 as seed ortholog is 100%.

Group of orthologs #1058. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9RAH5              	100.00%		A3LSA0              	100.00%
B9SB41              	41.26%		
Bootstrap support for B9RAH5 as seed ortholog is 100%.
Bootstrap support for A3LSA0 as seed ortholog is 100%.

Group of orthologs #1059. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:78

B9RKA8              	100.00%		A3LMZ6              	100.00%
B9RQR8              	44.38%		
Bootstrap support for B9RKA8 as seed ortholog is 87%.
Bootstrap support for A3LMZ6 as seed ortholog is 96%.

Group of orthologs #1060. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9SNF5              	100.00%		A3LPV1              	100.00%
B9SNF6              	61.74%		
Bootstrap support for B9SNF5 as seed ortholog is 100%.
Bootstrap support for A3LPV1 as seed ortholog is 100%.

Group of orthologs #1061. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9SZQ7              	100.00%		A3LP14              	100.00%
B9T634              	79.81%		
Bootstrap support for B9SZQ7 as seed ortholog is 100%.
Bootstrap support for A3LP14 as seed ortholog is 100%.

Group of orthologs #1062. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:75

B9SW87              	100.00%		A3M0K7              	100.00%
B9SED4              	58.62%		
Bootstrap support for B9SW87 as seed ortholog is 90%.
Bootstrap support for A3M0K7 as seed ortholog is 97%.

Group of orthologs #1063. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:170

B9RPA8              	100.00%		A3GGZ5              	100.00%
Bootstrap support for B9RPA8 as seed ortholog is 99%.
Bootstrap support for A3GGZ5 as seed ortholog is 100%.

Group of orthologs #1064. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9RZ27              	100.00%		A3LN33              	100.00%
Bootstrap support for B9RZ27 as seed ortholog is 100%.
Bootstrap support for A3LN33 as seed ortholog is 100%.

Group of orthologs #1065. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9SK32              	100.00%		A3GFC5              	100.00%
Bootstrap support for B9SK32 as seed ortholog is 100%.
Bootstrap support for A3GFC5 as seed ortholog is 100%.

Group of orthologs #1066. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9SRG9              	100.00%		A3GG37              	100.00%
Bootstrap support for B9SRG9 as seed ortholog is 100%.
Bootstrap support for A3GG37 as seed ortholog is 100%.

Group of orthologs #1067. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:108

B9SWZ0              	100.00%		A3GGM6              	100.00%
Bootstrap support for B9SWZ0 as seed ortholog is 99%.
Bootstrap support for A3GGM6 as seed ortholog is 99%.

Group of orthologs #1068. Best score 170 bits
Score difference with first non-orthologous sequence - R.communis:170 S.stipitis:170

B9SJ98              	100.00%		A3LZJ2              	100.00%
Bootstrap support for B9SJ98 as seed ortholog is 100%.
Bootstrap support for A3LZJ2 as seed ortholog is 100%.

Group of orthologs #1069. Best score 169 bits
Score difference with first non-orthologous sequence - R.communis:169 S.stipitis:74

B9RJG5              	100.00%		A3LX35              	100.00%
B9T771              	45.16%		A3LRB0              	29.60%
B9T5P7              	38.94%		
B9T4P2              	25.00%		
Bootstrap support for B9RJG5 as seed ortholog is 100%.
Bootstrap support for A3LX35 as seed ortholog is 95%.

Group of orthologs #1070. Best score 169 bits
Score difference with first non-orthologous sequence - R.communis:169 S.stipitis:169

B9S038              	100.00%		Q9P414              	100.00%
Bootstrap support for B9S038 as seed ortholog is 100%.
Bootstrap support for Q9P414 as seed ortholog is 100%.

Group of orthologs #1071. Best score 169 bits
Score difference with first non-orthologous sequence - R.communis:169 S.stipitis:169

B9SRY4              	100.00%		A3GF99              	100.00%
Bootstrap support for B9SRY4 as seed ortholog is 100%.
Bootstrap support for A3GF99 as seed ortholog is 100%.

Group of orthologs #1072. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:168

B9R741              	100.00%		A3LN44              	100.00%
B9SNA0              	32.76%		
B9S2W0              	24.44%		
B9RS97              	23.57%		
B9RUW5              	20.97%		
Bootstrap support for B9R741 as seed ortholog is 99%.
Bootstrap support for A3LN44 as seed ortholog is 100%.

Group of orthologs #1073. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:168

B9SSF9              	100.00%		A3LZE3              	100.00%
B9S6A7              	37.09%		
B9RH83              	35.45%		
B9S518              	31.15%		
Bootstrap support for B9SSF9 as seed ortholog is 99%.
Bootstrap support for A3LZE3 as seed ortholog is 100%.

Group of orthologs #1074. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:168

B9RY60              	100.00%		A3GI20              	100.00%
B9R735              	8.47%		
Bootstrap support for B9RY60 as seed ortholog is 99%.
Bootstrap support for A3GI20 as seed ortholog is 100%.

Group of orthologs #1075. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:14 S.stipitis:168

B9SSW5              	100.00%		A3LQ89              	100.00%
B9RZC3              	5.93%		
Bootstrap support for B9SSW5 as seed ortholog is 61%.
Alternative seed ortholog is B9T495 (14 bits away from this cluster)
Bootstrap support for A3LQ89 as seed ortholog is 100%.

Group of orthologs #1076. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:114

B9RK01              	100.00%		A3GHV8              	100.00%
Bootstrap support for B9RK01 as seed ortholog is 100%.
Bootstrap support for A3GHV8 as seed ortholog is 100%.

Group of orthologs #1077. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:168

B9RLB3              	100.00%		A3LPE2              	100.00%
Bootstrap support for B9RLB3 as seed ortholog is 100%.
Bootstrap support for A3LPE2 as seed ortholog is 100%.

Group of orthologs #1078. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:168

B9S506              	100.00%		A3LTJ4              	100.00%
Bootstrap support for B9S506 as seed ortholog is 100%.
Bootstrap support for A3LTJ4 as seed ortholog is 100%.

Group of orthologs #1079. Best score 168 bits
Score difference with first non-orthologous sequence - R.communis:168 S.stipitis:168

B9SYQ5              	100.00%		A3LRL1              	100.00%
Bootstrap support for B9SYQ5 as seed ortholog is 100%.
Bootstrap support for A3LRL1 as seed ortholog is 100%.

Group of orthologs #1080. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:81

B9SCQ6              	100.00%		A3LS01              	100.00%
B9RDF6              	100.00%		A3LSP0              	100.00%
B9RMT4              	33.37%		A3LR60              	46.98%
B9RDF7              	31.82%		A3LRT5              	46.31%
B9RCD6              	28.28%		A3LZV9              	37.54%
B9S8Z6              	27.29%		
B9SHY9              	26.80%		
B9STA8              	25.53%		
B9SU81              	24.92%		
B9S655              	24.47%		
B9S657              	23.94%		
B9RDT6              	23.31%		
B9S0F8              	22.78%		
B9RAH1              	20.87%		
B9SST9              	18.64%		
B9SM19              	17.48%		
B9S4U5              	17.06%		
B9S4U7              	16.95%		
B9RBJ0              	16.74%		
B9T5M5              	14.41%		
B9SJY2              	11.65%		
Bootstrap support for B9SCQ6 as seed ortholog is 75%.
Bootstrap support for B9RDF6 as seed ortholog is 66%.
Alternative seed ortholog is B9S3L4 (33 bits away from this cluster)
Bootstrap support for A3LS01 as seed ortholog is 95%.
Bootstrap support for A3LSP0 as seed ortholog is 90%.

Group of orthologs #1081. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:167 S.stipitis:167

B9S4S4              	100.00%		A3GHU6              	100.00%
                    	       		A3LWA9              	10.84%
Bootstrap support for B9S4S4 as seed ortholog is 100%.
Bootstrap support for A3GHU6 as seed ortholog is 100%.

Group of orthologs #1082. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:167

B9RXG8              	100.00%		A3LWT3              	100.00%
B9STY6              	54.18%		
Bootstrap support for B9RXG8 as seed ortholog is 90%.
Bootstrap support for A3LWT3 as seed ortholog is 100%.

Group of orthologs #1083. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:167 S.stipitis:167

B9SDK1              	100.00%		A3M0I4              	100.00%
Bootstrap support for B9SDK1 as seed ortholog is 100%.
Bootstrap support for A3M0I4 as seed ortholog is 100%.

Group of orthologs #1084. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:167 S.stipitis:167

B9SPX5              	100.00%		A3LUF8              	100.00%
Bootstrap support for B9SPX5 as seed ortholog is 100%.
Bootstrap support for A3LUF8 as seed ortholog is 100%.

Group of orthologs #1085. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:167 S.stipitis:167

B9T2R8              	100.00%		A3GFA9              	100.00%
Bootstrap support for B9T2R8 as seed ortholog is 100%.
Bootstrap support for A3GFA9 as seed ortholog is 100%.

Group of orthologs #1086. Best score 167 bits
Score difference with first non-orthologous sequence - R.communis:167 S.stipitis:167

B9T6A2              	100.00%		A3LWD7              	100.00%
Bootstrap support for B9T6A2 as seed ortholog is 100%.
Bootstrap support for A3LWD7 as seed ortholog is 100%.

Group of orthologs #1087. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:30 S.stipitis:166

B9R8N2              	100.00%		A3LPH1              	100.00%
B9S6T5              	53.45%		
B9RU58              	14.91%		
B9SB64              	10.13%		
Bootstrap support for B9R8N2 as seed ortholog is 85%.
Bootstrap support for A3LPH1 as seed ortholog is 100%.

Group of orthologs #1088. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:166 S.stipitis:166

B9R8U8              	100.00%		A3GG10              	100.00%
B9SN77              	60.20%		
B9SRG2              	58.46%		
Bootstrap support for B9R8U8 as seed ortholog is 100%.
Bootstrap support for A3GG10 as seed ortholog is 100%.

Group of orthologs #1089. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:65

B9SCD4              	100.00%		A3LSY6              	100.00%
B9RHY8              	100.00%		A3LR75              	100.00%
Bootstrap support for B9SCD4 as seed ortholog is 98%.
Bootstrap support for B9RHY8 as seed ortholog is 98%.
Bootstrap support for A3LSY6 as seed ortholog is 97%.
Bootstrap support for A3LR75 as seed ortholog is 97%.

Group of orthologs #1090. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:23 S.stipitis:56

B9SXP2              	100.00%		A3LQ26              	100.00%
B9RP13              	47.63%		
B9RNS9              	33.69%		
Bootstrap support for B9SXP2 as seed ortholog is 70%.
Alternative seed ortholog is B9S536 (23 bits away from this cluster)
Bootstrap support for A3LQ26 as seed ortholog is 92%.

Group of orthologs #1091. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:114

B9RJG7              	100.00%		A3LN94              	100.00%
                    	       		A3LXD2              	17.27%
Bootstrap support for B9RJG7 as seed ortholog is 99%.
Bootstrap support for A3LN94 as seed ortholog is 99%.

Group of orthologs #1092. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:166

B9T7T9              	100.00%		A3LQD1              	100.00%
B9SV28              	14.97%		
Bootstrap support for B9T7T9 as seed ortholog is 99%.
Bootstrap support for A3LQD1 as seed ortholog is 100%.

Group of orthologs #1093. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:166 S.stipitis:166

B9S6K6              	100.00%		A3LRB1              	100.00%
Bootstrap support for B9S6K6 as seed ortholog is 100%.
Bootstrap support for A3LRB1 as seed ortholog is 100%.

Group of orthologs #1094. Best score 166 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:32

B9SSD6              	100.00%		A3LU67              	100.00%
Bootstrap support for B9SSD6 as seed ortholog is 99%.
Bootstrap support for A3LU67 as seed ortholog is 83%.

Group of orthologs #1095. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:165

B9RCA6              	100.00%		A3GFQ6              	100.00%
B9RCA7              	56.42%		
B9SUT6              	50.84%		
B9RNU5              	41.90%		
Bootstrap support for B9RCA6 as seed ortholog is 100%.
Bootstrap support for A3GFQ6 as seed ortholog is 100%.

Group of orthologs #1096. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:165

B9RGC1              	100.00%		P49434              	100.00%
Bootstrap support for B9RGC1 as seed ortholog is 100%.
Bootstrap support for P49434 as seed ortholog is 100%.

Group of orthologs #1097. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:165

B9RUM2              	100.00%		A3LNJ3              	100.00%
Bootstrap support for B9RUM2 as seed ortholog is 100%.
Bootstrap support for A3LNJ3 as seed ortholog is 100%.

Group of orthologs #1098. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:165

B9RZ84              	100.00%		A3GGH5              	100.00%
Bootstrap support for B9RZ84 as seed ortholog is 100%.
Bootstrap support for A3GGH5 as seed ortholog is 100%.

Group of orthologs #1099. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:165

B9S661              	100.00%		A3LTS4              	100.00%
Bootstrap support for B9S661 as seed ortholog is 100%.
Bootstrap support for A3LTS4 as seed ortholog is 100%.

Group of orthologs #1100. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:165 S.stipitis:165

B9SQY3              	100.00%		A3GEV2              	100.00%
Bootstrap support for B9SQY3 as seed ortholog is 100%.
Bootstrap support for A3GEV2 as seed ortholog is 100%.

Group of orthologs #1101. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:106

B9SGE7              	100.00%		A3LY98              	100.00%
Bootstrap support for B9SGE7 as seed ortholog is 99%.
Bootstrap support for A3LY98 as seed ortholog is 99%.

Group of orthologs #1102. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:165

B9ST29              	100.00%		A3LU96              	100.00%
Bootstrap support for B9ST29 as seed ortholog is 93%.
Bootstrap support for A3LU96 as seed ortholog is 100%.

Group of orthologs #1103. Best score 165 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:165

B9SZS3              	100.00%		A3M0G0              	100.00%
Bootstrap support for B9SZS3 as seed ortholog is 88%.
Bootstrap support for A3M0G0 as seed ortholog is 100%.

Group of orthologs #1104. Best score 164 bits
Score difference with first non-orthologous sequence - R.communis:164 S.stipitis:164

B9T6Z0              	100.00%		A3LZD3              	100.00%
B9SIY7              	39.95%		
B9RLB5              	39.50%		
B9RSU9              	20.99%		
Bootstrap support for B9T6Z0 as seed ortholog is 100%.
Bootstrap support for A3LZD3 as seed ortholog is 100%.

Group of orthologs #1105. Best score 164 bits
Score difference with first non-orthologous sequence - R.communis:164 S.stipitis:164

B9SGJ6              	100.00%		A3LUW4              	100.00%
B9S999              	82.26%		
Bootstrap support for B9SGJ6 as seed ortholog is 100%.
Bootstrap support for A3LUW4 as seed ortholog is 100%.

Group of orthologs #1106. Best score 164 bits
Score difference with first non-orthologous sequence - R.communis:164 S.stipitis:164

B9SYV4              	100.00%		A3LRQ7              	100.00%
                    	       		A3LVV1              	95.62%
Bootstrap support for B9SYV4 as seed ortholog is 100%.
Bootstrap support for A3LRQ7 as seed ortholog is 100%.

Group of orthologs #1107. Best score 164 bits
Score difference with first non-orthologous sequence - R.communis:164 S.stipitis:164

B9S5Q0              	100.00%		A3LWK3              	100.00%
Bootstrap support for B9S5Q0 as seed ortholog is 100%.
Bootstrap support for A3LWK3 as seed ortholog is 100%.

Group of orthologs #1108. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:163 S.stipitis:163

B9RWY8              	100.00%		A3LNE4              	100.00%
B9RES8              	97.25%		
Bootstrap support for B9RWY8 as seed ortholog is 100%.
Bootstrap support for A3LNE4 as seed ortholog is 100%.

Group of orthologs #1109. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:163 S.stipitis:163

B9RIE1              	100.00%		A3GGU9              	100.00%
Bootstrap support for B9RIE1 as seed ortholog is 100%.
Bootstrap support for A3GGU9 as seed ortholog is 100%.

Group of orthologs #1110. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:163

B9RKM1              	100.00%		A3GI06              	100.00%
Bootstrap support for B9RKM1 as seed ortholog is 92%.
Bootstrap support for A3GI06 as seed ortholog is 100%.

Group of orthologs #1111. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:163

B9RHZ9              	100.00%		A3LW68              	100.00%
Bootstrap support for B9RHZ9 as seed ortholog is 99%.
Bootstrap support for A3LW68 as seed ortholog is 100%.

Group of orthologs #1112. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:163 S.stipitis:163

B9RUW3              	100.00%		A3GGZ1              	100.00%
Bootstrap support for B9RUW3 as seed ortholog is 100%.
Bootstrap support for A3GGZ1 as seed ortholog is 100%.

Group of orthologs #1113. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:163

B9RVI5              	100.00%		A3GI98              	100.00%
Bootstrap support for B9RVI5 as seed ortholog is 99%.
Bootstrap support for A3GI98 as seed ortholog is 100%.

Group of orthologs #1114. Best score 163 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:163

B9T1L9              	100.00%		A3GG08              	100.00%
Bootstrap support for B9T1L9 as seed ortholog is 86%.
Bootstrap support for A3GG08 as seed ortholog is 100%.

Group of orthologs #1115. Best score 162 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:162

B9RXZ5              	100.00%		A3LV46              	100.00%
Bootstrap support for B9RXZ5 as seed ortholog is 100%.
Bootstrap support for A3LV46 as seed ortholog is 100%.

Group of orthologs #1116. Best score 162 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:162

B9S9E5              	100.00%		A3GGF3              	100.00%
Bootstrap support for B9S9E5 as seed ortholog is 100%.
Bootstrap support for A3GGF3 as seed ortholog is 100%.

Group of orthologs #1117. Best score 162 bits
Score difference with first non-orthologous sequence - R.communis:162 S.stipitis:162

B9SBX8              	100.00%		A3GI95              	100.00%
Bootstrap support for B9SBX8 as seed ortholog is 100%.
Bootstrap support for A3GI95 as seed ortholog is 100%.

Group of orthologs #1118. Best score 162 bits
Score difference with first non-orthologous sequence - R.communis:32 S.stipitis:50

B9SHK1              	100.00%		A3LQ03              	100.00%
Bootstrap support for B9SHK1 as seed ortholog is 71%.
Alternative seed ortholog is B9S8W7 (32 bits away from this cluster)
Bootstrap support for A3LQ03 as seed ortholog is 82%.

Group of orthologs #1119. Best score 161 bits
Score difference with first non-orthologous sequence - R.communis:47 S.stipitis:161

B9R884              	100.00%		A3GHQ2              	100.00%
Bootstrap support for B9R884 as seed ortholog is 98%.
Bootstrap support for A3GHQ2 as seed ortholog is 100%.

Group of orthologs #1120. Best score 161 bits
Score difference with first non-orthologous sequence - R.communis:161 S.stipitis:161

B9REU1              	100.00%		A3GHU3              	100.00%
Bootstrap support for B9REU1 as seed ortholog is 100%.
Bootstrap support for A3GHU3 as seed ortholog is 100%.

Group of orthologs #1121. Best score 161 bits
Score difference with first non-orthologous sequence - R.communis:17 S.stipitis:161

B9RIR3              	100.00%		A3LU63              	100.00%
Bootstrap support for B9RIR3 as seed ortholog is 91%.
Bootstrap support for A3LU63 as seed ortholog is 100%.

Group of orthologs #1122. Best score 161 bits
Score difference with first non-orthologous sequence - R.communis:161 S.stipitis:161

B9S678              	100.00%		A3LQ24              	100.00%
Bootstrap support for B9S678 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #1123. Best score 161 bits
Score difference with first non-orthologous sequence - R.communis:161 S.stipitis:161

B9SP31              	100.00%		A3LR74              	100.00%
Bootstrap support for B9SP31 as seed ortholog is 100%.
Bootstrap support for A3LR74 as seed ortholog is 100%.

Group of orthologs #1124. Best score 160 bits
Score difference with first non-orthologous sequence - R.communis:160 S.stipitis:160

B9SIR4              	100.00%		A3LRG1              	100.00%
B9R700              	71.85%		
B9S275              	71.38%		
B9T1I2              	57.23%		
B9RPK4              	48.65%		
B9RYT4              	45.86%		
B9SQV3              	42.92%		
Bootstrap support for B9SIR4 as seed ortholog is 100%.
Bootstrap support for A3LRG1 as seed ortholog is 100%.

Group of orthologs #1125. Best score 160 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:160

B9SMC5              	100.00%		A3GH88              	100.00%
B9S6V9              	63.60%		A3GHQ6              	28.56%
B9SDP5              	13.46%		
Bootstrap support for B9SMC5 as seed ortholog is 99%.
Bootstrap support for A3GH88 as seed ortholog is 100%.

Group of orthologs #1126. Best score 160 bits
Score difference with first non-orthologous sequence - R.communis:160 S.stipitis:160

B9RI11              	100.00%		A3LY48              	100.00%
Bootstrap support for B9RI11 as seed ortholog is 100%.
Bootstrap support for A3LY48 as seed ortholog is 100%.

Group of orthologs #1127. Best score 160 bits
Score difference with first non-orthologous sequence - R.communis:160 S.stipitis:160

B9RMJ8              	100.00%		A3LXF6              	100.00%
Bootstrap support for B9RMJ8 as seed ortholog is 100%.
Bootstrap support for A3LXF6 as seed ortholog is 100%.

Group of orthologs #1128. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:159

B9R8X2              	100.00%		A3LRX7              	100.00%
B9S2N8              	41.05%		A3GF42              	19.79%
B9RH87              	32.49%		
Bootstrap support for B9R8X2 as seed ortholog is 100%.
Bootstrap support for A3LRX7 as seed ortholog is 100%.

Group of orthologs #1129. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:159

B9SVZ4              	100.00%		A3GI69              	100.00%
B9SJ18              	57.52%		
Bootstrap support for B9SVZ4 as seed ortholog is 99%.
Bootstrap support for A3GI69 as seed ortholog is 100%.

Group of orthologs #1130. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:87

B9T337              	100.00%		A3GFX4              	100.00%
B9RIM4              	57.53%		
Bootstrap support for B9T337 as seed ortholog is 97%.
Bootstrap support for A3GFX4 as seed ortholog is 97%.

Group of orthologs #1131. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:159

B9STE6              	100.00%		A3LX38              	100.00%
B9S1X7              	96.09%		
Bootstrap support for B9STE6 as seed ortholog is 100%.
Bootstrap support for A3LX38 as seed ortholog is 100%.

Group of orthologs #1132. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:159

B9TF82              	100.00%		A3LTM0              	100.00%
B9TD25              	5.15%		
Bootstrap support for B9TF82 as seed ortholog is 100%.
Bootstrap support for A3LTM0 as seed ortholog is 100%.

Group of orthologs #1133. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:31 S.stipitis:159

B9S007              	100.00%		A3GH24              	100.00%
Bootstrap support for B9S007 as seed ortholog is 85%.
Bootstrap support for A3GH24 as seed ortholog is 100%.

Group of orthologs #1134. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:159

B9SB59              	100.00%		A3LSV4              	100.00%
Bootstrap support for B9SB59 as seed ortholog is 99%.
Bootstrap support for A3LSV4 as seed ortholog is 100%.

Group of orthologs #1135. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:159

B9SFN0              	100.00%		A3LTN3              	100.00%
Bootstrap support for B9SFN0 as seed ortholog is 100%.
Bootstrap support for A3LTN3 as seed ortholog is 100%.

Group of orthologs #1136. Best score 159 bits
Score difference with first non-orthologous sequence - R.communis:159 S.stipitis:159

B9SJ78              	100.00%		A3LVD5              	100.00%
Bootstrap support for B9SJ78 as seed ortholog is 100%.
Bootstrap support for A3LVD5 as seed ortholog is 100%.

Group of orthologs #1137. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:29

B9T1M1              	100.00%		A3LU47              	100.00%
B9SP03              	57.74%		A3LUM3              	29.86%
B9R9T4              	34.61%		
B9RLD5              	32.97%		
B9RRS3              	24.95%		
B9RL85              	11.66%		
Bootstrap support for B9T1M1 as seed ortholog is 100%.
Bootstrap support for A3LU47 as seed ortholog is 75%.

Group of orthologs #1138. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:158

B9SI32              	100.00%		A3LSB2              	100.00%
B9T5Y1              	59.02%		
B9T5Y0              	57.76%		
B9SI33              	57.18%		
B9SK18              	51.01%		
B9SI34              	42.62%		
Bootstrap support for B9SI32 as seed ortholog is 100%.
Bootstrap support for A3LSB2 as seed ortholog is 100%.

Group of orthologs #1139. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:158

B9RWU5              	100.00%		A3LPA4              	100.00%
B9RWU6              	72.42%		
B9REC3              	32.31%		
Bootstrap support for B9RWU5 as seed ortholog is 98%.
Bootstrap support for A3LPA4 as seed ortholog is 100%.

Group of orthologs #1140. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:158

B9RQ70              	100.00%		A3LVN0              	100.00%
Bootstrap support for B9RQ70 as seed ortholog is 100%.
Bootstrap support for A3LVN0 as seed ortholog is 100%.

Group of orthologs #1141. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:158

B9RYY8              	100.00%		A3LQ28              	100.00%
Bootstrap support for B9RYY8 as seed ortholog is 100%.
Bootstrap support for A3LQ28 as seed ortholog is 100%.

Group of orthologs #1142. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:158

B9RZN3              	100.00%		A3LR76              	100.00%
Bootstrap support for B9RZN3 as seed ortholog is 100%.
Bootstrap support for A3LR76 as seed ortholog is 100%.

Group of orthologs #1143. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:158

B9SE89              	100.00%		A3LU49              	100.00%
Bootstrap support for B9SE89 as seed ortholog is 98%.
Bootstrap support for A3LU49 as seed ortholog is 100%.

Group of orthologs #1144. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:158 S.stipitis:158

B9SHW7              	100.00%		A3LQM2              	100.00%
Bootstrap support for B9SHW7 as seed ortholog is 100%.
Bootstrap support for A3LQM2 as seed ortholog is 100%.

Group of orthologs #1145. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:158

B9SJF2              	100.00%		A3LQ86              	100.00%
Bootstrap support for B9SJF2 as seed ortholog is 97%.
Bootstrap support for A3LQ86 as seed ortholog is 100%.

Group of orthologs #1146. Best score 158 bits
Score difference with first non-orthologous sequence - R.communis:75 S.stipitis:158

B9SNV8              	100.00%		A3LNF6              	100.00%
Bootstrap support for B9SNV8 as seed ortholog is 99%.
Bootstrap support for A3LNF6 as seed ortholog is 100%.

Group of orthologs #1147. Best score 157 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:57

B9SLI5              	100.00%		A3GHI2              	100.00%
B9R8X3              	35.62%		
Bootstrap support for B9SLI5 as seed ortholog is 78%.
Bootstrap support for A3GHI2 as seed ortholog is 83%.

Group of orthologs #1148. Best score 157 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:157

B9SJP1              	100.00%		A3LZK8              	100.00%
B9R940              	16.12%		
Bootstrap support for B9SJP1 as seed ortholog is 100%.
Bootstrap support for A3LZK8 as seed ortholog is 100%.

Group of orthologs #1149. Best score 157 bits
Score difference with first non-orthologous sequence - R.communis:157 S.stipitis:157

B9RXA0              	100.00%		A3GHY4              	100.00%
Bootstrap support for B9RXA0 as seed ortholog is 100%.
Bootstrap support for A3GHY4 as seed ortholog is 100%.

Group of orthologs #1150. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9S358              	100.00%		A3LNX1              	100.00%
B9T6M4              	69.62%		A3LNX2              	73.95%
B9S7C1              	54.68%		A3LV79              	15.41%
B9R823              	35.06%		A3LQQ9              	14.54%
B9SKP9              	33.86%		
B9S1I2              	32.87%		
B9SUW7              	32.67%		
B9S4B5              	32.27%		
B9SKP8              	31.87%		
B9SKJ1              	31.77%		
B9SS43              	30.48%		
B9R822              	30.08%		
B9RU48              	29.88%		
B9SER1              	29.38%		
B9S740              	28.19%		
B9RGA9              	27.09%		
B9RUL7              	25.60%		
B9R934              	25.50%		
B9SH54              	25.40%		
B9RUL6              	24.90%		
B9RUE5              	24.80%		
B9RUJ9              	24.40%		
B9S8G4              	24.40%		
B9RUL4              	24.30%		
B9RUL5              	24.10%		
B9S2D6              	23.80%		
B9SQ63              	23.31%		
B9RUL8              	20.92%		
B9R944              	19.62%		
B9RKM8              	19.42%		
B9RFS2              	19.22%		
B9R7I9              	19.12%		
B9SKQ0              	18.53%		
B9RQI9              	18.23%		
B9RS25              	17.83%		
B9R935              	16.83%		
B9T1Z5              	15.84%		
B9T1Z3              	15.44%		
B9S2C4              	15.24%		
B9RUG8              	13.45%		
B9RS27              	8.17%		
B9S733              	8.17%		
Bootstrap support for B9S358 as seed ortholog is 100%.
Bootstrap support for A3LNX1 as seed ortholog is 100%.

Group of orthologs #1151. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9SW67              	100.00%		A3LVI6              	100.00%
B9SD62              	44.95%		A3GFZ8              	5.48%
Bootstrap support for B9SW67 as seed ortholog is 100%.
Bootstrap support for A3LVI6 as seed ortholog is 100%.

Group of orthologs #1152. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9RX37              	100.00%		A3GGS2              	100.00%
B9RSV2              	26.55%		
Bootstrap support for B9RX37 as seed ortholog is 100%.
Bootstrap support for A3GGS2 as seed ortholog is 100%.

Group of orthologs #1153. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9T152              	100.00%		A3LV58              	100.00%
B9SYP0              	64.50%		
Bootstrap support for B9T152 as seed ortholog is 100%.
Bootstrap support for A3LV58 as seed ortholog is 100%.

Group of orthologs #1154. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9RTB1              	100.00%		A3GG44              	100.00%
Bootstrap support for B9RTB1 as seed ortholog is 100%.
Bootstrap support for A3GG44 as seed ortholog is 100%.

Group of orthologs #1155. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:32 S.stipitis:156

B9S297              	100.00%		A3GHM5              	100.00%
Bootstrap support for B9S297 as seed ortholog is 73%.
Alternative seed ortholog is B9SYN9 (32 bits away from this cluster)
Bootstrap support for A3GHM5 as seed ortholog is 100%.

Group of orthologs #1156. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9RVA4              	100.00%		A3LV47              	100.00%
Bootstrap support for B9RVA4 as seed ortholog is 100%.
Bootstrap support for A3LV47 as seed ortholog is 100%.

Group of orthologs #1157. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9SR88              	100.00%		A3GGD4              	100.00%
Bootstrap support for B9SR88 as seed ortholog is 100%.
Bootstrap support for A3GGD4 as seed ortholog is 100%.

Group of orthologs #1158. Best score 156 bits
Score difference with first non-orthologous sequence - R.communis:156 S.stipitis:156

B9SP43              	100.00%		A3LSX2              	100.00%
Bootstrap support for B9SP43 as seed ortholog is 100%.
Bootstrap support for A3LSX2 as seed ortholog is 100%.

Group of orthologs #1159. Best score 155 bits
Score difference with first non-orthologous sequence - R.communis:28 S.stipitis:155

B9STP8              	100.00%		A3GHC1              	100.00%
B9RUZ2              	80.00%		
B9S4R2              	40.95%		
Bootstrap support for B9STP8 as seed ortholog is 95%.
Bootstrap support for A3GHC1 as seed ortholog is 100%.

Group of orthologs #1160. Best score 155 bits
Score difference with first non-orthologous sequence - R.communis:155 S.stipitis:93

B9S638              	100.00%		A3LWT0              	100.00%
B9SXL5              	33.27%		
Bootstrap support for B9S638 as seed ortholog is 100%.
Bootstrap support for A3LWT0 as seed ortholog is 99%.

Group of orthologs #1161. Best score 155 bits
Score difference with first non-orthologous sequence - R.communis:155 S.stipitis:155

B9R727              	100.00%		A3LZ79              	100.00%
Bootstrap support for B9R727 as seed ortholog is 100%.
Bootstrap support for A3LZ79 as seed ortholog is 100%.

Group of orthologs #1162. Best score 155 bits
Score difference with first non-orthologous sequence - R.communis:155 S.stipitis:155

B9RTN1              	100.00%		A3LQN2              	100.00%
Bootstrap support for B9RTN1 as seed ortholog is 100%.
Bootstrap support for A3LQN2 as seed ortholog is 100%.

Group of orthologs #1163. Best score 155 bits
Score difference with first non-orthologous sequence - R.communis:155 S.stipitis:155

B9RX54              	100.00%		A3LRF6              	100.00%
Bootstrap support for B9RX54 as seed ortholog is 100%.
Bootstrap support for A3LRF6 as seed ortholog is 100%.

Group of orthologs #1164. Best score 155 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:155

B9SYQ9              	100.00%		A3LTY6              	100.00%
Bootstrap support for B9SYQ9 as seed ortholog is 99%.
Bootstrap support for A3LTY6 as seed ortholog is 100%.

Group of orthologs #1165. Best score 154 bits
Score difference with first non-orthologous sequence - R.communis:154 S.stipitis:154

B9SLP3              	100.00%		A3LQF1              	100.00%
B9SW00              	100.00%		
B9SWH2              	86.82%		
Bootstrap support for B9SLP3 as seed ortholog is 100%.
Bootstrap support for B9SW00 as seed ortholog is 100%.
Bootstrap support for A3LQF1 as seed ortholog is 100%.

Group of orthologs #1166. Best score 154 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:154

B9RIE4              	100.00%		A3GGQ8              	100.00%
                    	       		A3LS63              	31.17%
Bootstrap support for B9RIE4 as seed ortholog is 98%.
Bootstrap support for A3GGQ8 as seed ortholog is 100%.

Group of orthologs #1167. Best score 154 bits
Score difference with first non-orthologous sequence - R.communis:154 S.stipitis:154

B9RPG0              	100.00%		A3LQU1              	100.00%
Bootstrap support for B9RPG0 as seed ortholog is 100%.
Bootstrap support for A3LQU1 as seed ortholog is 100%.

Group of orthologs #1168. Best score 154 bits
Score difference with first non-orthologous sequence - R.communis:154 S.stipitis:154

B9T2I4              	100.00%		A3LYM3              	100.00%
Bootstrap support for B9T2I4 as seed ortholog is 100%.
Bootstrap support for A3LYM3 as seed ortholog is 100%.

Group of orthologs #1169. Best score 153 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:153

B9SYT1              	100.00%		A3LWU4              	100.00%
B9R8D4              	75.44%		
B9R8D3              	73.10%		
B9TGY7              	62.57%		
Bootstrap support for B9SYT1 as seed ortholog is 95%.
Bootstrap support for A3LWU4 as seed ortholog is 100%.

Group of orthologs #1170. Best score 153 bits
Score difference with first non-orthologous sequence - R.communis:153 S.stipitis:153

B9RKV1              	100.00%		A3LS12              	100.00%
                    	       		A3LPP7              	9.42%
Bootstrap support for B9RKV1 as seed ortholog is 100%.
Bootstrap support for A3LS12 as seed ortholog is 100%.

Group of orthologs #1171. Best score 153 bits
Score difference with first non-orthologous sequence - R.communis:153 S.stipitis:14

B9RUR0              	100.00%		A3LVM4              	100.00%
B9SKF5              	55.30%		
Bootstrap support for B9RUR0 as seed ortholog is 100%.
Bootstrap support for A3LVM4 as seed ortholog is 69%.
Alternative seed ortholog is A3LMY0 (14 bits away from this cluster)

Group of orthologs #1172. Best score 153 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:55

B9SM77              	100.00%		A3LZJ4              	100.00%
B9RI09              	65.06%		
Bootstrap support for B9SM77 as seed ortholog is 99%.
Bootstrap support for A3LZJ4 as seed ortholog is 98%.

Group of orthologs #1173. Best score 153 bits
Score difference with first non-orthologous sequence - R.communis:153 S.stipitis:153

B9SPU1              	100.00%		A3LVH4              	100.00%
Bootstrap support for B9SPU1 as seed ortholog is 100%.
Bootstrap support for A3LVH4 as seed ortholog is 100%.

Group of orthologs #1174. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:152 S.stipitis:152

B9RCV2              	100.00%		A3LQA0              	100.00%
B9SBU4              	22.38%		
Bootstrap support for B9RCV2 as seed ortholog is 100%.
Bootstrap support for A3LQA0 as seed ortholog is 100%.

Group of orthologs #1175. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:152 S.stipitis:152

B9SK45              	100.00%		A3LVA8              	100.00%
B9SK39              	42.11%		
Bootstrap support for B9SK45 as seed ortholog is 100%.
Bootstrap support for A3LVA8 as seed ortholog is 100%.

Group of orthologs #1176. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:24

B9SX30              	100.00%		A3LUA5              	100.00%
                    	       		A3GGR1              	80.88%
Bootstrap support for B9SX30 as seed ortholog is 99%.
Bootstrap support for A3LUA5 as seed ortholog is 68%.
Alternative seed ortholog is A3GFB4 (24 bits away from this cluster)

Group of orthologs #1177. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:152 S.stipitis:152

B9RCC0              	100.00%		A3GFU6              	100.00%
Bootstrap support for B9RCC0 as seed ortholog is 100%.
Bootstrap support for A3GFU6 as seed ortholog is 100%.

Group of orthologs #1178. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:152 S.stipitis:152

B9RV45              	100.00%		A3LXS1              	100.00%
Bootstrap support for B9RV45 as seed ortholog is 100%.
Bootstrap support for A3LXS1 as seed ortholog is 100%.

Group of orthologs #1179. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:152 S.stipitis:152

B9SQ77              	100.00%		A3LVC5              	100.00%
Bootstrap support for B9SQ77 as seed ortholog is 100%.
Bootstrap support for A3LVC5 as seed ortholog is 100%.

Group of orthologs #1180. Best score 152 bits
Score difference with first non-orthologous sequence - R.communis:6 S.stipitis:55

B9SSM9              	100.00%		A3LU89              	100.00%
Bootstrap support for B9SSM9 as seed ortholog is 51%.
Alternative seed ortholog is B9S2W6 (6 bits away from this cluster)
Bootstrap support for A3LU89 as seed ortholog is 82%.

Group of orthologs #1181. Best score 151 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:92

B9TEA7              	100.00%		A3LU21              	100.00%
                    	       		A3GG78              	87.96%
                    	       		A3GH10              	85.77%
                    	       		A3GGR3              	74.27%
                    	       		A3LW44              	67.15%
Bootstrap support for B9TEA7 as seed ortholog is 84%.
Bootstrap support for A3LU21 as seed ortholog is 98%.

Group of orthologs #1182. Best score 151 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:151

B9RE76              	100.00%		A3M070              	100.00%
Bootstrap support for B9RE76 as seed ortholog is 100%.
Bootstrap support for A3M070 as seed ortholog is 100%.

Group of orthologs #1183. Best score 151 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:151

B9RQE4              	100.00%		A3LP18              	100.00%
Bootstrap support for B9RQE4 as seed ortholog is 100%.
Bootstrap support for A3LP18 as seed ortholog is 100%.

Group of orthologs #1184. Best score 151 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:151

B9RQT6              	100.00%		A3LZ51              	100.00%
Bootstrap support for B9RQT6 as seed ortholog is 100%.
Bootstrap support for A3LZ51 as seed ortholog is 100%.

Group of orthologs #1185. Best score 151 bits
Score difference with first non-orthologous sequence - R.communis:151 S.stipitis:151

B9SJ33              	100.00%		A3GFV1              	100.00%
Bootstrap support for B9SJ33 as seed ortholog is 100%.
Bootstrap support for A3GFV1 as seed ortholog is 100%.

Group of orthologs #1186. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:150

B9S3F1              	100.00%		A3LXH5              	100.00%
B9REC5              	60.82%		
Bootstrap support for B9S3F1 as seed ortholog is 100%.
Bootstrap support for A3LXH5 as seed ortholog is 100%.

Group of orthologs #1187. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:150

B9RD41              	100.00%		A3LN95              	100.00%
Bootstrap support for B9RD41 as seed ortholog is 100%.
Bootstrap support for A3LN95 as seed ortholog is 100%.

Group of orthologs #1188. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:150

B9RA07              	100.00%		A3LZR3              	100.00%
Bootstrap support for B9RA07 as seed ortholog is 100%.
Bootstrap support for A3LZR3 as seed ortholog is 100%.

Group of orthologs #1189. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:150

B9R9V1              	100.00%		A3M078              	100.00%
Bootstrap support for B9R9V1 as seed ortholog is 100%.
Bootstrap support for A3M078 as seed ortholog is 100%.

Group of orthologs #1190. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:22 S.stipitis:48

B9RT35              	100.00%		A3LVX1              	100.00%
Bootstrap support for B9RT35 as seed ortholog is 85%.
Bootstrap support for A3LVX1 as seed ortholog is 89%.

