###################################
1081 groups of orthologs
1267 in-paralogs from P.pallidum
1118 in-paralogs from P.yoelii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 3317 bits
Score difference with first non-orthologous sequence - P.pallidum:3317 P.yoelii:2238

D3BP40              	100.00%		Q7RPJ1              	100.00%
Bootstrap support for D3BP40 as seed ortholog is 100%.
Bootstrap support for Q7RPJ1 as seed ortholog is 100%.

Group of orthologs #2. Best score 3058 bits
Score difference with first non-orthologous sequence - P.pallidum:3058 P.yoelii:3058

D3BFM8              	100.00%		Q7RNZ3              	100.00%
Bootstrap support for D3BFM8 as seed ortholog is 100%.
Bootstrap support for Q7RNZ3 as seed ortholog is 100%.

Group of orthologs #3. Best score 1571 bits
Score difference with first non-orthologous sequence - P.pallidum:1571 P.yoelii:1571

D3BJK4              	100.00%		Q7RJS0              	100.00%
Bootstrap support for D3BJK4 as seed ortholog is 100%.
Bootstrap support for Q7RJS0 as seed ortholog is 100%.

Group of orthologs #4. Best score 1207 bits
Score difference with first non-orthologous sequence - P.pallidum:1207 P.yoelii:1207

D3B936              	100.00%		Q7RNH0              	100.00%
Bootstrap support for D3B936 as seed ortholog is 100%.
Bootstrap support for Q7RNH0 as seed ortholog is 100%.

Group of orthologs #5. Best score 1069 bits
Score difference with first non-orthologous sequence - P.pallidum:1069 P.yoelii:1069

D3BI99              	100.00%		Q7RNW8              	100.00%
Bootstrap support for D3BI99 as seed ortholog is 100%.
Bootstrap support for Q7RNW8 as seed ortholog is 100%.

Group of orthologs #6. Best score 1057 bits
Score difference with first non-orthologous sequence - P.pallidum:561 P.yoelii:726

D3BIX9              	100.00%		Q7RII4              	100.00%
Bootstrap support for D3BIX9 as seed ortholog is 100%.
Bootstrap support for Q7RII4 as seed ortholog is 100%.

Group of orthologs #7. Best score 1053 bits
Score difference with first non-orthologous sequence - P.pallidum:215 P.yoelii:757

D3BU68              	100.00%		Q7RDR5              	100.00%
Bootstrap support for D3BU68 as seed ortholog is 99%.
Bootstrap support for Q7RDR5 as seed ortholog is 100%.

Group of orthologs #8. Best score 1042 bits
Score difference with first non-orthologous sequence - P.pallidum:1042 P.yoelii:1042

D3BIF3              	100.00%		Q7RIZ3              	100.00%
Bootstrap support for D3BIF3 as seed ortholog is 100%.
Bootstrap support for Q7RIZ3 as seed ortholog is 100%.

Group of orthologs #9. Best score 1034 bits
Score difference with first non-orthologous sequence - P.pallidum:1034 P.yoelii:1034

D3BBT9              	100.00%		Q7RM47              	100.00%
Bootstrap support for D3BBT9 as seed ortholog is 100%.
Bootstrap support for Q7RM47 as seed ortholog is 100%.

Group of orthologs #10. Best score 1028 bits
Score difference with first non-orthologous sequence - P.pallidum:130 P.yoelii:1028

D3B7U7              	100.00%		Q7RJ69              	100.00%
Bootstrap support for D3B7U7 as seed ortholog is 98%.
Bootstrap support for Q7RJ69 as seed ortholog is 100%.

Group of orthologs #11. Best score 1018 bits
Score difference with first non-orthologous sequence - P.pallidum:722 P.yoelii:919

D3BUX1              	100.00%		Q7RNG8              	100.00%
Bootstrap support for D3BUX1 as seed ortholog is 100%.
Bootstrap support for Q7RNG8 as seed ortholog is 100%.

Group of orthologs #12. Best score 964 bits
Score difference with first non-orthologous sequence - P.pallidum:766 P.yoelii:964

D3BM47              	100.00%		Q7RSN6              	100.00%
Bootstrap support for D3BM47 as seed ortholog is 100%.
Bootstrap support for Q7RSN6 as seed ortholog is 100%.

Group of orthologs #13. Best score 946 bits
Score difference with first non-orthologous sequence - P.pallidum:946 P.yoelii:453

D3AVZ6              	100.00%		Q7RSE7              	100.00%
D3BVM0              	13.00%		
Bootstrap support for D3AVZ6 as seed ortholog is 100%.
Bootstrap support for Q7RSE7 as seed ortholog is 100%.

Group of orthologs #14. Best score 942 bits
Score difference with first non-orthologous sequence - P.pallidum:942 P.yoelii:942

D3B545              	100.00%		Q7RBI5              	100.00%
D3AVQ2              	45.85%		
Bootstrap support for D3B545 as seed ortholog is 100%.
Bootstrap support for Q7RBI5 as seed ortholog is 100%.

Group of orthologs #15. Best score 938 bits
Score difference with first non-orthologous sequence - P.pallidum:938 P.yoelii:938

D3BHD6              	100.00%		Q7RQI2              	100.00%
Bootstrap support for D3BHD6 as seed ortholog is 100%.
Bootstrap support for Q7RQI2 as seed ortholog is 100%.

Group of orthologs #16. Best score 926 bits
Score difference with first non-orthologous sequence - P.pallidum:926 P.yoelii:926

D3BKC8              	100.00%		Q7RQQ6              	100.00%
Bootstrap support for D3BKC8 as seed ortholog is 100%.
Bootstrap support for Q7RQQ6 as seed ortholog is 100%.

Group of orthologs #17. Best score 909 bits
Score difference with first non-orthologous sequence - P.pallidum:909 P.yoelii:909

D3B0N0              	100.00%		Q7RRT3              	100.00%
Bootstrap support for D3B0N0 as seed ortholog is 100%.
Bootstrap support for Q7RRT3 as seed ortholog is 100%.

Group of orthologs #18. Best score 864 bits
Score difference with first non-orthologous sequence - P.pallidum:864 P.yoelii:864

D3BMV7              	100.00%		Q7RDR8              	100.00%
Bootstrap support for D3BMV7 as seed ortholog is 100%.
Bootstrap support for Q7RDR8 as seed ortholog is 100%.

Group of orthologs #19. Best score 854 bits
Score difference with first non-orthologous sequence - P.pallidum:223 P.yoelii:337

D3BB51              	100.00%		Q7RR97              	100.00%
Bootstrap support for D3BB51 as seed ortholog is 99%.
Bootstrap support for Q7RR97 as seed ortholog is 100%.

Group of orthologs #20. Best score 836 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:836

D3BPX3              	100.00%		Q7RS51              	100.00%
Bootstrap support for D3BPX3 as seed ortholog is 95%.
Bootstrap support for Q7RS51 as seed ortholog is 100%.

Group of orthologs #21. Best score 811 bits
Score difference with first non-orthologous sequence - P.pallidum:811 P.yoelii:811

D3BNB1              	100.00%		Q7RNG3              	100.00%
Bootstrap support for D3BNB1 as seed ortholog is 100%.
Bootstrap support for Q7RNG3 as seed ortholog is 100%.

Group of orthologs #22. Best score 810 bits
Score difference with first non-orthologous sequence - P.pallidum:179 P.yoelii:646

D3BEE3              	100.00%		Q7RBQ9              	100.00%
Bootstrap support for D3BEE3 as seed ortholog is 99%.
Bootstrap support for Q7RBQ9 as seed ortholog is 100%.

Group of orthologs #23. Best score 804 bits
Score difference with first non-orthologous sequence - P.pallidum:464 P.yoelii:600

D3BFQ2              	100.00%		Q7RDK5              	100.00%
Bootstrap support for D3BFQ2 as seed ortholog is 100%.
Bootstrap support for Q7RDK5 as seed ortholog is 100%.

Group of orthologs #24. Best score 798 bits
Score difference with first non-orthologous sequence - P.pallidum:543 P.yoelii:798

D3BE43              	100.00%		Q7RER2              	100.00%
Bootstrap support for D3BE43 as seed ortholog is 100%.
Bootstrap support for Q7RER2 as seed ortholog is 100%.

Group of orthologs #25. Best score 780 bits
Score difference with first non-orthologous sequence - P.pallidum:79 P.yoelii:169

D3BG38              	100.00%		Q7RS02              	100.00%
Bootstrap support for D3BG38 as seed ortholog is 95%.
Bootstrap support for Q7RS02 as seed ortholog is 99%.

Group of orthologs #26. Best score 770 bits
Score difference with first non-orthologous sequence - P.pallidum:609 P.yoelii:527

D3B244              	100.00%		Q7RQ16              	100.00%
Bootstrap support for D3B244 as seed ortholog is 100%.
Bootstrap support for Q7RQ16 as seed ortholog is 100%.

Group of orthologs #27. Best score 769 bits
Score difference with first non-orthologous sequence - P.pallidum:179 P.yoelii:769

D3B6X4              	100.00%		Q7RLW7              	100.00%
Bootstrap support for D3B6X4 as seed ortholog is 99%.
Bootstrap support for Q7RLW7 as seed ortholog is 100%.

Group of orthologs #28. Best score 762 bits
Score difference with first non-orthologous sequence - P.pallidum:549 P.yoelii:762

D3AY31              	100.00%		Q7R983              	100.00%
Bootstrap support for D3AY31 as seed ortholog is 100%.
Bootstrap support for Q7R983 as seed ortholog is 100%.

Group of orthologs #29. Best score 759 bits
Score difference with first non-orthologous sequence - P.pallidum:658 P.yoelii:759

D3AZB7              	100.00%		Q7RGX7              	100.00%
Bootstrap support for D3AZB7 as seed ortholog is 100%.
Bootstrap support for Q7RGX7 as seed ortholog is 100%.

Group of orthologs #30. Best score 738 bits
Score difference with first non-orthologous sequence - P.pallidum:738 P.yoelii:641

D3B700              	100.00%		Q7RPA3              	100.00%
Bootstrap support for D3B700 as seed ortholog is 100%.
Bootstrap support for Q7RPA3 as seed ortholog is 100%.

Group of orthologs #31. Best score 731 bits
Score difference with first non-orthologous sequence - P.pallidum:515 P.yoelii:731

D3BN72              	100.00%		Q7RIV2              	100.00%
Bootstrap support for D3BN72 as seed ortholog is 100%.
Bootstrap support for Q7RIV2 as seed ortholog is 100%.

Group of orthologs #32. Best score 711 bits
Score difference with first non-orthologous sequence - P.pallidum:711 P.yoelii:610

D3B5K2              	100.00%		Q7REG3              	100.00%
Bootstrap support for D3B5K2 as seed ortholog is 100%.
Bootstrap support for Q7REG3 as seed ortholog is 100%.

Group of orthologs #33. Best score 699 bits
Score difference with first non-orthologous sequence - P.pallidum:699 P.yoelii:699

D3BS87              	100.00%		Q7RJK4              	100.00%
Bootstrap support for D3BS87 as seed ortholog is 100%.
Bootstrap support for Q7RJK4 as seed ortholog is 100%.

Group of orthologs #34. Best score 696 bits
Score difference with first non-orthologous sequence - P.pallidum:696 P.yoelii:452

D3AWD2              	100.00%		P12543              	100.00%
D3BGV6              	56.81%		Q7RHC6              	76.27%
Bootstrap support for D3AWD2 as seed ortholog is 100%.
Bootstrap support for P12543 as seed ortholog is 100%.

Group of orthologs #35. Best score 696 bits
Score difference with first non-orthologous sequence - P.pallidum:696 P.yoelii:414

D3BQW2              	100.00%		Q7RCR6              	100.00%
Bootstrap support for D3BQW2 as seed ortholog is 100%.
Bootstrap support for Q7RCR6 as seed ortholog is 100%.

Group of orthologs #36. Best score 693 bits
Score difference with first non-orthologous sequence - P.pallidum:415 P.yoelii:693

D3BQ59              	100.00%		Q7RNN6              	100.00%
Bootstrap support for D3BQ59 as seed ortholog is 100%.
Bootstrap support for Q7RNN6 as seed ortholog is 100%.

Group of orthologs #37. Best score 682 bits
Score difference with first non-orthologous sequence - P.pallidum:325 P.yoelii:682

D3B6W7              	100.00%		Q7RL40              	100.00%
Bootstrap support for D3B6W7 as seed ortholog is 100%.
Bootstrap support for Q7RL40 as seed ortholog is 100%.

Group of orthologs #38. Best score 676 bits
Score difference with first non-orthologous sequence - P.pallidum:676 P.yoelii:676

D3BEZ7              	100.00%		Q7RI54              	100.00%
Bootstrap support for D3BEZ7 as seed ortholog is 100%.
Bootstrap support for Q7RI54 as seed ortholog is 100%.

Group of orthologs #39. Best score 671 bits
Score difference with first non-orthologous sequence - P.pallidum:333 P.yoelii:671

D3B7Q7              	100.00%		Q7RK23              	100.00%
Bootstrap support for D3B7Q7 as seed ortholog is 100%.
Bootstrap support for Q7RK23 as seed ortholog is 100%.

Group of orthologs #40. Best score 659 bits
Score difference with first non-orthologous sequence - P.pallidum:659 P.yoelii:659

D3B1K5              	100.00%		Q7RLN0              	100.00%
Bootstrap support for D3B1K5 as seed ortholog is 100%.
Bootstrap support for Q7RLN0 as seed ortholog is 100%.

Group of orthologs #41. Best score 658 bits
Score difference with first non-orthologous sequence - P.pallidum:160 P.yoelii:658

D3BMT5              	100.00%		Q7R9A7              	100.00%
Bootstrap support for D3BMT5 as seed ortholog is 99%.
Bootstrap support for Q7R9A7 as seed ortholog is 100%.

Group of orthologs #42. Best score 657 bits
Score difference with first non-orthologous sequence - P.pallidum:136 P.yoelii:60

D3BD07              	100.00%		Q7RME1              	100.00%
D3B2M1              	98.04%		
D3BSX0              	88.24%		
D3BM82              	86.27%		
D3B1V2              	42.16%		
Bootstrap support for D3BD07 as seed ortholog is 100%.
Bootstrap support for Q7RME1 as seed ortholog is 99%.

Group of orthologs #43. Best score 654 bits
Score difference with first non-orthologous sequence - P.pallidum:188 P.yoelii:654

D3BMZ2              	100.00%		Q7RM86              	100.00%
Bootstrap support for D3BMZ2 as seed ortholog is 99%.
Bootstrap support for Q7RM86 as seed ortholog is 100%.

Group of orthologs #44. Best score 651 bits
Score difference with first non-orthologous sequence - P.pallidum:651 P.yoelii:651

D3BD99              	100.00%		Q7RBZ8              	100.00%
Bootstrap support for D3BD99 as seed ortholog is 100%.
Bootstrap support for Q7RBZ8 as seed ortholog is 100%.

Group of orthologs #45. Best score 649 bits
Score difference with first non-orthologous sequence - P.pallidum:311 P.yoelii:524

D3B1P3              	100.00%		Q7RM12              	100.00%
Bootstrap support for D3B1P3 as seed ortholog is 100%.
Bootstrap support for Q7RM12 as seed ortholog is 100%.

Group of orthologs #46. Best score 643 bits
Score difference with first non-orthologous sequence - P.pallidum:586 P.yoelii:643

D3BIJ3              	100.00%		Q7RQ70              	100.00%
Bootstrap support for D3BIJ3 as seed ortholog is 100%.
Bootstrap support for Q7RQ70 as seed ortholog is 100%.

Group of orthologs #47. Best score 639 bits
Score difference with first non-orthologous sequence - P.pallidum:531 P.yoelii:639

D3B3V5              	100.00%		Q7RQP8              	100.00%
Bootstrap support for D3B3V5 as seed ortholog is 100%.
Bootstrap support for Q7RQP8 as seed ortholog is 100%.

Group of orthologs #48. Best score 638 bits
Score difference with first non-orthologous sequence - P.pallidum:225 P.yoelii:560

D3B255              	100.00%		Q7RHF9              	100.00%
Bootstrap support for D3B255 as seed ortholog is 100%.
Bootstrap support for Q7RHF9 as seed ortholog is 100%.

Group of orthologs #49. Best score 638 bits
Score difference with first non-orthologous sequence - P.pallidum:638 P.yoelii:638

D3B434              	100.00%		Q7RQX6              	100.00%
Bootstrap support for D3B434 as seed ortholog is 100%.
Bootstrap support for Q7RQX6 as seed ortholog is 100%.

Group of orthologs #50. Best score 622 bits
Score difference with first non-orthologous sequence - P.pallidum:500 P.yoelii:622

D3BIZ6              	100.00%		Q7RKU5              	100.00%
Bootstrap support for D3BIZ6 as seed ortholog is 100%.
Bootstrap support for Q7RKU5 as seed ortholog is 100%.

Group of orthologs #51. Best score 621 bits
Score difference with first non-orthologous sequence - P.pallidum:539 P.yoelii:621

D3BFQ1              	100.00%		Q7RCE7              	100.00%
Bootstrap support for D3BFQ1 as seed ortholog is 100%.
Bootstrap support for Q7RCE7 as seed ortholog is 100%.

Group of orthologs #52. Best score 620 bits
Score difference with first non-orthologous sequence - P.pallidum:539 P.yoelii:303

D3B3I9              	100.00%		Q7RFT8              	100.00%
Bootstrap support for D3B3I9 as seed ortholog is 100%.
Bootstrap support for Q7RFT8 as seed ortholog is 100%.

Group of orthologs #53. Best score 617 bits
Score difference with first non-orthologous sequence - P.pallidum:485 P.yoelii:617

D3B6W8              	100.00%		Q7RRF3              	100.00%
Bootstrap support for D3B6W8 as seed ortholog is 100%.
Bootstrap support for Q7RRF3 as seed ortholog is 100%.

Group of orthologs #54. Best score 609 bits
Score difference with first non-orthologous sequence - P.pallidum:369 P.yoelii:441

D3BFC6              	100.00%		Q7RRW9              	100.00%
Bootstrap support for D3BFC6 as seed ortholog is 100%.
Bootstrap support for Q7RRW9 as seed ortholog is 100%.

Group of orthologs #55. Best score 609 bits
Score difference with first non-orthologous sequence - P.pallidum:129 P.yoelii:609

D3BPX4              	100.00%		Q7RNE0              	100.00%
Bootstrap support for D3BPX4 as seed ortholog is 95%.
Bootstrap support for Q7RNE0 as seed ortholog is 100%.

Group of orthologs #56. Best score 607 bits
Score difference with first non-orthologous sequence - P.pallidum:607 P.yoelii:303

D3BB83              	100.00%		Q7RDS8              	100.00%
Bootstrap support for D3BB83 as seed ortholog is 100%.
Bootstrap support for Q7RDS8 as seed ortholog is 100%.

Group of orthologs #57. Best score 603 bits
Score difference with first non-orthologous sequence - P.pallidum:299 P.yoelii:62

D3B594              	100.00%		Q7RIW3              	100.00%
Bootstrap support for D3B594 as seed ortholog is 100%.
Bootstrap support for Q7RIW3 as seed ortholog is 75%.

Group of orthologs #58. Best score 600 bits
Score difference with first non-orthologous sequence - P.pallidum:263 P.yoelii:430

D3BMN4              	100.00%		Q7RFK0              	100.00%
Bootstrap support for D3BMN4 as seed ortholog is 100%.
Bootstrap support for Q7RFK0 as seed ortholog is 100%.

Group of orthologs #59. Best score 597 bits
Score difference with first non-orthologous sequence - P.pallidum:597 P.yoelii:58

D3BEQ3              	100.00%		Q7RT64              	100.00%
Bootstrap support for D3BEQ3 as seed ortholog is 100%.
Bootstrap support for Q7RT64 as seed ortholog is 85%.

Group of orthologs #60. Best score 596 bits
Score difference with first non-orthologous sequence - P.pallidum:468 P.yoelii:596

D3BEG0              	100.00%		Q7RPL1              	100.00%
Bootstrap support for D3BEG0 as seed ortholog is 100%.
Bootstrap support for Q7RPL1 as seed ortholog is 100%.

Group of orthologs #61. Best score 589 bits
Score difference with first non-orthologous sequence - P.pallidum:354 P.yoelii:589

D3BPJ6              	100.00%		Q7RN88              	100.00%
Bootstrap support for D3BPJ6 as seed ortholog is 100%.
Bootstrap support for Q7RN88 as seed ortholog is 100%.

Group of orthologs #62. Best score 581 bits
Score difference with first non-orthologous sequence - P.pallidum:581 P.yoelii:101

D3AX78              	100.00%		Q7RNG4              	100.00%
D3B1D8              	7.73%		
D3BF29              	7.30%		
Bootstrap support for D3AX78 as seed ortholog is 100%.
Bootstrap support for Q7RNG4 as seed ortholog is 99%.

Group of orthologs #63. Best score 581 bits
Score difference with first non-orthologous sequence - P.pallidum:339 P.yoelii:419

D3B3N8              	100.00%		Q7RKG4              	100.00%
Bootstrap support for D3B3N8 as seed ortholog is 100%.
Bootstrap support for Q7RKG4 as seed ortholog is 100%.

Group of orthologs #64. Best score 577 bits
Score difference with first non-orthologous sequence - P.pallidum:577 P.yoelii:60

D3BVP5              	100.00%		Q7RQX1              	100.00%
D3B8D6              	7.35%		
Bootstrap support for D3BVP5 as seed ortholog is 100%.
Bootstrap support for Q7RQX1 as seed ortholog is 63%.
Alternative seed ortholog is Q7RG88 (60 bits away from this cluster)

Group of orthologs #65. Best score 577 bits
Score difference with first non-orthologous sequence - P.pallidum:447 P.yoelii:577

D3BGX5              	100.00%		Q7RKK4              	100.00%
Bootstrap support for D3BGX5 as seed ortholog is 100%.
Bootstrap support for Q7RKK4 as seed ortholog is 100%.

Group of orthologs #66. Best score 575 bits
Score difference with first non-orthologous sequence - P.pallidum:352 P.yoelii:575

D3B5E4              	100.00%		Q7R9M5              	100.00%
Bootstrap support for D3B5E4 as seed ortholog is 100%.
Bootstrap support for Q7R9M5 as seed ortholog is 100%.

Group of orthologs #67. Best score 571 bits
Score difference with first non-orthologous sequence - P.pallidum:571 P.yoelii:571

D3AYV1              	100.00%		Q7RIQ9              	100.00%
Bootstrap support for D3AYV1 as seed ortholog is 100%.
Bootstrap support for Q7RIQ9 as seed ortholog is 100%.

Group of orthologs #68. Best score 571 bits
Score difference with first non-orthologous sequence - P.pallidum:571 P.yoelii:571

D3BKQ8              	100.00%		Q7RRI1              	100.00%
Bootstrap support for D3BKQ8 as seed ortholog is 100%.
Bootstrap support for Q7RRI1 as seed ortholog is 100%.

Group of orthologs #69. Best score 570 bits
Score difference with first non-orthologous sequence - P.pallidum:570 P.yoelii:570

D3BQY0              	100.00%		Q7RSV5              	100.00%
Bootstrap support for D3BQY0 as seed ortholog is 100%.
Bootstrap support for Q7RSV5 as seed ortholog is 100%.

Group of orthologs #70. Best score 569 bits
Score difference with first non-orthologous sequence - P.pallidum:569 P.yoelii:289

D3BMR9              	100.00%		Q7RP17              	100.00%
Bootstrap support for D3BMR9 as seed ortholog is 100%.
Bootstrap support for Q7RP17 as seed ortholog is 99%.

Group of orthologs #71. Best score 568 bits
Score difference with first non-orthologous sequence - P.pallidum:444 P.yoelii:568

D3BPU8              	100.00%		Q7RRR1              	100.00%
Bootstrap support for D3BPU8 as seed ortholog is 100%.
Bootstrap support for Q7RRR1 as seed ortholog is 100%.

Group of orthologs #72. Best score 568 bits
Score difference with first non-orthologous sequence - P.pallidum:568 P.yoelii:568

D3BT14              	100.00%		Q7RT93              	100.00%
Bootstrap support for D3BT14 as seed ortholog is 100%.
Bootstrap support for Q7RT93 as seed ortholog is 100%.

Group of orthologs #73. Best score 567 bits
Score difference with first non-orthologous sequence - P.pallidum:567 P.yoelii:281

D3BP87              	100.00%		Q7RA60              	100.00%
D3BH75              	30.61%		
Bootstrap support for D3BP87 as seed ortholog is 100%.
Bootstrap support for Q7RA60 as seed ortholog is 100%.

Group of orthologs #74. Best score 567 bits
Score difference with first non-orthologous sequence - P.pallidum:567 P.yoelii:567

D3BUQ9              	100.00%		Q7RPC6              	100.00%
Bootstrap support for D3BUQ9 as seed ortholog is 100%.
Bootstrap support for Q7RPC6 as seed ortholog is 100%.

Group of orthologs #75. Best score 566 bits
Score difference with first non-orthologous sequence - P.pallidum:566 P.yoelii:566

D3BSJ1              	100.00%		Q7RHB5              	100.00%
Bootstrap support for D3BSJ1 as seed ortholog is 100%.
Bootstrap support for Q7RHB5 as seed ortholog is 100%.

Group of orthologs #76. Best score 565 bits
Score difference with first non-orthologous sequence - P.pallidum:381 P.yoelii:228

D3BCV5              	100.00%		Q7RIJ2              	100.00%
Bootstrap support for D3BCV5 as seed ortholog is 100%.
Bootstrap support for Q7RIJ2 as seed ortholog is 100%.

Group of orthologs #77. Best score 561 bits
Score difference with first non-orthologous sequence - P.pallidum:561 P.yoelii:561

D3BEC9              	100.00%		Q7RRX5              	100.00%
                    	       		Q7RLN5              	19.49%
Bootstrap support for D3BEC9 as seed ortholog is 100%.
Bootstrap support for Q7RRX5 as seed ortholog is 100%.

Group of orthologs #78. Best score 554 bits
Score difference with first non-orthologous sequence - P.pallidum:554 P.yoelii:554

D3B8W8              	100.00%		Q7RHL4              	100.00%
D3AYG7              	41.04%		
D3BFQ9              	12.05%		
Bootstrap support for D3B8W8 as seed ortholog is 100%.
Bootstrap support for Q7RHL4 as seed ortholog is 100%.

Group of orthologs #79. Best score 552 bits
Score difference with first non-orthologous sequence - P.pallidum:364 P.yoelii:392

D3B0K9              	100.00%		Q7R886              	100.00%
Bootstrap support for D3B0K9 as seed ortholog is 100%.
Bootstrap support for Q7R886 as seed ortholog is 100%.

Group of orthologs #80. Best score 552 bits
Score difference with first non-orthologous sequence - P.pallidum:552 P.yoelii:552

D3B015              	100.00%		Q7RMJ9              	100.00%
Bootstrap support for D3B015 as seed ortholog is 100%.
Bootstrap support for Q7RMJ9 as seed ortholog is 100%.

Group of orthologs #81. Best score 551 bits
Score difference with first non-orthologous sequence - P.pallidum:120 P.yoelii:155

D3BE82              	100.00%		Q7RAV3              	100.00%
Bootstrap support for D3BE82 as seed ortholog is 99%.
Bootstrap support for Q7RAV3 as seed ortholog is 100%.

Group of orthologs #82. Best score 546 bits
Score difference with first non-orthologous sequence - P.pallidum:312 P.yoelii:386

D3BA83              	100.00%		Q7RQ19              	100.00%
Bootstrap support for D3BA83 as seed ortholog is 100%.
Bootstrap support for Q7RQ19 as seed ortholog is 100%.

Group of orthologs #83. Best score 543 bits
Score difference with first non-orthologous sequence - P.pallidum:543 P.yoelii:543

D3BRI9              	100.00%		Q7RN08              	100.00%
Bootstrap support for D3BRI9 as seed ortholog is 100%.
Bootstrap support for Q7RN08 as seed ortholog is 100%.

Group of orthologs #84. Best score 537 bits
Score difference with first non-orthologous sequence - P.pallidum:390 P.yoelii:537

D3BDZ2              	100.00%		Q7RCZ8              	100.00%
Bootstrap support for D3BDZ2 as seed ortholog is 100%.
Bootstrap support for Q7RCZ8 as seed ortholog is 100%.

Group of orthologs #85. Best score 536 bits
Score difference with first non-orthologous sequence - P.pallidum:536 P.yoelii:536

D3BM68              	100.00%		Q7RMM7              	100.00%
Bootstrap support for D3BM68 as seed ortholog is 100%.
Bootstrap support for Q7RMM7 as seed ortholog is 100%.

Group of orthologs #86. Best score 535 bits
Score difference with first non-orthologous sequence - P.pallidum:535 P.yoelii:535

D3B2N2              	100.00%		Q7RSV7              	100.00%
D3BQN9              	68.15%		
D3BQP1              	45.93%		
D3B9D6              	32.46%		
Bootstrap support for D3B2N2 as seed ortholog is 100%.
Bootstrap support for Q7RSV7 as seed ortholog is 100%.

Group of orthologs #87. Best score 535 bits
Score difference with first non-orthologous sequence - P.pallidum:199 P.yoelii:406

D3BP51              	100.00%		Q7PDD0              	100.00%
Bootstrap support for D3BP51 as seed ortholog is 100%.
Bootstrap support for Q7PDD0 as seed ortholog is 100%.

Group of orthologs #88. Best score 532 bits
Score difference with first non-orthologous sequence - P.pallidum:532 P.yoelii:532

D3BRS6              	100.00%		Q7RQP9              	100.00%
Bootstrap support for D3BRS6 as seed ortholog is 100%.
Bootstrap support for Q7RQP9 as seed ortholog is 100%.

Group of orthologs #89. Best score 531 bits
Score difference with first non-orthologous sequence - P.pallidum:531 P.yoelii:531

D3B3X9              	100.00%		Q7RIC1              	100.00%
Bootstrap support for D3B3X9 as seed ortholog is 100%.
Bootstrap support for Q7RIC1 as seed ortholog is 100%.

Group of orthologs #90. Best score 531 bits
Score difference with first non-orthologous sequence - P.pallidum:249 P.yoelii:325

D3BEH4              	100.00%		Q7RHD8              	100.00%
Bootstrap support for D3BEH4 as seed ortholog is 100%.
Bootstrap support for Q7RHD8 as seed ortholog is 100%.

Group of orthologs #91. Best score 530 bits
Score difference with first non-orthologous sequence - P.pallidum:221 P.yoelii:154

D3BDW2              	100.00%		Q7RCE6              	100.00%
D3B4Y9              	10.21%		
Bootstrap support for D3BDW2 as seed ortholog is 100%.
Bootstrap support for Q7RCE6 as seed ortholog is 99%.

Group of orthologs #92. Best score 530 bits
Score difference with first non-orthologous sequence - P.pallidum:530 P.yoelii:530

D3B3X6              	100.00%		Q7RKJ5              	100.00%
Bootstrap support for D3B3X6 as seed ortholog is 100%.
Bootstrap support for Q7RKJ5 as seed ortholog is 100%.

Group of orthologs #93. Best score 530 bits
Score difference with first non-orthologous sequence - P.pallidum:530 P.yoelii:530

D3B7L4              	100.00%		Q7RQA3              	100.00%
Bootstrap support for D3B7L4 as seed ortholog is 100%.
Bootstrap support for Q7RQA3 as seed ortholog is 100%.

Group of orthologs #94. Best score 528 bits
Score difference with first non-orthologous sequence - P.pallidum:231 P.yoelii:350

D3AY78              	100.00%		Q7PDU2              	100.00%
Bootstrap support for D3AY78 as seed ortholog is 99%.
Bootstrap support for Q7PDU2 as seed ortholog is 100%.

Group of orthologs #95. Best score 528 bits
Score difference with first non-orthologous sequence - P.pallidum:528 P.yoelii:528

D3B9F6              	100.00%		Q7RSZ5              	100.00%
Bootstrap support for D3B9F6 as seed ortholog is 100%.
Bootstrap support for Q7RSZ5 as seed ortholog is 100%.

Group of orthologs #96. Best score 526 bits
Score difference with first non-orthologous sequence - P.pallidum:276 P.yoelii:169

D3B2A8              	100.00%		Q7RAL7              	100.00%
Bootstrap support for D3B2A8 as seed ortholog is 99%.
Bootstrap support for Q7RAL7 as seed ortholog is 99%.

Group of orthologs #97. Best score 524 bits
Score difference with first non-orthologous sequence - P.pallidum:274 P.yoelii:293

D3BBD1              	100.00%		Q7RE30              	100.00%
Bootstrap support for D3BBD1 as seed ortholog is 100%.
Bootstrap support for Q7RE30 as seed ortholog is 100%.

