###################################
308 groups of orthologs
407 in-paralogs from P.pallidum
334 in-paralogs from T.maritima
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 696 bits
Score difference with first non-orthologous sequence - P.pallidum:480 T.maritima:696

D3BPX3              	100.00%		Q9X2D7              	100.00%
D3BC16              	5.82%		
Bootstrap support for D3BPX3 as seed ortholog is 100%.
Bootstrap support for Q9X2D7 as seed ortholog is 100%.

Group of orthologs #2. Best score 680 bits
Score difference with first non-orthologous sequence - P.pallidum:553 T.maritima:680

D3BE62              	100.00%		Q9WY15              	100.00%
Bootstrap support for D3BE62 as seed ortholog is 100%.
Bootstrap support for Q9WY15 as seed ortholog is 100%.

Group of orthologs #3. Best score 679 bits
Score difference with first non-orthologous sequence - P.pallidum:310 T.maritima:679

D3B8D9              	100.00%		P46213              	100.00%
Bootstrap support for D3B8D9 as seed ortholog is 99%.
Bootstrap support for P46213 as seed ortholog is 100%.

Group of orthologs #4. Best score 661 bits
Score difference with first non-orthologous sequence - P.pallidum:661 T.maritima:661

D3BG38              	100.00%		Q9WY41              	100.00%
D3BNJ7              	8.14%		Q9X1B1              	12.00%
Bootstrap support for D3BG38 as seed ortholog is 100%.
Bootstrap support for Q9WY41 as seed ortholog is 100%.

Group of orthologs #5. Best score 587 bits
Score difference with first non-orthologous sequence - P.pallidum:459 T.maritima:492

D3B434              	100.00%		O50550              	100.00%
Bootstrap support for D3B434 as seed ortholog is 100%.
Bootstrap support for O50550 as seed ortholog is 100%.

Group of orthologs #6. Best score 572 bits
Score difference with first non-orthologous sequence - P.pallidum:296 T.maritima:572

D3BVH1              	100.00%		Q9WZH5              	100.00%
Bootstrap support for D3BVH1 as seed ortholog is 100%.
Bootstrap support for Q9WZH5 as seed ortholog is 100%.

Group of orthologs #7. Best score 557 bits
Score difference with first non-orthologous sequence - P.pallidum:458 T.maritima:557

D3B3I9              	100.00%		Q9WYX6              	100.00%
Bootstrap support for D3B3I9 as seed ortholog is 100%.
Bootstrap support for Q9WYX6 as seed ortholog is 100%.

Group of orthologs #8. Best score 546 bits
Score difference with first non-orthologous sequence - P.pallidum:43 T.maritima:546

D3AY31              	100.00%		Q9WYK6              	100.00%
Bootstrap support for D3AY31 as seed ortholog is 80%.
Bootstrap support for Q9WYK6 as seed ortholog is 100%.

Group of orthologs #9. Best score 540 bits
Score difference with first non-orthologous sequence - P.pallidum:540 T.maritima:540

D3BMT5              	100.00%		Q9WZJ9              	100.00%
D3AY33              	8.79%		
Bootstrap support for D3BMT5 as seed ortholog is 100%.
Bootstrap support for Q9WZJ9 as seed ortholog is 100%.

Group of orthologs #10. Best score 539 bits
Score difference with first non-orthologous sequence - P.pallidum:539 T.maritima:539

D3B8U1              	100.00%		Q9X112              	100.00%
Bootstrap support for D3B8U1 as seed ortholog is 100%.
Bootstrap support for Q9X112 as seed ortholog is 100%.

Group of orthologs #11. Best score 535 bits
Score difference with first non-orthologous sequence - P.pallidum:18 T.maritima:149

D3BMN4              	100.00%		P38525              	100.00%
Bootstrap support for D3BMN4 as seed ortholog is 64%.
Alternative seed ortholog is D3BNW4 (18 bits away from this cluster)
Bootstrap support for P38525 as seed ortholog is 99%.

Group of orthologs #12. Best score 497 bits
Score difference with first non-orthologous sequence - P.pallidum:42 T.maritima:497

D3B7Q7              	100.00%		Q9X1B6              	100.00%
Bootstrap support for D3B7Q7 as seed ortholog is 75%.
Bootstrap support for Q9X1B6 as seed ortholog is 100%.

Group of orthologs #13. Best score 489 bits
Score difference with first non-orthologous sequence - P.pallidum:489 T.maritima:489

D3BEN7              	100.00%		Q9X2G6              	100.00%
Bootstrap support for D3BEN7 as seed ortholog is 100%.
Bootstrap support for Q9X2G6 as seed ortholog is 100%.

Group of orthologs #14. Best score 487 bits
Score difference with first non-orthologous sequence - P.pallidum:487 T.maritima:487

D3BAK5              	100.00%		Q9WYA1              	100.00%
Bootstrap support for D3BAK5 as seed ortholog is 100%.
Bootstrap support for Q9WYA1 as seed ortholog is 100%.

Group of orthologs #15. Best score 482 bits
Score difference with first non-orthologous sequence - P.pallidum:102 T.maritima:482

D3B4Y9              	100.00%		Q9WZ49              	100.00%
D3BDW2              	15.20%		
Bootstrap support for D3B4Y9 as seed ortholog is 99%.
Bootstrap support for Q9WZ49 as seed ortholog is 100%.

Group of orthologs #16. Best score 472 bits
Score difference with first non-orthologous sequence - P.pallidum:307 T.maritima:472

D3B7P5              	100.00%		P13537              	100.00%
Bootstrap support for D3B7P5 as seed ortholog is 100%.
Bootstrap support for P13537 as seed ortholog is 100%.

Group of orthologs #17. Best score 461 bits
Score difference with first non-orthologous sequence - P.pallidum:142 T.maritima:461

D3BKR5              	100.00%		P74926              	100.00%
Bootstrap support for D3BKR5 as seed ortholog is 99%.
Bootstrap support for P74926 as seed ortholog is 100%.

Group of orthologs #18. Best score 450 bits
Score difference with first non-orthologous sequence - P.pallidum:106 T.maritima:326

D3BT28              	100.00%		Q9X1E4              	100.00%
                    	       		Q9X049              	12.79%
Bootstrap support for D3BT28 as seed ortholog is 98%.
Bootstrap support for Q9X1E4 as seed ortholog is 100%.

Group of orthologs #19. Best score 447 bits
Score difference with first non-orthologous sequence - P.pallidum:447 T.maritima:447

D3B427              	100.00%		Q9X1Y8              	100.00%
Bootstrap support for D3B427 as seed ortholog is 100%.
Bootstrap support for Q9X1Y8 as seed ortholog is 100%.

Group of orthologs #20. Best score 432 bits
Score difference with first non-orthologous sequence - P.pallidum:308 T.maritima:432

D3B0D7              	100.00%		Q9X1F4              	100.00%
Bootstrap support for D3B0D7 as seed ortholog is 100%.
Bootstrap support for Q9X1F4 as seed ortholog is 100%.

Group of orthologs #21. Best score 427 bits
Score difference with first non-orthologous sequence - P.pallidum:261 T.maritima:427

D3BB49              	100.00%		Q9WYF3              	100.00%
D3BUW0              	16.15%		
D3BT51              	6.80%		
Bootstrap support for D3BB49 as seed ortholog is 100%.
Bootstrap support for Q9WYF3 as seed ortholog is 100%.

Group of orthologs #22. Best score 417 bits
Score difference with first non-orthologous sequence - P.pallidum:417 T.maritima:417

D3BP87              	100.00%		P42848              	100.00%
D3BH75              	54.05%		
Bootstrap support for D3BP87 as seed ortholog is 100%.
Bootstrap support for P42848 as seed ortholog is 100%.

Group of orthologs #23. Best score 414 bits
Score difference with first non-orthologous sequence - P.pallidum:414 T.maritima:414

D3BEZ7              	100.00%		Q9X178              	100.00%
Bootstrap support for D3BEZ7 as seed ortholog is 100%.
Bootstrap support for Q9X178 as seed ortholog is 100%.

Group of orthologs #24. Best score 411 bits
Score difference with first non-orthologous sequence - P.pallidum:320 T.maritima:411

D3BRU6              	100.00%		Q9X231              	100.00%
Bootstrap support for D3BRU6 as seed ortholog is 100%.
Bootstrap support for Q9X231 as seed ortholog is 100%.

Group of orthologs #25. Best score 410 bits
Score difference with first non-orthologous sequence - P.pallidum:410 T.maritima:410

D3B5W3              	100.00%		Q9WZR0              	100.00%
Bootstrap support for D3B5W3 as seed ortholog is 100%.
Bootstrap support for Q9WZR0 as seed ortholog is 100%.

Group of orthologs #26. Best score 406 bits
Score difference with first non-orthologous sequence - P.pallidum:406 T.maritima:406

D3B6S4              	100.00%		Q9WYR9              	100.00%
Bootstrap support for D3B6S4 as seed ortholog is 100%.
Bootstrap support for Q9WYR9 as seed ortholog is 100%.

Group of orthologs #27. Best score 404 bits
Score difference with first non-orthologous sequence - P.pallidum:404 T.maritima:404

D3BEC9              	100.00%		Q9X0N2              	100.00%
D3B1Q4              	27.13%		
Bootstrap support for D3BEC9 as seed ortholog is 100%.
Bootstrap support for Q9X0N2 as seed ortholog is 100%.

Group of orthologs #28. Best score 402 bits
Score difference with first non-orthologous sequence - P.pallidum:402 T.maritima:402

D3BGD9              	100.00%		P36204              	100.00%
Bootstrap support for D3BGD9 as seed ortholog is 100%.
Bootstrap support for P36204 as seed ortholog is 100%.

Group of orthologs #29. Best score 386 bits
Score difference with first non-orthologous sequence - P.pallidum:386 T.maritima:386

D3B0I3              	100.00%		Q9X1W8              	100.00%
D3BMY2              	12.87%		
Bootstrap support for D3B0I3 as seed ortholog is 100%.
Bootstrap support for Q9X1W8 as seed ortholog is 100%.

Group of orthologs #30. Best score 386 bits
Score difference with first non-orthologous sequence - P.pallidum:207 T.maritima:386

D3BAC1              	100.00%		Q9X0Z9              	100.00%
Bootstrap support for D3BAC1 as seed ortholog is 100%.
Bootstrap support for Q9X0Z9 as seed ortholog is 100%.

Group of orthologs #31. Best score 376 bits
Score difference with first non-orthologous sequence - P.pallidum:376 T.maritima:376

D3BPW8              	100.00%		Q9WYU4              	100.00%
Bootstrap support for D3BPW8 as seed ortholog is 100%.
Bootstrap support for Q9WYU4 as seed ortholog is 100%.

Group of orthologs #32. Best score 368 bits
Score difference with first non-orthologous sequence - P.pallidum:291 T.maritima:293

D3BT14              	100.00%		Q9WXZ5              	100.00%
Bootstrap support for D3BT14 as seed ortholog is 100%.
Bootstrap support for Q9WXZ5 as seed ortholog is 100%.

Group of orthologs #33. Best score 365 bits
Score difference with first non-orthologous sequence - P.pallidum:365 T.maritima:365

D3B508              	100.00%		Q9X100              	100.00%
Bootstrap support for D3B508 as seed ortholog is 100%.
Bootstrap support for Q9X100 as seed ortholog is 100%.

Group of orthologs #34. Best score 363 bits
Score difference with first non-orthologous sequence - P.pallidum:363 T.maritima:363

D3AZX3              	100.00%		Q9WYZ2              	100.00%
Bootstrap support for D3AZX3 as seed ortholog is 100%.
Bootstrap support for Q9WYZ2 as seed ortholog is 100%.

Group of orthologs #35. Best score 360 bits
Score difference with first non-orthologous sequence - P.pallidum:243 T.maritima:360

D3B236              	100.00%		P36203              	100.00%
Bootstrap support for D3B236 as seed ortholog is 100%.
Bootstrap support for P36203 as seed ortholog is 100%.

Group of orthologs #36. Best score 359 bits
Score difference with first non-orthologous sequence - P.pallidum:359 T.maritima:359

D3B2S5              	100.00%		Q9WZH9              	100.00%
D3BUR5              	53.42%		
Bootstrap support for D3B2S5 as seed ortholog is 100%.
Bootstrap support for Q9WZH9 as seed ortholog is 100%.

Group of orthologs #37. Best score 354 bits
Score difference with first non-orthologous sequence - P.pallidum:219 T.maritima:354

D3AY97              	100.00%		Q9WZN3              	100.00%
Bootstrap support for D3AY97 as seed ortholog is 99%.
Bootstrap support for Q9WZN3 as seed ortholog is 100%.