Group of orthologs #1191. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:150

B9S1Y7              	100.00%		A3LVQ7              	100.00%
Bootstrap support for B9S1Y7 as seed ortholog is 100%.
Bootstrap support for A3LVQ7 as seed ortholog is 100%.

Group of orthologs #1192. Best score 150 bits
Score difference with first non-orthologous sequence - R.communis:150 S.stipitis:150

B9SFZ1              	100.00%		A3LUD5              	100.00%
Bootstrap support for B9SFZ1 as seed ortholog is 100%.
Bootstrap support for A3LUD5 as seed ortholog is 100%.

Group of orthologs #1193. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:149

B9SER7              	100.00%		A3GG48              	100.00%
B9SUZ9              	100.00%		A3GG47              	100.00%
B9SUZ4              	64.73%		
B9SUZ3              	64.73%		
B9RM02              	52.18%		
B9SUZ6              	51.64%		
B9SER6              	32.28%		
B9SUZ7              	32.00%		
B9SUZ5              	26.18%		
B9SUK8              	7.64%		
Bootstrap support for B9SER7 as seed ortholog is 99%.
Bootstrap support for B9SUZ9 as seed ortholog is 97%.
Bootstrap support for A3GG48 as seed ortholog is 100%.
Bootstrap support for A3GG47 as seed ortholog is 100%.

Group of orthologs #1194. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:44

B9R842              	100.00%		A3LWA4              	100.00%
                    	       		A3LU11              	11.87%
Bootstrap support for B9R842 as seed ortholog is 100%.
Bootstrap support for A3LWA4 as seed ortholog is 94%.

Group of orthologs #1195. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:149

B9RQZ5              	100.00%		A3LR86              	100.00%
B9RGU1              	9.24%		
Bootstrap support for B9RQZ5 as seed ortholog is 86%.
Bootstrap support for A3LR86 as seed ortholog is 100%.

Group of orthologs #1196. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:149

B9T6Y0              	100.00%		A3GHM1              	100.00%
B9SSV9              	77.19%		
Bootstrap support for B9T6Y0 as seed ortholog is 100%.
Bootstrap support for A3GHM1 as seed ortholog is 100%.

Group of orthologs #1197. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:149

B9RK71              	100.00%		A3LRC0              	100.00%
Bootstrap support for B9RK71 as seed ortholog is 100%.
Bootstrap support for A3LRC0 as seed ortholog is 100%.

Group of orthologs #1198. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:149

B9RMM9              	100.00%		A3LWT5              	100.00%
Bootstrap support for B9RMM9 as seed ortholog is 100%.
Bootstrap support for A3LWT5 as seed ortholog is 100%.

Group of orthologs #1199. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:95

B9S0S6              	100.00%		A3LR03              	100.00%
Bootstrap support for B9S0S6 as seed ortholog is 100%.
Bootstrap support for A3LR03 as seed ortholog is 99%.

Group of orthologs #1200. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:97

B9SAI2              	100.00%		A3LX68              	100.00%
Bootstrap support for B9SAI2 as seed ortholog is 99%.
Bootstrap support for A3LX68 as seed ortholog is 99%.

Group of orthologs #1201. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:149

B9SLV8              	100.00%		A3LN20              	100.00%
Bootstrap support for B9SLV8 as seed ortholog is 100%.
Bootstrap support for A3LN20 as seed ortholog is 100%.

Group of orthologs #1202. Best score 149 bits
Score difference with first non-orthologous sequence - R.communis:149 S.stipitis:149

B9T1I6              	100.00%		A3LS34              	100.00%
Bootstrap support for B9T1I6 as seed ortholog is 100%.
Bootstrap support for A3LS34 as seed ortholog is 100%.

Group of orthologs #1203. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:26 S.stipitis:8

B9SYE3              	100.00%		A3GGC2              	100.00%
B9SWQ9              	52.38%		
B9S9T3              	33.77%		
B9SRP5              	18.61%		
B9SD43              	15.58%		
B9SGR7              	14.29%		
B9RRE3              	14.29%		
Bootstrap support for B9SYE3 as seed ortholog is 95%.
Bootstrap support for A3GGC2 as seed ortholog is 69%.
Alternative seed ortholog is A3M077 (8 bits away from this cluster)

Group of orthologs #1204. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:6 S.stipitis:59

B9RIV9              	100.00%		A3LPL1              	100.00%
B9RCD5              	63.25%		
B9SUR2              	18.43%		
B9R7I4              	11.43%		
Bootstrap support for B9RIV9 as seed ortholog is 52%.
Alternative seed ortholog is B9S8K4 (6 bits away from this cluster)
Bootstrap support for A3LPL1 as seed ortholog is 95%.

Group of orthologs #1205. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:12 S.stipitis:7

B9RMM7              	100.00%		A3LZU7              	100.00%
B9RAK4              	100.00%		A3LSN6              	100.00%
B9TJ93              	5.23%		
Bootstrap support for B9RMM7 as seed ortholog is 68%.
Alternative seed ortholog is B9SWZ3 (12 bits away from this cluster)
Bootstrap support for B9RAK4 as seed ortholog is 56%.
Alternative seed ortholog is B9SWZ3 (12 bits away from this cluster)
Bootstrap support for A3LZU7 as seed ortholog is 38%.
Alternative seed ortholog is A3GF07 (7 bits away from this cluster)
Bootstrap support for A3LSN6 as seed ortholog is 55%.
Alternative seed ortholog is A3GF07 (7 bits away from this cluster)

Group of orthologs #1206. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:148

B9RGF8              	100.00%		A3LUU3              	100.00%
Bootstrap support for B9RGF8 as seed ortholog is 100%.
Bootstrap support for A3LUU3 as seed ortholog is 100%.

Group of orthologs #1207. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:148

B9S5D8              	100.00%		A3GEZ0              	100.00%
Bootstrap support for B9S5D8 as seed ortholog is 100%.
Bootstrap support for A3GEZ0 as seed ortholog is 100%.

Group of orthologs #1208. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:148

B9SXZ3              	100.00%		A3GGS3              	100.00%
Bootstrap support for B9SXZ3 as seed ortholog is 100%.
Bootstrap support for A3GGS3 as seed ortholog is 100%.

Group of orthologs #1209. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:37

B9T1V1              	100.00%		A3LQ90              	100.00%
Bootstrap support for B9T1V1 as seed ortholog is 100%.
Bootstrap support for A3LQ90 as seed ortholog is 81%.

Group of orthologs #1210. Best score 148 bits
Score difference with first non-orthologous sequence - R.communis:148 S.stipitis:148

B9T797              	100.00%		A3LQ88              	100.00%
Bootstrap support for B9T797 as seed ortholog is 100%.
Bootstrap support for A3LQ88 as seed ortholog is 100%.

Group of orthologs #1211. Best score 147 bits
Score difference with first non-orthologous sequence - R.communis:31 S.stipitis:63

B9RLN9              	100.00%		A3LSY5              	100.00%
Bootstrap support for B9RLN9 as seed ortholog is 71%.
Alternative seed ortholog is B9SJF9 (31 bits away from this cluster)
Bootstrap support for A3LSY5 as seed ortholog is 90%.

Group of orthologs #1212. Best score 147 bits
Score difference with first non-orthologous sequence - R.communis:147 S.stipitis:147

B9S0D2              	100.00%		A3GHS1              	100.00%
Bootstrap support for B9S0D2 as seed ortholog is 100%.
Bootstrap support for A3GHS1 as seed ortholog is 100%.

Group of orthologs #1213. Best score 147 bits
Score difference with first non-orthologous sequence - R.communis:147 S.stipitis:147

B9S842              	100.00%		A3M0F3              	100.00%
Bootstrap support for B9S842 as seed ortholog is 100%.
Bootstrap support for A3M0F3 as seed ortholog is 100%.

Group of orthologs #1214. Best score 146 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:146

B9R714              	100.00%		A3LN46              	100.00%
B9SUX1              	38.22%		
B9RP26              	34.20%		
B9RV89              	33.33%		
Bootstrap support for B9R714 as seed ortholog is 100%.
Bootstrap support for A3LN46 as seed ortholog is 100%.

Group of orthologs #1215. Best score 146 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:52

B9SUV7              	100.00%		A3GF36              	100.00%
B9SUX4              	49.73%		
B9SUV6              	39.59%		
Bootstrap support for B9SUV7 as seed ortholog is 89%.
Bootstrap support for A3GF36 as seed ortholog is 89%.

Group of orthologs #1216. Best score 146 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:146

B9RDF0              	100.00%		A3LW88              	100.00%
Bootstrap support for B9RDF0 as seed ortholog is 100%.
Bootstrap support for A3LW88 as seed ortholog is 100%.

Group of orthologs #1217. Best score 146 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:146

B9RKH3              	100.00%		A3LW50              	100.00%
Bootstrap support for B9RKH3 as seed ortholog is 100%.
Bootstrap support for A3LW50 as seed ortholog is 100%.

Group of orthologs #1218. Best score 146 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:146

B9SG90              	100.00%		A3LVD1              	100.00%
Bootstrap support for B9SG90 as seed ortholog is 100%.
Bootstrap support for A3LVD1 as seed ortholog is 100%.

Group of orthologs #1219. Best score 146 bits
Score difference with first non-orthologous sequence - R.communis:146 S.stipitis:146

B9SG74              	100.00%		A3LYP2              	100.00%
Bootstrap support for B9SG74 as seed ortholog is 100%.
Bootstrap support for A3LYP2 as seed ortholog is 100%.

Group of orthologs #1220. Best score 145 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:56

B9RHS3              	100.00%		A3LWD6              	17.52%
B9SPX0              	100.00%		A3LS16              	100.00%
B9SPA2              	59.16%		A3LWD5              	17.20%
                    	       		A3GFF7              	15.28%
Bootstrap support for B9RHS3 as seed ortholog is 92%.
Bootstrap support for B9SPX0 as seed ortholog is 93%.
Bootstrap support for A3LS16 as seed ortholog is 98%.

Group of orthologs #1221. Best score 145 bits
Score difference with first non-orthologous sequence - R.communis:145 S.stipitis:145

B9RTS0              	100.00%		Q9C1D4              	100.00%
Bootstrap support for B9RTS0 as seed ortholog is 100%.
Bootstrap support for Q9C1D4 as seed ortholog is 100%.

Group of orthologs #1222. Best score 145 bits
Score difference with first non-orthologous sequence - R.communis:145 S.stipitis:145

B9SKC1              	100.00%		A3LU93              	100.00%
Bootstrap support for B9SKC1 as seed ortholog is 100%.
Bootstrap support for A3LU93 as seed ortholog is 100%.

Group of orthologs #1223. Best score 145 bits
Score difference with first non-orthologous sequence - R.communis:145 S.stipitis:145

B9ST92              	100.00%		A3LSS6              	100.00%
Bootstrap support for B9ST92 as seed ortholog is 100%.
Bootstrap support for A3LSS6 as seed ortholog is 100%.

Group of orthologs #1224. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:87

B9S8W8              	100.00%		A3M0M6              	100.00%
B9S8W9              	66.35%		A3LW09              	12.16%
B9T0U1              	37.62%		
B9SZZ0              	21.88%		
B9SLQ2              	19.35%		
B9SLP1              	18.75%		
B9SY73              	18.75%		
B9S0W6              	12.98%		
Bootstrap support for B9S8W8 as seed ortholog is 92%.
Bootstrap support for A3M0M6 as seed ortholog is 98%.

Group of orthologs #1225. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:28 S.stipitis:18

B9RBY8              	100.00%		A3LTW9              	100.00%
B9RDH0              	44.95%		
B9RDG8              	43.51%		
B9RQK9              	27.63%		
B9RQL1              	27.42%		
B9RQL0              	24.12%		
Bootstrap support for B9RBY8 as seed ortholog is 81%.
Bootstrap support for A3LTW9 as seed ortholog is 69%.
Alternative seed ortholog is A3GF73 (18 bits away from this cluster)

Group of orthologs #1226. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

B9S660              	100.00%		A3LZ59              	100.00%
B9S658              	91.79%		
B9RGR6              	58.74%		
B9RE17              	53.26%		
B9RCN0              	46.74%		
B9SZ10              	34.32%		
Bootstrap support for B9S660 as seed ortholog is 100%.
Bootstrap support for A3LZ59 as seed ortholog is 100%.

Group of orthologs #1227. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

B9RF62              	100.00%		A3GIC6              	100.00%
                    	       		A3LR00              	36.58%
Bootstrap support for B9RF62 as seed ortholog is 100%.
Bootstrap support for A3GIC6 as seed ortholog is 100%.

Group of orthologs #1228. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:65

B9T5V7              	100.00%		A3LSL3              	100.00%
B9RGK0              	33.01%		
Bootstrap support for B9T5V7 as seed ortholog is 100%.
Bootstrap support for A3LSL3 as seed ortholog is 93%.

Group of orthologs #1229. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

B9R9V7              	100.00%		A3LX85              	100.00%
Bootstrap support for B9R9V7 as seed ortholog is 100%.
Bootstrap support for A3LX85 as seed ortholog is 100%.

Group of orthologs #1230. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

B9RDY0              	100.00%		A3LZL6              	100.00%
Bootstrap support for B9RDY0 as seed ortholog is 100%.
Bootstrap support for A3LZL6 as seed ortholog is 100%.

Group of orthologs #1231. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

B9S9C7              	100.00%		A3GHZ0              	100.00%
Bootstrap support for B9S9C7 as seed ortholog is 100%.
Bootstrap support for A3GHZ0 as seed ortholog is 100%.

Group of orthologs #1232. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:47 S.stipitis:144

B9SNV7              	100.00%		A3LTL3              	100.00%
Bootstrap support for B9SNV7 as seed ortholog is 81%.
Bootstrap support for A3LTL3 as seed ortholog is 100%.

Group of orthologs #1233. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

B9SJD1              	100.00%		A3LZL4              	100.00%
Bootstrap support for B9SJD1 as seed ortholog is 100%.
Bootstrap support for A3LZL4 as seed ortholog is 100%.

Group of orthologs #1234. Best score 144 bits
Score difference with first non-orthologous sequence - R.communis:144 S.stipitis:144

G1D799              	100.00%		A3LNH9              	100.00%
Bootstrap support for G1D799 as seed ortholog is 100%.
Bootstrap support for A3LNH9 as seed ortholog is 100%.

Group of orthologs #1235. Best score 143 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:143

B9RVK9              	100.00%		A3LRZ1              	100.00%
B9RVL9              	82.58%		A3LWG4              	40.04%
B9RVK7              	54.01%		A3GH15              	35.55%
B9RVK8              	31.90%		A3LTD2              	35.35%
B9SMT3              	27.79%		A3LN54              	35.35%
B9SC77              	25.44%		A3LNV4              	34.96%
B9SKV5              	24.66%		A3LS83              	32.81%
B9T062              	21.92%		A3LZM3              	30.47%
B9R8T8              	17.03%		A3LWY5              	27.73%
B9R8T7              	16.83%		
B9R8T6              	16.44%		
B9S058              	14.09%		
Bootstrap support for B9RVK9 as seed ortholog is 99%.
Bootstrap support for A3LRZ1 as seed ortholog is 100%.

Group of orthologs #1236. Best score 143 bits
Score difference with first non-orthologous sequence - R.communis:143 S.stipitis:143

B9S4D5              	100.00%		A3LRP1              	100.00%
B9S2T1              	97.08%		
B9T7A0              	91.24%		
Bootstrap support for B9S4D5 as seed ortholog is 100%.
Bootstrap support for A3LRP1 as seed ortholog is 100%.

Group of orthologs #1237. Best score 143 bits
Score difference with first non-orthologous sequence - R.communis:143 S.stipitis:143

B9RD11              	100.00%		A3LW35              	100.00%
B9SZP9              	48.33%		
Bootstrap support for B9RD11 as seed ortholog is 100%.
Bootstrap support for A3LW35 as seed ortholog is 100%.

Group of orthologs #1238. Best score 143 bits
Score difference with first non-orthologous sequence - R.communis:143 S.stipitis:143

B9SS73              	100.00%		O13393              	100.00%
B9RFB0              	81.72%		
Bootstrap support for B9SS73 as seed ortholog is 100%.
Bootstrap support for O13393 as seed ortholog is 100%.

Group of orthologs #1239. Best score 143 bits
Score difference with first non-orthologous sequence - R.communis:143 S.stipitis:143

B9RS50              	100.00%		A3LRK6              	100.00%
Bootstrap support for B9RS50 as seed ortholog is 100%.
Bootstrap support for A3LRK6 as seed ortholog is 100%.

Group of orthologs #1240. Best score 143 bits
Score difference with first non-orthologous sequence - R.communis:143 S.stipitis:143

B9RJT0              	100.00%		A3LZN7              	100.00%
Bootstrap support for B9RJT0 as seed ortholog is 100%.
Bootstrap support for A3LZN7 as seed ortholog is 100%.

Group of orthologs #1241. Best score 142 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:142

B9RI41              	100.00%		A3GHY7              	100.00%
B9T281              	72.87%		
Bootstrap support for B9RI41 as seed ortholog is 99%.
Bootstrap support for A3GHY7 as seed ortholog is 100%.

Group of orthologs #1242. Best score 142 bits
Score difference with first non-orthologous sequence - R.communis:142 S.stipitis:142

B9S7R8              	100.00%		A3GFS4              	100.00%
                    	       		A3LV36              	6.61%
Bootstrap support for B9S7R8 as seed ortholog is 100%.
Bootstrap support for A3GFS4 as seed ortholog is 100%.

Group of orthologs #1243. Best score 142 bits
Score difference with first non-orthologous sequence - R.communis:142 S.stipitis:142

B9RNK2              	100.00%		A3LP33              	100.00%
Bootstrap support for B9RNK2 as seed ortholog is 100%.
Bootstrap support for A3LP33 as seed ortholog is 100%.

Group of orthologs #1244. Best score 142 bits
Score difference with first non-orthologous sequence - R.communis:142 S.stipitis:142

B9RSB9              	100.00%		A3LMZ3              	100.00%
Bootstrap support for B9RSB9 as seed ortholog is 100%.
Bootstrap support for A3LMZ3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 141 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:141

B9SH50              	100.00%		A3LVA1              	100.00%
B9RXF0              	35.52%		
Bootstrap support for B9SH50 as seed ortholog is 100%.
Bootstrap support for A3LVA1 as seed ortholog is 100%.

Group of orthologs #1246. Best score 141 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:92

B9RE79              	100.00%		A3LPD4              	100.00%
Bootstrap support for B9RE79 as seed ortholog is 96%.
Bootstrap support for A3LPD4 as seed ortholog is 97%.

Group of orthologs #1247. Best score 141 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:141

B9RTT3              	100.00%		A3GHA8              	100.00%
Bootstrap support for B9RTT3 as seed ortholog is 100%.
Bootstrap support for A3GHA8 as seed ortholog is 100%.

Group of orthologs #1248. Best score 141 bits
Score difference with first non-orthologous sequence - R.communis:141 S.stipitis:141

B9SH02              	100.00%		A3LR81              	100.00%
Bootstrap support for B9SH02 as seed ortholog is 100%.
Bootstrap support for A3LR81 as seed ortholog is 100%.

Group of orthologs #1249. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:56

B9RFH6              	100.00%		A3LZX8              	100.00%
B9RNH0              	100.00%		
Bootstrap support for B9RFH6 as seed ortholog is 100%.
Bootstrap support for B9RNH0 as seed ortholog is 100%.
Bootstrap support for A3LZX8 as seed ortholog is 92%.

Group of orthologs #1250. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:140

B9S183              	100.00%		A3LV31              	100.00%
B9T5H6              	96.12%		
Bootstrap support for B9S183 as seed ortholog is 100%.
Bootstrap support for A3LV31 as seed ortholog is 100%.

Group of orthologs #1251. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:140

B9SHI5              	100.00%		A3LXS4              	100.00%
B9SBM9              	36.74%		
Bootstrap support for B9SHI5 as seed ortholog is 100%.
Bootstrap support for A3LXS4 as seed ortholog is 100%.

Group of orthologs #1252. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:91

B9R702              	100.00%		A3LUE8              	100.00%
Bootstrap support for B9R702 as seed ortholog is 100%.
Bootstrap support for A3LUE8 as seed ortholog is 98%.

Group of orthologs #1253. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:140

B9RLT7              	100.00%		A3LVV8              	100.00%
Bootstrap support for B9RLT7 as seed ortholog is 97%.
Bootstrap support for A3LVV8 as seed ortholog is 100%.

Group of orthologs #1254. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:8

B9SI02              	100.00%		A3LX69              	100.00%
Bootstrap support for B9SI02 as seed ortholog is 100%.
Bootstrap support for A3LX69 as seed ortholog is 57%.
Alternative seed ortholog is A3GI03 (8 bits away from this cluster)

Group of orthologs #1255. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:140

B9SWC4              	100.00%		A3LRB3              	100.00%
Bootstrap support for B9SWC4 as seed ortholog is 100%.
Bootstrap support for A3LRB3 as seed ortholog is 100%.

Group of orthologs #1256. Best score 140 bits
Score difference with first non-orthologous sequence - R.communis:140 S.stipitis:140

B9T4L9              	100.00%		A3GF63              	100.00%
Bootstrap support for B9T4L9 as seed ortholog is 100%.
Bootstrap support for A3GF63 as seed ortholog is 100%.

Group of orthologs #1257. Best score 139 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:76

B9S595              	100.00%		A3GF87              	100.00%
B9RWS2              	74.49%		
B9RS61              	54.71%		
B9RPC4              	49.52%		
B9RKR3              	49.39%		
B9S2N5              	30.29%		
B9S2N4              	30.29%		
B9S3X0              	28.24%		
B9SSP7              	25.24%		
B9RK23              	7.78%		
Bootstrap support for B9S595 as seed ortholog is 97%.
Bootstrap support for A3GF87 as seed ortholog is 96%.

Group of orthologs #1258. Best score 139 bits
Score difference with first non-orthologous sequence - R.communis:139 S.stipitis:139

B9S4H1              	100.00%		A3LRC5              	100.00%
B9SRT6              	41.36%		
B9SF13              	21.94%		
Bootstrap support for B9S4H1 as seed ortholog is 100%.
Bootstrap support for A3LRC5 as seed ortholog is 100%.

Group of orthologs #1259. Best score 139 bits
Score difference with first non-orthologous sequence - R.communis:139 S.stipitis:139

B9RLA4              	100.00%		A3LQW0              	100.00%
B9T887              	24.21%		
Bootstrap support for B9RLA4 as seed ortholog is 100%.
Bootstrap support for A3LQW0 as seed ortholog is 100%.

Group of orthologs #1260. Best score 139 bits
Score difference with first non-orthologous sequence - R.communis:139 S.stipitis:139

B9R8W5              	100.00%		A3LXJ4              	100.00%
Bootstrap support for B9R8W5 as seed ortholog is 100%.
Bootstrap support for A3LXJ4 as seed ortholog is 100%.

Group of orthologs #1261. Best score 139 bits
Score difference with first non-orthologous sequence - R.communis:139 S.stipitis:139

B9T3F2              	100.00%		A3LQN8              	100.00%
Bootstrap support for B9T3F2 as seed ortholog is 100%.
Bootstrap support for A3LQN8 as seed ortholog is 100%.

Group of orthologs #1262. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:42

B9RIK1              	100.00%		A3LRS9              	100.00%
B9RCS1              	32.07%		
B9SDZ6              	25.41%		
B9RKI2              	20.90%		
B9R9K8              	19.46%		
B9S5U9              	19.28%		
B9RQT1              	19.28%		
B9RK51              	18.92%		
B9S3D7              	15.14%		
B9S2N7              	7.57%		
B9RNR4              	6.31%		
Bootstrap support for B9RIK1 as seed ortholog is 70%.
Alternative seed ortholog is B9RKV0 (19 bits away from this cluster)
Bootstrap support for A3LRS9 as seed ortholog is 83%.

Group of orthologs #1263. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9RYU0              	100.00%		A3LYI3              	100.00%
B9T6L2              	9.41%		A3LXL2              	8.15%
B9T6L4              	8.87%		
B9SLH9              	5.46%		
Bootstrap support for B9RYU0 as seed ortholog is 100%.
Bootstrap support for A3LYI3 as seed ortholog is 100%.

Group of orthologs #1264. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9T579              	100.00%		A3LYH2              	100.00%
B9RJ83              	16.82%		
B9RNW7              	6.42%		
Bootstrap support for B9T579 as seed ortholog is 100%.
Bootstrap support for A3LYH2 as seed ortholog is 100%.

Group of orthologs #1265. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9R870              	100.00%		A3GI41              	100.00%
B9RTI9              	71.15%		
Bootstrap support for B9R870 as seed ortholog is 100%.
Bootstrap support for A3GI41 as seed ortholog is 100%.

Group of orthologs #1266. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9S6A5              	100.00%		A3LUJ7              	100.00%
B9RKC9              	89.90%		
Bootstrap support for B9S6A5 as seed ortholog is 100%.
Bootstrap support for A3LUJ7 as seed ortholog is 100%.

Group of orthologs #1267. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9RBN0              	100.00%		A3GHQ3              	100.00%
Bootstrap support for B9RBN0 as seed ortholog is 100%.
Bootstrap support for A3GHQ3 as seed ortholog is 100%.

Group of orthologs #1268. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9RR29              	100.00%		A3LRT7              	100.00%
Bootstrap support for B9RR29 as seed ortholog is 100%.
Bootstrap support for A3LRT7 as seed ortholog is 100%.

Group of orthologs #1269. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:138 S.stipitis:138

B9SBV7              	100.00%		A3LZH4              	100.00%
Bootstrap support for B9SBV7 as seed ortholog is 100%.
Bootstrap support for A3LZH4 as seed ortholog is 100%.

Group of orthologs #1270. Best score 138 bits
Score difference with first non-orthologous sequence - R.communis:39 S.stipitis:138

B9T615              	100.00%		A3LSM9              	100.00%
Bootstrap support for B9T615 as seed ortholog is 90%.
Bootstrap support for A3LSM9 as seed ortholog is 100%.

Group of orthologs #1271. Best score 137 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:137

B9RNL3              	100.00%		A3LTE1              	100.00%
B9S3C6              	24.60%		
Bootstrap support for B9RNL3 as seed ortholog is 83%.
Bootstrap support for A3LTE1 as seed ortholog is 100%.

Group of orthologs #1272. Best score 137 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:137

B9RRW3              	100.00%		A3LUL4              	100.00%
B9T362              	17.28%		
Bootstrap support for B9RRW3 as seed ortholog is 100%.
Bootstrap support for A3LUL4 as seed ortholog is 100%.

Group of orthologs #1273. Best score 137 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:137

B9THP4              	100.00%		A3LQW3              	100.00%
B9TD76              	18.03%		
Bootstrap support for B9THP4 as seed ortholog is 100%.
Bootstrap support for A3LQW3 as seed ortholog is 100%.

Group of orthologs #1274. Best score 137 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:137

B9RH81              	100.00%		A3LRG3              	100.00%
Bootstrap support for B9RH81 as seed ortholog is 100%.
Bootstrap support for A3LRG3 as seed ortholog is 100%.

Group of orthologs #1275. Best score 137 bits
Score difference with first non-orthologous sequence - R.communis:137 S.stipitis:137

B9S544              	100.00%		A3LQZ2              	100.00%
Bootstrap support for B9S544 as seed ortholog is 100%.
Bootstrap support for A3LQZ2 as seed ortholog is 100%.

Group of orthologs #1276. Best score 136 bits
Score difference with first non-orthologous sequence - R.communis:136 S.stipitis:136

B9REQ4              	100.00%		A3LP13              	100.00%
B9SKS7              	37.53%		
Bootstrap support for B9REQ4 as seed ortholog is 100%.
Bootstrap support for A3LP13 as seed ortholog is 100%.

Group of orthologs #1277. Best score 136 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:136

B9RTY0              	100.00%		A3LUT3              	100.00%
B9RF57              	51.02%		
Bootstrap support for B9RTY0 as seed ortholog is 88%.
Bootstrap support for A3LUT3 as seed ortholog is 100%.

Group of orthologs #1278. Best score 136 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:136

B9SB22              	100.00%		A3LTC4              	100.00%
Bootstrap support for B9SB22 as seed ortholog is 99%.
Bootstrap support for A3LTC4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 136 bits
Score difference with first non-orthologous sequence - R.communis:136 S.stipitis:136

B9SY14              	100.00%		A3LSC1              	100.00%
Bootstrap support for B9SY14 as seed ortholog is 100%.
Bootstrap support for A3LSC1 as seed ortholog is 100%.

Group of orthologs #1280. Best score 136 bits
Score difference with first non-orthologous sequence - R.communis:136 S.stipitis:136

B9ST66              	100.00%		A3M0A8              	100.00%
Bootstrap support for B9ST66 as seed ortholog is 100%.
Bootstrap support for A3M0A8 as seed ortholog is 100%.

Group of orthologs #1281. Best score 136 bits
Score difference with first non-orthologous sequence - R.communis:136 S.stipitis:136

B9T1U0              	100.00%		A3LYT4              	100.00%
Bootstrap support for B9T1U0 as seed ortholog is 100%.
Bootstrap support for A3LYT4 as seed ortholog is 100%.

Group of orthologs #1282. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:135 S.stipitis:135

B9RFQ9              	100.00%		A3M0E3              	100.00%
B9RN43              	58.40%		A3LX34              	43.93%
Bootstrap support for B9RFQ9 as seed ortholog is 100%.
Bootstrap support for A3M0E3 as seed ortholog is 100%.

Group of orthologs #1283. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:135 S.stipitis:135

B9RTK5              	100.00%		A3GFN2              	100.00%
B9RTK2              	55.68%		
Bootstrap support for B9RTK5 as seed ortholog is 100%.
Bootstrap support for A3GFN2 as seed ortholog is 100%.

Group of orthologs #1284. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:135 S.stipitis:135

B9RKG8              	100.00%		A3GEW1              	100.00%
Bootstrap support for B9RKG8 as seed ortholog is 100%.
Bootstrap support for A3GEW1 as seed ortholog is 100%.

Group of orthologs #1285. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:135 S.stipitis:135

B9RJD9              	100.00%		A3GH50              	100.00%
Bootstrap support for B9RJD9 as seed ortholog is 100%.
Bootstrap support for A3GH50 as seed ortholog is 100%.

Group of orthologs #1286. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:135 S.stipitis:135

B9RW74              	100.00%		A3LXP9              	100.00%
Bootstrap support for B9RW74 as seed ortholog is 100%.
Bootstrap support for A3LXP9 as seed ortholog is 100%.

Group of orthologs #1287. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:22 S.stipitis:135

B9S6W1              	100.00%		A3LNL6              	100.00%
Bootstrap support for B9S6W1 as seed ortholog is 85%.
Bootstrap support for A3LNL6 as seed ortholog is 100%.

Group of orthologs #1288. Best score 135 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:135

B9SFA5              	100.00%		A3LPP9              	100.00%
Bootstrap support for B9SFA5 as seed ortholog is 93%.
Bootstrap support for A3LPP9 as seed ortholog is 100%.

Group of orthologs #1289. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:55

B9SE95              	100.00%		A3LXI5              	100.00%
B9T3F4              	52.51%		
B9RH32              	41.90%		
B9RA99              	39.25%		
B9RG24              	34.22%		
B9SCF7              	29.61%		
B9SCF5              	19.55%		
B9SDX0              	11.17%		
Bootstrap support for B9SE95 as seed ortholog is 88%.
Bootstrap support for A3LXI5 as seed ortholog is 93%.

Group of orthologs #1290. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:67 S.stipitis:134

B9RA16              	100.00%		A3M0M8              	100.00%
B9RA13              	87.50%		
B9T0A6              	50.00%		
B9SIM4              	37.20%		
Bootstrap support for B9RA16 as seed ortholog is 99%.
Bootstrap support for A3M0M8 as seed ortholog is 100%.

Group of orthologs #1291. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9SIZ7              	100.00%		A3LQK8              	100.00%
B9SEH0              	41.51%		
B9S1S4              	15.44%		
Bootstrap support for B9SIZ7 as seed ortholog is 100%.
Bootstrap support for A3LQK8 as seed ortholog is 100%.

Group of orthologs #1292. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9SJC5              	100.00%		A3LZU1              	100.00%
B9SJC6              	98.73%		
B9S5F0              	92.41%		
Bootstrap support for B9SJC5 as seed ortholog is 100%.
Bootstrap support for A3LZU1 as seed ortholog is 100%.

Group of orthologs #1293. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9RSC5              	100.00%		A3GH31              	100.00%
B9SWY4              	9.76%		
Bootstrap support for B9RSC5 as seed ortholog is 100%.
Bootstrap support for A3GH31 as seed ortholog is 100%.

Group of orthologs #1294. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9SPP4              	100.00%		A3LSH1              	100.00%
                    	       		A3GG06              	10.72%
Bootstrap support for B9SPP4 as seed ortholog is 100%.
Bootstrap support for A3LSH1 as seed ortholog is 100%.

Group of orthologs #1295. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9T039              	100.00%		A3LUI1              	100.00%
                    	       		A3GFS9              	37.66%
Bootstrap support for B9T039 as seed ortholog is 100%.
Bootstrap support for A3LUI1 as seed ortholog is 100%.

Group of orthologs #1296. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9R9P7              	100.00%		A3LZ30              	100.00%
Bootstrap support for B9R9P7 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #1297. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:32 S.stipitis:134

B9RM89              	100.00%		A3LQL5              	100.00%
Bootstrap support for B9RM89 as seed ortholog is 88%.
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #1298. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:13

B9RWK5              	100.00%		A3LXN3              	100.00%
Bootstrap support for B9RWK5 as seed ortholog is 100%.
Bootstrap support for A3LXN3 as seed ortholog is 71%.
Alternative seed ortholog is A3LT44 (13 bits away from this cluster)

Group of orthologs #1299. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9S4F8              	100.00%		A3LQV6              	100.00%
Bootstrap support for B9S4F8 as seed ortholog is 100%.
Bootstrap support for A3LQV6 as seed ortholog is 100%.

Group of orthologs #1300. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:134

B9S8F4              	100.00%		A3LNJ1              	100.00%
Bootstrap support for B9S8F4 as seed ortholog is 100%.
Bootstrap support for A3LNJ1 as seed ortholog is 100%.

Group of orthologs #1301. Best score 134 bits
Score difference with first non-orthologous sequence - R.communis:134 S.stipitis:86

B9SIY8              	100.00%		A3LZB3              	100.00%
Bootstrap support for B9SIY8 as seed ortholog is 100%.
Bootstrap support for A3LZB3 as seed ortholog is 98%.

Group of orthologs #1302. Best score 133 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:24

B9T4V4              	100.00%		A3LPV6              	100.00%
B9S3L9              	5.16%		A3LU69              	10.28%
Bootstrap support for B9T4V4 as seed ortholog is 97%.
Bootstrap support for A3LPV6 as seed ortholog is 92%.

Group of orthologs #1303. Best score 133 bits
Score difference with first non-orthologous sequence - R.communis:133 S.stipitis:133

B9TET3              	100.00%		A3LPY1              	100.00%
B9TGQ7              	56.47%		A3LPY2              	13.35%
Bootstrap support for B9TET3 as seed ortholog is 100%.
Bootstrap support for A3LPY1 as seed ortholog is 100%.

Group of orthologs #1304. Best score 133 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:87

B9S5B2              	100.00%		A3LTG5              	100.00%
B9SRX1              	100.00%		
Bootstrap support for B9S5B2 as seed ortholog is 99%.
Bootstrap support for B9SRX1 as seed ortholog is 99%.
Bootstrap support for A3LTG5 as seed ortholog is 99%.

Group of orthologs #1305. Best score 133 bits
Score difference with first non-orthologous sequence - R.communis:133 S.stipitis:133

B9SSM2              	100.00%		A3LS70              	100.00%
B9RUQ4              	82.47%		
Bootstrap support for B9SSM2 as seed ortholog is 100%.
Bootstrap support for A3LS70 as seed ortholog is 100%.

Group of orthologs #1306. Best score 133 bits
Score difference with first non-orthologous sequence - R.communis:133 S.stipitis:133

B9R9F9              	100.00%		A3LVF6              	100.00%
Bootstrap support for B9R9F9 as seed ortholog is 100%.
Bootstrap support for A3LVF6 as seed ortholog is 100%.

Group of orthologs #1307. Best score 133 bits
Score difference with first non-orthologous sequence - R.communis:133 S.stipitis:133

B9RIR8              	100.00%		A3M097              	100.00%
Bootstrap support for B9RIR8 as seed ortholog is 100%.
Bootstrap support for A3M097 as seed ortholog is 100%.

Group of orthologs #1308. Best score 132 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:132

B9SSJ7              	100.00%		A3GI73              	100.00%
B9SSJ8              	47.90%		A3LMU3              	19.41%
Q1XBG1              	47.16%		
B9RY83              	30.09%		
B9SSJ6              	29.79%		
Bootstrap support for B9SSJ7 as seed ortholog is 100%.
Bootstrap support for A3GI73 as seed ortholog is 100%.

Group of orthologs #1309. Best score 132 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:132

B9S455              	100.00%		A3LT25              	100.00%
B9SEV0              	22.28%		
B9S454              	22.00%		
Bootstrap support for B9S455 as seed ortholog is 100%.
Bootstrap support for A3LT25 as seed ortholog is 100%.

Group of orthologs #1310. Best score 132 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:132

B9R9N7              	100.00%		A3LX64              	100.00%
B9RL64              	7.13%		
Bootstrap support for B9R9N7 as seed ortholog is 100%.
Bootstrap support for A3LX64 as seed ortholog is 100%.

Group of orthologs #1311. Best score 132 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:132

B9RUR2              	100.00%		A3LVS4              	100.00%
B9SKF7              	100.00%		
Bootstrap support for B9RUR2 as seed ortholog is 100%.
Bootstrap support for B9SKF7 as seed ortholog is 100%.
Bootstrap support for A3LVS4 as seed ortholog is 100%.

Group of orthologs #1312. Best score 132 bits
Score difference with first non-orthologous sequence - R.communis:132 S.stipitis:132

B9RGX2              	100.00%		A3GG95              	100.00%
Bootstrap support for B9RGX2 as seed ortholog is 100%.
Bootstrap support for A3GG95 as seed ortholog is 100%.

Group of orthologs #1313. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:131 S.stipitis:131

B9SZM9              	100.00%		A3LS56              	100.00%
B9SUI3              	100.00%		A3GH73              	100.00%
B9SWU7              	46.87%		A3LN43              	16.07%
B9RAE5              	23.88%		
B9RBG8              	23.79%		
B9SCJ3              	20.53%		
B9S0E6              	20.32%		
B9R924              	18.95%		
B9S0E5              	18.53%		
B9T6Z5              	18.11%		
B9R925              	17.89%		
B9S0E7              	16.42%		
B9RVI0              	15.05%		
B9SDB3              	14.84%		
B9S1N5              	13.26%		
Bootstrap support for B9SZM9 as seed ortholog is 100%.
Bootstrap support for B9SUI3 as seed ortholog is 100%.
Bootstrap support for A3LS56 as seed ortholog is 100%.
Bootstrap support for A3GH73 as seed ortholog is 100%.

Group of orthologs #1314. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:9 S.stipitis:23

B9SHH2              	100.00%		A3LXZ8              	100.00%
B9SHH3              	100.00%		A3LUE6              	100.00%
B9SHI0              	59.09%		
Bootstrap support for B9SHH2 as seed ortholog is 60%.
Alternative seed ortholog is B9TF21 (9 bits away from this cluster)
Bootstrap support for B9SHH3 as seed ortholog is 51%.
Alternative seed ortholog is B9TF21 (9 bits away from this cluster)
Bootstrap support for A3LXZ8 as seed ortholog is 73%.
Alternative seed ortholog is A3GF05 (23 bits away from this cluster)
Bootstrap support for A3LUE6 as seed ortholog is 70%.
Alternative seed ortholog is A3GF05 (23 bits away from this cluster)

Group of orthologs #1315. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:131 S.stipitis:131

B9RFQ0              	100.00%		A3LV07              	100.00%
B9RN70              	13.26%		
Bootstrap support for B9RFQ0 as seed ortholog is 100%.
Bootstrap support for A3LV07 as seed ortholog is 100%.

Group of orthologs #1316. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:131 S.stipitis:131

B9RFB8              	100.00%		A3LXS7              	100.00%
B9RT61              	85.92%		
Bootstrap support for B9RFB8 as seed ortholog is 100%.
Bootstrap support for A3LXS7 as seed ortholog is 100%.

Group of orthologs #1317. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:131

B9RQN1              	100.00%		A3LNK5              	100.00%
B9RS60              	100.00%		
Bootstrap support for B9RQN1 as seed ortholog is 99%.
Bootstrap support for B9RS60 as seed ortholog is 99%.
Bootstrap support for A3LNK5 as seed ortholog is 100%.

Group of orthologs #1318. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:131 S.stipitis:131

B9S412              	100.00%		A3LQL1              	100.00%
Bootstrap support for B9S412 as seed ortholog is 100%.
Bootstrap support for A3LQL1 as seed ortholog is 100%.