Group of orthologs #98. Best score 522 bits
Score difference with first non-orthologous sequence - P.pallidum:259 P.yoelii:285

D3BBY9              	100.00%		Q7R8R4              	100.00%
Bootstrap support for D3BBY9 as seed ortholog is 100%.
Bootstrap support for Q7R8R4 as seed ortholog is 100%.

Group of orthologs #99. Best score 522 bits
Score difference with first non-orthologous sequence - P.pallidum:522 P.yoelii:522

D3B5U3              	100.00%		Q7RS22              	100.00%
Bootstrap support for D3B5U3 as seed ortholog is 100%.
Bootstrap support for Q7RS22 as seed ortholog is 100%.

Group of orthologs #100. Best score 521 bits
Score difference with first non-orthologous sequence - P.pallidum:521 P.yoelii:521

D3B474              	100.00%		Q7RLP3              	100.00%
Bootstrap support for D3B474 as seed ortholog is 100%.
Bootstrap support for Q7RLP3 as seed ortholog is 100%.

Group of orthologs #101. Best score 514 bits
Score difference with first non-orthologous sequence - P.pallidum:514 P.yoelii:514

D3B350              	100.00%		Q7RG00              	100.00%
Bootstrap support for D3B350 as seed ortholog is 100%.
Bootstrap support for Q7RG00 as seed ortholog is 100%.

Group of orthologs #102. Best score 508 bits
Score difference with first non-orthologous sequence - P.pallidum:384 P.yoelii:449

D3BP61              	100.00%		Q7RJX4              	100.00%
Bootstrap support for D3BP61 as seed ortholog is 100%.
Bootstrap support for Q7RJX4 as seed ortholog is 100%.

Group of orthologs #103. Best score 505 bits
Score difference with first non-orthologous sequence - P.pallidum:372 P.yoelii:505

D3BHQ7              	100.00%		Q7PDR8              	100.00%
Bootstrap support for D3BHQ7 as seed ortholog is 100%.
Bootstrap support for Q7PDR8 as seed ortholog is 100%.

Group of orthologs #104. Best score 503 bits
Score difference with first non-orthologous sequence - P.pallidum:174 P.yoelii:300

D3B3K7              	100.00%		Q7RKU6              	100.00%
Bootstrap support for D3B3K7 as seed ortholog is 99%.
Bootstrap support for Q7RKU6 as seed ortholog is 100%.

Group of orthologs #105. Best score 502 bits
Score difference with first non-orthologous sequence - P.pallidum:502 P.yoelii:502

D3B5W3              	100.00%		Q7RRU3              	100.00%
Bootstrap support for D3B5W3 as seed ortholog is 100%.
Bootstrap support for Q7RRU3 as seed ortholog is 100%.

Group of orthologs #106. Best score 500 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:442

D3AZ87              	100.00%		Q7RNM1              	100.00%
Bootstrap support for D3AZ87 as seed ortholog is 99%.
Bootstrap support for Q7RNM1 as seed ortholog is 100%.

Group of orthologs #107. Best score 498 bits
Score difference with first non-orthologous sequence - P.pallidum:394 P.yoelii:443

D3B6H8              	100.00%		Q7RF83              	100.00%
Bootstrap support for D3B6H8 as seed ortholog is 100%.
Bootstrap support for Q7RF83 as seed ortholog is 100%.

Group of orthologs #108. Best score 497 bits
Score difference with first non-orthologous sequence - P.pallidum:34 P.yoelii:281

D3BRU6              	100.00%		Q7RT79              	100.00%
Bootstrap support for D3BRU6 as seed ortholog is 78%.
Bootstrap support for Q7RT79 as seed ortholog is 100%.

Group of orthologs #109. Best score 495 bits
Score difference with first non-orthologous sequence - P.pallidum:495 P.yoelii:495

D3BGD9              	100.00%		Q7RG04              	100.00%
Bootstrap support for D3BGD9 as seed ortholog is 100%.
Bootstrap support for Q7RG04 as seed ortholog is 100%.

Group of orthologs #110. Best score 493 bits
Score difference with first non-orthologous sequence - P.pallidum:138 P.yoelii:493

D3BQM3              	100.00%		Q7RFT4              	100.00%
Bootstrap support for D3BQM3 as seed ortholog is 99%.
Bootstrap support for Q7RFT4 as seed ortholog is 100%.

Group of orthologs #111. Best score 491 bits
Score difference with first non-orthologous sequence - P.pallidum:278 P.yoelii:72

D3BMB3              	100.00%		Q7RGI7              	100.00%
Bootstrap support for D3BMB3 as seed ortholog is 100%.
Bootstrap support for Q7RGI7 as seed ortholog is 98%.

Group of orthologs #112. Best score 490 bits
Score difference with first non-orthologous sequence - P.pallidum:490 P.yoelii:49

D3BI12              	100.00%		Q7RJ92              	100.00%
Bootstrap support for D3BI12 as seed ortholog is 100%.
Bootstrap support for Q7RJ92 as seed ortholog is 90%.

Group of orthologs #113. Best score 490 bits
Score difference with first non-orthologous sequence - P.pallidum:490 P.yoelii:490

D3BVL5              	100.00%		Q7RPD9              	100.00%
Bootstrap support for D3BVL5 as seed ortholog is 100%.
Bootstrap support for Q7RPD9 as seed ortholog is 100%.

Group of orthologs #114. Best score 489 bits
Score difference with first non-orthologous sequence - P.pallidum:489 P.yoelii:489

D3B9H8              	100.00%		Q7RKL0              	100.00%
Bootstrap support for D3B9H8 as seed ortholog is 100%.
Bootstrap support for Q7RKL0 as seed ortholog is 100%.

Group of orthologs #115. Best score 488 bits
Score difference with first non-orthologous sequence - P.pallidum:139 P.yoelii:488

D3B883              	100.00%		Q7RQC0              	100.00%
Bootstrap support for D3B883 as seed ortholog is 99%.
Bootstrap support for Q7RQC0 as seed ortholog is 100%.

Group of orthologs #116. Best score 488 bits
Score difference with first non-orthologous sequence - P.pallidum:488 P.yoelii:217

D3BRF2              	100.00%		Q7RJ52              	100.00%
Bootstrap support for D3BRF2 as seed ortholog is 100%.
Bootstrap support for Q7RJ52 as seed ortholog is 99%.

Group of orthologs #117. Best score 480 bits
Score difference with first non-orthologous sequence - P.pallidum:480 P.yoelii:480

D3AZM1              	100.00%		Q7RHV6              	100.00%
Bootstrap support for D3AZM1 as seed ortholog is 100%.
Bootstrap support for Q7RHV6 as seed ortholog is 100%.

Group of orthologs #118. Best score 480 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:480

D3BBF7              	100.00%		Q7RKG5              	100.00%
Bootstrap support for D3BBF7 as seed ortholog is 97%.
Bootstrap support for Q7RKG5 as seed ortholog is 100%.

Group of orthologs #119. Best score 479 bits
Score difference with first non-orthologous sequence - P.pallidum:479 P.yoelii:479

D3BK20              	100.00%		Q7RCA3              	100.00%
Bootstrap support for D3BK20 as seed ortholog is 100%.
Bootstrap support for Q7RCA3 as seed ortholog is 100%.

Group of orthologs #120. Best score 477 bits
Score difference with first non-orthologous sequence - P.pallidum:477 P.yoelii:477

D3AWW1              	100.00%		Q7RDP2              	100.00%
Bootstrap support for D3AWW1 as seed ortholog is 100%.
Bootstrap support for Q7RDP2 as seed ortholog is 100%.

Group of orthologs #121. Best score 473 bits
Score difference with first non-orthologous sequence - P.pallidum:473 P.yoelii:473

D3B427              	100.00%		Q7RBA1              	100.00%
Bootstrap support for D3B427 as seed ortholog is 100%.
Bootstrap support for Q7RBA1 as seed ortholog is 100%.

Group of orthologs #122. Best score 472 bits
Score difference with first non-orthologous sequence - P.pallidum:472 P.yoelii:259

D3BG45              	100.00%		Q7RQQ4              	100.00%
Bootstrap support for D3BG45 as seed ortholog is 100%.
Bootstrap support for Q7RQQ4 as seed ortholog is 100%.

Group of orthologs #123. Best score 472 bits
Score difference with first non-orthologous sequence - P.pallidum:472 P.yoelii:472

D3BQJ8              	100.00%		Q7RIL8              	100.00%
Bootstrap support for D3BQJ8 as seed ortholog is 100%.
Bootstrap support for Q7RIL8 as seed ortholog is 100%.

Group of orthologs #124. Best score 465 bits
Score difference with first non-orthologous sequence - P.pallidum:465 P.yoelii:465

D3B3Y9              	100.00%		Q7RFM5              	100.00%
Bootstrap support for D3B3Y9 as seed ortholog is 100%.
Bootstrap support for Q7RFM5 as seed ortholog is 100%.

Group of orthologs #125. Best score 463 bits
Score difference with first non-orthologous sequence - P.pallidum:254 P.yoelii:248

D3B6E1              	100.00%		Q7RRA2              	100.00%
Bootstrap support for D3B6E1 as seed ortholog is 100%.
Bootstrap support for Q7RRA2 as seed ortholog is 100%.

Group of orthologs #126. Best score 462 bits
Score difference with first non-orthologous sequence - P.pallidum:462 P.yoelii:462

D3BAK8              	100.00%		Q7RH02              	100.00%
Bootstrap support for D3BAK8 as seed ortholog is 100%.
Bootstrap support for Q7RH02 as seed ortholog is 100%.

Group of orthologs #127. Best score 459 bits
Score difference with first non-orthologous sequence - P.pallidum:321 P.yoelii:335

D3BK16              	100.00%		Q7RMC3              	100.00%
Bootstrap support for D3BK16 as seed ortholog is 100%.
Bootstrap support for Q7RMC3 as seed ortholog is 100%.

Group of orthologs #128. Best score 458 bits
Score difference with first non-orthologous sequence - P.pallidum:208 P.yoelii:181

D3BV25              	100.00%		Q7RF23              	100.00%
Bootstrap support for D3BV25 as seed ortholog is 99%.
Bootstrap support for Q7RF23 as seed ortholog is 99%.

Group of orthologs #129. Best score 456 bits
Score difference with first non-orthologous sequence - P.pallidum:456 P.yoelii:456

D3BRX9              	100.00%		Q7RQG4              	100.00%
Bootstrap support for D3BRX9 as seed ortholog is 100%.
Bootstrap support for Q7RQG4 as seed ortholog is 100%.

Group of orthologs #130. Best score 450 bits
Score difference with first non-orthologous sequence - P.pallidum:450 P.yoelii:450

D3BQM7              	100.00%		Q7RE42              	100.00%
Bootstrap support for D3BQM7 as seed ortholog is 100%.
Bootstrap support for Q7RE42 as seed ortholog is 100%.

Group of orthologs #131. Best score 447 bits
Score difference with first non-orthologous sequence - P.pallidum:326 P.yoelii:447

D3BBY5              	100.00%		Q7RKM1              	100.00%
Bootstrap support for D3BBY5 as seed ortholog is 100%.
Bootstrap support for Q7RKM1 as seed ortholog is 100%.

Group of orthologs #132. Best score 446 bits
Score difference with first non-orthologous sequence - P.pallidum:298 P.yoelii:341

D3B471              	100.00%		Q7REL6              	100.00%
Bootstrap support for D3B471 as seed ortholog is 100%.
Bootstrap support for Q7REL6 as seed ortholog is 100%.

Group of orthologs #133. Best score 446 bits
Score difference with first non-orthologous sequence - P.pallidum:446 P.yoelii:446

D3BAK5              	100.00%		Q7RQ88              	100.00%
Bootstrap support for D3BAK5 as seed ortholog is 100%.
Bootstrap support for Q7RQ88 as seed ortholog is 100%.

Group of orthologs #134. Best score 445 bits
Score difference with first non-orthologous sequence - P.pallidum:184 P.yoelii:229

D3BM62              	100.00%		Q7RMK4              	100.00%
Bootstrap support for D3BM62 as seed ortholog is 100%.
Bootstrap support for Q7RMK4 as seed ortholog is 100%.

Group of orthologs #135. Best score 445 bits
Score difference with first non-orthologous sequence - P.pallidum:230 P.yoelii:215

D3BNB9              	100.00%		Q7RSM9              	100.00%
Bootstrap support for D3BNB9 as seed ortholog is 100%.
Bootstrap support for Q7RSM9 as seed ortholog is 100%.

Group of orthologs #136. Best score 441 bits
Score difference with first non-orthologous sequence - P.pallidum:305 P.yoelii:89

D3B7P5              	100.00%		Q7RBK9              	100.00%
Bootstrap support for D3B7P5 as seed ortholog is 100%.
Bootstrap support for Q7RBK9 as seed ortholog is 98%.

Group of orthologs #137. Best score 440 bits
Score difference with first non-orthologous sequence - P.pallidum:440 P.yoelii:440

D3B127              	100.00%		Q7RER1              	100.00%
Bootstrap support for D3B127 as seed ortholog is 100%.
Bootstrap support for Q7RER1 as seed ortholog is 100%.

Group of orthologs #138. Best score 439 bits
Score difference with first non-orthologous sequence - P.pallidum:439 P.yoelii:439

D3B5A9              	100.00%		Q7RFX8              	100.00%
Bootstrap support for D3B5A9 as seed ortholog is 100%.
Bootstrap support for Q7RFX8 as seed ortholog is 100%.

Group of orthologs #139. Best score 437 bits
Score difference with first non-orthologous sequence - P.pallidum:233 P.yoelii:244

D3AXU9              	100.00%		Q7RM70              	100.00%
Bootstrap support for D3AXU9 as seed ortholog is 100%.
Bootstrap support for Q7RM70 as seed ortholog is 99%.

Group of orthologs #140. Best score 436 bits
Score difference with first non-orthologous sequence - P.pallidum:436 P.yoelii:362

D3AZW1              	100.00%		Q7RCN2              	100.00%
Bootstrap support for D3AZW1 as seed ortholog is 100%.
Bootstrap support for Q7RCN2 as seed ortholog is 100%.

Group of orthologs #141. Best score 433 bits
Score difference with first non-orthologous sequence - P.pallidum:433 P.yoelii:151

D3BB39              	100.00%		Q7RFN7              	100.00%
Bootstrap support for D3BB39 as seed ortholog is 100%.
Bootstrap support for Q7RFN7 as seed ortholog is 99%.

Group of orthologs #142. Best score 432 bits
Score difference with first non-orthologous sequence - P.pallidum:432 P.yoelii:432

D3BNY4              	100.00%		Q7RKK8              	100.00%
Bootstrap support for D3BNY4 as seed ortholog is 100%.
Bootstrap support for Q7RKK8 as seed ortholog is 100%.

Group of orthologs #143. Best score 431 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:233

D3B2V3              	100.00%		Q7RRC1              	100.00%
Bootstrap support for D3B2V3 as seed ortholog is 99%.
Bootstrap support for Q7RRC1 as seed ortholog is 100%.

Group of orthologs #144. Best score 426 bits
Score difference with first non-orthologous sequence - P.pallidum:426 P.yoelii:168

D3B0M9              	100.00%		Q7RI91              	100.00%
Bootstrap support for D3B0M9 as seed ortholog is 100%.
Bootstrap support for Q7RI91 as seed ortholog is 99%.

Group of orthologs #145. Best score 426 bits
Score difference with first non-orthologous sequence - P.pallidum:426 P.yoelii:426

D3B344              	100.00%		Q7RMK2              	100.00%
Bootstrap support for D3B344 as seed ortholog is 100%.
Bootstrap support for Q7RMK2 as seed ortholog is 100%.

Group of orthologs #146. Best score 425 bits
Score difference with first non-orthologous sequence - P.pallidum:425 P.yoelii:425

D3AY94              	100.00%		Q7RHT4              	100.00%
Bootstrap support for D3AY94 as seed ortholog is 100%.
Bootstrap support for Q7RHT4 as seed ortholog is 100%.

Group of orthologs #147. Best score 425 bits
Score difference with first non-orthologous sequence - P.pallidum:425 P.yoelii:425

D3BB47              	100.00%		Q7RLI2              	100.00%
Bootstrap support for D3BB47 as seed ortholog is 100%.
Bootstrap support for Q7RLI2 as seed ortholog is 100%.

Group of orthologs #148. Best score 424 bits
Score difference with first non-orthologous sequence - P.pallidum:365 P.yoelii:350

D3BDA3              	100.00%		Q7RBX5              	100.00%
Bootstrap support for D3BDA3 as seed ortholog is 100%.
Bootstrap support for Q7RBX5 as seed ortholog is 100%.

Group of orthologs #149. Best score 423 bits
Score difference with first non-orthologous sequence - P.pallidum:378 P.yoelii:423

D3B6H9              	100.00%		Q7PDS5              	100.00%
D3B3G3              	14.12%		
Bootstrap support for D3B6H9 as seed ortholog is 100%.
Bootstrap support for Q7PDS5 as seed ortholog is 100%.

Group of orthologs #150. Best score 423 bits
Score difference with first non-orthologous sequence - P.pallidum:423 P.yoelii:261

D3BUD7              	100.00%		Q7RIF3              	100.00%
D3BKB8              	30.47%		
Bootstrap support for D3BUD7 as seed ortholog is 100%.
Bootstrap support for Q7RIF3 as seed ortholog is 100%.

Group of orthologs #151. Best score 423 bits
Score difference with first non-orthologous sequence - P.pallidum:423 P.yoelii:423

D3BF55              	100.00%		Q7RIT8              	100.00%
Bootstrap support for D3BF55 as seed ortholog is 100%.
Bootstrap support for Q7RIT8 as seed ortholog is 100%.

Group of orthologs #152. Best score 422 bits
Score difference with first non-orthologous sequence - P.pallidum:422 P.yoelii:349

D3B2S5              	100.00%		Q7RQX7              	100.00%
D3BUR5              	47.64%		
Bootstrap support for D3B2S5 as seed ortholog is 100%.
Bootstrap support for Q7RQX7 as seed ortholog is 100%.

Group of orthologs #153. Best score 422 bits
Score difference with first non-orthologous sequence - P.pallidum:422 P.yoelii:100

D3BLY9              	100.00%		Q7RE51              	100.00%
Bootstrap support for D3BLY9 as seed ortholog is 100%.
Bootstrap support for Q7RE51 as seed ortholog is 93%.

Group of orthologs #154. Best score 421 bits
Score difference with first non-orthologous sequence - P.pallidum:421 P.yoelii:421

D3AZX3              	100.00%		Q7RN71              	100.00%
Bootstrap support for D3AZX3 as seed ortholog is 100%.
Bootstrap support for Q7RN71 as seed ortholog is 100%.

Group of orthologs #155. Best score 421 bits
Score difference with first non-orthologous sequence - P.pallidum:421 P.yoelii:340

D3BBR7              	100.00%		Q7RRK1              	100.00%
Bootstrap support for D3BBR7 as seed ortholog is 100%.
Bootstrap support for Q7RRK1 as seed ortholog is 100%.

Group of orthologs #156. Best score 420 bits
Score difference with first non-orthologous sequence - P.pallidum:420 P.yoelii:420

D3BBV3              	100.00%		Q7RB08              	100.00%
Bootstrap support for D3BBV3 as seed ortholog is 100%.
Bootstrap support for Q7RB08 as seed ortholog is 100%.

Group of orthologs #157. Best score 419 bits
Score difference with first non-orthologous sequence - P.pallidum:212 P.yoelii:419

D3AYZ6              	100.00%		Q7RQK0              	100.00%
                    	       		Q7R8N0              	9.89%
Bootstrap support for D3AYZ6 as seed ortholog is 99%.
Bootstrap support for Q7RQK0 as seed ortholog is 100%.

Group of orthologs #158. Best score 419 bits
Score difference with first non-orthologous sequence - P.pallidum:88 P.yoelii:208

D3BMU7              	100.00%		Q7RM49              	100.00%
Bootstrap support for D3BMU7 as seed ortholog is 99%.
Bootstrap support for Q7RM49 as seed ortholog is 100%.

Group of orthologs #159. Best score 418 bits
Score difference with first non-orthologous sequence - P.pallidum:418 P.yoelii:418

D3BV45              	100.00%		Q7RJI0              	100.00%
Bootstrap support for D3BV45 as seed ortholog is 100%.
Bootstrap support for Q7RJI0 as seed ortholog is 100%.

Group of orthologs #160. Best score 417 bits
Score difference with first non-orthologous sequence - P.pallidum:196 P.yoelii:417

D3AY64              	100.00%		Q7RMB5              	100.00%
Bootstrap support for D3AY64 as seed ortholog is 100%.
Bootstrap support for Q7RMB5 as seed ortholog is 100%.

Group of orthologs #161. Best score 417 bits
Score difference with first non-orthologous sequence - P.pallidum:91 P.yoelii:99

D3B2M8              	100.00%		Q7RM99              	100.00%
Bootstrap support for D3B2M8 as seed ortholog is 99%.
Bootstrap support for Q7RM99 as seed ortholog is 99%.

Group of orthologs #162. Best score 415 bits
Score difference with first non-orthologous sequence - P.pallidum:415 P.yoelii:218

D3B0M1              	100.00%		Q7RFQ9              	100.00%
Bootstrap support for D3B0M1 as seed ortholog is 100%.
Bootstrap support for Q7RFQ9 as seed ortholog is 100%.

Group of orthologs #163. Best score 415 bits
Score difference with first non-orthologous sequence - P.pallidum:112 P.yoelii:230

D3BSG3              	100.00%		Q7RMF7              	100.00%
Bootstrap support for D3BSG3 as seed ortholog is 99%.
Bootstrap support for Q7RMF7 as seed ortholog is 99%.

Group of orthologs #164. Best score 413 bits
Score difference with first non-orthologous sequence - P.pallidum:30 P.yoelii:19

D3BAR8              	100.00%		Q7RGE5              	100.00%
Bootstrap support for D3BAR8 as seed ortholog is 73%.
Alternative seed ortholog is D3BAN7 (30 bits away from this cluster)
Bootstrap support for Q7RGE5 as seed ortholog is 66%.
Alternative seed ortholog is Q7REJ4 (19 bits away from this cluster)

Group of orthologs #165. Best score 411 bits
Score difference with first non-orthologous sequence - P.pallidum:213 P.yoelii:411

D3B161              	100.00%		Q7RT90              	100.00%
Bootstrap support for D3B161 as seed ortholog is 100%.
Bootstrap support for Q7RT90 as seed ortholog is 100%.

Group of orthologs #166. Best score 409 bits
Score difference with first non-orthologous sequence - P.pallidum:409 P.yoelii:409

D3B8W3              	100.00%		Q7RDW7              	100.00%
Bootstrap support for D3B8W3 as seed ortholog is 100%.
Bootstrap support for Q7RDW7 as seed ortholog is 100%.

Group of orthologs #167. Best score 406 bits
Score difference with first non-orthologous sequence - P.pallidum:406 P.yoelii:406

D3B6S4              	100.00%		Q7RR76              	100.00%
Bootstrap support for D3B6S4 as seed ortholog is 100%.
Bootstrap support for Q7RR76 as seed ortholog is 100%.

Group of orthologs #168. Best score 405 bits
Score difference with first non-orthologous sequence - P.pallidum:217 P.yoelii:153

D3BK58              	100.00%		Q7RQ56              	100.00%
Bootstrap support for D3BK58 as seed ortholog is 100%.
Bootstrap support for Q7RQ56 as seed ortholog is 99%.

Group of orthologs #169. Best score 404 bits
Score difference with first non-orthologous sequence - P.pallidum:404 P.yoelii:404

D3BFI2              	100.00%		Q7RIY8              	100.00%
Bootstrap support for D3BFI2 as seed ortholog is 100%.
Bootstrap support for Q7RIY8 as seed ortholog is 100%.

Group of orthologs #170. Best score 404 bits
Score difference with first non-orthologous sequence - P.pallidum:404 P.yoelii:404

D3BR60              	100.00%		Q7RRG4              	100.00%
Bootstrap support for D3BR60 as seed ortholog is 100%.
Bootstrap support for Q7RRG4 as seed ortholog is 100%.

Group of orthologs #171. Best score 403 bits
Score difference with first non-orthologous sequence - P.pallidum:338 P.yoelii:403

D3B1F9              	100.00%		Q7RLU2              	100.00%
Bootstrap support for D3B1F9 as seed ortholog is 100%.
Bootstrap support for Q7RLU2 as seed ortholog is 100%.

Group of orthologs #172. Best score 403 bits
Score difference with first non-orthologous sequence - P.pallidum:190 P.yoelii:260

D3BDE5              	100.00%		Q7RJK1              	100.00%
Bootstrap support for D3BDE5 as seed ortholog is 100%.
Bootstrap support for Q7RJK1 as seed ortholog is 100%.

Group of orthologs #173. Best score 402 bits
Score difference with first non-orthologous sequence - P.pallidum:402 P.yoelii:402

D3B0H1              	100.00%		Q7RAE1              	100.00%
Bootstrap support for D3B0H1 as seed ortholog is 100%.
Bootstrap support for Q7RAE1 as seed ortholog is 100%.

Group of orthologs #174. Best score 402 bits
Score difference with first non-orthologous sequence - P.pallidum:402 P.yoelii:402

D3BKL2              	100.00%		Q7RIB6              	100.00%
Bootstrap support for D3BKL2 as seed ortholog is 100%.
Bootstrap support for Q7RIB6 as seed ortholog is 100%.

Group of orthologs #175. Best score 402 bits
Score difference with first non-orthologous sequence - P.pallidum:402 P.yoelii:402

D3BUD8              	100.00%		Q7RJZ4              	100.00%
Bootstrap support for D3BUD8 as seed ortholog is 100%.
Bootstrap support for Q7RJZ4 as seed ortholog is 100%.

Group of orthologs #176. Best score 400 bits
Score difference with first non-orthologous sequence - P.pallidum:233 P.yoelii:400

D3BQP4              	100.00%		Q7RBT7              	100.00%
D3AVH5              	10.98%		
Bootstrap support for D3BQP4 as seed ortholog is 99%.
Bootstrap support for Q7RBT7 as seed ortholog is 100%.

Group of orthologs #177. Best score 398 bits
Score difference with first non-orthologous sequence - P.pallidum:398 P.yoelii:398

D3AVV8              	100.00%		Q7RH87              	100.00%
Bootstrap support for D3AVV8 as seed ortholog is 100%.
Bootstrap support for Q7RH87 as seed ortholog is 100%.

Group of orthologs #178. Best score 395 bits
Score difference with first non-orthologous sequence - P.pallidum:395 P.yoelii:395

D3BMV1              	100.00%		Q7RIS1              	100.00%
Bootstrap support for D3BMV1 as seed ortholog is 100%.
Bootstrap support for Q7RIS1 as seed ortholog is 100%.

Group of orthologs #179. Best score 394 bits
Score difference with first non-orthologous sequence - P.pallidum:394 P.yoelii:394

D3BQ08              	100.00%		Q7RPB1              	100.00%
Bootstrap support for D3BQ08 as seed ortholog is 100%.
Bootstrap support for Q7RPB1 as seed ortholog is 100%.

Group of orthologs #180. Best score 394 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:394

D3BT28              	100.00%		Q7RR02              	100.00%
Bootstrap support for D3BT28 as seed ortholog is 99%.
Bootstrap support for Q7RR02 as seed ortholog is 100%.

Group of orthologs #181. Best score 393 bits
Score difference with first non-orthologous sequence - P.pallidum:393 P.yoelii:393

D3AY91              	100.00%		Q7RCR7              	100.00%
                    	       		Q7RP94              	70.83%
Bootstrap support for D3AY91 as seed ortholog is 100%.
Bootstrap support for Q7RCR7 as seed ortholog is 100%.

Group of orthologs #182. Best score 393 bits
Score difference with first non-orthologous sequence - P.pallidum:393 P.yoelii:164

D3BBC2              	100.00%		Q7RQK2              	100.00%
Bootstrap support for D3BBC2 as seed ortholog is 100%.
Bootstrap support for Q7RQK2 as seed ortholog is 99%.

Group of orthologs #183. Best score 391 bits
Score difference with first non-orthologous sequence - P.pallidum:308 P.yoelii:103

D3BI15              	100.00%		Q7RI44              	100.00%
Bootstrap support for D3BI15 as seed ortholog is 100%.
Bootstrap support for Q7RI44 as seed ortholog is 99%.

Group of orthologs #184. Best score 391 bits
Score difference with first non-orthologous sequence - P.pallidum:391 P.yoelii:391

D3BPD1              	100.00%		Q7RHJ1              	100.00%
Bootstrap support for D3BPD1 as seed ortholog is 100%.
Bootstrap support for Q7RHJ1 as seed ortholog is 100%.

Group of orthologs #185. Best score 388 bits
Score difference with first non-orthologous sequence - P.pallidum:41 P.yoelii:93

D3BLI7              	100.00%		Q7RSB3              	100.00%
D3BKP8              	6.70%		
Bootstrap support for D3BLI7 as seed ortholog is 91%.
Bootstrap support for Q7RSB3 as seed ortholog is 99%.

Group of orthologs #186. Best score 387 bits
Score difference with first non-orthologous sequence - P.pallidum:387 P.yoelii:387

D3BTQ4              	100.00%		Q7RJF9              	100.00%
Bootstrap support for D3BTQ4 as seed ortholog is 100%.
Bootstrap support for Q7RJF9 as seed ortholog is 100%.

Group of orthologs #187. Best score 386 bits
Score difference with first non-orthologous sequence - P.pallidum:386 P.yoelii:386

D3BA71              	100.00%		Q7RQ71              	100.00%
D3BK04              	24.15%		Q7RSL0              	5.40%
D3BGI5              	20.24%		
D3BKB9              	18.25%		
D3BPD4              	16.67%		
D3B008              	12.64%		
D3BST1              	10.32%		
Bootstrap support for D3BA71 as seed ortholog is 100%.
Bootstrap support for Q7RQ71 as seed ortholog is 100%.

Group of orthologs #188. Best score 385 bits
Score difference with first non-orthologous sequence - P.pallidum:256 P.yoelii:385

D3B2K0              	100.00%		Q7RHQ2              	100.00%
Bootstrap support for D3B2K0 as seed ortholog is 100%.
Bootstrap support for Q7RHQ2 as seed ortholog is 100%.

Group of orthologs #189. Best score 383 bits
Score difference with first non-orthologous sequence - P.pallidum:383 P.yoelii:383

D3B481              	100.00%		Q7RBD6              	100.00%
Bootstrap support for D3B481 as seed ortholog is 100%.
Bootstrap support for Q7RBD6 as seed ortholog is 100%.

Group of orthologs #190. Best score 382 bits
Score difference with first non-orthologous sequence - P.pallidum:288 P.yoelii:298

D3AVR8              	100.00%		Q7R838              	100.00%
Bootstrap support for D3AVR8 as seed ortholog is 100%.
Bootstrap support for Q7R838 as seed ortholog is 100%.

Group of orthologs #191. Best score 381 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:102

D3AZ71              	100.00%		Q7RQ64              	100.00%
Bootstrap support for D3AZ71 as seed ortholog is 99%.
Bootstrap support for Q7RQ64 as seed ortholog is 96%.

Group of orthologs #192. Best score 375 bits
Score difference with first non-orthologous sequence - P.pallidum:375 P.yoelii:375

D3B072              	100.00%		Q7RB96              	100.00%
Bootstrap support for D3B072 as seed ortholog is 100%.
Bootstrap support for Q7RB96 as seed ortholog is 100%.

Group of orthologs #193. Best score 375 bits
Score difference with first non-orthologous sequence - P.pallidum:375 P.yoelii:124

D3BD10              	100.00%		Q7RQ98              	100.00%
Bootstrap support for D3BD10 as seed ortholog is 100%.
Bootstrap support for Q7RQ98 as seed ortholog is 99%.

Group of orthologs #194. Best score 374 bits
Score difference with first non-orthologous sequence - P.pallidum:374 P.yoelii:374

D3BEX2              	100.00%		Q7RJG5              	100.00%
Bootstrap support for D3BEX2 as seed ortholog is 100%.
Bootstrap support for Q7RJG5 as seed ortholog is 100%.

Group of orthologs #195. Best score 369 bits
Score difference with first non-orthologous sequence - P.pallidum:235 P.yoelii:369

D3BE62              	100.00%		Q7RCK3              	100.00%
Bootstrap support for D3BE62 as seed ortholog is 100%.
Bootstrap support for Q7RCK3 as seed ortholog is 100%.

Group of orthologs #196. Best score 365 bits
Score difference with first non-orthologous sequence - P.pallidum:159 P.yoelii:226

D3AVP3              	100.00%		Q7RBT4              	100.00%
Bootstrap support for D3AVP3 as seed ortholog is 99%.
Bootstrap support for Q7RBT4 as seed ortholog is 100%.

Group of orthologs #197. Best score 365 bits
Score difference with first non-orthologous sequence - P.pallidum:365 P.yoelii:365

D3AY16              	100.00%		Q7RP55              	100.00%
Bootstrap support for D3AY16 as seed ortholog is 100%.
Bootstrap support for Q7RP55 as seed ortholog is 100%.