Group of orthologs #38. Best score 345 bits
Score difference with first non-orthologous sequence - P.pallidum:345 T.maritima:345

D3BJL2              	100.00%		Q9X287              	100.00%
Bootstrap support for D3BJL2 as seed ortholog is 100%.
Bootstrap support for Q9X287 as seed ortholog is 100%.

Group of orthologs #39. Best score 344 bits
Score difference with first non-orthologous sequence - P.pallidum:344 T.maritima:344

D3BB07              	100.00%		Q9X0N9              	100.00%
Bootstrap support for D3BB07 as seed ortholog is 100%.
Bootstrap support for Q9X0N9 as seed ortholog is 100%.

Group of orthologs #40. Best score 343 bits
Score difference with first non-orthologous sequence - P.pallidum:343 T.maritima:343

D3BQJ8              	100.00%		Q9X168              	100.00%
Bootstrap support for D3BQJ8 as seed ortholog is 100%.
Bootstrap support for Q9X168 as seed ortholog is 100%.

Group of orthologs #41. Best score 342 bits
Score difference with first non-orthologous sequence - P.pallidum:342 T.maritima:342

D3BGU4              	100.00%		Q9X1V4              	100.00%
Bootstrap support for D3BGU4 as seed ortholog is 100%.
Bootstrap support for Q9X1V4 as seed ortholog is 100%.

Group of orthologs #42. Best score 340 bits
Score difference with first non-orthologous sequence - P.pallidum:340 T.maritima:340

D3BLC0              	100.00%		Q9WY70              	100.00%
                    	       		Q9WXM5              	30.36%
                    	       		G4FFG0              	18.91%
Bootstrap support for D3BLC0 as seed ortholog is 100%.
Bootstrap support for Q9WY70 as seed ortholog is 100%.

Group of orthologs #43. Best score 340 bits
Score difference with first non-orthologous sequence - P.pallidum:340 T.maritima:340

D3AXF4              	100.00%		Q9X2A3              	100.00%
Bootstrap support for D3AXF4 as seed ortholog is 100%.
Bootstrap support for Q9X2A3 as seed ortholog is 100%.

Group of orthologs #44. Best score 333 bits
Score difference with first non-orthologous sequence - P.pallidum:100 T.maritima:230

D3BJ28              	100.00%		Q9WXM0              	100.00%
Bootstrap support for D3BJ28 as seed ortholog is 98%.
Bootstrap support for Q9WXM0 as seed ortholog is 100%.

Group of orthologs #45. Best score 333 bits
Score difference with first non-orthologous sequence - P.pallidum:118 T.maritima:333

D3BGV8              	100.00%		Q9X2A5              	100.00%
Bootstrap support for D3BGV8 as seed ortholog is 99%.
Bootstrap support for Q9X2A5 as seed ortholog is 100%.

Group of orthologs #46. Best score 325 bits
Score difference with first non-orthologous sequence - P.pallidum:217 T.maritima:124

D3BDE2              	100.00%		Q9WXX1              	100.00%
D3BDD5              	6.97%		
Bootstrap support for D3BDE2 as seed ortholog is 100%.
Bootstrap support for Q9WXX1 as seed ortholog is 99%.

Group of orthologs #47. Best score 323 bits
Score difference with first non-orthologous sequence - P.pallidum:323 T.maritima:142

D3B5V0              	100.00%		Q9WXT1              	100.00%
D3BT95              	45.08%		
D3B0Y5              	34.08%		
Bootstrap support for D3B5V0 as seed ortholog is 100%.
Bootstrap support for Q9WXT1 as seed ortholog is 99%.

Group of orthologs #48. Best score 322 bits
Score difference with first non-orthologous sequence - P.pallidum:7 T.maritima:322

D3BQ59              	100.00%		Q9X0R4              	100.00%
Bootstrap support for D3BQ59 as seed ortholog is 47%.
Alternative seed ortholog is D3BDE5 (7 bits away from this cluster)
Bootstrap support for Q9X0R4 as seed ortholog is 100%.

Group of orthologs #49. Best score 319 bits
Score difference with first non-orthologous sequence - P.pallidum:319 T.maritima:319

D3BJK4              	100.00%		P36252              	100.00%
D3BKC8              	12.31%		
D3BS87              	7.39%		
Bootstrap support for D3BJK4 as seed ortholog is 100%.
Bootstrap support for P36252 as seed ortholog is 100%.

Group of orthologs #50. Best score 312 bits
Score difference with first non-orthologous sequence - P.pallidum:312 T.maritima:312

D3BM55              	100.00%		Q9WYA5              	100.00%
Bootstrap support for D3BM55 as seed ortholog is 100%.
Bootstrap support for Q9WYA5 as seed ortholog is 100%.

Group of orthologs #51. Best score 307 bits
Score difference with first non-orthologous sequence - P.pallidum:193 T.maritima:307

D3BEV9              	100.00%		Q9WYY4              	100.00%
Bootstrap support for D3BEV9 as seed ortholog is 99%.
Bootstrap support for Q9WYY4 as seed ortholog is 100%.

Group of orthologs #52. Best score 306 bits
Score difference with first non-orthologous sequence - P.pallidum:306 T.maritima:306

D3AWY5              	100.00%		Q9X1V9              	100.00%
Bootstrap support for D3AWY5 as seed ortholog is 100%.
Bootstrap support for Q9X1V9 as seed ortholog is 100%.

Group of orthologs #53. Best score 299 bits
Score difference with first non-orthologous sequence - P.pallidum:103 T.maritima:299

D3B9T8              	100.00%		O33925              	100.00%
Bootstrap support for D3B9T8 as seed ortholog is 96%.
Bootstrap support for O33925 as seed ortholog is 100%.

Group of orthologs #54. Best score 299 bits
Score difference with first non-orthologous sequence - P.pallidum:299 T.maritima:299

D3BKN6              	100.00%		Q9WZQ9              	100.00%
Bootstrap support for D3BKN6 as seed ortholog is 100%.
Bootstrap support for Q9WZQ9 as seed ortholog is 100%.

Group of orthologs #55. Best score 299 bits
Score difference with first non-orthologous sequence - P.pallidum:299 T.maritima:299

D3BV45              	100.00%		P17721              	100.00%
Bootstrap support for D3BV45 as seed ortholog is 100%.
Bootstrap support for P17721 as seed ortholog is 100%.

Group of orthologs #56. Best score 297 bits
Score difference with first non-orthologous sequence - P.pallidum:297 T.maritima:297

D3B061              	100.00%		P96110              	100.00%
Bootstrap support for D3B061 as seed ortholog is 100%.
Bootstrap support for P96110 as seed ortholog is 100%.

Group of orthologs #57. Best score 295 bits
Score difference with first non-orthologous sequence - P.pallidum:295 T.maritima:295

D3B5G2              	100.00%		Q9X183              	100.00%
Bootstrap support for D3B5G2 as seed ortholog is 100%.
Bootstrap support for Q9X183 as seed ortholog is 100%.

Group of orthologs #58. Best score 294 bits
Score difference with first non-orthologous sequence - P.pallidum:60 T.maritima:294

D3BBH9              	100.00%		Q9WYN3              	100.00%
D3AZZ2              	5.74%		
Bootstrap support for D3BBH9 as seed ortholog is 91%.
Bootstrap support for Q9WYN3 as seed ortholog is 100%.

Group of orthologs #59. Best score 291 bits
Score difference with first non-orthologous sequence - P.pallidum:291 T.maritima:291

D3BU50              	100.00%		Q9X2I8              	100.00%
                    	       		Q9X172              	17.09%
Bootstrap support for D3BU50 as seed ortholog is 100%.
Bootstrap support for Q9X2I8 as seed ortholog is 100%.

Group of orthologs #60. Best score 290 bits
Score difference with first non-orthologous sequence - P.pallidum:290 T.maritima:290

D3BTQ4              	100.00%		Q9X0I1              	100.00%
Bootstrap support for D3BTQ4 as seed ortholog is 100%.
Bootstrap support for Q9X0I1 as seed ortholog is 100%.

Group of orthologs #61. Best score 285 bits
Score difference with first non-orthologous sequence - P.pallidum:285 T.maritima:285

D3BNY4              	100.00%		O51933              	100.00%
Bootstrap support for D3BNY4 as seed ortholog is 100%.
Bootstrap support for O51933 as seed ortholog is 100%.

Group of orthologs #62. Best score 285 bits
Score difference with first non-orthologous sequence - P.pallidum:285 T.maritima:285

D3BSA3              	100.00%		Q9X2E0              	100.00%
Bootstrap support for D3BSA3 as seed ortholog is 100%.
Bootstrap support for Q9X2E0 as seed ortholog is 100%.

Group of orthologs #63. Best score 283 bits
Score difference with first non-orthologous sequence - P.pallidum:9 T.maritima:45

D3AW75              	100.00%		Q9WYC4              	100.00%
D3BVI8              	6.08%		
Bootstrap support for D3AW75 as seed ortholog is 41%.
Alternative seed ortholog is D3AVP3 (9 bits away from this cluster)
Bootstrap support for Q9WYC4 as seed ortholog is 86%.

Group of orthologs #64. Best score 283 bits
Score difference with first non-orthologous sequence - P.pallidum:283 T.maritima:283

D3BBS1              	100.00%		Q9X1F8              	100.00%
Bootstrap support for D3BBS1 as seed ortholog is 100%.
Bootstrap support for Q9X1F8 as seed ortholog is 100%.

Group of orthologs #65. Best score 281 bits
Score difference with first non-orthologous sequence - P.pallidum:281 T.maritima:281

D3B6S6              	100.00%		Q9WYX8              	100.00%
Bootstrap support for D3B6S6 as seed ortholog is 100%.
Bootstrap support for Q9WYX8 as seed ortholog is 100%.

Group of orthologs #66. Best score 280 bits
Score difference with first non-orthologous sequence - P.pallidum:57 T.maritima:280

D3AXY2              	100.00%		Q9X1P7              	100.00%
Bootstrap support for D3AXY2 as seed ortholog is 92%.
Bootstrap support for Q9X1P7 as seed ortholog is 100%.

Group of orthologs #67. Best score 273 bits
Score difference with first non-orthologous sequence - P.pallidum:273 T.maritima:273

D3BQM3              	100.00%		Q9WZH8              	100.00%
D3BDT0              	7.04%		
Bootstrap support for D3BQM3 as seed ortholog is 100%.
Bootstrap support for Q9WZH8 as seed ortholog is 100%.

Group of orthologs #68. Best score 273 bits
Score difference with first non-orthologous sequence - P.pallidum:273 T.maritima:273

D3BH30              	100.00%		Q9X1R5              	100.00%
Bootstrap support for D3BH30 as seed ortholog is 100%.
Bootstrap support for Q9X1R5 as seed ortholog is 100%.

Group of orthologs #69. Best score 272 bits
Score difference with first non-orthologous sequence - P.pallidum:272 T.maritima:272

D3B0M1              	100.00%		Q9WY51              	100.00%
Bootstrap support for D3B0M1 as seed ortholog is 100%.
Bootstrap support for Q9WY51 as seed ortholog is 100%.

Group of orthologs #70. Best score 271 bits
Score difference with first non-orthologous sequence - P.pallidum:271 T.maritima:271

D3B0P9              	100.00%		Q9WXV3              	100.00%
Bootstrap support for D3B0P9 as seed ortholog is 100%.
Bootstrap support for Q9WXV3 as seed ortholog is 100%.

Group of orthologs #71. Best score 269 bits
Score difference with first non-orthologous sequence - P.pallidum:269 T.maritima:113

D3BAC0              	100.00%		Q9WZC1              	100.00%
Bootstrap support for D3BAC0 as seed ortholog is 100%.
Bootstrap support for Q9WZC1 as seed ortholog is 99%.

Group of orthologs #72. Best score 268 bits
Score difference with first non-orthologous sequence - P.pallidum:268 T.maritima:268

D3BF26              	100.00%		Q9WYE2              	100.00%
D3B1X4              	49.45%		
D3AX79              	47.54%		
D3AWH0              	40.16%		
D3AWU7              	37.43%		
Bootstrap support for D3BF26 as seed ortholog is 100%.
Bootstrap support for Q9WYE2 as seed ortholog is 100%.

Group of orthologs #73. Best score 266 bits
Score difference with first non-orthologous sequence - P.pallidum:266 T.maritima:266

D3BEX2              	100.00%		Q9X199              	100.00%
Bootstrap support for D3BEX2 as seed ortholog is 100%.
Bootstrap support for Q9X199 as seed ortholog is 100%.