Group of orthologs #1319. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:131 S.stipitis:131

B9SX55              	100.00%		A3GGF1              	100.00%
Bootstrap support for B9SX55 as seed ortholog is 100%.
Bootstrap support for A3GGF1 as seed ortholog is 100%.

Group of orthologs #1320. Best score 131 bits
Score difference with first non-orthologous sequence - R.communis:8 S.stipitis:45

B9TEA6              	100.00%		A3LXB2              	100.00%
Bootstrap support for B9TEA6 as seed ortholog is 43%.
Alternative seed ortholog is B9TMR5 (8 bits away from this cluster)
Bootstrap support for A3LXB2 as seed ortholog is 92%.

Group of orthologs #1321. Best score 130 bits
Score difference with first non-orthologous sequence - R.communis:130 S.stipitis:130

B9RMD1              	100.00%		A3LPL5              	100.00%
B9RXQ5              	24.39%		
Bootstrap support for B9RMD1 as seed ortholog is 100%.
Bootstrap support for A3LPL5 as seed ortholog is 100%.

Group of orthologs #1322. Best score 130 bits
Score difference with first non-orthologous sequence - R.communis:130 S.stipitis:130

B9RC94              	100.00%		A3LPY3              	100.00%
Bootstrap support for B9RC94 as seed ortholog is 100%.
Bootstrap support for A3LPY3 as seed ortholog is 100%.

Group of orthologs #1323. Best score 130 bits
Score difference with first non-orthologous sequence - R.communis:130 S.stipitis:130

B9RBB7              	100.00%		A3LRZ3              	100.00%
Bootstrap support for B9RBB7 as seed ortholog is 100%.
Bootstrap support for A3LRZ3 as seed ortholog is 100%.

Group of orthologs #1324. Best score 130 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:130

B9RQS7              	100.00%		A3LTY1              	100.00%
Bootstrap support for B9RQS7 as seed ortholog is 99%.
Bootstrap support for A3LTY1 as seed ortholog is 100%.

Group of orthologs #1325. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:26

B9SJW9              	100.00%		A3LWJ3              	100.00%
B9SQ05              	63.31%		A3LNJ5              	11.05%
B9SJX0              	53.61%		A3GHR3              	9.27%
B9SFW1              	46.77%		
Bootstrap support for B9SJW9 as seed ortholog is 100%.
Bootstrap support for A3LWJ3 as seed ortholog is 78%.

Group of orthologs #1326. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:129

B9R7T6              	100.00%		A3LXJ3              	100.00%
B9S6H8              	63.18%		A3LND9              	36.47%
B9RJH0              	33.05%		
B9SY98              	19.46%		
Bootstrap support for B9R7T6 as seed ortholog is 96%.
Bootstrap support for A3LXJ3 as seed ortholog is 100%.

Group of orthologs #1327. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9SVJ2              	100.00%		A3LNU7              	100.00%
B9RLV4              	73.29%		
B9S915              	55.82%		
Bootstrap support for B9SVJ2 as seed ortholog is 100%.
Bootstrap support for A3LNU7 as seed ortholog is 100%.

Group of orthologs #1328. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9RXP9              	100.00%		A3LV52              	100.00%
B9SRH1              	6.85%		
Bootstrap support for B9RXP9 as seed ortholog is 100%.
Bootstrap support for A3LV52 as seed ortholog is 100%.

Group of orthologs #1329. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9SA38              	100.00%		A3LVH2              	100.00%
B9T2U2              	100.00%		
Bootstrap support for B9SA38 as seed ortholog is 100%.
Bootstrap support for B9T2U2 as seed ortholog is 100%.
Bootstrap support for A3LVH2 as seed ortholog is 100%.

Group of orthologs #1330. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9SRL5              	100.00%		A3LS71              	100.00%
B9RC45              	68.33%		
Bootstrap support for B9SRL5 as seed ortholog is 100%.
Bootstrap support for A3LS71 as seed ortholog is 100%.

Group of orthologs #1331. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9RB57              	100.00%		A3LV77              	100.00%
Bootstrap support for B9RB57 as seed ortholog is 100%.
Bootstrap support for A3LV77 as seed ortholog is 100%.

Group of orthologs #1332. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9R9L4              	100.00%		A3LYP0              	100.00%
Bootstrap support for B9R9L4 as seed ortholog is 100%.
Bootstrap support for A3LYP0 as seed ortholog is 100%.

Group of orthologs #1333. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:129

B9S876              	100.00%		A3GG65              	100.00%
Bootstrap support for B9S876 as seed ortholog is 99%.
Bootstrap support for A3GG65 as seed ortholog is 100%.

Group of orthologs #1334. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:34 S.stipitis:57

B9SC54              	100.00%		A3M0A3              	100.00%
Bootstrap support for B9SC54 as seed ortholog is 95%.
Bootstrap support for A3M0A3 as seed ortholog is 99%.

Group of orthologs #1335. Best score 129 bits
Score difference with first non-orthologous sequence - R.communis:129 S.stipitis:129

B9SP62              	100.00%		A3LXD7              	100.00%
Bootstrap support for B9SP62 as seed ortholog is 100%.
Bootstrap support for A3LXD7 as seed ortholog is 100%.

Group of orthologs #1336. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9T1J2              	100.00%		A3LVZ2              	100.00%
B9SI42              	99.15%		
B9SI41              	95.73%		
Bootstrap support for B9T1J2 as seed ortholog is 100%.
Bootstrap support for A3LVZ2 as seed ortholog is 100%.

Group of orthologs #1337. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9T739              	100.00%		A3GFL2              	100.00%
B9S8W0              	98.18%		
Bootstrap support for B9T739 as seed ortholog is 100%.
Bootstrap support for A3GFL2 as seed ortholog is 100%.

Group of orthologs #1338. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:128

B9SZP0              	100.00%		A3LTN1              	100.00%
B9RKI5              	38.19%		
Bootstrap support for B9SZP0 as seed ortholog is 97%.
Bootstrap support for A3LTN1 as seed ortholog is 100%.

Group of orthologs #1339. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9RUP0              	100.00%		A3GGK9              	100.00%
Bootstrap support for B9RUP0 as seed ortholog is 100%.
Bootstrap support for A3GGK9 as seed ortholog is 100%.

Group of orthologs #1340. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9S4T0              	100.00%		A3GFY9              	100.00%
Bootstrap support for B9S4T0 as seed ortholog is 100%.
Bootstrap support for A3GFY9 as seed ortholog is 100%.

Group of orthologs #1341. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9RZ35              	100.00%		A3LTY3              	100.00%
Bootstrap support for B9RZ35 as seed ortholog is 100%.
Bootstrap support for A3LTY3 as seed ortholog is 100%.

Group of orthologs #1342. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9S7V3              	100.00%		A3LT60              	100.00%
Bootstrap support for B9S7V3 as seed ortholog is 100%.
Bootstrap support for A3LT60 as seed ortholog is 100%.

Group of orthologs #1343. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9SQW0              	100.00%		A3GHS6              	100.00%
Bootstrap support for B9SQW0 as seed ortholog is 100%.
Bootstrap support for A3GHS6 as seed ortholog is 100%.

Group of orthologs #1344. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:128

B9SU49              	100.00%		A3GI10              	100.00%
Bootstrap support for B9SU49 as seed ortholog is 91%.
Bootstrap support for A3GI10 as seed ortholog is 100%.

Group of orthologs #1345. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9STA6              	100.00%		A3LQU0              	100.00%
Bootstrap support for B9STA6 as seed ortholog is 100%.
Bootstrap support for A3LQU0 as seed ortholog is 100%.

Group of orthologs #1346. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:43

B9T5D3              	100.00%		A3LQP3              	100.00%
Bootstrap support for B9T5D3 as seed ortholog is 95%.
Bootstrap support for A3LQP3 as seed ortholog is 94%.

Group of orthologs #1347. Best score 128 bits
Score difference with first non-orthologous sequence - R.communis:128 S.stipitis:128

B9T580              	100.00%		A3LTX8              	100.00%
Bootstrap support for B9T580 as seed ortholog is 100%.
Bootstrap support for A3LTX8 as seed ortholog is 100%.

Group of orthologs #1348. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:127 S.stipitis:127

B9RDD0              	100.00%		A3LPF8              	100.00%
B9RBT6              	63.46%		
B9RDR5              	50.57%		
Bootstrap support for B9RDD0 as seed ortholog is 100%.
Bootstrap support for A3LPF8 as seed ortholog is 100%.

Group of orthologs #1349. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:127 S.stipitis:127

B9SAT6              	100.00%		A3LS60              	100.00%
B9SJM9              	47.09%		
Bootstrap support for B9SAT6 as seed ortholog is 100%.
Bootstrap support for A3LS60 as seed ortholog is 100%.

Group of orthologs #1350. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:127 S.stipitis:127

B9RC32              	100.00%		A3LVF4              	100.00%
Bootstrap support for B9RC32 as seed ortholog is 100%.
Bootstrap support for A3LVF4 as seed ortholog is 100%.

Group of orthologs #1351. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:127 S.stipitis:127

B9RR52              	100.00%		A3LNU6              	100.00%
Bootstrap support for B9RR52 as seed ortholog is 100%.
Bootstrap support for A3LNU6 as seed ortholog is 100%.

Group of orthologs #1352. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:127

B9S6H3              	100.00%		A3LQD8              	100.00%
Bootstrap support for B9S6H3 as seed ortholog is 99%.
Bootstrap support for A3LQD8 as seed ortholog is 100%.

Group of orthologs #1353. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:127 S.stipitis:127

B9SJI3              	100.00%		A3GG01              	100.00%
Bootstrap support for B9SJI3 as seed ortholog is 100%.
Bootstrap support for A3GG01 as seed ortholog is 100%.

Group of orthologs #1354. Best score 127 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:127

B9SZS7              	100.00%		A3LST6              	100.00%
Bootstrap support for B9SZS7 as seed ortholog is 92%.
Bootstrap support for A3LST6 as seed ortholog is 100%.

Group of orthologs #1355. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:67 S.stipitis:126

B9RXV9              	100.00%		A3LSP8              	100.00%
B9R7X4              	23.30%		A3GGQ9              	66.73%
B9RDC8              	19.63%		
B9SK36              	18.90%		
B9S9Z8              	17.98%		
B9RDC7              	13.21%		
B9RCQ4              	11.74%		
Bootstrap support for B9RXV9 as seed ortholog is 96%.
Bootstrap support for A3LSP8 as seed ortholog is 100%.

Group of orthologs #1356. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:43

B9TAI6              	100.00%		A3LVE8              	100.00%
                    	       		A3LQR4              	8.29%
                    	       		A3LXR2              	5.15%
                    	       		A3LQT5              	5.04%
Bootstrap support for B9TAI6 as seed ortholog is 100%.
Bootstrap support for A3LVE8 as seed ortholog is 86%.

Group of orthologs #1357. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:126

B9RG16              	100.00%		A3GFX8              	100.00%
                    	       		A3LZ02              	79.55%
Bootstrap support for B9RG16 as seed ortholog is 100%.
Bootstrap support for A3GFX8 as seed ortholog is 100%.

Group of orthologs #1358. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:15

B9TBU4              	100.00%		A3GGI2              	100.00%
B9TB28              	11.25%		
Bootstrap support for B9TBU4 as seed ortholog is 97%.
Bootstrap support for A3GGI2 as seed ortholog is 67%.
Alternative seed ortholog is A3LW46 (15 bits away from this cluster)

Group of orthologs #1359. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:126

B9RN68              	100.00%		A3LTD6              	100.00%
Bootstrap support for B9RN68 as seed ortholog is 100%.
Bootstrap support for A3LTD6 as seed ortholog is 100%.

Group of orthologs #1360. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:126

B9RV90              	100.00%		A3LQS6              	100.00%
Bootstrap support for B9RV90 as seed ortholog is 100%.
Bootstrap support for A3LQS6 as seed ortholog is 100%.

Group of orthologs #1361. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:69

B9RX35              	100.00%		A3LSR5              	100.00%
Bootstrap support for B9RX35 as seed ortholog is 100%.
Bootstrap support for A3LSR5 as seed ortholog is 95%.

Group of orthologs #1362. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:126

B9ST27              	100.00%		A3GFC2              	100.00%
Bootstrap support for B9ST27 as seed ortholog is 92%.
Bootstrap support for A3GFC2 as seed ortholog is 100%.

Group of orthologs #1363. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:126 S.stipitis:60

B9STJ0              	100.00%		A3GFF1              	100.00%
Bootstrap support for B9STJ0 as seed ortholog is 100%.
Bootstrap support for A3GFF1 as seed ortholog is 99%.

Group of orthologs #1364. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:13 S.stipitis:37

B9SWY9              	100.00%		A3LVQ5              	100.00%
Bootstrap support for B9SWY9 as seed ortholog is 74%.
Alternative seed ortholog is B9RQP1 (13 bits away from this cluster)
Bootstrap support for A3LVQ5 as seed ortholog is 89%.

Group of orthologs #1365. Best score 126 bits
Score difference with first non-orthologous sequence - R.communis:17 S.stipitis:126

B9T3W4              	100.00%		A3LR28              	100.00%
Bootstrap support for B9T3W4 as seed ortholog is 62%.
Alternative seed ortholog is B9SFG2 (17 bits away from this cluster)
Bootstrap support for A3LR28 as seed ortholog is 100%.

Group of orthologs #1366. Best score 125 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:125

B9SXP9              	100.00%		A3LYS2              	100.00%
B9RP17              	69.89%		A3LX66              	16.76%
B9RDG1              	15.51%		
B9T8I4              	13.49%		
B9S0K4              	11.08%		
B9R8B6              	10.98%		
B9SXV3              	7.15%		
Bootstrap support for B9SXP9 as seed ortholog is 80%.
Bootstrap support for A3LYS2 as seed ortholog is 100%.

Group of orthologs #1367. Best score 125 bits
Score difference with first non-orthologous sequence - R.communis:125 S.stipitis:125

B9SSU4              	100.00%		A3GHH7              	100.00%
B9SGY2              	18.89%		A3LSH5              	23.46%
B9T6Y4              	8.89%		
Bootstrap support for B9SSU4 as seed ortholog is 100%.
Bootstrap support for A3GHH7 as seed ortholog is 100%.

Group of orthologs #1368. Best score 125 bits
Score difference with first non-orthologous sequence - R.communis:125 S.stipitis:125

B9SHK6              	100.00%		A3LP27              	100.00%
B9SKL3              	44.83%		
B9SXE9              	33.72%		
Bootstrap support for B9SHK6 as seed ortholog is 100%.
Bootstrap support for A3LP27 as seed ortholog is 100%.

Group of orthologs #1369. Best score 125 bits
Score difference with first non-orthologous sequence - R.communis:125 S.stipitis:125

B9RYQ6              	100.00%		A3GH29              	100.00%
B9SBP4              	84.54%		
Bootstrap support for B9RYQ6 as seed ortholog is 100%.
Bootstrap support for A3GH29 as seed ortholog is 100%.

Group of orthologs #1370. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:124

B9R6U8              	100.00%		A3LTB1              	100.00%
B9S4A2              	100.00%		A3LN92              	100.00%
B9S4A3              	60.67%		
B9T738              	57.25%		
B9RLF1              	52.20%		
B9SWV0              	31.87%		
Bootstrap support for B9R6U8 as seed ortholog is 82%.
Bootstrap support for B9S4A2 as seed ortholog is 84%.
Bootstrap support for A3LTB1 as seed ortholog is 100%.
Bootstrap support for A3LN92 as seed ortholog is 100%.

Group of orthologs #1371. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:124

B9SMJ6              	100.00%		A3GHL6              	100.00%
B9SMX4              	29.44%		A3LTR5              	33.05%
                    	       		A3LS46              	29.37%
Bootstrap support for B9SMJ6 as seed ortholog is 100%.
Bootstrap support for A3GHL6 as seed ortholog is 100%.

Group of orthologs #1372. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:124

B9S1A2              	100.00%		A3GIA6              	100.00%
B9SQU9              	28.84%		
Bootstrap support for B9S1A2 as seed ortholog is 100%.
Bootstrap support for A3GIA6 as seed ortholog is 100%.

Group of orthologs #1373. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:124

B9SAT1              	100.00%		A3LPV2              	100.00%
B9RVH3              	34.97%		
Bootstrap support for B9SAT1 as seed ortholog is 100%.
Bootstrap support for A3LPV2 as seed ortholog is 100%.

Group of orthologs #1374. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:82

B9SNF9              	100.00%		A3LW18              	100.00%
B9SAR8              	31.03%		
Bootstrap support for B9SNF9 as seed ortholog is 100%.
Bootstrap support for A3LW18 as seed ortholog is 100%.

Group of orthologs #1375. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:79

B9SRU5              	100.00%		A3LVV3              	100.00%
B9SSZ5              	23.23%		
Bootstrap support for B9SRU5 as seed ortholog is 100%.
Bootstrap support for A3LVV3 as seed ortholog is 98%.

Group of orthologs #1376. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:124

B9RCZ7              	100.00%		A3GH49              	100.00%
Bootstrap support for B9RCZ7 as seed ortholog is 100%.
Bootstrap support for A3GH49 as seed ortholog is 100%.

Group of orthologs #1377. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:124

B9REF6              	100.00%		A3LQS5              	100.00%
Bootstrap support for B9REF6 as seed ortholog is 100%.
Bootstrap support for A3LQS5 as seed ortholog is 100%.

Group of orthologs #1378. Best score 124 bits
Score difference with first non-orthologous sequence - R.communis:124 S.stipitis:124

B9SQ90              	100.00%		A3M062              	100.00%
Bootstrap support for B9SQ90 as seed ortholog is 100%.
Bootstrap support for A3M062 as seed ortholog is 100%.

Group of orthologs #1379. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:123 S.stipitis:70

B9SF51              	100.00%		A3LZF5              	100.00%
B9SZV9              	60.00%		
B9T4D2              	45.71%		
B9SR38              	38.86%		
B9RC95              	35.43%		
B9RDP8              	33.71%		
Bootstrap support for B9SF51 as seed ortholog is 100%.
Bootstrap support for A3LZF5 as seed ortholog is 99%.

Group of orthologs #1380. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:123 S.stipitis:123

B9S6V8              	100.00%		A3GHP3              	100.00%
B9R8Q3              	33.33%		
Bootstrap support for B9S6V8 as seed ortholog is 100%.
Bootstrap support for A3GHP3 as seed ortholog is 100%.

Group of orthologs #1381. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:123 S.stipitis:123

B9SV55              	100.00%		A3GGU2              	100.00%
B9SE07              	21.08%		
Bootstrap support for B9SV55 as seed ortholog is 100%.
Bootstrap support for A3GGU2 as seed ortholog is 100%.

Group of orthologs #1382. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:123

B9T5C1              	100.00%		A3LQS4              	100.00%
B9SK31              	17.55%		
Bootstrap support for B9T5C1 as seed ortholog is 97%.
Bootstrap support for A3LQS4 as seed ortholog is 100%.

Group of orthologs #1383. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:123 S.stipitis:123

B9RBX1              	100.00%		A3LWZ5              	100.00%
Bootstrap support for B9RBX1 as seed ortholog is 100%.
Bootstrap support for A3LWZ5 as seed ortholog is 100%.

Group of orthologs #1384. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:123 S.stipitis:123

B9RLA7              	100.00%		A3M0L5              	100.00%
Bootstrap support for B9RLA7 as seed ortholog is 100%.
Bootstrap support for A3M0L5 as seed ortholog is 100%.

Group of orthologs #1385. Best score 123 bits
Score difference with first non-orthologous sequence - R.communis:123 S.stipitis:123

B9T2T7              	100.00%		A3LR91              	100.00%
Bootstrap support for B9T2T7 as seed ortholog is 100%.
Bootstrap support for A3LR91 as seed ortholog is 100%.

Group of orthologs #1386. Best score 122 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:122

B9R974              	100.00%		A3GFC3              	100.00%
B9S2A0              	85.93%		
Bootstrap support for B9R974 as seed ortholog is 100%.
Bootstrap support for A3GFC3 as seed ortholog is 100%.

Group of orthologs #1387. Best score 122 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:122

B9RQ77              	100.00%		A3GFI1              	100.00%
                    	       		A3M0D5              	14.34%
Bootstrap support for B9RQ77 as seed ortholog is 100%.
Bootstrap support for A3GFI1 as seed ortholog is 100%.

Group of orthologs #1388. Best score 122 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:122

B9RBZ9              	100.00%		A3LTQ6              	100.00%
Bootstrap support for B9RBZ9 as seed ortholog is 100%.
Bootstrap support for A3LTQ6 as seed ortholog is 100%.

Group of orthologs #1389. Best score 122 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:122

B9S3T7              	100.00%		A3GG11              	100.00%
Bootstrap support for B9S3T7 as seed ortholog is 100%.
Bootstrap support for A3GG11 as seed ortholog is 100%.

Group of orthologs #1390. Best score 122 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:122

B9S7A4              	100.00%		A3LWU2              	100.00%
Bootstrap support for B9S7A4 as seed ortholog is 100%.
Bootstrap support for A3LWU2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 122 bits
Score difference with first non-orthologous sequence - R.communis:122 S.stipitis:122

B9SPA7              	100.00%		A3GEW2              	100.00%
Bootstrap support for B9SPA7 as seed ortholog is 100%.
Bootstrap support for A3GEW2 as seed ortholog is 100%.

Group of orthologs #1392. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:34

B9RCD3              	100.00%		A3GFG2              	100.00%
B9RCD2              	58.16%		A3LUB3              	35.91%
B9RIW1              	52.65%		
B9RIW0              	48.37%		
B9SZC4              	43.88%		
B9RAX7              	32.86%		
B9RYQ7              	26.33%		
Bootstrap support for B9RCD3 as seed ortholog is 87%.
Bootstrap support for A3GFG2 as seed ortholog is 81%.

Group of orthologs #1393. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:25 S.stipitis:121

B9S826              	100.00%		A3LV73              	100.00%
B9S827              	82.24%		A3LV64              	17.83%
B9RGM7              	25.19%		
B9S4T3              	24.81%		
B9RTF2              	24.31%		
B9SXF0              	20.03%		
B9RED4              	16.88%		
Bootstrap support for B9S826 as seed ortholog is 82%.
Bootstrap support for A3LV73 as seed ortholog is 100%.

Group of orthologs #1394. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:49

B9RF53              	100.00%		A3LQK5              	100.00%
B9RTX9              	66.87%		
Bootstrap support for B9RF53 as seed ortholog is 82%.
Bootstrap support for A3LQK5 as seed ortholog is 89%.

Group of orthologs #1395. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9RFM0              	100.00%		A3LRT4              	100.00%
B9RN95              	79.45%		
Bootstrap support for B9RFM0 as seed ortholog is 100%.
Bootstrap support for A3LRT4 as seed ortholog is 100%.

Group of orthologs #1396. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9RCZ4              	100.00%		A3LWU8              	100.00%
                    	       		A3LUW6              	10.15%
Bootstrap support for B9RCZ4 as seed ortholog is 100%.
Bootstrap support for A3LWU8 as seed ortholog is 100%.

Group of orthologs #1397. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:81

B9RCF8              	100.00%		A3LZL1              	100.00%
B9RF09              	33.07%		
Bootstrap support for B9RCF8 as seed ortholog is 100%.
Bootstrap support for A3LZL1 as seed ortholog is 99%.

Group of orthologs #1398. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9S6H9              	100.00%		A3LZI5              	100.00%
B9SMT6              	75.44%		
Bootstrap support for B9S6H9 as seed ortholog is 100%.
Bootstrap support for A3LZI5 as seed ortholog is 100%.

Group of orthologs #1399. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9RCM6              	100.00%		A3LV74              	100.00%
Bootstrap support for B9RCM6 as seed ortholog is 100%.
Bootstrap support for A3LV74 as seed ortholog is 100%.

Group of orthologs #1400. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9RN72              	100.00%		A3LXS6              	100.00%
Bootstrap support for B9RN72 as seed ortholog is 100%.
Bootstrap support for A3LXS6 as seed ortholog is 100%.

Group of orthologs #1401. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9SRX8              	100.00%		A3LRR2              	100.00%
Bootstrap support for B9SRX8 as seed ortholog is 100%.
Bootstrap support for A3LRR2 as seed ortholog is 100%.

Group of orthologs #1402. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:121 S.stipitis:121

B9SX88              	100.00%		A3LT86              	100.00%
Bootstrap support for B9SX88 as seed ortholog is 100%.
Bootstrap support for A3LT86 as seed ortholog is 100%.

Group of orthologs #1403. Best score 121 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:121

B9SYX8              	100.00%		A3M0H3              	100.00%
Bootstrap support for B9SYX8 as seed ortholog is 99%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #1404. Best score 120 bits
Score difference with first non-orthologous sequence - R.communis:120 S.stipitis:120

B9SPF5              	100.00%		A3LT51              	100.00%
B9SWN8              	88.50%		
Bootstrap support for B9SPF5 as seed ortholog is 100%.
Bootstrap support for A3LT51 as seed ortholog is 100%.

Group of orthologs #1405. Best score 119 bits
Score difference with first non-orthologous sequence - R.communis:119 S.stipitis:119

B9R8R9              	100.00%		A3LNY4              	100.00%
B9T7C8              	32.93%		
Bootstrap support for B9R8R9 as seed ortholog is 100%.
Bootstrap support for A3LNY4 as seed ortholog is 100%.

Group of orthologs #1406. Best score 119 bits
Score difference with first non-orthologous sequence - R.communis:38 S.stipitis:119

B9R9Z9              	100.00%		A3LMS3              	100.00%
Bootstrap support for B9R9Z9 as seed ortholog is 91%.
Bootstrap support for A3LMS3 as seed ortholog is 100%.

Group of orthologs #1407. Best score 119 bits
Score difference with first non-orthologous sequence - R.communis:119 S.stipitis:119

B9SG06              	100.00%		A3LQF3              	100.00%
Bootstrap support for B9SG06 as seed ortholog is 100%.
Bootstrap support for A3LQF3 as seed ortholog is 100%.

Group of orthologs #1408. Best score 119 bits
Score difference with first non-orthologous sequence - R.communis:119 S.stipitis:119

B9SRV9              	100.00%		A3LNS5              	100.00%
Bootstrap support for B9SRV9 as seed ortholog is 100%.
Bootstrap support for A3LNS5 as seed ortholog is 100%.

Group of orthologs #1409. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9S6B6              	100.00%		A3LY03              	100.00%
B9S6B2              	37.63%		
B9RH77              	34.56%		
B9RMH6              	34.32%		
B9S6B1              	32.90%		
B9S6B7              	31.83%		
B9S6A0              	31.72%		
B9S6B5              	31.60%		
B9R7Y3              	30.18%		
B9SXM0              	25.33%		
B9RV66              	24.14%		
B9R919              	22.72%		
B9RUJ6              	22.25%		
B9SE29              	20.83%		
B9T8B4              	20.12%		
B9RUJ7              	17.87%		
B9REM7              	17.63%		
B9RMH8              	17.63%		
B9RPK7              	11.95%		
B9T510              	11.60%		
Bootstrap support for B9S6B6 as seed ortholog is 100%.
Bootstrap support for A3LY03 as seed ortholog is 100%.

Group of orthologs #1410. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:17 S.stipitis:118

B9RDT3              	100.00%		A3LQY2              	100.00%
B9RCD1              	86.08%		
B9SZD0              	82.44%		
Q70AP4              	82.23%		
B9SLJ7              	81.80%		
Q70AP3              	61.03%		
B9T3D7              	60.17%		
B9SWB1              	59.74%		
B9S0M0              	59.10%		
B9SYS1              	28.48%		
Bootstrap support for B9RDT3 as seed ortholog is 70%.
Alternative seed ortholog is B9SCK5 (17 bits away from this cluster)
Bootstrap support for A3LQY2 as seed ortholog is 100%.

Group of orthologs #1411. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9S5R7              	100.00%		A3M0B4              	100.00%
B9SRU6              	100.00%		A3LQ65              	15.44%
Bootstrap support for B9S5R7 as seed ortholog is 100%.
Bootstrap support for B9SRU6 as seed ortholog is 100%.
Bootstrap support for A3M0B4 as seed ortholog is 100%.

Group of orthologs #1412. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9RIS9              	100.00%		A3LTX2              	100.00%
B9RCG9              	73.99%		
Bootstrap support for B9RIS9 as seed ortholog is 100%.
Bootstrap support for A3LTX2 as seed ortholog is 100%.

Group of orthologs #1413. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9S6H7              	100.00%		A3LPF1              	100.00%
B9SBL1              	30.92%		
Bootstrap support for B9S6H7 as seed ortholog is 100%.
Bootstrap support for A3LPF1 as seed ortholog is 100%.

Group of orthologs #1414. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9SLP0              	100.00%		A3LZC5              	100.00%
B9S3V4              	18.58%		
Bootstrap support for B9SLP0 as seed ortholog is 100%.
Bootstrap support for A3LZC5 as seed ortholog is 100%.

Group of orthologs #1415. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9RBM1              	100.00%		A3LW62              	100.00%
Bootstrap support for B9RBM1 as seed ortholog is 100%.
Bootstrap support for A3LW62 as seed ortholog is 100%.

Group of orthologs #1416. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9RZT0              	100.00%		A3LZT7              	100.00%
Bootstrap support for B9RZT0 as seed ortholog is 100%.
Bootstrap support for A3LZT7 as seed ortholog is 100%.

Group of orthologs #1417. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9S6U7              	100.00%		A3LZI6              	100.00%
Bootstrap support for B9S6U7 as seed ortholog is 100%.
Bootstrap support for A3LZI6 as seed ortholog is 100%.

Group of orthologs #1418. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9SKR5              	100.00%		A3LW97              	100.00%
Bootstrap support for B9SKR5 as seed ortholog is 100%.
Bootstrap support for A3LW97 as seed ortholog is 100%.

Group of orthologs #1419. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9SV58              	100.00%		A3LPA0              	100.00%
Bootstrap support for B9SV58 as seed ortholog is 100%.
Bootstrap support for A3LPA0 as seed ortholog is 100%.

Group of orthologs #1420. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9SXX3              	100.00%		A3LNF2              	100.00%
Bootstrap support for B9SXX3 as seed ortholog is 100%.
Bootstrap support for A3LNF2 as seed ortholog is 100%.

Group of orthologs #1421. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:20

B9T7Z1              	100.00%		A3GHV4              	100.00%
Bootstrap support for B9T7Z1 as seed ortholog is 99%.
Bootstrap support for A3GHV4 as seed ortholog is 85%.

Group of orthologs #1422. Best score 118 bits
Score difference with first non-orthologous sequence - R.communis:118 S.stipitis:118

B9T2V8              	100.00%		A3M0D0              	100.00%
Bootstrap support for B9T2V8 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #1423. Best score 117 bits
Score difference with first non-orthologous sequence - R.communis:117 S.stipitis:62

B9SGX2              	100.00%		A3LPB5              	100.00%
B9T0K0              	57.61%		
B9RWV9              	53.08%		
B9RJH4              	49.06%		
Bootstrap support for B9SGX2 as seed ortholog is 100%.
Bootstrap support for A3LPB5 as seed ortholog is 91%.

Group of orthologs #1424. Best score 117 bits
Score difference with first non-orthologous sequence - R.communis:38 S.stipitis:35

B9T5Q8              	100.00%		A3LPI1              	100.00%
B9SSM5              	11.94%		A3LZX3              	78.74%
                    	       		A3GHL5              	14.74%
Bootstrap support for B9T5Q8 as seed ortholog is 88%.
Bootstrap support for A3LPI1 as seed ortholog is 87%.

Group of orthologs #1425. Best score 117 bits
Score difference with first non-orthologous sequence - R.communis:117 S.stipitis:117

B9S5M4              	100.00%		A3GHD3              	100.00%
B9SHV0              	11.85%		
Bootstrap support for B9S5M4 as seed ortholog is 100%.
Bootstrap support for A3GHD3 as seed ortholog is 100%.

Group of orthologs #1426. Best score 117 bits
Score difference with first non-orthologous sequence - R.communis:117 S.stipitis:117

B9S648              	100.00%		A3LWK7              	100.00%
Bootstrap support for B9S648 as seed ortholog is 100%.
Bootstrap support for A3LWK7 as seed ortholog is 100%.

Group of orthologs #1427. Best score 117 bits
Score difference with first non-orthologous sequence - R.communis:29 S.stipitis:117

B9T4U5              	100.00%		A3LVX7              	100.00%
Bootstrap support for B9T4U5 as seed ortholog is 82%.
Bootstrap support for A3LVX7 as seed ortholog is 100%.

Group of orthologs #1428. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9S7V4              	100.00%		A3LWR6              	100.00%
B9T2E4              	100.00%		A3LWS7              	100.00%
B9S7U9              	57.14%		
B9S7V0              	50.00%		
B9S7V5              	36.97%		
B9S7U8              	32.35%		
B9T2E3              	30.46%		
B9S7U6              	27.73%		
B9SEX1              	24.50%		
B9SGU8              	18.54%		
B9S8S2              	9.60%		
B9S7U5              	5.88%		
Bootstrap support for B9S7V4 as seed ortholog is 100%.
Bootstrap support for B9T2E4 as seed ortholog is 100%.
Bootstrap support for A3LWR6 as seed ortholog is 100%.
Bootstrap support for A3LWS7 as seed ortholog is 100%.

Group of orthologs #1429. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9T128              	100.00%		A3LSX0              	100.00%
B9SP68              	41.84%		
B9T5B4              	40.51%		
B9SP87              	40.31%		
B9RP36              	17.76%		
B9SCP6              	14.39%		
Bootstrap support for B9T128 as seed ortholog is 100%.
Bootstrap support for A3LSX0 as seed ortholog is 100%.

Group of orthologs #1430. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9RE82              	100.00%		A3LPX2              	100.00%
B9TAI2              	56.09%		
B9RYI1              	26.69%		
Bootstrap support for B9RE82 as seed ortholog is 100%.
Bootstrap support for A3LPX2 as seed ortholog is 100%.

Group of orthologs #1431. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:64

B9RSM6              	100.00%		A3LSA8              	100.00%
B9SAB0              	11.53%		
B9R8I6              	7.03%		
Bootstrap support for B9RSM6 as seed ortholog is 83%.
Bootstrap support for A3LSA8 as seed ortholog is 93%.

Group of orthologs #1432. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9SJ40              	100.00%		A3LWW1              	100.00%
B9SJ41              	88.33%		
B9TIP5              	6.44%		
Bootstrap support for B9SJ40 as seed ortholog is 100%.
Bootstrap support for A3LWW1 as seed ortholog is 100%.

Group of orthologs #1433. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9RG64              	100.00%		A3LSB8              	100.00%
B9SXM8              	62.61%		
Bootstrap support for B9RG64 as seed ortholog is 100%.
Bootstrap support for A3LSB8 as seed ortholog is 100%.

Group of orthologs #1434. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9S068              	100.00%		A3GGM2              	100.00%
B9SUD1              	76.41%		
Bootstrap support for B9S068 as seed ortholog is 100%.
Bootstrap support for A3GGM2 as seed ortholog is 100%.

Group of orthologs #1435. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9SG89              	100.00%		A3LSR9              	100.00%
B9SGJ1              	21.65%		
Bootstrap support for B9SG89 as seed ortholog is 100%.
Bootstrap support for A3LSR9 as seed ortholog is 100%.

Group of orthologs #1436. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9T7B9              	100.00%		A3LPC0              	100.00%
B9STT2              	44.74%		
Bootstrap support for B9T7B9 as seed ortholog is 100%.
Bootstrap support for A3LPC0 as seed ortholog is 100%.

Group of orthologs #1437. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9RMZ3              	100.00%		A3LYG5              	100.00%
Bootstrap support for B9RMZ3 as seed ortholog is 100%.
Bootstrap support for A3LYG5 as seed ortholog is 100%.

Group of orthologs #1438. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9S300              	100.00%		A3LW07              	100.00%
Bootstrap support for B9S300 as seed ortholog is 100%.
Bootstrap support for A3LW07 as seed ortholog is 100%.

Group of orthologs #1439. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:28 S.stipitis:116

B9SHZ3              	100.00%		A3LWX1              	100.00%
Bootstrap support for B9SHZ3 as seed ortholog is 78%.
Bootstrap support for A3LWX1 as seed ortholog is 100%.

Group of orthologs #1440. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

B9STA0              	100.00%		A3LR25              	100.00%
Bootstrap support for B9STA0 as seed ortholog is 100%.
Bootstrap support for A3LR25 as seed ortholog is 100%.

Group of orthologs #1441. Best score 116 bits
Score difference with first non-orthologous sequence - R.communis:116 S.stipitis:116

G1D737              	100.00%		A3GFR4              	100.00%
Bootstrap support for G1D737 as seed ortholog is 100%.
Bootstrap support for A3GFR4 as seed ortholog is 100%.

Group of orthologs #1442. Best score 115 bits
Score difference with first non-orthologous sequence - R.communis:115 S.stipitis:115

B9SED6              	100.00%		A3GHF6              	100.00%
B9SHS3              	100.00%		A3LWI2              	100.00%
B9SEQ1              	9.70%		
Bootstrap support for B9SED6 as seed ortholog is 100%.
Bootstrap support for B9SHS3 as seed ortholog is 100%.
Bootstrap support for A3GHF6 as seed ortholog is 100%.
Bootstrap support for A3LWI2 as seed ortholog is 100%.

Group of orthologs #1443. Best score 115 bits
Score difference with first non-orthologous sequence - R.communis:115 S.stipitis:115

B9SFH3              	100.00%		A3LQC9              	100.00%
B9RTM3              	69.91%		
B9T060              	44.52%		
Bootstrap support for B9SFH3 as seed ortholog is 100%.
Bootstrap support for A3LQC9 as seed ortholog is 100%.

Group of orthologs #1444. Best score 115 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:115

B9SC06              	100.00%		A3LWH8              	100.00%
Bootstrap support for B9SC06 as seed ortholog is 87%.
Bootstrap support for A3LWH8 as seed ortholog is 100%.

Group of orthologs #1445. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9RNX9              	100.00%		A3LTF6              	100.00%
B9SC02              	22.71%		
B9SBZ8              	17.29%		
B9SBZ9              	16.67%		
Bootstrap support for B9RNX9 as seed ortholog is 100%.
Bootstrap support for A3LTF6 as seed ortholog is 100%.

Group of orthologs #1446. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9SFF7              	100.00%		A3LXU5              	100.00%
B9SFF9              	48.10%		
B9SFF8              	32.88%		
B9RSU0              	20.11%		
Bootstrap support for B9SFF7 as seed ortholog is 100%.
Bootstrap support for A3LXU5 as seed ortholog is 100%.

Group of orthologs #1447. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9RAH2              	100.00%		A3LYC6              	100.00%
B9S7A2              	56.15%		
Bootstrap support for B9RAH2 as seed ortholog is 100%.
Bootstrap support for A3LYC6 as seed ortholog is 100%.

Group of orthologs #1448. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9S1N8              	100.00%		A3LTG9              	100.00%
Bootstrap support for B9S1N8 as seed ortholog is 100%.
Bootstrap support for A3LTG9 as seed ortholog is 100%.

Group of orthologs #1449. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9S4A4              	100.00%		A3LT47              	100.00%
Bootstrap support for B9S4A4 as seed ortholog is 100%.
Bootstrap support for A3LT47 as seed ortholog is 100%.

Group of orthologs #1450. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9S3Q1              	100.00%		A3LY75              	100.00%
Bootstrap support for B9S3Q1 as seed ortholog is 100%.
Bootstrap support for A3LY75 as seed ortholog is 100%.

Group of orthologs #1451. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9S6F0              	100.00%		A3LWW0              	100.00%
Bootstrap support for B9S6F0 as seed ortholog is 100%.
Bootstrap support for A3LWW0 as seed ortholog is 100%.

Group of orthologs #1452. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9SFH4              	100.00%		A3LNT2              	100.00%
Bootstrap support for B9SFH4 as seed ortholog is 100%.
Bootstrap support for A3LNT2 as seed ortholog is 100%.

Group of orthologs #1453. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9SYU5              	100.00%		A3GFI0              	100.00%
Bootstrap support for B9SYU5 as seed ortholog is 100%.
Bootstrap support for A3GFI0 as seed ortholog is 100%.

Group of orthologs #1454. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:53

B9SWV9              	100.00%		A3LUS9              	100.00%
Bootstrap support for B9SWV9 as seed ortholog is 100%.
Bootstrap support for A3LUS9 as seed ortholog is 89%.

Group of orthologs #1455. Best score 114 bits
Score difference with first non-orthologous sequence - R.communis:114 S.stipitis:114

B9TDE3              	100.00%		A3LTC2              	100.00%
Bootstrap support for B9TDE3 as seed ortholog is 100%.
Bootstrap support for A3LTC2 as seed ortholog is 100%.

Group of orthologs #1456. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9RIX0              	100.00%		A3LRS0              	100.00%
B9RDR3              	72.92%		
Bootstrap support for B9RIX0 as seed ortholog is 100%.
Bootstrap support for A3LRS0 as seed ortholog is 100%.