Group of orthologs #198. Best score 364 bits
Score difference with first non-orthologous sequence - P.pallidum:364 P.yoelii:364

D3BF15              	100.00%		Q7RJW2              	100.00%
Bootstrap support for D3BF15 as seed ortholog is 100%.
Bootstrap support for Q7RJW2 as seed ortholog is 100%.

Group of orthologs #199. Best score 364 bits
Score difference with first non-orthologous sequence - P.pallidum:364 P.yoelii:364

D3BEC2              	100.00%		Q7RRQ3              	100.00%
Bootstrap support for D3BEC2 as seed ortholog is 100%.
Bootstrap support for Q7RRQ3 as seed ortholog is 100%.

Group of orthologs #200. Best score 364 bits
Score difference with first non-orthologous sequence - P.pallidum:364 P.yoelii:364

D3BUL3              	100.00%		Q7RC16              	100.00%
Bootstrap support for D3BUL3 as seed ortholog is 100%.
Bootstrap support for Q7RC16 as seed ortholog is 100%.

Group of orthologs #201. Best score 363 bits
Score difference with first non-orthologous sequence - P.pallidum:363 P.yoelii:363

D3B684              	100.00%		Q7RQH5              	100.00%
Bootstrap support for D3B684 as seed ortholog is 100%.
Bootstrap support for Q7RQH5 as seed ortholog is 100%.

Group of orthologs #202. Best score 362 bits
Score difference with first non-orthologous sequence - P.pallidum:217 P.yoelii:53

D3AYA4              	100.00%		Q7RCY7              	100.00%
                    	       		Q7RLN6              	95.09%
Bootstrap support for D3AYA4 as seed ortholog is 99%.
Bootstrap support for Q7RCY7 as seed ortholog is 89%.

Group of orthologs #203. Best score 361 bits
Score difference with first non-orthologous sequence - P.pallidum:361 P.yoelii:361

D3BUC4              	100.00%		Q7RDK2              	100.00%
D3BUD3              	51.97%		
Bootstrap support for D3BUC4 as seed ortholog is 100%.
Bootstrap support for Q7RDK2 as seed ortholog is 100%.

Group of orthologs #204. Best score 361 bits
Score difference with first non-orthologous sequence - P.pallidum:180 P.yoelii:209

D3B695              	100.00%		Q7RKH5              	100.00%
Bootstrap support for D3B695 as seed ortholog is 99%.
Bootstrap support for Q7RKH5 as seed ortholog is 99%.

Group of orthologs #205. Best score 361 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:246

D3BEH3              	100.00%		Q7RPE8              	100.00%
Bootstrap support for D3BEH3 as seed ortholog is 97%.
Bootstrap support for Q7RPE8 as seed ortholog is 100%.

Group of orthologs #206. Best score 360 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:160

D3BB29              	100.00%		Q7RHE2              	100.00%
Bootstrap support for D3BB29 as seed ortholog is 99%.
Bootstrap support for Q7RHE2 as seed ortholog is 99%.

Group of orthologs #207. Best score 358 bits
Score difference with first non-orthologous sequence - P.pallidum:291 P.yoelii:358

D3AYY7              	100.00%		Q7RNL1              	100.00%
Bootstrap support for D3AYY7 as seed ortholog is 100%.
Bootstrap support for Q7RNL1 as seed ortholog is 100%.

Group of orthologs #208. Best score 358 bits
Score difference with first non-orthologous sequence - P.pallidum:358 P.yoelii:358

D3BB07              	100.00%		Q7RRD8              	100.00%
Bootstrap support for D3BB07 as seed ortholog is 100%.
Bootstrap support for Q7RRD8 as seed ortholog is 100%.

Group of orthologs #209. Best score 357 bits
Score difference with first non-orthologous sequence - P.pallidum:357 P.yoelii:357

D3B7I3              	100.00%		Q7RR79              	100.00%
Bootstrap support for D3B7I3 as seed ortholog is 100%.
Bootstrap support for Q7RR79 as seed ortholog is 100%.

Group of orthologs #210. Best score 356 bits
Score difference with first non-orthologous sequence - P.pallidum:3 P.yoelii:356

D3BBA2              	100.00%		Q7RCK5              	100.00%
D3BNB3              	29.75%		
D3AW28              	6.74%		
Bootstrap support for D3BBA2 as seed ortholog is 49%.
Alternative seed ortholog is D3BG47 (3 bits away from this cluster)
Bootstrap support for Q7RCK5 as seed ortholog is 100%.

Group of orthologs #211. Best score 356 bits
Score difference with first non-orthologous sequence - P.pallidum:1 P.yoelii:127

D3BQ63              	100.00%		Q7RKF2              	100.00%
Bootstrap support for D3BQ63 as seed ortholog is 56%.
Alternative seed ortholog is D3BEA1 (1 bits away from this cluster)
Bootstrap support for Q7RKF2 as seed ortholog is 99%.

Group of orthologs #212. Best score 353 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:353

D3AVQ3              	100.00%		Q7RDM4              	100.00%
Bootstrap support for D3AVQ3 as seed ortholog is 99%.
Bootstrap support for Q7RDM4 as seed ortholog is 100%.

Group of orthologs #213. Best score 353 bits
Score difference with first non-orthologous sequence - P.pallidum:353 P.yoelii:353

D3BG72              	100.00%		Q7RAN6              	100.00%
Bootstrap support for D3BG72 as seed ortholog is 100%.
Bootstrap support for Q7RAN6 as seed ortholog is 100%.

Group of orthologs #214. Best score 348 bits
Score difference with first non-orthologous sequence - P.pallidum:202 P.yoelii:286

D3B2T1              	100.00%		Q7RHV1              	100.00%
Bootstrap support for D3B2T1 as seed ortholog is 100%.
Bootstrap support for Q7RHV1 as seed ortholog is 100%.

Group of orthologs #215. Best score 347 bits
Score difference with first non-orthologous sequence - P.pallidum:347 P.yoelii:13

D3B0J2              	100.00%		Q7RHB6              	100.00%
Bootstrap support for D3B0J2 as seed ortholog is 100%.
Bootstrap support for Q7RHB6 as seed ortholog is 59%.
Alternative seed ortholog is Q7RRK5 (13 bits away from this cluster)

Group of orthologs #216. Best score 346 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:139

D3AZS9              	100.00%		Q7RFT5              	100.00%
Bootstrap support for D3AZS9 as seed ortholog is 99%.
Bootstrap support for Q7RFT5 as seed ortholog is 99%.

Group of orthologs #217. Best score 344 bits
Score difference with first non-orthologous sequence - P.pallidum:344 P.yoelii:344

D3AXR9              	100.00%		Q7RPB3              	100.00%
Bootstrap support for D3AXR9 as seed ortholog is 100%.
Bootstrap support for Q7RPB3 as seed ortholog is 100%.

Group of orthologs #218. Best score 344 bits
Score difference with first non-orthologous sequence - P.pallidum:202 P.yoelii:182

D3AZ75              	100.00%		Q7RRP6              	100.00%
Bootstrap support for D3AZ75 as seed ortholog is 99%.
Bootstrap support for Q7RRP6 as seed ortholog is 99%.

Group of orthologs #219. Best score 344 bits
Score difference with first non-orthologous sequence - P.pallidum:344 P.yoelii:344

D3BPW8              	100.00%		Q7RG73              	100.00%
Bootstrap support for D3BPW8 as seed ortholog is 100%.
Bootstrap support for Q7RG73 as seed ortholog is 100%.

Group of orthologs #220. Best score 342 bits
Score difference with first non-orthologous sequence - P.pallidum:342 P.yoelii:342

D3BCL2              	100.00%		Q7RR29              	100.00%
Bootstrap support for D3BCL2 as seed ortholog is 100%.
Bootstrap support for Q7RR29 as seed ortholog is 100%.

Group of orthologs #221. Best score 339 bits
Score difference with first non-orthologous sequence - P.pallidum:339 P.yoelii:339

D3BM76              	100.00%		Q7RFK9              	100.00%
Bootstrap support for D3BM76 as seed ortholog is 100%.
Bootstrap support for Q7RFK9 as seed ortholog is 100%.

Group of orthologs #222. Best score 339 bits
Score difference with first non-orthologous sequence - P.pallidum:339 P.yoelii:339

D3BU83              	100.00%		Q7RMY3              	100.00%
Bootstrap support for D3BU83 as seed ortholog is 100%.
Bootstrap support for Q7RMY3 as seed ortholog is 100%.

Group of orthologs #223. Best score 339 bits
Score difference with first non-orthologous sequence - P.pallidum:119 P.yoelii:339

D3BNT7              	100.00%		Q7RTH4              	100.00%
Bootstrap support for D3BNT7 as seed ortholog is 99%.
Bootstrap support for Q7RTH4 as seed ortholog is 100%.

Group of orthologs #224. Best score 338 bits
Score difference with first non-orthologous sequence - P.pallidum:338 P.yoelii:338

D3B3Z7              	100.00%		Q7RT58              	100.00%
Bootstrap support for D3B3Z7 as seed ortholog is 100%.
Bootstrap support for Q7RT58 as seed ortholog is 100%.

Group of orthologs #225. Best score 338 bits
Score difference with first non-orthologous sequence - P.pallidum:338 P.yoelii:338

D3BS65              	100.00%		Q7RHE8              	100.00%
Bootstrap support for D3BS65 as seed ortholog is 100%.
Bootstrap support for Q7RHE8 as seed ortholog is 100%.

Group of orthologs #226. Best score 337 bits
Score difference with first non-orthologous sequence - P.pallidum:337 P.yoelii:337

D3BBM5              	100.00%		Q7RR21              	100.00%
Bootstrap support for D3BBM5 as seed ortholog is 100%.
Bootstrap support for Q7RR21 as seed ortholog is 100%.

Group of orthologs #227. Best score 336 bits
Score difference with first non-orthologous sequence - P.pallidum:207 P.yoelii:336

D3BVG6              	100.00%		Q7PDP1              	100.00%
D3AY71              	21.83%		
Bootstrap support for D3BVG6 as seed ortholog is 99%.
Bootstrap support for Q7PDP1 as seed ortholog is 100%.

Group of orthologs #228. Best score 336 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:249

D3B9A5              	100.00%		Q7RE33              	100.00%
Bootstrap support for D3B9A5 as seed ortholog is 99%.
Bootstrap support for Q7RE33 as seed ortholog is 100%.

Group of orthologs #229. Best score 335 bits
Score difference with first non-orthologous sequence - P.pallidum:335 P.yoelii:335

D3BJC7              	100.00%		Q7RBC1              	100.00%
Bootstrap support for D3BJC7 as seed ortholog is 100%.
Bootstrap support for Q7RBC1 as seed ortholog is 100%.

Group of orthologs #230. Best score 334 bits
Score difference with first non-orthologous sequence - P.pallidum:285 P.yoelii:334

D3B0D6              	100.00%		Q7RDQ4              	100.00%
Bootstrap support for D3B0D6 as seed ortholog is 100%.
Bootstrap support for Q7RDQ4 as seed ortholog is 100%.

Group of orthologs #231. Best score 334 bits
Score difference with first non-orthologous sequence - P.pallidum:195 P.yoelii:334

D3B2H8              	100.00%		Q7RK26              	100.00%
Bootstrap support for D3B2H8 as seed ortholog is 100%.
Bootstrap support for Q7RK26 as seed ortholog is 100%.

Group of orthologs #232. Best score 334 bits
Score difference with first non-orthologous sequence - P.pallidum:334 P.yoelii:242

D3BFD7              	100.00%		Q7RGK3              	100.00%
Bootstrap support for D3BFD7 as seed ortholog is 100%.
Bootstrap support for Q7RGK3 as seed ortholog is 100%.

Group of orthologs #233. Best score 334 bits
Score difference with first non-orthologous sequence - P.pallidum:334 P.yoelii:334

D3BQ86              	100.00%		Q7RGA4              	100.00%
Bootstrap support for D3BQ86 as seed ortholog is 100%.
Bootstrap support for Q7RGA4 as seed ortholog is 100%.

Group of orthologs #234. Best score 333 bits
Score difference with first non-orthologous sequence - P.pallidum:333 P.yoelii:216

D3BN56              	100.00%		Q7RME3              	100.00%
Bootstrap support for D3BN56 as seed ortholog is 100%.
Bootstrap support for Q7RME3 as seed ortholog is 100%.

Group of orthologs #235. Best score 332 bits
Score difference with first non-orthologous sequence - P.pallidum:332 P.yoelii:215

D3B568              	100.00%		Q7RGG2              	100.00%
Bootstrap support for D3B568 as seed ortholog is 100%.
Bootstrap support for Q7RGG2 as seed ortholog is 99%.

Group of orthologs #236. Best score 329 bits
Score difference with first non-orthologous sequence - P.pallidum:329 P.yoelii:329

D3AVG7              	100.00%		Q7RK04              	100.00%
Bootstrap support for D3AVG7 as seed ortholog is 100%.
Bootstrap support for Q7RK04 as seed ortholog is 100%.

Group of orthologs #237. Best score 329 bits
Score difference with first non-orthologous sequence - P.pallidum:329 P.yoelii:329

D3BAM6              	100.00%		Q7RNR9              	100.00%
Bootstrap support for D3BAM6 as seed ortholog is 100%.
Bootstrap support for Q7RNR9 as seed ortholog is 100%.

Group of orthologs #238. Best score 328 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:140

D3BK57              	100.00%		Q7RA71              	100.00%
Bootstrap support for D3BK57 as seed ortholog is 99%.
Bootstrap support for Q7RA71 as seed ortholog is 99%.

Group of orthologs #239. Best score 327 bits
Score difference with first non-orthologous sequence - P.pallidum:327 P.yoelii:76

D3BF27              	100.00%		Q7RKA1              	100.00%
Bootstrap support for D3BF27 as seed ortholog is 100%.
Bootstrap support for Q7RKA1 as seed ortholog is 88%.

Group of orthologs #240. Best score 327 bits
Score difference with first non-orthologous sequence - P.pallidum:327 P.yoelii:327

D3BP70              	100.00%		Q7REZ9              	100.00%
Bootstrap support for D3BP70 as seed ortholog is 100%.
Bootstrap support for Q7REZ9 as seed ortholog is 100%.

Group of orthologs #241. Best score 326 bits
Score difference with first non-orthologous sequence - P.pallidum:199 P.yoelii:326

D3B6D9              	100.00%		Q7RNI5              	100.00%
Bootstrap support for D3B6D9 as seed ortholog is 99%.
Bootstrap support for Q7RNI5 as seed ortholog is 100%.

Group of orthologs #242. Best score 326 bits
Score difference with first non-orthologous sequence - P.pallidum:326 P.yoelii:224

D3BC39              	100.00%		Q7RQ31              	100.00%
Bootstrap support for D3BC39 as seed ortholog is 100%.
Bootstrap support for Q7RQ31 as seed ortholog is 100%.

Group of orthologs #243. Best score 324 bits
Score difference with first non-orthologous sequence - P.pallidum:324 P.yoelii:324

D3AY97              	100.00%		Q7RJF0              	100.00%
Bootstrap support for D3AY97 as seed ortholog is 100%.
Bootstrap support for Q7RJF0 as seed ortholog is 100%.

Group of orthologs #244. Best score 323 bits
Score difference with first non-orthologous sequence - P.pallidum:323 P.yoelii:323

D3B6G8              	100.00%		Q7RA04              	100.00%
Bootstrap support for D3B6G8 as seed ortholog is 100%.
Bootstrap support for Q7RA04 as seed ortholog is 100%.

Group of orthologs #245. Best score 323 bits
Score difference with first non-orthologous sequence - P.pallidum:207 P.yoelii:323

D3BCL5              	100.00%		Q7RCR0              	100.00%
Bootstrap support for D3BCL5 as seed ortholog is 99%.
Bootstrap support for Q7RCR0 as seed ortholog is 100%.

Group of orthologs #246. Best score 322 bits
Score difference with first non-orthologous sequence - P.pallidum:322 P.yoelii:322

D3BHB5              	100.00%		Q7RHB7              	100.00%
Bootstrap support for D3BHB5 as seed ortholog is 100%.
Bootstrap support for Q7RHB7 as seed ortholog is 100%.

Group of orthologs #247. Best score 320 bits
Score difference with first non-orthologous sequence - P.pallidum:36 P.yoelii:191

D3BIR2              	100.00%		Q7RSF6              	100.00%
Bootstrap support for D3BIR2 as seed ortholog is 80%.
Bootstrap support for Q7RSF6 as seed ortholog is 100%.

Group of orthologs #248. Best score 318 bits
Score difference with first non-orthologous sequence - P.pallidum:318 P.yoelii:318

D3AZB0              	100.00%		Q7R936              	100.00%
Bootstrap support for D3AZB0 as seed ortholog is 100%.
Bootstrap support for Q7R936 as seed ortholog is 100%.

Group of orthologs #249. Best score 317 bits
Score difference with first non-orthologous sequence - P.pallidum:317 P.yoelii:317

D3B501              	100.00%		Q7PDJ8              	100.00%
Bootstrap support for D3B501 as seed ortholog is 100%.
Bootstrap support for Q7PDJ8 as seed ortholog is 100%.

Group of orthologs #250. Best score 317 bits
Score difference with first non-orthologous sequence - P.pallidum:75 P.yoelii:317

D3B9P6              	100.00%		Q7RLG6              	100.00%
Bootstrap support for D3B9P6 as seed ortholog is 96%.
Bootstrap support for Q7RLG6 as seed ortholog is 100%.

Group of orthologs #251. Best score 316 bits
Score difference with first non-orthologous sequence - P.pallidum:188 P.yoelii:316

D3BB49              	100.00%		Q7R715              	100.00%
D3BUW0              	22.45%		
Bootstrap support for D3BB49 as seed ortholog is 100%.
Bootstrap support for Q7R715 as seed ortholog is 100%.

Group of orthologs #252. Best score 316 bits
Score difference with first non-orthologous sequence - P.pallidum:316 P.yoelii:316

D3BQI1              	100.00%		Q7RQE1              	100.00%
Bootstrap support for D3BQI1 as seed ortholog is 100%.
Bootstrap support for Q7RQE1 as seed ortholog is 100%.

Group of orthologs #253. Best score 315 bits
Score difference with first non-orthologous sequence - P.pallidum:315 P.yoelii:315

D3B7J9              	100.00%		Q7RA48              	100.00%
Bootstrap support for D3B7J9 as seed ortholog is 100%.
Bootstrap support for Q7RA48 as seed ortholog is 100%.

Group of orthologs #254. Best score 315 bits
Score difference with first non-orthologous sequence - P.pallidum:315 P.yoelii:315

D3B4P1              	100.00%		Q7RP01              	100.00%
Bootstrap support for D3B4P1 as seed ortholog is 100%.
Bootstrap support for Q7RP01 as seed ortholog is 100%.

Group of orthologs #255. Best score 314 bits
Score difference with first non-orthologous sequence - P.pallidum:314 P.yoelii:216

D3AZM5              	100.00%		Q7RRW5              	100.00%
Bootstrap support for D3AZM5 as seed ortholog is 100%.
Bootstrap support for Q7RRW5 as seed ortholog is 100%.

Group of orthologs #256. Best score 312 bits
Score difference with first non-orthologous sequence - P.pallidum:312 P.yoelii:312

D3BQG1              	100.00%		Q7RP41              	100.00%
Bootstrap support for D3BQG1 as seed ortholog is 100%.
Bootstrap support for Q7RP41 as seed ortholog is 100%.

Group of orthologs #257. Best score 312 bits
Score difference with first non-orthologous sequence - P.pallidum:312 P.yoelii:312

D3BT51              	100.00%		Q7RTC8              	100.00%
Bootstrap support for D3BT51 as seed ortholog is 100%.
Bootstrap support for Q7RTC8 as seed ortholog is 100%.

Group of orthologs #258. Best score 311 bits
Score difference with first non-orthologous sequence - P.pallidum:259 P.yoelii:230

D3BBG6              	100.00%		Q7RH93              	100.00%
Bootstrap support for D3BBG6 as seed ortholog is 100%.
Bootstrap support for Q7RH93 as seed ortholog is 100%.

Group of orthologs #259. Best score 309 bits
Score difference with first non-orthologous sequence - P.pallidum:309 P.yoelii:309

D3BQX1              	100.00%		Q7RGR2              	100.00%
Bootstrap support for D3BQX1 as seed ortholog is 100%.
Bootstrap support for Q7RGR2 as seed ortholog is 100%.

Group of orthologs #260. Best score 309 bits
Score difference with first non-orthologous sequence - P.pallidum:127 P.yoelii:309

D3BSC0              	100.00%		Q7RQR2              	100.00%
Bootstrap support for D3BSC0 as seed ortholog is 99%.
Bootstrap support for Q7RQR2 as seed ortholog is 100%.

Group of orthologs #261. Best score 308 bits
Score difference with first non-orthologous sequence - P.pallidum:308 P.yoelii:308

D3AY61              	100.00%		Q7RL41              	100.00%
Bootstrap support for D3AY61 as seed ortholog is 100%.
Bootstrap support for Q7RL41 as seed ortholog is 100%.

Group of orthologs #262. Best score 307 bits
Score difference with first non-orthologous sequence - P.pallidum:210 P.yoelii:307

D3BNN4              	100.00%		Q7RG53              	100.00%
Bootstrap support for D3BNN4 as seed ortholog is 100%.
Bootstrap support for Q7RG53 as seed ortholog is 100%.

Group of orthologs #263. Best score 307 bits
Score difference with first non-orthologous sequence - P.pallidum:156 P.yoelii:307

D3BFF8              	100.00%		Q7RPM0              	100.00%
Bootstrap support for D3BFF8 as seed ortholog is 99%.
Bootstrap support for Q7RPM0 as seed ortholog is 100%.

Group of orthologs #264. Best score 306 bits
Score difference with first non-orthologous sequence - P.pallidum:144 P.yoelii:248

D3AVX5              	100.00%		Q7RNH6              	100.00%
Bootstrap support for D3AVX5 as seed ortholog is 100%.
Bootstrap support for Q7RNH6 as seed ortholog is 100%.

Group of orthologs #265. Best score 306 bits
Score difference with first non-orthologous sequence - P.pallidum:306 P.yoelii:306

D3BBL0              	100.00%		Q7RL26              	100.00%
Bootstrap support for D3BBL0 as seed ortholog is 100%.
Bootstrap support for Q7RL26 as seed ortholog is 100%.

Group of orthologs #266. Best score 305 bits
Score difference with first non-orthologous sequence - P.pallidum:88 P.yoelii:305

D3B626              	100.00%		Q7REC5              	100.00%
                    	       		Q7RSZ1              	65.04%
Bootstrap support for D3B626 as seed ortholog is 99%.
Bootstrap support for Q7REC5 as seed ortholog is 100%.

Group of orthologs #267. Best score 305 bits
Score difference with first non-orthologous sequence - P.pallidum:123 P.yoelii:130

D3B6C6              	100.00%		Q7R7I5              	100.00%
Bootstrap support for D3B6C6 as seed ortholog is 99%.
Bootstrap support for Q7R7I5 as seed ortholog is 99%.

Group of orthologs #268. Best score 305 bits
Score difference with first non-orthologous sequence - P.pallidum:305 P.yoelii:305

D3AYA8              	100.00%		Q7RLA3              	100.00%
Bootstrap support for D3AYA8 as seed ortholog is 100%.
Bootstrap support for Q7RLA3 as seed ortholog is 100%.

Group of orthologs #269. Best score 305 bits
Score difference with first non-orthologous sequence - P.pallidum:305 P.yoelii:305

D3AXC9              	100.00%		Q7RPV4              	100.00%
Bootstrap support for D3AXC9 as seed ortholog is 100%.
Bootstrap support for Q7RPV4 as seed ortholog is 100%.

Group of orthologs #270. Best score 303 bits
Score difference with first non-orthologous sequence - P.pallidum:249 P.yoelii:303

D3AWT2              	100.00%		Q7RJW7              	100.00%
Bootstrap support for D3AWT2 as seed ortholog is 100%.
Bootstrap support for Q7RJW7 as seed ortholog is 100%.

Group of orthologs #271. Best score 303 bits
Score difference with first non-orthologous sequence - P.pallidum:303 P.yoelii:303

D3B6X9              	100.00%		Q7RJV8              	100.00%
Bootstrap support for D3B6X9 as seed ortholog is 100%.
Bootstrap support for Q7RJV8 as seed ortholog is 100%.

Group of orthologs #272. Best score 302 bits
Score difference with first non-orthologous sequence - P.pallidum:302 P.yoelii:302

D3B3L3              	100.00%		Q7RQX2              	100.00%
Bootstrap support for D3B3L3 as seed ortholog is 100%.
Bootstrap support for Q7RQX2 as seed ortholog is 100%.

Group of orthologs #273. Best score 301 bits
Score difference with first non-orthologous sequence - P.pallidum:301 P.yoelii:301

D3B0U2              	100.00%		Q7RQA7              	100.00%
Bootstrap support for D3B0U2 as seed ortholog is 100%.
Bootstrap support for Q7RQA7 as seed ortholog is 100%.

Group of orthologs #274. Best score 299 bits
Score difference with first non-orthologous sequence - P.pallidum:139 P.yoelii:299

D3B1J5              	100.00%		Q7RI28              	100.00%
Bootstrap support for D3B1J5 as seed ortholog is 99%.
Bootstrap support for Q7RI28 as seed ortholog is 100%.

Group of orthologs #275. Best score 299 bits
Score difference with first non-orthologous sequence - P.pallidum:299 P.yoelii:299

D3BKC5              	100.00%		Q7RPG6              	100.00%
Bootstrap support for D3BKC5 as seed ortholog is 100%.
Bootstrap support for Q7RPG6 as seed ortholog is 100%.

Group of orthologs #276. Best score 298 bits
Score difference with first non-orthologous sequence - P.pallidum:152 P.yoelii:145

D3BET6              	100.00%		Q7RPT9              	100.00%
Bootstrap support for D3BET6 as seed ortholog is 98%.
Bootstrap support for Q7RPT9 as seed ortholog is 97%.

Group of orthologs #277. Best score 297 bits
Score difference with first non-orthologous sequence - P.pallidum:297 P.yoelii:181

D3AZG6              	100.00%		Q7REH8              	100.00%
Bootstrap support for D3AZG6 as seed ortholog is 100%.
Bootstrap support for Q7REH8 as seed ortholog is 100%.

Group of orthologs #278. Best score 297 bits
Score difference with first non-orthologous sequence - P.pallidum:297 P.yoelii:297

D3BII4              	100.00%		Q7R8Q5              	100.00%
Bootstrap support for D3BII4 as seed ortholog is 100%.
Bootstrap support for Q7R8Q5 as seed ortholog is 100%.

Group of orthologs #279. Best score 295 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:99

D3B3T9              	100.00%		Q7RFY0              	100.00%
Bootstrap support for D3B3T9 as seed ortholog is 99%.
Bootstrap support for Q7RFY0 as seed ortholog is 100%.

Group of orthologs #280. Best score 295 bits
Score difference with first non-orthologous sequence - P.pallidum:295 P.yoelii:295

D3BDY0              	100.00%		Q7RB61              	100.00%
Bootstrap support for D3BDY0 as seed ortholog is 100%.
Bootstrap support for Q7RB61 as seed ortholog is 100%.

Group of orthologs #281. Best score 294 bits
Score difference with first non-orthologous sequence - P.pallidum:294 P.yoelii:294

D3B3Z0              	100.00%		Q7RMI2              	100.00%
Bootstrap support for D3B3Z0 as seed ortholog is 100%.
Bootstrap support for Q7RMI2 as seed ortholog is 100%.

Group of orthologs #282. Best score 293 bits
Score difference with first non-orthologous sequence - P.pallidum:293 P.yoelii:293

D3BKN6              	100.00%		Q7RG95              	100.00%
Bootstrap support for D3BKN6 as seed ortholog is 100%.
Bootstrap support for Q7RG95 as seed ortholog is 100%.

Group of orthologs #283. Best score 292 bits
Score difference with first non-orthologous sequence - P.pallidum:292 P.yoelii:292

D3B4I5              	100.00%		Q7RE54              	100.00%
Bootstrap support for D3B4I5 as seed ortholog is 100%.
Bootstrap support for Q7RE54 as seed ortholog is 100%.

Group of orthologs #284. Best score 290 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:179

D3BE97              	100.00%		Q7RS49              	100.00%
Bootstrap support for D3BE97 as seed ortholog is 99%.
Bootstrap support for Q7RS49 as seed ortholog is 100%.

Group of orthologs #285. Best score 290 bits
Score difference with first non-orthologous sequence - P.pallidum:178 P.yoelii:119

D3BUD0              	100.00%		Q7RLR4              	100.00%
Bootstrap support for D3BUD0 as seed ortholog is 99%.
Bootstrap support for Q7RLR4 as seed ortholog is 99%.

Group of orthologs #286. Best score 289 bits
Score difference with first non-orthologous sequence - P.pallidum:289 P.yoelii:289

D3BCX3              	100.00%		Q7RSE2              	100.00%
Bootstrap support for D3BCX3 as seed ortholog is 100%.
Bootstrap support for Q7RSE2 as seed ortholog is 100%.

Group of orthologs #287. Best score 286 bits
Score difference with first non-orthologous sequence - P.pallidum:286 P.yoelii:286

D3B6R2              	100.00%		Q7RS20              	100.00%
Bootstrap support for D3B6R2 as seed ortholog is 100%.
Bootstrap support for Q7RS20 as seed ortholog is 100%.

Group of orthologs #288. Best score 285 bits
Score difference with first non-orthologous sequence - P.pallidum:285 P.yoelii:285

D3AX76              	100.00%		Q7RRQ9              	100.00%
Bootstrap support for D3AX76 as seed ortholog is 100%.
Bootstrap support for Q7RRQ9 as seed ortholog is 100%.

Group of orthologs #289. Best score 285 bits
Score difference with first non-orthologous sequence - P.pallidum:285 P.yoelii:285

D3B5K4              	100.00%		Q7RSZ8              	100.00%
Bootstrap support for D3B5K4 as seed ortholog is 100%.
Bootstrap support for Q7RSZ8 as seed ortholog is 100%.

Group of orthologs #290. Best score 285 bits
Score difference with first non-orthologous sequence - P.pallidum:285 P.yoelii:285

D3BQ29              	100.00%		Q7RIX2              	100.00%
Bootstrap support for D3BQ29 as seed ortholog is 100%.
Bootstrap support for Q7RIX2 as seed ortholog is 100%.

Group of orthologs #291. Best score 284 bits
Score difference with first non-orthologous sequence - P.pallidum:284 P.yoelii:284

D3BLP0              	100.00%		Q7R7Z3              	100.00%
Bootstrap support for D3BLP0 as seed ortholog is 100%.
Bootstrap support for Q7R7Z3 as seed ortholog is 100%.

Group of orthologs #292. Best score 282 bits
Score difference with first non-orthologous sequence - P.pallidum:282 P.yoelii:282

D3B606              	100.00%		Q7RGE4              	100.00%
Bootstrap support for D3B606 as seed ortholog is 100%.
Bootstrap support for Q7RGE4 as seed ortholog is 100%.

Group of orthologs #293. Best score 282 bits
Score difference with first non-orthologous sequence - P.pallidum:177 P.yoelii:282

D3B725              	100.00%		Q7RM44              	100.00%
Bootstrap support for D3B725 as seed ortholog is 99%.
Bootstrap support for Q7RM44 as seed ortholog is 100%.

Group of orthologs #294. Best score 282 bits
Score difference with first non-orthologous sequence - P.pallidum:234 P.yoelii:282

D3BNF4              	100.00%		Q7RK07              	100.00%
Bootstrap support for D3BNF4 as seed ortholog is 100%.
Bootstrap support for Q7RK07 as seed ortholog is 100%.

Group of orthologs #295. Best score 282 bits
Score difference with first non-orthologous sequence - P.pallidum:282 P.yoelii:282

D3BKY4              	100.00%		Q7RNG9              	100.00%
Bootstrap support for D3BKY4 as seed ortholog is 100%.
Bootstrap support for Q7RNG9 as seed ortholog is 100%.

Group of orthologs #296. Best score 281 bits
Score difference with first non-orthologous sequence - P.pallidum:281 P.yoelii:281

D3B2J9              	100.00%		Q7RP98              	100.00%
Bootstrap support for D3B2J9 as seed ortholog is 100%.
Bootstrap support for Q7RP98 as seed ortholog is 100%.

Group of orthologs #297. Best score 279 bits
Score difference with first non-orthologous sequence - P.pallidum:279 P.yoelii:279

D3B3A5              	100.00%		Q7RGU1              	100.00%
Bootstrap support for D3B3A5 as seed ortholog is 100%.
Bootstrap support for Q7RGU1 as seed ortholog is 100%.