Group of orthologs #74. Best score 260 bits
Score difference with first non-orthologous sequence - P.pallidum:260 T.maritima:260

D3BTS5              	100.00%		Q9X1W3              	100.00%
Bootstrap support for D3BTS5 as seed ortholog is 100%.
Bootstrap support for Q9X1W3 as seed ortholog is 100%.

Group of orthologs #75. Best score 255 bits
Score difference with first non-orthologous sequence - P.pallidum:255 T.maritima:255

D3BB77              	100.00%		Q9WYS5              	100.00%
Bootstrap support for D3BB77 as seed ortholog is 100%.
Bootstrap support for Q9WYS5 as seed ortholog is 100%.

Group of orthologs #76. Best score 253 bits
Score difference with first non-orthologous sequence - P.pallidum:140 T.maritima:253

D3BHQ1              	100.00%		Q9X0H5              	100.00%
Bootstrap support for D3BHQ1 as seed ortholog is 99%.
Bootstrap support for Q9X0H5 as seed ortholog is 100%.

Group of orthologs #77. Best score 252 bits
Score difference with first non-orthologous sequence - P.pallidum:252 T.maritima:252

D3BPT5              	100.00%		Q9X0X4              	100.00%
Bootstrap support for D3BPT5 as seed ortholog is 100%.
Bootstrap support for Q9X0X4 as seed ortholog is 100%.

Group of orthologs #78. Best score 247 bits
Score difference with first non-orthologous sequence - P.pallidum:4 T.maritima:247

D3BI35              	100.00%		Q9WYC6              	100.00%
D3AVV7              	50.53%		
Bootstrap support for D3BI35 as seed ortholog is 45%.
Alternative seed ortholog is D3BAD3 (4 bits away from this cluster)
Bootstrap support for Q9WYC6 as seed ortholog is 100%.

Group of orthologs #79. Best score 245 bits
Score difference with first non-orthologous sequence - P.pallidum:245 T.maritima:245

D3BAS1              	100.00%		O08398              	100.00%
Bootstrap support for D3BAS1 as seed ortholog is 100%.
Bootstrap support for O08398 as seed ortholog is 100%.

Group of orthologs #80. Best score 245 bits
Score difference with first non-orthologous sequence - P.pallidum:245 T.maritima:245

D3BI88              	100.00%		Q9X0X6              	100.00%
Bootstrap support for D3BI88 as seed ortholog is 100%.
Bootstrap support for Q9X0X6 as seed ortholog is 100%.

Group of orthologs #81. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:10 T.maritima:240

D3AY64              	100.00%		Q9X0W7              	100.00%
Bootstrap support for D3AY64 as seed ortholog is 59%.
Alternative seed ortholog is D3BV27 (10 bits away from this cluster)
Bootstrap support for Q9X0W7 as seed ortholog is 100%.

Group of orthologs #82. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:166 T.maritima:240

D3BL61              	100.00%		Q9X013              	100.00%
Bootstrap support for D3BL61 as seed ortholog is 100%.
Bootstrap support for Q9X013 as seed ortholog is 100%.

Group of orthologs #83. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:240 T.maritima:240

D3BQY2              	100.00%		Q9WZU7              	100.00%
Bootstrap support for D3BQY2 as seed ortholog is 100%.
Bootstrap support for Q9WZU7 as seed ortholog is 100%.

Group of orthologs #84. Best score 237 bits
Score difference with first non-orthologous sequence - P.pallidum:237 T.maritima:15

D3BFM3              	100.00%		Q9WZY4              	100.00%
D3BCH9              	8.56%		
Bootstrap support for D3BFM3 as seed ortholog is 100%.
Bootstrap support for Q9WZY4 as seed ortholog is 64%.
Alternative seed ortholog is Q9X0Z7 (15 bits away from this cluster)

Group of orthologs #85. Best score 233 bits
Score difference with first non-orthologous sequence - P.pallidum:233 T.maritima:233

D3BJB3              	100.00%		Q9X0X7              	100.00%
Bootstrap support for D3BJB3 as seed ortholog is 100%.
Bootstrap support for Q9X0X7 as seed ortholog is 100%.

Group of orthologs #86. Best score 231 bits
Score difference with first non-orthologous sequence - P.pallidum:120 T.maritima:167

D3B961              	100.00%		Q9WYJ1              	100.00%
Bootstrap support for D3B961 as seed ortholog is 99%.
Bootstrap support for Q9WYJ1 as seed ortholog is 100%.

Group of orthologs #87. Best score 229 bits
Score difference with first non-orthologous sequence - P.pallidum:229 T.maritima:229

D3B8W7              	100.00%		Q9X0G6              	100.00%
Bootstrap support for D3B8W7 as seed ortholog is 100%.
Bootstrap support for Q9X0G6 as seed ortholog is 100%.

Group of orthologs #88. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:39 T.maritima:225

D3BHD6              	100.00%		P29398              	100.00%
D3B936              	11.43%		
Bootstrap support for D3BHD6 as seed ortholog is 74%.
Alternative seed ortholog is D3B127 (39 bits away from this cluster)
Bootstrap support for P29398 as seed ortholog is 100%.

Group of orthologs #89. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:225 T.maritima:175

D3BQ30              	100.00%		Q9WZX3              	100.00%
Bootstrap support for D3BQ30 as seed ortholog is 100%.
Bootstrap support for Q9WZX3 as seed ortholog is 99%.

Group of orthologs #90. Best score 223 bits
Score difference with first non-orthologous sequence - P.pallidum:154 T.maritima:223

D3BFI2              	100.00%		Q9WZM7              	100.00%
Bootstrap support for D3BFI2 as seed ortholog is 99%.
Bootstrap support for Q9WZM7 as seed ortholog is 100%.

Group of orthologs #91. Best score 220 bits
Score difference with first non-orthologous sequence - P.pallidum:220 T.maritima:88

D3BBV3              	100.00%		Q9X1Q1              	100.00%
Bootstrap support for D3BBV3 as seed ortholog is 100%.
Bootstrap support for Q9X1Q1 as seed ortholog is 99%.

Group of orthologs #92. Best score 216 bits
Score difference with first non-orthologous sequence - P.pallidum:216 T.maritima:216

D3B544              	100.00%		Q9WYA4              	100.00%
Bootstrap support for D3B544 as seed ortholog is 100%.
Bootstrap support for Q9WYA4 as seed ortholog is 100%.

Group of orthologs #93. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:34 T.maritima:215

D3BR73              	100.00%		Q9X0A2              	100.00%
Bootstrap support for D3BR73 as seed ortholog is 85%.
Bootstrap support for Q9X0A2 as seed ortholog is 100%.

Group of orthologs #94. Best score 214 bits
Score difference with first non-orthologous sequence - P.pallidum:214 T.maritima:214

D3BHT0              	100.00%		Q9WZC2              	100.00%
Bootstrap support for D3BHT0 as seed ortholog is 100%.
Bootstrap support for Q9WZC2 as seed ortholog is 100%.

Group of orthologs #95. Best score 211 bits
Score difference with first non-orthologous sequence - P.pallidum:211 T.maritima:211

D3B6I9              	100.00%		Q9WZI1              	100.00%
D3BMW0              	10.72%		
D3B3H4              	7.93%		
Bootstrap support for D3B6I9 as seed ortholog is 100%.
Bootstrap support for Q9WZI1 as seed ortholog is 100%.

Group of orthologs #96. Best score 209 bits
Score difference with first non-orthologous sequence - P.pallidum:48 T.maritima:145

D3BRT1              	100.00%		Q9WZD3              	100.00%
Bootstrap support for D3BRT1 as seed ortholog is 90%.
Bootstrap support for Q9WZD3 as seed ortholog is 99%.

Group of orthologs #97. Best score 207 bits
Score difference with first non-orthologous sequence - P.pallidum:36 T.maritima:207

D3BEC0              	100.00%		Q9WZV3              	100.00%
Bootstrap support for D3BEC0 as seed ortholog is 88%.
Bootstrap support for Q9WZV3 as seed ortholog is 100%.

Group of orthologs #98. Best score 203 bits
Score difference with first non-orthologous sequence - P.pallidum:203 T.maritima:203

D3B0J0              	100.00%		Q9WY54              	100.00%
Bootstrap support for D3B0J0 as seed ortholog is 100%.
Bootstrap support for Q9WY54 as seed ortholog is 100%.

Group of orthologs #99. Best score 202 bits
Score difference with first non-orthologous sequence - P.pallidum:202 T.maritima:202

D3AWU9              	100.00%		Q9X1C0              	100.00%
Bootstrap support for D3AWU9 as seed ortholog is 100%.
Bootstrap support for Q9X1C0 as seed ortholog is 100%.

Group of orthologs #100. Best score 201 bits
Score difference with first non-orthologous sequence - P.pallidum:201 T.maritima:91

D3BBH0              	100.00%		Q9WY99              	100.00%
Bootstrap support for D3BBH0 as seed ortholog is 100%.
Bootstrap support for Q9WY99 as seed ortholog is 99%.

Group of orthologs #101. Best score 195 bits
Score difference with first non-orthologous sequence - P.pallidum:195 T.maritima:195

D3B3B5              	100.00%		Q9WY03              	100.00%
Bootstrap support for D3B3B5 as seed ortholog is 100%.
Bootstrap support for Q9WY03 as seed ortholog is 100%.

Group of orthologs #102. Best score 194 bits
Score difference with first non-orthologous sequence - P.pallidum:194 T.maritima:129

D3AWE7              	100.00%		Q9X2I3              	100.00%
Bootstrap support for D3AWE7 as seed ortholog is 100%.
Bootstrap support for Q9X2I3 as seed ortholog is 99%.

Group of orthologs #103. Best score 193 bits
Score difference with first non-orthologous sequence - P.pallidum:193 T.maritima:193

D3BG85              	100.00%		Q9WYZ1              	100.00%
Bootstrap support for D3BG85 as seed ortholog is 100%.
Bootstrap support for Q9WYZ1 as seed ortholog is 100%.

Group of orthologs #104. Best score 188 bits
Score difference with first non-orthologous sequence - P.pallidum:188 T.maritima:188

D3BMI1              	100.00%		Q9X240              	100.00%
Bootstrap support for D3BMI1 as seed ortholog is 100%.
Bootstrap support for Q9X240 as seed ortholog is 100%.

Group of orthologs #105. Best score 187 bits
Score difference with first non-orthologous sequence - P.pallidum:187 T.maritima:187

D3BTY9              	100.00%		Q9WYC7              	100.00%
                    	       		Q9WZ24              	35.46%
Bootstrap support for D3BTY9 as seed ortholog is 100%.
Bootstrap support for Q9WYC7 as seed ortholog is 100%.

Group of orthologs #106. Best score 185 bits
Score difference with first non-orthologous sequence - P.pallidum:185 T.maritima:185

D3BD73              	100.00%		Q9X295              	100.00%
Bootstrap support for D3BD73 as seed ortholog is 100%.
Bootstrap support for Q9X295 as seed ortholog is 100%.

Group of orthologs #107. Best score 183 bits
Score difference with first non-orthologous sequence - P.pallidum:86 T.maritima:183

D3B6A7              	100.00%		Q9X288              	100.00%
Bootstrap support for D3B6A7 as seed ortholog is 99%.
Bootstrap support for Q9X288 as seed ortholog is 100%.

Group of orthologs #108. Best score 183 bits
Score difference with first non-orthologous sequence - P.pallidum:20 T.maritima:15

D3BAQ8              	100.00%		Q9X248              	100.00%
Bootstrap support for D3BAQ8 as seed ortholog is 73%.
Alternative seed ortholog is D3BHM9 (20 bits away from this cluster)
Bootstrap support for Q9X248 as seed ortholog is 69%.
Alternative seed ortholog is Q9WYG0 (15 bits away from this cluster)

Group of orthologs #109. Best score 179 bits
Score difference with first non-orthologous sequence - P.pallidum:179 T.maritima:179

D3AZS9              	100.00%		Q9X1I7              	100.00%
D3BGF6              	8.48%		
Bootstrap support for D3AZS9 as seed ortholog is 100%.
Bootstrap support for Q9X1I7 as seed ortholog is 100%.

Group of orthologs #110. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 T.maritima:59

D3B7P8              	100.00%		Q9WYI7              	100.00%
D3B0C5              	18.75%		Q9WZG4              	11.54%
Bootstrap support for D3B7P8 as seed ortholog is 100%.
Bootstrap support for Q9WYI7 as seed ortholog is 98%.

Group of orthologs #111. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 T.maritima:126

D3B280              	100.00%		Q9X1S9              	100.00%
D3BV53              	24.64%		
Bootstrap support for D3B280 as seed ortholog is 100%.
Bootstrap support for Q9X1S9 as seed ortholog is 99%.