Group of orthologs #1457. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9S424              	100.00%		A3GH99              	100.00%
B9RTY6              	65.54%		
Bootstrap support for B9S424 as seed ortholog is 100%.
Bootstrap support for A3GH99 as seed ortholog is 100%.

Group of orthologs #1458. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9R879              	100.00%		A3M090              	100.00%
Bootstrap support for B9R879 as seed ortholog is 100%.
Bootstrap support for A3M090 as seed ortholog is 100%.

Group of orthologs #1459. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9REY7              	100.00%		A3LXR6              	100.00%
Bootstrap support for B9REY7 as seed ortholog is 100%.
Bootstrap support for A3LXR6 as seed ortholog is 100%.

Group of orthologs #1460. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9RWI6              	100.00%		A3LZP8              	100.00%
Bootstrap support for B9RWI6 as seed ortholog is 100%.
Bootstrap support for A3LZP8 as seed ortholog is 100%.

Group of orthologs #1461. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9S7I9              	100.00%		A3LR67              	100.00%
Bootstrap support for B9S7I9 as seed ortholog is 100%.
Bootstrap support for A3LR67 as seed ortholog is 100%.

Group of orthologs #1462. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9SYF4              	100.00%		A3GH04              	100.00%
Bootstrap support for B9SYF4 as seed ortholog is 100%.
Bootstrap support for A3GH04 as seed ortholog is 100%.

Group of orthologs #1463. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9SRC1              	100.00%		A3LU58              	100.00%
Bootstrap support for B9SRC1 as seed ortholog is 100%.
Bootstrap support for A3LU58 as seed ortholog is 100%.

Group of orthologs #1464. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:113

B9T810              	100.00%		A3GF77              	100.00%
Bootstrap support for B9T810 as seed ortholog is 88%.
Bootstrap support for A3GF77 as seed ortholog is 100%.

Group of orthologs #1465. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

B9TKP7              	100.00%		A3LYE5              	100.00%
Bootstrap support for B9TKP7 as seed ortholog is 100%.
Bootstrap support for A3LYE5 as seed ortholog is 100%.

Group of orthologs #1466. Best score 113 bits
Score difference with first non-orthologous sequence - R.communis:113 S.stipitis:113

Q67C39              	100.00%		A3LYB5              	100.00%
Bootstrap support for Q67C39 as seed ortholog is 100%.
Bootstrap support for A3LYB5 as seed ortholog is 100%.

Group of orthologs #1467. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:30 S.stipitis:56

B9S0K6              	100.00%		A3GFB3              	100.00%
B9RAR1              	23.04%		
B9SQT1              	15.21%		
Bootstrap support for B9S0K6 as seed ortholog is 95%.
Bootstrap support for A3GFB3 as seed ortholog is 96%.

Group of orthologs #1468. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:112

B9SEQ7              	100.00%		A3LYT8              	100.00%
B9RT65              	28.46%		
Bootstrap support for B9SEQ7 as seed ortholog is 100%.
Bootstrap support for A3LYT8 as seed ortholog is 100%.

Group of orthologs #1469. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:66

B9RAZ9              	100.00%		A3LVW6              	100.00%
Bootstrap support for B9RAZ9 as seed ortholog is 100%.
Bootstrap support for A3LVW6 as seed ortholog is 91%.

Group of orthologs #1470. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:112

B9RK42              	100.00%		A3LRX9              	100.00%
Bootstrap support for B9RK42 as seed ortholog is 100%.
Bootstrap support for A3LRX9 as seed ortholog is 100%.

Group of orthologs #1471. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:112

B9RXD5              	100.00%		A3LVD2              	100.00%
Bootstrap support for B9RXD5 as seed ortholog is 71%.
Alternative seed ortholog is B9RV07 (18 bits away from this cluster)
Bootstrap support for A3LVD2 as seed ortholog is 100%.

Group of orthologs #1472. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:112

B9S964              	100.00%		A3LS19              	100.00%
Bootstrap support for B9S964 as seed ortholog is 100%.
Bootstrap support for A3LS19 as seed ortholog is 100%.

Group of orthologs #1473. Best score 112 bits
Score difference with first non-orthologous sequence - R.communis:112 S.stipitis:112

B9T028              	100.00%		A3LS99              	100.00%
Bootstrap support for B9T028 as seed ortholog is 100%.
Bootstrap support for A3LS99 as seed ortholog is 100%.

Group of orthologs #1474. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:46

B9RFT5              	100.00%		A3LUB0              	100.00%
B9S537              	37.04%		
B9RM95              	35.29%		
B9RT11              	34.98%		
B9SGD4              	32.61%		
B9SAG9              	32.00%		
B9SGT2              	31.28%		
B9R8N9              	28.81%		
B9RXN9              	28.70%		
B9T0R6              	27.37%		
B9RH33              	24.49%		
B9S2B9              	20.88%		
B9RUM3              	19.96%		
B9S298              	19.75%		
B9S1V9              	19.44%		
B9SME9              	19.14%		
B9S1N3              	18.11%		
B9RRA2              	17.90%		
B9T7T7              	17.90%		
B9SBN3              	17.80%		
B9T4H9              	17.49%		
B9RQY5              	17.39%		
B9S327              	17.39%		
B9S5P9              	17.28%		
B9S0J3              	17.08%		
B9S6U5              	16.87%		
B9SAC0              	16.77%		
B9SMD4              	16.46%		
B9R8N8              	15.95%		
B9SY66              	15.84%		
B9SZM0              	15.74%		
B9SZM1              	14.71%		
B9T043              	14.51%		
B9T504              	14.09%		
B9SX32              	14.09%		
B9SKG0              	13.79%		
B9SZI2              	13.79%		
B9RBE2              	13.68%		
B9RMB0              	13.17%		
B9R975              	13.17%		
B9RNY7              	13.07%		
B9RN61              	12.96%		
B9RQM3              	12.96%		
B9SKY3              	12.76%		
B9RZ65              	12.45%		
B9SMV6              	12.45%		
B9T048              	12.45%		
B9RV84              	12.45%		
B9S716              	12.24%		
B9T7X4              	12.24%		
B9T805              	12.14%		
B9RBE8              	12.14%		
B9RDW7              	12.04%		
B9T046              	11.83%		
B9SNX7              	11.63%		
B9RQM8              	11.52%		
B9RQM9              	11.52%		
B9SP66              	11.42%		
B9SU98              	11.32%		
B9RUR6              	11.32%		
B9SHE3              	11.21%		
B9T689              	11.21%		
B9RQM6              	11.11%		
B9SC89              	10.91%		
B9RDG2              	10.70%		
B9RXG1              	10.70%		
B9SBW7              	10.70%		
B9SVD1              	10.60%		
B9R799              	10.39%		
B9S2P2              	10.39%		
B9S0M3              	10.19%		
B9SV57              	10.19%		
B9RRF8              	10.19%		
B9SFK8              	9.88%		
B9RXS7              	9.88%		
B9RTW8              	9.67%		
B9S3R0              	9.67%		
B9S040              	9.47%		
B9RF26              	9.36%		
B9SE57              	9.36%		
B9SMM3              	9.36%		
B9R9K2              	9.16%		
B9SPJ3              	9.16%		
B9SBV8              	9.05%		
B9SI35              	9.05%		
B9S8B3              	9.05%		
B9S7S8              	8.95%		
B9SML3              	8.95%		
B9T632              	8.95%		
B9T925              	8.95%		
B9T5K1              	8.85%		
B9SQR5              	8.64%		
B9RN62              	8.54%		
B9SXJ7              	8.54%		
B9S9Z6              	8.44%		
B9S3F8              	8.44%		
B9SXQ3              	8.33%		
B9T2J8              	8.33%		
B9STF9              	8.23%		
B9S8E8              	8.23%		
B9RZY2              	8.13%		
B9SXJ9              	7.92%		
B9RX83              	7.82%		
B9S3F7              	7.72%		
B9SF98              	7.72%		
B9SIY3              	7.61%		
B9RM90              	7.51%		
B9RAZ7              	7.41%		
B9S3E3              	7.41%		
B9SR04              	7.10%		
B9SD70              	6.89%		
B9RDU9              	6.79%		
B9SPN3              	6.69%		
B9SHK5              	6.48%		
B9T5Y3              	6.48%		
B9SLZ8              	6.38%		
B9T4Q3              	6.28%		
B9SJY4              	6.28%		
B9RGW0              	6.17%		
B9REZ8              	6.17%		
B9S365              	6.17%		
B9SLZ9              	6.07%		
B9RIJ8              	5.86%		
B9RSP0              	5.76%		
B9RIJ2              	5.66%		
B9SEM4              	5.66%		
B9RIJ7              	5.56%		
B9R759              	5.56%		
B9SH77              	5.45%		
B9SB44              	5.45%		
B9SM01              	5.35%		
B9SMS2              	5.35%		
B9SRS3              	5.25%		
B9R9K6              	5.14%		
B9RJU1              	5.14%		
B9T5Y2              	5.14%		
B9RFQ2              	5.14%		
B9RB88              	5.04%		
Bootstrap support for B9RFT5 as seed ortholog is 100%.
Bootstrap support for A3LUB0 as seed ortholog is 55%.
Alternative seed ortholog is A3GHJ2 (46 bits away from this cluster)

Group of orthologs #1475. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9TJF2              	100.00%		A3GI53              	100.00%
B9S1I0              	9.45%		
B9SQ93              	5.51%		
Bootstrap support for B9TJF2 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #1476. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9S691              	100.00%		A3LYD7              	100.00%
B9RB19              	8.40%		
Bootstrap support for B9S691 as seed ortholog is 100%.
Bootstrap support for A3LYD7 as seed ortholog is 100%.

Group of orthologs #1477. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9SG87              	100.00%		A3LWB6              	100.00%
B9T820              	5.36%		
Bootstrap support for B9SG87 as seed ortholog is 100%.
Bootstrap support for A3LWB6 as seed ortholog is 100%.

Group of orthologs #1478. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:5 S.stipitis:111

B9RGS3              	100.00%		A3LWS1              	100.00%
Bootstrap support for B9RGS3 as seed ortholog is 60%.
Alternative seed ortholog is B9RV11 (5 bits away from this cluster)
Bootstrap support for A3LWS1 as seed ortholog is 100%.

Group of orthologs #1479. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9RKD5              	100.00%		A3LX45              	100.00%
Bootstrap support for B9RKD5 as seed ortholog is 100%.
Bootstrap support for A3LX45 as seed ortholog is 100%.

Group of orthologs #1480. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9RXR7              	100.00%		A3LUD2              	100.00%
Bootstrap support for B9RXR7 as seed ortholog is 100%.
Bootstrap support for A3LUD2 as seed ortholog is 100%.

Group of orthologs #1481. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9S1S6              	100.00%		A3LT37              	100.00%
Bootstrap support for B9S1S6 as seed ortholog is 100%.
Bootstrap support for A3LT37 as seed ortholog is 100%.

Group of orthologs #1482. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:53

B9SZ91              	100.00%		A3LN58              	100.00%
Bootstrap support for B9SZ91 as seed ortholog is 100%.
Bootstrap support for A3LN58 as seed ortholog is 96%.

Group of orthologs #1483. Best score 111 bits
Score difference with first non-orthologous sequence - R.communis:111 S.stipitis:111

B9STM3              	100.00%		A3LY47              	100.00%
Bootstrap support for B9STM3 as seed ortholog is 100%.
Bootstrap support for A3LY47 as seed ortholog is 100%.

Group of orthologs #1484. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:110

B9SRN5              	100.00%		A3LYQ1              	100.00%
B9SRN4              	91.73%		
B9SRN1              	79.38%		
B9SRN0              	65.31%		
B9SRM8              	60.90%		
B9SRM6              	47.48%		
B9SRM4              	36.31%		
B9SRM5              	35.45%		
B9RBW9              	31.47%		
B9RHX8              	26.42%		
B9T1C6              	25.46%		
B9R9F5              	24.81%		
B9RBQ8              	22.66%		
B9RHX9              	22.34%		
B9RC29              	22.23%		
B9RAS2              	21.91%		
B9RE29              	21.16%		
B9SB66              	21.16%		
B9SB72              	20.52%		
B9SB69              	20.30%		
B9RLJ1              	20.19%		
B9SVN7              	20.09%		
B9RQJ9              	19.98%		
B9S5P8              	19.98%		
B9RHI5              	19.76%		
B9RAR9              	19.55%		
B9RAR8              	19.55%		
B9SG22              	19.33%		
B9R855              	19.23%		
B9R857              	19.12%		
B9RRA1              	18.90%		
B9SVN9              	18.80%		
B9RCY8              	18.69%		
B9RHW8              	18.69%		
B9S9Q2              	18.69%		
B9SY53              	18.58%		
B9SBU8              	18.47%		
B9RHW6              	18.47%		
B9SB73              	18.26%		
B9RMP3              	18.26%		
B9T233              	18.26%		
B9T2D1              	18.15%		
B9RBQ9              	18.15%		
B9SBV3              	18.15%		
B9RLP6              	18.15%		
B9RAS3              	18.05%		
B9S9U3              	18.05%		
B9RHX3              	17.94%		
B9R747              	17.94%		
B9R7L5              	17.72%		
B9R9P5              	17.72%		
B9SJN4              	17.62%		
B9T235              	17.62%		
B9SBG5              	17.51%		
B9RHX0              	17.40%		
B9RHW4              	17.29%		
B9R746              	17.19%		
B9R7L8              	16.97%		
B9T234              	16.86%		
B9RM58              	16.65%		
B9SA84              	16.65%		
B9SYN4              	16.65%		
B9RHW2              	16.54%		
B9RAS4              	16.43%		
B9T2D3              	16.00%		
B9RBW8              	15.25%		
B9RM57              	15.04%		
B9SVN8              	14.93%		
B9R737              	14.82%		
B9T0U6              	14.82%		
B9R738              	14.72%		
B9R7L9              	14.72%		
B9RHX6              	14.72%		
B9SG23              	13.86%		
B9R7K5              	13.75%		
B9R7K4              	13.43%		
B9T2D0              	13.43%		
B9T2D2              	13.43%		
B9R7L2              	13.32%		
B9SYM5              	13.32%		
B9R7M0              	13.21%		
B9R743              	13.10%		
B9SYM4              	12.78%		
B9S8Q1              	12.67%		
B9R7L3              	12.57%		
B9SJN3              	12.46%		
B9R7K8              	12.24%		
B9RYU2              	11.82%		
B9SMA4              	11.60%		
B9R991              	10.85%		
B9RMF1              	10.53%		
B9T4M2              	10.53%		
B9T515              	10.20%		
B9SD83              	10.10%		
B9T1Z9              	9.77%		
B9SG18              	9.34%		
B9T9S7              	9.24%		
B9SY12              	8.49%		
B9RLL3              	8.16%		
B9RXP3              	7.84%		
B9RXP4              	6.87%		
B9S1M4              	6.77%		
B9SDG5              	6.34%		
B9SDH3              	6.23%		
B9SDG7              	6.12%		
B9R7J5              	5.48%		
B9SDH1              	5.48%		
B9SDG8              	5.37%		
B9SDH2              	5.37%		
B9SDG6              	5.26%		
B9S1Z5              	5.16%		
Bootstrap support for B9SRN5 as seed ortholog is 91%.
Bootstrap support for A3LYQ1 as seed ortholog is 100%.

Group of orthologs #1485. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:110 S.stipitis:110

B9S6A8              	100.00%		A3LZL8              	100.00%
B9RY61              	7.04%		
B9RFP7              	5.63%		
Bootstrap support for B9S6A8 as seed ortholog is 100%.
Bootstrap support for A3LZL8 as seed ortholog is 100%.

Group of orthologs #1486. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:6 S.stipitis:110

B9RGG1              	100.00%		A3LUR1              	100.00%
Bootstrap support for B9RGG1 as seed ortholog is 59%.
Alternative seed ortholog is B9RWG7 (6 bits away from this cluster)
Bootstrap support for A3LUR1 as seed ortholog is 100%.

Group of orthologs #1487. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:110 S.stipitis:110

B9S002              	100.00%		A3GEU6              	100.00%
Bootstrap support for B9S002 as seed ortholog is 100%.
Bootstrap support for A3GEU6 as seed ortholog is 100%.

Group of orthologs #1488. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:110 S.stipitis:110

B9S3E9              	100.00%		A3GGJ1              	100.00%
Bootstrap support for B9S3E9 as seed ortholog is 100%.
Bootstrap support for A3GGJ1 as seed ortholog is 100%.

Group of orthologs #1489. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:110 S.stipitis:110

B9S5B8              	100.00%		A3LW92              	100.00%
Bootstrap support for B9S5B8 as seed ortholog is 100%.
Bootstrap support for A3LW92 as seed ortholog is 100%.

Group of orthologs #1490. Best score 110 bits
Score difference with first non-orthologous sequence - R.communis:110 S.stipitis:110

B9SAF4              	100.00%		A3LX04              	100.00%
Bootstrap support for B9SAF4 as seed ortholog is 100%.
Bootstrap support for A3LX04 as seed ortholog is 100%.

Group of orthologs #1491. Best score 109 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:7

B9S9A5              	100.00%		A3LT08              	100.00%
B9R9Y4              	17.98%		A3GGN1              	6.10%
B9T2E2              	15.80%		
B9R6T0              	13.85%		
Bootstrap support for B9S9A5 as seed ortholog is 100%.
Bootstrap support for A3LT08 as seed ortholog is 57%.
Alternative seed ortholog is A3LZX1 (7 bits away from this cluster)

Group of orthologs #1492. Best score 109 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:109

B9R7B2              	100.00%		A3LT64              	100.00%
Bootstrap support for B9R7B2 as seed ortholog is 100%.
Bootstrap support for A3LT64 as seed ortholog is 100%.

Group of orthologs #1493. Best score 109 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:109

B9RD99              	100.00%		A3LSY4              	100.00%
Bootstrap support for B9RD99 as seed ortholog is 100%.
Bootstrap support for A3LSY4 as seed ortholog is 100%.

Group of orthologs #1494. Best score 109 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:109

B9REC9              	100.00%		A3LTT4              	100.00%
Bootstrap support for B9REC9 as seed ortholog is 100%.
Bootstrap support for A3LTT4 as seed ortholog is 100%.

Group of orthologs #1495. Best score 109 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:109

B9RS37              	100.00%		A3LZ74              	100.00%
Bootstrap support for B9RS37 as seed ortholog is 100%.
Bootstrap support for A3LZ74 as seed ortholog is 100%.

Group of orthologs #1496. Best score 109 bits
Score difference with first non-orthologous sequence - R.communis:109 S.stipitis:109

B9S178              	100.00%		A3M0C7              	100.00%
Bootstrap support for B9S178 as seed ortholog is 100%.
Bootstrap support for A3M0C7 as seed ortholog is 100%.

Group of orthologs #1497. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9SAS1              	100.00%		A3LS82              	100.00%
B9RT70              	83.33%		
B9RFC4              	82.64%		
Bootstrap support for B9SAS1 as seed ortholog is 100%.
Bootstrap support for A3LS82 as seed ortholog is 100%.

Group of orthologs #1498. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9RGB8              	100.00%		A3LU38              	100.00%
B9SB30              	35.29%		
Bootstrap support for B9RGB8 as seed ortholog is 100%.
Bootstrap support for A3LU38 as seed ortholog is 100%.

Group of orthologs #1499. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9S849              	100.00%		A3LMY2              	100.00%
B9S864              	71.63%		
Bootstrap support for B9S849 as seed ortholog is 100%.
Bootstrap support for A3LMY2 as seed ortholog is 100%.

Group of orthologs #1500. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9RFR6              	100.00%		A3GID0              	100.00%
Bootstrap support for B9RFR6 as seed ortholog is 100%.
Bootstrap support for A3GID0 as seed ortholog is 100%.

Group of orthologs #1501. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9RHN9              	100.00%		A3LT87              	100.00%
Bootstrap support for B9RHN9 as seed ortholog is 100%.
Bootstrap support for A3LT87 as seed ortholog is 100%.

Group of orthologs #1502. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9RMM1              	100.00%		A3LSJ7              	100.00%
Bootstrap support for B9RMM1 as seed ortholog is 100%.
Bootstrap support for A3LSJ7 as seed ortholog is 100%.

Group of orthologs #1503. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9RYN7              	100.00%		A3LU02              	100.00%
Bootstrap support for B9RYN7 as seed ortholog is 100%.
Bootstrap support for A3LU02 as seed ortholog is 100%.

Group of orthologs #1504. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9S067              	100.00%		A3LUC2              	100.00%
Bootstrap support for B9S067 as seed ortholog is 100%.
Bootstrap support for A3LUC2 as seed ortholog is 100%.

Group of orthologs #1505. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9S615              	100.00%		A3LU01              	100.00%
Bootstrap support for B9S615 as seed ortholog is 100%.
Bootstrap support for A3LU01 as seed ortholog is 100%.

Group of orthologs #1506. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9S501              	100.00%		A3LZH3              	100.00%
Bootstrap support for B9S501 as seed ortholog is 100%.
Bootstrap support for A3LZH3 as seed ortholog is 100%.

Group of orthologs #1507. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9SJZ8              	100.00%		A3LVE0              	100.00%
Bootstrap support for B9SJZ8 as seed ortholog is 100%.
Bootstrap support for A3LVE0 as seed ortholog is 100%.

Group of orthologs #1508. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:108 S.stipitis:108

B9SNA2              	100.00%		A3LVR8              	100.00%
Bootstrap support for B9SNA2 as seed ortholog is 100%.
Bootstrap support for A3LVR8 as seed ortholog is 100%.

Group of orthologs #1509. Best score 108 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:108

G1D794              	100.00%		A3LWK9              	100.00%
Bootstrap support for G1D794 as seed ortholog is 91%.
Bootstrap support for A3LWK9 as seed ortholog is 100%.

Group of orthologs #1510. Best score 107 bits
Score difference with first non-orthologous sequence - R.communis:38 S.stipitis:107

B9S420              	100.00%		A3GF68              	100.00%
B9RTY8              	72.74%		
Bootstrap support for B9S420 as seed ortholog is 89%.
Bootstrap support for A3GF68 as seed ortholog is 100%.

Group of orthologs #1511. Best score 107 bits
Score difference with first non-orthologous sequence - R.communis:11 S.stipitis:18

B9SFA4              	100.00%		A3LWC8              	100.00%
B9RB02              	39.00%		
Bootstrap support for B9SFA4 as seed ortholog is 76%.
Bootstrap support for A3LWC8 as seed ortholog is 86%.

Group of orthologs #1512. Best score 107 bits
Score difference with first non-orthologous sequence - R.communis:107 S.stipitis:107

B9R7S7              	100.00%		A3GFI7              	100.00%
Bootstrap support for B9R7S7 as seed ortholog is 100%.
Bootstrap support for A3GFI7 as seed ortholog is 100%.

Group of orthologs #1513. Best score 107 bits
Score difference with first non-orthologous sequence - R.communis:107 S.stipitis:107

B9R9J0              	100.00%		A3LN14              	100.00%
Bootstrap support for B9R9J0 as seed ortholog is 100%.
Bootstrap support for A3LN14 as seed ortholog is 100%.

Group of orthologs #1514. Best score 107 bits
Score difference with first non-orthologous sequence - R.communis:107 S.stipitis:107

B9SUY5              	100.00%		A3LZL2              	100.00%
Bootstrap support for B9SUY5 as seed ortholog is 100%.
Bootstrap support for A3LZL2 as seed ortholog is 100%.

Group of orthologs #1515. Best score 107 bits
Score difference with first non-orthologous sequence - R.communis:107 S.stipitis:107

B9TPL1              	100.00%		A3LX17              	100.00%
Bootstrap support for B9TPL1 as seed ortholog is 100%.
Bootstrap support for A3LX17 as seed ortholog is 100%.

Group of orthologs #1516. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:106

B9SJL5              	100.00%		A3LS39              	100.00%
B9T642              	100.00%		A3GG90              	100.00%
B9S6G9              	58.80%		
B9SUC7              	45.03%		
B9SUY7              	44.03%		
B9RB41              	5.68%		
Bootstrap support for B9SJL5 as seed ortholog is 100%.
Bootstrap support for B9T642 as seed ortholog is 100%.
Bootstrap support for A3LS39 as seed ortholog is 100%.
Bootstrap support for A3GG90 as seed ortholog is 100%.

Group of orthologs #1517. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:22 S.stipitis:106

B9T6V1              	100.00%		A3LNI8              	100.00%
B9T8C2              	29.41%		
B9S6Q8              	23.72%		
B9ST08              	9.87%		
Bootstrap support for B9T6V1 as seed ortholog is 84%.
Bootstrap support for A3LNI8 as seed ortholog is 100%.

Group of orthologs #1518. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:7 S.stipitis:46

B9THV7              	100.00%		A3GGB2              	100.00%
B9TNI3              	22.49%		A3GGB1              	64.49%
Bootstrap support for B9THV7 as seed ortholog is 60%.
Alternative seed ortholog is B9RM44 (7 bits away from this cluster)
Bootstrap support for A3GGB2 as seed ortholog is 94%.

Group of orthologs #1519. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:4 S.stipitis:106

B9SP90              	100.00%		A3LZ99              	100.00%
                    	       		A3LT50              	6.07%
Bootstrap support for B9SP90 as seed ortholog is 54%.
Alternative seed ortholog is B9T255 (4 bits away from this cluster)
Bootstrap support for A3LZ99 as seed ortholog is 100%.

Group of orthologs #1520. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:106

B9T3X9              	100.00%		A3LUZ3              	100.00%
B9RJ76              	15.35%		
Bootstrap support for B9T3X9 as seed ortholog is 100%.
Bootstrap support for A3LUZ3 as seed ortholog is 100%.

Group of orthologs #1521. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:106

B9T7U4              	100.00%		A3LUV1              	100.00%
B9T024              	80.27%		
Bootstrap support for B9T7U4 as seed ortholog is 100%.
Bootstrap support for A3LUV1 as seed ortholog is 100%.

Group of orthologs #1522. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:27 S.stipitis:106

B9RK31              	100.00%		A3GIA5              	100.00%
Bootstrap support for B9RK31 as seed ortholog is 80%.
Bootstrap support for A3GIA5 as seed ortholog is 100%.

Group of orthologs #1523. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:106

B9RD93              	100.00%		A3LUG3              	100.00%
Bootstrap support for B9RD93 as seed ortholog is 100%.
Bootstrap support for A3LUG3 as seed ortholog is 100%.

Group of orthologs #1524. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:106

B9RPU3              	100.00%		A3LMS7              	100.00%
Bootstrap support for B9RPU3 as seed ortholog is 100%.
Bootstrap support for A3LMS7 as seed ortholog is 100%.

Group of orthologs #1525. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:106 S.stipitis:106

B9RYL4              	100.00%		A3LQ63              	100.00%
Bootstrap support for B9RYL4 as seed ortholog is 100%.
Bootstrap support for A3LQ63 as seed ortholog is 100%.

Group of orthologs #1526. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:106

B9S535              	100.00%		A3LQP6              	100.00%
Bootstrap support for B9S535 as seed ortholog is 98%.
Bootstrap support for A3LQP6 as seed ortholog is 100%.

Group of orthologs #1527. Best score 106 bits
Score difference with first non-orthologous sequence - R.communis:28 S.stipitis:106

B9THJ5              	100.00%		A3GF19              	100.00%
Bootstrap support for B9THJ5 as seed ortholog is 69%.
Alternative seed ortholog is B9RB71 (28 bits away from this cluster)
Bootstrap support for A3GF19 as seed ortholog is 100%.

Group of orthologs #1528. Best score 105 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:105

B9R9T0              	100.00%		A3LSU0              	100.00%
Bootstrap support for B9R9T0 as seed ortholog is 100%.
Bootstrap support for A3LSU0 as seed ortholog is 100%.

Group of orthologs #1529. Best score 105 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:105

B9RK73              	100.00%		A3LSY0              	100.00%
Bootstrap support for B9RK73 as seed ortholog is 100%.
Bootstrap support for A3LSY0 as seed ortholog is 100%.

Group of orthologs #1530. Best score 105 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:42

B9RVP3              	100.00%		A3LX93              	100.00%
Bootstrap support for B9RVP3 as seed ortholog is 100%.
Bootstrap support for A3LX93 as seed ortholog is 99%.

Group of orthologs #1531. Best score 105 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:105

B9ST41              	100.00%		A3LR02              	100.00%
Bootstrap support for B9ST41 as seed ortholog is 100%.
Bootstrap support for A3LR02 as seed ortholog is 100%.

Group of orthologs #1532. Best score 105 bits
Score difference with first non-orthologous sequence - R.communis:105 S.stipitis:105

B9SR05              	100.00%		A3LUA1              	100.00%
Bootstrap support for B9SR05 as seed ortholog is 100%.
Bootstrap support for A3LUA1 as seed ortholog is 100%.

Group of orthologs #1533. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9S972              	100.00%		A3GIC5              	100.00%
B9RB13              	33.99%		A3GIC1              	27.49%
B9SQ29              	13.79%		
B9SQ27              	10.84%		
B9T5X7              	10.10%		
Bootstrap support for B9S972 as seed ortholog is 100%.
Bootstrap support for A3GIC5 as seed ortholog is 100%.

Group of orthologs #1534. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9SRJ7              	100.00%		A3LN34              	100.00%
B9T3A9              	49.57%		
B9SRT2              	36.13%		
Bootstrap support for B9SRJ7 as seed ortholog is 100%.
Bootstrap support for A3LN34 as seed ortholog is 100%.

Group of orthologs #1535. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9RG43              	100.00%		A3GF33              	100.00%
Bootstrap support for B9RG43 as seed ortholog is 100%.
Bootstrap support for A3GF33 as seed ortholog is 100%.

Group of orthologs #1536. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:35 S.stipitis:37

B9RE59              	100.00%		A3LNC6              	100.00%
Bootstrap support for B9RE59 as seed ortholog is 95%.
Bootstrap support for A3LNC6 as seed ortholog is 93%.

Group of orthologs #1537. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9RKH2              	100.00%		A3LT09              	100.00%
Bootstrap support for B9RKH2 as seed ortholog is 100%.
Bootstrap support for A3LT09 as seed ortholog is 100%.

Group of orthologs #1538. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9RRZ0              	100.00%		A3M0I6              	100.00%
Bootstrap support for B9RRZ0 as seed ortholog is 100%.
Bootstrap support for A3M0I6 as seed ortholog is 100%.

Group of orthologs #1539. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9S5T2              	100.00%		A3LNE7              	100.00%
Bootstrap support for B9S5T2 as seed ortholog is 100%.
Bootstrap support for A3LNE7 as seed ortholog is 100%.

Group of orthologs #1540. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9SAP2              	100.00%		A3LPF4              	100.00%
Bootstrap support for B9SAP2 as seed ortholog is 100%.
Bootstrap support for A3LPF4 as seed ortholog is 100%.

Group of orthologs #1541. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9SHQ0              	100.00%		A3GH76              	100.00%
Bootstrap support for B9SHQ0 as seed ortholog is 100%.
Bootstrap support for A3GH76 as seed ortholog is 100%.

Group of orthologs #1542. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:104

B9SUL6              	100.00%		A3LZB9              	100.00%
Bootstrap support for B9SUL6 as seed ortholog is 96%.
Bootstrap support for A3LZB9 as seed ortholog is 100%.

Group of orthologs #1543. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9SYM9              	100.00%		A3LZR7              	100.00%
Bootstrap support for B9SYM9 as seed ortholog is 100%.
Bootstrap support for A3LZR7 as seed ortholog is 100%.

Group of orthologs #1544. Best score 104 bits
Score difference with first non-orthologous sequence - R.communis:104 S.stipitis:104

B9TH26              	100.00%		A3LZU6              	100.00%
Bootstrap support for B9TH26 as seed ortholog is 100%.
Bootstrap support for A3LZU6 as seed ortholog is 100%.

Group of orthologs #1545. Best score 103 bits
Score difference with first non-orthologous sequence - R.communis:103 S.stipitis:103

B9SUV1              	100.00%		A3LNQ9              	100.00%
B9S704              	39.06%		
B9SYF6              	26.18%		
Bootstrap support for B9SUV1 as seed ortholog is 100%.
Bootstrap support for A3LNQ9 as seed ortholog is 100%.

Group of orthologs #1546. Best score 103 bits
Score difference with first non-orthologous sequence - R.communis:103 S.stipitis:103

B9T6D7              	100.00%		A3LR97              	100.00%
B9RHC9              	33.14%		
Bootstrap support for B9T6D7 as seed ortholog is 100%.
Bootstrap support for A3LR97 as seed ortholog is 100%.

Group of orthologs #1547. Best score 103 bits
Score difference with first non-orthologous sequence - R.communis:103 S.stipitis:103

B9SL79              	100.00%		A3GF23              	100.00%
Bootstrap support for B9SL79 as seed ortholog is 100%.
Bootstrap support for A3GF23 as seed ortholog is 100%.

Group of orthologs #1548. Best score 103 bits
Score difference with first non-orthologous sequence - R.communis:103 S.stipitis:103

B9SLT5              	100.00%		A3LYB6              	100.00%
Bootstrap support for B9SLT5 as seed ortholog is 100%.
Bootstrap support for A3LYB6 as seed ortholog is 100%.

Group of orthologs #1549. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:102

B9SH78              	100.00%		A3LSV7              	100.00%
B9SH79              	70.15%		
B9SMI4              	16.14%		
B9SFD5              	11.03%		
B9RW85              	10.34%		
Bootstrap support for B9SH78 as seed ortholog is 100%.
Bootstrap support for A3LSV7 as seed ortholog is 100%.

Group of orthologs #1550. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:45

B9SNS6              	100.00%		A3GHK9              	100.00%
B9S229              	56.63%		
B9RGU3              	37.11%		
Bootstrap support for B9SNS6 as seed ortholog is 100%.
Bootstrap support for A3GHK9 as seed ortholog is 95%.

Group of orthologs #1551. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:102

B9REX0              	100.00%		A3LWB7              	100.00%
Bootstrap support for B9REX0 as seed ortholog is 100%.
Bootstrap support for A3LWB7 as seed ortholog is 100%.

Group of orthologs #1552. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:102

B9RSS9              	100.00%		A3LVL2              	100.00%
Bootstrap support for B9RSS9 as seed ortholog is 100%.
Bootstrap support for A3LVL2 as seed ortholog is 100%.

Group of orthologs #1553. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:102

B9T0Z6              	100.00%		A3GEV7              	100.00%
Bootstrap support for B9T0Z6 as seed ortholog is 100%.
Bootstrap support for A3GEV7 as seed ortholog is 100%.

Group of orthologs #1554. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:102 S.stipitis:102

B9T277              	100.00%		A3LV76              	100.00%
Bootstrap support for B9T277 as seed ortholog is 100%.
Bootstrap support for A3LV76 as seed ortholog is 100%.

Group of orthologs #1555. Best score 102 bits
Score difference with first non-orthologous sequence - R.communis:20 S.stipitis:102

B9TBJ2              	100.00%		A3LZZ4              	100.00%
Bootstrap support for B9TBJ2 as seed ortholog is 72%.
Alternative seed ortholog is B9S9I2 (20 bits away from this cluster)
Bootstrap support for A3LZZ4 as seed ortholog is 100%.

Group of orthologs #1556. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:20 S.stipitis:101

B9SEB4              	100.00%		A3LY49              	100.00%
B9S6B8              	62.89%		
B9R7Y0              	34.25%		
B9T450              	24.74%		
B9RY37              	12.49%		
B9SKJ4              	12.26%		
B9SAF0              	11.11%		
B9SC56              	10.88%		
B9SLV1              	10.65%		
B9SN45              	10.19%		
B9RYI0              	10.08%		
B9SIU0              	10.08%		
B9R9F1              	9.62%		
B9RC34              	9.51%		
B9RHG4              	9.39%		
B9SBP0              	9.28%		
B9SV76              	9.28%		
B9ST44              	9.16%		
B9R7C1              	8.93%		
B9S6I4              	8.71%		
B9RLE4              	8.59%		
B9SPT3              	8.48%		
B9SPR3              	8.36%		
B9R8M6              	8.13%		
B9SV74              	8.13%		
B9SLD0              	7.90%		
B9SAB8              	7.67%		
B9S685              	7.33%		
B9SPD1              	7.33%		
B9SF17              	7.22%		
B9SJJ5              	6.99%		
B9S713              	6.87%		
Bootstrap support for B9SEB4 as seed ortholog is 65%.
Alternative seed ortholog is B9R7R2 (20 bits away from this cluster)
Bootstrap support for A3LY49 as seed ortholog is 100%.

Group of orthologs #1557. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:101

B9RFE5              	100.00%		A3LVS5              	100.00%
B9SL32              	31.21%		
B9RSU6              	8.25%		
B9SET7              	5.36%		
Bootstrap support for B9RFE5 as seed ortholog is 87%.
Bootstrap support for A3LVS5 as seed ortholog is 100%.

Group of orthologs #1558. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:34

B9S3J1              	100.00%		A3LZR4              	100.00%
B9T214              	63.14%		
B9RXZ4              	37.89%		
B9SKQ5              	26.55%		
Bootstrap support for B9S3J1 as seed ortholog is 100%.
Bootstrap support for A3LZR4 as seed ortholog is 90%.

Group of orthologs #1559. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:101

B9RXU7              	100.00%		A3GIA8              	100.00%
B9RD20              	19.53%		
Bootstrap support for B9RXU7 as seed ortholog is 100%.
Bootstrap support for A3GIA8 as seed ortholog is 100%.

Group of orthologs #1560. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:101

B9SEW6              	100.00%		A3GGS4              	100.00%
B9RKT7              	18.03%		
Bootstrap support for B9SEW6 as seed ortholog is 100%.
Bootstrap support for A3GGS4 as seed ortholog is 100%.

Group of orthologs #1561. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:37 S.stipitis:101

B9SWW1              	100.00%		A3LSE2              	100.00%
B9RCS4              	82.14%		
Bootstrap support for B9SWW1 as seed ortholog is 79%.
Bootstrap support for A3LSE2 as seed ortholog is 100%.

Group of orthologs #1562. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:101

B9RHF7              	100.00%		A3LVG0              	100.00%
Bootstrap support for B9RHF7 as seed ortholog is 99%.
Bootstrap support for A3LVG0 as seed ortholog is 100%.

Group of orthologs #1563. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:101

B9RQH8              	100.00%		A3LNH6              	100.00%
Bootstrap support for B9RQH8 as seed ortholog is 100%.
Bootstrap support for A3LNH6 as seed ortholog is 100%.

Group of orthologs #1564. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:101

B9RPJ0              	100.00%		A3LSE6              	100.00%
Bootstrap support for B9RPJ0 as seed ortholog is 100%.
Bootstrap support for A3LSE6 as seed ortholog is 100%.

Group of orthologs #1565. Best score 101 bits
Score difference with first non-orthologous sequence - R.communis:101 S.stipitis:101

B9T3C0              	100.00%		A3GGI8              	100.00%
Bootstrap support for B9T3C0 as seed ortholog is 100%.
Bootstrap support for A3GGI8 as seed ortholog is 100%.

Group of orthologs #1566. Best score 100 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:6

B9SKS8              	100.00%		A3LUK8              	100.00%
B9T316              	54.42%		
B9T0P6              	28.17%		
B9SRA9              	14.08%		
B9SRA8              	13.70%		
B9S6X0              	12.68%		
B9SKI4              	11.27%		
B9SRB0              	8.71%		
Bootstrap support for B9SKS8 as seed ortholog is 100%.
Bootstrap support for A3LUK8 as seed ortholog is 95%.

Group of orthologs #1567. Best score 100 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:100

B9RSS4              	100.00%		A3GGL9              	100.00%
B9SFP3              	69.97%		A3LVQ9              	28.08%
B9RSS3              	51.91%		
B9RSS2              	51.40%		
Bootstrap support for B9RSS4 as seed ortholog is 100%.
Bootstrap support for A3GGL9 as seed ortholog is 100%.

Group of orthologs #1568. Best score 100 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:100

B9RZC6              	100.00%		A3LV02              	100.00%
B9R7P6              	45.11%		
B2LWM3              	10.73%		
B9RIB8              	9.15%		
B9RIB7              	8.68%		
Bootstrap support for B9RZC6 as seed ortholog is 100%.
Bootstrap support for A3LV02 as seed ortholog is 100%.

Group of orthologs #1569. Best score 100 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:100

B9RB31              	100.00%		A3GFJ8              	100.00%
Bootstrap support for B9RB31 as seed ortholog is 100%.
Bootstrap support for A3GFJ8 as seed ortholog is 100%.

Group of orthologs #1570. Best score 100 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:100

B9RWA0              	100.00%		A3LWG6              	100.00%
Bootstrap support for B9RWA0 as seed ortholog is 100%.
Bootstrap support for A3LWG6 as seed ortholog is 100%.