Group of orthologs #298. Best score 278 bits
Score difference with first non-orthologous sequence - P.pallidum:224 P.yoelii:162

D3BMN0              	100.00%		Q7RCW0              	100.00%
Bootstrap support for D3BMN0 as seed ortholog is 100%.
Bootstrap support for Q7RCW0 as seed ortholog is 99%.

Group of orthologs #299. Best score 277 bits
Score difference with first non-orthologous sequence - P.pallidum:277 P.yoelii:201

D3B3M9              	100.00%		Q7RPH9              	100.00%
Bootstrap support for D3B3M9 as seed ortholog is 100%.
Bootstrap support for Q7RPH9 as seed ortholog is 100%.

Group of orthologs #300. Best score 274 bits
Score difference with first non-orthologous sequence - P.pallidum:39 P.yoelii:274

D3B892              	100.00%		Q7RGW4              	100.00%
Bootstrap support for D3B892 as seed ortholog is 66%.
Alternative seed ortholog is D3B6Z6 (39 bits away from this cluster)
Bootstrap support for Q7RGW4 as seed ortholog is 100%.

Group of orthologs #301. Best score 274 bits
Score difference with first non-orthologous sequence - P.pallidum:274 P.yoelii:274

D3B6K6              	100.00%		Q7RQ85              	100.00%
Bootstrap support for D3B6K6 as seed ortholog is 100%.
Bootstrap support for Q7RQ85 as seed ortholog is 100%.

Group of orthologs #302. Best score 273 bits
Score difference with first non-orthologous sequence - P.pallidum:273 P.yoelii:273

D3BKE2              	100.00%		Q7RSM1              	100.00%
D3AYR9              	10.18%		
D3AWU2              	8.43%		
Bootstrap support for D3BKE2 as seed ortholog is 100%.
Bootstrap support for Q7RSM1 as seed ortholog is 100%.

Group of orthologs #303. Best score 272 bits
Score difference with first non-orthologous sequence - P.pallidum:272 P.yoelii:183

D3B0N9              	100.00%		Q7REV6              	100.00%
Bootstrap support for D3B0N9 as seed ortholog is 100%.
Bootstrap support for Q7REV6 as seed ortholog is 100%.

Group of orthologs #304. Best score 269 bits
Score difference with first non-orthologous sequence - P.pallidum:269 P.yoelii:269

D3B0C3              	100.00%		Q7RH92              	100.00%
Bootstrap support for D3B0C3 as seed ortholog is 100%.
Bootstrap support for Q7RH92 as seed ortholog is 100%.

Group of orthologs #305. Best score 269 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:188

D3B770              	100.00%		Q7RK69              	100.00%
Bootstrap support for D3B770 as seed ortholog is 100%.
Bootstrap support for Q7RK69 as seed ortholog is 100%.

Group of orthologs #306. Best score 269 bits
Score difference with first non-orthologous sequence - P.pallidum:269 P.yoelii:269

D3BRX2              	100.00%		Q7RP06              	100.00%
Bootstrap support for D3BRX2 as seed ortholog is 100%.
Bootstrap support for Q7RP06 as seed ortholog is 100%.

Group of orthologs #307. Best score 268 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:268

D3AVW9              	100.00%		Q7REK1              	100.00%
Bootstrap support for D3AVW9 as seed ortholog is 100%.
Bootstrap support for Q7REK1 as seed ortholog is 100%.

Group of orthologs #308. Best score 268 bits
Score difference with first non-orthologous sequence - P.pallidum:268 P.yoelii:268

D3B298              	100.00%		Q7RAN2              	100.00%
Bootstrap support for D3B298 as seed ortholog is 100%.
Bootstrap support for Q7RAN2 as seed ortholog is 100%.

Group of orthologs #309. Best score 268 bits
Score difference with first non-orthologous sequence - P.pallidum:132 P.yoelii:191

D3BSE8              	100.00%		Q7RM36              	100.00%
Bootstrap support for D3BSE8 as seed ortholog is 100%.
Bootstrap support for Q7RM36 as seed ortholog is 100%.

Group of orthologs #310. Best score 267 bits
Score difference with first non-orthologous sequence - P.pallidum:267 P.yoelii:267

D3B826              	100.00%		Q7REM9              	100.00%
D3BK48              	35.11%		
D3B5K6              	17.28%		
D3B193              	15.26%		
D3BMG7              	15.07%		
D3BMG8              	14.67%		
D3AZX8              	14.55%		
D3BMG9              	13.17%		
Bootstrap support for D3B826 as seed ortholog is 100%.
Bootstrap support for Q7REM9 as seed ortholog is 100%.

Group of orthologs #311. Best score 267 bits
Score difference with first non-orthologous sequence - P.pallidum:267 P.yoelii:267

D3BER0              	100.00%		Q7RAP0              	100.00%
Bootstrap support for D3BER0 as seed ortholog is 100%.
Bootstrap support for Q7RAP0 as seed ortholog is 100%.

Group of orthologs #312. Best score 264 bits
Score difference with first non-orthologous sequence - P.pallidum:108 P.yoelii:48

D3B5X2              	100.00%		Q7PDQ7              	100.00%
Bootstrap support for D3B5X2 as seed ortholog is 99%.
Bootstrap support for Q7PDQ7 as seed ortholog is 95%.

Group of orthologs #313. Best score 263 bits
Score difference with first non-orthologous sequence - P.pallidum:158 P.yoelii:167

D3B7P1              	100.00%		Q7RGU3              	100.00%
D3BSF4              	17.51%		
Bootstrap support for D3B7P1 as seed ortholog is 100%.
Bootstrap support for Q7RGU3 as seed ortholog is 100%.

Group of orthologs #314. Best score 263 bits
Score difference with first non-orthologous sequence - P.pallidum:184 P.yoelii:263

D3BI40              	100.00%		Q7R993              	100.00%
Bootstrap support for D3BI40 as seed ortholog is 100%.
Bootstrap support for Q7R993 as seed ortholog is 100%.

Group of orthologs #315. Best score 263 bits
Score difference with first non-orthologous sequence - P.pallidum:144 P.yoelii:263

D3BBN6              	100.00%		Q7RMT4              	100.00%
Bootstrap support for D3BBN6 as seed ortholog is 100%.
Bootstrap support for Q7RMT4 as seed ortholog is 100%.

Group of orthologs #316. Best score 262 bits
Score difference with first non-orthologous sequence - P.pallidum:262 P.yoelii:262

D3B6I9              	100.00%		Q7RA47              	100.00%
D3BMW0              	7.94%		
D3B3H4              	5.07%		
Bootstrap support for D3B6I9 as seed ortholog is 100%.
Bootstrap support for Q7RA47 as seed ortholog is 100%.

Group of orthologs #317. Best score 262 bits
Score difference with first non-orthologous sequence - P.pallidum:262 P.yoelii:262

D3BSF9              	100.00%		Q7RHI7              	100.00%
Bootstrap support for D3BSF9 as seed ortholog is 100%.
Bootstrap support for Q7RHI7 as seed ortholog is 100%.

Group of orthologs #318. Best score 261 bits
Score difference with first non-orthologous sequence - P.pallidum:25 P.yoelii:119

D3BGU2              	100.00%		Q7RE15              	100.00%
Bootstrap support for D3BGU2 as seed ortholog is 77%.
Bootstrap support for Q7RE15 as seed ortholog is 99%.

Group of orthologs #319. Best score 261 bits
Score difference with first non-orthologous sequence - P.pallidum:39 P.yoelii:49

D3BDH0              	100.00%		Q7RJE5              	100.00%
Bootstrap support for D3BDH0 as seed ortholog is 76%.
Bootstrap support for Q7RJE5 as seed ortholog is 86%.

Group of orthologs #320. Best score 261 bits
Score difference with first non-orthologous sequence - P.pallidum:150 P.yoelii:261

D3BTG9              	100.00%		Q7R8R3              	100.00%
Bootstrap support for D3BTG9 as seed ortholog is 100%.
Bootstrap support for Q7R8R3 as seed ortholog is 100%.

Group of orthologs #321. Best score 261 bits
Score difference with first non-orthologous sequence - P.pallidum:261 P.yoelii:261

D3BKM5              	100.00%		Q7RGZ7              	100.00%
Bootstrap support for D3BKM5 as seed ortholog is 100%.
Bootstrap support for Q7RGZ7 as seed ortholog is 100%.

Group of orthologs #322. Best score 260 bits
Score difference with first non-orthologous sequence - P.pallidum:260 P.yoelii:47

D3BMN8              	100.00%		Q7RM08              	100.00%
Bootstrap support for D3BMN8 as seed ortholog is 100%.
Bootstrap support for Q7RM08 as seed ortholog is 87%.

Group of orthologs #323. Best score 259 bits
Score difference with first non-orthologous sequence - P.pallidum:259 P.yoelii:259

D3B1Z3              	100.00%		Q7RMG2              	100.00%
Bootstrap support for D3B1Z3 as seed ortholog is 100%.
Bootstrap support for Q7RMG2 as seed ortholog is 100%.

Group of orthologs #324. Best score 259 bits
Score difference with first non-orthologous sequence - P.pallidum:198 P.yoelii:259

D3BBM4              	100.00%		Q7RMW1              	100.00%
Bootstrap support for D3BBM4 as seed ortholog is 100%.
Bootstrap support for Q7RMW1 as seed ortholog is 100%.

Group of orthologs #325. Best score 259 bits
Score difference with first non-orthologous sequence - P.pallidum:259 P.yoelii:259

D3BQU1              	100.00%		Q7R935              	100.00%
Bootstrap support for D3BQU1 as seed ortholog is 100%.
Bootstrap support for Q7R935 as seed ortholog is 100%.

Group of orthologs #326. Best score 259 bits
Score difference with first non-orthologous sequence - P.pallidum:259 P.yoelii:259

D3BRK4              	100.00%		Q7RBT0              	100.00%
Bootstrap support for D3BRK4 as seed ortholog is 100%.
Bootstrap support for Q7RBT0 as seed ortholog is 100%.

Group of orthologs #327. Best score 257 bits
Score difference with first non-orthologous sequence - P.pallidum:257 P.yoelii:257

D3AXH6              	100.00%		Q7RBX4              	100.00%
Bootstrap support for D3AXH6 as seed ortholog is 100%.
Bootstrap support for Q7RBX4 as seed ortholog is 100%.

Group of orthologs #328. Best score 256 bits
Score difference with first non-orthologous sequence - P.pallidum:256 P.yoelii:256

D3BAC7              	100.00%		Q7RDU2              	100.00%
                    	       		Q7RD99              	10.50%
Bootstrap support for D3BAC7 as seed ortholog is 100%.
Bootstrap support for Q7RDU2 as seed ortholog is 100%.

Group of orthologs #329. Best score 256 bits
Score difference with first non-orthologous sequence - P.pallidum:103 P.yoelii:137

D3BBP5              	100.00%		Q7R9F4              	100.00%
Bootstrap support for D3BBP5 as seed ortholog is 100%.
Bootstrap support for Q7R9F4 as seed ortholog is 100%.

Group of orthologs #330. Best score 256 bits
Score difference with first non-orthologous sequence - P.pallidum:95 P.yoelii:80

D3B9E0              	100.00%		Q7RPG7              	100.00%
Bootstrap support for D3B9E0 as seed ortholog is 99%.
Bootstrap support for Q7RPG7 as seed ortholog is 93%.

Group of orthologs #331. Best score 255 bits
Score difference with first non-orthologous sequence - P.pallidum:255 P.yoelii:255

D3B5U9              	100.00%		Q7RNK0              	100.00%
Bootstrap support for D3B5U9 as seed ortholog is 100%.
Bootstrap support for Q7RNK0 as seed ortholog is 100%.

Group of orthologs #332. Best score 255 bits
Score difference with first non-orthologous sequence - P.pallidum:87 P.yoelii:151

D3BEC0              	100.00%		Q7RH96              	100.00%
Bootstrap support for D3BEC0 as seed ortholog is 99%.
Bootstrap support for Q7RH96 as seed ortholog is 99%.

Group of orthologs #333. Best score 255 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:255

D3BQN8              	100.00%		Q7RDM0              	100.00%
Bootstrap support for D3BQN8 as seed ortholog is 92%.
Bootstrap support for Q7RDM0 as seed ortholog is 100%.

Group of orthologs #334. Best score 255 bits
Score difference with first non-orthologous sequence - P.pallidum:10 P.yoelii:81

D3BJM0              	100.00%		Q7RTG4              	100.00%
Bootstrap support for D3BJM0 as seed ortholog is 72%.
Alternative seed ortholog is D3BIP5 (10 bits away from this cluster)
Bootstrap support for Q7RTG4 as seed ortholog is 78%.

Group of orthologs #335. Best score 253 bits
Score difference with first non-orthologous sequence - P.pallidum:253 P.yoelii:253

D3B0H6              	100.00%		Q7REZ1              	100.00%
Bootstrap support for D3B0H6 as seed ortholog is 100%.
Bootstrap support for Q7REZ1 as seed ortholog is 100%.

Group of orthologs #336. Best score 253 bits
Score difference with first non-orthologous sequence - P.pallidum:253 P.yoelii:253

D3BAU8              	100.00%		Q7RL15              	100.00%
Bootstrap support for D3BAU8 as seed ortholog is 100%.
Bootstrap support for Q7RL15 as seed ortholog is 100%.

Group of orthologs #337. Best score 252 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:252

D3AVU8              	100.00%		Q7RN74              	100.00%
Bootstrap support for D3AVU8 as seed ortholog is 100%.
Bootstrap support for Q7RN74 as seed ortholog is 100%.

Group of orthologs #338. Best score 252 bits
Score difference with first non-orthologous sequence - P.pallidum:129 P.yoelii:252

D3BAF6              	100.00%		Q7RPS9              	100.00%
Bootstrap support for D3BAF6 as seed ortholog is 99%.
Bootstrap support for Q7RPS9 as seed ortholog is 100%.

Group of orthologs #339. Best score 252 bits
Score difference with first non-orthologous sequence - P.pallidum:252 P.yoelii:252

D3BFF5              	100.00%		Q7RP87              	100.00%
Bootstrap support for D3BFF5 as seed ortholog is 100%.
Bootstrap support for Q7RP87 as seed ortholog is 100%.

Group of orthologs #340. Best score 251 bits
Score difference with first non-orthologous sequence - P.pallidum:50 P.yoelii:251

D3AW40              	100.00%		Q7RAK4              	100.00%
D3B7M2              	22.61%		Q7RP11              	9.69%
Bootstrap support for D3AW40 as seed ortholog is 98%.
Bootstrap support for Q7RAK4 as seed ortholog is 100%.

Group of orthologs #341. Best score 251 bits
Score difference with first non-orthologous sequence - P.pallidum:169 P.yoelii:251

D3B3W0              	100.00%		Q7R7T2              	100.00%
Bootstrap support for D3B3W0 as seed ortholog is 100%.
Bootstrap support for Q7R7T2 as seed ortholog is 100%.

Group of orthologs #342. Best score 247 bits
Score difference with first non-orthologous sequence - P.pallidum:247 P.yoelii:247

D3B3W9              	100.00%		Q7RI33              	100.00%
Bootstrap support for D3B3W9 as seed ortholog is 100%.
Bootstrap support for Q7RI33 as seed ortholog is 100%.

Group of orthologs #343. Best score 246 bits
Score difference with first non-orthologous sequence - P.pallidum:32 P.yoelii:246

D3B846              	100.00%		Q7RKP6              	100.00%
D3BNT8              	9.16%		
Bootstrap support for D3B846 as seed ortholog is 90%.
Bootstrap support for Q7RKP6 as seed ortholog is 100%.

Group of orthologs #344. Best score 246 bits
Score difference with first non-orthologous sequence - P.pallidum:78 P.yoelii:102

D3B2S4              	100.00%		Q7RD85              	100.00%
Bootstrap support for D3B2S4 as seed ortholog is 96%.
Bootstrap support for Q7RD85 as seed ortholog is 99%.

Group of orthologs #345. Best score 245 bits
Score difference with first non-orthologous sequence - P.pallidum:245 P.yoelii:245

D3AZ34              	100.00%		Q7RM41              	100.00%
Bootstrap support for D3AZ34 as seed ortholog is 100%.
Bootstrap support for Q7RM41 as seed ortholog is 100%.

Group of orthologs #346. Best score 245 bits
Score difference with first non-orthologous sequence - P.pallidum:245 P.yoelii:159

D3AZD2              	100.00%		Q7RRU1              	100.00%
Bootstrap support for D3AZD2 as seed ortholog is 100%.
Bootstrap support for Q7RRU1 as seed ortholog is 100%.

Group of orthologs #347. Best score 245 bits
Score difference with first non-orthologous sequence - P.pallidum:245 P.yoelii:245

D3AZF5              	100.00%		Q7RTA1              	100.00%
Bootstrap support for D3AZF5 as seed ortholog is 100%.
Bootstrap support for Q7RTA1 as seed ortholog is 100%.

Group of orthologs #348. Best score 244 bits
Score difference with first non-orthologous sequence - P.pallidum:244 P.yoelii:106

D3BTS5              	100.00%		Q7RR17              	100.00%
Bootstrap support for D3BTS5 as seed ortholog is 100%.
Bootstrap support for Q7RR17 as seed ortholog is 99%.

Group of orthologs #349. Best score 243 bits
Score difference with first non-orthologous sequence - P.pallidum:89 P.yoelii:243

D3BB96              	100.00%		Q7RGR5              	100.00%
Bootstrap support for D3BB96 as seed ortholog is 96%.
Bootstrap support for Q7RGR5 as seed ortholog is 100%.

Group of orthologs #350. Best score 243 bits
Score difference with first non-orthologous sequence - P.pallidum:243 P.yoelii:243

D3BU50              	100.00%		Q7RSJ4              	100.00%
Bootstrap support for D3BU50 as seed ortholog is 100%.
Bootstrap support for Q7RSJ4 as seed ortholog is 100%.

Group of orthologs #351. Best score 242 bits
Score difference with first non-orthologous sequence - P.pallidum:242 P.yoelii:242

D3BTV2              	100.00%		Q7RLS9              	100.00%
Bootstrap support for D3BTV2 as seed ortholog is 100%.
Bootstrap support for Q7RLS9 as seed ortholog is 100%.

Group of orthologs #352. Best score 242 bits
Score difference with first non-orthologous sequence - P.pallidum:84 P.yoelii:113

D3BUX2              	100.00%		Q7RNJ2              	100.00%
Bootstrap support for D3BUX2 as seed ortholog is 99%.
Bootstrap support for Q7RNJ2 as seed ortholog is 99%.

Group of orthologs #353. Best score 241 bits
Score difference with first non-orthologous sequence - P.pallidum:120 P.yoelii:241

D3B7N8              	100.00%		Q7RT46              	100.00%
Bootstrap support for D3B7N8 as seed ortholog is 97%.
Bootstrap support for Q7RT46 as seed ortholog is 100%.

Group of orthologs #354. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:240

D3BQZ8              	100.00%		Q7REL3              	100.00%
                    	       		Q7RJ22              	24.16%
Bootstrap support for D3BQZ8 as seed ortholog is 99%.
Bootstrap support for Q7REL3 as seed ortholog is 100%.

Group of orthologs #355. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:240 P.yoelii:184

D3B6G7              	100.00%		Q7R9U3              	100.00%
Bootstrap support for D3B6G7 as seed ortholog is 100%.
Bootstrap support for Q7R9U3 as seed ortholog is 100%.

Group of orthologs #356. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:240 P.yoelii:240

D3BQU0              	100.00%		Q7R7Q0              	100.00%
Bootstrap support for D3BQU0 as seed ortholog is 100%.
Bootstrap support for Q7R7Q0 as seed ortholog is 100%.

Group of orthologs #357. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:31 P.yoelii:67

D3BE34              	100.00%		Q7RPH1              	100.00%
Bootstrap support for D3BE34 as seed ortholog is 74%.
Alternative seed ortholog is D3AXY2 (31 bits away from this cluster)
Bootstrap support for Q7RPH1 as seed ortholog is 94%.

Group of orthologs #358. Best score 240 bits
Score difference with first non-orthologous sequence - P.pallidum:135 P.yoelii:168

D3BM08              	100.00%		Q7RM37              	100.00%
Bootstrap support for D3BM08 as seed ortholog is 100%.
Bootstrap support for Q7RM37 as seed ortholog is 100%.

Group of orthologs #359. Best score 238 bits
Score difference with first non-orthologous sequence - P.pallidum:238 P.yoelii:238

D3B2T6              	100.00%		Q7RED7              	100.00%
Bootstrap support for D3B2T6 as seed ortholog is 100%.
Bootstrap support for Q7RED7 as seed ortholog is 100%.

Group of orthologs #360. Best score 238 bits
Score difference with first non-orthologous sequence - P.pallidum:178 P.yoelii:238

D3B367              	100.00%		Q7REF8              	100.00%
Bootstrap support for D3B367 as seed ortholog is 100%.
Bootstrap support for Q7REF8 as seed ortholog is 100%.

Group of orthologs #361. Best score 237 bits
Score difference with first non-orthologous sequence - P.pallidum:24 P.yoelii:73

D3B0H3              	100.00%		Q7R8S9              	100.00%
Bootstrap support for D3B0H3 as seed ortholog is 86%.
Bootstrap support for Q7R8S9 as seed ortholog is 99%.

Group of orthologs #362. Best score 237 bits
Score difference with first non-orthologous sequence - P.pallidum:237 P.yoelii:237

D3B6T4              	100.00%		Q7R866              	100.00%
Bootstrap support for D3B6T4 as seed ortholog is 100%.
Bootstrap support for Q7R866 as seed ortholog is 100%.

Group of orthologs #363. Best score 237 bits
Score difference with first non-orthologous sequence - P.pallidum:237 P.yoelii:237

D3BNE3              	100.00%		Q7RD49              	100.00%
Bootstrap support for D3BNE3 as seed ortholog is 100%.
Bootstrap support for Q7RD49 as seed ortholog is 100%.

Group of orthologs #364. Best score 236 bits
Score difference with first non-orthologous sequence - P.pallidum:108 P.yoelii:116

D3BD39              	100.00%		Q7RDK0              	100.00%
D3BD41              	80.33%		
Bootstrap support for D3BD39 as seed ortholog is 99%.
Bootstrap support for Q7RDK0 as seed ortholog is 99%.

Group of orthologs #365. Best score 236 bits
Score difference with first non-orthologous sequence - P.pallidum:236 P.yoelii:236

D3B8D7              	100.00%		Q7RKV1              	100.00%
Bootstrap support for D3B8D7 as seed ortholog is 100%.
Bootstrap support for Q7RKV1 as seed ortholog is 100%.

Group of orthologs #366. Best score 236 bits
Score difference with first non-orthologous sequence - P.pallidum:236 P.yoelii:236

D3B6E5              	100.00%		Q7RQV4              	100.00%
Bootstrap support for D3B6E5 as seed ortholog is 100%.
Bootstrap support for Q7RQV4 as seed ortholog is 100%.

Group of orthologs #367. Best score 235 bits
Score difference with first non-orthologous sequence - P.pallidum:235 P.yoelii:235

D3BJ52              	100.00%		Q7RFM8              	100.00%
Bootstrap support for D3BJ52 as seed ortholog is 100%.
Bootstrap support for Q7RFM8 as seed ortholog is 100%.

Group of orthologs #368. Best score 235 bits
Score difference with first non-orthologous sequence - P.pallidum:235 P.yoelii:122

D3BU07              	100.00%		Q7RSD9              	100.00%
Bootstrap support for D3BU07 as seed ortholog is 100%.
Bootstrap support for Q7RSD9 as seed ortholog is 99%.

Group of orthologs #369. Best score 233 bits
Score difference with first non-orthologous sequence - P.pallidum:26 P.yoelii:27

D3BN54              	100.00%		Q7RFU8              	100.00%
D3BP55              	24.86%		
D3BLV3              	19.89%		
Bootstrap support for D3BN54 as seed ortholog is 85%.
Bootstrap support for Q7RFU8 as seed ortholog is 86%.

Group of orthologs #370. Best score 233 bits
Score difference with first non-orthologous sequence - P.pallidum:233 P.yoelii:233

D3BEA4              	100.00%		Q7RQB8              	100.00%
Bootstrap support for D3BEA4 as seed ortholog is 100%.
Bootstrap support for Q7RQB8 as seed ortholog is 100%.

Group of orthologs #371. Best score 232 bits
Score difference with first non-orthologous sequence - P.pallidum:232 P.yoelii:67

D3BEU0              	100.00%		Q7RBR6              	100.00%
Bootstrap support for D3BEU0 as seed ortholog is 100%.
Bootstrap support for Q7RBR6 as seed ortholog is 91%.

Group of orthologs #372. Best score 232 bits
Score difference with first non-orthologous sequence - P.pallidum:232 P.yoelii:232

D3B1B1              	100.00%		Q7RS53              	100.00%
Bootstrap support for D3B1B1 as seed ortholog is 100%.
Bootstrap support for Q7RS53 as seed ortholog is 100%.

Group of orthologs #373. Best score 231 bits
Score difference with first non-orthologous sequence - P.pallidum:231 P.yoelii:231

D3BUZ2              	100.00%		Q7RJ15              	100.00%
Bootstrap support for D3BUZ2 as seed ortholog is 100%.
Bootstrap support for Q7RJ15 as seed ortholog is 100%.

Group of orthologs #374. Best score 229 bits
Score difference with first non-orthologous sequence - P.pallidum:229 P.yoelii:229

D3AYQ3              	100.00%		Q7RBS1              	100.00%
Bootstrap support for D3AYQ3 as seed ortholog is 100%.
Bootstrap support for Q7RBS1 as seed ortholog is 100%.

Group of orthologs #375. Best score 229 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:135

D3AY59              	100.00%		Q7RP97              	100.00%
Bootstrap support for D3AY59 as seed ortholog is 98%.
Bootstrap support for Q7RP97 as seed ortholog is 100%.

Group of orthologs #376. Best score 229 bits
Score difference with first non-orthologous sequence - P.pallidum:127 P.yoelii:229

D3B4Z6              	100.00%		Q7RPQ6              	100.00%
Bootstrap support for D3B4Z6 as seed ortholog is 99%.
Bootstrap support for Q7RPQ6 as seed ortholog is 100%.

Group of orthologs #377. Best score 228 bits
Score difference with first non-orthologous sequence - P.pallidum:31 P.yoelii:37

D3BQE6              	100.00%		Q7RIF5              	100.00%
D3AYC5              	9.38%		
Bootstrap support for D3BQE6 as seed ortholog is 90%.
Bootstrap support for Q7RIF5 as seed ortholog is 95%.

Group of orthologs #378. Best score 228 bits
Score difference with first non-orthologous sequence - P.pallidum:151 P.yoelii:228

D3AWJ9              	100.00%		Q7RJ53              	100.00%
Bootstrap support for D3AWJ9 as seed ortholog is 100%.
Bootstrap support for Q7RJ53 as seed ortholog is 100%.

Group of orthologs #379. Best score 228 bits
Score difference with first non-orthologous sequence - P.pallidum:18 P.yoelii:52

D3B1S9              	100.00%		Q7RNU6              	100.00%
Bootstrap support for D3B1S9 as seed ortholog is 67%.
Alternative seed ortholog is D3B2B1 (18 bits away from this cluster)
Bootstrap support for Q7RNU6 as seed ortholog is 75%.

Group of orthologs #380. Best score 228 bits
Score difference with first non-orthologous sequence - P.pallidum:228 P.yoelii:228

D3BPW9              	100.00%		Q7RRU9              	100.00%
Bootstrap support for D3BPW9 as seed ortholog is 100%.
Bootstrap support for Q7RRU9 as seed ortholog is 100%.

Group of orthologs #381. Best score 227 bits
Score difference with first non-orthologous sequence - P.pallidum:227 P.yoelii:227

D3BB01              	100.00%		Q7R7N4              	100.00%
Bootstrap support for D3BB01 as seed ortholog is 100%.
Bootstrap support for Q7R7N4 as seed ortholog is 100%.

Group of orthologs #382. Best score 227 bits
Score difference with first non-orthologous sequence - P.pallidum:227 P.yoelii:227

D3BEF1              	100.00%		Q7RJQ3              	100.00%
Bootstrap support for D3BEF1 as seed ortholog is 100%.
Bootstrap support for Q7RJQ3 as seed ortholog is 100%.

Group of orthologs #383. Best score 227 bits
Score difference with first non-orthologous sequence - P.pallidum:227 P.yoelii:227

D3BR69              	100.00%		Q7RJI2              	100.00%
Bootstrap support for D3BR69 as seed ortholog is 100%.
Bootstrap support for Q7RJI2 as seed ortholog is 100%.

Group of orthologs #384. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:142 P.yoelii:14

D3B9T8              	100.00%		Q7R9H2              	100.00%
Bootstrap support for D3B9T8 as seed ortholog is 98%.
Bootstrap support for Q7R9H2 as seed ortholog is 67%.
Alternative seed ortholog is Q7RHT9 (14 bits away from this cluster)

Group of orthologs #385. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:47 P.yoelii:45

D3B0N1              	100.00%		Q7RNM4              	100.00%
Bootstrap support for D3B0N1 as seed ortholog is 99%.
Bootstrap support for Q7RNM4 as seed ortholog is 98%.

Group of orthologs #386. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:225 P.yoelii:225

D3BLC2              	100.00%		Q7R8D2              	100.00%
Bootstrap support for D3BLC2 as seed ortholog is 100%.
Bootstrap support for Q7R8D2 as seed ortholog is 100%.

Group of orthologs #387. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:128 P.yoelii:225

D3B3S8              	100.00%		Q7RTB4              	100.00%
Bootstrap support for D3B3S8 as seed ortholog is 100%.
Bootstrap support for Q7RTB4 as seed ortholog is 100%.

Group of orthologs #388. Best score 225 bits
Score difference with first non-orthologous sequence - P.pallidum:166 P.yoelii:225

D3BQC3              	100.00%		Q7RQ52              	100.00%
Bootstrap support for D3BQC3 as seed ortholog is 100%.
Bootstrap support for Q7RQ52 as seed ortholog is 100%.

Group of orthologs #389. Best score 223 bits
Score difference with first non-orthologous sequence - P.pallidum:223 P.yoelii:223

D3BI16              	100.00%		Q7RP39              	100.00%
D3BS67              	24.68%		
Bootstrap support for D3BI16 as seed ortholog is 100%.
Bootstrap support for Q7RP39 as seed ortholog is 100%.

Group of orthologs #390. Best score 223 bits
Score difference with first non-orthologous sequence - P.pallidum:223 P.yoelii:223

D3BBU3              	100.00%		Q7RGF5              	100.00%
Bootstrap support for D3BBU3 as seed ortholog is 100%.
Bootstrap support for Q7RGF5 as seed ortholog is 100%.

Group of orthologs #391. Best score 223 bits
Score difference with first non-orthologous sequence - P.pallidum:223 P.yoelii:223

D3BCZ8              	100.00%		Q7RI51              	100.00%
Bootstrap support for D3BCZ8 as seed ortholog is 100%.
Bootstrap support for Q7RI51 as seed ortholog is 100%.

Group of orthologs #392. Best score 221 bits
Score difference with first non-orthologous sequence - P.pallidum:46 P.yoelii:36

D3BKT2              	100.00%		Q7RAV5              	100.00%
D3BGZ5              	14.84%		
Bootstrap support for D3BKT2 as seed ortholog is 89%.
Bootstrap support for Q7RAV5 as seed ortholog is 86%.

Group of orthologs #393. Best score 221 bits
Score difference with first non-orthologous sequence - P.pallidum:221 P.yoelii:5

D3B0J5              	100.00%		Q7R6X2              	100.00%
Bootstrap support for D3B0J5 as seed ortholog is 100%.
Bootstrap support for Q7R6X2 as seed ortholog is 54%.
Alternative seed ortholog is Q7RNC2 (5 bits away from this cluster)

Group of orthologs #394. Best score 221 bits
Score difference with first non-orthologous sequence - P.pallidum:221 P.yoelii:221

D3B5K0              	100.00%		Q7RSV1              	100.00%
Bootstrap support for D3B5K0 as seed ortholog is 100%.
Bootstrap support for Q7RSV1 as seed ortholog is 100%.

Group of orthologs #395. Best score 221 bits
Score difference with first non-orthologous sequence - P.pallidum:221 P.yoelii:221

D3BSA3              	100.00%		Q7RIY7              	100.00%
Bootstrap support for D3BSA3 as seed ortholog is 100%.
Bootstrap support for Q7RIY7 as seed ortholog is 100%.

Group of orthologs #396. Best score 220 bits
Score difference with first non-orthologous sequence - P.pallidum:220 P.yoelii:168

D3B210              	100.00%		Q7RPW7              	100.00%
Bootstrap support for D3B210 as seed ortholog is 100%.
Bootstrap support for Q7RPW7 as seed ortholog is 100%.