Group of orthologs #112. Best score 173 bits
Score difference with first non-orthologous sequence - P.pallidum:100 T.maritima:173

D3BNF2              	100.00%		Q9X034              	100.00%
Bootstrap support for D3BNF2 as seed ortholog is 99%.
Bootstrap support for Q9X034 as seed ortholog is 100%.

Group of orthologs #113. Best score 171 bits
Score difference with first non-orthologous sequence - P.pallidum:171 T.maritima:171

D3BE64              	100.00%		Q9S5Y2              	100.00%
Bootstrap support for D3BE64 as seed ortholog is 100%.
Bootstrap support for Q9S5Y2 as seed ortholog is 100%.

Group of orthologs #114. Best score 169 bits
Score difference with first non-orthologous sequence - P.pallidum:169 T.maritima:112

D3BD10              	100.00%		Q9WYL2              	100.00%
Bootstrap support for D3BD10 as seed ortholog is 100%.
Bootstrap support for Q9WYL2 as seed ortholog is 99%.

Group of orthologs #115. Best score 168 bits
Score difference with first non-orthologous sequence - P.pallidum:59 T.maritima:168

D3AYT1              	100.00%		Q9WYT3              	100.00%
Bootstrap support for D3AYT1 as seed ortholog is 89%.
Bootstrap support for Q9WYT3 as seed ortholog is 100%.

Group of orthologs #116. Best score 168 bits
Score difference with first non-orthologous sequence - P.pallidum:168 T.maritima:168

D3BM59              	100.00%		P36205              	100.00%
Bootstrap support for D3BM59 as seed ortholog is 100%.
Bootstrap support for P36205 as seed ortholog is 100%.

Group of orthologs #117. Best score 167 bits
Score difference with first non-orthologous sequence - P.pallidum:7 T.maritima:167

D3AX55              	100.00%		Q9WZ18              	100.00%
Bootstrap support for D3AX55 as seed ortholog is 55%.
Alternative seed ortholog is D3B6S5 (7 bits away from this cluster)
Bootstrap support for Q9WZ18 as seed ortholog is 100%.

Group of orthologs #118. Best score 167 bits
Score difference with first non-orthologous sequence - P.pallidum:167 T.maritima:167

D3BLB0              	100.00%		Q9WYT0              	100.00%
Bootstrap support for D3BLB0 as seed ortholog is 100%.
Bootstrap support for Q9WYT0 as seed ortholog is 100%.

Group of orthologs #119. Best score 166 bits
Score difference with first non-orthologous sequence - P.pallidum:13 T.maritima:166

D3BI20              	100.00%		Q9X1C1              	100.00%
D3BSP0              	100.00%		Q9WYG2              	7.57%
Bootstrap support for D3BI20 as seed ortholog is 69%.
Alternative seed ortholog is D3BRT8 (13 bits away from this cluster)
Bootstrap support for D3BSP0 as seed ortholog is 67%.
Alternative seed ortholog is D3BRT8 (13 bits away from this cluster)
Bootstrap support for Q9X1C1 as seed ortholog is 100%.

Group of orthologs #120. Best score 166 bits
Score difference with first non-orthologous sequence - P.pallidum:18 T.maritima:166

D3B700              	100.00%		Q9WY61              	100.00%
Bootstrap support for D3B700 as seed ortholog is 62%.
Alternative seed ortholog is D3B5K2 (18 bits away from this cluster)
Bootstrap support for Q9WY61 as seed ortholog is 100%.

Group of orthologs #121. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:163 T.maritima:163

D3BN80              	100.00%		Q9WYZ0              	100.00%
Bootstrap support for D3BN80 as seed ortholog is 100%.
Bootstrap support for Q9WYZ0 as seed ortholog is 100%.

Group of orthologs #122. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:29 T.maritima:162

D3AY59              	100.00%		Q9X1I8              	100.00%
Bootstrap support for D3AY59 as seed ortholog is 87%.
Bootstrap support for Q9X1I8 as seed ortholog is 100%.

Group of orthologs #123. Best score 161 bits
Score difference with first non-orthologous sequence - P.pallidum:113 T.maritima:161

D3B4M5              	100.00%		Q9WYW2              	100.00%
Bootstrap support for D3B4M5 as seed ortholog is 99%.
Bootstrap support for Q9WYW2 as seed ortholog is 100%.

Group of orthologs #124. Best score 160 bits
Score difference with first non-orthologous sequence - P.pallidum:160 T.maritima:160

D3BP76              	100.00%		Q9X1L7              	100.00%
Bootstrap support for D3BP76 as seed ortholog is 100%.
Bootstrap support for Q9X1L7 as seed ortholog is 100%.

Group of orthologs #125. Best score 159 bits
Score difference with first non-orthologous sequence - P.pallidum:159 T.maritima:159

D3BK71              	100.00%		Q9WZ26              	100.00%
D3BEF6              	8.66%		
Bootstrap support for D3BK71 as seed ortholog is 100%.
Bootstrap support for Q9WZ26 as seed ortholog is 100%.

Group of orthologs #126. Best score 158 bits
Score difference with first non-orthologous sequence - P.pallidum:158 T.maritima:158

D3BIB6              	100.00%		Q9X1X8              	100.00%
D3BIB9              	5.76%		
Bootstrap support for D3BIB6 as seed ortholog is 100%.
Bootstrap support for Q9X1X8 as seed ortholog is 100%.

Group of orthologs #127. Best score 156 bits
Score difference with first non-orthologous sequence - P.pallidum:81 T.maritima:156

D3B1Q6              	100.00%		Q9X2I6              	100.00%
Bootstrap support for D3B1Q6 as seed ortholog is 98%.
Bootstrap support for Q9X2I6 as seed ortholog is 100%.

Group of orthologs #128. Best score 154 bits
Score difference with first non-orthologous sequence - P.pallidum:14 T.maritima:154

D3AYE6              	100.00%		Q9X1K5              	100.00%
Bootstrap support for D3AYE6 as seed ortholog is 60%.
Alternative seed ortholog is D3BE71 (14 bits away from this cluster)
Bootstrap support for Q9X1K5 as seed ortholog is 100%.

Group of orthologs #129. Best score 154 bits
Score difference with first non-orthologous sequence - P.pallidum:100 T.maritima:154

D3B3D4              	100.00%		Q9WZQ5              	100.00%
Bootstrap support for D3B3D4 as seed ortholog is 99%.
Bootstrap support for Q9WZQ5 as seed ortholog is 100%.

Group of orthologs #130. Best score 152 bits
Score difference with first non-orthologous sequence - P.pallidum:4 T.maritima:152

D3BB40              	100.00%		Q9X051              	100.00%
D3BGA0              	39.56%		Q9WXX0              	35.14%
D3BG99              	36.81%		Q9WXV8              	21.97%
Bootstrap support for D3BB40 as seed ortholog is 53%.
Alternative seed ortholog is D3B2N2 (4 bits away from this cluster)
Bootstrap support for Q9X051 as seed ortholog is 100%.

Group of orthologs #131. Best score 150 bits
Score difference with first non-orthologous sequence - P.pallidum:150 T.maritima:150

D3BM60              	100.00%		O33832              	100.00%
Bootstrap support for D3BM60 as seed ortholog is 100%.
Bootstrap support for O33832 as seed ortholog is 100%.

Group of orthologs #132. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 T.maritima:149

D3AXK2              	100.00%		P38515              	100.00%
Bootstrap support for D3AXK2 as seed ortholog is 100%.
Bootstrap support for P38515 as seed ortholog is 100%.

Group of orthologs #133. Best score 148 bits
Score difference with first non-orthologous sequence - P.pallidum:148 T.maritima:148

D3BP16              	100.00%		Q9WYE4              	100.00%
D3BIK5              	9.98%		
D3B222              	9.80%		
D3BIK6              	8.58%		
Bootstrap support for D3BP16 as seed ortholog is 100%.
Bootstrap support for Q9WYE4 as seed ortholog is 100%.

Group of orthologs #134. Best score 148 bits
Score difference with first non-orthologous sequence - P.pallidum:57 T.maritima:148

D3BGL7              	100.00%		Q9WYZ5              	100.00%
Bootstrap support for D3BGL7 as seed ortholog is 89%.
Bootstrap support for Q9WYZ5 as seed ortholog is 100%.

Group of orthologs #135. Best score 141 bits
Score difference with first non-orthologous sequence - P.pallidum:141 T.maritima:141

D3BII7              	100.00%		Q9WY44              	100.00%
                    	       		G4FFG1              	24.56%
Bootstrap support for D3BII7 as seed ortholog is 100%.
Bootstrap support for Q9WY44 as seed ortholog is 100%.

Group of orthologs #136. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:90 T.maritima:140

D3B4D7              	100.00%		Q9WYM6              	100.00%
Bootstrap support for D3B4D7 as seed ortholog is 99%.
Bootstrap support for Q9WYM6 as seed ortholog is 100%.

Group of orthologs #137. Best score 136 bits
Score difference with first non-orthologous sequence - P.pallidum:136 T.maritima:136

D3BBV1              	100.00%		Q9WZQ4              	100.00%
Bootstrap support for D3BBV1 as seed ortholog is 100%.
Bootstrap support for Q9WZQ4 as seed ortholog is 100%.

Group of orthologs #138. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 T.maritima:134

D3B0G9              	100.00%		Q9X079              	100.00%
Bootstrap support for D3B0G9 as seed ortholog is 100%.
Bootstrap support for Q9X079 as seed ortholog is 100%.

Group of orthologs #139. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:56 T.maritima:134

D3B9J3              	100.00%		Q9X1L8              	100.00%
Bootstrap support for D3B9J3 as seed ortholog is 90%.
Bootstrap support for Q9X1L8 as seed ortholog is 100%.

Group of orthologs #140. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 T.maritima:134

D3BI18              	100.00%		Q9X1W1              	100.00%
Bootstrap support for D3BI18 as seed ortholog is 100%.
Bootstrap support for Q9X1W1 as seed ortholog is 100%.

Group of orthologs #141. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:10 T.maritima:133

D3AWX8              	100.00%		Q9X0Y2              	100.00%
                    	       		Q9X224              	5.46%
Bootstrap support for D3AWX8 as seed ortholog is 59%.
Alternative seed ortholog is D3B9D9 (10 bits away from this cluster)
Bootstrap support for Q9X0Y2 as seed ortholog is 100%.

Group of orthologs #142. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:133 T.maritima:133

D3BIF3              	100.00%		G4FH33              	100.00%
Bootstrap support for D3BIF3 as seed ortholog is 100%.
Bootstrap support for G4FH33 as seed ortholog is 100%.

Group of orthologs #143. Best score 132 bits
Score difference with first non-orthologous sequence - P.pallidum:132 T.maritima:132

D3B1V3              	100.00%		Q9WY55              	100.00%
Bootstrap support for D3B1V3 as seed ortholog is 100%.
Bootstrap support for Q9WY55 as seed ortholog is 100%.

Group of orthologs #144. Best score 132 bits
Score difference with first non-orthologous sequence - P.pallidum:132 T.maritima:132

D3BCK2              	100.00%		Q9WYW0              	100.00%
Bootstrap support for D3BCK2 as seed ortholog is 100%.
Bootstrap support for Q9WYW0 as seed ortholog is 100%.

Group of orthologs #145. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:61 T.maritima:131

D3BE81              	100.00%		Q9WYX9              	100.00%
D3BCT5              	59.30%		Q9WZ98              	6.98%
Bootstrap support for D3BE81 as seed ortholog is 95%.
Bootstrap support for Q9WYX9 as seed ortholog is 100%.

Group of orthologs #146. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 T.maritima:131

D3BN51              	100.00%		Q9X243              	100.00%
Bootstrap support for D3BN51 as seed ortholog is 100%.
Bootstrap support for Q9X243 as seed ortholog is 100%.

Group of orthologs #147. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:130 T.maritima:130

D3BN16              	100.00%		Q9WXW6              	100.00%
                    	       		Q9WZS7              	13.71%
                    	       		Q9X022              	7.48%
Bootstrap support for D3BN16 as seed ortholog is 100%.
Bootstrap support for Q9WXW6 as seed ortholog is 100%.

Group of orthologs #148. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:36 T.maritima:130

D3B632              	100.00%		Q9WXP9              	100.00%
Bootstrap support for D3B632 as seed ortholog is 80%.
Bootstrap support for Q9WXP9 as seed ortholog is 100%.

Group of orthologs #149. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:130 T.maritima:130

D3B885              	100.00%		Q9WY13              	100.00%
Bootstrap support for D3B885 as seed ortholog is 100%.
Bootstrap support for Q9WY13 as seed ortholog is 100%.