Group of orthologs #1571. Best score 100 bits
Score difference with first non-orthologous sequence - R.communis:100 S.stipitis:100

B9SEL3              	100.00%		A3LN29              	100.00%
Bootstrap support for B9SEL3 as seed ortholog is 100%.
Bootstrap support for A3LN29 as seed ortholog is 100%.

Group of orthologs #1572. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:8

B9RKM9              	100.00%		A3GGN9              	100.00%
B9SRG0              	39.19%		
Bootstrap support for B9RKM9 as seed ortholog is 100%.
Bootstrap support for A3GGN9 as seed ortholog is 62%.
Alternative seed ortholog is A3GFW7 (8 bits away from this cluster)

Group of orthologs #1573. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:99

B9RMA1              	100.00%		A3LWE2              	100.00%
B9TD71              	10.82%		
Bootstrap support for B9RMA1 as seed ortholog is 100%.
Bootstrap support for A3LWE2 as seed ortholog is 100%.

Group of orthologs #1574. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:99

B9S266              	100.00%		A3GFY5              	100.00%
Bootstrap support for B9S266 as seed ortholog is 100%.
Bootstrap support for A3GFY5 as seed ortholog is 100%.

Group of orthologs #1575. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:32

B9RNT1              	100.00%		A3M099              	100.00%
Bootstrap support for B9RNT1 as seed ortholog is 100%.
Bootstrap support for A3M099 as seed ortholog is 90%.

Group of orthologs #1576. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:99

B9S1I4              	100.00%		A3LQK7              	100.00%
Bootstrap support for B9S1I4 as seed ortholog is 100%.
Bootstrap support for A3LQK7 as seed ortholog is 100%.

Group of orthologs #1577. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:99

B9SF39              	100.00%		A3LNF7              	100.00%
Bootstrap support for B9SF39 as seed ortholog is 100%.
Bootstrap support for A3LNF7 as seed ortholog is 100%.

Group of orthologs #1578. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:99

B9SAN6              	100.00%		A3LVK7              	100.00%
Bootstrap support for B9SAN6 as seed ortholog is 100%.
Bootstrap support for A3LVK7 as seed ortholog is 100%.

Group of orthologs #1579. Best score 99 bits
Score difference with first non-orthologous sequence - R.communis:99 S.stipitis:99

B9SV47              	100.00%		A3LVF9              	100.00%
Bootstrap support for B9SV47 as seed ortholog is 100%.
Bootstrap support for A3LVF9 as seed ortholog is 100%.

Group of orthologs #1580. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9SEJ7              	100.00%		A3LX37              	100.00%
B9RNK0              	73.11%		A3LPG9              	31.78%
Bootstrap support for B9SEJ7 as seed ortholog is 100%.
Bootstrap support for A3LX37 as seed ortholog is 100%.

Group of orthologs #1581. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9RFG2              	100.00%		A3LTG0              	100.00%
B9SAX1              	58.30%		
Bootstrap support for B9RFG2 as seed ortholog is 100%.
Bootstrap support for A3LTG0 as seed ortholog is 100%.

Group of orthologs #1582. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9RK08              	100.00%		A3LQB4              	100.00%
B9T591              	13.69%		
Bootstrap support for B9RK08 as seed ortholog is 100%.
Bootstrap support for A3LQB4 as seed ortholog is 100%.

Group of orthologs #1583. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9S446              	100.00%		A3GF34              	100.00%
B9SPE2              	43.13%		
Bootstrap support for B9S446 as seed ortholog is 100%.
Bootstrap support for A3GF34 as seed ortholog is 100%.

Group of orthologs #1584. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9RK06              	100.00%		A3M098              	100.00%
Bootstrap support for B9RK06 as seed ortholog is 100%.
Bootstrap support for A3M098 as seed ortholog is 100%.

Group of orthologs #1585. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9RUP4              	100.00%		A3LW90              	100.00%
Bootstrap support for B9RUP4 as seed ortholog is 100%.
Bootstrap support for A3LW90 as seed ortholog is 100%.

Group of orthologs #1586. Best score 98 bits
Score difference with first non-orthologous sequence - R.communis:98 S.stipitis:98

B9SMZ0              	100.00%		A3GGA3              	100.00%
Bootstrap support for B9SMZ0 as seed ortholog is 100%.
Bootstrap support for A3GGA3 as seed ortholog is 100%.

Group of orthologs #1587. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:52

B9T916              	100.00%		A3LTP4              	100.00%
B9RTJ8              	34.60%		
B9RXY6              	33.18%		
B9REQ1              	31.99%		
B9RTJ6              	31.99%		
B9REP6              	29.86%		
B9REP8              	28.44%		
B9REP7              	28.44%		
B9TB87              	16.11%		
B9REP9              	11.37%		
Bootstrap support for B9T916 as seed ortholog is 100%.
Bootstrap support for A3LTP4 as seed ortholog is 93%.

Group of orthologs #1588. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:97

B9SL24              	100.00%		A3LPR9              	100.00%
B9S732              	36.51%		
B9SAY7              	36.11%		
B9SHD9              	33.99%		
B9S729              	32.41%		
B9RHZ6              	29.63%		
B9T1B9              	24.74%		
Bootstrap support for B9SL24 as seed ortholog is 92%.
Bootstrap support for A3LPR9 as seed ortholog is 100%.

Group of orthologs #1589. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:26 S.stipitis:97

B9R813              	100.00%		A3GI91              	100.00%
B9T7B2              	100.00%		
B9SRR4              	7.53%		
Bootstrap support for B9R813 as seed ortholog is 95%.
Bootstrap support for B9T7B2 as seed ortholog is 95%.
Bootstrap support for A3GI91 as seed ortholog is 100%.

Group of orthologs #1590. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:97

B9SF26              	100.00%		A3LQG7              	100.00%
B9T1Q6              	100.00%		A3LZA6              	12.32%
Bootstrap support for B9SF26 as seed ortholog is 79%.
Bootstrap support for B9T1Q6 as seed ortholog is 78%.
Bootstrap support for A3LQG7 as seed ortholog is 100%.

Group of orthologs #1591. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:35

B9RD97              	100.00%		A3LPU2              	100.00%
                    	       		A3LWL7              	19.56%
Bootstrap support for B9RD97 as seed ortholog is 100%.
Bootstrap support for A3LPU2 as seed ortholog is 82%.

Group of orthologs #1592. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:97

B9RF71              	100.00%		A3LRG2              	100.00%
B9RT26              	48.66%		
Bootstrap support for B9RF71 as seed ortholog is 91%.
Bootstrap support for A3LRG2 as seed ortholog is 100%.

Group of orthologs #1593. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9RK59              	100.00%		A3LPN7              	100.00%
                    	       		A3LVS6              	100.00%
Bootstrap support for B9RK59 as seed ortholog is 100%.
Bootstrap support for A3LPN7 as seed ortholog is 100%.
Bootstrap support for A3LVS6 as seed ortholog is 100%.

Group of orthologs #1594. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9RAJ4              	100.00%		A3LUD8              	100.00%
Bootstrap support for B9RAJ4 as seed ortholog is 100%.
Bootstrap support for A3LUD8 as seed ortholog is 100%.

Group of orthologs #1595. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9RC25              	100.00%		A3LYF5              	100.00%
Bootstrap support for B9RC25 as seed ortholog is 100%.
Bootstrap support for A3LYF5 as seed ortholog is 100%.

Group of orthologs #1596. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:97

B9RC88              	100.00%		A3M0J2              	100.00%
Bootstrap support for B9RC88 as seed ortholog is 99%.
Bootstrap support for A3M0J2 as seed ortholog is 100%.

Group of orthologs #1597. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9S201              	100.00%		A3LXT9              	100.00%
Bootstrap support for B9S201 as seed ortholog is 100%.
Bootstrap support for A3LXT9 as seed ortholog is 100%.

Group of orthologs #1598. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:3 S.stipitis:97

B9SAC8              	100.00%		A3LUD6              	100.00%
Bootstrap support for B9SAC8 as seed ortholog is 50%.
Alternative seed ortholog is B9STR7 (3 bits away from this cluster)
Bootstrap support for A3LUD6 as seed ortholog is 100%.

Group of orthologs #1599. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:4

B9SD10              	100.00%		A3LTU5              	100.00%
Bootstrap support for B9SD10 as seed ortholog is 89%.
Bootstrap support for A3LTU5 as seed ortholog is 46%.
Alternative seed ortholog is A3LTK6 (4 bits away from this cluster)

Group of orthologs #1600. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9SCL8              	100.00%		A3LVH5              	100.00%
Bootstrap support for B9SCL8 as seed ortholog is 100%.
Bootstrap support for A3LVH5 as seed ortholog is 100%.

Group of orthologs #1601. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9SHG4              	100.00%		A3LR66              	100.00%
Bootstrap support for B9SHG4 as seed ortholog is 100%.
Bootstrap support for A3LR66 as seed ortholog is 100%.

Group of orthologs #1602. Best score 97 bits
Score difference with first non-orthologous sequence - R.communis:97 S.stipitis:97

B9THQ2              	100.00%		A3GEY6              	100.00%
Bootstrap support for B9THQ2 as seed ortholog is 100%.
Bootstrap support for A3GEY6 as seed ortholog is 100%.

Group of orthologs #1603. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9R9H3              	100.00%		A3LVG5              	100.00%
B9RI31              	33.55%		A3LVJ2              	16.41%
B9RI32              	26.97%		
Bootstrap support for B9R9H3 as seed ortholog is 100%.
Bootstrap support for A3LVG5 as seed ortholog is 100%.

Group of orthologs #1604. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:21 S.stipitis:96

B9T698              	100.00%		A3LPE1              	100.00%
                    	       		A3LVX4              	83.00%
                    	       		A3LVX5              	81.50%
                    	       		A3LX83              	24.75%
Bootstrap support for B9T698 as seed ortholog is 82%.
Bootstrap support for A3LPE1 as seed ortholog is 100%.

Group of orthologs #1605. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:4 S.stipitis:96

B9RID0              	100.00%		A3LWW9              	100.00%
B9RVQ7              	18.55%		
B9RK30              	5.16%		
Bootstrap support for B9RID0 as seed ortholog is 46%.
Alternative seed ortholog is B9SB33 (4 bits away from this cluster)
Bootstrap support for A3LWW9 as seed ortholog is 100%.

Group of orthologs #1606. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:26

B9SCV7              	100.00%		A3LTX1              	100.00%
B9SCU3              	54.55%		
B9T7A1              	28.71%		
Bootstrap support for B9SCV7 as seed ortholog is 100%.
Bootstrap support for A3LTX1 as seed ortholog is 75%.

Group of orthologs #1607. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:8 S.stipitis:96

B9SFB1              	100.00%		A3LTI1              	100.00%
B9SRC3              	18.57%		
B9T1W8              	5.12%		
Bootstrap support for B9SFB1 as seed ortholog is 61%.
Alternative seed ortholog is B9SUI1 (8 bits away from this cluster)
Bootstrap support for A3LTI1 as seed ortholog is 100%.

Group of orthologs #1608. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9SBD8              	100.00%		A3LRJ2              	100.00%
B9RYR2              	24.48%		
Bootstrap support for B9SBD8 as seed ortholog is 100%.
Bootstrap support for A3LRJ2 as seed ortholog is 100%.

Group of orthologs #1609. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9S9V1              	100.00%		A3LUC5              	100.00%
B9SAJ5              	35.33%		
Bootstrap support for B9S9V1 as seed ortholog is 100%.
Bootstrap support for A3LUC5 as seed ortholog is 100%.

Group of orthologs #1610. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9S9Y9              	100.00%		A3LUU2              	100.00%
B9T0H9              	100.00%		
Bootstrap support for B9S9Y9 as seed ortholog is 99%.
Bootstrap support for B9T0H9 as seed ortholog is 99%.
Bootstrap support for A3LUU2 as seed ortholog is 99%.

Group of orthologs #1611. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9S937              	100.00%		A3LY08              	100.00%
B9S238              	10.75%		
Bootstrap support for B9S937 as seed ortholog is 100%.
Bootstrap support for A3LY08 as seed ortholog is 100%.

Group of orthologs #1612. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9REW0              	100.00%		A3LTK3              	100.00%
Bootstrap support for B9REW0 as seed ortholog is 100%.
Bootstrap support for A3LTK3 as seed ortholog is 100%.

Group of orthologs #1613. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9RSN7              	100.00%		A3GG29              	100.00%
Bootstrap support for B9RSN7 as seed ortholog is 100%.
Bootstrap support for A3GG29 as seed ortholog is 100%.

Group of orthologs #1614. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9S5Y6              	100.00%		A3GH72              	100.00%
Bootstrap support for B9S5Y6 as seed ortholog is 100%.
Bootstrap support for A3GH72 as seed ortholog is 100%.

Group of orthologs #1615. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9S5F1              	100.00%		A3LVP7              	100.00%
Bootstrap support for B9S5F1 as seed ortholog is 100%.
Bootstrap support for A3LVP7 as seed ortholog is 100%.

Group of orthologs #1616. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9SHL9              	100.00%		A3GG28              	100.00%
Bootstrap support for B9SHL9 as seed ortholog is 100%.
Bootstrap support for A3GG28 as seed ortholog is 100%.

Group of orthologs #1617. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9SJ60              	100.00%		A3GGS7              	100.00%
Bootstrap support for B9SJ60 as seed ortholog is 100%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #1618. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:46 S.stipitis:96

B9SNU1              	100.00%		A3GHG7              	100.00%
Bootstrap support for B9SNU1 as seed ortholog is 80%.
Bootstrap support for A3GHG7 as seed ortholog is 100%.

Group of orthologs #1619. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:96 S.stipitis:96

B9T288              	100.00%		A3LQI3              	100.00%
Bootstrap support for B9T288 as seed ortholog is 100%.
Bootstrap support for A3LQI3 as seed ortholog is 100%.

Group of orthologs #1620. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:96

B9T7Q5              	100.00%		A3LZI3              	100.00%
Bootstrap support for B9T7Q5 as seed ortholog is 99%.
Bootstrap support for A3LZI3 as seed ortholog is 100%.

Group of orthologs #1621. Best score 96 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:96

B9TMM6              	100.00%		A3GHX1              	100.00%
Bootstrap support for B9TMM6 as seed ortholog is 86%.
Bootstrap support for A3GHX1 as seed ortholog is 100%.

Group of orthologs #1622. Best score 95 bits
Score difference with first non-orthologous sequence - R.communis:37 S.stipitis:95

B9R7A8              	100.00%		A3LNM0              	100.00%
B9RAI4              	17.19%		
B9T1J9              	10.17%		
Bootstrap support for B9R7A8 as seed ortholog is 80%.
Bootstrap support for A3LNM0 as seed ortholog is 100%.

Group of orthologs #1623. Best score 95 bits
Score difference with first non-orthologous sequence - R.communis:95 S.stipitis:95

B9RRI5              	100.00%		A3LSZ3              	100.00%
B9R7R1              	10.83%		
Bootstrap support for B9RRI5 as seed ortholog is 100%.
Bootstrap support for A3LSZ3 as seed ortholog is 100%.

Group of orthologs #1624. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9SR56              	40.89%		A3LN02              	100.00%
B9SNS2              	100.00%		A3LU75              	100.00%
B9S192              	38.35%		A3LWY7              	39.11%
B9S1A0              	38.03%		A3GFQ3              	6.99%
B9S197              	37.88%		
B9T417              	34.07%		
B9SR52              	31.85%		
B9S1A1              	30.59%		
B9RT28              	29.48%		
B9T5W6              	25.52%		
B9S194              	25.04%		
B9REI6              	20.44%		
B9S888              	18.54%		
B9T600              	18.07%		
B9RXC5              	17.12%		
B9RJR8              	16.64%		
B9SEL5              	16.48%		
B9RMV2              	16.32%		
B9S9D6              	16.01%		
B9S2U4              	15.37%		
B9S9D4              	15.21%		
B9S195              	15.21%		
B9RJ55              	15.06%		
B9RYX6              	14.90%		
B9TDY5              	14.90%		
B9S0A9              	14.42%		
B9RJ53              	14.42%		
B9TAQ8              	14.26%		
B9R9Z7              	13.31%		
B9SIK8              	12.52%		
B9SIK9              	12.52%		
B9SIL0              	12.52%		
B9SIL1              	12.36%		
B9RZI7              	12.20%		
B9SKK0              	11.89%		
B9RKA0              	11.57%		
B9SJ20              	11.41%		
B9SNM5              	10.94%		
B9RP90              	10.94%		
B9SME4              	10.78%		
B9RZI6              	10.62%		
B9STI5              	10.46%		
B9T282              	10.30%		
B9RK13              	10.14%		
B9SWH0              	10.14%		
B9STI2              	9.67%		
B9R9J8              	9.19%		
B9SA24              	9.19%		
B9S2R1              	9.03%		
B9RPD0              	9.03%		
B9RXR9              	8.72%		
B9RY49              	8.72%		
B9T297              	8.56%		
B9STI0              	8.24%		
B9RZV7              	7.45%		
B9STI6              	7.29%		
B9RDH3              	7.13%		
B9SA26              	7.13%		
B9S116              	6.81%		
B9STI7              	6.81%		
B9RN97              	6.66%		
B9S6P0              	6.50%		
B9SXN3              	6.50%		
B9R992              	6.34%		
B9STI1              	6.18%		
B9T2A7              	6.02%		
Bootstrap support for B9SNS2 as seed ortholog is 100%.
Bootstrap support for A3LN02 as seed ortholog is 100%.
Bootstrap support for A3LU75 as seed ortholog is 100%.

Group of orthologs #1625. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9RH67              	100.00%		A3LVB9              	100.00%
B9SCV0              	94.21%		
B9RPT2              	90.08%		
Bootstrap support for B9RH67 as seed ortholog is 100%.
Bootstrap support for A3LVB9 as seed ortholog is 100%.

Group of orthologs #1626. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9RJ74              	100.00%		A3LSU6              	100.00%
B9SPS7              	35.43%		
Bootstrap support for B9RJ74 as seed ortholog is 100%.
Bootstrap support for A3LSU6 as seed ortholog is 100%.

Group of orthologs #1627. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9RZC1              	100.00%		A3GFM5              	100.00%
B9SGH8              	59.29%		
Bootstrap support for B9RZC1 as seed ortholog is 100%.
Bootstrap support for A3GFM5 as seed ortholog is 100%.

Group of orthologs #1628. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9SXN0              	100.00%		A3LXA6              	100.00%
                    	       		A3LXA7              	69.43%
Bootstrap support for B9SXN0 as seed ortholog is 100%.
Bootstrap support for A3LXA6 as seed ortholog is 100%.

Group of orthologs #1629. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9RGH8              	100.00%		A3LPD0              	100.00%
Bootstrap support for B9RGH8 as seed ortholog is 100%.
Bootstrap support for A3LPD0 as seed ortholog is 100%.

Group of orthologs #1630. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9RVD7              	100.00%		A3LQL0              	100.00%
Bootstrap support for B9RVD7 as seed ortholog is 100%.
Bootstrap support for A3LQL0 as seed ortholog is 100%.

Group of orthologs #1631. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9SBI9              	100.00%		A3GGG2              	100.00%
Bootstrap support for B9SBI9 as seed ortholog is 100%.
Bootstrap support for A3GGG2 as seed ortholog is 100%.

Group of orthologs #1632. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9S953              	100.00%		A3LVT7              	100.00%
Bootstrap support for B9S953 as seed ortholog is 100%.
Bootstrap support for A3LVT7 as seed ortholog is 100%.

Group of orthologs #1633. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:35 S.stipitis:94

B9T7T8              	100.00%		A3LR64              	100.00%
Bootstrap support for B9T7T8 as seed ortholog is 89%.
Bootstrap support for A3LR64 as seed ortholog is 100%.

Group of orthologs #1634. Best score 94 bits
Score difference with first non-orthologous sequence - R.communis:94 S.stipitis:94

B9T701              	100.00%		A3LZ13              	100.00%
Bootstrap support for B9T701 as seed ortholog is 100%.
Bootstrap support for A3LZ13 as seed ortholog is 100%.

Group of orthologs #1635. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:10 S.stipitis:23

B9RAB9              	100.00%		A3LXB1              	100.00%
B9RAC0              	34.73%		
B9SPX3              	23.64%		
B9RAB7              	23.45%		
Bootstrap support for B9RAB9 as seed ortholog is 64%.
Alternative seed ortholog is B9TE20 (10 bits away from this cluster)
Bootstrap support for A3LXB1 as seed ortholog is 79%.

Group of orthologs #1636. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:40 S.stipitis:20

B9RJ70              	100.00%		A3LQ17              	100.00%
B9SZK9              	100.00%		
B9S912              	30.31%		
B9SVI5              	27.76%		
Bootstrap support for B9RJ70 as seed ortholog is 93%.
Bootstrap support for B9SZK9 as seed ortholog is 93%.
Bootstrap support for A3LQ17 as seed ortholog is 74%.
Alternative seed ortholog is A3LQG0 (20 bits away from this cluster)

Group of orthologs #1637. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:93

B9SAX7              	100.00%		A3LSM5              	100.00%
B9SVC4              	53.39%		A3M034              	18.15%
Bootstrap support for B9SAX7 as seed ortholog is 100%.
Bootstrap support for A3LSM5 as seed ortholog is 100%.

Group of orthologs #1638. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:93

B9RBL9              	100.00%		A3GFG6              	100.00%
B9RFL2              	91.37%		
Bootstrap support for B9RBL9 as seed ortholog is 100%.
Bootstrap support for A3GFG6 as seed ortholog is 100%.

Group of orthologs #1639. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:93

B9RVK2              	100.00%		A3LZH6              	100.00%
B9SY17              	12.16%		
Bootstrap support for B9RVK2 as seed ortholog is 100%.
Bootstrap support for A3LZH6 as seed ortholog is 100%.

Group of orthologs #1640. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:93

B9SWH8              	100.00%		A3GF04              	100.00%
B9RRH9              	6.36%		
Bootstrap support for B9SWH8 as seed ortholog is 100%.
Bootstrap support for A3GF04 as seed ortholog is 100%.

Group of orthologs #1641. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:93

B9RRY5              	100.00%		A3LT61              	100.00%
Bootstrap support for B9RRY5 as seed ortholog is 100%.
Bootstrap support for A3LT61 as seed ortholog is 100%.

Group of orthologs #1642. Best score 93 bits
Score difference with first non-orthologous sequence - R.communis:93 S.stipitis:18

B9T8K4              	100.00%		A3M0J3              	100.00%
Bootstrap support for B9T8K4 as seed ortholog is 100%.
Bootstrap support for A3M0J3 as seed ortholog is 78%.

Group of orthologs #1643. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9RI08              	100.00%		A3LYP9              	100.00%
B9SY81              	13.95%		
B9RBQ5              	13.18%		
B9RCH0              	12.56%		
B9RRP8              	11.63%		
B9SFE2              	10.08%		
B9SJ36              	6.36%		
B9R9C2              	5.43%		
Bootstrap support for B9RI08 as seed ortholog is 100%.
Bootstrap support for A3LYP9 as seed ortholog is 100%.

Group of orthologs #1644. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9S071              	100.00%		A3M0N7              	100.00%
B9RAV5              	100.00%		A3LSQ8              	100.00%
B9RPX3              	40.88%		
B9RDV8              	22.87%		
B9RDV7              	22.20%		
B9S074              	19.02%		
Bootstrap support for B9S071 as seed ortholog is 100%.
Bootstrap support for B9RAV5 as seed ortholog is 100%.
Bootstrap support for A3M0N7 as seed ortholog is 100%.
Bootstrap support for A3LSQ8 as seed ortholog is 100%.

Group of orthologs #1645. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9RD79              	100.00%		A3LTB0              	100.00%
B9SSG0              	52.13%		
B9RD68              	50.80%		
B9T0M0              	24.73%		
B9RSZ2              	22.87%		
Bootstrap support for B9RD79 as seed ortholog is 100%.
Bootstrap support for A3LTB0 as seed ortholog is 100%.

Group of orthologs #1646. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9RQX1              	100.00%		A3LRM4              	100.00%
B9TB51              	40.08%		
B9RRB4              	27.52%		
Bootstrap support for B9RQX1 as seed ortholog is 100%.
Bootstrap support for A3LRM4 as seed ortholog is 100%.

Group of orthologs #1647. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:35

B9R805              	100.00%		A3LYJ5              	100.00%
B9S688              	87.55%		
Bootstrap support for B9R805 as seed ortholog is 92%.
Bootstrap support for A3LYJ5 as seed ortholog is 88%.

Group of orthologs #1648. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:92

B9SU01              	100.00%		A3LNK8              	100.00%
B9S510              	73.39%		
Bootstrap support for B9SU01 as seed ortholog is 98%.
Bootstrap support for A3LNK8 as seed ortholog is 100%.

Group of orthologs #1649. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9TP52              	100.00%		A3LQR0              	100.00%
                    	       		A3LSU3              	100.00%
Bootstrap support for B9TP52 as seed ortholog is 100%.
Bootstrap support for A3LQR0 as seed ortholog is 100%.
Bootstrap support for A3LSU3 as seed ortholog is 100%.

Group of orthologs #1650. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9R8N0              	100.00%		A3LR47              	100.00%
Bootstrap support for B9R8N0 as seed ortholog is 100%.
Bootstrap support for A3LR47 as seed ortholog is 100%.

Group of orthologs #1651. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:47 S.stipitis:92

B9RM93              	100.00%		A3LQ56              	100.00%
Bootstrap support for B9RM93 as seed ortholog is 94%.
Bootstrap support for A3LQ56 as seed ortholog is 100%.

Group of orthologs #1652. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9RXN8              	100.00%		A3GFA6              	100.00%
Bootstrap support for B9RXN8 as seed ortholog is 100%.
Bootstrap support for A3GFA6 as seed ortholog is 100%.

Group of orthologs #1653. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9RLP8              	100.00%		A3M0P1              	100.00%
Bootstrap support for B9RLP8 as seed ortholog is 100%.
Bootstrap support for A3M0P1 as seed ortholog is 100%.

Group of orthologs #1654. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9SQ82              	100.00%		A3LS61              	100.00%
Bootstrap support for B9SQ82 as seed ortholog is 100%.
Bootstrap support for A3LS61 as seed ortholog is 100%.

Group of orthologs #1655. Best score 92 bits
Score difference with first non-orthologous sequence - R.communis:92 S.stipitis:92

B9SWJ3              	100.00%		A3LPE0              	100.00%
Bootstrap support for B9SWJ3 as seed ortholog is 100%.
Bootstrap support for A3LPE0 as seed ortholog is 100%.

Group of orthologs #1656. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:91

B9RBX2              	100.00%		A3LY46              	100.00%
B9RBX6              	64.13%		A3LTQ3              	35.66%
B9RBY1              	64.13%		A3GH40              	14.59%
B9RBX7              	63.62%		
B9RBX4              	63.26%		
B9RBY3              	61.75%		
B9RBY4              	58.02%		
B9RBY5              	52.12%		
B9SKL8              	36.23%		
B9T4J8              	35.30%		
B9RDI3              	34.51%		
B9RR97              	33.93%		
B9R726              	33.50%		
B9SX95              	31.56%		
B9T6I8              	31.34%		
B9R9K9              	30.63%		
B9SF18              	30.34%		
B9SGA4              	29.19%		
B9R7A3              	28.76%		
B9SGV4              	28.68%		
B9SG98              	28.47%		
B9S8H8              	28.32%		
B9R7A2              	28.25%		
B9RYX0              	27.61%		
B9RYG6              	27.39%		
B9RC06              	26.74%		
B9RUD5              	26.53%		
B9SX94              	26.38%		
B9SE30              	26.38%		
B9SC87              	26.31%		
B9SE31              	26.31%		
B9SRB6              	26.24%		
B9SAV8              	26.17%		
B9R7A1              	26.17%		
B9RDI2              	24.95%		
B9SHW1              	24.73%		
B9RYW8              	24.73%		
B9SC83              	24.51%		
B9RHC5              	24.44%		
B9T5M7              	24.16%		
B9SE32              	23.87%		
B9SBN2              	22.65%		
B9SCR3              	22.57%		
B9T6Y9              	20.99%		
B9R8D5              	18.69%		
B9SNY7              	15.67%		
B9SEE1              	14.74%		
B9SWF1              	14.74%		
B9RXF5              	13.59%		
B9SE33              	8.70%		
Bootstrap support for B9RBX2 as seed ortholog is 100%.
Bootstrap support for A3LY46 as seed ortholog is 100%.

Group of orthologs #1657. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:5 S.stipitis:91

B9SVQ5              	100.00%		A3LPN1              	100.00%
B9SVQ8              	79.03%		A3LSP6              	85.44%
B9SVQ6              	71.58%		A3LZW9              	23.32%
B9SVQ7              	52.10%		
B9RN17              	21.52%		
B9T2H8              	18.67%		
B9T0L3              	17.19%		
B9S5L0              	16.51%		
Bootstrap support for B9SVQ5 as seed ortholog is 46%.
Alternative seed ortholog is B9SC68 (5 bits away from this cluster)
Bootstrap support for A3LPN1 as seed ortholog is 100%.

Group of orthologs #1658. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:45

B9SIA7              	61.98%		A3GHM2              	100.00%
B9SUS4              	100.00%		A3LU22              	100.00%
B9SDJ9              	38.42%		
B9S616              	36.44%		
B9SHK3              	36.44%		
B9RH57              	19.60%		
B9S6E5              	14.85%		
Bootstrap support for B9SUS4 as seed ortholog is 100%.
Bootstrap support for A3GHM2 as seed ortholog is 83%.
Bootstrap support for A3LU22 as seed ortholog is 93%.

Group of orthologs #1659. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:91

B9RFA5              	100.00%		A3GFI2              	100.00%
B9RT45              	77.78%		
Bootstrap support for B9RFA5 as seed ortholog is 100%.
Bootstrap support for A3GFI2 as seed ortholog is 100%.

Group of orthologs #1660. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:91

B9SF05              	100.00%		A3LZ08              	100.00%
B9S6D7              	15.92%		
Bootstrap support for B9SF05 as seed ortholog is 100%.
Bootstrap support for A3LZ08 as seed ortholog is 100%.

Group of orthologs #1661. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:46 S.stipitis:91

B9SV19              	100.00%		A3LUS1              	100.00%
B9SS59              	68.05%		
Bootstrap support for B9SV19 as seed ortholog is 95%.
Bootstrap support for A3LUS1 as seed ortholog is 100%.

Group of orthologs #1662. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:91

B9SP74              	100.00%		A3GI12              	100.00%
Bootstrap support for B9SP74 as seed ortholog is 100%.
Bootstrap support for A3GI12 as seed ortholog is 100%.

Group of orthologs #1663. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:91

B9SNC6              	100.00%		A3LQW1              	100.00%
Bootstrap support for B9SNC6 as seed ortholog is 100%.
Bootstrap support for A3LQW1 as seed ortholog is 100%.

Group of orthologs #1664. Best score 91 bits
Score difference with first non-orthologous sequence - R.communis:91 S.stipitis:91

B9SXP0              	100.00%		A3LUV2              	100.00%
Bootstrap support for B9SXP0 as seed ortholog is 100%.
Bootstrap support for A3LUV2 as seed ortholog is 100%.

Group of orthologs #1665. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9RXK1              	100.00%		A3GFD6              	100.00%
B9RKL0              	70.48%		
B9RS22              	64.66%		
Bootstrap support for B9RXK1 as seed ortholog is 100%.
Bootstrap support for A3GFD6 as seed ortholog is 100%.

Group of orthologs #1666. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:17 S.stipitis:90

B9RS40              	100.00%		A3LXH8              	100.00%
B9S2Q1              	22.56%		
B9S215              	5.16%		
Bootstrap support for B9RS40 as seed ortholog is 62%.
Alternative seed ortholog is B9T1B0 (17 bits away from this cluster)
Bootstrap support for A3LXH8 as seed ortholog is 100%.

Group of orthologs #1667. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9TF72              	100.00%		A3LZU9              	100.00%
                    	       		A3LQR8              	31.73%
                    	       		A3LSD2              	29.62%
Bootstrap support for B9TF72 as seed ortholog is 100%.
Bootstrap support for A3LZU9 as seed ortholog is 100%.

Group of orthologs #1668. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9S469              	100.00%		A3LQP4              	100.00%
                    	       		A3LWA3              	100.00%
Bootstrap support for B9S469 as seed ortholog is 100%.
Bootstrap support for A3LQP4 as seed ortholog is 100%.
Bootstrap support for A3LWA3 as seed ortholog is 100%.

Group of orthologs #1669. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9T8A0              	100.00%		A3LZW2              	100.00%
B9RR99              	64.37%		
Bootstrap support for B9T8A0 as seed ortholog is 100%.
Bootstrap support for A3LZW2 as seed ortholog is 100%.

Group of orthologs #1670. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:90

B9RTW7              	100.00%		A3LYY7              	100.00%
Bootstrap support for B9RTW7 as seed ortholog is 83%.
Bootstrap support for A3LYY7 as seed ortholog is 100%.

Group of orthologs #1671. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9S5Q3              	100.00%		A3LVK8              	100.00%
Bootstrap support for B9S5Q3 as seed ortholog is 100%.
Bootstrap support for A3LVK8 as seed ortholog is 100%.

Group of orthologs #1672. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9SMM8              	100.00%		A3LXJ8              	100.00%
Bootstrap support for B9SMM8 as seed ortholog is 100%.
Bootstrap support for A3LXJ8 as seed ortholog is 100%.

Group of orthologs #1673. Best score 90 bits
Score difference with first non-orthologous sequence - R.communis:90 S.stipitis:90

B9T391              	100.00%		A3GHC5              	100.00%
Bootstrap support for B9T391 as seed ortholog is 100%.
Bootstrap support for A3GHC5 as seed ortholog is 100%.

Group of orthologs #1674. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:23 S.stipitis:89

B9RB11              	100.00%		A3LUU7              	100.00%
B9REF2              	100.00%		A3LQJ4              	100.00%
B9RB94              	63.84%		
B9S624              	48.48%		
B9SAI9              	22.95%		
B9RXP8              	22.67%		
B9SDB8              	22.53%		
B9SDB7              	20.86%		
Bootstrap support for B9RB11 as seed ortholog is 66%.
Alternative seed ortholog is B9RRG8 (23 bits away from this cluster)
Bootstrap support for B9REF2 as seed ortholog is 61%.
Alternative seed ortholog is B9RRG8 (23 bits away from this cluster)
Bootstrap support for A3LUU7 as seed ortholog is 100%.
Bootstrap support for A3LQJ4 as seed ortholog is 100%.

Group of orthologs #1675. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9S3X5              	100.00%		A3LRU4              	100.00%
B9REX9              	53.59%		
B9RSY7              	41.85%		
B9REY0              	40.11%		
B9REY1              	23.59%		
Bootstrap support for B9S3X5 as seed ortholog is 100%.
Bootstrap support for A3LRU4 as seed ortholog is 100%.

Group of orthologs #1676. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:10 S.stipitis:89

B9RJE0              	100.00%		A3LZQ4              	100.00%
B9SD41              	100.00%		
B9T7N8              	71.66%		
B9S7T6              	67.84%		
Bootstrap support for B9RJE0 as seed ortholog is 46%.
Alternative seed ortholog is B9T9V4 (10 bits away from this cluster)
Bootstrap support for B9SD41 as seed ortholog is 49%.
Alternative seed ortholog is B9T9V4 (10 bits away from this cluster)
Bootstrap support for A3LZQ4 as seed ortholog is 100%.

Group of orthologs #1677. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:18

B9S0Q9              	100.00%		A3LNL9              	100.00%
B9SMS9              	55.76%		
Bootstrap support for B9S0Q9 as seed ortholog is 85%.
Bootstrap support for A3LNL9 as seed ortholog is 67%.
Alternative seed ortholog is A3LNP9 (18 bits away from this cluster)

Group of orthologs #1678. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9S6B9              	100.00%		A3LU86              	100.00%
B9RZ19              	85.29%		
Bootstrap support for B9S6B9 as seed ortholog is 100%.
Bootstrap support for A3LU86 as seed ortholog is 100%.

Group of orthologs #1679. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9SV21              	100.00%		A3GHT8              	100.00%
B9SS61              	90.75%		
Bootstrap support for B9SV21 as seed ortholog is 100%.
Bootstrap support for A3GHT8 as seed ortholog is 100%.

Group of orthologs #1680. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

A1A442              	100.00%		A3LNX5              	100.00%
Bootstrap support for A1A442 as seed ortholog is 100%.
Bootstrap support for A3LNX5 as seed ortholog is 100%.

Group of orthologs #1681. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9R9A5              	100.00%		A3LQX9              	100.00%
Bootstrap support for B9R9A5 as seed ortholog is 100%.
Bootstrap support for A3LQX9 as seed ortholog is 100%.

Group of orthologs #1682. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9RQI5              	100.00%		A3GG45              	100.00%
Bootstrap support for B9RQI5 as seed ortholog is 100%.
Bootstrap support for A3GG45 as seed ortholog is 100%.

Group of orthologs #1683. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:22 S.stipitis:89

B9S6L1              	100.00%		A3GFK1              	100.00%
Bootstrap support for B9S6L1 as seed ortholog is 70%.
Alternative seed ortholog is B9RU08 (22 bits away from this cluster)
Bootstrap support for A3GFK1 as seed ortholog is 100%.

Group of orthologs #1684. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9SQ81              	100.00%		A3LN71              	100.00%
Bootstrap support for B9SQ81 as seed ortholog is 100%.
Bootstrap support for A3LN71 as seed ortholog is 100%.

Group of orthologs #1685. Best score 89 bits
Score difference with first non-orthologous sequence - R.communis:89 S.stipitis:89

B9TG03              	100.00%		A3LVT2              	100.00%
Bootstrap support for B9TG03 as seed ortholog is 100%.
Bootstrap support for A3LVT2 as seed ortholog is 100%.

Group of orthologs #1686. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9RXK2              	100.00%		A3LZW3              	100.00%
B9SUJ5              	51.11%		
B9SN95              	45.84%		
B9T1Y5              	45.29%		
B9TJR3              	11.36%		
Bootstrap support for B9RXK2 as seed ortholog is 100%.
Bootstrap support for A3LZW3 as seed ortholog is 100%.

Group of orthologs #1687. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:15 S.stipitis:88

B9RUL3              	100.00%		A3GG43              	100.00%
B9S2D9              	17.32%		A3LUN7              	24.49%
Bootstrap support for B9RUL3 as seed ortholog is 81%.
Bootstrap support for A3GG43 as seed ortholog is 100%.

Group of orthologs #1688. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:9 S.stipitis:88

B9S7Y1              	100.00%		A3LZT4              	100.00%
B9SU32              	67.31%		
B9S994              	14.21%		
Bootstrap support for B9S7Y1 as seed ortholog is 95%.
Bootstrap support for A3LZT4 as seed ortholog is 100%.

Group of orthologs #1689. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9RWM4              	100.00%		A3LU39              	100.00%
B9S527              	57.42%		
Bootstrap support for B9RWM4 as seed ortholog is 100%.
Bootstrap support for A3LU39 as seed ortholog is 100%.

Group of orthologs #1690. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9RC26              	100.00%		A3LP95              	100.00%
Bootstrap support for B9RC26 as seed ortholog is 100%.
Bootstrap support for A3LP95 as seed ortholog is 100%.

Group of orthologs #1691. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:42

B9RI76              	100.00%		A3LTG7              	100.00%
Bootstrap support for B9RI76 as seed ortholog is 100%.
Bootstrap support for A3LTG7 as seed ortholog is 86%.

Group of orthologs #1692. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9S6B3              	100.00%		A3GHQ1              	100.00%
Bootstrap support for B9S6B3 as seed ortholog is 100%.
Bootstrap support for A3GHQ1 as seed ortholog is 100%.

Group of orthologs #1693. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9RXD3              	100.00%		A3LYW4              	100.00%
Bootstrap support for B9RXD3 as seed ortholog is 100%.
Bootstrap support for A3LYW4 as seed ortholog is 100%.

Group of orthologs #1694. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9S9Y0              	100.00%		A3GHW6              	100.00%
Bootstrap support for B9S9Y0 as seed ortholog is 100%.
Bootstrap support for A3GHW6 as seed ortholog is 100%.

Group of orthologs #1695. Best score 88 bits
Score difference with first non-orthologous sequence - R.communis:88 S.stipitis:88

B9S167              	100.00%		A3LXT7              	100.00%
Bootstrap support for B9S167 as seed ortholog is 100%.
Bootstrap support for A3LXT7 as seed ortholog is 100%.

Group of orthologs #1696. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:87 S.stipitis:87

B9RN98              	100.00%		A3GH16              	100.00%
Bootstrap support for B9RN98 as seed ortholog is 100%.
Bootstrap support for A3GH16 as seed ortholog is 100%.

Group of orthologs #1697. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:87 S.stipitis:87

B9RGY2              	100.00%		A3LSW2              	100.00%
Bootstrap support for B9RGY2 as seed ortholog is 100%.
Bootstrap support for A3LSW2 as seed ortholog is 100%.