Group of orthologs #397. Best score 220 bits
Score difference with first non-orthologous sequence - P.pallidum:220 P.yoelii:220

D3BIF4              	100.00%		Q7RH54              	100.00%
Bootstrap support for D3BIF4 as seed ortholog is 100%.
Bootstrap support for Q7RH54 as seed ortholog is 100%.

Group of orthologs #398. Best score 219 bits
Score difference with first non-orthologous sequence - P.pallidum:169 P.yoelii:219

D3AVJ4              	100.00%		Q7RR40              	100.00%
D3BTH8              	25.11%		
Bootstrap support for D3AVJ4 as seed ortholog is 100%.
Bootstrap support for Q7RR40 as seed ortholog is 100%.

Group of orthologs #399. Best score 218 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:112

D3B8N7              	100.00%		Q7RMR9              	100.00%
D3B6H5              	7.46%		
Bootstrap support for D3B8N7 as seed ortholog is 95%.
Bootstrap support for Q7RMR9 as seed ortholog is 99%.

Group of orthologs #400. Best score 218 bits
Score difference with first non-orthologous sequence - P.pallidum:218 P.yoelii:218

D3BDR3              	100.00%		Q7RPT5              	100.00%
D3BME1              	15.51%		
Bootstrap support for D3BDR3 as seed ortholog is 100%.
Bootstrap support for Q7RPT5 as seed ortholog is 100%.

Group of orthologs #401. Best score 218 bits
Score difference with first non-orthologous sequence - P.pallidum:137 P.yoelii:109

D3BPL3              	100.00%		Q7RRT0              	100.00%
D3BP03              	52.17%		
Bootstrap support for D3BPL3 as seed ortholog is 99%.
Bootstrap support for Q7RRT0 as seed ortholog is 98%.

Group of orthologs #402. Best score 218 bits
Score difference with first non-orthologous sequence - P.pallidum:218 P.yoelii:218

D3BK65              	100.00%		Q7RDN7              	100.00%
Bootstrap support for D3BK65 as seed ortholog is 100%.
Bootstrap support for Q7RDN7 as seed ortholog is 100%.

Group of orthologs #403. Best score 218 bits
Score difference with first non-orthologous sequence - P.pallidum:140 P.yoelii:131

D3BR13              	100.00%		Q7R874              	100.00%
Bootstrap support for D3BR13 as seed ortholog is 96%.
Bootstrap support for Q7R874 as seed ortholog is 99%.

Group of orthologs #404. Best score 218 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:218

D3BJX9              	100.00%		Q7RQA0              	100.00%
Bootstrap support for D3BJX9 as seed ortholog is 100%.
Bootstrap support for Q7RQA0 as seed ortholog is 100%.

Group of orthologs #405. Best score 217 bits
Score difference with first non-orthologous sequence - P.pallidum:39 P.yoelii:217

D3BFK6              	100.00%		Q7RDI7              	100.00%
Bootstrap support for D3BFK6 as seed ortholog is 93%.
Bootstrap support for Q7RDI7 as seed ortholog is 100%.

Group of orthologs #406. Best score 217 bits
Score difference with first non-orthologous sequence - P.pallidum:141 P.yoelii:141

D3BHC9              	100.00%		Q7RST6              	100.00%
Bootstrap support for D3BHC9 as seed ortholog is 100%.
Bootstrap support for Q7RST6 as seed ortholog is 100%.

Group of orthologs #407. Best score 216 bits
Score difference with first non-orthologous sequence - P.pallidum:216 P.yoelii:73

D3B280              	100.00%		Q7RR82              	100.00%
D3BV53              	16.67%		
Bootstrap support for D3B280 as seed ortholog is 100%.
Bootstrap support for Q7RR82 as seed ortholog is 99%.

Group of orthologs #408. Best score 216 bits
Score difference with first non-orthologous sequence - P.pallidum:216 P.yoelii:216

D3B8S5              	100.00%		Q7RKU2              	100.00%
Bootstrap support for D3B8S5 as seed ortholog is 100%.
Bootstrap support for Q7RKU2 as seed ortholog is 100%.

Group of orthologs #409. Best score 216 bits
Score difference with first non-orthologous sequence - P.pallidum:216 P.yoelii:216

D3BM72              	100.00%		Q7R7Y2              	100.00%
Bootstrap support for D3BM72 as seed ortholog is 100%.
Bootstrap support for Q7R7Y2 as seed ortholog is 100%.

Group of orthologs #410. Best score 216 bits
Score difference with first non-orthologous sequence - P.pallidum:216 P.yoelii:216

D3BMH8              	100.00%		Q7RMI9              	100.00%
Bootstrap support for D3BMH8 as seed ortholog is 100%.
Bootstrap support for Q7RMI9 as seed ortholog is 100%.

Group of orthologs #411. Best score 216 bits
Score difference with first non-orthologous sequence - P.pallidum:216 P.yoelii:216

D3BTH5              	100.00%		Q7RHW2              	100.00%
Bootstrap support for D3BTH5 as seed ortholog is 100%.
Bootstrap support for Q7RHW2 as seed ortholog is 100%.

Group of orthologs #412. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:215 P.yoelii:215

D3AXK7              	100.00%		Q7R9E1              	100.00%
Bootstrap support for D3AXK7 as seed ortholog is 100%.
Bootstrap support for Q7R9E1 as seed ortholog is 100%.

Group of orthologs #413. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:215 P.yoelii:215

D3B6P0              	100.00%		Q7RH06              	100.00%
Bootstrap support for D3B6P0 as seed ortholog is 100%.
Bootstrap support for Q7RH06 as seed ortholog is 100%.

Group of orthologs #414. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:215

D3B130              	100.00%		Q7RQ47              	100.00%
Bootstrap support for D3B130 as seed ortholog is 95%.
Bootstrap support for Q7RQ47 as seed ortholog is 100%.

Group of orthologs #415. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:215 P.yoelii:215

D3BCN3              	100.00%		Q7RGC5              	100.00%
Bootstrap support for D3BCN3 as seed ortholog is 100%.
Bootstrap support for Q7RGC5 as seed ortholog is 100%.

Group of orthologs #416. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:165 P.yoelii:125

D3B5L4              	100.00%		Q7RRZ5              	100.00%
Bootstrap support for D3B5L4 as seed ortholog is 100%.
Bootstrap support for Q7RRZ5 as seed ortholog is 99%.

Group of orthologs #417. Best score 215 bits
Score difference with first non-orthologous sequence - P.pallidum:215 P.yoelii:215

D3BV90              	100.00%		Q7RCM4              	100.00%
Bootstrap support for D3BV90 as seed ortholog is 100%.
Bootstrap support for Q7RCM4 as seed ortholog is 100%.

Group of orthologs #418. Best score 214 bits
Score difference with first non-orthologous sequence - P.pallidum:214 P.yoelii:214

D3B3A4              	100.00%		Q7RN53              	100.00%
Bootstrap support for D3B3A4 as seed ortholog is 100%.
Bootstrap support for Q7RN53 as seed ortholog is 100%.

Group of orthologs #419. Best score 214 bits
Score difference with first non-orthologous sequence - P.pallidum:214 P.yoelii:214

D3BK06              	100.00%		Q7RSC7              	100.00%
Bootstrap support for D3BK06 as seed ortholog is 100%.
Bootstrap support for Q7RSC7 as seed ortholog is 100%.

Group of orthologs #420. Best score 213 bits
Score difference with first non-orthologous sequence - P.pallidum:3 P.yoelii:94

D3B633              	100.00%		Q7REJ1              	100.00%
D3B6K9              	44.00%		Q7RS69              	78.43%
Bootstrap support for D3B633 as seed ortholog is 59%.
Alternative seed ortholog is D3BUT3 (3 bits away from this cluster)
Bootstrap support for Q7REJ1 as seed ortholog is 100%.

Group of orthologs #421. Best score 213 bits
Score difference with first non-orthologous sequence - P.pallidum:213 P.yoelii:213

D3BT09              	100.00%		Q7R9G1              	100.00%
Bootstrap support for D3BT09 as seed ortholog is 100%.
Bootstrap support for Q7R9G1 as seed ortholog is 100%.

Group of orthologs #422. Best score 212 bits
Score difference with first non-orthologous sequence - P.pallidum:212 P.yoelii:212

D3AY50              	100.00%		Q7REJ8              	100.00%
Bootstrap support for D3AY50 as seed ortholog is 100%.
Bootstrap support for Q7REJ8 as seed ortholog is 100%.

Group of orthologs #423. Best score 212 bits
Score difference with first non-orthologous sequence - P.pallidum:212 P.yoelii:212

D3B206              	100.00%		Q7RT02              	100.00%
Bootstrap support for D3B206 as seed ortholog is 100%.
Bootstrap support for Q7RT02 as seed ortholog is 100%.

Group of orthologs #424. Best score 211 bits
Score difference with first non-orthologous sequence - P.pallidum:95 P.yoelii:90

D3BDQ8              	100.00%		Q7RQW8              	100.00%
D3B313              	10.75%		
D3B143              	6.59%		
D3BBQ6              	5.11%		
Bootstrap support for D3BDQ8 as seed ortholog is 97%.
Bootstrap support for Q7RQW8 as seed ortholog is 99%.

Group of orthologs #425. Best score 211 bits
Score difference with first non-orthologous sequence - P.pallidum:145 P.yoelii:145

D3AVM8              	100.00%		Q7RKU8              	100.00%
Bootstrap support for D3AVM8 as seed ortholog is 99%.
Bootstrap support for Q7RKU8 as seed ortholog is 99%.

Group of orthologs #426. Best score 211 bits
Score difference with first non-orthologous sequence - P.pallidum:211 P.yoelii:211

D3B454              	100.00%		Q7RG90              	100.00%
Bootstrap support for D3B454 as seed ortholog is 100%.
Bootstrap support for Q7RG90 as seed ortholog is 100%.

Group of orthologs #427. Best score 211 bits
Score difference with first non-orthologous sequence - P.pallidum:55 P.yoelii:211

D3B1H3              	100.00%		Q7RPU4              	100.00%
Bootstrap support for D3B1H3 as seed ortholog is 90%.
Bootstrap support for Q7RPU4 as seed ortholog is 100%.

Group of orthologs #428. Best score 210 bits
Score difference with first non-orthologous sequence - P.pallidum:105 P.yoelii:210

D3B528              	100.00%		Q7RE87              	100.00%
Bootstrap support for D3B528 as seed ortholog is 99%.
Bootstrap support for Q7RE87 as seed ortholog is 100%.

Group of orthologs #429. Best score 210 bits
Score difference with first non-orthologous sequence - P.pallidum:210 P.yoelii:210

D3BEH6              	100.00%		Q7RM92              	100.00%
Bootstrap support for D3BEH6 as seed ortholog is 100%.
Bootstrap support for Q7RM92 as seed ortholog is 100%.

Group of orthologs #430. Best score 210 bits
Score difference with first non-orthologous sequence - P.pallidum:210 P.yoelii:210

D3BN75              	100.00%		Q7RDY8              	100.00%
Bootstrap support for D3BN75 as seed ortholog is 100%.
Bootstrap support for Q7RDY8 as seed ortholog is 100%.

Group of orthologs #431. Best score 210 bits
Score difference with first non-orthologous sequence - P.pallidum:210 P.yoelii:210

D3BHV4              	100.00%		Q7RPC8              	100.00%
Bootstrap support for D3BHV4 as seed ortholog is 100%.
Bootstrap support for Q7RPC8 as seed ortholog is 100%.

Group of orthologs #432. Best score 209 bits
Score difference with first non-orthologous sequence - P.pallidum:160 P.yoelii:164

D3AZ74              	100.00%		Q7RI55              	100.00%
                    	       		Q7RP85              	65.80%
Bootstrap support for D3AZ74 as seed ortholog is 99%.
Bootstrap support for Q7RI55 as seed ortholog is 99%.

Group of orthologs #433. Best score 209 bits
Score difference with first non-orthologous sequence - P.pallidum:209 P.yoelii:209

D3BQ33              	100.00%		Q7RCV0              	100.00%
Bootstrap support for D3BQ33 as seed ortholog is 100%.
Bootstrap support for Q7RCV0 as seed ortholog is 100%.

Group of orthologs #434. Best score 208 bits
Score difference with first non-orthologous sequence - P.pallidum:208 P.yoelii:34

D3BCH5              	100.00%		Q7R908              	100.00%
Bootstrap support for D3BCH5 as seed ortholog is 100%.
Bootstrap support for Q7R908 as seed ortholog is 85%.

Group of orthologs #435. Best score 208 bits
Score difference with first non-orthologous sequence - P.pallidum:208 P.yoelii:208

D3AYN6              	100.00%		Q7RP40              	100.00%
Bootstrap support for D3AYN6 as seed ortholog is 100%.
Bootstrap support for Q7RP40 as seed ortholog is 100%.

Group of orthologs #436. Best score 208 bits
Score difference with first non-orthologous sequence - P.pallidum:208 P.yoelii:208

D3BHT0              	100.00%		Q7RET6              	100.00%
Bootstrap support for D3BHT0 as seed ortholog is 100%.
Bootstrap support for Q7RET6 as seed ortholog is 100%.

Group of orthologs #437. Best score 208 bits
Score difference with first non-orthologous sequence - P.pallidum:208 P.yoelii:208

D3BVI7              	100.00%		Q7RCD0              	100.00%
Bootstrap support for D3BVI7 as seed ortholog is 100%.
Bootstrap support for Q7RCD0 as seed ortholog is 100%.

Group of orthologs #438. Best score 207 bits
Score difference with first non-orthologous sequence - P.pallidum:70 P.yoelii:90

D3BUT4              	100.00%		Q7RHI2              	100.00%
Bootstrap support for D3BUT4 as seed ortholog is 99%.
Bootstrap support for Q7RHI2 as seed ortholog is 99%.

Group of orthologs #439. Best score 207 bits
Score difference with first non-orthologous sequence - P.pallidum:207 P.yoelii:207

D3BTM5              	100.00%		Q7RS92              	100.00%
Bootstrap support for D3BTM5 as seed ortholog is 100%.
Bootstrap support for Q7RS92 as seed ortholog is 100%.

Group of orthologs #440. Best score 206 bits
Score difference with first non-orthologous sequence - P.pallidum:206 P.yoelii:206

D3BNC9              	100.00%		Q7RIQ5              	100.00%
Bootstrap support for D3BNC9 as seed ortholog is 100%.
Bootstrap support for Q7RIQ5 as seed ortholog is 100%.

Group of orthologs #441. Best score 206 bits
Score difference with first non-orthologous sequence - P.pallidum:206 P.yoelii:206

D3BM03              	100.00%		Q7RS62              	100.00%
Bootstrap support for D3BM03 as seed ortholog is 100%.
Bootstrap support for Q7RS62 as seed ortholog is 100%.

Group of orthologs #442. Best score 205 bits
Score difference with first non-orthologous sequence - P.pallidum:205 P.yoelii:205

D3B1K3              	100.00%		Q7R7S0              	100.00%
Bootstrap support for D3B1K3 as seed ortholog is 100%.
Bootstrap support for Q7R7S0 as seed ortholog is 100%.

Group of orthologs #443. Best score 205 bits
Score difference with first non-orthologous sequence - P.pallidum:205 P.yoelii:205

D3B110              	100.00%		Q7RM16              	100.00%
Bootstrap support for D3B110 as seed ortholog is 100%.
Bootstrap support for Q7RM16 as seed ortholog is 100%.

Group of orthologs #444. Best score 205 bits
Score difference with first non-orthologous sequence - P.pallidum:37 P.yoelii:96

D3B5M6              	100.00%		Q7RIP4              	100.00%
Bootstrap support for D3B5M6 as seed ortholog is 73%.
Alternative seed ortholog is D3BRI1 (37 bits away from this cluster)
Bootstrap support for Q7RIP4 as seed ortholog is 82%.

Group of orthologs #445. Best score 205 bits
Score difference with first non-orthologous sequence - P.pallidum:205 P.yoelii:205

D3BFU2              	100.00%		Q7R8U9              	100.00%
Bootstrap support for D3BFU2 as seed ortholog is 100%.
Bootstrap support for Q7R8U9 as seed ortholog is 100%.

Group of orthologs #446. Best score 205 bits
Score difference with first non-orthologous sequence - P.pallidum:53 P.yoelii:63

D3BGH1              	100.00%		Q7RSH5              	100.00%
Bootstrap support for D3BGH1 as seed ortholog is 97%.
Bootstrap support for Q7RSH5 as seed ortholog is 99%.

Group of orthologs #447. Best score 205 bits
Score difference with first non-orthologous sequence - P.pallidum:205 P.yoelii:205

D3BRA7              	100.00%		Q7RMC7              	100.00%
Bootstrap support for D3BRA7 as seed ortholog is 100%.
Bootstrap support for Q7RMC7 as seed ortholog is 100%.

Group of orthologs #448. Best score 204 bits
Score difference with first non-orthologous sequence - P.pallidum:204 P.yoelii:204

D3BSQ9              	100.00%		Q7RJL3              	100.00%
Bootstrap support for D3BSQ9 as seed ortholog is 100%.
Bootstrap support for Q7RJL3 as seed ortholog is 100%.

Group of orthologs #449. Best score 204 bits
Score difference with first non-orthologous sequence - P.pallidum:204 P.yoelii:204

D3BP64              	100.00%		Q7RQW7              	100.00%
Bootstrap support for D3BP64 as seed ortholog is 100%.
Bootstrap support for Q7RQW7 as seed ortholog is 100%.

Group of orthologs #450. Best score 202 bits
Score difference with first non-orthologous sequence - P.pallidum:93 P.yoelii:41

D3BLH2              	100.00%		Q7RIS3              	100.00%
Bootstrap support for D3BLH2 as seed ortholog is 99%.
Bootstrap support for Q7RIS3 as seed ortholog is 93%.

Group of orthologs #451. Best score 200 bits
Score difference with first non-orthologous sequence - P.pallidum:126 P.yoelii:200

D3B5T9              	100.00%		Q7R9D9              	100.00%
Bootstrap support for D3B5T9 as seed ortholog is 100%.
Bootstrap support for Q7R9D9 as seed ortholog is 100%.

Group of orthologs #452. Best score 200 bits
Score difference with first non-orthologous sequence - P.pallidum:200 P.yoelii:200

D3B0J0              	100.00%		Q7RKQ5              	100.00%
Bootstrap support for D3B0J0 as seed ortholog is 100%.
Bootstrap support for Q7RKQ5 as seed ortholog is 100%.

Group of orthologs #453. Best score 200 bits
Score difference with first non-orthologous sequence - P.pallidum:200 P.yoelii:200

D3BFQ0              	100.00%		Q7RAV2              	100.00%
Bootstrap support for D3BFQ0 as seed ortholog is 100%.
Bootstrap support for Q7RAV2 as seed ortholog is 100%.

Group of orthologs #454. Best score 200 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:94

D3BAL5              	100.00%		Q7RJT3              	100.00%
Bootstrap support for D3BAL5 as seed ortholog is 99%.
Bootstrap support for Q7RJT3 as seed ortholog is 99%.

Group of orthologs #455. Best score 200 bits
Score difference with first non-orthologous sequence - P.pallidum:200 P.yoelii:200

D3BCA4              	100.00%		Q7RK18              	100.00%
Bootstrap support for D3BCA4 as seed ortholog is 100%.
Bootstrap support for Q7RK18 as seed ortholog is 100%.

Group of orthologs #456. Best score 200 bits
Score difference with first non-orthologous sequence - P.pallidum:37 P.yoelii:200

D3BQK6              	100.00%		Q7RP88              	100.00%
Bootstrap support for D3BQK6 as seed ortholog is 82%.
Bootstrap support for Q7RP88 as seed ortholog is 100%.

Group of orthologs #457. Best score 199 bits
Score difference with first non-orthologous sequence - P.pallidum:199 P.yoelii:199

D3AY53              	100.00%		Q7RFG0              	100.00%
Bootstrap support for D3AY53 as seed ortholog is 100%.
Bootstrap support for Q7RFG0 as seed ortholog is 100%.

Group of orthologs #458. Best score 198 bits
Score difference with first non-orthologous sequence - P.pallidum:22 P.yoelii:59

D3BNT3              	100.00%		Q7RBR0              	100.00%
Bootstrap support for D3BNT3 as seed ortholog is 77%.
Bootstrap support for Q7RBR0 as seed ortholog is 98%.

Group of orthologs #459. Best score 198 bits
Score difference with first non-orthologous sequence - P.pallidum:198 P.yoelii:198

D3BV19              	100.00%		Q7RAN9              	100.00%
Bootstrap support for D3BV19 as seed ortholog is 100%.
Bootstrap support for Q7RAN9 as seed ortholog is 100%.

Group of orthologs #460. Best score 198 bits
Score difference with first non-orthologous sequence - P.pallidum:198 P.yoelii:198

D3BTU3              	100.00%		Q7RJ88              	100.00%
Bootstrap support for D3BTU3 as seed ortholog is 100%.
Bootstrap support for Q7RJ88 as seed ortholog is 100%.

Group of orthologs #461. Best score 197 bits
Score difference with first non-orthologous sequence - P.pallidum:93 P.yoelii:197

D3BCX1              	100.00%		Q7PDS7              	100.00%
D3BJJ1              	30.17%		
Bootstrap support for D3BCX1 as seed ortholog is 98%.
Bootstrap support for Q7PDS7 as seed ortholog is 100%.

Group of orthologs #462. Best score 197 bits
Score difference with first non-orthologous sequence - P.pallidum:197 P.yoelii:47

D3B755              	100.00%		Q7RLW2              	100.00%
Bootstrap support for D3B755 as seed ortholog is 100%.
Bootstrap support for Q7RLW2 as seed ortholog is 52%.
Alternative seed ortholog is Q7RR57 (47 bits away from this cluster)

Group of orthologs #463. Best score 197 bits
Score difference with first non-orthologous sequence - P.pallidum:197 P.yoelii:197

D3BAC1              	100.00%		Q7RKP2              	100.00%
Bootstrap support for D3BAC1 as seed ortholog is 100%.
Bootstrap support for Q7RKP2 as seed ortholog is 100%.

Group of orthologs #464. Best score 196 bits
Score difference with first non-orthologous sequence - P.pallidum:196 P.yoelii:196

D3B913              	100.00%		Q7RIX7              	100.00%
Bootstrap support for D3B913 as seed ortholog is 100%.
Bootstrap support for Q7RIX7 as seed ortholog is 100%.

Group of orthologs #465. Best score 196 bits
Score difference with first non-orthologous sequence - P.pallidum:196 P.yoelii:196

D3BVG5              	100.00%		Q7PDM2              	100.00%
Bootstrap support for D3BVG5 as seed ortholog is 100%.
Bootstrap support for Q7PDM2 as seed ortholog is 100%.

Group of orthologs #466. Best score 196 bits
Score difference with first non-orthologous sequence - P.pallidum:196 P.yoelii:196

D3BPW6              	100.00%		Q7RGK2              	100.00%
Bootstrap support for D3BPW6 as seed ortholog is 100%.
Bootstrap support for Q7RGK2 as seed ortholog is 100%.

Group of orthologs #467. Best score 195 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:80

D3BKW3              	100.00%		Q7RGT1              	100.00%
Bootstrap support for D3BKW3 as seed ortholog is 85%.
Bootstrap support for Q7RGT1 as seed ortholog is 95%.

Group of orthologs #468. Best score 193 bits
Score difference with first non-orthologous sequence - P.pallidum:193 P.yoelii:193

D3AXB8              	100.00%		Q7RBZ2              	100.00%
Bootstrap support for D3AXB8 as seed ortholog is 100%.
Bootstrap support for Q7RBZ2 as seed ortholog is 100%.

Group of orthologs #469. Best score 193 bits
Score difference with first non-orthologous sequence - P.pallidum:193 P.yoelii:193

D3BN73              	100.00%		Q7RLL3              	100.00%
Bootstrap support for D3BN73 as seed ortholog is 100%.
Bootstrap support for Q7RLL3 as seed ortholog is 100%.

Group of orthologs #470. Best score 192 bits
Score difference with first non-orthologous sequence - P.pallidum:150 P.yoelii:192

D3BKA7              	100.00%		Q7RJ45              	100.00%
D3BQB9              	19.74%		
D3BIU0              	12.34%		
Bootstrap support for D3BKA7 as seed ortholog is 99%.
Bootstrap support for Q7RJ45 as seed ortholog is 100%.

Group of orthologs #471. Best score 192 bits
Score difference with first non-orthologous sequence - P.pallidum:192 P.yoelii:192

D3B5I1              	100.00%		Q7RGZ6              	100.00%
Bootstrap support for D3B5I1 as seed ortholog is 100%.
Bootstrap support for Q7RGZ6 as seed ortholog is 100%.

Group of orthologs #472. Best score 192 bits
Score difference with first non-orthologous sequence - P.pallidum:192 P.yoelii:192

D3BCJ5              	100.00%		Q7REF0              	100.00%
Bootstrap support for D3BCJ5 as seed ortholog is 100%.
Bootstrap support for Q7REF0 as seed ortholog is 100%.

Group of orthologs #473. Best score 192 bits
Score difference with first non-orthologous sequence - P.pallidum:62 P.yoelii:68

D3BH42              	100.00%		Q7RRM6              	100.00%
Bootstrap support for D3BH42 as seed ortholog is 98%.
Bootstrap support for Q7RRM6 as seed ortholog is 98%.

Group of orthologs #474. Best score 191 bits
Score difference with first non-orthologous sequence - P.pallidum:191 P.yoelii:191

D3AW89              	100.00%		Q7RA12              	100.00%
Bootstrap support for D3AW89 as seed ortholog is 100%.
Bootstrap support for Q7RA12 as seed ortholog is 100%.

Group of orthologs #475. Best score 191 bits
Score difference with first non-orthologous sequence - P.pallidum:14 P.yoelii:191

D3B2S7              	100.00%		Q7RSV8              	100.00%
Bootstrap support for D3B2S7 as seed ortholog is 63%.
Alternative seed ortholog is D3B7E4 (14 bits away from this cluster)
Bootstrap support for Q7RSV8 as seed ortholog is 100%.

Group of orthologs #476. Best score 191 bits
Score difference with first non-orthologous sequence - P.pallidum:191 P.yoelii:191

D3BGC0              	100.00%		Q7RG05              	100.00%
Bootstrap support for D3BGC0 as seed ortholog is 100%.
Bootstrap support for Q7RG05 as seed ortholog is 100%.

Group of orthologs #477. Best score 190 bits
Score difference with first non-orthologous sequence - P.pallidum:190 P.yoelii:190

D3BG85              	100.00%		Q7RI58              	100.00%
Bootstrap support for D3BG85 as seed ortholog is 100%.
Bootstrap support for Q7RI58 as seed ortholog is 100%.

Group of orthologs #478. Best score 190 bits
Score difference with first non-orthologous sequence - P.pallidum:190 P.yoelii:190

D3BKU3              	100.00%		Q7RLX1              	100.00%
Bootstrap support for D3BKU3 as seed ortholog is 100%.
Bootstrap support for Q7RLX1 as seed ortholog is 100%.

Group of orthologs #479. Best score 190 bits
Score difference with first non-orthologous sequence - P.pallidum:190 P.yoelii:190

D3BK61              	100.00%		Q7RNY1              	100.00%
Bootstrap support for D3BK61 as seed ortholog is 100%.
Bootstrap support for Q7RNY1 as seed ortholog is 100%.

Group of orthologs #480. Best score 190 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:116

D3BU31              	100.00%		Q7RJI8              	100.00%
Bootstrap support for D3BU31 as seed ortholog is 99%.
Bootstrap support for Q7RJI8 as seed ortholog is 100%.

Group of orthologs #481. Best score 189 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:145

D3BT42              	100.00%		Q7RRX2              	100.00%
D3BT43              	86.45%		
Bootstrap support for D3BT42 as seed ortholog is 99%.
Bootstrap support for Q7RRX2 as seed ortholog is 100%.

Group of orthologs #482. Best score 189 bits
Score difference with first non-orthologous sequence - P.pallidum:189 P.yoelii:189

D3B3C0              	100.00%		Q7RLR3              	100.00%
Bootstrap support for D3B3C0 as seed ortholog is 100%.
Bootstrap support for Q7RLR3 as seed ortholog is 100%.

Group of orthologs #483. Best score 188 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:49

D3BQC1              	100.00%		Q7RHH4              	100.00%
D3BI36              	11.54%		
D3BE24              	10.05%		
D3B9V6              	6.56%		
D3BUS9              	6.03%		
D3BVR3              	5.51%		
Bootstrap support for D3BQC1 as seed ortholog is 98%.
Bootstrap support for Q7RHH4 as seed ortholog is 82%.

Group of orthologs #484. Best score 188 bits
Score difference with first non-orthologous sequence - P.pallidum:10 P.yoelii:36

D3BN50              	100.00%		Q7RJG2              	100.00%
                    	       		Q7RAH3              	35.47%
Bootstrap support for D3BN50 as seed ortholog is 63%.
Alternative seed ortholog is D3B5B2 (10 bits away from this cluster)
Bootstrap support for Q7RJG2 as seed ortholog is 84%.

Group of orthologs #485. Best score 188 bits
Score difference with first non-orthologous sequence - P.pallidum:188 P.yoelii:188

D3B4A0              	100.00%		Q7R853              	100.00%
Bootstrap support for D3B4A0 as seed ortholog is 100%.
Bootstrap support for Q7R853 as seed ortholog is 100%.

Group of orthologs #486. Best score 188 bits
Score difference with first non-orthologous sequence - P.pallidum:118 P.yoelii:188

D3B9R2              	100.00%		Q7PDP9              	100.00%
Bootstrap support for D3B9R2 as seed ortholog is 99%.
Bootstrap support for Q7PDP9 as seed ortholog is 100%.

Group of orthologs #487. Best score 188 bits
Score difference with first non-orthologous sequence - P.pallidum:188 P.yoelii:188

D3BGB9              	100.00%		Q7RAI1              	100.00%
Bootstrap support for D3BGB9 as seed ortholog is 100%.
Bootstrap support for Q7RAI1 as seed ortholog is 100%.

Group of orthologs #488. Best score 187 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:104

D3BAG5              	100.00%		Q7RS94              	100.00%
Bootstrap support for D3BAG5 as seed ortholog is 100%.
Bootstrap support for Q7RS94 as seed ortholog is 99%.

Group of orthologs #489. Best score 186 bits
Score difference with first non-orthologous sequence - P.pallidum:110 P.yoelii:44

D3B9R3              	100.00%		Q7R9G3              	100.00%
Bootstrap support for D3B9R3 as seed ortholog is 99%.
Bootstrap support for Q7R9G3 as seed ortholog is 84%.

Group of orthologs #490. Best score 186 bits
Score difference with first non-orthologous sequence - P.pallidum:186 P.yoelii:63

D3BSY5              	100.00%		Q7RNQ7              	100.00%
Bootstrap support for D3BSY5 as seed ortholog is 100%.
Bootstrap support for Q7RNQ7 as seed ortholog is 97%.

Group of orthologs #491. Best score 185 bits
Score difference with first non-orthologous sequence - P.pallidum:39 P.yoelii:77

D3BAW0              	100.00%		Q7RGI6              	100.00%
Bootstrap support for D3BAW0 as seed ortholog is 99%.
Bootstrap support for Q7RGI6 as seed ortholog is 99%.

Group of orthologs #492. Best score 185 bits
Score difference with first non-orthologous sequence - P.pallidum:104 P.yoelii:185

D3B6L9              	100.00%		Q7RPA1              	100.00%
Bootstrap support for D3B6L9 as seed ortholog is 100%.
Bootstrap support for Q7RPA1 as seed ortholog is 100%.

Group of orthologs #493. Best score 185 bits
Score difference with first non-orthologous sequence - P.pallidum:64 P.yoelii:36

D3BGI7              	100.00%		Q7RK78              	100.00%
Bootstrap support for D3BGI7 as seed ortholog is 99%.
Bootstrap support for Q7RK78 as seed ortholog is 95%.

Group of orthologs #494. Best score 185 bits
Score difference with first non-orthologous sequence - P.pallidum:185 P.yoelii:185

D3BD97              	100.00%		Q7RP23              	100.00%
Bootstrap support for D3BD97 as seed ortholog is 100%.
Bootstrap support for Q7RP23 as seed ortholog is 100%.

Group of orthologs #495. Best score 184 bits
Score difference with first non-orthologous sequence - P.pallidum:93 P.yoelii:114

D3BIA4              	100.00%		Q7PDN8              	100.00%
Bootstrap support for D3BIA4 as seed ortholog is 99%.
Bootstrap support for Q7PDN8 as seed ortholog is 100%.