Group of orthologs #150. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:129 T.maritima:129

D3BMN0              	100.00%		Q9X1K0              	100.00%
Bootstrap support for D3BMN0 as seed ortholog is 100%.
Bootstrap support for Q9X1K0 as seed ortholog is 100%.

Group of orthologs #151. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:129 T.maritima:129

D3BRG1              	100.00%		Q9X0P9              	100.00%
Bootstrap support for D3BRG1 as seed ortholog is 100%.
Bootstrap support for Q9X0P9 as seed ortholog is 100%.

Group of orthologs #152. Best score 128 bits
Score difference with first non-orthologous sequence - P.pallidum:7 T.maritima:128

D3BFU9              	100.00%		Q9WZR4              	100.00%
D3BFU8              	21.52%		
Bootstrap support for D3BFU9 as seed ortholog is 60%.
Alternative seed ortholog is D3BEP4 (7 bits away from this cluster)
Bootstrap support for Q9WZR4 as seed ortholog is 100%.

Group of orthologs #153. Best score 128 bits
Score difference with first non-orthologous sequence - P.pallidum:7 T.maritima:128

D3BGD2              	100.00%		Q9WZ08              	100.00%
Bootstrap support for D3BGD2 as seed ortholog is 49%.
Alternative seed ortholog is D3BTG9 (7 bits away from this cluster)
Bootstrap support for Q9WZ08 as seed ortholog is 100%.

Group of orthologs #154. Best score 126 bits
Score difference with first non-orthologous sequence - P.pallidum:126 T.maritima:126

D3BCX3              	100.00%		Q9WZS8              	100.00%
Bootstrap support for D3BCX3 as seed ortholog is 100%.
Bootstrap support for Q9WZS8 as seed ortholog is 100%.

Group of orthologs #155. Best score 126 bits
Score difference with first non-orthologous sequence - P.pallidum:7 T.maritima:126

D3BI40              	100.00%		Q9X1F1              	100.00%
Bootstrap support for D3BI40 as seed ortholog is 56%.
Alternative seed ortholog is D3BVF6 (7 bits away from this cluster)
Bootstrap support for Q9X1F1 as seed ortholog is 100%.

Group of orthologs #156. Best score 126 bits
Score difference with first non-orthologous sequence - P.pallidum:126 T.maritima:126

D3BJG8              	100.00%		Q9X0H8              	100.00%
Bootstrap support for D3BJG8 as seed ortholog is 100%.
Bootstrap support for Q9X0H8 as seed ortholog is 100%.

Group of orthologs #157. Best score 125 bits
Score difference with first non-orthologous sequence - P.pallidum:125 T.maritima:125

D3BMJ3              	100.00%		Q9WZD5              	100.00%
Bootstrap support for D3BMJ3 as seed ortholog is 100%.
Bootstrap support for Q9WZD5 as seed ortholog is 100%.

Group of orthologs #158. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 T.maritima:121

D3B416              	100.00%		Q9X1G5              	100.00%
Bootstrap support for D3B416 as seed ortholog is 100%.
Bootstrap support for Q9X1G5 as seed ortholog is 100%.

Group of orthologs #159. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 T.maritima:119

D3AWU6              	100.00%		Q9X0L5              	100.00%
D3AWU5              	38.86%		
Bootstrap support for D3AWU6 as seed ortholog is 100%.
Bootstrap support for Q9X0L5 as seed ortholog is 100%.

Group of orthologs #160. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 T.maritima:119

D3BV33              	100.00%		Q9X158              	100.00%
                    	       		Q9WYH7              	8.93%
Bootstrap support for D3BV33 as seed ortholog is 100%.
Bootstrap support for Q9X158 as seed ortholog is 100%.

Group of orthologs #161. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:49 T.maritima:58

D3B7E2              	100.00%		Q9WZX0              	100.00%
Bootstrap support for D3B7E2 as seed ortholog is 95%.
Bootstrap support for Q9WZX0 as seed ortholog is 98%.

Group of orthologs #162. Best score 118 bits
Score difference with first non-orthologous sequence - P.pallidum:118 T.maritima:118

D3B1H2              	100.00%		Q9WZI0              	100.00%
Bootstrap support for D3B1H2 as seed ortholog is 100%.
Bootstrap support for Q9WZI0 as seed ortholog is 100%.

Group of orthologs #163. Best score 118 bits
Score difference with first non-orthologous sequence - P.pallidum:118 T.maritima:118

D3BPW7              	100.00%		Q9WYU3              	100.00%
Bootstrap support for D3BPW7 as seed ortholog is 100%.
Bootstrap support for Q9WYU3 as seed ortholog is 100%.

Group of orthologs #164. Best score 117 bits
Score difference with first non-orthologous sequence - P.pallidum:117 T.maritima:117

D3BEZ0              	100.00%		Q9X215              	100.00%
Bootstrap support for D3BEZ0 as seed ortholog is 100%.
Bootstrap support for Q9X215 as seed ortholog is 100%.

Group of orthologs #165. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:116 T.maritima:116

D3BAX5              	100.00%		Q9WZS2              	100.00%
D3BIJ6              	31.87%		
Bootstrap support for D3BAX5 as seed ortholog is 100%.
Bootstrap support for Q9WZS2 as seed ortholog is 100%.

Group of orthologs #166. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:37 T.maritima:10

D3BCL5              	100.00%		Q9WZW6              	100.00%
D3AZL0              	14.57%		
Bootstrap support for D3BCL5 as seed ortholog is 90%.
Bootstrap support for Q9WZW6 as seed ortholog is 62%.
Alternative seed ortholog is Q9WY82 (10 bits away from this cluster)

Group of orthologs #167. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:116 T.maritima:116

D3AXJ0              	100.00%		Q9WXZ2              	100.00%
Bootstrap support for D3AXJ0 as seed ortholog is 100%.
Bootstrap support for Q9WXZ2 as seed ortholog is 100%.

Group of orthologs #168. Best score 115 bits
Score difference with first non-orthologous sequence - P.pallidum:115 T.maritima:115

D3AZG0              	100.00%		Q9X2H9              	100.00%
Bootstrap support for D3AZG0 as seed ortholog is 100%.
Bootstrap support for Q9X2H9 as seed ortholog is 100%.

Group of orthologs #169. Best score 115 bits
Score difference with first non-orthologous sequence - P.pallidum:115 T.maritima:115

D3B6D9              	100.00%		Q9X167              	100.00%
Bootstrap support for D3B6D9 as seed ortholog is 100%.
Bootstrap support for Q9X167 as seed ortholog is 100%.

Group of orthologs #170. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 T.maritima:114

D3BQU8              	100.00%		Q9X0U1              	100.00%
Bootstrap support for D3BQU8 as seed ortholog is 100%.
Bootstrap support for Q9X0U1 as seed ortholog is 100%.

Group of orthologs #171. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 T.maritima:113

D3BJB2              	100.00%		Q9WXS3              	100.00%
Bootstrap support for D3BJB2 as seed ortholog is 100%.
Bootstrap support for Q9WXS3 as seed ortholog is 100%.

Group of orthologs #172. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 T.maritima:113

D3BM02              	100.00%		Q9WZV2              	100.00%
Bootstrap support for D3BM02 as seed ortholog is 100%.
Bootstrap support for Q9WZV2 as seed ortholog is 100%.

Group of orthologs #173. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 T.maritima:113

D3BT29              	100.00%		Q9WYU8              	100.00%
Bootstrap support for D3BT29 as seed ortholog is 100%.
Bootstrap support for Q9WYU8 as seed ortholog is 100%.

Group of orthologs #174. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 T.maritima:113

D3BTL6              	100.00%		Q9X1L6              	100.00%
Bootstrap support for D3BTL6 as seed ortholog is 100%.
Bootstrap support for Q9X1L6 as seed ortholog is 100%.

Group of orthologs #175. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 T.maritima:113

D3BVI7              	100.00%		Q9X1N3              	100.00%
Bootstrap support for D3BVI7 as seed ortholog is 100%.
Bootstrap support for Q9X1N3 as seed ortholog is 100%.

Group of orthologs #176. Best score 112 bits
Score difference with first non-orthologous sequence - P.pallidum:112 T.maritima:112

D3B4F8              	100.00%		Q9WZV0              	100.00%
Bootstrap support for D3B4F8 as seed ortholog is 100%.
Bootstrap support for Q9WZV0 as seed ortholog is 100%.

Group of orthologs #177. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 T.maritima:111

D3AYL6              	100.00%		Q9WY49              	100.00%
Bootstrap support for D3AYL6 as seed ortholog is 100%.
Bootstrap support for Q9WY49 as seed ortholog is 100%.

Group of orthologs #178. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:61 T.maritima:64

D3B7V9              	100.00%		Q9X055              	100.00%
Bootstrap support for D3B7V9 as seed ortholog is 93%.
Bootstrap support for Q9X055 as seed ortholog is 94%.

Group of orthologs #179. Best score 110 bits
Score difference with first non-orthologous sequence - P.pallidum:110 T.maritima:110

D3AVZ8              	100.00%		Q9WY28              	100.00%
Bootstrap support for D3AVZ8 as seed ortholog is 100%.
Bootstrap support for Q9WY28 as seed ortholog is 100%.

Group of orthologs #180. Best score 109 bits
Score difference with first non-orthologous sequence - P.pallidum:109 T.maritima:109

D3BFD7              	100.00%		P38510              	100.00%
Bootstrap support for D3BFD7 as seed ortholog is 100%.
Bootstrap support for P38510 as seed ortholog is 100%.

Group of orthologs #181. Best score 108 bits
Score difference with first non-orthologous sequence - P.pallidum:108 T.maritima:108

D3BPH0              	100.00%		Q9WZ31              	100.00%
D3BKW6              	25.31%		
Bootstrap support for D3BPH0 as seed ortholog is 100%.
Bootstrap support for Q9WZ31 as seed ortholog is 100%.

Group of orthologs #182. Best score 108 bits
Score difference with first non-orthologous sequence - P.pallidum:108 T.maritima:108

D3BSK0              	100.00%		Q9X1U6              	100.00%
Bootstrap support for D3BSK0 as seed ortholog is 100%.
Bootstrap support for Q9X1U6 as seed ortholog is 100%.

Group of orthologs #183. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:26 T.maritima:106

D3BNI5              	100.00%		Q9X1R0              	100.00%
Bootstrap support for D3BNI5 as seed ortholog is 79%.
Bootstrap support for Q9X1R0 as seed ortholog is 100%.

Group of orthologs #184. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 T.maritima:106

D3BMX7              	100.00%		Q9X2F4              	100.00%
Bootstrap support for D3BMX7 as seed ortholog is 100%.
Bootstrap support for Q9X2F4 as seed ortholog is 100%.

Group of orthologs #185. Best score 105 bits
Score difference with first non-orthologous sequence - P.pallidum:105 T.maritima:105

D3BGQ4              	100.00%		Q9X1J0              	100.00%
Bootstrap support for D3BGQ4 as seed ortholog is 100%.
Bootstrap support for Q9X1J0 as seed ortholog is 100%.

Group of orthologs #186. Best score 105 bits
Score difference with first non-orthologous sequence - P.pallidum:105 T.maritima:105

D3BUD8              	100.00%		Q9X283              	100.00%
Bootstrap support for D3BUD8 as seed ortholog is 100%.
Bootstrap support for Q9X283 as seed ortholog is 100%.

Group of orthologs #187. Best score 104 bits
Score difference with first non-orthologous sequence - P.pallidum:104 T.maritima:104

D3BEI5              	100.00%		P38516              	100.00%
Bootstrap support for D3BEI5 as seed ortholog is 100%.
Bootstrap support for P38516 as seed ortholog is 100%.

Group of orthologs #188. Best score 104 bits
Score difference with first non-orthologous sequence - P.pallidum:104 T.maritima:104

D3BQQ8              	100.00%		Q9WZI9              	100.00%
Bootstrap support for D3BQQ8 as seed ortholog is 100%.
Bootstrap support for Q9WZI9 as seed ortholog is 100%.

Group of orthologs #189. Best score 102 bits
Score difference with first non-orthologous sequence - P.pallidum:36 T.maritima:102

D3B4F3              	100.00%		Q9WYR7              	100.00%
Bootstrap support for D3B4F3 as seed ortholog is 80%.
Bootstrap support for Q9WYR7 as seed ortholog is 100%.