Group of orthologs #1698. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:87 S.stipitis:87

B9RMK3              	100.00%		A3LT80              	100.00%
Bootstrap support for B9RMK3 as seed ortholog is 100%.
Bootstrap support for A3LT80 as seed ortholog is 100%.

Group of orthologs #1699. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:87 S.stipitis:87

B9T7B5              	100.00%		A3GHL9              	100.00%
Bootstrap support for B9T7B5 as seed ortholog is 100%.
Bootstrap support for A3GHL9 as seed ortholog is 100%.

Group of orthologs #1700. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:27 S.stipitis:87

B9T078              	100.00%		A3LY40              	100.00%
Bootstrap support for B9T078 as seed ortholog is 61%.
Alternative seed ortholog is B9STA9 (27 bits away from this cluster)
Bootstrap support for A3LY40 as seed ortholog is 100%.

Group of orthologs #1701. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:87 S.stipitis:21

B9TAM4              	100.00%		A3LZM0              	100.00%
Bootstrap support for B9TAM4 as seed ortholog is 100%.
Bootstrap support for A3LZM0 as seed ortholog is 77%.

Group of orthologs #1702. Best score 87 bits
Score difference with first non-orthologous sequence - R.communis:87 S.stipitis:87

B9TJ70              	100.00%		A3LY76              	100.00%
Bootstrap support for B9TJ70 as seed ortholog is 100%.
Bootstrap support for A3LY76 as seed ortholog is 100%.

Group of orthologs #1703. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9SNT1              	100.00%		A3LY01              	100.00%
B9S232              	24.81%		
B9S4N6              	20.52%		
B9S8F1              	18.90%		
B9SIR6              	16.86%		
B9S9Y4              	16.54%		
B9SRG8              	15.04%		
B9RK82              	13.86%		
B9RKR4              	10.42%		
Bootstrap support for B9SNT1 as seed ortholog is 100%.
Bootstrap support for A3LY01 as seed ortholog is 100%.

Group of orthologs #1704. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9TBA0              	100.00%		A3LUX6              	100.00%
                    	       		A3LSB6              	46.97%
                    	       		A3LQJ9              	37.18%
Bootstrap support for B9TBA0 as seed ortholog is 100%.
Bootstrap support for A3LUX6 as seed ortholog is 100%.

Group of orthologs #1705. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9R983              	100.00%		A3GFL9              	100.00%
B9SG03              	21.52%		
Bootstrap support for B9R983 as seed ortholog is 100%.
Bootstrap support for A3GFL9 as seed ortholog is 100%.

Group of orthologs #1706. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:36

B9RDR2              	100.00%		A3LT32              	100.00%
                    	       		A3LT31              	13.74%
Bootstrap support for B9RDR2 as seed ortholog is 100%.
Bootstrap support for A3LT32 as seed ortholog is 85%.

Group of orthologs #1707. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9RQN0              	100.00%		A3LV92              	100.00%
B9RZI0              	21.97%		
Bootstrap support for B9RQN0 as seed ortholog is 100%.
Bootstrap support for A3LV92 as seed ortholog is 100%.

Group of orthologs #1708. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9SB75              	100.00%		A3GHR2              	100.00%
B9SNX0              	96.58%		
Bootstrap support for B9SB75 as seed ortholog is 100%.
Bootstrap support for A3GHR2 as seed ortholog is 100%.

Group of orthologs #1709. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9SS20              	100.00%		A3LRK7              	100.00%
B9SQE4              	19.32%		
Bootstrap support for B9SS20 as seed ortholog is 100%.
Bootstrap support for A3LRK7 as seed ortholog is 100%.

Group of orthologs #1710. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9RQS5              	100.00%		A3LSV0              	100.00%
Bootstrap support for B9RQS5 as seed ortholog is 100%.
Bootstrap support for A3LSV0 as seed ortholog is 100%.

Group of orthologs #1711. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9RPQ7              	100.00%		A3LWV4              	100.00%
Bootstrap support for B9RPQ7 as seed ortholog is 100%.
Bootstrap support for A3LWV4 as seed ortholog is 100%.

Group of orthologs #1712. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9RXK0              	100.00%		A3LZM8              	100.00%
Bootstrap support for B9RXK0 as seed ortholog is 100%.
Bootstrap support for A3LZM8 as seed ortholog is 100%.

Group of orthologs #1713. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9S8Z5              	100.00%		A3LRN5              	100.00%
Bootstrap support for B9S8Z5 as seed ortholog is 100%.
Bootstrap support for A3LRN5 as seed ortholog is 100%.

Group of orthologs #1714. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9SGF0              	100.00%		A3LPW2              	100.00%
Bootstrap support for B9SGF0 as seed ortholog is 100%.
Bootstrap support for A3LPW2 as seed ortholog is 100%.

Group of orthologs #1715. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:86

B9SGQ3              	100.00%		A3LR73              	100.00%
Bootstrap support for B9SGQ3 as seed ortholog is 93%.
Bootstrap support for A3LR73 as seed ortholog is 100%.

Group of orthologs #1716. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9T127              	100.00%		A3GHB7              	100.00%
Bootstrap support for B9T127 as seed ortholog is 100%.
Bootstrap support for A3GHB7 as seed ortholog is 100%.

Group of orthologs #1717. Best score 86 bits
Score difference with first non-orthologous sequence - R.communis:86 S.stipitis:86

B9T8F4              	100.00%		A3LSI8              	100.00%
Bootstrap support for B9T8F4 as seed ortholog is 100%.
Bootstrap support for A3LSI8 as seed ortholog is 100%.

Group of orthologs #1718. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:25 S.stipitis:29

B9REC0              	100.00%		A3LSC2              	100.00%
B9RWV1              	100.00%		
B9T514              	36.65%		
Bootstrap support for B9REC0 as seed ortholog is 93%.
Bootstrap support for B9RWV1 as seed ortholog is 85%.
Bootstrap support for A3LSC2 as seed ortholog is 96%.

Group of orthologs #1719. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:85

B9SSM4              	100.00%		A3GIE2              	100.00%
B9SY93              	29.76%		
B9RH35              	21.41%		
Bootstrap support for B9SSM4 as seed ortholog is 100%.
Bootstrap support for A3GIE2 as seed ortholog is 100%.

Group of orthologs #1720. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:85

B9S1Y6              	100.00%		A3LUB2              	100.00%
B9S1Y5              	75.63%		
Bootstrap support for B9S1Y6 as seed ortholog is 100%.
Bootstrap support for A3LUB2 as seed ortholog is 100%.

Group of orthologs #1721. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:1 S.stipitis:85

B9S767              	100.00%		A3LRG0              	100.00%
B9SHQ3              	17.30%		
Bootstrap support for B9S767 as seed ortholog is 75%.
Bootstrap support for A3LRG0 as seed ortholog is 100%.

Group of orthologs #1722. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:85

B9RKC6              	100.00%		A3GG32              	100.00%
Bootstrap support for B9RKC6 as seed ortholog is 100%.
Bootstrap support for A3GG32 as seed ortholog is 100%.

Group of orthologs #1723. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:23

B9RF84              	100.00%		A3LRD0              	100.00%
Bootstrap support for B9RF84 as seed ortholog is 100%.
Bootstrap support for A3LRD0 as seed ortholog is 69%.
Alternative seed ortholog is A3LPX1 (23 bits away from this cluster)

Group of orthologs #1724. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:85

B9RNK4              	100.00%		A3LT54              	100.00%
Bootstrap support for B9RNK4 as seed ortholog is 100%.
Bootstrap support for A3LT54 as seed ortholog is 100%.

Group of orthologs #1725. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:85 S.stipitis:85

B9RRL9              	100.00%		A3LZJ7              	100.00%
Bootstrap support for B9RRL9 as seed ortholog is 100%.
Bootstrap support for A3LZJ7 as seed ortholog is 100%.

Group of orthologs #1726. Best score 85 bits
Score difference with first non-orthologous sequence - R.communis:15 S.stipitis:85

B9T303              	100.00%		A3LXP1              	100.00%
Bootstrap support for B9T303 as seed ortholog is 62%.
Alternative seed ortholog is B9RD21 (15 bits away from this cluster)
Bootstrap support for A3LXP1 as seed ortholog is 100%.

Group of orthologs #1727. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:84

B9ST21              	100.00%		A3LQR6              	100.00%
B9RSL2              	53.93%		
B9SNK0              	16.98%		
B9SDP1              	16.67%		
B9SHS6              	15.72%		
B9R9J9              	15.09%		
B9R7F7              	13.52%		
B9SJR1              	13.05%		
B9R9K0              	12.74%		
B9RY25              	11.64%		
B9RP54              	11.32%		
B9RY26              	10.85%		
B9SQS4              	10.38%		
B9RDG5              	10.38%		
B9RDG3              	9.91%		
B9SBX1              	9.91%		
B9R7F8              	9.43%		
B9RY22              	9.12%		
B9SBT2              	8.81%		
B9RWA6              	8.49%		
B9RY23              	8.49%		
B9SFJ8              	8.49%		
B9REZ1              	8.33%		
B9RTY7              	8.18%		
B9T399              	7.86%		
B9RY24              	7.55%		
B9RDG4              	6.92%		
B9RYG8              	6.60%		
Bootstrap support for B9ST21 as seed ortholog is 87%.
Bootstrap support for A3LQR6 as seed ortholog is 100%.

Group of orthologs #1728. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9T6E2              	100.00%		A3LYP8              	100.00%
B9S1W3              	52.99%		
B9T0V4              	47.64%		
Bootstrap support for B9T6E2 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #1729. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9RJK0              	100.00%		A3LT40              	100.00%
                    	       		A3GFK9              	25.76%
Bootstrap support for B9RJK0 as seed ortholog is 100%.
Bootstrap support for A3LT40 as seed ortholog is 100%.

Group of orthologs #1730. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9RWQ1              	100.00%		A3LN81              	100.00%
B9SHH0              	11.27%		
Bootstrap support for B9RWQ1 as seed ortholog is 100%.
Bootstrap support for A3LN81 as seed ortholog is 100%.

Group of orthologs #1731. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9T6F7              	100.00%		A3LX75              	100.00%
B9RHN5              	7.36%		
Bootstrap support for B9T6F7 as seed ortholog is 100%.
Bootstrap support for A3LX75 as seed ortholog is 100%.

Group of orthologs #1732. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9R720              	100.00%		A3LSG4              	100.00%
Bootstrap support for B9R720 as seed ortholog is 100%.
Bootstrap support for A3LSG4 as seed ortholog is 100%.

Group of orthologs #1733. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9RRH8              	100.00%		A3GFD2              	100.00%
Bootstrap support for B9RRH8 as seed ortholog is 100%.
Bootstrap support for A3GFD2 as seed ortholog is 100%.

Group of orthologs #1734. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9SK66              	100.00%		A3LQ09              	100.00%
Bootstrap support for B9SK66 as seed ortholog is 100%.
Bootstrap support for A3LQ09 as seed ortholog is 100%.

Group of orthologs #1735. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9SW27              	100.00%		A3LR30              	100.00%
Bootstrap support for B9SW27 as seed ortholog is 100%.
Bootstrap support for A3LR30 as seed ortholog is 100%.

Group of orthologs #1736. Best score 84 bits
Score difference with first non-orthologous sequence - R.communis:84 S.stipitis:84

B9T4T0              	100.00%		A3LR88              	100.00%
Bootstrap support for B9T4T0 as seed ortholog is 100%.
Bootstrap support for A3LR88 as seed ortholog is 100%.

Group of orthologs #1737. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9RXD0              	100.00%		A3LZN0              	100.00%
B9RWD8              	67.03%		
Bootstrap support for B9RXD0 as seed ortholog is 100%.
Bootstrap support for A3LZN0 as seed ortholog is 100%.

Group of orthologs #1738. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:34 S.stipitis:83

B9SXM7              	100.00%		A3LVF3              	100.00%
B9RUD7              	35.00%		
Bootstrap support for B9SXM7 as seed ortholog is 96%.
Bootstrap support for A3LVF3 as seed ortholog is 100%.

Group of orthologs #1739. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9TE90              	100.00%		A3LYV7              	100.00%
B9RZR7              	6.51%		
Bootstrap support for B9TE90 as seed ortholog is 100%.
Bootstrap support for A3LYV7 as seed ortholog is 100%.

Group of orthologs #1740. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9RDI8              	100.00%		A3GFM6              	100.00%
Bootstrap support for B9RDI8 as seed ortholog is 100%.
Bootstrap support for A3GFM6 as seed ortholog is 100%.

Group of orthologs #1741. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9RQ69              	100.00%		A3LWT2              	100.00%
Bootstrap support for B9RQ69 as seed ortholog is 100%.
Bootstrap support for A3LWT2 as seed ortholog is 100%.

Group of orthologs #1742. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9SAP3              	100.00%		A3M0H5              	100.00%
Bootstrap support for B9SAP3 as seed ortholog is 100%.
Bootstrap support for A3M0H5 as seed ortholog is 100%.

Group of orthologs #1743. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9SPY1              	100.00%		A3LW39              	100.00%
Bootstrap support for B9SPY1 as seed ortholog is 100%.
Bootstrap support for A3LW39 as seed ortholog is 100%.

Group of orthologs #1744. Best score 83 bits
Score difference with first non-orthologous sequence - R.communis:83 S.stipitis:83

B9T018              	100.00%		A3LZW1              	100.00%
Bootstrap support for B9T018 as seed ortholog is 100%.
Bootstrap support for A3LZW1 as seed ortholog is 100%.

Group of orthologs #1745. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9RY13              	100.00%		A3GGK1              	100.00%
B9S318              	66.93%		A3LNQ4              	27.29%
B9S319              	66.93%		
B9SJQ9              	65.73%		
B9SJR0              	65.73%		
B9S199              	62.53%		
B9SJQ5              	61.92%		
B9S198              	54.31%		
B9T354              	52.71%		
B9T552              	47.70%		
B9SJQ4              	41.48%		
B9RKL5              	40.28%		
B9SA56              	35.07%		
B9SX21              	34.27%		
B9TDE6              	26.65%		
B9TB80              	18.44%		
B9SJF6              	17.43%		
B9TEM9              	13.23%		
Bootstrap support for B9RY13 as seed ortholog is 100%.
Bootstrap support for A3GGK1 as seed ortholog is 100%.

Group of orthologs #1746. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:36

B9SKU5              	100.00%		A3GHU4              	100.00%
B9SI71              	100.00%		A3LVM7              	100.00%
B9SI72              	100.00%		A3LWY1              	100.00%
B9SZ12              	100.00%		A3LQF6              	100.00%
B9SKU6              	56.78%		A3GF84              	62.50%
B9SAY1              	56.51%		A3LNX9              	58.50%
B9RY28              	50.56%		A3LUT5              	40.43%
B9RPW6              	43.88%		A3LPC8              	25.28%
B9SQ75              	26.21%		A3GFQ1              	24.92%
B9RD13              	23.14%		A3LRB6              	18.55%
Bootstrap support for B9SKU5 as seed ortholog is 100%.
Bootstrap support for B9SI71 as seed ortholog is 100%.
Bootstrap support for B9SI72 as seed ortholog is 100%.
Bootstrap support for B9SZ12 as seed ortholog is 100%.
Bootstrap support for A3GHU4 as seed ortholog is 77%.
Bootstrap support for A3LVM7 as seed ortholog is 56%.
Alternative seed ortholog is A3GFU3 (36 bits away from this cluster)
Bootstrap support for A3LWY1 as seed ortholog is 72%.
Alternative seed ortholog is A3GFU3 (36 bits away from this cluster)
Bootstrap support for A3LQF6 as seed ortholog is 64%.
Alternative seed ortholog is A3GFU3 (36 bits away from this cluster)

Group of orthologs #1747. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9S2B6              	100.00%		A3LXF4              	100.00%
B9RUM5              	73.59%		
B9SH01              	46.10%		
B9R705              	39.18%		
B9R946              	19.48%		
Bootstrap support for B9S2B6 as seed ortholog is 100%.
Bootstrap support for A3LXF4 as seed ortholog is 100%.

Group of orthologs #1748. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:16

B9SKH3              	100.00%		A3LUI7              	100.00%
B9RM47              	20.27%		
Bootstrap support for B9SKH3 as seed ortholog is 88%.
Bootstrap support for A3LUI7 as seed ortholog is 75%.

Group of orthologs #1749. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9SJ07              	100.00%		A3LXH3              	100.00%
B9SUW2              	11.54%		
Bootstrap support for B9SJ07 as seed ortholog is 100%.
Bootstrap support for A3LXH3 as seed ortholog is 100%.

Group of orthologs #1750. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9RZF3              	100.00%		A3LYE0              	100.00%
Bootstrap support for B9RZF3 as seed ortholog is 100%.
Bootstrap support for A3LYE0 as seed ortholog is 100%.

Group of orthologs #1751. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9SC04              	100.00%		A3LQI9              	100.00%
Bootstrap support for B9SC04 as seed ortholog is 100%.
Bootstrap support for A3LQI9 as seed ortholog is 100%.

Group of orthologs #1752. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9SBZ2              	100.00%		A3LW94              	100.00%
Bootstrap support for B9SBZ2 as seed ortholog is 100%.
Bootstrap support for A3LW94 as seed ortholog is 100%.

Group of orthologs #1753. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9SRK3              	100.00%		A3LXP5              	100.00%
Bootstrap support for B9SRK3 as seed ortholog is 100%.
Bootstrap support for A3LXP5 as seed ortholog is 100%.

Group of orthologs #1754. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9T0Y7              	100.00%		A3LNI0              	100.00%
Bootstrap support for B9T0Y7 as seed ortholog is 100%.
Bootstrap support for A3LNI0 as seed ortholog is 100%.

Group of orthologs #1755. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9SSF0              	100.00%		A3LZ32              	100.00%
Bootstrap support for B9SSF0 as seed ortholog is 100%.
Bootstrap support for A3LZ32 as seed ortholog is 100%.

Group of orthologs #1756. Best score 82 bits
Score difference with first non-orthologous sequence - R.communis:82 S.stipitis:82

B9T3N2              	100.00%		A3LY65              	100.00%
Bootstrap support for B9T3N2 as seed ortholog is 100%.
Bootstrap support for A3LY65 as seed ortholog is 100%.

Group of orthologs #1757. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:2 S.stipitis:12

B9SAR0              	100.00%		A3GGU4              	100.00%
B9RFC2              	58.56%		
B9S1M8              	48.05%		
B9RFC0              	45.72%		
Bootstrap support for B9SAR0 as seed ortholog is 86%.
Bootstrap support for A3GGU4 as seed ortholog is 78%.

Group of orthologs #1758. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:81

B9RBS7              	100.00%		A3LNW4              	100.00%
B9RBS3              	60.14%		
B9RC40              	56.67%		
Bootstrap support for B9RBS7 as seed ortholog is 100%.
Bootstrap support for A3LNW4 as seed ortholog is 100%.

Group of orthologs #1759. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:81

B9RV14              	100.00%		A3GI81              	100.00%
B9RTB5              	10.31%		
Bootstrap support for B9RV14 as seed ortholog is 100%.
Bootstrap support for A3GI81 as seed ortholog is 100%.

Group of orthologs #1760. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:28 S.stipitis:81

B9TAW4              	100.00%		A3LMR8              	100.00%
B9TGK5              	8.03%		
Bootstrap support for B9TAW4 as seed ortholog is 79%.
Bootstrap support for A3LMR8 as seed ortholog is 100%.

Group of orthologs #1761. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:81

B9RJ15              	100.00%		A3M0I5              	100.00%
Bootstrap support for B9RJ15 as seed ortholog is 100%.
Bootstrap support for A3M0I5 as seed ortholog is 100%.

Group of orthologs #1762. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:33 S.stipitis:81

B9SS29              	100.00%		A3GIB3              	100.00%
Bootstrap support for B9SS29 as seed ortholog is 92%.
Bootstrap support for A3GIB3 as seed ortholog is 100%.

Group of orthologs #1763. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:81

B9SWD9              	100.00%		A3LP63              	100.00%
Bootstrap support for B9SWD9 as seed ortholog is 100%.
Bootstrap support for A3LP63 as seed ortholog is 100%.

Group of orthologs #1764. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:81

B9SPP8              	100.00%		A3LYC8              	100.00%
Bootstrap support for B9SPP8 as seed ortholog is 100%.
Bootstrap support for A3LYC8 as seed ortholog is 100%.

Group of orthologs #1765. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:81 S.stipitis:81

B9T8C6              	100.00%		A3GI02              	100.00%
Bootstrap support for B9T8C6 as seed ortholog is 100%.
Bootstrap support for A3GI02 as seed ortholog is 100%.

Group of orthologs #1766. Best score 81 bits
Score difference with first non-orthologous sequence - R.communis:37 S.stipitis:81

B9T4M3              	100.00%		A3LUL1              	100.00%
Bootstrap support for B9T4M3 as seed ortholog is 76%.
Bootstrap support for A3LUL1 as seed ortholog is 100%.

Group of orthologs #1767. Best score 80 bits
Score difference with first non-orthologous sequence - R.communis:30 S.stipitis:28

B9S8J7              	100.00%		A3GFD4              	100.00%
B9R7H8              	21.71%		
Bootstrap support for B9S8J7 as seed ortholog is 85%.
Bootstrap support for A3GFD4 as seed ortholog is 81%.

Group of orthologs #1768. Best score 80 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:80

B9RF33              	100.00%		A3GHT6              	100.00%
Bootstrap support for B9RF33 as seed ortholog is 100%.
Bootstrap support for A3GHT6 as seed ortholog is 100%.

Group of orthologs #1769. Best score 80 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:80

B9RJ85              	100.00%		A3LTT8              	100.00%
Bootstrap support for B9RJ85 as seed ortholog is 100%.
Bootstrap support for A3LTT8 as seed ortholog is 100%.

Group of orthologs #1770. Best score 80 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:80

B9RIR5              	100.00%		A3LV90              	100.00%
Bootstrap support for B9RIR5 as seed ortholog is 100%.
Bootstrap support for A3LV90 as seed ortholog is 100%.

Group of orthologs #1771. Best score 80 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:80

B9SAI5              	100.00%		A3LY57              	100.00%
Bootstrap support for B9SAI5 as seed ortholog is 100%.
Bootstrap support for A3LY57 as seed ortholog is 100%.

Group of orthologs #1772. Best score 80 bits
Score difference with first non-orthologous sequence - R.communis:80 S.stipitis:80

B9SQL6              	100.00%		A3LV08              	100.00%
Bootstrap support for B9SQL6 as seed ortholog is 100%.
Bootstrap support for A3LV08 as seed ortholog is 100%.

Group of orthologs #1773. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:14 S.stipitis:79

B9R9T3              	100.00%		A3LN47              	100.00%
B9SV39              	100.00%		
B9SEP6              	14.52%		
B9RQL2              	11.31%		
B9RKP3              	10.70%		
Bootstrap support for B9R9T3 as seed ortholog is 79%.
Bootstrap support for B9SV39 as seed ortholog is 69%.
Alternative seed ortholog is B9SIE5 (14 bits away from this cluster)
Bootstrap support for A3LN47 as seed ortholog is 100%.

Group of orthologs #1774. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:79

G1D7B7              	100.00%		A3LQM6              	100.00%
B9S1A9              	55.56%		
B9S350              	32.89%		
Bootstrap support for G1D7B7 as seed ortholog is 100%.
Bootstrap support for A3LQM6 as seed ortholog is 100%.

Group of orthologs #1775. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:14 S.stipitis:79

B9S148              	100.00%		A3LRE6              	100.00%
B9S8I3              	80.21%		
Bootstrap support for B9S148 as seed ortholog is 70%.
Alternative seed ortholog is B9SQ38 (14 bits away from this cluster)
Bootstrap support for A3LRE6 as seed ortholog is 100%.

Group of orthologs #1776. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:35 S.stipitis:79

B9RXB7              	100.00%		A3LTT1              	100.00%
Bootstrap support for B9RXB7 as seed ortholog is 87%.
Bootstrap support for A3LTT1 as seed ortholog is 100%.

Group of orthologs #1777. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:79

B9S0W7              	100.00%		A3LT34              	100.00%
Bootstrap support for B9S0W7 as seed ortholog is 100%.
Bootstrap support for A3LT34 as seed ortholog is 100%.

Group of orthologs #1778. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:79

B9RVC9              	100.00%		A3LZ82              	100.00%
Bootstrap support for B9RVC9 as seed ortholog is 100%.
Bootstrap support for A3LZ82 as seed ortholog is 100%.

Group of orthologs #1779. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:13

B9S881              	100.00%		A3GH20              	100.00%
Bootstrap support for B9S881 as seed ortholog is 100%.
Bootstrap support for A3GH20 as seed ortholog is 77%.

Group of orthologs #1780. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:79

B9S2D2              	100.00%		A3LSI0              	100.00%
Bootstrap support for B9S2D2 as seed ortholog is 100%.
Bootstrap support for A3LSI0 as seed ortholog is 100%.

Group of orthologs #1781. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:79

B9SZV2              	100.00%		A3GFV7              	100.00%
Bootstrap support for B9SZV2 as seed ortholog is 100%.
Bootstrap support for A3GFV7 as seed ortholog is 100%.

Group of orthologs #1782. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:79 S.stipitis:79

B9T217              	100.00%		A3LWG3              	100.00%
Bootstrap support for B9T217 as seed ortholog is 100%.
Bootstrap support for A3LWG3 as seed ortholog is 100%.

Group of orthologs #1783. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:39 S.stipitis:36

B9T2G3              	100.00%		A3LYZ0              	100.00%
Bootstrap support for B9T2G3 as seed ortholog is 97%.
Bootstrap support for A3LYZ0 as seed ortholog is 97%.

Group of orthologs #1784. Best score 79 bits
Score difference with first non-orthologous sequence - R.communis:3 S.stipitis:79

B9TKU4              	100.00%		A3LSF2              	100.00%
Bootstrap support for B9TKU4 as seed ortholog is 52%.
Alternative seed ortholog is B9SC68 (3 bits away from this cluster)
Bootstrap support for A3LSF2 as seed ortholog is 100%.

Group of orthologs #1785. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:10 S.stipitis:78

B9SN34              	100.00%		A3LYA8              	100.00%
B9RK70              	48.52%		
B9T5V6              	32.28%		
B9RLA3              	16.91%		
B9T5W9              	16.79%		
B9RND0              	16.73%		
B9RKQ3              	15.31%		
B9SHA4              	15.06%		
B9RS56              	14.44%		
B9S6F8              	13.40%		
B9SH40              	8.21%		
B9RXT7              	6.30%		
B9SQR1              	5.12%		
Bootstrap support for B9SN34 as seed ortholog is 70%.
Alternative seed ortholog is B9SAD2 (10 bits away from this cluster)
Bootstrap support for A3LYA8 as seed ortholog is 100%.

Group of orthologs #1786. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9RYS2              	100.00%		A3LTL2              	100.00%
B9RPI2              	86.09%		
B9SBD2              	61.59%		
B9RPI1              	33.77%		
B9SLN0              	33.11%		
B9SQ41              	29.80%		
B9SLL8              	28.48%		
B9RBA9              	27.81%		
Bootstrap support for B9RYS2 as seed ortholog is 100%.
Bootstrap support for A3LTL2 as seed ortholog is 100%.

Group of orthologs #1787. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9RWX5              	100.00%		A3LVK1              	100.00%
B9RMZ0              	35.92%		
B9SVT3              	5.79%		
Bootstrap support for B9RWX5 as seed ortholog is 100%.
Bootstrap support for A3LVK1 as seed ortholog is 100%.

Group of orthologs #1788. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9RF52              	100.00%		A3GHT4              	100.00%
B9SE13              	21.18%		
Bootstrap support for B9RF52 as seed ortholog is 100%.
Bootstrap support for A3GHT4 as seed ortholog is 100%.

Group of orthologs #1789. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9T2Q0              	100.00%		A3LRX1              	100.00%
B9T795              	23.83%		
Bootstrap support for B9T2Q0 as seed ortholog is 100%.
Bootstrap support for A3LRX1 as seed ortholog is 100%.

Group of orthologs #1790. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9R910              	100.00%		A3LUI4              	100.00%
Bootstrap support for B9R910 as seed ortholog is 100%.
Bootstrap support for A3LUI4 as seed ortholog is 100%.

Group of orthologs #1791. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9S1E0              	100.00%		A3LN15              	100.00%
Bootstrap support for B9S1E0 as seed ortholog is 100%.
Bootstrap support for A3LN15 as seed ortholog is 100%.

Group of orthologs #1792. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9S253              	100.00%		A3M036              	100.00%
Bootstrap support for B9S253 as seed ortholog is 100%.
Bootstrap support for A3M036 as seed ortholog is 100%.

Group of orthologs #1793. Best score 78 bits
Score difference with first non-orthologous sequence - R.communis:78 S.stipitis:78

B9STX4              	100.00%		A3LXM9              	100.00%
Bootstrap support for B9STX4 as seed ortholog is 100%.
Bootstrap support for A3LXM9 as seed ortholog is 100%.

Group of orthologs #1794. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9S543              	100.00%		A3LMW5              	100.00%
B9RWK6              	90.36%		
B9SVX6              	82.09%		
B9RT39              	68.60%		
B9RPU0              	59.23%		
B9SCW7              	23.42%		
B9RP23              	21.49%		
B9T134              	16.80%		
Bootstrap support for B9S543 as seed ortholog is 100%.
Bootstrap support for A3LMW5 as seed ortholog is 100%.

Group of orthologs #1795. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9R9E3              	100.00%		A3M0J1              	100.00%
B9SRW2              	59.09%		
B9SRD5              	50.76%		
B9RM15              	48.48%		
B9SFC9              	26.14%		
Bootstrap support for B9R9E3 as seed ortholog is 100%.
Bootstrap support for A3M0J1 as seed ortholog is 100%.

Group of orthologs #1796. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9RQD3              	100.00%		A3LQH2              	100.00%
B9RKF4              	82.32%		
B9RKF5              	79.29%		
O82572              	79.29%		
Bootstrap support for B9RQD3 as seed ortholog is 100%.
Bootstrap support for A3LQH2 as seed ortholog is 100%.

Group of orthologs #1797. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9RE24              	100.00%		A3LPP1              	100.00%
B9T1E8              	32.10%		
B9RSL9              	31.89%		
Bootstrap support for B9RE24 as seed ortholog is 100%.
Bootstrap support for A3LPP1 as seed ortholog is 100%.

Group of orthologs #1798. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:18

B9SCC9              	100.00%		A3LX61              	100.00%
B9R9D3              	38.32%		
Bootstrap support for B9SCC9 as seed ortholog is 100%.
Bootstrap support for A3LX61 as seed ortholog is 73%.
Alternative seed ortholog is A3LW42 (18 bits away from this cluster)

Group of orthologs #1799. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:77

B9T3A8              	100.00%		A3LYA5              	100.00%
B9RR81              	85.88%		
Bootstrap support for B9T3A8 as seed ortholog is 79%.
Bootstrap support for A3LYA5 as seed ortholog is 100%.

Group of orthologs #1800. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9RGK4              	100.00%		A3LNS8              	100.00%
Bootstrap support for B9RGK4 as seed ortholog is 100%.
Bootstrap support for A3LNS8 as seed ortholog is 100%.

Group of orthologs #1801. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9RMG3              	100.00%		A3LQZ4              	100.00%
Bootstrap support for B9RMG3 as seed ortholog is 100%.
Bootstrap support for A3LQZ4 as seed ortholog is 100%.

Group of orthologs #1802. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9RKD3              	100.00%		A3M0C5              	100.00%
Bootstrap support for B9RKD3 as seed ortholog is 100%.
Bootstrap support for A3M0C5 as seed ortholog is 100%.

Group of orthologs #1803. Best score 77 bits
Score difference with first non-orthologous sequence - R.communis:77 S.stipitis:77

B9RZF9              	100.00%		A3LT21              	100.00%
Bootstrap support for B9RZF9 as seed ortholog is 100%.
Bootstrap support for A3LT21 as seed ortholog is 100%.

Group of orthologs #1804. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9S935              	100.00%		A3GHC0              	100.00%
B9SGN9              	53.98%		
Bootstrap support for B9S935 as seed ortholog is 100%.
Bootstrap support for A3GHC0 as seed ortholog is 100%.

Group of orthologs #1805. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9SM14              	100.00%		A3M0L6              	100.00%
B9ST49              	18.08%		
Bootstrap support for B9SM14 as seed ortholog is 100%.
Bootstrap support for A3M0L6 as seed ortholog is 100%.

Group of orthologs #1806. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9RGJ8              	100.00%		A3LX27              	100.00%
Bootstrap support for B9RGJ8 as seed ortholog is 100%.
Bootstrap support for A3LX27 as seed ortholog is 100%.

Group of orthologs #1807. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9RRJ0              	100.00%		A3LP92              	100.00%
Bootstrap support for B9RRJ0 as seed ortholog is 100%.
Bootstrap support for A3LP92 as seed ortholog is 100%.

Group of orthologs #1808. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:11

B9RRG6              	100.00%		A3LRA1              	100.00%
Bootstrap support for B9RRG6 as seed ortholog is 100%.
Bootstrap support for A3LRA1 as seed ortholog is 60%.
Alternative seed ortholog is A3LV83 (11 bits away from this cluster)

Group of orthologs #1809. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9RNR0              	100.00%		A3LXN6              	100.00%
Bootstrap support for B9RNR0 as seed ortholog is 100%.
Bootstrap support for A3LXN6 as seed ortholog is 100%.

Group of orthologs #1810. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9RXQ7              	100.00%		A3LNP0              	100.00%
Bootstrap support for B9RXQ7 as seed ortholog is 100%.
Bootstrap support for A3LNP0 as seed ortholog is 100%.

Group of orthologs #1811. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9S028              	100.00%		A3LPL9              	100.00%
Bootstrap support for B9S028 as seed ortholog is 100%.
Bootstrap support for A3LPL9 as seed ortholog is 100%.

Group of orthologs #1812. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9RTP0              	100.00%		A3LX30              	100.00%
Bootstrap support for B9RTP0 as seed ortholog is 100%.
Bootstrap support for A3LX30 as seed ortholog is 100%.

Group of orthologs #1813. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9SLV6              	100.00%		A3LW30              	100.00%
Bootstrap support for B9SLV6 as seed ortholog is 100%.
Bootstrap support for A3LW30 as seed ortholog is 100%.

Group of orthologs #1814. Best score 76 bits
Score difference with first non-orthologous sequence - R.communis:76 S.stipitis:76

B9SV31              	100.00%		A3LZ07              	100.00%
Bootstrap support for B9SV31 as seed ortholog is 100%.
Bootstrap support for A3LZ07 as seed ortholog is 100%.

Group of orthologs #1815. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9R9P0              	100.00%		A3LYB1              	100.00%
B9S2B7              	51.10%		
B9RUM4              	43.29%		
Bootstrap support for B9R9P0 as seed ortholog is 100%.
Bootstrap support for A3LYB1 as seed ortholog is 100%.

Group of orthologs #1816. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:5 S.stipitis:74

B9S2Q7              	100.00%		A3LW00              	100.00%
B9SNC3              	41.03%		A3LVZ9              	23.55%
Bootstrap support for B9S2Q7 as seed ortholog is 54%.
Alternative seed ortholog is B9RS55 (5 bits away from this cluster)
Bootstrap support for A3LW00 as seed ortholog is 100%.

Group of orthologs #1817. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9SZS6              	100.00%		A3GFT7              	100.00%
B9SA12              	26.46%		A3LQB0              	14.33%
Bootstrap support for B9SZS6 as seed ortholog is 100%.
Bootstrap support for A3GFT7 as seed ortholog is 100%.

Group of orthologs #1818. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9RK02              	100.00%		A3GH97              	100.00%
B9RK03              	75.21%		
Bootstrap support for B9RK02 as seed ortholog is 100%.
Bootstrap support for A3GH97 as seed ortholog is 100%.

Group of orthologs #1819. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9TF02              	100.00%		A3LYZ7              	100.00%
B9TKT6              	9.33%		
Bootstrap support for B9TF02 as seed ortholog is 100%.
Bootstrap support for A3LYZ7 as seed ortholog is 100%.

Group of orthologs #1820. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9RNZ4              	100.00%		A3GI78              	100.00%
Bootstrap support for B9RNZ4 as seed ortholog is 100%.
Bootstrap support for A3GI78 as seed ortholog is 100%.

Group of orthologs #1821. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9RDX4              	100.00%		A3LYH4              	100.00%
Bootstrap support for B9RDX4 as seed ortholog is 100%.
Bootstrap support for A3LYH4 as seed ortholog is 100%.

Group of orthologs #1822. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9RR78              	100.00%		A3GGY4              	100.00%
Bootstrap support for B9RR78 as seed ortholog is 100%.
Bootstrap support for A3GGY4 as seed ortholog is 100%.

Group of orthologs #1823. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9RPJ4              	100.00%		A3LQY1              	100.00%
Bootstrap support for B9RPJ4 as seed ortholog is 100%.
Bootstrap support for A3LQY1 as seed ortholog is 100%.

Group of orthologs #1824. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9S452              	100.00%		A3GIB1              	100.00%
Bootstrap support for B9S452 as seed ortholog is 100%.
Bootstrap support for A3GIB1 as seed ortholog is 100%.

Group of orthologs #1825. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9SQM9              	100.00%		A3GFA8              	100.00%
Bootstrap support for B9SQM9 as seed ortholog is 100%.
Bootstrap support for A3GFA8 as seed ortholog is 100%.

Group of orthologs #1826. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9SSV5              	100.00%		A3LQB8              	100.00%
Bootstrap support for B9SSV5 as seed ortholog is 100%.
Bootstrap support for A3LQB8 as seed ortholog is 100%.

Group of orthologs #1827. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9SWY6              	100.00%		A3LU03              	100.00%
Bootstrap support for B9SWY6 as seed ortholog is 100%.
Bootstrap support for A3LU03 as seed ortholog is 100%.

Group of orthologs #1828. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:29 S.stipitis:74

B9T2M2              	100.00%		A3LQN0              	100.00%
Bootstrap support for B9T2M2 as seed ortholog is 95%.
Bootstrap support for A3LQN0 as seed ortholog is 100%.

Group of orthologs #1829. Best score 74 bits
Score difference with first non-orthologous sequence - R.communis:74 S.stipitis:74

B9SZC1              	100.00%		A3LYQ3              	100.00%
Bootstrap support for B9SZC1 as seed ortholog is 100%.
Bootstrap support for A3LYQ3 as seed ortholog is 100%.