Group of orthologs #496. Best score 184 bits
Score difference with first non-orthologous sequence - P.pallidum:73 P.yoelii:20

D3B839              	100.00%		Q7RJ10              	100.00%
Bootstrap support for D3B839 as seed ortholog is 99%.
Bootstrap support for Q7RJ10 as seed ortholog is 70%.
Alternative seed ortholog is Q7RD12 (20 bits away from this cluster)

Group of orthologs #497. Best score 184 bits
Score difference with first non-orthologous sequence - P.pallidum:184 P.yoelii:184

D3BBQ0              	100.00%		Q7RHQ5              	100.00%
Bootstrap support for D3BBQ0 as seed ortholog is 100%.
Bootstrap support for Q7RHQ5 as seed ortholog is 100%.

Group of orthologs #498. Best score 183 bits
Score difference with first non-orthologous sequence - P.pallidum:68 P.yoelii:97

D3B2M5              	100.00%		Q7RGI0              	100.00%
Bootstrap support for D3B2M5 as seed ortholog is 99%.
Bootstrap support for Q7RGI0 as seed ortholog is 99%.

Group of orthologs #499. Best score 182 bits
Score difference with first non-orthologous sequence - P.pallidum:69 P.yoelii:100

D3B3C8              	100.00%		Q7RLE7              	100.00%
Bootstrap support for D3B3C8 as seed ortholog is 100%.
Bootstrap support for Q7RLE7 as seed ortholog is 99%.

Group of orthologs #500. Best score 180 bits
Score difference with first non-orthologous sequence - P.pallidum:46 P.yoelii:70

D3B103              	100.00%		Q7RGZ8              	100.00%
Bootstrap support for D3B103 as seed ortholog is 86%.
Bootstrap support for Q7RGZ8 as seed ortholog is 90%.

Group of orthologs #501. Best score 180 bits
Score difference with first non-orthologous sequence - P.pallidum:180 P.yoelii:180

D3BAC6              	100.00%		Q7RRQ1              	100.00%
Bootstrap support for D3BAC6 as seed ortholog is 100%.
Bootstrap support for Q7RRQ1 as seed ortholog is 100%.

Group of orthologs #502. Best score 180 bits
Score difference with first non-orthologous sequence - P.pallidum:108 P.yoelii:180

D3BM07              	100.00%		Q7RMG0              	100.00%
Bootstrap support for D3BM07 as seed ortholog is 99%.
Bootstrap support for Q7RMG0 as seed ortholog is 100%.

Group of orthologs #503. Best score 180 bits
Score difference with first non-orthologous sequence - P.pallidum:180 P.yoelii:180

D3BQJ7              	100.00%		Q7RT75              	100.00%
Bootstrap support for D3BQJ7 as seed ortholog is 100%.
Bootstrap support for Q7RT75 as seed ortholog is 100%.

Group of orthologs #504. Best score 179 bits
Score difference with first non-orthologous sequence - P.pallidum:179 P.yoelii:179

D3BL07              	100.00%		Q7RIN6              	100.00%
D3B3C1              	10.65%		
Bootstrap support for D3BL07 as seed ortholog is 100%.
Bootstrap support for Q7RIN6 as seed ortholog is 100%.

Group of orthologs #505. Best score 179 bits
Score difference with first non-orthologous sequence - P.pallidum:105 P.yoelii:179

D3BA80              	100.00%		Q7RC93              	100.00%
Bootstrap support for D3BA80 as seed ortholog is 99%.
Bootstrap support for Q7RC93 as seed ortholog is 100%.

Group of orthologs #506. Best score 179 bits
Score difference with first non-orthologous sequence - P.pallidum:179 P.yoelii:179

D3BBM0              	100.00%		Q7RS39              	100.00%
Bootstrap support for D3BBM0 as seed ortholog is 100%.
Bootstrap support for Q7RS39 as seed ortholog is 100%.

Group of orthologs #507. Best score 178 bits
Score difference with first non-orthologous sequence - P.pallidum:178 P.yoelii:98

D3B782              	100.00%		Q7RGP0              	100.00%
D3AX99              	64.44%		
Bootstrap support for D3B782 as seed ortholog is 100%.
Bootstrap support for Q7RGP0 as seed ortholog is 99%.

Group of orthologs #508. Best score 178 bits
Score difference with first non-orthologous sequence - P.pallidum:178 P.yoelii:178

D3BHJ3              	100.00%		Q7RAN5              	100.00%
Bootstrap support for D3BHJ3 as seed ortholog is 100%.
Bootstrap support for Q7RAN5 as seed ortholog is 100%.

Group of orthologs #509. Best score 178 bits
Score difference with first non-orthologous sequence - P.pallidum:178 P.yoelii:178

D3BBP3              	100.00%		Q7RPR6              	100.00%
Bootstrap support for D3BBP3 as seed ortholog is 100%.
Bootstrap support for Q7RPR6 as seed ortholog is 100%.

Group of orthologs #510. Best score 177 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:177

D3AZ84              	100.00%		Q7RS61              	100.00%
D3BV70              	11.41%		
Bootstrap support for D3AZ84 as seed ortholog is 97%.
Bootstrap support for Q7RS61 as seed ortholog is 100%.

Group of orthologs #511. Best score 177 bits
Score difference with first non-orthologous sequence - P.pallidum:177 P.yoelii:177

D3B6S6              	100.00%		Q7RDE2              	100.00%
Bootstrap support for D3B6S6 as seed ortholog is 100%.
Bootstrap support for Q7RDE2 as seed ortholog is 100%.

Group of orthologs #512. Best score 177 bits
Score difference with first non-orthologous sequence - P.pallidum:177 P.yoelii:177

D3BRB4              	100.00%		Q7RGH3              	100.00%
Bootstrap support for D3BRB4 as seed ortholog is 100%.
Bootstrap support for Q7RGH3 as seed ortholog is 100%.

Group of orthologs #513. Best score 177 bits
Score difference with first non-orthologous sequence - P.pallidum:27 P.yoelii:177

D3BU73              	100.00%		Q7RE52              	100.00%
Bootstrap support for D3BU73 as seed ortholog is 92%.
Bootstrap support for Q7RE52 as seed ortholog is 100%.

Group of orthologs #514. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:79

D3B4H6              	100.00%		Q7RIJ1              	100.00%
Bootstrap support for D3B4H6 as seed ortholog is 100%.
Bootstrap support for Q7RIJ1 as seed ortholog is 98%.

Group of orthologs #515. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:176

D3B5J6              	100.00%		Q7RPR5              	100.00%
Bootstrap support for D3B5J6 as seed ortholog is 100%.
Bootstrap support for Q7RPR5 as seed ortholog is 100%.

Group of orthologs #516. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:176

D3BLD1              	100.00%		Q7RFZ2              	100.00%
Bootstrap support for D3BLD1 as seed ortholog is 100%.
Bootstrap support for Q7RFZ2 as seed ortholog is 100%.

Group of orthologs #517. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:11

D3BTJ6              	100.00%		Q7RBE5              	100.00%
Bootstrap support for D3BTJ6 as seed ortholog is 100%.
Bootstrap support for Q7RBE5 as seed ortholog is 82%.

Group of orthologs #518. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:176

D3BBQ7              	100.00%		Q7RT71              	100.00%
Bootstrap support for D3BBQ7 as seed ortholog is 100%.
Bootstrap support for Q7RT71 as seed ortholog is 100%.

Group of orthologs #519. Best score 176 bits
Score difference with first non-orthologous sequence - P.pallidum:176 P.yoelii:176

D3BT31              	100.00%		Q7RH34              	100.00%
Bootstrap support for D3BT31 as seed ortholog is 100%.
Bootstrap support for Q7RH34 as seed ortholog is 100%.

Group of orthologs #520. Best score 175 bits
Score difference with first non-orthologous sequence - P.pallidum:175 P.yoelii:175

D3AXW3              	100.00%		Q7RLX3              	100.00%
Bootstrap support for D3AXW3 as seed ortholog is 100%.
Bootstrap support for Q7RLX3 as seed ortholog is 100%.

Group of orthologs #521. Best score 175 bits
Score difference with first non-orthologous sequence - P.pallidum:175 P.yoelii:175

D3BGW6              	100.00%		Q7RH16              	100.00%
Bootstrap support for D3BGW6 as seed ortholog is 100%.
Bootstrap support for Q7RH16 as seed ortholog is 100%.

Group of orthologs #522. Best score 174 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:78

D3BMB7              	100.00%		Q7RKL4              	100.00%
                    	       		Q7RG23              	62.53%
Bootstrap support for D3BMB7 as seed ortholog is 88%.
Bootstrap support for Q7RKL4 as seed ortholog is 96%.

Group of orthologs #523. Best score 174 bits
Score difference with first non-orthologous sequence - P.pallidum:174 P.yoelii:174

D3AW31              	100.00%		Q7R8B0              	100.00%
Bootstrap support for D3AW31 as seed ortholog is 100%.
Bootstrap support for Q7R8B0 as seed ortholog is 100%.

Group of orthologs #524. Best score 174 bits
Score difference with first non-orthologous sequence - P.pallidum:174 P.yoelii:174

D3BN51              	100.00%		Q7RNK9              	100.00%
Bootstrap support for D3BN51 as seed ortholog is 100%.
Bootstrap support for Q7RNK9 as seed ortholog is 100%.

Group of orthologs #525. Best score 174 bits
Score difference with first non-orthologous sequence - P.pallidum:174 P.yoelii:174

D3BKX3              	100.00%		Q7RR78              	100.00%
Bootstrap support for D3BKX3 as seed ortholog is 100%.
Bootstrap support for Q7RR78 as seed ortholog is 100%.

Group of orthologs #526. Best score 173 bits
Score difference with first non-orthologous sequence - P.pallidum:173 P.yoelii:173

D3B1Q0              	100.00%		Q7RKF4              	100.00%
Bootstrap support for D3B1Q0 as seed ortholog is 100%.
Bootstrap support for Q7RKF4 as seed ortholog is 100%.

Group of orthologs #527. Best score 173 bits
Score difference with first non-orthologous sequence - P.pallidum:21 P.yoelii:81

D3BUD6              	100.00%		Q7RHG1              	100.00%
Bootstrap support for D3BUD6 as seed ortholog is 99%.
Bootstrap support for Q7RHG1 as seed ortholog is 98%.

Group of orthologs #528. Best score 173 bits
Score difference with first non-orthologous sequence - P.pallidum:54 P.yoelii:91

D3BVD2              	100.00%		Q7RRG0              	100.00%
Bootstrap support for D3BVD2 as seed ortholog is 52%.
Alternative seed ortholog is D3BSM1 (54 bits away from this cluster)
Bootstrap support for Q7RRG0 as seed ortholog is 59%.
Alternative seed ortholog is Q7RC10 (91 bits away from this cluster)

Group of orthologs #529. Best score 173 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:173

D3BVF8              	100.00%		Q7RS99              	100.00%
Bootstrap support for D3BVF8 as seed ortholog is 99%.
Bootstrap support for Q7RS99 as seed ortholog is 100%.

Group of orthologs #530. Best score 172 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:59

D3B2W9              	100.00%		Q7RQC9              	100.00%
D3BL03              	21.00%		
D3BHJ6              	14.20%		
D3B027              	12.86%		
D3B6I7              	5.38%		
Bootstrap support for D3B2W9 as seed ortholog is 99%.
Bootstrap support for Q7RQC9 as seed ortholog is 96%.

Group of orthologs #531. Best score 172 bits
Score difference with first non-orthologous sequence - P.pallidum:172 P.yoelii:172

D3B0K6              	100.00%		Q7RA33              	100.00%
Bootstrap support for D3B0K6 as seed ortholog is 100%.
Bootstrap support for Q7RA33 as seed ortholog is 100%.

Group of orthologs #532. Best score 172 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:172

D3BL27              	100.00%		Q7RF00              	100.00%
Bootstrap support for D3BL27 as seed ortholog is 100%.
Bootstrap support for Q7RF00 as seed ortholog is 100%.

Group of orthologs #533. Best score 172 bits
Score difference with first non-orthologous sequence - P.pallidum:65 P.yoelii:172

D3BVN2              	100.00%		Q7RBG4              	100.00%
Bootstrap support for D3BVN2 as seed ortholog is 80%.
Bootstrap support for Q7RBG4 as seed ortholog is 100%.

Group of orthologs #534. Best score 171 bits
Score difference with first non-orthologous sequence - P.pallidum:46 P.yoelii:171

D3B1Z1              	100.00%		Q7RHE4              	100.00%
Bootstrap support for D3B1Z1 as seed ortholog is 89%.
Bootstrap support for Q7RHE4 as seed ortholog is 100%.

Group of orthologs #535. Best score 171 bits
Score difference with first non-orthologous sequence - P.pallidum:83 P.yoelii:71

D3AWL2              	100.00%		Q7RT99              	100.00%
Bootstrap support for D3AWL2 as seed ortholog is 85%.
Bootstrap support for Q7RT99 as seed ortholog is 74%.
Alternative seed ortholog is Q7R9I8 (71 bits away from this cluster)

Group of orthologs #536. Best score 171 bits
Score difference with first non-orthologous sequence - P.pallidum:85 P.yoelii:171

D3BEA8              	100.00%		Q7RD58              	100.00%
Bootstrap support for D3BEA8 as seed ortholog is 99%.
Bootstrap support for Q7RD58 as seed ortholog is 100%.

Group of orthologs #537. Best score 171 bits
Score difference with first non-orthologous sequence - P.pallidum:171 P.yoelii:171

D3B6N9              	100.00%		Q7RND3              	100.00%
Bootstrap support for D3B6N9 as seed ortholog is 100%.
Bootstrap support for Q7RND3 as seed ortholog is 100%.

Group of orthologs #538. Best score 171 bits
Score difference with first non-orthologous sequence - P.pallidum:171 P.yoelii:55

D3BQ45              	100.00%		Q7RFT7              	100.00%
Bootstrap support for D3BQ45 as seed ortholog is 100%.
Bootstrap support for Q7RFT7 as seed ortholog is 51%.
Alternative seed ortholog is Q7RFK1 (55 bits away from this cluster)

Group of orthologs #539. Best score 170 bits
Score difference with first non-orthologous sequence - P.pallidum:170 P.yoelii:170

D3B0W4              	100.00%		Q7R8N7              	100.00%
Bootstrap support for D3B0W4 as seed ortholog is 100%.
Bootstrap support for Q7R8N7 as seed ortholog is 100%.

Group of orthologs #540. Best score 170 bits
Score difference with first non-orthologous sequence - P.pallidum:170 P.yoelii:170

D3B972              	100.00%		Q7RPL2              	100.00%
Bootstrap support for D3B972 as seed ortholog is 100%.
Bootstrap support for Q7RPL2 as seed ortholog is 100%.

Group of orthologs #541. Best score 170 bits
Score difference with first non-orthologous sequence - P.pallidum:68 P.yoelii:47

D3BQS8              	100.00%		Q7RJU9              	100.00%
Bootstrap support for D3BQS8 as seed ortholog is 99%.
Bootstrap support for Q7RJU9 as seed ortholog is 99%.

Group of orthologs #542. Best score 169 bits
Score difference with first non-orthologous sequence - P.pallidum:169 P.yoelii:169

D3B1L8              	100.00%		Q7RL16              	100.00%
Bootstrap support for D3B1L8 as seed ortholog is 100%.
Bootstrap support for Q7RL16 as seed ortholog is 100%.

Group of orthologs #543. Best score 169 bits
Score difference with first non-orthologous sequence - P.pallidum:169 P.yoelii:169

D3B0K1              	100.00%		Q7RN85              	100.00%
Bootstrap support for D3B0K1 as seed ortholog is 100%.
Bootstrap support for Q7RN85 as seed ortholog is 100%.

Group of orthologs #544. Best score 169 bits
Score difference with first non-orthologous sequence - P.pallidum:169 P.yoelii:169

D3B3U0              	100.00%		Q7RKC2              	100.00%
Bootstrap support for D3B3U0 as seed ortholog is 100%.
Bootstrap support for Q7RKC2 as seed ortholog is 100%.

Group of orthologs #545. Best score 168 bits
Score difference with first non-orthologous sequence - P.pallidum:168 P.yoelii:168

D3B465              	100.00%		Q7RAR8              	100.00%
Bootstrap support for D3B465 as seed ortholog is 100%.
Bootstrap support for Q7RAR8 as seed ortholog is 100%.

Group of orthologs #546. Best score 168 bits
Score difference with first non-orthologous sequence - P.pallidum:168 P.yoelii:168

D3B3B2              	100.00%		Q7RQR5              	100.00%
Bootstrap support for D3B3B2 as seed ortholog is 100%.
Bootstrap support for Q7RQR5 as seed ortholog is 100%.

Group of orthologs #547. Best score 168 bits
Score difference with first non-orthologous sequence - P.pallidum:168 P.yoelii:168

D3BPP6              	100.00%		Q7RQV7              	100.00%
Bootstrap support for D3BPP6 as seed ortholog is 100%.
Bootstrap support for Q7RQV7 as seed ortholog is 100%.

Group of orthologs #548. Best score 168 bits
Score difference with first non-orthologous sequence - P.pallidum:168 P.yoelii:168

D3BN47              	100.00%		Q7RTF0              	100.00%
Bootstrap support for D3BN47 as seed ortholog is 100%.
Bootstrap support for Q7RTF0 as seed ortholog is 100%.

Group of orthologs #549. Best score 167 bits
Score difference with first non-orthologous sequence - P.pallidum:83 P.yoelii:99

D3BAF1              	100.00%		Q7R9Y3              	100.00%
Bootstrap support for D3BAF1 as seed ortholog is 99%.
Bootstrap support for Q7R9Y3 as seed ortholog is 99%.

Group of orthologs #550. Best score 167 bits
Score difference with first non-orthologous sequence - P.pallidum:41 P.yoelii:14

D3BBG2              	100.00%		Q7RQR3              	100.00%
Bootstrap support for D3BBG2 as seed ortholog is 97%.
Bootstrap support for Q7RQR3 as seed ortholog is 74%.
Alternative seed ortholog is Q7RRJ8 (14 bits away from this cluster)

Group of orthologs #551. Best score 166 bits
Score difference with first non-orthologous sequence - P.pallidum:166 P.yoelii:166

D3B418              	100.00%		Q7RGS7              	100.00%
Bootstrap support for D3B418 as seed ortholog is 100%.
Bootstrap support for Q7RGS7 as seed ortholog is 100%.

Group of orthologs #552. Best score 166 bits
Score difference with first non-orthologous sequence - P.pallidum:166 P.yoelii:113

D3BMX5              	100.00%		Q7R814              	100.00%
Bootstrap support for D3BMX5 as seed ortholog is 100%.
Bootstrap support for Q7R814 as seed ortholog is 100%.

Group of orthologs #553. Best score 166 bits
Score difference with first non-orthologous sequence - P.pallidum:166 P.yoelii:166

D3BC80              	100.00%		Q7RRL5              	100.00%
Bootstrap support for D3BC80 as seed ortholog is 100%.
Bootstrap support for Q7RRL5 as seed ortholog is 100%.

Group of orthologs #554. Best score 166 bits
Score difference with first non-orthologous sequence - P.pallidum:166 P.yoelii:64

D3BGP9              	100.00%		Q7RS64              	100.00%
Bootstrap support for D3BGP9 as seed ortholog is 100%.
Bootstrap support for Q7RS64 as seed ortholog is 88%.

Group of orthologs #555. Best score 165 bits
Score difference with first non-orthologous sequence - P.pallidum:165 P.yoelii:165

D3B0C2              	100.00%		Q7RHN1              	100.00%
D3AZN2              	52.01%		
Bootstrap support for D3B0C2 as seed ortholog is 100%.
Bootstrap support for Q7RHN1 as seed ortholog is 100%.

Group of orthologs #556. Best score 165 bits
Score difference with first non-orthologous sequence - P.pallidum:83 P.yoelii:16

D3B4X1              	100.00%		Q7RLJ0              	100.00%
D3BL30              	8.53%		
Bootstrap support for D3B4X1 as seed ortholog is 95%.
Bootstrap support for Q7RLJ0 as seed ortholog is 62%.
Alternative seed ortholog is Q7R8Y2 (16 bits away from this cluster)

Group of orthologs #557. Best score 165 bits
Score difference with first non-orthologous sequence - P.pallidum:94 P.yoelii:165

D3BKV9              	100.00%		Q7R9Z2              	100.00%
Bootstrap support for D3BKV9 as seed ortholog is 97%.
Bootstrap support for Q7R9Z2 as seed ortholog is 100%.

Group of orthologs #558. Best score 165 bits
Score difference with first non-orthologous sequence - P.pallidum:165 P.yoelii:165

D3BHF9              	100.00%		Q7RHM9              	100.00%
Bootstrap support for D3BHF9 as seed ortholog is 100%.
Bootstrap support for Q7RHM9 as seed ortholog is 100%.

Group of orthologs #559. Best score 165 bits
Score difference with first non-orthologous sequence - P.pallidum:165 P.yoelii:165

D3BTM7              	100.00%		Q7RR09              	100.00%
Bootstrap support for D3BTM7 as seed ortholog is 100%.
Bootstrap support for Q7RR09 as seed ortholog is 100%.

Group of orthologs #560. Best score 164 bits
Score difference with first non-orthologous sequence - P.pallidum:164 P.yoelii:164

D3BEP4              	100.00%		Q7RSE5              	100.00%
                    	       		Q7RL01              	19.82%
Bootstrap support for D3BEP4 as seed ortholog is 100%.
Bootstrap support for Q7RSE5 as seed ortholog is 100%.

Group of orthologs #561. Best score 164 bits
Score difference with first non-orthologous sequence - P.pallidum:164 P.yoelii:164

D3BBH0              	100.00%		Q7RPR3              	100.00%
Bootstrap support for D3BBH0 as seed ortholog is 100%.
Bootstrap support for Q7RPR3 as seed ortholog is 100%.

Group of orthologs #562. Best score 164 bits
Score difference with first non-orthologous sequence - P.pallidum:110 P.yoelii:100

D3BPF6              	100.00%		Q7RCY2              	100.00%
Bootstrap support for D3BPF6 as seed ortholog is 100%.
Bootstrap support for Q7RCY2 as seed ortholog is 99%.

Group of orthologs #563. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:2 P.yoelii:163

D3BJ60              	100.00%		Q7RRE8              	100.00%
D3AXL6              	35.87%		Q7RT85              	8.40%
D3BB03              	27.34%		
D3BL12              	26.30%		
D3BUN6              	26.07%		
D3BKJ7              	23.18%		
D3BB13              	21.57%		
D3BCE4              	9.80%		
D3B314              	6.57%		
Bootstrap support for D3BJ60 as seed ortholog is 42%.
Alternative seed ortholog is D3B6N0 (2 bits away from this cluster)
Bootstrap support for Q7RRE8 as seed ortholog is 100%.

Group of orthologs #564. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:163 P.yoelii:8

D3B5Y1              	100.00%		Q7RDG3              	100.00%
Bootstrap support for D3B5Y1 as seed ortholog is 100%.
Bootstrap support for Q7RDG3 as seed ortholog is 56%.
Alternative seed ortholog is Q7RSH2 (8 bits away from this cluster)

Group of orthologs #565. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:163 P.yoelii:111

D3AZF9              	100.00%		Q7RRC5              	100.00%
Bootstrap support for D3AZF9 as seed ortholog is 100%.
Bootstrap support for Q7RRC5 as seed ortholog is 99%.

Group of orthologs #566. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:163 P.yoelii:163

D3BLE5              	100.00%		Q7PDL9              	100.00%
Bootstrap support for D3BLE5 as seed ortholog is 100%.
Bootstrap support for Q7PDL9 as seed ortholog is 100%.

Group of orthologs #567. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:163 P.yoelii:163

D3BAC0              	100.00%		Q7RQ12              	100.00%
Bootstrap support for D3BAC0 as seed ortholog is 100%.
Bootstrap support for Q7RQ12 as seed ortholog is 100%.

Group of orthologs #568. Best score 163 bits
Score difference with first non-orthologous sequence - P.pallidum:163 P.yoelii:163

D3BUI9              	100.00%		Q7RRB3              	100.00%
Bootstrap support for D3BUI9 as seed ortholog is 100%.
Bootstrap support for Q7RRB3 as seed ortholog is 100%.

Group of orthologs #569. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:162

D3AW49              	100.00%		Q7RA76              	100.00%
Bootstrap support for D3AW49 as seed ortholog is 100%.
Bootstrap support for Q7RA76 as seed ortholog is 100%.

Group of orthologs #570. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:162

D3AX55              	100.00%		Q7RCT1              	100.00%
Bootstrap support for D3AX55 as seed ortholog is 92%.
Bootstrap support for Q7RCT1 as seed ortholog is 100%.

Group of orthologs #571. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:29 P.yoelii:28

D3B2T9              	100.00%		Q7RR55              	100.00%
Bootstrap support for D3B2T9 as seed ortholog is 90%.
Bootstrap support for Q7RR55 as seed ortholog is 74%.
Alternative seed ortholog is Q7RDF1 (28 bits away from this cluster)

Group of orthologs #572. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:162

D3B615              	100.00%		Q7RP25              	100.00%
Bootstrap support for D3B615 as seed ortholog is 100%.
Bootstrap support for Q7RP25 as seed ortholog is 100%.

Group of orthologs #573. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:162

D3BMQ1              	100.00%		Q7RP72              	100.00%
Bootstrap support for D3BMQ1 as seed ortholog is 100%.
Bootstrap support for Q7RP72 as seed ortholog is 100%.

Group of orthologs #574. Best score 162 bits
Score difference with first non-orthologous sequence - P.pallidum:162 P.yoelii:162

D3BSM2              	100.00%		Q7RRK8              	100.00%
Bootstrap support for D3BSM2 as seed ortholog is 100%.
Bootstrap support for Q7RRK8 as seed ortholog is 100%.

Group of orthologs #575. Best score 161 bits
Score difference with first non-orthologous sequence - P.pallidum:161 P.yoelii:161

D3BT90              	100.00%		Q7RD37              	100.00%
D3AXS4              	11.29%		
Bootstrap support for D3BT90 as seed ortholog is 100%.
Bootstrap support for Q7RD37 as seed ortholog is 100%.

Group of orthologs #576. Best score 161 bits
Score difference with first non-orthologous sequence - P.pallidum:161 P.yoelii:161

D3AXT2              	100.00%		Q7RCQ0              	100.00%
Bootstrap support for D3AXT2 as seed ortholog is 100%.
Bootstrap support for Q7RCQ0 as seed ortholog is 100%.

Group of orthologs #577. Best score 161 bits
Score difference with first non-orthologous sequence - P.pallidum:161 P.yoelii:161

D3B7M3              	100.00%		Q7REK2              	100.00%
Bootstrap support for D3B7M3 as seed ortholog is 100%.
Bootstrap support for Q7REK2 as seed ortholog is 100%.

Group of orthologs #578. Best score 161 bits
Score difference with first non-orthologous sequence - P.pallidum:161 P.yoelii:161

D3BBK8              	100.00%		Q7RDV7              	100.00%
Bootstrap support for D3BBK8 as seed ortholog is 100%.
Bootstrap support for Q7RDV7 as seed ortholog is 100%.

Group of orthologs #579. Best score 161 bits
Score difference with first non-orthologous sequence - P.pallidum:161 P.yoelii:4

D3BI96              	100.00%		Q7RP82              	100.00%
Bootstrap support for D3BI96 as seed ortholog is 100%.
Bootstrap support for Q7RP82 as seed ortholog is 50%.
Alternative seed ortholog is Q7RN82 (4 bits away from this cluster)

Group of orthologs #580. Best score 160 bits
Score difference with first non-orthologous sequence - P.pallidum:160 P.yoelii:160

D3BAL0              	100.00%		Q7RC31              	100.00%
Bootstrap support for D3BAL0 as seed ortholog is 100%.
Bootstrap support for Q7RC31 as seed ortholog is 100%.

Group of orthologs #581. Best score 160 bits
Score difference with first non-orthologous sequence - P.pallidum:160 P.yoelii:160

D3B115              	100.00%		Q7RQ09              	100.00%
Bootstrap support for D3B115 as seed ortholog is 100%.
Bootstrap support for Q7RQ09 as seed ortholog is 100%.

Group of orthologs #582. Best score 160 bits
Score difference with first non-orthologous sequence - P.pallidum:160 P.yoelii:160

D3BBS0              	100.00%		Q7RM00              	100.00%
Bootstrap support for D3BBS0 as seed ortholog is 100%.
Bootstrap support for Q7RM00 as seed ortholog is 100%.

Group of orthologs #583. Best score 159 bits
Score difference with first non-orthologous sequence - P.pallidum:33 P.yoelii:14

D3B5B7              	100.00%		Q7RHM8              	100.00%
D3BMK5              	9.63%		
Bootstrap support for D3B5B7 as seed ortholog is 85%.
Bootstrap support for Q7RHM8 as seed ortholog is 49%.
Alternative seed ortholog is Q7R9H7 (14 bits away from this cluster)

Group of orthologs #584. Best score 159 bits
Score difference with first non-orthologous sequence - P.pallidum:159 P.yoelii:159

D3BD43              	100.00%		Q7RJI5              	100.00%
D3B2E5              	10.36%		
Bootstrap support for D3BD43 as seed ortholog is 100%.
Bootstrap support for Q7RJI5 as seed ortholog is 100%.

Group of orthologs #585. Best score 158 bits
Score difference with first non-orthologous sequence - P.pallidum:158 P.yoelii:158

D3B3J0              	100.00%		Q7RDM7              	100.00%
D3BK68              	8.38%		
Bootstrap support for D3B3J0 as seed ortholog is 100%.
Bootstrap support for Q7RDM7 as seed ortholog is 100%.

Group of orthologs #586. Best score 158 bits
Score difference with first non-orthologous sequence - P.pallidum:158 P.yoelii:158

D3BIR6              	100.00%		Q7RD61              	100.00%
Bootstrap support for D3BIR6 as seed ortholog is 100%.
Bootstrap support for Q7RD61 as seed ortholog is 100%.

Group of orthologs #587. Best score 158 bits
Score difference with first non-orthologous sequence - P.pallidum:158 P.yoelii:158

D3BLV1              	100.00%		Q7RKQ4              	100.00%
Bootstrap support for D3BLV1 as seed ortholog is 100%.
Bootstrap support for Q7RKQ4 as seed ortholog is 100%.

Group of orthologs #588. Best score 158 bits
Score difference with first non-orthologous sequence - P.pallidum:158 P.yoelii:158

D3BK44              	100.00%		Q7RNS4              	100.00%
Bootstrap support for D3BK44 as seed ortholog is 100%.
Bootstrap support for Q7RNS4 as seed ortholog is 100%.

Group of orthologs #589. Best score 157 bits
Score difference with first non-orthologous sequence - P.pallidum:157 P.yoelii:157

D3BKC7              	100.00%		Q7RFI6              	100.00%
D3AZQ1              	6.86%		
Bootstrap support for D3BKC7 as seed ortholog is 100%.
Bootstrap support for Q7RFI6 as seed ortholog is 100%.

Group of orthologs #590. Best score 157 bits
Score difference with first non-orthologous sequence - P.pallidum:157 P.yoelii:157

D3AWD3              	100.00%		Q7RMV8              	100.00%
Bootstrap support for D3AWD3 as seed ortholog is 100%.
Bootstrap support for Q7RMV8 as seed ortholog is 100%.

Group of orthologs #591. Best score 157 bits
Score difference with first non-orthologous sequence - P.pallidum:157 P.yoelii:157

D3B3R7              	100.00%		Q7RST8              	100.00%
Bootstrap support for D3B3R7 as seed ortholog is 100%.
Bootstrap support for Q7RST8 as seed ortholog is 100%.

Group of orthologs #592. Best score 157 bits
Score difference with first non-orthologous sequence - P.pallidum:157 P.yoelii:157

D3BKA5              	100.00%		Q7RG18              	100.00%
Bootstrap support for D3BKA5 as seed ortholog is 100%.
Bootstrap support for Q7RG18 as seed ortholog is 100%.

Group of orthologs #593. Best score 157 bits
Score difference with first non-orthologous sequence - P.pallidum:157 P.yoelii:157

D3BR06              	100.00%		Q7RFX9              	100.00%
Bootstrap support for D3BR06 as seed ortholog is 100%.
Bootstrap support for Q7RFX9 as seed ortholog is 100%.

Group of orthologs #594. Best score 156 bits
Score difference with first non-orthologous sequence - P.pallidum:156 P.yoelii:156

D3BB37              	100.00%		Q7RCK7              	100.00%
Bootstrap support for D3BB37 as seed ortholog is 100%.
Bootstrap support for Q7RCK7 as seed ortholog is 100%.

Group of orthologs #595. Best score 156 bits
Score difference with first non-orthologous sequence - P.pallidum:19 P.yoelii:57

D3B233              	100.00%		Q7RNK1              	100.00%
Bootstrap support for D3B233 as seed ortholog is 92%.
Bootstrap support for Q7RNK1 as seed ortholog is 99%.

Group of orthologs #596. Best score 156 bits
Score difference with first non-orthologous sequence - P.pallidum:156 P.yoelii:156

D3BH30              	100.00%		Q7RH48              	100.00%
Bootstrap support for D3BH30 as seed ortholog is 100%.
Bootstrap support for Q7RH48 as seed ortholog is 100%.