Group of orthologs #190. Best score 102 bits
Score difference with first non-orthologous sequence - P.pallidum:102 T.maritima:102

D3BM80              	100.00%		Q9WZX9              	100.00%
Bootstrap support for D3BM80 as seed ortholog is 100%.
Bootstrap support for Q9WZX9 as seed ortholog is 100%.

Group of orthologs #191. Best score 100 bits
Score difference with first non-orthologous sequence - P.pallidum:100 T.maritima:51

D3AVG7              	100.00%		Q9WY40              	100.00%
Bootstrap support for D3AVG7 as seed ortholog is 100%.
Bootstrap support for Q9WY40 as seed ortholog is 91%.

Group of orthologs #192. Best score 100 bits
Score difference with first non-orthologous sequence - P.pallidum:100 T.maritima:100

D3B2R5              	100.00%		Q9WYK1              	100.00%
Bootstrap support for D3B2R5 as seed ortholog is 100%.
Bootstrap support for Q9WYK1 as seed ortholog is 100%.

Group of orthologs #193. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:99 T.maritima:99

D3BM32              	100.00%		Q9WY58              	100.00%
Bootstrap support for D3BM32 as seed ortholog is 100%.
Bootstrap support for Q9WY58 as seed ortholog is 100%.

Group of orthologs #194. Best score 98 bits
Score difference with first non-orthologous sequence - P.pallidum:98 T.maritima:98

D3B4B9              	100.00%		Q9WZH4              	100.00%
Bootstrap support for D3B4B9 as seed ortholog is 100%.
Bootstrap support for Q9WZH4 as seed ortholog is 100%.

Group of orthologs #195. Best score 98 bits
Score difference with first non-orthologous sequence - P.pallidum:98 T.maritima:98

D3BD13              	100.00%		Q9WZV1              	100.00%
Bootstrap support for D3BD13 as seed ortholog is 100%.
Bootstrap support for Q9WZV1 as seed ortholog is 100%.

Group of orthologs #196. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 T.maritima:97

D3B573              	100.00%		P56838              	100.00%
Bootstrap support for D3B573 as seed ortholog is 100%.
Bootstrap support for P56838 as seed ortholog is 100%.

Group of orthologs #197. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 T.maritima:97

D3BIZ8              	100.00%		Q9X1B4              	100.00%
Bootstrap support for D3BIZ8 as seed ortholog is 100%.
Bootstrap support for Q9X1B4 as seed ortholog is 100%.

Group of orthologs #198. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 T.maritima:96

D3B538              	100.00%		Q9X1A4              	100.00%
Bootstrap support for D3B538 as seed ortholog is 100%.
Bootstrap support for Q9X1A4 as seed ortholog is 100%.

Group of orthologs #199. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 T.maritima:96

D3BPL5              	100.00%		Q9WZK7              	100.00%
Bootstrap support for D3BPL5 as seed ortholog is 100%.
Bootstrap support for Q9WZK7 as seed ortholog is 100%.

Group of orthologs #200. Best score 95 bits
Score difference with first non-orthologous sequence - P.pallidum:95 T.maritima:95

D3B358              	100.00%		Q9X1L4              	100.00%
Bootstrap support for D3B358 as seed ortholog is 100%.
Bootstrap support for Q9X1L4 as seed ortholog is 100%.

Group of orthologs #201. Best score 95 bits
Score difference with first non-orthologous sequence - P.pallidum:95 T.maritima:95

D3BHL7              	100.00%		Q9X253              	100.00%
Bootstrap support for D3BHL7 as seed ortholog is 100%.
Bootstrap support for Q9X253 as seed ortholog is 100%.

Group of orthologs #202. Best score 95 bits
Score difference with first non-orthologous sequence - P.pallidum:95 T.maritima:95

D3BK14              	100.00%		Q9X0X5              	100.00%
Bootstrap support for D3BK14 as seed ortholog is 100%.
Bootstrap support for Q9X0X5 as seed ortholog is 100%.

Group of orthologs #203. Best score 94 bits
Score difference with first non-orthologous sequence - P.pallidum:4 T.maritima:94

D3B604              	100.00%		Q9WZB9              	100.00%
Bootstrap support for D3B604 as seed ortholog is 55%.
Alternative seed ortholog is D3BA43 (4 bits away from this cluster)
Bootstrap support for Q9WZB9 as seed ortholog is 100%.

Group of orthologs #204. Best score 94 bits
Score difference with first non-orthologous sequence - P.pallidum:94 T.maritima:94

D3BIE7              	100.00%		Q9X0Q5              	100.00%
Bootstrap support for D3BIE7 as seed ortholog is 100%.
Bootstrap support for Q9X0Q5 as seed ortholog is 100%.

Group of orthologs #205. Best score 93 bits
Score difference with first non-orthologous sequence - P.pallidum:93 T.maritima:93

D3B3W9              	100.00%		Q9WZF2              	100.00%
D3B3A5              	20.62%		
D3BKC5              	18.18%		
Bootstrap support for D3B3W9 as seed ortholog is 100%.
Bootstrap support for Q9WZF2 as seed ortholog is 100%.

Group of orthologs #206. Best score 93 bits
Score difference with first non-orthologous sequence - P.pallidum:93 T.maritima:93

D3B5K0              	100.00%		Q9X0Y0              	100.00%
Bootstrap support for D3B5K0 as seed ortholog is 100%.
Bootstrap support for Q9X0Y0 as seed ortholog is 100%.

Group of orthologs #207. Best score 93 bits
Score difference with first non-orthologous sequence - P.pallidum:93 T.maritima:93

D3B6X7              	100.00%		Q9X1L1              	100.00%
Bootstrap support for D3B6X7 as seed ortholog is 100%.
Bootstrap support for Q9X1L1 as seed ortholog is 100%.

Group of orthologs #208. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:40 T.maritima:3

D3BPZ9              	100.00%		Q9WYE9              	100.00%
                    	       		Q9X0A1              	11.43%
                    	       		Q9X265              	9.80%
Bootstrap support for D3BPZ9 as seed ortholog is 84%.
Bootstrap support for Q9WYE9 as seed ortholog is 50%.
Alternative seed ortholog is Q9X0R5 (3 bits away from this cluster)

Group of orthologs #209. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:1 T.maritima:92

D3AYM4              	100.00%		Q9WXV1              	100.00%
Bootstrap support for D3AYM4 as seed ortholog is 45%.
Alternative seed ortholog is D3BAF6 (1 bits away from this cluster)
Bootstrap support for Q9WXV1 as seed ortholog is 100%.

Group of orthologs #210. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 T.maritima:92

D3BBK8              	100.00%		Q9X0H9              	100.00%
Bootstrap support for D3BBK8 as seed ortholog is 100%.
Bootstrap support for Q9X0H9 as seed ortholog is 100%.

Group of orthologs #211. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 T.maritima:92

D3BL83              	100.00%		Q9WYD1              	100.00%
Bootstrap support for D3BL83 as seed ortholog is 100%.
Bootstrap support for Q9WYD1 as seed ortholog is 100%.

Group of orthologs #212. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:91 T.maritima:91

D3BQJ2              	100.00%		Q9X107              	100.00%
Bootstrap support for D3BQJ2 as seed ortholog is 100%.
Bootstrap support for Q9X107 as seed ortholog is 100%.

Group of orthologs #213. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 T.maritima:90

D3BG91              	100.00%		Q9WYN2              	100.00%
Bootstrap support for D3BG91 as seed ortholog is 100%.
Bootstrap support for Q9WYN2 as seed ortholog is 100%.

Group of orthologs #214. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 T.maritima:90

D3BPA7              	100.00%		Q9X223              	100.00%
Bootstrap support for D3BPA7 as seed ortholog is 100%.
Bootstrap support for Q9X223 as seed ortholog is 100%.

Group of orthologs #215. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 T.maritima:90

D3BUH4              	100.00%		Q9WYV8              	100.00%
Bootstrap support for D3BUH4 as seed ortholog is 100%.
Bootstrap support for Q9WYV8 as seed ortholog is 100%.

Group of orthologs #216. Best score 89 bits
Score difference with first non-orthologous sequence - P.pallidum:35 T.maritima:89

D3BMY5              	100.00%		Q9X244              	100.00%
Bootstrap support for D3BMY5 as seed ortholog is 92%.
Bootstrap support for Q9X244 as seed ortholog is 100%.

Group of orthologs #217. Best score 88 bits
Score difference with first non-orthologous sequence - P.pallidum:35 T.maritima:88

D3B1N1              	100.00%		Q9X0N8              	100.00%
Bootstrap support for D3B1N1 as seed ortholog is 95%.
Bootstrap support for Q9X0N8 as seed ortholog is 100%.

Group of orthologs #218. Best score 88 bits
Score difference with first non-orthologous sequence - P.pallidum:88 T.maritima:88

D3BED2              	100.00%		Q9X255              	100.00%
Bootstrap support for D3BED2 as seed ortholog is 100%.
Bootstrap support for Q9X255 as seed ortholog is 100%.

Group of orthologs #219. Best score 87 bits
Score difference with first non-orthologous sequence - P.pallidum:87 T.maritima:87

D3B4U0              	100.00%		Q9WZ47              	100.00%
Bootstrap support for D3B4U0 as seed ortholog is 100%.
Bootstrap support for Q9WZ47 as seed ortholog is 100%.

Group of orthologs #220. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 T.maritima:86

D3B0K7              	100.00%		Q9WYZ8              	100.00%
Bootstrap support for D3B0K7 as seed ortholog is 100%.
Bootstrap support for Q9WYZ8 as seed ortholog is 100%.

Group of orthologs #221. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 T.maritima:86

D3BLA2              	100.00%		Q9X1Y3              	100.00%
Bootstrap support for D3BLA2 as seed ortholog is 100%.
Bootstrap support for Q9X1Y3 as seed ortholog is 100%.

Group of orthologs #222. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:85 T.maritima:85

D3BMW8              	100.00%		Q9WYU6              	100.00%
Bootstrap support for D3BMW8 as seed ortholog is 100%.
Bootstrap support for Q9WYU6 as seed ortholog is 100%.

Group of orthologs #223. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:85 T.maritima:85

D3BRK2              	100.00%		Q9X0C2              	100.00%
Bootstrap support for D3BRK2 as seed ortholog is 100%.
Bootstrap support for Q9X0C2 as seed ortholog is 100%.

Group of orthologs #224. Best score 84 bits
Score difference with first non-orthologous sequence - P.pallidum:84 T.maritima:84

D3BUE5              	100.00%		Q9X1S8              	100.00%
Bootstrap support for D3BUE5 as seed ortholog is 100%.
Bootstrap support for Q9X1S8 as seed ortholog is 100%.

Group of orthologs #225. Best score 83 bits
Score difference with first non-orthologous sequence - P.pallidum:83 T.maritima:83

D3BB09              	100.00%		Q56308              	100.00%
Bootstrap support for D3BB09 as seed ortholog is 100%.
Bootstrap support for Q56308 as seed ortholog is 100%.

Group of orthologs #226. Best score 83 bits
Score difference with first non-orthologous sequence - P.pallidum:13 T.maritima:83

D3BE02              	100.00%		Q9X171              	100.00%
Bootstrap support for D3BE02 as seed ortholog is 63%.
Alternative seed ortholog is D3BVE5 (13 bits away from this cluster)
Bootstrap support for Q9X171 as seed ortholog is 100%.

Group of orthologs #227. Best score 83 bits
Score difference with first non-orthologous sequence - P.pallidum:83 T.maritima:83

D3BMU4              	100.00%		Q9X024              	100.00%
Bootstrap support for D3BMU4 as seed ortholog is 100%.
Bootstrap support for Q9X024 as seed ortholog is 100%.

Group of orthologs #228. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 T.maritima:82

D3BRS7              	100.00%		Q9X1E3              	100.00%
D3BQ27              	32.49%		
D3B667              	23.48%		
D3BAX0              	5.24%		
Bootstrap support for D3BRS7 as seed ortholog is 100%.
Bootstrap support for Q9X1E3 as seed ortholog is 100%.

Group of orthologs #229. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 T.maritima:82

D3B2T4              	100.00%		Q9WZ12              	100.00%
Bootstrap support for D3B2T4 as seed ortholog is 100%.
Bootstrap support for Q9WZ12 as seed ortholog is 100%.

Group of orthologs #230. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 T.maritima:81

D3BRX9              	100.00%		O51934              	100.00%
                    	       		P46799              	5.60%
Bootstrap support for D3BRX9 as seed ortholog is 100%.
Bootstrap support for O51934 as seed ortholog is 100%.

Group of orthologs #231. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 T.maritima:81

D3B6G8              	100.00%		Q9X1J2              	100.00%
Bootstrap support for D3B6G8 as seed ortholog is 100%.
Bootstrap support for Q9X1J2 as seed ortholog is 100%.