Group of orthologs #1830. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9SUE1              	100.00%		A3LRR0              	100.00%
B9RWP3              	24.13%		A3GF51              	7.77%
B9S7R1              	23.53%		
B9SLH0              	22.56%		
B9RAX9              	21.52%		
B9SM68              	21.30%		
B9RWM9              	20.03%		
B9SJH8              	19.73%		
B9S566              	19.43%		
B9R841              	18.76%		
B9R8B4              	18.62%		
B9RB89              	18.47%		
B9R6R5              	18.39%		
B9R9M2              	18.39%		
B9SZU5              	18.39%		
B9TAC6              	18.32%		
B9T173              	18.32%		
B9R6R6              	18.24%		
B9T1Q4              	18.17%		
B9S7N4              	17.94%		
B9RC79              	17.72%		
B9T390              	17.65%		
B9R9U0              	17.65%		
B9RVT1              	17.57%		
B9R9E2              	17.42%		
B9T4K2              	17.35%		
B9RBW0              	17.27%		
B9RQX5              	17.20%		
B9S7S2              	17.20%		
B9SAG6              	17.13%		
B9RS14              	16.83%		
B9R6R4              	16.68%		
B9R9V0              	16.53%		
B9S708              	16.46%		
B9SKD2              	16.08%		
B9T171              	15.93%		
B9S7D4              	15.71%		
B9RJJ2              	15.49%		
B9SS08              	15.41%		
B9SQH2              	15.19%		
B9ST85              	15.19%		
B9T419              	15.19%		
B9RY42              	15.12%		
B9SL80              	14.97%		
B9SQY7              	14.89%		
B9SM56              	14.82%		
B9SLE0              	14.67%		
B9T6W6              	14.59%		
B9RI14              	14.45%		
B9SRS9              	14.45%		
B9S1W6              	14.45%		
B9S8G0              	14.00%		
B9T0N7              	14.00%		
B9RMH3              	14.00%		
B9S8F7              	13.92%		
B9RGW3              	13.85%		
B9SEU2              	13.70%		
B9SEU5              	13.70%		
B9T577              	13.70%		
B9SL14              	13.48%		
B9T2Z7              	13.48%		
B9RKH6              	13.40%		
B9S062              	13.33%		
B9SJE5              	13.33%		
B9SEU1              	13.03%		
B9RN04              	12.96%		
B9RWV4              	12.88%		
B9S4G0              	12.81%		
B9SNP8              	12.73%		
B9SJW4              	12.58%		
B9SLK8              	12.43%		
B9S1N0              	12.43%		
B9T5A9              	12.43%		
B9STM4              	12.29%		
B9R936              	12.21%		
B9SQ07              	12.06%		
B9SYE5              	12.06%		
B9SLM2              	11.76%		
B9SS82              	11.47%		
B9SLM0              	11.47%		
B9RGN4              	11.39%		
B9S8F9              	11.39%		
B9SC16              	11.39%		
B9RUI5              	11.24%		
B9SLD7              	11.24%		
B9T8C3              	11.24%		
B9S479              	11.17%		
B9SIS0              	11.09%		
B9S2Z2              	10.95%		
B9T3Y7              	10.95%		
B9SRM2              	10.95%		
B9S8F8              	10.72%		
B9SN87              	10.72%		
B9SB23              	10.57%		
B9T525              	10.35%		
B9SHD1              	10.35%		
B9T3S1              	10.35%		
B9T6G8              	10.20%		
B9R7U7              	10.13%		
B9T5A8              	10.13%		
B9STF3              	10.05%		
B9RRR5              	9.98%		
B9RAQ8              	9.98%		
B9RED2              	9.83%		
B9S563              	9.83%		
B9T1C2              	9.68%		
B9SRR7              	9.46%		
B9R9P2              	9.38%		
B9RBF5              	9.31%		
B9RIN2              	9.31%		
B9RR77              	9.31%		
B9SPT0              	9.01%		
B9T3B1              	9.01%		
B9T4U3              	8.94%		
B9RBS2              	8.86%		
B9T2T2              	8.79%		
B9SZF8              	8.64%		
B9RHT1              	8.64%		
B9R782              	8.49%		
B9SS83              	8.41%		
B9S9R2              	8.34%		
B9RB59              	8.27%		
B9T5F6              	8.19%		
B9RY46              	8.19%		
B9T7Q3              	8.12%		
B9SG04              	8.04%		
B9SI43              	8.04%		
B9SNG9              	8.04%		
B9RLB7              	7.97%		
B9RUC2              	7.97%		
B9S4H4              	7.59%		
B9S8U2              	7.22%		
B9RXF7              	7.15%		
B9RHS8              	7.07%		
B9RBL3              	6.92%		
B9SUY8              	6.92%		
B9S2A4              	6.85%		
B9SI80              	6.85%		
B9RH25              	6.78%		
B9RW50              	6.70%		
B9S5Z2              	6.55%		
B9T272              	6.33%		
B9T6W5              	6.25%		
B9RDB7              	5.96%		
B9RC93              	5.88%		
B9SLN9              	5.73%		
B9RYA1              	5.58%		
B9R761              	5.44%		
B9STH1              	5.44%		
B9S095              	5.29%		
B9SQ51              	5.29%		
B9S8A7              	5.21%		
B9RL27              	5.21%		
B9SPH8              	5.21%		
B9S521              	5.06%		
Bootstrap support for B9SUE1 as seed ortholog is 100%.
Bootstrap support for A3LRR0 as seed ortholog is 100%.

Group of orthologs #1831. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9S789              	100.00%		A3LZC7              	100.00%
B9SM34              	23.25%		
B9S2E8              	23.15%		
B9S1N6              	23.05%		
B9RA74              	21.64%		
B9R9U2              	20.84%		
B9SRF9              	20.84%		
B9RZG0              	20.74%		
B9SJZ3              	20.64%		
B9RFB6              	20.24%		
B9R7P1              	20.04%		
B9T3D5              	19.64%		
B9SDG1              	19.44%		
B9SD26              	19.44%		
B9RLG0              	19.24%		
B9T0C5              	18.94%		
B9RZU8              	18.94%		
B9T4Q6              	18.74%		
B9T2B9              	18.74%		
B9RP84              	18.64%		
B9RV43              	18.64%		
B9R997              	18.54%		
B9SMD1              	17.64%		
B9T6M2              	17.54%		
B9SZL2              	17.43%		
B9RM74              	17.43%		
B9SJK1              	17.23%		
B9SQV1              	17.13%		
B9RXK9              	17.13%		
B9RY36              	17.13%		
B9RL03              	17.03%		
B9SKG1              	16.73%		
B9SJ30              	16.53%		
B9SNU2              	16.43%		
B9S7L1              	16.33%		
B9RT56              	16.23%		
B9SQ74              	16.13%		
B9T4Q7              	16.03%		
B9SZC0              	15.93%		
B9S070              	15.83%		
B9SU41              	15.73%		
B9SMY0              	15.53%		
B9T3S4              	15.33%		
B9RPS0              	14.73%		
B9RI58              	14.43%		
B9S4U2              	14.43%		
B9REV6              	13.93%		
B9S636              	13.93%		
B9SVN3              	13.93%		
B9RPX5              	13.83%		
B9SPQ9              	13.73%		
B9RY68              	13.73%		
B9S6W0              	13.73%		
B9T3F3              	13.23%		
B9SU85              	13.13%		
B9R8M0              	12.63%		
B9S7L0              	12.63%		
B9T3G5              	12.53%		
B9T3M8              	12.53%		
B9RZM2              	12.22%		
B9SIR2              	12.02%		
B9SW54              	11.92%		
B9R902              	11.82%		
B9RLV9              	11.52%		
B9SBC5              	11.42%		
B9RFI9              	11.32%		
B9T720              	11.32%		
B9T662              	11.32%		
B9T1X9              	10.72%		
B9SQC8              	10.72%		
B9SX89              	10.32%		
B9SYB6              	10.32%		
B9R8Z2              	10.12%		
B9RKP8              	10.02%		
B9RS90              	9.92%		
B9S6R2              	9.92%		
B9RQC9              	9.82%		
B9S2U8              	9.82%		
B9SU37              	9.72%		
B9SCV6              	9.02%		
B9STL7              	9.02%		
B9S207              	9.02%		
B9RFQ7              	8.82%		
B9SYW9              	8.82%		
B9T2X9              	8.62%		
B9S1X9              	8.32%		
B9RS99              	8.22%		
B9RTM5              	8.02%		
B9RT09              	8.02%		
B9RUK2              	7.92%		
B9RNF3              	7.82%		
B9RWE2              	7.82%		
B9RNK1              	7.72%		
B9RMY5              	7.62%		
B9SYJ4              	7.62%		
B9SBK1              	7.41%		
B9SZP7              	7.21%		
B9T6F3              	7.11%		
B9SQ91              	7.01%		
B9S7R3              	6.81%		
B9SY25              	6.61%		
B9SYN1              	6.51%		
B9S3M3              	6.51%		
B9RXQ8              	6.51%		
B9T1Y0              	6.51%		
B9SZK3              	6.21%		
B9RMN2              	6.21%		
B9SQY5              	6.01%		
B9STG7              	6.01%		
B9RGY7              	5.71%		
B9T7J0              	5.71%		
B9R9B6              	5.61%		
B9SJJ1              	5.61%		
B9RN92              	5.41%		
B9RTG3              	5.41%		
B9T2W5              	5.31%		
B9RH42              	5.21%		
B9RZE4              	5.21%		
B9T3T5              	5.21%		
B9RSF8              	5.21%		
B9RVL0              	5.11%		
B9S049              	5.11%		
B9RI03              	5.01%		
Bootstrap support for B9S789 as seed ortholog is 100%.
Bootstrap support for A3LZC7 as seed ortholog is 100%.

Group of orthologs #1832. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9REQ6              	100.00%		A3LU66              	100.00%
B9S5V1              	39.18%		
Bootstrap support for B9REQ6 as seed ortholog is 100%.
Bootstrap support for A3LU66 as seed ortholog is 100%.

Group of orthologs #1833. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9RRV9              	100.00%		A3LU35              	100.00%
                    	       		A3LU36              	23.94%
Bootstrap support for B9RRV9 as seed ortholog is 100%.
Bootstrap support for A3LU35 as seed ortholog is 100%.

Group of orthologs #1834. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9SQ18              	100.00%		A3GGD6              	100.00%
B9T563              	26.34%		
Bootstrap support for B9SQ18 as seed ortholog is 100%.
Bootstrap support for A3GGD6 as seed ortholog is 100%.

Group of orthologs #1835. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9T3D8              	100.00%		A3LW45              	100.00%
B9SQW3              	48.48%		
Bootstrap support for B9T3D8 as seed ortholog is 100%.
Bootstrap support for A3LW45 as seed ortholog is 100%.

Group of orthologs #1836. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9RZN1              	100.00%		A3GFN8              	100.00%
Bootstrap support for B9RZN1 as seed ortholog is 100%.
Bootstrap support for A3GFN8 as seed ortholog is 100%.

Group of orthologs #1837. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9RV31              	100.00%		A3LWI1              	100.00%
Bootstrap support for B9RV31 as seed ortholog is 100%.
Bootstrap support for A3LWI1 as seed ortholog is 100%.

Group of orthologs #1838. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:14

B9T1U1              	100.00%		A3LQL7              	100.00%
Bootstrap support for B9T1U1 as seed ortholog is 64%.
Alternative seed ortholog is B9T3H1 (19 bits away from this cluster)
Bootstrap support for A3LQL7 as seed ortholog is 45%.
Alternative seed ortholog is A3LR35 (14 bits away from this cluster)

Group of orthologs #1839. Best score 73 bits
Score difference with first non-orthologous sequence - R.communis:73 S.stipitis:73

B9TBB5              	100.00%		A3LYM1              	100.00%
Bootstrap support for B9TBB5 as seed ortholog is 100%.
Bootstrap support for A3LYM1 as seed ortholog is 100%.

Group of orthologs #1840. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:26 S.stipitis:72

B9S309              	100.00%		A3LTT9              	100.00%
B9R985              	26.29%		
B9S8T5              	23.51%		
B9RX78              	5.18%		
Bootstrap support for B9S309 as seed ortholog is 85%.
Bootstrap support for A3LTT9 as seed ortholog is 100%.

Group of orthologs #1841. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9RV72              	100.00%		A3LYC5              	100.00%
                    	       		A3LQC4              	20.45%
Bootstrap support for B9RV72 as seed ortholog is 100%.
Bootstrap support for A3LYC5 as seed ortholog is 100%.

Group of orthologs #1842. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9SKB6              	100.00%		A3LPN8              	100.00%
B9R8X7              	23.93%		
Bootstrap support for B9SKB6 as seed ortholog is 100%.
Bootstrap support for A3LPN8 as seed ortholog is 100%.

Group of orthologs #1843. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9R773              	100.00%		A3LN96              	100.00%
Bootstrap support for B9R773 as seed ortholog is 100%.
Bootstrap support for A3LN96 as seed ortholog is 100%.

Group of orthologs #1844. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9SZ63              	100.00%		A3GF37              	100.00%
Bootstrap support for B9SZ63 as seed ortholog is 100%.
Bootstrap support for A3GF37 as seed ortholog is 100%.

Group of orthologs #1845. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9T3G2              	100.00%		A3GGA4              	100.00%
Bootstrap support for B9T3G2 as seed ortholog is 100%.
Bootstrap support for A3GGA4 as seed ortholog is 100%.

Group of orthologs #1846. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9T5A6              	100.00%		A3LN98              	100.00%
Bootstrap support for B9T5A6 as seed ortholog is 100%.
Bootstrap support for A3LN98 as seed ortholog is 100%.

Group of orthologs #1847. Best score 72 bits
Score difference with first non-orthologous sequence - R.communis:72 S.stipitis:72

B9T6F0              	100.00%		A3LXG0              	100.00%
Bootstrap support for B9T6F0 as seed ortholog is 100%.
Bootstrap support for A3LXG0 as seed ortholog is 100%.

Group of orthologs #1848. Best score 71 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:71

B9R852              	75.27%		A3LUX3              	100.00%
B9S1L4              	100.00%		A3LZA0              	100.00%
B9SNC5              	54.18%		A3LS65              	75.79%
B9SM54              	41.43%		A3LVE5              	49.82%
B9SM51              	39.89%		A3LNV7              	38.13%
B9SM55              	25.82%		A3GGY0              	37.68%
                    	       		A3GGS5              	26.25%
                    	       		A3LRB7              	25.18%
                    	       		A3M039              	22.00%
                    	       		A3GFL8              	21.35%
                    	       		A3GG77              	20.52%
                    	       		A3LSN9              	18.02%
                    	       		A3GET0              	17.38%
                    	       		A3LUI5              	15.62%
Bootstrap support for B9S1L4 as seed ortholog is 100%.
Bootstrap support for A3LUX3 as seed ortholog is 100%.
Bootstrap support for A3LZA0 as seed ortholog is 100%.

Group of orthologs #1849. Best score 71 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:71

B9RSQ4              	100.00%		A3LVR2              	100.00%
B9RN19              	37.06%		
B9T675              	36.62%		
B9T676              	36.40%		
B9SYB9              	25.22%		
Bootstrap support for B9RSQ4 as seed ortholog is 100%.
Bootstrap support for A3LVR2 as seed ortholog is 100%.

Group of orthologs #1850. Best score 71 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:71

B9TFX5              	100.00%		A3LSC0              	100.00%
B9T9L9              	5.70%		
Bootstrap support for B9TFX5 as seed ortholog is 71%.
Alternative seed ortholog is B9SNZ2 (18 bits away from this cluster)
Bootstrap support for A3LSC0 as seed ortholog is 100%.

Group of orthologs #1851. Best score 71 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:71

B9S4J8              	100.00%		A3GFT9              	100.00%
Bootstrap support for B9S4J8 as seed ortholog is 100%.
Bootstrap support for A3GFT9 as seed ortholog is 100%.

Group of orthologs #1852. Best score 71 bits
Score difference with first non-orthologous sequence - R.communis:2 S.stipitis:71

B9SH60              	100.00%		A3LYI2              	100.00%
Bootstrap support for B9SH60 as seed ortholog is 50%.
Alternative seed ortholog is B9TG00 (2 bits away from this cluster)
Bootstrap support for A3LYI2 as seed ortholog is 100%.

Group of orthologs #1853. Best score 71 bits
Score difference with first non-orthologous sequence - R.communis:71 S.stipitis:71

B9TH23              	100.00%		A3LUD7              	100.00%
Bootstrap support for B9TH23 as seed ortholog is 100%.
Bootstrap support for A3LUD7 as seed ortholog is 100%.

Group of orthologs #1854. Best score 70 bits
Score difference with first non-orthologous sequence - R.communis:70 S.stipitis:70

B9RNR1              	100.00%		A3M0L1              	100.00%
B9S5D5              	62.98%		
B9RZ18              	26.36%		
Bootstrap support for B9RNR1 as seed ortholog is 100%.
Bootstrap support for A3M0L1 as seed ortholog is 100%.

Group of orthologs #1855. Best score 70 bits
Score difference with first non-orthologous sequence - R.communis:70 S.stipitis:70

B9RG41              	100.00%		A3LWG7              	100.00%
Bootstrap support for B9RG41 as seed ortholog is 100%.
Bootstrap support for A3LWG7 as seed ortholog is 100%.

Group of orthologs #1856. Best score 70 bits
Score difference with first non-orthologous sequence - R.communis:70 S.stipitis:70

B9RQV5              	100.00%		A3LSS0              	100.00%
Bootstrap support for B9RQV5 as seed ortholog is 100%.
Bootstrap support for A3LSS0 as seed ortholog is 100%.

Group of orthologs #1857. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9RBS9              	100.00%		A3GFW6              	100.00%
B9THS4              	69.79%		
Bootstrap support for B9RBS9 as seed ortholog is 100%.
Bootstrap support for A3GFW6 as seed ortholog is 100%.

Group of orthologs #1858. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9SH11              	100.00%		A3LX96              	100.00%
B9R6Z2              	15.83%		
Bootstrap support for B9SH11 as seed ortholog is 100%.
Bootstrap support for A3LX96 as seed ortholog is 100%.

Group of orthologs #1859. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9SZU7              	100.00%		A3LTZ8              	100.00%
B9RG55              	56.49%		
Bootstrap support for B9SZU7 as seed ortholog is 100%.
Bootstrap support for A3LTZ8 as seed ortholog is 100%.

Group of orthologs #1860. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9RNT0              	100.00%		A3LPJ1              	100.00%
Bootstrap support for B9RNT0 as seed ortholog is 100%.
Bootstrap support for A3LPJ1 as seed ortholog is 100%.

Group of orthologs #1861. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9RDP5              	100.00%		A3M0L7              	100.00%
Bootstrap support for B9RDP5 as seed ortholog is 100%.
Bootstrap support for A3M0L7 as seed ortholog is 100%.

Group of orthologs #1862. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9RTY3              	100.00%		A3GGJ8              	100.00%
Bootstrap support for B9RTY3 as seed ortholog is 100%.
Bootstrap support for A3GGJ8 as seed ortholog is 100%.

Group of orthologs #1863. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9S2I8              	100.00%		A3LVS3              	100.00%
Bootstrap support for B9S2I8 as seed ortholog is 100%.
Bootstrap support for A3LVS3 as seed ortholog is 100%.

Group of orthologs #1864. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9SF44              	100.00%		A3LQ61              	100.00%
Bootstrap support for B9SF44 as seed ortholog is 100%.
Bootstrap support for A3LQ61 as seed ortholog is 100%.

Group of orthologs #1865. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9SY30              	100.00%		A3LPD6              	100.00%
Bootstrap support for B9SY30 as seed ortholog is 100%.
Bootstrap support for A3LPD6 as seed ortholog is 100%.

Group of orthologs #1866. Best score 69 bits
Score difference with first non-orthologous sequence - R.communis:69 S.stipitis:69

B9SX99              	100.00%		A3LYN7              	100.00%
Bootstrap support for B9SX99 as seed ortholog is 100%.
Bootstrap support for A3LYN7 as seed ortholog is 100%.

Group of orthologs #1867. Best score 68 bits
Score difference with first non-orthologous sequence - R.communis:68 S.stipitis:68

B9RX42              	100.00%		A3LUF2              	100.00%
B9RXB4              	55.03%		A3LUF3              	24.21%
B9RX48              	54.92%		A3GI47              	12.42%
B9RVK5              	33.35%		A3GFR8              	10.76%
B9T0F6              	28.94%		A3GFZ2              	9.41%
B9RM78              	28.46%		A3LV35              	9.18%
B9R9B1              	27.92%		A3GI97              	8.23%
B9RG99              	26.95%		A3GI96              	7.75%
B9S523              	26.20%		
B9RMH0              	25.77%		
B9RG89              	22.22%		
B9RMG8              	21.57%		
B9RMI5              	20.60%		
B9SJG3              	20.39%		
B9SE41              	19.58%		
B9SWX6              	19.15%		
B9SWX7              	18.40%		
B9SGA2              	17.59%		
B9RNT4              	17.59%		
B9RM08              	17.00%		
B9RNT7              	16.73%		
B9RG90              	15.98%		
B9SVV1              	15.38%		
B9S524              	9.68%		
B9S941              	7.85%		
Bootstrap support for B9RX42 as seed ortholog is 100%.
Bootstrap support for A3LUF2 as seed ortholog is 100%.

Group of orthologs #1868. Best score 68 bits
Score difference with first non-orthologous sequence - R.communis:68 S.stipitis:68

B9T385              	100.00%		A3GFR5              	100.00%
B9SQV5              	20.32%		
Bootstrap support for B9T385 as seed ortholog is 100%.
Bootstrap support for A3GFR5 as seed ortholog is 100%.

Group of orthologs #1869. Best score 68 bits
Score difference with first non-orthologous sequence - R.communis:68 S.stipitis:68

B9R8C9              	100.00%		A3LRN3              	100.00%
Bootstrap support for B9R8C9 as seed ortholog is 100%.
Bootstrap support for A3LRN3 as seed ortholog is 100%.

Group of orthologs #1870. Best score 68 bits
Score difference with first non-orthologous sequence - R.communis:68 S.stipitis:68

B9T5B1              	100.00%		A3LR55              	100.00%
Bootstrap support for B9T5B1 as seed ortholog is 100%.
Bootstrap support for A3LR55 as seed ortholog is 100%.

Group of orthologs #1871. Best score 67 bits
Score difference with first non-orthologous sequence - R.communis:67 S.stipitis:67

B9S8X4              	100.00%		A3LNT9              	100.00%
B9S8X3              	100.00%		A3LTJ1              	100.00%
B9RH71              	18.12%		
B9SF12              	17.66%		
B9RH69              	15.83%		
Bootstrap support for B9S8X4 as seed ortholog is 100%.
Bootstrap support for B9S8X3 as seed ortholog is 100%.
Bootstrap support for A3LNT9 as seed ortholog is 100%.
Bootstrap support for A3LTJ1 as seed ortholog is 100%.

Group of orthologs #1872. Best score 67 bits
Score difference with first non-orthologous sequence - R.communis:19 S.stipitis:67

B9RYX8              	100.00%		A3GGN2              	100.00%
Bootstrap support for B9RYX8 as seed ortholog is 87%.
Bootstrap support for A3GGN2 as seed ortholog is 100%.

Group of orthologs #1873. Best score 67 bits
Score difference with first non-orthologous sequence - R.communis:67 S.stipitis:67

B9TIS7              	100.00%		A3GFM0              	100.00%
Bootstrap support for B9TIS7 as seed ortholog is 100%.
Bootstrap support for A3GFM0 as seed ortholog is 100%.

Group of orthologs #1874. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:66

B9RMZ5              	100.00%		A3LY58              	100.00%
B9TMK9              	21.26%		
B9RKC2              	20.67%		
B9RKC3              	18.70%		
B9SC99              	17.52%		
B9RYF5              	17.32%		
B9SCA0              	16.93%		
B9SNF3              	16.93%		
B9SCA1              	15.94%		
Bootstrap support for B9RMZ5 as seed ortholog is 100%.
Bootstrap support for A3LY58 as seed ortholog is 100%.

Group of orthologs #1875. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:9

B9SZR9              	100.00%		A3LW73              	100.00%
B9T1E1              	8.99%		
B9RSX1              	7.24%		
B9SGV2              	7.02%		
B9S368              	6.80%		
B9T4I1              	5.92%		
Bootstrap support for B9SZR9 as seed ortholog is 69%.
Alternative seed ortholog is B9SY46 (18 bits away from this cluster)
Bootstrap support for A3LW73 as seed ortholog is 71%.
Alternative seed ortholog is A3LV28 (9 bits away from this cluster)

Group of orthologs #1876. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:66

B9SMU4              	100.00%		A3LPH8              	100.00%
B9RD84              	9.74%		
Bootstrap support for B9SMU4 as seed ortholog is 100%.
Bootstrap support for A3LPH8 as seed ortholog is 100%.

Group of orthologs #1877. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:9

B9SW41              	100.00%		A3LTV7              	100.00%
B9SA62              	36.22%		
Bootstrap support for B9SW41 as seed ortholog is 100%.
Bootstrap support for A3LTV7 as seed ortholog is 51%.
Alternative seed ortholog is A3GI16 (9 bits away from this cluster)

Group of orthologs #1878. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:66

B9RLN8              	100.00%		A3LND7              	100.00%
Bootstrap support for B9RLN8 as seed ortholog is 100%.
Bootstrap support for A3LND7 as seed ortholog is 100%.

Group of orthologs #1879. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:66

B9RQH5              	100.00%		A3GI27              	100.00%
Bootstrap support for B9RQH5 as seed ortholog is 100%.
Bootstrap support for A3GI27 as seed ortholog is 100%.

Group of orthologs #1880. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:66

B9RRU9              	100.00%		A3LN93              	100.00%
Bootstrap support for B9RRU9 as seed ortholog is 100%.
Bootstrap support for A3LN93 as seed ortholog is 100%.

Group of orthologs #1881. Best score 66 bits
Score difference with first non-orthologous sequence - R.communis:66 S.stipitis:66

B9T273              	100.00%		A3LYF8              	100.00%
Bootstrap support for B9T273 as seed ortholog is 100%.
Bootstrap support for A3LYF8 as seed ortholog is 100%.

Group of orthologs #1882. Best score 65 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:65

B9S7E6              	100.00%		A3LZA9              	100.00%
B9SFH8              	37.44%		
B9T4G9              	34.02%		
B9SED9              	33.78%		
B9SNR8              	33.66%		
B9S378              	32.56%		
B9RUI1              	30.73%		
B9RTM7              	24.39%		
B9T7W4              	23.17%		
Bootstrap support for B9S7E6 as seed ortholog is 100%.
Bootstrap support for A3LZA9 as seed ortholog is 100%.

Group of orthologs #1883. Best score 65 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:65

B9REQ3              	100.00%		A3GFI9              	100.00%
Bootstrap support for B9REQ3 as seed ortholog is 100%.
Bootstrap support for A3GFI9 as seed ortholog is 100%.

Group of orthologs #1884. Best score 65 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:65

B9SPZ8              	100.00%		A3GH60              	100.00%
Bootstrap support for B9SPZ8 as seed ortholog is 100%.
Bootstrap support for A3GH60 as seed ortholog is 100%.

Group of orthologs #1885. Best score 65 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:65

B9ST57              	100.00%		A3GFG1              	100.00%
Bootstrap support for B9ST57 as seed ortholog is 100%.
Bootstrap support for A3GFG1 as seed ortholog is 100%.

Group of orthologs #1886. Best score 65 bits
Score difference with first non-orthologous sequence - R.communis:65 S.stipitis:65

B9T2T8              	100.00%		A3GFL1              	100.00%
Bootstrap support for B9T2T8 as seed ortholog is 100%.
Bootstrap support for A3GFL1 as seed ortholog is 100%.

Group of orthologs #1887. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RCI7              	100.00%		A3LP96              	100.00%
B9RR53              	53.97%		A3GG56              	58.74%
B9RFA3              	50.85%		A3GG54              	44.50%
B9RA34              	50.19%		A3LS62              	32.44%
B9T3J8              	41.21%		A3GFP0              	27.36%
B9RG33              	34.68%		
B9SZS5              	33.48%		
Bootstrap support for B9RCI7 as seed ortholog is 100%.
Bootstrap support for A3LP96 as seed ortholog is 100%.

Group of orthologs #1888. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9S9V4              	100.00%		A3LS67              	100.00%
B9SL91              	7.47%		
B9T3F0              	6.67%		
B9S9M7              	6.67%		
B9TJN5              	6.67%		
B9S9N1              	6.46%		
B9S9M5              	6.26%		
B9S9M2              	6.06%		
B9S9N0              	6.06%		
B9T3E9              	5.45%		
Bootstrap support for B9S9V4 as seed ortholog is 100%.
Bootstrap support for A3LS67 as seed ortholog is 100%.

Group of orthologs #1889. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RM38              	100.00%		A3LMZ0              	100.00%
B9T6H4              	100.00%		
B9RM39              	73.91%		
Bootstrap support for B9RM38 as seed ortholog is 100%.
Bootstrap support for B9T6H4 as seed ortholog is 100%.
Bootstrap support for A3LMZ0 as seed ortholog is 100%.

Group of orthologs #1890. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9SRF2              	100.00%		A3LWR5              	100.00%
B9T2K7              	6.90%		
B9SVK7              	6.13%		
Bootstrap support for B9SRF2 as seed ortholog is 100%.
Bootstrap support for A3LWR5 as seed ortholog is 100%.

Group of orthologs #1891. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RN34              	100.00%		A3LPR7              	100.00%
B9RBL4              	10.91%		
Bootstrap support for B9RN34 as seed ortholog is 100%.
Bootstrap support for A3LPR7 as seed ortholog is 100%.

Group of orthologs #1892. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:8 S.stipitis:64

B9RQL3              	100.00%		A3LWT4              	100.00%
B9RS49              	29.75%		
Bootstrap support for B9RQL3 as seed ortholog is 56%.
Alternative seed ortholog is B9S773 (8 bits away from this cluster)
Bootstrap support for A3LWT4 as seed ortholog is 100%.

Group of orthologs #1893. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9SFU5              	100.00%		A3LWG1              	100.00%
B9T7A2              	15.06%		
Bootstrap support for B9SFU5 as seed ortholog is 100%.
Bootstrap support for A3LWG1 as seed ortholog is 100%.

Group of orthologs #1894. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RG44              	100.00%		A3LUY1              	100.00%
Bootstrap support for B9RG44 as seed ortholog is 100%.
Bootstrap support for A3LUY1 as seed ortholog is 100%.

Group of orthologs #1895. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RFB3              	100.00%		A3LXR0              	100.00%
Bootstrap support for B9RFB3 as seed ortholog is 100%.
Bootstrap support for A3LXR0 as seed ortholog is 100%.

Group of orthologs #1896. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RNG6              	100.00%		A3LY50              	100.00%
Bootstrap support for B9RNG6 as seed ortholog is 100%.
Bootstrap support for A3LY50 as seed ortholog is 100%.

Group of orthologs #1897. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9RRZ7              	100.00%		A3LVL6              	100.00%
Bootstrap support for B9RRZ7 as seed ortholog is 100%.
Bootstrap support for A3LVL6 as seed ortholog is 100%.

Group of orthologs #1898. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:2 S.stipitis:64

B9SL96              	100.00%		A3LQT1              	100.00%
Bootstrap support for B9SL96 as seed ortholog is 80%.
Bootstrap support for A3LQT1 as seed ortholog is 100%.

Group of orthologs #1899. Best score 64 bits
Score difference with first non-orthologous sequence - R.communis:64 S.stipitis:64

B9SN63              	100.00%		A3LQA9              	100.00%
Bootstrap support for B9SN63 as seed ortholog is 100%.
Bootstrap support for A3LQA9 as seed ortholog is 100%.

Group of orthologs #1900. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9T239              	100.00%		A3LNU5              	100.00%
B9T5Z6              	49.30%		
B9T7R2              	29.35%		
B9T7L4              	28.10%		
B9SZM3              	26.93%		
B9SZM4              	26.19%		
B9T2P2              	19.44%		
B9SKP2              	16.65%		
B9S154              	15.26%		
B9RVB0              	15.19%		
B9SZM5              	15.11%		
B9SBP1              	14.97%		
B9RAZ4              	14.75%		
B9SG85              	14.31%		
B9SWC8              	14.01%		
B9SZK5              	13.79%		
B9SN92              	13.43%		
B9SN90              	13.35%		
B9RLU0              	13.35%		
B9SUC9              	12.77%		
B9RFV2              	12.40%		
B9T4Y2              	12.33%		
B9RRZ6              	12.25%		
B9SIK1              	11.81%		
B9SBT3              	11.52%		
B9S2F4              	11.15%		
B9SQ64              	11.08%		
B9T8M3              	10.86%		
B9SS80              	10.64%		
B9SLD9              	9.83%		
B9RGI4              	9.68%		
B9SU71              	9.54%		
B9RGQ7              	9.17%		
B9T2Z8              	8.44%		
B9SCX4              	7.48%		
B9RGT9              	6.24%		
B9SHN0              	5.72%		
B9RGM3              	5.50%		
Bootstrap support for B9T239 as seed ortholog is 100%.
Bootstrap support for A3LNU5 as seed ortholog is 100%.

Group of orthologs #1901. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:6

B9R8P6              	100.00%		A3GGA1              	100.00%
B9SQ35              	38.60%		
B9SLN3              	35.96%		
B9SDW3              	32.89%		
B9RGI3              	19.74%		
B9S139              	8.77%		
Bootstrap support for B9R8P6 as seed ortholog is 100%.
Bootstrap support for A3GGA1 as seed ortholog is 72%.
Alternative seed ortholog is A3LZY5 (6 bits away from this cluster)

Group of orthologs #1902. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9SYD9              	100.00%		A3LVA5              	100.00%
B9SJ22              	50.90%		
B9RG80              	26.95%		
B9RGV1              	26.05%		
B9RG15              	20.96%		
Bootstrap support for B9SYD9 as seed ortholog is 100%.
Bootstrap support for A3LVA5 as seed ortholog is 100%.

Group of orthologs #1903. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9RER2              	100.00%		A3LVS1              	100.00%
Bootstrap support for B9RER2 as seed ortholog is 100%.
Bootstrap support for A3LVS1 as seed ortholog is 100%.

Group of orthologs #1904. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9RHE0              	100.00%		A3LXP7              	100.00%
Bootstrap support for B9RHE0 as seed ortholog is 100%.
Bootstrap support for A3LXP7 as seed ortholog is 100%.

Group of orthologs #1905. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9RU89              	100.00%		A3LSW9              	100.00%
Bootstrap support for B9RU89 as seed ortholog is 100%.
Bootstrap support for A3LSW9 as seed ortholog is 100%.

Group of orthologs #1906. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9S5J2              	100.00%		A3GF12              	100.00%
Bootstrap support for B9S5J2 as seed ortholog is 100%.
Bootstrap support for A3GF12 as seed ortholog is 100%.

Group of orthologs #1907. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9SDW8              	100.00%		A3LV09              	100.00%
Bootstrap support for B9SDW8 as seed ortholog is 100%.
Bootstrap support for A3LV09 as seed ortholog is 100%.

Group of orthologs #1908. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9SPU2              	100.00%		A3GHD4              	100.00%
Bootstrap support for B9SPU2 as seed ortholog is 100%.
Bootstrap support for A3GHD4 as seed ortholog is 100%.

Group of orthologs #1909. Best score 63 bits
Score difference with first non-orthologous sequence - R.communis:63 S.stipitis:63

B9SVD8              	100.00%		A3LSY3              	100.00%
Bootstrap support for B9SVD8 as seed ortholog is 100%.
Bootstrap support for A3LSY3 as seed ortholog is 100%.

Group of orthologs #1910. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9T2S4              	100.00%		A3LWD2              	100.00%
B9RSB7              	74.98%		
B9T3B0              	27.62%		
B9RAG8              	24.85%		
B9SF67              	20.99%		
B9T911              	20.82%		
B9SNP4              	19.73%		
B9T041              	19.65%		
B9RM96              	19.06%		
B9S3S8              	18.98%		
B9RLN4              	18.22%		
B9RNN3              	15.37%		
B9T7P4              	13.43%		
B9R6Z3              	10.33%		
B9SQM4              	9.57%		
Bootstrap support for B9T2S4 as seed ortholog is 100%.
Bootstrap support for A3LWD2 as seed ortholog is 100%.

Group of orthologs #1911. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9RZW4              	100.00%		A3LQ29              	100.00%
B9RFM7              	81.79%		A3GFI3              	12.32%
B9RFM8              	80.46%		
B9RN94              	79.80%		
B9SH95              	72.35%		
Bootstrap support for B9RZW4 as seed ortholog is 100%.
Bootstrap support for A3LQ29 as seed ortholog is 100%.

Group of orthologs #1912. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:62

B9SK69              	100.00%		A3LRF4              	100.00%
B9S2Z8              	42.53%		
B9RRN6              	38.95%		
Bootstrap support for B9SK69 as seed ortholog is 74%.
Alternative seed ortholog is B9R7Z6 (18 bits away from this cluster)
Bootstrap support for A3LRF4 as seed ortholog is 100%.

Group of orthologs #1913. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9RAE8              	100.00%		A3LQ59              	100.00%
B9RBH1              	100.00%		
Bootstrap support for B9RAE8 as seed ortholog is 100%.
Bootstrap support for B9RBH1 as seed ortholog is 100%.
Bootstrap support for A3LQ59 as seed ortholog is 100%.

Group of orthologs #1914. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9SZF6              	100.00%		A3GHI5              	100.00%
B9SR27              	15.03%		
Bootstrap support for B9SZF6 as seed ortholog is 100%.
Bootstrap support for A3GHI5 as seed ortholog is 100%.

Group of orthologs #1915. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9S8V2              	100.00%		A3GGM1              	100.00%
Bootstrap support for B9S8V2 as seed ortholog is 100%.
Bootstrap support for A3GGM1 as seed ortholog is 100%.

Group of orthologs #1916. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9SEI0              	100.00%		A3LNE5              	100.00%
Bootstrap support for B9SEI0 as seed ortholog is 100%.
Bootstrap support for A3LNE5 as seed ortholog is 100%.

Group of orthologs #1917. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:62 S.stipitis:62

B9SIS5              	100.00%		A3LXG6              	100.00%
Bootstrap support for B9SIS5 as seed ortholog is 100%.
Bootstrap support for A3LXG6 as seed ortholog is 100%.

Group of orthologs #1918. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:13 S.stipitis:62

B9SH87              	100.00%		A3M0D9              	100.00%
Bootstrap support for B9SH87 as seed ortholog is 63%.
Alternative seed ortholog is B9T1Y6 (13 bits away from this cluster)
Bootstrap support for A3M0D9 as seed ortholog is 100%.

Group of orthologs #1919. Best score 62 bits
Score difference with first non-orthologous sequence - R.communis:5 S.stipitis:1

B9T2Z4              	100.00%		A3GGG4              	100.00%
Bootstrap support for B9T2Z4 as seed ortholog is 36%.
Alternative seed ortholog is B9RF36 (5 bits away from this cluster)
Bootstrap support for A3GGG4 as seed ortholog is 43%.
Alternative seed ortholog is A3LRE3 (1 bits away from this cluster)

Group of orthologs #1920. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9RFD7              	100.00%		A3GEU9              	100.00%
B9S689              	100.00%		A3LN56              	95.39%
B9SAT9              	60.39%		
B9SAT8              	59.08%		
B9RT84              	58.43%		
B9RZ61              	27.57%		
B9RW25              	26.41%		
B9RW24              	26.41%		
B9RZ60              	16.45%		
Bootstrap support for B9RFD7 as seed ortholog is 100%.
Bootstrap support for B9S689 as seed ortholog is 100%.
Bootstrap support for A3GEU9 as seed ortholog is 100%.

Group of orthologs #1921. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:15 S.stipitis:4

B9RM68              	100.00%		A3LZ31              	100.00%
B9ST96              	48.94%		
B9RW41              	40.53%		
B9SL27              	34.26%		
B9RFF2              	29.04%		
B9RTA6              	28.83%		
B9RRV1              	25.64%		
B9RSV0              	5.85%		
Bootstrap support for B9RM68 as seed ortholog is 61%.
Alternative seed ortholog is B9RJK7 (15 bits away from this cluster)
Bootstrap support for A3LZ31 as seed ortholog is 47%.
Alternative seed ortholog is A3LY26 (4 bits away from this cluster)

Group of orthologs #1922. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9RJ54              	100.00%		A3M0N0              	100.00%
B9RJ52              	64.42%		
Bootstrap support for B9RJ54 as seed ortholog is 100%.
Bootstrap support for A3M0N0 as seed ortholog is 100%.

Group of orthologs #1923. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9RXI3              	100.00%		A3LNF4              	100.00%
B9SS50              	60.95%		
Bootstrap support for B9RXI3 as seed ortholog is 100%.
Bootstrap support for A3LNF4 as seed ortholog is 100%.

Group of orthologs #1924. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9RGP0              	100.00%		A3GGN8              	100.00%
Bootstrap support for B9RGP0 as seed ortholog is 100%.
Bootstrap support for A3GGN8 as seed ortholog is 100%.

Group of orthologs #1925. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9RAJ5              	100.00%		A3LVX0              	100.00%
Bootstrap support for B9RAJ5 as seed ortholog is 100%.
Bootstrap support for A3LVX0 as seed ortholog is 100%.

Group of orthologs #1926. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9S7M1              	100.00%		A3LN22              	100.00%
Bootstrap support for B9S7M1 as seed ortholog is 100%.
Bootstrap support for A3LN22 as seed ortholog is 100%.

Group of orthologs #1927. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9SB86              	100.00%		A3LPW3              	100.00%
Bootstrap support for B9SB86 as seed ortholog is 100%.
Bootstrap support for A3LPW3 as seed ortholog is 100%.

Group of orthologs #1928. Best score 61 bits
Score difference with first non-orthologous sequence - R.communis:61 S.stipitis:61

B9SYG0              	100.00%		A3LNM3              	100.00%
Bootstrap support for B9SYG0 as seed ortholog is 100%.
Bootstrap support for A3LNM3 as seed ortholog is 100%.

Group of orthologs #1929. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:8

B9TDA7              	100.00%		A3LWY8              	100.00%
                    	       		A3LWY9              	83.06%
                    	       		A3GGI3              	40.32%
                    	       		A3LWL3              	40.23%
                    	       		A3LZ62              	39.25%
                    	       		A3LRQ3              	37.81%
                    	       		A3LZ63              	36.02%
                    	       		A3LWM0              	19.18%
                    	       		A3GH09              	12.46%
                    	       		A3GH02              	10.66%
                    	       		A3LRH1              	9.32%
                    	       		A3LZP4              	5.38%
                    	       		A3LTM9              	5.02%
Bootstrap support for B9TDA7 as seed ortholog is 100%.
Bootstrap support for A3LWY8 as seed ortholog is 41%.
Alternative seed ortholog is A3LVE6 (8 bits away from this cluster)

Group of orthologs #1930. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:60

B9RED0              	100.00%		A3LRK2              	100.00%
B9SNQ0              	30.57%		
B9RLM4              	29.06%		
B9T3B3              	21.64%		
B9SKM6              	10.87%		
B9SQT0              	9.90%		
Bootstrap support for B9RED0 as seed ortholog is 100%.
Bootstrap support for A3LRK2 as seed ortholog is 100%.