Group of orthologs #597. Best score 156 bits
Score difference with first non-orthologous sequence - P.pallidum:35 P.yoelii:156

D3BT18              	100.00%		Q7RDU0              	100.00%
Bootstrap support for D3BT18 as seed ortholog is 53%.
Alternative seed ortholog is D3BFS0 (35 bits away from this cluster)
Bootstrap support for Q7RDU0 as seed ortholog is 100%.

Group of orthologs #598. Best score 155 bits
Score difference with first non-orthologous sequence - P.pallidum:155 P.yoelii:155

D3AZD5              	100.00%		Q7RBN9              	100.00%
Bootstrap support for D3AZD5 as seed ortholog is 100%.
Bootstrap support for Q7RBN9 as seed ortholog is 100%.

Group of orthologs #599. Best score 155 bits
Score difference with first non-orthologous sequence - P.pallidum:155 P.yoelii:155

D3BPP9              	100.00%		Q7PDT7              	100.00%
Bootstrap support for D3BPP9 as seed ortholog is 100%.
Bootstrap support for Q7PDT7 as seed ortholog is 100%.

Group of orthologs #600. Best score 155 bits
Score difference with first non-orthologous sequence - P.pallidum:155 P.yoelii:155

D3BM56              	100.00%		Q7RNI8              	100.00%
Bootstrap support for D3BM56 as seed ortholog is 100%.
Bootstrap support for Q7RNI8 as seed ortholog is 100%.

Group of orthologs #601. Best score 155 bits
Score difference with first non-orthologous sequence - P.pallidum:155 P.yoelii:155

D3BNZ1              	100.00%		Q7RS47              	100.00%
Bootstrap support for D3BNZ1 as seed ortholog is 100%.
Bootstrap support for Q7RS47 as seed ortholog is 100%.

Group of orthologs #602. Best score 154 bits
Score difference with first non-orthologous sequence - P.pallidum:154 P.yoelii:154

D3B439              	100.00%		Q7RQZ6              	100.00%
Bootstrap support for D3B439 as seed ortholog is 100%.
Bootstrap support for Q7RQZ6 as seed ortholog is 100%.

Group of orthologs #603. Best score 153 bits
Score difference with first non-orthologous sequence - P.pallidum:153 P.yoelii:153

D3BQB2              	100.00%		Q7RR38              	100.00%
D3BQB6              	31.29%		
Bootstrap support for D3BQB2 as seed ortholog is 100%.
Bootstrap support for Q7RR38 as seed ortholog is 100%.

Group of orthologs #604. Best score 153 bits
Score difference with first non-orthologous sequence - P.pallidum:153 P.yoelii:153

D3AVU9              	100.00%		Q7RMT7              	100.00%
Bootstrap support for D3AVU9 as seed ortholog is 100%.
Bootstrap support for Q7RMT7 as seed ortholog is 100%.

Group of orthologs #605. Best score 153 bits
Score difference with first non-orthologous sequence - P.pallidum:51 P.yoelii:153

D3BI06              	100.00%		Q7RHW9              	100.00%
Bootstrap support for D3BI06 as seed ortholog is 99%.
Bootstrap support for Q7RHW9 as seed ortholog is 100%.

Group of orthologs #606. Best score 152 bits
Score difference with first non-orthologous sequence - P.pallidum:152 P.yoelii:152

D3B5X8              	100.00%		Q7RL68              	100.00%
D3B4E5              	11.95%		
Bootstrap support for D3B5X8 as seed ortholog is 100%.
Bootstrap support for Q7RL68 as seed ortholog is 100%.

Group of orthologs #607. Best score 152 bits
Score difference with first non-orthologous sequence - P.pallidum:23 P.yoelii:152

D3BJM3              	100.00%		Q7RR70              	100.00%
D3BPM9              	5.31%		
Bootstrap support for D3BJM3 as seed ortholog is 79%.
Bootstrap support for Q7RR70 as seed ortholog is 100%.

Group of orthologs #608. Best score 152 bits
Score difference with first non-orthologous sequence - P.pallidum:41 P.yoelii:152

D3BKS2              	100.00%		Q7RFR2              	100.00%
Bootstrap support for D3BKS2 as seed ortholog is 95%.
Bootstrap support for Q7RFR2 as seed ortholog is 100%.

Group of orthologs #609. Best score 151 bits
Score difference with first non-orthologous sequence - P.pallidum:151 P.yoelii:151

D3B437              	100.00%		Q7RT13              	100.00%
Bootstrap support for D3B437 as seed ortholog is 100%.
Bootstrap support for Q7RT13 as seed ortholog is 100%.

Group of orthologs #610. Best score 151 bits
Score difference with first non-orthologous sequence - P.pallidum:151 P.yoelii:151

D3BM11              	100.00%		Q7RAX9              	100.00%
Bootstrap support for D3BM11 as seed ortholog is 100%.
Bootstrap support for Q7RAX9 as seed ortholog is 100%.

Group of orthologs #611. Best score 151 bits
Score difference with first non-orthologous sequence - P.pallidum:151 P.yoelii:151

D3BRH9              	100.00%		Q7RLK5              	100.00%
Bootstrap support for D3BRH9 as seed ortholog is 100%.
Bootstrap support for Q7RLK5 as seed ortholog is 100%.

Group of orthologs #612. Best score 150 bits
Score difference with first non-orthologous sequence - P.pallidum:150 P.yoelii:150

D3B114              	100.00%		Q7RT66              	100.00%
Bootstrap support for D3B114 as seed ortholog is 100%.
Bootstrap support for Q7RT66 as seed ortholog is 100%.

Group of orthologs #613. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:64

D3BSZ1              	100.00%		Q7RS45              	100.00%
D3BGI1              	15.97%		
D3B8C9              	13.32%		
Bootstrap support for D3BSZ1 as seed ortholog is 100%.
Bootstrap support for Q7RS45 as seed ortholog is 94%.

Group of orthologs #614. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:149

D3BAH6              	100.00%		Q7RA40              	100.00%
Bootstrap support for D3BAH6 as seed ortholog is 100%.
Bootstrap support for Q7RA40 as seed ortholog is 100%.

Group of orthologs #615. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:90

D3B0F6              	100.00%		Q7RL61              	100.00%
Bootstrap support for D3B0F6 as seed ortholog is 100%.
Bootstrap support for Q7RL61 as seed ortholog is 99%.

Group of orthologs #616. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:149

D3BKB6              	100.00%		Q7R8N6              	100.00%
Bootstrap support for D3BKB6 as seed ortholog is 100%.
Bootstrap support for Q7R8N6 as seed ortholog is 100%.

Group of orthologs #617. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:149

D3BCE9              	100.00%		Q7RNJ3              	100.00%
Bootstrap support for D3BCE9 as seed ortholog is 100%.
Bootstrap support for Q7RNJ3 as seed ortholog is 100%.

Group of orthologs #618. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:12 P.yoelii:149

D3BAN9              	100.00%		Q7RT38              	100.00%
Bootstrap support for D3BAN9 as seed ortholog is 65%.
Alternative seed ortholog is D3BGU4 (12 bits away from this cluster)
Bootstrap support for Q7RT38 as seed ortholog is 100%.

Group of orthologs #619. Best score 149 bits
Score difference with first non-orthologous sequence - P.pallidum:149 P.yoelii:149

D3BJY4              	100.00%		Q7RPI6              	100.00%
Bootstrap support for D3BJY4 as seed ortholog is 100%.
Bootstrap support for Q7RPI6 as seed ortholog is 100%.

Group of orthologs #620. Best score 148 bits
Score difference with first non-orthologous sequence - P.pallidum:148 P.yoelii:148

D3AVH8              	100.00%		Q7RM63              	100.00%
Bootstrap support for D3AVH8 as seed ortholog is 100%.
Bootstrap support for Q7RM63 as seed ortholog is 100%.

Group of orthologs #621. Best score 148 bits
Score difference with first non-orthologous sequence - P.pallidum:148 P.yoelii:148

D3BIZ7              	100.00%		Q7RC99              	100.00%
Bootstrap support for D3BIZ7 as seed ortholog is 100%.
Bootstrap support for Q7RC99 as seed ortholog is 100%.

Group of orthologs #622. Best score 148 bits
Score difference with first non-orthologous sequence - P.pallidum:148 P.yoelii:148

D3BCF4              	100.00%		Q7RT78              	100.00%
Bootstrap support for D3BCF4 as seed ortholog is 100%.
Bootstrap support for Q7RT78 as seed ortholog is 100%.

Group of orthologs #623. Best score 147 bits
Score difference with first non-orthologous sequence - P.pallidum:147 P.yoelii:147

D3AVI8              	100.00%		Q7RG46              	100.00%
                    	       		Q7R7X9              	48.45%
Bootstrap support for D3AVI8 as seed ortholog is 100%.
Bootstrap support for Q7RG46 as seed ortholog is 100%.

Group of orthologs #624. Best score 147 bits
Score difference with first non-orthologous sequence - P.pallidum:147 P.yoelii:147

D3B6L1              	100.00%		Q7RBS3              	100.00%
Bootstrap support for D3B6L1 as seed ortholog is 100%.
Bootstrap support for Q7RBS3 as seed ortholog is 100%.

Group of orthologs #625. Best score 147 bits
Score difference with first non-orthologous sequence - P.pallidum:88 P.yoelii:147

D3AYW2              	100.00%		Q7RS95              	100.00%
Bootstrap support for D3AYW2 as seed ortholog is 97%.
Bootstrap support for Q7RS95 as seed ortholog is 100%.

Group of orthologs #626. Best score 147 bits
Score difference with first non-orthologous sequence - P.pallidum:147 P.yoelii:147

D3BMJ9              	100.00%		Q7R8S0              	100.00%
Bootstrap support for D3BMJ9 as seed ortholog is 100%.
Bootstrap support for Q7R8S0 as seed ortholog is 100%.

Group of orthologs #627. Best score 147 bits
Score difference with first non-orthologous sequence - P.pallidum:147 P.yoelii:147

D3BFX3              	100.00%		Q7RH50              	100.00%
Bootstrap support for D3BFX3 as seed ortholog is 100%.
Bootstrap support for Q7RH50 as seed ortholog is 100%.

Group of orthologs #628. Best score 147 bits
Score difference with first non-orthologous sequence - P.pallidum:19 P.yoelii:48

D3BFQ8              	100.00%		Q7RLT3              	100.00%
Bootstrap support for D3BFQ8 as seed ortholog is 99%.
Bootstrap support for Q7RLT3 as seed ortholog is 99%.

Group of orthologs #629. Best score 146 bits
Score difference with first non-orthologous sequence - P.pallidum:42 P.yoelii:146

D3B6C9              	100.00%		Q7RAP8              	100.00%
Bootstrap support for D3B6C9 as seed ortholog is 96%.
Bootstrap support for Q7RAP8 as seed ortholog is 100%.

Group of orthologs #630. Best score 146 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:146

D3B822              	100.00%		Q7RA63              	100.00%
Bootstrap support for D3B822 as seed ortholog is 100%.
Bootstrap support for Q7RA63 as seed ortholog is 100%.

Group of orthologs #631. Best score 146 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:146

D3AVQ5              	100.00%		Q7RQ22              	100.00%
Bootstrap support for D3AVQ5 as seed ortholog is 100%.
Bootstrap support for Q7RQ22 as seed ortholog is 100%.

Group of orthologs #632. Best score 146 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:146

D3BT25              	100.00%		Q7R9L8              	100.00%
Bootstrap support for D3BT25 as seed ortholog is 100%.
Bootstrap support for Q7R9L8 as seed ortholog is 100%.

Group of orthologs #633. Best score 146 bits
Score difference with first non-orthologous sequence - P.pallidum:146 P.yoelii:146

D3BQQ9              	100.00%		Q7RIM0              	100.00%
Bootstrap support for D3BQQ9 as seed ortholog is 100%.
Bootstrap support for Q7RIM0 as seed ortholog is 100%.

Group of orthologs #634. Best score 145 bits
Score difference with first non-orthologous sequence - P.pallidum:145 P.yoelii:145

D3BCF9              	100.00%		Q7RI17              	100.00%
Bootstrap support for D3BCF9 as seed ortholog is 100%.
Bootstrap support for Q7RI17 as seed ortholog is 100%.

Group of orthologs #635. Best score 144 bits
Score difference with first non-orthologous sequence - P.pallidum:144 P.yoelii:144

D3BFU9              	100.00%		Q7RGR1              	100.00%
D3BFU8              	17.33%		
Bootstrap support for D3BFU9 as seed ortholog is 100%.
Bootstrap support for Q7RGR1 as seed ortholog is 100%.

Group of orthologs #636. Best score 144 bits
Score difference with first non-orthologous sequence - P.pallidum:26 P.yoelii:144

D3B4B8              	100.00%		Q7RLX2              	100.00%
Bootstrap support for D3B4B8 as seed ortholog is 78%.
Bootstrap support for Q7RLX2 as seed ortholog is 100%.

Group of orthologs #637. Best score 144 bits
Score difference with first non-orthologous sequence - P.pallidum:144 P.yoelii:144

D3BQE1              	100.00%		Q7RPQ7              	100.00%
Bootstrap support for D3BQE1 as seed ortholog is 100%.
Bootstrap support for Q7RPQ7 as seed ortholog is 100%.

Group of orthologs #638. Best score 143 bits
Score difference with first non-orthologous sequence - P.pallidum:143 P.yoelii:143

D3B2R7              	100.00%		Q7RN26              	100.00%
Bootstrap support for D3B2R7 as seed ortholog is 100%.
Bootstrap support for Q7RN26 as seed ortholog is 100%.

Group of orthologs #639. Best score 143 bits
Score difference with first non-orthologous sequence - P.pallidum:93 P.yoelii:50

D3BTD3              	100.00%		Q7R7K9              	100.00%
Bootstrap support for D3BTD3 as seed ortholog is 99%.
Bootstrap support for Q7R7K9 as seed ortholog is 99%.

Group of orthologs #640. Best score 143 bits
Score difference with first non-orthologous sequence - P.pallidum:21 P.yoelii:22

D3BL06              	100.00%		Q7RM75              	100.00%
Bootstrap support for D3BL06 as seed ortholog is 82%.
Bootstrap support for Q7RM75 as seed ortholog is 82%.

Group of orthologs #641. Best score 143 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:143

D3BLA0              	100.00%		Q7RSX7              	100.00%
Bootstrap support for D3BLA0 as seed ortholog is 99%.
Bootstrap support for Q7RSX7 as seed ortholog is 100%.

Group of orthologs #642. Best score 143 bits
Score difference with first non-orthologous sequence - P.pallidum:143 P.yoelii:143

D3BQA1              	100.00%		Q7RSJ5              	100.00%
Bootstrap support for D3BQA1 as seed ortholog is 100%.
Bootstrap support for Q7RSJ5 as seed ortholog is 100%.

Group of orthologs #643. Best score 142 bits
Score difference with first non-orthologous sequence - P.pallidum:142 P.yoelii:142

D3B895              	100.00%		Q7R793              	100.00%
Bootstrap support for D3B895 as seed ortholog is 100%.
Bootstrap support for Q7R793 as seed ortholog is 100%.

Group of orthologs #644. Best score 141 bits
Score difference with first non-orthologous sequence - P.pallidum:141 P.yoelii:141

D3BS99              	100.00%		Q7RGE7              	100.00%
Bootstrap support for D3BS99 as seed ortholog is 100%.
Bootstrap support for Q7RGE7 as seed ortholog is 100%.

Group of orthologs #645. Best score 141 bits
Score difference with first non-orthologous sequence - P.pallidum:141 P.yoelii:44

D3BK33              	100.00%		Q7RSH6              	100.00%
Bootstrap support for D3BK33 as seed ortholog is 100%.
Bootstrap support for Q7RSH6 as seed ortholog is 89%.

Group of orthologs #646. Best score 141 bits
Score difference with first non-orthologous sequence - P.pallidum:10 P.yoelii:66

D3BVG0              	100.00%		Q7RN69              	100.00%
Bootstrap support for D3BVG0 as seed ortholog is 68%.
Alternative seed ortholog is D3BJU9 (10 bits away from this cluster)
Bootstrap support for Q7RN69 as seed ortholog is 96%.

Group of orthologs #647. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:34 P.yoelii:140

D3BN32              	100.00%		Q7RLK9              	100.00%
D3B294              	63.00%		
D3BN31              	50.85%		
Bootstrap support for D3BN32 as seed ortholog is 75%.
Bootstrap support for Q7RLK9 as seed ortholog is 100%.

Group of orthologs #648. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:140 P.yoelii:140

D3B5G2              	100.00%		Q7RIJ9              	100.00%
Bootstrap support for D3B5G2 as seed ortholog is 100%.
Bootstrap support for Q7RIJ9 as seed ortholog is 100%.

Group of orthologs #649. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:140 P.yoelii:140

D3B7U1              	100.00%		Q7RJT7              	100.00%
Bootstrap support for D3B7U1 as seed ortholog is 100%.
Bootstrap support for Q7RJT7 as seed ortholog is 100%.

Group of orthologs #650. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:140 P.yoelii:140

D3BAR1              	100.00%		Q7RJJ3              	100.00%
Bootstrap support for D3BAR1 as seed ortholog is 100%.
Bootstrap support for Q7RJJ3 as seed ortholog is 100%.

Group of orthologs #651. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:140 P.yoelii:140

D3BEV9              	100.00%		Q7RR10              	100.00%
Bootstrap support for D3BEV9 as seed ortholog is 100%.
Bootstrap support for Q7RR10 as seed ortholog is 100%.

Group of orthologs #652. Best score 140 bits
Score difference with first non-orthologous sequence - P.pallidum:140 P.yoelii:140

D3BS88              	100.00%		Q7RDR2              	100.00%
Bootstrap support for D3BS88 as seed ortholog is 100%.
Bootstrap support for Q7RDR2 as seed ortholog is 100%.

Group of orthologs #653. Best score 139 bits
Score difference with first non-orthologous sequence - P.pallidum:78 P.yoelii:68

D3BCG7              	100.00%		Q7RP38              	100.00%
Bootstrap support for D3BCG7 as seed ortholog is 99%.
Bootstrap support for Q7RP38 as seed ortholog is 99%.

Group of orthologs #654. Best score 139 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:139

D3BL52              	100.00%		Q7RGV4              	100.00%
Bootstrap support for D3BL52 as seed ortholog is 92%.
Bootstrap support for Q7RGV4 as seed ortholog is 100%.

Group of orthologs #655. Best score 138 bits
Score difference with first non-orthologous sequence - P.pallidum:138 P.yoelii:138

D3B205              	100.00%		Q7RTD3              	100.00%
D3B2A7              	49.56%		
Bootstrap support for D3B205 as seed ortholog is 100%.
Bootstrap support for Q7RTD3 as seed ortholog is 100%.

Group of orthologs #656. Best score 138 bits
Score difference with first non-orthologous sequence - P.pallidum:138 P.yoelii:138

D3B583              	100.00%		Q7RED9              	100.00%
Bootstrap support for D3B583 as seed ortholog is 100%.
Bootstrap support for Q7RED9 as seed ortholog is 100%.

Group of orthologs #657. Best score 138 bits
Score difference with first non-orthologous sequence - P.pallidum:138 P.yoelii:138

D3B7P9              	100.00%		Q7RBX7              	100.00%
Bootstrap support for D3B7P9 as seed ortholog is 100%.
Bootstrap support for Q7RBX7 as seed ortholog is 100%.

Group of orthologs #658. Best score 138 bits
Score difference with first non-orthologous sequence - P.pallidum:138 P.yoelii:138

D3B9F1              	100.00%		Q7RPT7              	100.00%
Bootstrap support for D3B9F1 as seed ortholog is 100%.
Bootstrap support for Q7RPT7 as seed ortholog is 100%.

Group of orthologs #659. Best score 138 bits
Score difference with first non-orthologous sequence - P.pallidum:33 P.yoelii:138

D3BLM4              	100.00%		Q7RSQ9              	100.00%
Bootstrap support for D3BLM4 as seed ortholog is 83%.
Bootstrap support for Q7RSQ9 as seed ortholog is 100%.

Group of orthologs #660. Best score 137 bits
Score difference with first non-orthologous sequence - P.pallidum:60 P.yoelii:70

D3BCF1              	100.00%		Q7RGX1              	100.00%
Bootstrap support for D3BCF1 as seed ortholog is 99%.
Bootstrap support for Q7RGX1 as seed ortholog is 94%.

Group of orthologs #661. Best score 137 bits
Score difference with first non-orthologous sequence - P.pallidum:137 P.yoelii:137

D3B334              	100.00%		Q7RRA4              	100.00%
Bootstrap support for D3B334 as seed ortholog is 100%.
Bootstrap support for Q7RRA4 as seed ortholog is 100%.

Group of orthologs #662. Best score 137 bits
Score difference with first non-orthologous sequence - P.pallidum:137 P.yoelii:137

D3BBS3              	100.00%		Q7RN07              	100.00%
Bootstrap support for D3BBS3 as seed ortholog is 100%.
Bootstrap support for Q7RN07 as seed ortholog is 100%.

Group of orthologs #663. Best score 137 bits
Score difference with first non-orthologous sequence - P.pallidum:61 P.yoelii:137

D3BTV0              	100.00%		Q7R7Y5              	100.00%
Bootstrap support for D3BTV0 as seed ortholog is 97%.
Bootstrap support for Q7R7Y5 as seed ortholog is 100%.

Group of orthologs #664. Best score 137 bits
Score difference with first non-orthologous sequence - P.pallidum:137 P.yoelii:137

D3BVK2              	100.00%		Q7REW8              	100.00%
Bootstrap support for D3BVK2 as seed ortholog is 100%.
Bootstrap support for Q7REW8 as seed ortholog is 100%.

Group of orthologs #665. Best score 136 bits
Score difference with first non-orthologous sequence - P.pallidum:136 P.yoelii:136

D3AVM9              	100.00%		Q7RG43              	100.00%
Bootstrap support for D3AVM9 as seed ortholog is 100%.
Bootstrap support for Q7RG43 as seed ortholog is 100%.

Group of orthologs #666. Best score 136 bits
Score difference with first non-orthologous sequence - P.pallidum:6 P.yoelii:136

D3BGW7              	100.00%		Q7R9X4              	100.00%
Bootstrap support for D3BGW7 as seed ortholog is 36%.
Alternative seed ortholog is D3AW72 (6 bits away from this cluster)
Bootstrap support for Q7R9X4 as seed ortholog is 100%.

Group of orthologs #667. Best score 136 bits
Score difference with first non-orthologous sequence - P.pallidum:136 P.yoelii:136

D3BU79              	100.00%		Q7RNP0              	100.00%
Bootstrap support for D3BU79 as seed ortholog is 100%.
Bootstrap support for Q7RNP0 as seed ortholog is 100%.

Group of orthologs #668. Best score 136 bits
Score difference with first non-orthologous sequence - P.pallidum:136 P.yoelii:136

D3BTM3              	100.00%		Q7RQ75              	100.00%
Bootstrap support for D3BTM3 as seed ortholog is 100%.
Bootstrap support for Q7RQ75 as seed ortholog is 100%.

Group of orthologs #669. Best score 135 bits
Score difference with first non-orthologous sequence - P.pallidum:135 P.yoelii:135

D3BDG0              	100.00%		Q7RM76              	100.00%
Bootstrap support for D3BDG0 as seed ortholog is 100%.
Bootstrap support for Q7RM76 as seed ortholog is 100%.

Group of orthologs #670. Best score 135 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:135

D3BKJ2              	100.00%		Q7RIZ7              	100.00%
Bootstrap support for D3BKJ2 as seed ortholog is 99%.
Bootstrap support for Q7RIZ7 as seed ortholog is 100%.

Group of orthologs #671. Best score 135 bits
Score difference with first non-orthologous sequence - P.pallidum:135 P.yoelii:135

D3BUX6              	100.00%		Q7RDC2              	100.00%
Bootstrap support for D3BUX6 as seed ortholog is 100%.
Bootstrap support for Q7RDC2 as seed ortholog is 100%.

Group of orthologs #672. Best score 135 bits
Score difference with first non-orthologous sequence - P.pallidum:135 P.yoelii:135

D3BRI8              	100.00%		Q7RJ03              	100.00%
Bootstrap support for D3BRI8 as seed ortholog is 100%.
Bootstrap support for Q7RJ03 as seed ortholog is 100%.

Group of orthologs #673. Best score 135 bits
Score difference with first non-orthologous sequence - P.pallidum:135 P.yoelii:43

D3BQD0              	100.00%		Q7RQA6              	100.00%
Bootstrap support for D3BQD0 as seed ortholog is 100%.
Bootstrap support for Q7RQA6 as seed ortholog is 97%.

Group of orthologs #674. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 P.yoelii:134

D3AZG7              	100.00%		Q7RJV7              	100.00%
Bootstrap support for D3AZG7 as seed ortholog is 100%.
Bootstrap support for Q7RJV7 as seed ortholog is 100%.

Group of orthologs #675. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 P.yoelii:134

D3AZP5              	100.00%		Q7RMF5              	100.00%
Bootstrap support for D3AZP5 as seed ortholog is 100%.
Bootstrap support for Q7RMF5 as seed ortholog is 100%.

Group of orthologs #676. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 P.yoelii:134

D3BLT5              	100.00%		Q7RC04              	100.00%
Bootstrap support for D3BLT5 as seed ortholog is 100%.
Bootstrap support for Q7RC04 as seed ortholog is 100%.

Group of orthologs #677. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 P.yoelii:134

D3BT12              	100.00%		Q7R7C5              	100.00%
Bootstrap support for D3BT12 as seed ortholog is 100%.
Bootstrap support for Q7R7C5 as seed ortholog is 100%.

Group of orthologs #678. Best score 134 bits
Score difference with first non-orthologous sequence - P.pallidum:134 P.yoelii:134

D3BTD9              	100.00%		Q7RBX2              	100.00%
Bootstrap support for D3BTD9 as seed ortholog is 100%.
Bootstrap support for Q7RBX2 as seed ortholog is 100%.

Group of orthologs #679. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:133

D3AW01              	100.00%		Q7RAN4              	100.00%
Bootstrap support for D3AW01 as seed ortholog is 100%.
Bootstrap support for Q7RAN4 as seed ortholog is 100%.

Group of orthologs #680. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:133

D3B9D0              	100.00%		Q7RR83              	100.00%
Bootstrap support for D3B9D0 as seed ortholog is 100%.
Bootstrap support for Q7RR83 as seed ortholog is 100%.

Group of orthologs #681. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:133

D3BPG0              	100.00%		Q7RCI1              	100.00%
Bootstrap support for D3BPG0 as seed ortholog is 100%.
Bootstrap support for Q7RCI1 as seed ortholog is 100%.

Group of orthologs #682. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:133

D3BGE0              	100.00%		Q7RLI3              	100.00%
Bootstrap support for D3BGE0 as seed ortholog is 100%.
Bootstrap support for Q7RLI3 as seed ortholog is 100%.

Group of orthologs #683. Best score 133 bits
Score difference with first non-orthologous sequence - P.pallidum:133 P.yoelii:133

D3BK89              	100.00%		Q7RJG0              	100.00%
Bootstrap support for D3BK89 as seed ortholog is 100%.
Bootstrap support for Q7RJG0 as seed ortholog is 100%.

Group of orthologs #684. Best score 132 bits
Score difference with first non-orthologous sequence - P.pallidum:132 P.yoelii:21

D3AWL9              	100.00%		Q7RLT1              	100.00%
Bootstrap support for D3AWL9 as seed ortholog is 100%.
Bootstrap support for Q7RLT1 as seed ortholog is 76%.

Group of orthologs #685. Best score 132 bits
Score difference with first non-orthologous sequence - P.pallidum:132 P.yoelii:132

D3BBS5              	100.00%		Q7RLF1              	100.00%
Bootstrap support for D3BBS5 as seed ortholog is 100%.
Bootstrap support for Q7RLF1 as seed ortholog is 100%.

Group of orthologs #686. Best score 132 bits
Score difference with first non-orthologous sequence - P.pallidum:132 P.yoelii:132

D3BGC7              	100.00%		Q7RQX0              	100.00%
Bootstrap support for D3BGC7 as seed ortholog is 100%.
Bootstrap support for Q7RQX0 as seed ortholog is 100%.

Group of orthologs #687. Best score 132 bits
Score difference with first non-orthologous sequence - P.pallidum:132 P.yoelii:132

D3BRM7              	100.00%		Q7RS28              	100.00%
Bootstrap support for D3BRM7 as seed ortholog is 100%.
Bootstrap support for Q7RS28 as seed ortholog is 100%.

Group of orthologs #688. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:131

D3BMK7              	100.00%		Q7RA92              	100.00%
D3B2D5              	46.15%		
Bootstrap support for D3BMK7 as seed ortholog is 100%.
Bootstrap support for Q7RA92 as seed ortholog is 100%.

Group of orthologs #689. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:131

D3BB15              	100.00%		Q7RSB5              	100.00%
D3BIM9              	37.77%		
Bootstrap support for D3BB15 as seed ortholog is 100%.
Bootstrap support for Q7RSB5 as seed ortholog is 100%.

Group of orthologs #690. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:131

D3AZM6              	100.00%		Q7RE67              	100.00%
Bootstrap support for D3AZM6 as seed ortholog is 100%.
Bootstrap support for Q7RE67 as seed ortholog is 100%.

Group of orthologs #691. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:131

D3B636              	100.00%		Q7RKJ1              	100.00%
Bootstrap support for D3B636 as seed ortholog is 99%.
Bootstrap support for Q7RKJ1 as seed ortholog is 100%.

Group of orthologs #692. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:131

D3BLZ4              	100.00%		Q7PDV8              	100.00%
Bootstrap support for D3BLZ4 as seed ortholog is 100%.
Bootstrap support for Q7PDV8 as seed ortholog is 100%.

Group of orthologs #693. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:131

D3B6N8              	100.00%		Q7RQE8              	100.00%
Bootstrap support for D3B6N8 as seed ortholog is 100%.
Bootstrap support for Q7RQE8 as seed ortholog is 100%.

Group of orthologs #694. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:47 P.yoelii:131

D3BHT1              	100.00%		Q7RM67              	100.00%
Bootstrap support for D3BHT1 as seed ortholog is 96%.
Bootstrap support for Q7RM67 as seed ortholog is 100%.

Group of orthologs #695. Best score 131 bits
Score difference with first non-orthologous sequence - P.pallidum:131 P.yoelii:131

D3BH91              	100.00%		Q7RN17              	100.00%
Bootstrap support for D3BH91 as seed ortholog is 100%.
Bootstrap support for Q7RN17 as seed ortholog is 100%.

Group of orthologs #696. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:1 P.yoelii:48

D3B8B0              	100.00%		Q7RGQ7              	100.00%
Bootstrap support for D3B8B0 as seed ortholog is 56%.
Alternative seed ortholog is D3BT03 (1 bits away from this cluster)
Bootstrap support for Q7RGQ7 as seed ortholog is 76%.

Group of orthologs #697. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:60 P.yoelii:130

D3BKA2              	100.00%		Q7R8R1              	100.00%
Bootstrap support for D3BKA2 as seed ortholog is 99%.
Bootstrap support for Q7R8R1 as seed ortholog is 100%.

Group of orthologs #698. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:130 P.yoelii:130

D3BD59              	100.00%		Q7RIY6              	100.00%
Bootstrap support for D3BD59 as seed ortholog is 100%.
Bootstrap support for Q7RIY6 as seed ortholog is 100%.

Group of orthologs #699. Best score 130 bits
Score difference with first non-orthologous sequence - P.pallidum:130 P.yoelii:130

D3BH56              	100.00%		Q7RJA6              	100.00%
Bootstrap support for D3BH56 as seed ortholog is 100%.
Bootstrap support for Q7RJA6 as seed ortholog is 100%.

Group of orthologs #700. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:129 P.yoelii:129

D3AW12              	100.00%		Q7RS88              	100.00%
Bootstrap support for D3AW12 as seed ortholog is 100%.
Bootstrap support for Q7RS88 as seed ortholog is 100%.

Group of orthologs #701. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:52 P.yoelii:129

D3BHM0              	100.00%		Q7RI83              	100.00%
Bootstrap support for D3BHM0 as seed ortholog is 98%.
Bootstrap support for Q7RI83 as seed ortholog is 100%.

Group of orthologs #702. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:129 P.yoelii:129

D3BCX0              	100.00%		Q7RSC4              	100.00%
Bootstrap support for D3BCX0 as seed ortholog is 100%.
Bootstrap support for Q7RSC4 as seed ortholog is 100%.

Group of orthologs #703. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:129 P.yoelii:129

D3BHP3              	100.00%		Q7RNU7              	100.00%
Bootstrap support for D3BHP3 as seed ortholog is 100%.
Bootstrap support for Q7RNU7 as seed ortholog is 100%.