Group of orthologs #232. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 T.maritima:81

D3BA49              	100.00%		Q9WZW0              	100.00%
Bootstrap support for D3BA49 as seed ortholog is 100%.
Bootstrap support for Q9WZW0 as seed ortholog is 100%.

Group of orthologs #233. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 T.maritima:81

D3BFH1              	100.00%		Q9X1A7              	100.00%
Bootstrap support for D3BFH1 as seed ortholog is 100%.
Bootstrap support for Q9X1A7 as seed ortholog is 100%.

Group of orthologs #234. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 T.maritima:81

D3BNU2              	100.00%		Q9WZM6              	100.00%
Bootstrap support for D3BNU2 as seed ortholog is 100%.
Bootstrap support for Q9WZM6 as seed ortholog is 100%.

Group of orthologs #235. Best score 80 bits
Score difference with first non-orthologous sequence - P.pallidum:18 T.maritima:80

D3B0Z6              	100.00%		Q9WZN7              	100.00%
Bootstrap support for D3B0Z6 as seed ortholog is 75%.
Bootstrap support for Q9WZN7 as seed ortholog is 100%.

Group of orthologs #236. Best score 80 bits
Score difference with first non-orthologous sequence - P.pallidum:80 T.maritima:80

D3BEF1              	100.00%		Q9WYJ9              	100.00%
Bootstrap support for D3BEF1 as seed ortholog is 100%.
Bootstrap support for Q9WYJ9 as seed ortholog is 100%.

Group of orthologs #237. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:8 T.maritima:79

D3AWT6              	100.00%		Q9X2G1              	100.00%
D3BHT9              	9.76%		
D3B1H0              	9.62%		
D3B3C8              	8.51%		
D3AYY7              	8.09%		
D3BUW8              	7.81%		
D3BVR5              	7.25%		
D3B0J9              	5.72%		
D3BE97              	5.02%		
Bootstrap support for D3AWT6 as seed ortholog is 62%.
Alternative seed ortholog is D3BGA4 (8 bits away from this cluster)
Bootstrap support for Q9X2G1 as seed ortholog is 100%.

Group of orthologs #238. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:17 T.maritima:79

D3BV73              	100.00%		Q9WYP3              	100.00%
D3B8N8              	54.37%		
D3BG57              	46.12%		
Bootstrap support for D3BV73 as seed ortholog is 68%.
Alternative seed ortholog is D3AWA9 (17 bits away from this cluster)
Bootstrap support for Q9WYP3 as seed ortholog is 100%.

Group of orthologs #239. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:79 T.maritima:79

D3AW94              	100.00%		Q9WXZ9              	100.00%
D3AW92              	11.65%		
Bootstrap support for D3AW94 as seed ortholog is 100%.
Bootstrap support for Q9WXZ9 as seed ortholog is 100%.

Group of orthologs #240. Best score 78 bits
Score difference with first non-orthologous sequence - P.pallidum:78 T.maritima:78

D3AX40              	100.00%		Q9X1T9              	100.00%
Bootstrap support for D3AX40 as seed ortholog is 100%.
Bootstrap support for Q9X1T9 as seed ortholog is 100%.

Group of orthologs #241. Best score 78 bits
Score difference with first non-orthologous sequence - P.pallidum:19 T.maritima:78

D3B498              	100.00%		Q9WYK7              	100.00%
Bootstrap support for D3B498 as seed ortholog is 83%.
Bootstrap support for Q9WYK7 as seed ortholog is 100%.

Group of orthologs #242. Best score 78 bits
Score difference with first non-orthologous sequence - P.pallidum:78 T.maritima:78

D3BAS9              	100.00%		Q9X260              	100.00%
Bootstrap support for D3BAS9 as seed ortholog is 100%.
Bootstrap support for Q9X260 as seed ortholog is 100%.

Group of orthologs #243. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:19 T.maritima:77

D3AW52              	100.00%		Q9X1Z4              	100.00%
D3BJJ8              	47.77%		
D3B307              	45.60%		
D3B3V0              	23.28%		
Bootstrap support for D3AW52 as seed ortholog is 70%.
Alternative seed ortholog is D3AXB9 (19 bits away from this cluster)
Bootstrap support for Q9X1Z4 as seed ortholog is 100%.

Group of orthologs #244. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 T.maritima:77

D3AW87              	100.00%		Q9X0R3              	100.00%
Bootstrap support for D3AW87 as seed ortholog is 100%.
Bootstrap support for Q9X0R3 as seed ortholog is 100%.

Group of orthologs #245. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 T.maritima:77

D3BMN8              	100.00%		Q9WZS9              	100.00%
Bootstrap support for D3BMN8 as seed ortholog is 100%.
Bootstrap support for Q9WZS9 as seed ortholog is 100%.

Group of orthologs #246. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 T.maritima:77

D3BMX0              	100.00%		Q9WZL2              	100.00%
Bootstrap support for D3BMX0 as seed ortholog is 100%.
Bootstrap support for Q9WZL2 as seed ortholog is 100%.

Group of orthologs #247. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 T.maritima:77

D3BPW9              	100.00%		Q9X1A5              	100.00%
Bootstrap support for D3BPW9 as seed ortholog is 100%.
Bootstrap support for Q9X1A5 as seed ortholog is 100%.

Group of orthologs #248. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 T.maritima:77

D3BUL3              	100.00%		Q9X0I0              	100.00%
Bootstrap support for D3BUL3 as seed ortholog is 100%.
Bootstrap support for Q9X0I0 as seed ortholog is 100%.

Group of orthologs #249. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 T.maritima:76

D3BSN3              	100.00%		Q9WY08              	100.00%
                    	       		Q9X1M1              	7.42%
Bootstrap support for D3BSN3 as seed ortholog is 100%.
Bootstrap support for Q9WY08 as seed ortholog is 100%.

Group of orthologs #250. Best score 75 bits
Score difference with first non-orthologous sequence - P.pallidum:75 T.maritima:75

D3B2W2              	100.00%		Q9X1G2              	100.00%
D3AWF9              	11.23%		
D3BA83              	10.93%		
D3BSG3              	10.28%		
D3BEH4              	10.10%		
D3B5X2              	9.80%		
D3B6C6              	9.51%		
D3BK81              	9.51%		
D3BK57              	6.95%		
D3B9K7              	5.82%		
D3B2U5              	5.70%		
D3B6E1              	5.11%		
D3B229              	5.11%		
Bootstrap support for D3B2W2 as seed ortholog is 100%.
Bootstrap support for Q9X1G2 as seed ortholog is 100%.

Group of orthologs #251. Best score 75 bits
Score difference with first non-orthologous sequence - P.pallidum:75 T.maritima:75

D3BK69              	100.00%		Q9X2A7              	100.00%
Bootstrap support for D3BK69 as seed ortholog is 100%.
Bootstrap support for Q9X2A7 as seed ortholog is 100%.

Group of orthologs #252. Best score 73 bits
Score difference with first non-orthologous sequence - P.pallidum:9 T.maritima:73

D3BQB6              	100.00%		G4FEX7              	100.00%
D3BQB2              	34.34%		
D3B4H8              	10.20%		
D3BVF7              	8.59%		
D3BG32              	5.25%		
Bootstrap support for D3BQB6 as seed ortholog is 67%.
Alternative seed ortholog is D3BGZ6 (9 bits away from this cluster)
Bootstrap support for G4FEX7 as seed ortholog is 100%.

Group of orthologs #253. Best score 73 bits
Score difference with first non-orthologous sequence - P.pallidum:7 T.maritima:73

D3B7F1              	100.00%		Q9X0M4              	100.00%
Bootstrap support for D3B7F1 as seed ortholog is 63%.
Alternative seed ortholog is D3BJ92 (7 bits away from this cluster)
Bootstrap support for Q9X0M4 as seed ortholog is 100%.

Group of orthologs #254. Best score 73 bits
Score difference with first non-orthologous sequence - P.pallidum:73 T.maritima:73

D3BPD1              	100.00%		Q9X1D6              	100.00%
Bootstrap support for D3BPD1 as seed ortholog is 100%.
Bootstrap support for Q9X1D6 as seed ortholog is 100%.

Group of orthologs #255. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 T.maritima:72

D3B2V3              	100.00%		Q9X085              	100.00%
D3BV13              	8.52%		
Bootstrap support for D3B2V3 as seed ortholog is 100%.
Bootstrap support for Q9X085 as seed ortholog is 100%.

Group of orthologs #256. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 T.maritima:72

D3BL70              	100.00%		Q9X1Q8              	100.00%
Bootstrap support for D3BL70 as seed ortholog is 100%.
Bootstrap support for Q9X1Q8 as seed ortholog is 100%.

Group of orthologs #257. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 T.maritima:71

D3BJ97              	100.00%		Q9WXP5              	100.00%
Bootstrap support for D3BJ97 as seed ortholog is 100%.
Bootstrap support for Q9WXP5 as seed ortholog is 100%.

Group of orthologs #258. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 T.maritima:71

D3BMY0              	100.00%		Q9X077              	100.00%
Bootstrap support for D3BMY0 as seed ortholog is 100%.
Bootstrap support for Q9X077 as seed ortholog is 100%.

Group of orthologs #259. Best score 70 bits
Score difference with first non-orthologous sequence - P.pallidum:70 T.maritima:70

D3BKA5              	100.00%		Q9WXU2              	100.00%
Bootstrap support for D3BKA5 as seed ortholog is 100%.
Bootstrap support for Q9WXU2 as seed ortholog is 100%.

Group of orthologs #260. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 T.maritima:69

D3AW08              	100.00%		Q9WYQ9              	100.00%
D3B435              	77.46%		
D3BGN9              	58.16%		
Bootstrap support for D3AW08 as seed ortholog is 100%.
Bootstrap support for Q9WYQ9 as seed ortholog is 100%.

Group of orthologs #261. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 T.maritima:69

D3B3D8              	100.00%		Q9X0I3              	100.00%
Bootstrap support for D3B3D8 as seed ortholog is 100%.
Bootstrap support for Q9X0I3 as seed ortholog is 100%.

Group of orthologs #262. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 T.maritima:69

D3B615              	100.00%		Q9X1I4              	100.00%
Bootstrap support for D3B615 as seed ortholog is 100%.
Bootstrap support for Q9X1I4 as seed ortholog is 100%.

Group of orthologs #263. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 T.maritima:69

D3BP66              	100.00%		Q9WZV4              	100.00%
Bootstrap support for D3BP66 as seed ortholog is 100%.
Bootstrap support for Q9WZV4 as seed ortholog is 100%.

Group of orthologs #264. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:68 T.maritima:68

D3BLP1              	100.00%		Q9WY27              	100.00%
D3BSH6              	16.74%		
Bootstrap support for D3BLP1 as seed ortholog is 100%.
Bootstrap support for Q9WY27 as seed ortholog is 100%.

Group of orthologs #265. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:68 T.maritima:68

D3BF15              	100.00%		Q9WZK3              	100.00%
Bootstrap support for D3BF15 as seed ortholog is 100%.
Bootstrap support for Q9WZK3 as seed ortholog is 100%.

Group of orthologs #266. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:68 T.maritima:68

D3BTV2              	100.00%		P38517              	100.00%
Bootstrap support for D3BTV2 as seed ortholog is 100%.
Bootstrap support for P38517 as seed ortholog is 100%.

Group of orthologs #267. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 T.maritima:67

D3BB83              	100.00%		Q56313              	100.00%
D3BI12              	37.05%		
Bootstrap support for D3BB83 as seed ortholog is 100%.
Bootstrap support for Q56313 as seed ortholog is 100%.

Group of orthologs #268. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 T.maritima:67

D3BD56              	100.00%		Q9WZU9              	100.00%
Bootstrap support for D3BD56 as seed ortholog is 100%.
Bootstrap support for Q9WZU9 as seed ortholog is 100%.

Group of orthologs #269. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:66 T.maritima:66

D3BT07              	100.00%		Q9WXM1              	100.00%
Bootstrap support for D3BT07 as seed ortholog is 100%.
Bootstrap support for Q9WXM1 as seed ortholog is 100%.

Group of orthologs #270. Best score 64 bits
Score difference with first non-orthologous sequence - P.pallidum:64 T.maritima:64

D3BLP5              	100.00%		Q9WYH0              	100.00%
D3B996              	22.73%		
Bootstrap support for D3BLP5 as seed ortholog is 100%.
Bootstrap support for Q9WYH0 as seed ortholog is 100%.