Group of orthologs #1931. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:60

B9RF21              	100.00%		A3LMU9              	100.00%
B9RQQ2              	100.00%		
Bootstrap support for B9RF21 as seed ortholog is 100%.
Bootstrap support for B9RQQ2 as seed ortholog is 100%.
Bootstrap support for A3LMU9 as seed ortholog is 100%.

Group of orthologs #1932. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:4 S.stipitis:60

B9RT08              	100.00%		A3GG80              	100.00%
Bootstrap support for B9RT08 as seed ortholog is 55%.
Alternative seed ortholog is B9SGK8 (4 bits away from this cluster)
Bootstrap support for A3GG80 as seed ortholog is 100%.

Group of orthologs #1933. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:60

B9S3L7              	100.00%		A3LQG8              	100.00%
Bootstrap support for B9S3L7 as seed ortholog is 100%.
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #1934. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:60 S.stipitis:60

B9SD29              	100.00%		A3LVA6              	100.00%
Bootstrap support for B9SD29 as seed ortholog is 100%.
Bootstrap support for A3LVA6 as seed ortholog is 100%.

Group of orthologs #1935. Best score 60 bits
Score difference with first non-orthologous sequence - R.communis:18 S.stipitis:60

B9SHC8              	100.00%		A3LZ05              	100.00%
Bootstrap support for B9SHC8 as seed ortholog is 65%.
Alternative seed ortholog is B9T2D7 (18 bits away from this cluster)
Bootstrap support for A3LZ05 as seed ortholog is 100%.

Group of orthologs #1936. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9S9N2              	100.00%		A3LNZ6              	100.00%
B9RG34              	48.11%		
B9RGT3              	47.22%		
B9RXQ9              	41.47%		
B9S507              	39.14%		
B9S7W0              	35.91%		
B9T175              	34.29%		
B9RWF7              	32.85%		
B9SCJ0              	24.78%		
B9S0F2              	23.70%		
B9RZ21              	23.16%		
B9SNH8              	21.36%		
B9SVE3              	20.83%		
Bootstrap support for B9S9N2 as seed ortholog is 100%.
Bootstrap support for A3LNZ6 as seed ortholog is 100%.

Group of orthologs #1937. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9SE10              	100.00%		A3LPH0              	100.00%
B9SV49              	31.34%		
B9SMU6              	8.99%		
B9RNY1              	8.99%		
Bootstrap support for B9SE10 as seed ortholog is 100%.
Bootstrap support for A3LPH0 as seed ortholog is 100%.

Group of orthologs #1938. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9SVY8              	100.00%		A3LQT4              	100.00%
B9SVY9              	47.89%		
Bootstrap support for B9SVY8 as seed ortholog is 100%.
Bootstrap support for A3LQT4 as seed ortholog is 100%.

Group of orthologs #1939. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9TCJ3              	100.00%		A3LUG9              	100.00%
                    	       		A3LZY3              	7.48%
Bootstrap support for B9TCJ3 as seed ortholog is 100%.
Bootstrap support for A3LUG9 as seed ortholog is 100%.

Group of orthologs #1940. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9REU3              	100.00%		A3LX70              	100.00%
Bootstrap support for B9REU3 as seed ortholog is 100%.
Bootstrap support for A3LX70 as seed ortholog is 100%.

Group of orthologs #1941. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9RSX2              	100.00%		A3LQZ5              	100.00%
Bootstrap support for B9RSX2 as seed ortholog is 100%.
Bootstrap support for A3LQZ5 as seed ortholog is 100%.

Group of orthologs #1942. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:7

B9S386              	100.00%		A3GG97              	100.00%
Bootstrap support for B9S386 as seed ortholog is 100%.
Bootstrap support for A3GG97 as seed ortholog is 67%.
Alternative seed ortholog is A3GGM9 (7 bits away from this cluster)

Group of orthologs #1943. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9SQ78              	100.00%		A3LMV9              	100.00%
Bootstrap support for B9SQ78 as seed ortholog is 100%.
Bootstrap support for A3LMV9 as seed ortholog is 100%.

Group of orthologs #1944. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9SSL9              	100.00%		A3LQS0              	100.00%
Bootstrap support for B9SSL9 as seed ortholog is 100%.
Bootstrap support for A3LQS0 as seed ortholog is 100%.

Group of orthologs #1945. Best score 59 bits
Score difference with first non-orthologous sequence - R.communis:59 S.stipitis:59

B9SWP5              	100.00%		A3LXY7              	100.00%
Bootstrap support for B9SWP5 as seed ortholog is 100%.
Bootstrap support for A3LXY7 as seed ortholog is 100%.

Group of orthologs #1946. Best score 58 bits
Score difference with first non-orthologous sequence - R.communis:3 S.stipitis:58

B9S448              	100.00%		A3LNY0              	100.00%
B9S449              	72.49%		
Bootstrap support for B9S448 as seed ortholog is 69%.
Alternative seed ortholog is B9TBP1 (3 bits away from this cluster)
Bootstrap support for A3LNY0 as seed ortholog is 100%.

Group of orthologs #1947. Best score 58 bits
Score difference with first non-orthologous sequence - R.communis:58 S.stipitis:58

B9S8M2              	100.00%		A3LPP2              	100.00%
Bootstrap support for B9S8M2 as seed ortholog is 100%.
Bootstrap support for A3LPP2 as seed ortholog is 100%.

Group of orthologs #1948. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:12 S.stipitis:57

B9TF28              	100.00%		A3LUR5              	100.00%
                    	       		A3LUR4              	72.73%
                    	       		A3GHD8              	57.49%
                    	       		A3M0J7              	18.54%
                    	       		A3LZ26              	17.02%
                    	       		A3LTP7              	16.93%
                    	       		A3GHS8              	16.76%
                    	       		A3LT56              	15.86%
                    	       		A3LWM5              	15.33%
                    	       		A3LV42              	15.15%
                    	       		A3LRY3              	14.35%
                    	       		A3M0B3              	14.17%
                    	       		A3LV01              	9.27%
                    	       		A3LRD5              	9.00%
                    	       		A3LSP7              	5.08%
Bootstrap support for B9TF28 as seed ortholog is 60%.
Alternative seed ortholog is B9S6D9 (12 bits away from this cluster)
Bootstrap support for A3LUR5 as seed ortholog is 100%.

Group of orthologs #1949. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9RDN7              	100.00%		A3LS72              	100.00%
B9R767              	7.01%		
B9RLJ0              	5.71%		
Bootstrap support for B9RDN7 as seed ortholog is 100%.
Bootstrap support for A3LS72 as seed ortholog is 100%.

Group of orthologs #1950. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9RAY4              	100.00%		A3LS54              	100.00%
B9RYS0              	25.24%		
Bootstrap support for B9RAY4 as seed ortholog is 100%.
Bootstrap support for A3LS54 as seed ortholog is 100%.

Group of orthologs #1951. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9RD56              	100.00%		A3M0I0              	100.00%
B9SK56              	30.39%		
Bootstrap support for B9RD56 as seed ortholog is 100%.
Bootstrap support for A3M0I0 as seed ortholog is 100%.

Group of orthologs #1952. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9R7C0              	100.00%		A3LVC0              	100.00%
Bootstrap support for B9R7C0 as seed ortholog is 100%.
Bootstrap support for A3LVC0 as seed ortholog is 100%.

Group of orthologs #1953. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9RAX8              	100.00%		A3LY14              	100.00%
Bootstrap support for B9RAX8 as seed ortholog is 100%.
Bootstrap support for A3LY14 as seed ortholog is 100%.

Group of orthologs #1954. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9RTR3              	100.00%		A3GFN1              	100.00%
Bootstrap support for B9RTR3 as seed ortholog is 100%.
Bootstrap support for A3GFN1 as seed ortholog is 100%.

Group of orthologs #1955. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9RZS6              	100.00%		A3GIA9              	100.00%
Bootstrap support for B9RZS6 as seed ortholog is 100%.
Bootstrap support for A3GIA9 as seed ortholog is 100%.

Group of orthologs #1956. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9SMZ8              	100.00%		A3LQ07              	100.00%
Bootstrap support for B9SMZ8 as seed ortholog is 100%.
Bootstrap support for A3LQ07 as seed ortholog is 100%.

Group of orthologs #1957. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9STR0              	100.00%		A3GFM7              	100.00%
Bootstrap support for B9STR0 as seed ortholog is 100%.
Bootstrap support for A3GFM7 as seed ortholog is 100%.

Group of orthologs #1958. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9SWV4              	100.00%		A3GG96              	100.00%
Bootstrap support for B9SWV4 as seed ortholog is 100%.
Bootstrap support for A3GG96 as seed ortholog is 100%.

Group of orthologs #1959. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9SU93              	100.00%		A3LWU5              	100.00%
Bootstrap support for B9SU93 as seed ortholog is 100%.
Bootstrap support for A3LWU5 as seed ortholog is 100%.

Group of orthologs #1960. Best score 57 bits
Score difference with first non-orthologous sequence - R.communis:57 S.stipitis:57

B9TA32              	100.00%		A3GHB8              	100.00%
Bootstrap support for B9TA32 as seed ortholog is 100%.
Bootstrap support for A3GHB8 as seed ortholog is 100%.

Group of orthologs #1961. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9SKA4              	100.00%		A3LWF0              	100.00%
B9RLK4              	21.55%		
B9RDH6              	21.26%		
B9R9J1              	19.25%		
B9RX62              	19.25%		
B9SMY1              	18.97%		
B9RIY4              	17.82%		
B9S2T9              	14.37%		
B9T4Y6              	10.63%		
B9R8X9              	8.91%		
B9R740              	8.62%		
B9RJF3              	6.03%		
B9S143              	6.03%		
B9T6Y7              	5.17%		
Bootstrap support for B9SKA4 as seed ortholog is 100%.
Bootstrap support for A3LWF0 as seed ortholog is 100%.

Group of orthologs #1962. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9R972              	100.00%		A3LS23              	100.00%
B9R971              	13.27%		
B9R973              	13.01%		
B9RLF7              	10.20%		
B9RJ35              	9.95%		
Bootstrap support for B9R972 as seed ortholog is 100%.
Bootstrap support for A3LS23 as seed ortholog is 100%.

Group of orthologs #1963. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9RX49              	100.00%		A3GI87              	100.00%
B9SMX1              	55.31%		A3LR31              	18.36%
B9SE14              	32.97%		A3LQ75              	13.86%
Bootstrap support for B9RX49 as seed ortholog is 100%.
Bootstrap support for A3GI87 as seed ortholog is 100%.

Group of orthologs #1964. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9SDL0              	100.00%		A3M0G4              	100.00%
B9RQ54              	32.06%		
Bootstrap support for B9SDL0 as seed ortholog is 100%.
Bootstrap support for A3M0G4 as seed ortholog is 100%.

Group of orthologs #1965. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9TL62              	100.00%		A3LSC3              	100.00%
B9SIM7              	11.61%		
Bootstrap support for B9TL62 as seed ortholog is 100%.
Bootstrap support for A3LSC3 as seed ortholog is 100%.

Group of orthologs #1966. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9RBP4              	100.00%		A3M002              	100.00%
Bootstrap support for B9RBP4 as seed ortholog is 100%.
Bootstrap support for A3M002 as seed ortholog is 100%.

Group of orthologs #1967. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9SHL3              	100.00%		A3GI44              	100.00%
Bootstrap support for B9SHL3 as seed ortholog is 100%.
Bootstrap support for A3GI44 as seed ortholog is 100%.

Group of orthologs #1968. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9SPF4              	100.00%		A3LPQ8              	100.00%
Bootstrap support for B9SPF4 as seed ortholog is 100%.
Bootstrap support for A3LPQ8 as seed ortholog is 100%.

Group of orthologs #1969. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9T6K3              	100.00%		A3LPB2              	100.00%
Bootstrap support for B9T6K3 as seed ortholog is 100%.
Bootstrap support for A3LPB2 as seed ortholog is 100%.

Group of orthologs #1970. Best score 56 bits
Score difference with first non-orthologous sequence - R.communis:56 S.stipitis:56

B9TFN0              	100.00%		A3LTC5              	100.00%
Bootstrap support for B9TFN0 as seed ortholog is 100%.
Bootstrap support for A3LTC5 as seed ortholog is 100%.

Group of orthologs #1971. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:55

B9SH52              	100.00%		A3GFZ0              	100.00%
B9S9Z2              	20.51%		
B9SLQ3              	11.28%		
B9SCX5              	10.77%		
B9SX10              	9.23%		
B9SDK2              	7.18%		
B9SZB7              	5.13%		
Bootstrap support for B9SH52 as seed ortholog is 100%.
Bootstrap support for A3GFZ0 as seed ortholog is 100%.

Group of orthologs #1972. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:55

B9RKF3              	21.22%		A3GIB6              	100.00%
B9RXN5              	100.00%		A3LVI8              	100.00%
B9T8V1              	19.86%		
Bootstrap support for B9RXN5 as seed ortholog is 100%.
Bootstrap support for A3GIB6 as seed ortholog is 100%.
Bootstrap support for A3LVI8 as seed ortholog is 100%.

Group of orthologs #1973. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:55

B9RRG1              	100.00%		A3GGT2              	100.00%
                    	       		A3GGV1              	8.55%
Bootstrap support for B9RRG1 as seed ortholog is 100%.
Bootstrap support for A3GGT2 as seed ortholog is 100%.

Group of orthologs #1974. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:55

B9R6U9              	100.00%		A3LNT0              	100.00%
Bootstrap support for B9R6U9 as seed ortholog is 100%.
Bootstrap support for A3LNT0 as seed ortholog is 100%.

Group of orthologs #1975. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:55

B9RLS6              	100.00%		A3GF43              	100.00%
Bootstrap support for B9RLS6 as seed ortholog is 100%.
Bootstrap support for A3GF43 as seed ortholog is 100%.

Group of orthologs #1976. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:11 S.stipitis:55

B9T100              	100.00%		A3GG27              	100.00%
Bootstrap support for B9T100 as seed ortholog is 61%.
Alternative seed ortholog is B9SXC4 (11 bits away from this cluster)
Bootstrap support for A3GG27 as seed ortholog is 100%.

Group of orthologs #1977. Best score 55 bits
Score difference with first non-orthologous sequence - R.communis:55 S.stipitis:55

G1D7C2              	100.00%		A3LSJ1              	100.00%
Bootstrap support for G1D7C2 as seed ortholog is 100%.
Bootstrap support for A3LSJ1 as seed ortholog is 100%.

Group of orthologs #1978. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9SZ78              	100.00%		A3LR63              	100.00%
B9SR17              	6.93%		
B9SZF3              	6.65%		
B9SCY0              	5.12%		
Bootstrap support for B9SZ78 as seed ortholog is 100%.
Bootstrap support for A3LR63 as seed ortholog is 100%.

Group of orthologs #1979. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9S761              	100.00%		A3LYG3              	100.00%
B9SUA9              	54.84%		
B9S0M1              	37.42%		
Bootstrap support for B9S761 as seed ortholog is 100%.
Bootstrap support for A3LYG3 as seed ortholog is 100%.

Group of orthologs #1980. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9SRZ4              	100.00%		A3LQU8              	100.00%
B9SX19              	30.97%		A3LPJ3              	17.11%
Bootstrap support for B9SRZ4 as seed ortholog is 100%.
Bootstrap support for A3LQU8 as seed ortholog is 100%.

Group of orthologs #1981. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9S418              	100.00%		A3M0B0              	100.00%
B9RBL6              	12.26%		
Bootstrap support for B9S418 as seed ortholog is 100%.
Bootstrap support for A3M0B0 as seed ortholog is 100%.

Group of orthologs #1982. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:6 S.stipitis:54

B9TA87              	100.00%		A3LMT9              	100.00%
B9TQT2              	33.77%		
Bootstrap support for B9TA87 as seed ortholog is 60%.
Alternative seed ortholog is B9R7F3 (6 bits away from this cluster)
Bootstrap support for A3LMT9 as seed ortholog is 100%.

Group of orthologs #1983. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9RV06              	100.00%		A3LRP0              	100.00%
Bootstrap support for B9RV06 as seed ortholog is 100%.
Bootstrap support for A3LRP0 as seed ortholog is 100%.

Group of orthologs #1984. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9S8K8              	100.00%		A3LQ44              	100.00%
Bootstrap support for B9S8K8 as seed ortholog is 100%.
Bootstrap support for A3LQ44 as seed ortholog is 100%.

Group of orthologs #1985. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:54 S.stipitis:54

B9T1M9              	100.00%		A3GG85              	100.00%
Bootstrap support for B9T1M9 as seed ortholog is 100%.
Bootstrap support for A3GG85 as seed ortholog is 100%.

Group of orthologs #1986. Best score 54 bits
Score difference with first non-orthologous sequence - R.communis:11 S.stipitis:54

B9TBJ1              	100.00%		A3LUQ7              	100.00%
Bootstrap support for B9TBJ1 as seed ortholog is 38%.
Alternative seed ortholog is B9RUW7 (11 bits away from this cluster)
Bootstrap support for A3LUQ7 as seed ortholog is 100%.

Group of orthologs #1987. Best score 53 bits
Score difference with first non-orthologous sequence - R.communis:53 S.stipitis:53

B9RH60              	100.00%		A3LWE5              	100.00%
B9R7W5              	58.51%		A3LWE6              	89.37%
B9SYI6              	56.16%		A3LWE3              	86.57%
B9RH58              	37.38%		A3LWE4              	81.53%
B9S1I5              	36.99%		A3LWE7              	57.09%
B9SX28              	36.99%		
B9S1I6              	35.62%		
B9SEI5              	26.61%		
Bootstrap support for B9RH60 as seed ortholog is 100%.
Bootstrap support for A3LWE5 as seed ortholog is 100%.

Group of orthologs #1988. Best score 53 bits
Score difference with first non-orthologous sequence - R.communis:53 S.stipitis:53

B9RDT7              	100.00%		A3LPB8              	100.00%
Bootstrap support for B9RDT7 as seed ortholog is 100%.
Bootstrap support for A3LPB8 as seed ortholog is 100%.

Group of orthologs #1989. Best score 53 bits
Score difference with first non-orthologous sequence - R.communis:53 S.stipitis:53

B9S6N4              	100.00%		A3LNQ3              	100.00%
Bootstrap support for B9S6N4 as seed ortholog is 100%.
Bootstrap support for A3LNQ3 as seed ortholog is 100%.

Group of orthologs #1990. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9RD59              	100.00%		A3LR38              	100.00%
B9RA01              	26.58%		A3LQE4              	32.91%
B9RPQ9              	24.81%		
B9S423              	24.05%		
B9SKL0              	24.05%		
B9RF55              	23.54%		
Bootstrap support for B9RD59 as seed ortholog is 100%.
Bootstrap support for A3LR38 as seed ortholog is 100%.

Group of orthologs #1991. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:5 S.stipitis:52

B9RFG7              	100.00%		A3LT04              	100.00%
B9SAW5              	32.99%		
B9SJ43              	27.43%		
B9ST58              	19.10%		
Bootstrap support for B9RFG7 as seed ortholog is 57%.
Alternative seed ortholog is B9SSK0 (5 bits away from this cluster)
Bootstrap support for A3LT04 as seed ortholog is 100%.

Group of orthologs #1992. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9SH21              	100.00%		A3LR87              	100.00%
B9RI53              	51.98%		
B9RLV1              	29.07%		
B9RT50              	27.86%		
Bootstrap support for B9SH21 as seed ortholog is 100%.
Bootstrap support for A3LR87 as seed ortholog is 100%.

Group of orthologs #1993. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9RC85              	100.00%		A3LZ85              	100.00%
Bootstrap support for B9RC85 as seed ortholog is 100%.
Bootstrap support for A3LZ85 as seed ortholog is 100%.

Group of orthologs #1994. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:10 S.stipitis:52

B9REC1              	100.00%		A3LXE9              	100.00%
Bootstrap support for B9REC1 as seed ortholog is 63%.
Alternative seed ortholog is B9STM8 (10 bits away from this cluster)
Bootstrap support for A3LXE9 as seed ortholog is 100%.

Group of orthologs #1995. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9RXP2              	100.00%		A3LTQ1              	100.00%
Bootstrap support for B9RXP2 as seed ortholog is 100%.
Bootstrap support for A3LTQ1 as seed ortholog is 100%.

Group of orthologs #1996. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9S0S4              	100.00%		A3M0C6              	100.00%
Bootstrap support for B9S0S4 as seed ortholog is 100%.
Bootstrap support for A3M0C6 as seed ortholog is 100%.

Group of orthologs #1997. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9S9I9              	100.00%		A3LZY9              	100.00%
Bootstrap support for B9S9I9 as seed ortholog is 100%.
Bootstrap support for A3LZY9 as seed ortholog is 100%.

Group of orthologs #1998. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9SLS3              	100.00%		A3LR77              	100.00%
Bootstrap support for B9SLS3 as seed ortholog is 100%.
Bootstrap support for A3LR77 as seed ortholog is 100%.

Group of orthologs #1999. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9SQC3              	100.00%		A3LSN4              	100.00%
Bootstrap support for B9SQC3 as seed ortholog is 100%.
Bootstrap support for A3LSN4 as seed ortholog is 100%.

Group of orthologs #2000. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9T387              	100.00%		A3GH52              	100.00%
Bootstrap support for B9T387 as seed ortholog is 100%.
Bootstrap support for A3GH52 as seed ortholog is 100%.

Group of orthologs #2001. Best score 52 bits
Score difference with first non-orthologous sequence - R.communis:52 S.stipitis:52

B9SWX4              	100.00%		A3LVG3              	100.00%
Bootstrap support for B9SWX4 as seed ortholog is 100%.
Bootstrap support for A3LVG3 as seed ortholog is 100%.

Group of orthologs #2002. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9S7P5              	100.00%		A3LU87              	100.00%
B9SGB4              	19.64%		
Bootstrap support for B9S7P5 as seed ortholog is 100%.
Bootstrap support for A3LU87 as seed ortholog is 100%.

Group of orthologs #2003. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9SCI5              	100.00%		A3LUL2              	100.00%
B9RVS7              	13.21%		
Bootstrap support for B9SCI5 as seed ortholog is 100%.
Bootstrap support for A3LUL2 as seed ortholog is 100%.

Group of orthologs #2004. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9SHY1              	100.00%		A3LWF5              	100.00%
B9RXF3              	10.94%		
Bootstrap support for B9SHY1 as seed ortholog is 100%.
Bootstrap support for A3LWF5 as seed ortholog is 100%.

Group of orthologs #2005. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9RA67              	100.00%		A3GI04              	100.00%
Bootstrap support for B9RA67 as seed ortholog is 100%.
Bootstrap support for A3GI04 as seed ortholog is 100%.

Group of orthologs #2006. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9S202              	100.00%		A3LUH8              	100.00%
Bootstrap support for B9S202 as seed ortholog is 100%.
Bootstrap support for A3LUH8 as seed ortholog is 100%.

Group of orthologs #2007. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9SX57              	100.00%		A3GHP7              	100.00%
Bootstrap support for B9SX57 as seed ortholog is 100%.
Bootstrap support for A3GHP7 as seed ortholog is 100%.

Group of orthologs #2008. Best score 51 bits
Score difference with first non-orthologous sequence - R.communis:51 S.stipitis:51

B9T3L6              	100.00%		A3LPC7              	100.00%
Bootstrap support for B9T3L6 as seed ortholog is 100%.
Bootstrap support for A3LPC7 as seed ortholog is 100%.

Group of orthologs #2009. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9TDA5              	100.00%		A3LPQ4              	100.00%
                    	       		A3LQJ6              	41.59%
                    	       		A3LZP0              	41.25%
                    	       		A3LUM2              	32.27%
                    	       		A3GGF8              	24.20%
                    	       		A3LND2              	6.14%
                    	       		A3LVF0              	5.91%
                    	       		A3LWR1              	5.57%
Bootstrap support for B9TDA5 as seed ortholog is 100%.
Bootstrap support for A3LPQ4 as seed ortholog is 100%.

Group of orthologs #2010. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9T2E8              	100.00%		A3LSQ3              	100.00%
B9T2E9              	71.62%		
B9T2F0              	45.87%		
B9T2F3              	41.91%		
B9T7D4              	38.61%		
B9R6T3              	11.55%		
Bootstrap support for B9T2E8 as seed ortholog is 100%.
Bootstrap support for A3LSQ3 as seed ortholog is 100%.

Group of orthologs #2011. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9S228              	100.00%		A3LVR4              	100.00%
B9SRC6              	67.53%		
B9SIA2              	36.15%		
B9S290              	27.27%		
B9RUQ0              	21.21%		
Bootstrap support for B9S228 as seed ortholog is 100%.
Bootstrap support for A3LVR4 as seed ortholog is 100%.

Group of orthologs #2012. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9RSC8              	100.00%		A3LMT0              	100.00%
B9T3V4              	19.42%		
Bootstrap support for B9RSC8 as seed ortholog is 100%.
Bootstrap support for A3LMT0 as seed ortholog is 100%.

Group of orthologs #2013. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9RR93              	100.00%		A3LQE9              	100.00%
B9RQY6              	47.46%		
Bootstrap support for B9RR93 as seed ortholog is 100%.
Bootstrap support for A3LQE9 as seed ortholog is 100%.

Group of orthologs #2014. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9RE89              	100.00%		A3GEY8              	100.00%
Bootstrap support for B9RE89 as seed ortholog is 100%.
Bootstrap support for A3GEY8 as seed ortholog is 100%.

Group of orthologs #2015. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9RIC9              	100.00%		A3LXK7              	100.00%
Bootstrap support for B9RIC9 as seed ortholog is 100%.
Bootstrap support for A3LXK7 as seed ortholog is 100%.

Group of orthologs #2016. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9SAR4              	100.00%		A3LNG8              	100.00%
Bootstrap support for B9SAR4 as seed ortholog is 100%.
Bootstrap support for A3LNG8 as seed ortholog is 100%.

Group of orthologs #2017. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9SAQ7              	100.00%		A3LSH9              	100.00%
Bootstrap support for B9SAQ7 as seed ortholog is 100%.
Bootstrap support for A3LSH9 as seed ortholog is 100%.

Group of orthologs #2018. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9T667              	100.00%		A3GGD1              	100.00%
Bootstrap support for B9T667 as seed ortholog is 100%.
Bootstrap support for A3GGD1 as seed ortholog is 100%.

Group of orthologs #2019. Best score 50 bits
Score difference with first non-orthologous sequence - R.communis:50 S.stipitis:50

B9TPT8              	100.00%		A3LYD1              	100.00%
Bootstrap support for B9TPT8 as seed ortholog is 100%.
Bootstrap support for A3LYD1 as seed ortholog is 100%.

Group of orthologs #2020. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9RDT5              	100.00%		A3LMY7              	100.00%
B9SHZ0              	64.72%		A3LP70              	11.69%
B9SPE0              	28.35%		A3LQL2              	8.72%
B9S364              	26.73%		A3M085              	6.23%
B9T601              	26.37%		
B9SVU4              	22.41%		
Bootstrap support for B9RDT5 as seed ortholog is 100%.
Bootstrap support for A3LMY7 as seed ortholog is 100%.

Group of orthologs #2021. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9S459              	100.00%		A3LV80              	100.00%
                    	       		A3LUP9              	54.00%
                    	       		A3LV81              	47.75%
Bootstrap support for B9S459 as seed ortholog is 100%.
Bootstrap support for A3LV80 as seed ortholog is 100%.

Group of orthologs #2022. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9RBN6              	100.00%		A3GG18              	100.00%
Bootstrap support for B9RBN6 as seed ortholog is 100%.
Bootstrap support for A3GG18 as seed ortholog is 100%.

Group of orthologs #2023. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9RIP0              	100.00%		A3LP22              	100.00%
Bootstrap support for B9RIP0 as seed ortholog is 100%.
Bootstrap support for A3LP22 as seed ortholog is 100%.

Group of orthologs #2024. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9RHJ9              	100.00%		A3LUC3              	100.00%
Bootstrap support for B9RHJ9 as seed ortholog is 100%.
Bootstrap support for A3LUC3 as seed ortholog is 100%.

Group of orthologs #2025. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9RE05              	100.00%		A3LYN3              	100.00%
Bootstrap support for B9RE05 as seed ortholog is 100%.
Bootstrap support for A3LYN3 as seed ortholog is 100%.

Group of orthologs #2026. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9RW61              	100.00%		A3LPB6              	100.00%
Bootstrap support for B9RW61 as seed ortholog is 100%.
Bootstrap support for A3LPB6 as seed ortholog is 100%.

Group of orthologs #2027. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9S7B4              	100.00%		A3LPJ0              	100.00%
Bootstrap support for B9S7B4 as seed ortholog is 100%.
Bootstrap support for A3LPJ0 as seed ortholog is 100%.

Group of orthologs #2028. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9SEV5              	100.00%		A3GFT5              	100.00%
Bootstrap support for B9SEV5 as seed ortholog is 100%.
Bootstrap support for A3GFT5 as seed ortholog is 100%.

Group of orthologs #2029. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9S3C4              	100.00%		A3LXC0              	100.00%
Bootstrap support for B9S3C4 as seed ortholog is 100%.
Bootstrap support for A3LXC0 as seed ortholog is 100%.

Group of orthologs #2030. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9SBA4              	100.00%		A3LQ12              	100.00%
Bootstrap support for B9SBA4 as seed ortholog is 100%.
Bootstrap support for A3LQ12 as seed ortholog is 100%.

Group of orthologs #2031. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9SQQ8              	100.00%		A3LPW8              	100.00%
Bootstrap support for B9SQQ8 as seed ortholog is 100%.
Bootstrap support for A3LPW8 as seed ortholog is 100%.

Group of orthologs #2032. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9SM97              	100.00%		A3M0I1              	100.00%
Bootstrap support for B9SM97 as seed ortholog is 100%.
Bootstrap support for A3M0I1 as seed ortholog is 100%.

Group of orthologs #2033. Best score 49 bits
Score difference with first non-orthologous sequence - R.communis:49 S.stipitis:49

B9T5X5              	100.00%		A3GHX3              	100.00%
Bootstrap support for B9T5X5 as seed ortholog is 100%.
Bootstrap support for A3GHX3 as seed ortholog is 100%.

Group of orthologs #2034. Best score 48 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:48

B9STT9              	100.00%		A3LZ75              	100.00%
B9RFR7              	23.68%		
Bootstrap support for B9STT9 as seed ortholog is 100%.
Bootstrap support for A3LZ75 as seed ortholog is 100%.

Group of orthologs #2035. Best score 48 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:48

B9RIS1              	100.00%		A3LRY6              	100.00%
Bootstrap support for B9RIS1 as seed ortholog is 100%.
Bootstrap support for A3LRY6 as seed ortholog is 100%.

Group of orthologs #2036. Best score 48 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:48

B9RZA9              	100.00%		A3LZR9              	100.00%
Bootstrap support for B9RZA9 as seed ortholog is 100%.
Bootstrap support for A3LZR9 as seed ortholog is 100%.

Group of orthologs #2037. Best score 48 bits
Score difference with first non-orthologous sequence - R.communis:48 S.stipitis:48

B9SNE7              	100.00%		A3GGV5              	100.00%
Bootstrap support for B9SNE7 as seed ortholog is 100%.
Bootstrap support for A3GGV5 as seed ortholog is 100%.

Group of orthologs #2038. Best score 47 bits
Score difference with first non-orthologous sequence - R.communis:2 S.stipitis:47

B9SYP1              	100.00%		A3GEX2              	100.00%
B9STH4              	13.59%		
B9SAU1              	10.87%		
B9S5S5              	10.05%		
B9SLG5              	9.24%		
B9S4E7              	8.42%		
B9RDK3              	8.42%		
B9T2K4              	8.15%		
B9SQP8              	7.88%		
B9SP11              	7.61%		
B9T0S4              	7.34%		
B9SRS1              	7.34%		
B9R8S1              	7.07%		
B9SP12              	7.07%		
B9S962              	6.79%		
B9SDK9              	5.98%		
B9T5A0              	5.98%		
B9RL11              	5.43%		
Bootstrap support for B9SYP1 as seed ortholog is 53%.
Alternative seed ortholog is B9T6R0 (2 bits away from this cluster)
Bootstrap support for A3GEX2 as seed ortholog is 100%.

Group of orthologs #2039. Best score 47 bits
Score difference with first non-orthologous sequence - R.communis:47 S.stipitis:47

B9RS01              	100.00%		A3LRT0              	100.00%
B9S5Y4              	19.21%		
B9T6U9              	17.73%		
B9SAR9              	16.01%		
B9S5F4              	14.78%		
B9S5F5              	14.04%		
B9T8E7              	10.59%		
B9SUB1              	7.39%		
B9SB28              	6.40%		
Bootstrap support for B9RS01 as seed ortholog is 100%.
Bootstrap support for A3LRT0 as seed ortholog is 100%.

Group of orthologs #2040. Best score 47 bits
Score difference with first non-orthologous sequence - R.communis:47 S.stipitis:47

B9T0E6              	100.00%		A3LN19              	100.00%
Bootstrap support for B9T0E6 as seed ortholog is 100%.
Bootstrap support for A3LN19 as seed ortholog is 100%.

Group of orthologs #2041. Best score 46 bits
Score difference with first non-orthologous sequence - R.communis:46 S.stipitis:46

B9SXL0              	100.00%		A3LP94              	100.00%
Bootstrap support for B9SXL0 as seed ortholog is 100%.
Bootstrap support for A3LP94 as seed ortholog is 100%.

Group of orthologs #2042. Best score 45 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:45

B9REP3              	100.00%		A3LU14              	100.00%
B9RPF8              	29.51%		
B9R7B6              	29.15%		
B9SCS5              	19.96%		
B9RJD4              	19.43%		
B9SRW9              	14.84%		
B9SE72              	8.30%		
Bootstrap support for B9REP3 as seed ortholog is 100%.
Bootstrap support for A3LU14 as seed ortholog is 100%.

Group of orthologs #2043. Best score 45 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:45

B9SSC9              	100.00%		A3LXB9              	100.00%
B9RX39              	59.74%		
Bootstrap support for B9SSC9 as seed ortholog is 100%.
Bootstrap support for A3LXB9 as seed ortholog is 100%.

Group of orthologs #2044. Best score 45 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:45

B9RGM5              	100.00%		A3GFJ3              	100.00%
Bootstrap support for B9RGM5 as seed ortholog is 100%.
Bootstrap support for A3GFJ3 as seed ortholog is 100%.

Group of orthologs #2045. Best score 45 bits
Score difference with first non-orthologous sequence - R.communis:45 S.stipitis:45

B9SKI3              	100.00%		A3M0K8              	100.00%
Bootstrap support for B9SKI3 as seed ortholog is 100%.
Bootstrap support for A3M0K8 as seed ortholog is 100%.

Group of orthologs #2046. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:44

B9SPW6              	100.00%		A3LRU8              	100.00%
B9SWH4              	20.27%		A3LNC5              	17.28%
Bootstrap support for B9SPW6 as seed ortholog is 100%.
Bootstrap support for A3LRU8 as seed ortholog is 100%.

Group of orthologs #2047. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:44

B9TLE8              	100.00%		A3LMT6              	100.00%
B9RPN7              	18.04%		
B9S1A8              	10.98%		
Bootstrap support for B9TLE8 as seed ortholog is 100%.
Bootstrap support for A3LMT6 as seed ortholog is 100%.

Group of orthologs #2048. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:0 S.stipitis:44

B9S594              	100.00%		A3LR51              	100.00%
B9SH82              	60.84%		
Bootstrap support for B9S594 as seed ortholog is 53%.
Alternative seed ortholog is B9S0W9 (0 bits away from this cluster)
Bootstrap support for A3LR51 as seed ortholog is 100%.

Group of orthologs #2049. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:44

B9RG74              	100.00%		A3LX41              	100.00%
Bootstrap support for B9RG74 as seed ortholog is 100%.
Bootstrap support for A3LX41 as seed ortholog is 100%.

Group of orthologs #2050. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:44

B9S208              	100.00%		A3LTY2              	100.00%
Bootstrap support for B9S208 as seed ortholog is 100%.
Bootstrap support for A3LTY2 as seed ortholog is 100%.

Group of orthologs #2051. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:44

B9SC93              	100.00%		A3LPI5              	100.00%
Bootstrap support for B9SC93 as seed ortholog is 100%.
Bootstrap support for A3LPI5 as seed ortholog is 100%.

Group of orthologs #2052. Best score 44 bits
Score difference with first non-orthologous sequence - R.communis:44 S.stipitis:44

B9SYL9              	100.00%		A3LXF5              	100.00%
Bootstrap support for B9SYL9 as seed ortholog is 100%.
Bootstrap support for A3LXF5 as seed ortholog is 100%.

Group of orthologs #2053. Best score 43 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:43

B9T0B8              	100.00%		A3LUR7              	100.00%
B9SY56              	55.89%		
Bootstrap support for B9T0B8 as seed ortholog is 100%.
Bootstrap support for A3LUR7 as seed ortholog is 100%.

Group of orthologs #2054. Best score 43 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:43

B9SCC3              	100.00%		A3GG55              	100.00%
Bootstrap support for B9SCC3 as seed ortholog is 100%.
Bootstrap support for A3GG55 as seed ortholog is 100%.

Group of orthologs #2055. Best score 43 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:43

B9S0Y0              	100.00%		A3LX11              	100.00%
Bootstrap support for B9S0Y0 as seed ortholog is 100%.
Bootstrap support for A3LX11 as seed ortholog is 100%.

Group of orthologs #2056. Best score 43 bits
Score difference with first non-orthologous sequence - R.communis:43 S.stipitis:43

B9SQ69              	100.00%		A3GFK4              	100.00%
Bootstrap support for B9SQ69 as seed ortholog is 100%.
Bootstrap support for A3GFK4 as seed ortholog is 100%.

Group of orthologs #2057. Best score 42 bits
Score difference with first non-orthologous sequence - R.communis:42 S.stipitis:42

B9RJ93              	100.00%		A3LR99              	100.00%
B9RIF9              	41.36%		A3LW55              	40.42%
B9S8N8              	39.39%		A3LVG9              	24.78%
B9RKF7              	33.64%		A3GGJ9              	9.49%
B9SH66              	31.97%		
B9SU04              	31.21%		
B9SCU1              	28.79%		
B9T103              	28.48%		
B9RYW1              	28.03%		
B9SP53              	28.03%		
B9RV65              	28.03%		
B9RBE5              	27.42%		
B9R7T0              	27.12%		
B9SXY3              	26.97%		
B9R8R1              	26.97%		
B9S3Q3              	26.67%		
B9S109              	26.52%		
B9SHA1              	25.91%		
B9R9A4              	25.30%		
B9RXJ9              	25.30%		
B9T3M9              	25.15%		
B9SJT3              	23.94%		
B9T6M9              	23.79%		
B9SPT8              	23.64%		
B9SXY4              	23.48%		
B9SWK2              	23.03%		
B9T7Y8              	22.58%		
B9SGA7              	22.42%		
B9RPA4              	21.36%		
B9SW88              	20.61%		
B9RR12              	19.39%		
B9SHH6              	18.33%		
B9SWP3              	17.58%		
B9T1E3              	16.97%		
B9RPN4              	6.67%		
Bootstrap support for B9RJ93 as seed ortholog is 100%.
Bootstrap support for A3LR99 as seed ortholog is 100%.

Group of orthologs #2058. Best score 42 bits
Score difference with first non-orthologous sequence - R.communis:42 S.stipitis:42

B9RA51              	100.00%		A3GHR8              	100.00%
Bootstrap support for B9RA51 as seed ortholog is 100%.
Bootstrap support for A3GHR8 as seed ortholog is 100%.

Group of orthologs #2059. Best score 42 bits
Score difference with first non-orthologous sequence - R.communis:42 S.stipitis:42

B9SBX3              	100.00%		A3GI77              	100.00%
Bootstrap support for B9SBX3 as seed ortholog is 100%.
Bootstrap support for A3GI77 as seed ortholog is 100%.

Group of orthologs #2060. Best score 42 bits
Score difference with first non-orthologous sequence - R.communis:42 S.stipitis:42

B9SC98              	100.00%		A3LSC4              	100.00%
Bootstrap support for B9SC98 as seed ortholog is 100%.
Bootstrap support for A3LSC4 as seed ortholog is 100%.

Group of orthologs #2061. Best score 42 bits
Score difference with first non-orthologous sequence - R.communis:42 S.stipitis:42

B9T2U6              	100.00%		A3LVL8              	100.00%
Bootstrap support for B9T2U6 as seed ortholog is 100%.
Bootstrap support for A3LVL8 as seed ortholog is 100%.

Group of orthologs #2062. Best score 41 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:41

B9RUG5              	100.00%		A3LSJ6              	100.00%
Bootstrap support for B9RUG5 as seed ortholog is 100%.
Bootstrap support for A3LSJ6 as seed ortholog is 100%.

Group of orthologs #2063. Best score 41 bits
Score difference with first non-orthologous sequence - R.communis:41 S.stipitis:41

B9SV33              	100.00%		A3LYB9              	100.00%
Bootstrap support for B9SV33 as seed ortholog is 100%.
Bootstrap support for A3LYB9 as seed ortholog is 100%.