Group of orthologs #271. Best score 64 bits
Score difference with first non-orthologous sequence - P.pallidum:64 T.maritima:64

D3BEM8              	100.00%		Q9WY06              	100.00%
Bootstrap support for D3BEM8 as seed ortholog is 100%.
Bootstrap support for Q9WY06 as seed ortholog is 100%.

Group of orthologs #272. Best score 64 bits
Score difference with first non-orthologous sequence - P.pallidum:64 T.maritima:64

D3BQH4              	100.00%		Q9WXY6              	100.00%
Bootstrap support for D3BQH4 as seed ortholog is 100%.
Bootstrap support for Q9WXY6 as seed ortholog is 100%.

Group of orthologs #273. Best score 62 bits
Score difference with first non-orthologous sequence - P.pallidum:62 T.maritima:62

D3B1K3              	100.00%		Q9X1I5              	100.00%
Bootstrap support for D3B1K3 as seed ortholog is 100%.
Bootstrap support for Q9X1I5 as seed ortholog is 100%.

Group of orthologs #274. Best score 62 bits
Score difference with first non-orthologous sequence - P.pallidum:62 T.maritima:62

D3B6R3              	100.00%		Q9X219              	100.00%
Bootstrap support for D3B6R3 as seed ortholog is 100%.
Bootstrap support for Q9X219 as seed ortholog is 100%.

Group of orthologs #275. Best score 61 bits
Score difference with first non-orthologous sequence - P.pallidum:61 T.maritima:61

D3B2M2              	100.00%		Q60034              	100.00%
D3B6I5              	25.80%		
Bootstrap support for D3B2M2 as seed ortholog is 100%.
Bootstrap support for Q60034 as seed ortholog is 100%.

Group of orthologs #276. Best score 61 bits
Score difference with first non-orthologous sequence - P.pallidum:61 T.maritima:61

D3B3Q2              	100.00%		Q9WYT9              	100.00%
                    	       		Q56312              	11.43%
Bootstrap support for D3B3Q2 as seed ortholog is 100%.
Bootstrap support for Q9WYT9 as seed ortholog is 100%.

Group of orthologs #277. Best score 61 bits
Score difference with first non-orthologous sequence - P.pallidum:61 T.maritima:61

D3BHS9              	100.00%		Q9WZ23              	100.00%
                    	       		Q9WZ22              	14.36%
Bootstrap support for D3BHS9 as seed ortholog is 100%.
Bootstrap support for Q9WZ23 as seed ortholog is 100%.

Group of orthologs #278. Best score 60 bits
Score difference with first non-orthologous sequence - P.pallidum:60 T.maritima:60

D3BEC7              	100.00%		Q9WYP5              	100.00%
                    	       		Q9WZ54              	8.36%
Bootstrap support for D3BEC7 as seed ortholog is 100%.
Bootstrap support for Q9WYP5 as seed ortholog is 100%.

Group of orthologs #279. Best score 60 bits
Score difference with first non-orthologous sequence - P.pallidum:60 T.maritima:60

D3BV90              	100.00%		Q9X1J3              	100.00%
Bootstrap support for D3BV90 as seed ortholog is 100%.
Bootstrap support for Q9X1J3 as seed ortholog is 100%.

Group of orthologs #280. Best score 59 bits
Score difference with first non-orthologous sequence - P.pallidum:59 T.maritima:59

D3BMX5              	100.00%		P38508              	100.00%
Bootstrap support for D3BMX5 as seed ortholog is 100%.
Bootstrap support for P38508 as seed ortholog is 100%.

Group of orthologs #281. Best score 58 bits
Score difference with first non-orthologous sequence - P.pallidum:58 T.maritima:58

D3BHV3              	100.00%		P38513              	100.00%
Bootstrap support for D3BHV3 as seed ortholog is 100%.
Bootstrap support for P38513 as seed ortholog is 100%.

Group of orthologs #282. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:57 T.maritima:57

D3BHJ3              	100.00%		Q9X1G4              	100.00%
Bootstrap support for D3BHJ3 as seed ortholog is 100%.
Bootstrap support for Q9X1G4 as seed ortholog is 100%.

Group of orthologs #283. Best score 56 bits
Score difference with first non-orthologous sequence - P.pallidum:56 T.maritima:56

D3BUV8              	100.00%		Q9X1A0              	100.00%
Bootstrap support for D3BUV8 as seed ortholog is 100%.
Bootstrap support for Q9X1A0 as seed ortholog is 100%.

Group of orthologs #284. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:55 T.maritima:55

D3B2M8              	100.00%		Q9WZK1              	100.00%
D3BLI7              	61.27%		
D3BKP8              	56.45%		
D3B5H0              	52.32%		
D3BBY9              	35.97%		
D3BM76              	21.17%		
Bootstrap support for D3B2M8 as seed ortholog is 100%.
Bootstrap support for Q9WZK1 as seed ortholog is 100%.

Group of orthologs #285. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:55 T.maritima:55

D3B729              	100.00%		Q9S5X5              	100.00%
D3B728              	59.01%		
D3B6Z5              	34.08%		
D3B706              	14.41%		
D3BJX0              	11.41%		
Bootstrap support for D3B729 as seed ortholog is 100%.
Bootstrap support for Q9S5X5 as seed ortholog is 100%.

Group of orthologs #286. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:55 T.maritima:55

D3BEA7              	100.00%		Q9X1G9              	100.00%
Bootstrap support for D3BEA7 as seed ortholog is 100%.
Bootstrap support for Q9X1G9 as seed ortholog is 100%.

Group of orthologs #287. Best score 54 bits
Score difference with first non-orthologous sequence - P.pallidum:54 T.maritima:54

D3B437              	100.00%		P38520              	100.00%
Bootstrap support for D3B437 as seed ortholog is 100%.
Bootstrap support for P38520 as seed ortholog is 100%.

Group of orthologs #288. Best score 54 bits
Score difference with first non-orthologous sequence - P.pallidum:1 T.maritima:54

D3BC46              	100.00%		Q9WYF4              	100.00%
Bootstrap support for D3BC46 as seed ortholog is 48%.
Alternative seed ortholog is D3BJ73 (1 bits away from this cluster)
Bootstrap support for Q9WYF4 as seed ortholog is 100%.

Group of orthologs #289. Best score 53 bits
Score difference with first non-orthologous sequence - P.pallidum:53 T.maritima:53

D3AYQ3              	100.00%		P38526              	100.00%
Bootstrap support for D3AYQ3 as seed ortholog is 100%.
Bootstrap support for P38526 as seed ortholog is 100%.

Group of orthologs #290. Best score 53 bits
Score difference with first non-orthologous sequence - P.pallidum:53 T.maritima:53

D3BAX1              	100.00%		Q9WZH1              	100.00%
Bootstrap support for D3BAX1 as seed ortholog is 100%.
Bootstrap support for Q9WZH1 as seed ortholog is 100%.

Group of orthologs #291. Best score 52 bits
Score difference with first non-orthologous sequence - P.pallidum:52 T.maritima:52

D3BMK7              	100.00%		Q9X0P5              	100.00%
D3B2D5              	52.44%		
Bootstrap support for D3BMK7 as seed ortholog is 100%.
Bootstrap support for Q9X0P5 as seed ortholog is 100%.

Group of orthologs #292. Best score 51 bits
Score difference with first non-orthologous sequence - P.pallidum:51 T.maritima:51

D3B465              	100.00%		Q9X0G5              	100.00%
Bootstrap support for D3B465 as seed ortholog is 100%.
Bootstrap support for Q9X0G5 as seed ortholog is 100%.

Group of orthologs #293. Best score 51 bits
Score difference with first non-orthologous sequence - P.pallidum:51 T.maritima:51

D3BKX3              	100.00%		Q9X192              	100.00%
Bootstrap support for D3BKX3 as seed ortholog is 100%.
Bootstrap support for Q9X192 as seed ortholog is 100%.

Group of orthologs #294. Best score 49 bits
Score difference with first non-orthologous sequence - P.pallidum:49 T.maritima:49

D3BQC7              	100.00%		P16115              	100.00%
D3B7L8              	40.28%		
D3BR71              	36.55%		
Bootstrap support for D3BQC7 as seed ortholog is 100%.
Bootstrap support for P16115 as seed ortholog is 100%.

Group of orthologs #295. Best score 49 bits
Score difference with first non-orthologous sequence - P.pallidum:49 T.maritima:49

D3BEF3              	100.00%		Q9X191              	100.00%
                    	       		Q9X218              	9.29%
Bootstrap support for D3BEF3 as seed ortholog is 100%.
Bootstrap support for Q9X191 as seed ortholog is 100%.

Group of orthologs #296. Best score 49 bits
Score difference with first non-orthologous sequence - P.pallidum:49 T.maritima:49

D3B4V6              	100.00%		P38511              	100.00%
Bootstrap support for D3B4V6 as seed ortholog is 100%.
Bootstrap support for P38511 as seed ortholog is 100%.

Group of orthologs #297. Best score 48 bits
Score difference with first non-orthologous sequence - P.pallidum:48 T.maritima:48

D3B5R5              	100.00%		P38519              	100.00%
Bootstrap support for D3B5R5 as seed ortholog is 100%.
Bootstrap support for P38519 as seed ortholog is 100%.

Group of orthologs #298. Best score 48 bits
Score difference with first non-orthologous sequence - P.pallidum:48 T.maritima:48

D3BS38              	100.00%		Q9WZA8              	100.00%
Bootstrap support for D3BS38 as seed ortholog is 100%.
Bootstrap support for Q9WZA8 as seed ortholog is 100%.

Group of orthologs #299. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 T.maritima:47

D3B438              	100.00%		Q9X0Q9              	100.00%
                    	       		Q9X0Y1              	9.52%
Bootstrap support for D3B438 as seed ortholog is 100%.
Bootstrap support for Q9X0Q9 as seed ortholog is 100%.

Group of orthologs #300. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 T.maritima:47

D3AVK7              	100.00%		Q9WZD0              	100.00%
Bootstrap support for D3AVK7 as seed ortholog is 100%.
Bootstrap support for Q9WZD0 as seed ortholog is 100%.

Group of orthologs #301. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 T.maritima:47

D3B0F4              	100.00%		Q9X194              	100.00%
Bootstrap support for D3B0F4 as seed ortholog is 100%.
Bootstrap support for Q9X194 as seed ortholog is 100%.

Group of orthologs #302. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 T.maritima:47

D3B9Y5              	100.00%		P38518              	100.00%
Bootstrap support for D3B9Y5 as seed ortholog is 100%.
Bootstrap support for P38518 as seed ortholog is 100%.

Group of orthologs #303. Best score 45 bits
Score difference with first non-orthologous sequence - P.pallidum:2 T.maritima:45

D3BQ52              	100.00%		Q9WZT6              	100.00%
D3B230              	14.95%		
Bootstrap support for D3BQ52 as seed ortholog is 45%.
Alternative seed ortholog is D3BJ92 (2 bits away from this cluster)
Bootstrap support for Q9WZT6 as seed ortholog is 100%.

Group of orthologs #304. Best score 45 bits
Score difference with first non-orthologous sequence - P.pallidum:3 T.maritima:45

D3AYM5              	100.00%		Q9WYB9              	100.00%
Bootstrap support for D3AYM5 as seed ortholog is 54%.
Alternative seed ortholog is D3B2A6 (3 bits away from this cluster)
Bootstrap support for Q9WYB9 as seed ortholog is 100%.

Group of orthologs #305. Best score 44 bits
Score difference with first non-orthologous sequence - P.pallidum:44 T.maritima:44

D3B2R4              	100.00%		Q9X1N7              	100.00%
Bootstrap support for D3B2R4 as seed ortholog is 100%.
Bootstrap support for Q9X1N7 as seed ortholog is 100%.

Group of orthologs #306. Best score 42 bits
Score difference with first non-orthologous sequence - P.pallidum:42 T.maritima:42

D3B246              	100.00%		Q9WY18              	100.00%
Bootstrap support for D3B246 as seed ortholog is 100%.
Bootstrap support for Q9WY18 as seed ortholog is 100%.

Group of orthologs #307. Best score 42 bits
Score difference with first non-orthologous sequence - P.pallidum:42 T.maritima:42

D3B8X3              	100.00%		Q9WYG8              	100.00%
Bootstrap support for D3B8X3 as seed ortholog is 100%.
Bootstrap support for Q9WYG8 as seed ortholog is 100%.

Group of orthologs #308. Best score 40 bits
Score difference with first non-orthologous sequence - P.pallidum:40 T.maritima:40

D3B790              	100.00%		Q9WZ90              	100.00%
                    	       		Q9WZ95              	7.81%
Bootstrap support for D3B790 as seed ortholog is 100%.
Bootstrap support for Q9WZ90 as seed ortholog is 100%.