Group of orthologs #704. Best score 129 bits
Score difference with first non-orthologous sequence - P.pallidum:129 P.yoelii:42

D3BPC7              	100.00%		Q7RSF3              	100.00%
Bootstrap support for D3BPC7 as seed ortholog is 100%.
Bootstrap support for Q7RSF3 as seed ortholog is 91%.

Group of orthologs #705. Best score 128 bits
Score difference with first non-orthologous sequence - P.pallidum:128 P.yoelii:128

D3BB72              	100.00%		Q7RFR5              	100.00%
Bootstrap support for D3BB72 as seed ortholog is 100%.
Bootstrap support for Q7RFR5 as seed ortholog is 100%.

Group of orthologs #706. Best score 127 bits
Score difference with first non-orthologous sequence - P.pallidum:127 P.yoelii:127

D3B1S8              	100.00%		Q7PDN3              	100.00%
Bootstrap support for D3B1S8 as seed ortholog is 100%.
Bootstrap support for Q7PDN3 as seed ortholog is 100%.

Group of orthologs #707. Best score 127 bits
Score difference with first non-orthologous sequence - P.pallidum:127 P.yoelii:127

D3B061              	100.00%		Q7RGT5              	100.00%
Bootstrap support for D3B061 as seed ortholog is 100%.
Bootstrap support for Q7RGT5 as seed ortholog is 100%.

Group of orthologs #708. Best score 127 bits
Score difference with first non-orthologous sequence - P.pallidum:127 P.yoelii:127

D3BQQ8              	100.00%		Q7RR20              	100.00%
Bootstrap support for D3BQQ8 as seed ortholog is 100%.
Bootstrap support for Q7RR20 as seed ortholog is 100%.

Group of orthologs #709. Best score 127 bits
Score difference with first non-orthologous sequence - P.pallidum:127 P.yoelii:127

D3BQU5              	100.00%		Q7RR03              	100.00%
Bootstrap support for D3BQU5 as seed ortholog is 100%.
Bootstrap support for Q7RR03 as seed ortholog is 100%.

Group of orthologs #710. Best score 126 bits
Score difference with first non-orthologous sequence - P.pallidum:126 P.yoelii:126

D3B1M9              	100.00%		Q7RTB3              	100.00%
D3B7B4              	100.00%		
Bootstrap support for D3B1M9 as seed ortholog is 100%.
Bootstrap support for D3B7B4 as seed ortholog is 100%.
Bootstrap support for Q7RTB3 as seed ortholog is 100%.

Group of orthologs #711. Best score 126 bits
Score difference with first non-orthologous sequence - P.pallidum:126 P.yoelii:126

D3BMI1              	100.00%		Q7RQM3              	100.00%
Bootstrap support for D3BMI1 as seed ortholog is 100%.
Bootstrap support for Q7RQM3 as seed ortholog is 100%.

Group of orthologs #712. Best score 126 bits
Score difference with first non-orthologous sequence - P.pallidum:126 P.yoelii:126

D3BSK0              	100.00%		Q7RKU7              	100.00%
Bootstrap support for D3BSK0 as seed ortholog is 100%.
Bootstrap support for Q7RKU7 as seed ortholog is 100%.

Group of orthologs #713. Best score 125 bits
Score difference with first non-orthologous sequence - P.pallidum:125 P.yoelii:125

D3B9R9              	100.00%		Q7RN19              	100.00%
D3BSC6              	5.70%		
Bootstrap support for D3B9R9 as seed ortholog is 100%.
Bootstrap support for Q7RN19 as seed ortholog is 100%.

Group of orthologs #714. Best score 125 bits
Score difference with first non-orthologous sequence - P.pallidum:125 P.yoelii:125

D3BGR2              	100.00%		Q7RDV5              	100.00%
Bootstrap support for D3BGR2 as seed ortholog is 100%.
Bootstrap support for Q7RDV5 as seed ortholog is 100%.

Group of orthologs #715. Best score 125 bits
Score difference with first non-orthologous sequence - P.pallidum:43 P.yoelii:125

D3BH70              	100.00%		Q7RKF5              	100.00%
Bootstrap support for D3BH70 as seed ortholog is 87%.
Bootstrap support for Q7RKF5 as seed ortholog is 100%.

Group of orthologs #716. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:124 P.yoelii:124

D3BDZ0              	100.00%		Q7PDK9              	100.00%
Bootstrap support for D3BDZ0 as seed ortholog is 100%.
Bootstrap support for Q7PDK9 as seed ortholog is 100%.

Group of orthologs #717. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:37 P.yoelii:78

D3AYE0              	100.00%		Q7RM64              	100.00%
Bootstrap support for D3AYE0 as seed ortholog is 84%.
Bootstrap support for Q7RM64 as seed ortholog is 88%.

Group of orthologs #718. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:124 P.yoelii:124

D3BM58              	100.00%		Q7RBW4              	100.00%
Bootstrap support for D3BM58 as seed ortholog is 100%.
Bootstrap support for Q7RBW4 as seed ortholog is 100%.

Group of orthologs #719. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:124 P.yoelii:124

D3BQD4              	100.00%		Q7RBE4              	100.00%
Bootstrap support for D3BQD4 as seed ortholog is 100%.
Bootstrap support for Q7RBE4 as seed ortholog is 100%.

Group of orthologs #720. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:124 P.yoelii:124

D3BLU5              	100.00%		Q7RN35              	100.00%
Bootstrap support for D3BLU5 as seed ortholog is 100%.
Bootstrap support for Q7RN35 as seed ortholog is 100%.

Group of orthologs #721. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:124 P.yoelii:124

D3BP66              	100.00%		Q7RRB4              	100.00%
Bootstrap support for D3BP66 as seed ortholog is 100%.
Bootstrap support for Q7RRB4 as seed ortholog is 100%.

Group of orthologs #722. Best score 124 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:20

D3BSQ1              	100.00%		Q7RQT1              	100.00%
Bootstrap support for D3BSQ1 as seed ortholog is 99%.
Bootstrap support for Q7RQT1 as seed ortholog is 80%.

Group of orthologs #723. Best score 123 bits
Score difference with first non-orthologous sequence - P.pallidum:17 P.yoelii:123

D3BIZ5              	100.00%		Q7RNT0              	100.00%
D3AVM4              	5.86%		
Bootstrap support for D3BIZ5 as seed ortholog is 74%.
Alternative seed ortholog is D3AXJ7 (17 bits away from this cluster)
Bootstrap support for Q7RNT0 as seed ortholog is 100%.

Group of orthologs #724. Best score 123 bits
Score difference with first non-orthologous sequence - P.pallidum:123 P.yoelii:123

D3B1R4              	100.00%		Q7RGH6              	100.00%
Bootstrap support for D3B1R4 as seed ortholog is 100%.
Bootstrap support for Q7RGH6 as seed ortholog is 100%.

Group of orthologs #725. Best score 123 bits
Score difference with first non-orthologous sequence - P.pallidum:123 P.yoelii:123

D3BE16              	100.00%		Q7RC70              	100.00%
Bootstrap support for D3BE16 as seed ortholog is 100%.
Bootstrap support for Q7RC70 as seed ortholog is 100%.

Group of orthologs #726. Best score 123 bits
Score difference with first non-orthologous sequence - P.pallidum:38 P.yoelii:123

D3BKL0              	100.00%		Q7RHR4              	100.00%
Bootstrap support for D3BKL0 as seed ortholog is 91%.
Bootstrap support for Q7RHR4 as seed ortholog is 100%.

Group of orthologs #727. Best score 123 bits
Score difference with first non-orthologous sequence - P.pallidum:123 P.yoelii:123

D3BSL2              	100.00%		Q7RJ02              	100.00%
Bootstrap support for D3BSL2 as seed ortholog is 100%.
Bootstrap support for Q7RJ02 as seed ortholog is 100%.

Group of orthologs #728. Best score 123 bits
Score difference with first non-orthologous sequence - P.pallidum:22 P.yoelii:53

D3BUR4              	100.00%		Q7RMU4              	100.00%
Bootstrap support for D3BUR4 as seed ortholog is 73%.
Alternative seed ortholog is D3AVN2 (22 bits away from this cluster)
Bootstrap support for Q7RMU4 as seed ortholog is 97%.

Group of orthologs #729. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:122 P.yoelii:122

D3B7G1              	100.00%		Q7RCH9              	100.00%
D3B3N7              	30.92%		
Bootstrap support for D3B7G1 as seed ortholog is 100%.
Bootstrap support for Q7RCH9 as seed ortholog is 100%.

Group of orthologs #730. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:122 P.yoelii:122

D3AXK2              	100.00%		Q7RF93              	100.00%
Bootstrap support for D3AXK2 as seed ortholog is 100%.
Bootstrap support for Q7RF93 as seed ortholog is 100%.

Group of orthologs #731. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:122 P.yoelii:43

D3B0E6              	100.00%		Q7RDJ2              	100.00%
Bootstrap support for D3B0E6 as seed ortholog is 100%.
Bootstrap support for Q7RDJ2 as seed ortholog is 97%.

Group of orthologs #732. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:122 P.yoelii:122

D3B2G1              	100.00%		Q7RDU4              	100.00%
Bootstrap support for D3B2G1 as seed ortholog is 100%.
Bootstrap support for Q7RDU4 as seed ortholog is 100%.

Group of orthologs #733. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:122 P.yoelii:122

D3B5S8              	100.00%		Q7REK3              	100.00%
Bootstrap support for D3B5S8 as seed ortholog is 100%.
Bootstrap support for Q7REK3 as seed ortholog is 100%.

Group of orthologs #734. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:122 P.yoelii:122

D3BF17              	100.00%		Q7RGF4              	100.00%
Bootstrap support for D3BF17 as seed ortholog is 100%.
Bootstrap support for Q7RGF4 as seed ortholog is 100%.

Group of orthologs #735. Best score 122 bits
Score difference with first non-orthologous sequence - P.pallidum:31 P.yoelii:122

D3BKH8              	100.00%		Q7RQR6              	100.00%
Bootstrap support for D3BKH8 as seed ortholog is 70%.
Alternative seed ortholog is D3BKA3 (31 bits away from this cluster)
Bootstrap support for Q7RQR6 as seed ortholog is 100%.

Group of orthologs #736. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:59 P.yoelii:121

D3B3D4              	100.00%		Q7RDD0              	100.00%
Bootstrap support for D3B3D4 as seed ortholog is 96%.
Bootstrap support for Q7RDD0 as seed ortholog is 100%.

Group of orthologs #737. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:121

D3BC65              	100.00%		Q7R971              	100.00%
Bootstrap support for D3BC65 as seed ortholog is 100%.
Bootstrap support for Q7R971 as seed ortholog is 100%.

Group of orthologs #738. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:121

D3AVZ9              	100.00%		Q7RRG6              	100.00%
Bootstrap support for D3AVZ9 as seed ortholog is 100%.
Bootstrap support for Q7RRG6 as seed ortholog is 100%.

Group of orthologs #739. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:28 P.yoelii:121

D3BAR7              	100.00%		Q7RHC8              	100.00%
Bootstrap support for D3BAR7 as seed ortholog is 86%.
Bootstrap support for Q7RHC8 as seed ortholog is 100%.

Group of orthologs #740. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:121

D3BL88              	100.00%		Q7R967              	100.00%
Bootstrap support for D3BL88 as seed ortholog is 100%.
Bootstrap support for Q7R967 as seed ortholog is 100%.

Group of orthologs #741. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:121

D3BCJ7              	100.00%		Q7RHZ4              	100.00%
Bootstrap support for D3BCJ7 as seed ortholog is 100%.
Bootstrap support for Q7RHZ4 as seed ortholog is 100%.

Group of orthologs #742. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:121

D3BIY8              	100.00%		Q7RE07              	100.00%
Bootstrap support for D3BIY8 as seed ortholog is 100%.
Bootstrap support for Q7RE07 as seed ortholog is 100%.

Group of orthologs #743. Best score 121 bits
Score difference with first non-orthologous sequence - P.pallidum:121 P.yoelii:121

D3BM05              	100.00%		Q7RIF2              	100.00%
Bootstrap support for D3BM05 as seed ortholog is 100%.
Bootstrap support for Q7RIF2 as seed ortholog is 100%.

Group of orthologs #744. Best score 120 bits
Score difference with first non-orthologous sequence - P.pallidum:64 P.yoelii:120

D3AXI5              	100.00%		Q7RHX0              	100.00%
Bootstrap support for D3AXI5 as seed ortholog is 96%.
Bootstrap support for Q7RHX0 as seed ortholog is 100%.

Group of orthologs #745. Best score 120 bits
Score difference with first non-orthologous sequence - P.pallidum:59 P.yoelii:120

D3B1A8              	100.00%		Q7RH03              	100.00%
Bootstrap support for D3B1A8 as seed ortholog is 97%.
Bootstrap support for Q7RH03 as seed ortholog is 100%.

Group of orthologs #746. Best score 120 bits
Score difference with first non-orthologous sequence - P.pallidum:120 P.yoelii:36

D3B081              	100.00%		Q7RLT7              	100.00%
Bootstrap support for D3B081 as seed ortholog is 100%.
Bootstrap support for Q7RLT7 as seed ortholog is 82%.

Group of orthologs #747. Best score 120 bits
Score difference with first non-orthologous sequence - P.pallidum:120 P.yoelii:120

D3BNU2              	100.00%		Q7RM81              	100.00%
Bootstrap support for D3BNU2 as seed ortholog is 100%.
Bootstrap support for Q7RM81 as seed ortholog is 100%.

Group of orthologs #748. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 P.yoelii:119

D3B3T2              	100.00%		Q7RSX2              	100.00%
D3BKY3              	25.65%		
D3B9P3              	12.47%		
Bootstrap support for D3B3T2 as seed ortholog is 100%.
Bootstrap support for Q7RSX2 as seed ortholog is 100%.

Group of orthologs #749. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 P.yoelii:119

D3BH99              	100.00%		Q7RRW1              	100.00%
D3B1C3              	17.19%		
Bootstrap support for D3BH99 as seed ortholog is 100%.
Bootstrap support for Q7RRW1 as seed ortholog is 100%.

Group of orthologs #750. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 P.yoelii:119

D3B3B6              	100.00%		Q7R8A0              	100.00%
Bootstrap support for D3B3B6 as seed ortholog is 100%.
Bootstrap support for Q7R8A0 as seed ortholog is 100%.

Group of orthologs #751. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 P.yoelii:119

D3B2R4              	100.00%		Q7RMS6              	100.00%
Bootstrap support for D3B2R4 as seed ortholog is 100%.
Bootstrap support for Q7RMS6 as seed ortholog is 100%.

Group of orthologs #752. Best score 119 bits
Score difference with first non-orthologous sequence - P.pallidum:119 P.yoelii:119

D3BBQ4              	100.00%		Q7RFJ4              	100.00%
Bootstrap support for D3BBQ4 as seed ortholog is 100%.
Bootstrap support for Q7RFJ4 as seed ortholog is 100%.

Group of orthologs #753. Best score 118 bits
Score difference with first non-orthologous sequence - P.pallidum:118 P.yoelii:118

D3B477              	100.00%		Q7RH72              	100.00%
Bootstrap support for D3B477 as seed ortholog is 100%.
Bootstrap support for Q7RH72 as seed ortholog is 100%.

Group of orthologs #754. Best score 118 bits
Score difference with first non-orthologous sequence - P.pallidum:58 P.yoelii:118

D3AX98              	100.00%		Q7RRZ7              	100.00%
Bootstrap support for D3AX98 as seed ortholog is 99%.
Bootstrap support for Q7RRZ7 as seed ortholog is 100%.

Group of orthologs #755. Best score 118 bits
Score difference with first non-orthologous sequence - P.pallidum:118 P.yoelii:118

D3B963              	100.00%		Q7RHT3              	100.00%
Bootstrap support for D3B963 as seed ortholog is 100%.
Bootstrap support for Q7RHT3 as seed ortholog is 100%.

Group of orthologs #756. Best score 118 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:118

D3BB06              	100.00%		Q7RT72              	100.00%
Bootstrap support for D3BB06 as seed ortholog is 99%.
Bootstrap support for Q7RT72 as seed ortholog is 100%.

Group of orthologs #757. Best score 117 bits
Score difference with first non-orthologous sequence - P.pallidum:117 P.yoelii:117

D3B7X1              	100.00%		Q7R8D5              	100.00%
D3B519              	14.14%		
D3AYH8              	13.50%		
D3BPN8              	6.43%		
Bootstrap support for D3B7X1 as seed ortholog is 100%.
Bootstrap support for Q7R8D5 as seed ortholog is 100%.

Group of orthologs #758. Best score 117 bits
Score difference with first non-orthologous sequence - P.pallidum:117 P.yoelii:117

D3AYE5              	100.00%		Q7RD46              	100.00%
Bootstrap support for D3AYE5 as seed ortholog is 100%.
Bootstrap support for Q7RD46 as seed ortholog is 100%.

Group of orthologs #759. Best score 117 bits
Score difference with first non-orthologous sequence - P.pallidum:117 P.yoelii:117

D3BEI2              	100.00%		Q7RQG3              	100.00%
Bootstrap support for D3BEI2 as seed ortholog is 100%.
Bootstrap support for Q7RQG3 as seed ortholog is 100%.

Group of orthologs #760. Best score 117 bits
Score difference with first non-orthologous sequence - P.pallidum:117 P.yoelii:117

D3BTW0              	100.00%		Q7REC3              	100.00%
Bootstrap support for D3BTW0 as seed ortholog is 100%.
Bootstrap support for Q7REC3 as seed ortholog is 100%.

Group of orthologs #761. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:24 P.yoelii:40

D3B0Q7              	100.00%		Q7RGJ9              	100.00%
                    	       		Q7RP02              	6.80%
Bootstrap support for D3B0Q7 as seed ortholog is 70%.
Alternative seed ortholog is D3BT83 (24 bits away from this cluster)
Bootstrap support for Q7RGJ9 as seed ortholog is 97%.

Group of orthologs #762. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:116 P.yoelii:116

D3AWE0              	100.00%		Q7RST3              	100.00%
Bootstrap support for D3AWE0 as seed ortholog is 100%.
Bootstrap support for Q7RST3 as seed ortholog is 100%.

Group of orthologs #763. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:116 P.yoelii:116

D3BIL1              	100.00%		Q7RAQ3              	100.00%
Bootstrap support for D3BIL1 as seed ortholog is 100%.
Bootstrap support for Q7RAQ3 as seed ortholog is 100%.

Group of orthologs #764. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:116 P.yoelii:116

D3BAX9              	100.00%		Q7RT41              	100.00%
Bootstrap support for D3BAX9 as seed ortholog is 100%.
Bootstrap support for Q7RT41 as seed ortholog is 100%.

Group of orthologs #765. Best score 116 bits
Score difference with first non-orthologous sequence - P.pallidum:116 P.yoelii:116

D3BM67              	100.00%		Q7RJW3              	100.00%
Bootstrap support for D3BM67 as seed ortholog is 100%.
Bootstrap support for Q7RJW3 as seed ortholog is 100%.

Group of orthologs #766. Best score 115 bits
Score difference with first non-orthologous sequence - P.pallidum:115 P.yoelii:115

D3BLR1              	100.00%		Q7RHV7              	100.00%
Bootstrap support for D3BLR1 as seed ortholog is 100%.
Bootstrap support for Q7RHV7 as seed ortholog is 100%.

Group of orthologs #767. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3B6C3              	100.00%		Q7PDV9              	100.00%
D3BA25              	8.01%		
Bootstrap support for D3B6C3 as seed ortholog is 100%.
Bootstrap support for Q7PDV9 as seed ortholog is 100%.

Group of orthologs #768. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3AWF4              	100.00%		Q7REA0              	100.00%
Bootstrap support for D3AWF4 as seed ortholog is 100%.
Bootstrap support for Q7REA0 as seed ortholog is 100%.

Group of orthologs #769. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:48 P.yoelii:114

D3B645              	100.00%		Q7RL87              	100.00%
Bootstrap support for D3B645 as seed ortholog is 90%.
Bootstrap support for Q7RL87 as seed ortholog is 100%.

Group of orthologs #770. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3BIZ2              	100.00%		Q7RBD0              	100.00%
Bootstrap support for D3BIZ2 as seed ortholog is 100%.
Bootstrap support for Q7RBD0 as seed ortholog is 100%.

Group of orthologs #771. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3B8Q0              	100.00%		Q7RN67              	100.00%
Bootstrap support for D3B8Q0 as seed ortholog is 100%.
Bootstrap support for Q7RN67 as seed ortholog is 100%.

Group of orthologs #772. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3B9Y5              	100.00%		Q7RQZ4              	100.00%
Bootstrap support for D3B9Y5 as seed ortholog is 100%.
Bootstrap support for Q7RQZ4 as seed ortholog is 100%.

Group of orthologs #773. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:53 P.yoelii:67

D3BR70              	100.00%		Q7RC98              	100.00%
Bootstrap support for D3BR70 as seed ortholog is 98%.
Bootstrap support for Q7RC98 as seed ortholog is 99%.

Group of orthologs #774. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3BLH6              	100.00%		Q7RHU5              	100.00%
Bootstrap support for D3BLH6 as seed ortholog is 100%.
Bootstrap support for Q7RHU5 as seed ortholog is 100%.

Group of orthologs #775. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:114 P.yoelii:114

D3BK15              	100.00%		Q7RKN4              	100.00%
Bootstrap support for D3BK15 as seed ortholog is 100%.
Bootstrap support for Q7RKN4 as seed ortholog is 100%.

Group of orthologs #776. Best score 114 bits
Score difference with first non-orthologous sequence - P.pallidum:44 P.yoelii:114

D3BUZ0              	100.00%		Q7RJE8              	100.00%
Bootstrap support for D3BUZ0 as seed ortholog is 95%.
Bootstrap support for Q7RJE8 as seed ortholog is 100%.

Group of orthologs #777. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3B7E6              	100.00%		Q7PDT2              	100.00%
D3B3H3              	11.23%		Q7PDP4              	11.03%
                    	       		Q7RNG1              	5.52%
Bootstrap support for D3B7E6 as seed ortholog is 100%.
Bootstrap support for Q7PDT2 as seed ortholog is 100%.

Group of orthologs #778. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3AY36              	100.00%		Q7R7W0              	100.00%
Bootstrap support for D3AY36 as seed ortholog is 100%.
Bootstrap support for Q7R7W0 as seed ortholog is 100%.

Group of orthologs #779. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3AY37              	100.00%		Q7RIB4              	100.00%
Bootstrap support for D3AY37 as seed ortholog is 100%.
Bootstrap support for Q7RIB4 as seed ortholog is 100%.

Group of orthologs #780. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3BL72              	100.00%		Q7R7Y6              	100.00%
Bootstrap support for D3BL72 as seed ortholog is 100%.
Bootstrap support for Q7R7Y6 as seed ortholog is 100%.

Group of orthologs #781. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3B6B5              	100.00%		Q7RSD3              	100.00%
Bootstrap support for D3B6B5 as seed ortholog is 100%.
Bootstrap support for Q7RSD3 as seed ortholog is 100%.

Group of orthologs #782. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3BTS9              	100.00%		Q7R8I3              	100.00%
Bootstrap support for D3BTS9 as seed ortholog is 100%.
Bootstrap support for Q7R8I3 as seed ortholog is 100%.

Group of orthologs #783. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:113 P.yoelii:113

D3BKF7              	100.00%		Q7RNB3              	100.00%
Bootstrap support for D3BKF7 as seed ortholog is 100%.
Bootstrap support for Q7RNB3 as seed ortholog is 100%.

Group of orthologs #784. Best score 113 bits
Score difference with first non-orthologous sequence - P.pallidum:51 P.yoelii:113

D3BTN8              	100.00%		Q7RPG8              	100.00%
Bootstrap support for D3BTN8 as seed ortholog is 98%.
Bootstrap support for Q7RPG8 as seed ortholog is 100%.

Group of orthologs #785. Best score 112 bits
Score difference with first non-orthologous sequence - P.pallidum:112 P.yoelii:112

D3B4Z7              	100.00%		Q7RJT2              	100.00%
Bootstrap support for D3B4Z7 as seed ortholog is 100%.
Bootstrap support for Q7RJT2 as seed ortholog is 100%.

Group of orthologs #786. Best score 112 bits
Score difference with first non-orthologous sequence - P.pallidum:112 P.yoelii:112

D3BM86              	100.00%		Q7RBD1              	100.00%
Bootstrap support for D3BM86 as seed ortholog is 100%.
Bootstrap support for Q7RBD1 as seed ortholog is 100%.

Group of orthologs #787. Best score 112 bits
Score difference with first non-orthologous sequence - P.pallidum:112 P.yoelii:112

D3BMU4              	100.00%		Q7RLD8              	100.00%
Bootstrap support for D3BMU4 as seed ortholog is 100%.
Bootstrap support for Q7RLD8 as seed ortholog is 100%.

Group of orthologs #788. Best score 112 bits
Score difference with first non-orthologous sequence - P.pallidum:112 P.yoelii:112

D3BU56              	100.00%		Q7RN10              	100.00%
Bootstrap support for D3BU56 as seed ortholog is 100%.
Bootstrap support for Q7RN10 as seed ortholog is 100%.

Group of orthologs #789. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3B388              	100.00%		Q7PDS4              	100.00%
D3BBL3              	100.00%		
D3AYB9              	14.20%		
D3BN96              	5.80%		
Bootstrap support for D3B388 as seed ortholog is 100%.
Bootstrap support for D3BBL3 as seed ortholog is 100%.
Bootstrap support for Q7PDS4 as seed ortholog is 100%.

Group of orthologs #790. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3BD80              	100.00%		Q7RCM3              	100.00%
Bootstrap support for D3BD80 as seed ortholog is 100%.
Bootstrap support for Q7RCM3 as seed ortholog is 100%.

Group of orthologs #791. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3BPL5              	100.00%		Q7R9B3              	100.00%
Bootstrap support for D3BPL5 as seed ortholog is 100%.
Bootstrap support for Q7R9B3 as seed ortholog is 100%.

Group of orthologs #792. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:35 P.yoelii:111

D3BGA4              	100.00%		Q7RQJ1              	100.00%
Bootstrap support for D3BGA4 as seed ortholog is 79%.
Bootstrap support for Q7RQJ1 as seed ortholog is 100%.

Group of orthologs #793. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3BTM8              	100.00%		Q7REI8              	100.00%
Bootstrap support for D3BTM8 as seed ortholog is 100%.
Bootstrap support for Q7REI8 as seed ortholog is 100%.

Group of orthologs #794. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:25 P.yoelii:111

D3BIW1              	100.00%		Q7RTG2              	100.00%
Bootstrap support for D3BIW1 as seed ortholog is 75%.
Bootstrap support for Q7RTG2 as seed ortholog is 100%.

Group of orthologs #795. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3BUI7              	100.00%		Q7RLG3              	100.00%
Bootstrap support for D3BUI7 as seed ortholog is 100%.
Bootstrap support for Q7RLG3 as seed ortholog is 100%.

Group of orthologs #796. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3BU74              	100.00%		Q7RLY5              	100.00%
Bootstrap support for D3BU74 as seed ortholog is 100%.
Bootstrap support for Q7RLY5 as seed ortholog is 100%.

Group of orthologs #797. Best score 111 bits
Score difference with first non-orthologous sequence - P.pallidum:111 P.yoelii:111

D3BSZ7              	100.00%		Q7RP51              	100.00%
Bootstrap support for D3BSZ7 as seed ortholog is 100%.
Bootstrap support for Q7RP51 as seed ortholog is 100%.

Group of orthologs #798. Best score 110 bits
Score difference with first non-orthologous sequence - P.pallidum:110 P.yoelii:110

D3AWW4              	100.00%		Q7RG97              	100.00%
Bootstrap support for D3AWW4 as seed ortholog is 100%.
Bootstrap support for Q7RG97 as seed ortholog is 100%.

Group of orthologs #799. Best score 110 bits
Score difference with first non-orthologous sequence - P.pallidum:110 P.yoelii:110

D3BEZ0              	100.00%		Q7RH21              	100.00%
Bootstrap support for D3BEZ0 as seed ortholog is 100%.
Bootstrap support for Q7RH21 as seed ortholog is 100%.

Group of orthologs #800. Best score 109 bits
Score difference with first non-orthologous sequence - P.pallidum:109 P.yoelii:109

D3BS60              	100.00%		Q7RD80              	100.00%
D3BHG8              	17.25%		
D3B2D7              	6.96%		
Bootstrap support for D3BS60 as seed ortholog is 100%.
Bootstrap support for Q7RD80 as seed ortholog is 100%.

Group of orthologs #801. Best score 109 bits
Score difference with first non-orthologous sequence - P.pallidum:109 P.yoelii:109

D3AZ65              	100.00%		Q7RAU6              	100.00%
Bootstrap support for D3AZ65 as seed ortholog is 100%.
Bootstrap support for Q7RAU6 as seed ortholog is 100%.

Group of orthologs #802. Best score 109 bits
Score difference with first non-orthologous sequence - P.pallidum:21 P.yoelii:109

D3B5A5              	100.00%		Q7R8L5              	100.00%
Bootstrap support for D3B5A5 as seed ortholog is 77%.
Bootstrap support for Q7R8L5 as seed ortholog is 100%.

Group of orthologs #803. Best score 108 bits
Score difference with first non-orthologous sequence - P.pallidum:108 P.yoelii:108

D3B044              	100.00%		Q7RG60              	100.00%
Bootstrap support for D3B044 as seed ortholog is 100%.
Bootstrap support for Q7RG60 as seed ortholog is 100%.

Group of orthologs #804. Best score 108 bits
Score difference with first non-orthologous sequence - P.pallidum:108 P.yoelii:108

D3BNG5              	100.00%		Q7RGP7              	100.00%
Bootstrap support for D3BNG5 as seed ortholog is 100%.
Bootstrap support for Q7RGP7 as seed ortholog is 100%.

Group of orthologs #805. Best score 107 bits
Score difference with first non-orthologous sequence - P.pallidum:25 P.yoelii:107

D3BJ21              	100.00%		Q7RAA5              	100.00%
Bootstrap support for D3BJ21 as seed ortholog is 91%.
Bootstrap support for Q7RAA5 as seed ortholog is 100%.

Group of orthologs #806. Best score 107 bits
Score difference with first non-orthologous sequence - P.pallidum:107 P.yoelii:107

D3B8H0              	100.00%		Q7RMT0              	100.00%
Bootstrap support for D3B8H0 as seed ortholog is 100%.
Bootstrap support for Q7RMT0 as seed ortholog is 100%.

Group of orthologs #807. Best score 107 bits
Score difference with first non-orthologous sequence - P.pallidum:107 P.yoelii:107

D3BJY9              	100.00%		Q7RGK8              	100.00%
Bootstrap support for D3BJY9 as seed ortholog is 100%.
Bootstrap support for Q7RGK8 as seed ortholog is 100%.

Group of orthologs #808. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:106

D3AZY2              	100.00%		Q7RN65              	100.00%
Bootstrap support for D3AZY2 as seed ortholog is 100%.
Bootstrap support for Q7RN65 as seed ortholog is 100%.

Group of orthologs #809. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:106

D3AWF3              	100.00%		Q7RT63              	100.00%
Bootstrap support for D3AWF3 as seed ortholog is 100%.
Bootstrap support for Q7RT63 as seed ortholog is 100%.

Group of orthologs #810. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:106

D3BLY5              	100.00%		Q7RDA3              	100.00%
Bootstrap support for D3BLY5 as seed ortholog is 100%.
Bootstrap support for Q7RDA3 as seed ortholog is 100%.

Group of orthologs #811. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:106

D3BTD4              	100.00%		Q7R8Z2              	100.00%
Bootstrap support for D3BTD4 as seed ortholog is 100%.
Bootstrap support for Q7R8Z2 as seed ortholog is 100%.

Group of orthologs #812. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:40

D3BGC8              	100.00%		Q7RPZ7              	100.00%
Bootstrap support for D3BGC8 as seed ortholog is 100%.
Bootstrap support for Q7RPZ7 as seed ortholog is 79%.

Group of orthologs #813. Best score 106 bits
Score difference with first non-orthologous sequence - P.pallidum:106 P.yoelii:106

D3BNR4              	100.00%		Q7RRD6              	100.00%
Bootstrap support for D3BNR4 as seed ortholog is 100%.
Bootstrap support for Q7RRD6 as seed ortholog is 100%.

Group of orthologs #814. Best score 105 bits
Score difference with first non-orthologous sequence - P.pallidum:11 P.yoelii:105

D3B8K6              	100.00%		Q7RJZ9              	100.00%
Bootstrap support for D3B8K6 as seed ortholog is 63%.
Alternative seed ortholog is D3B9Q4 (11 bits away from this cluster)
Bootstrap support for Q7RJZ9 as seed ortholog is 100%.

Group of orthologs #815. Best score 105 bits
Score difference with first non-orthologous sequence - P.pallidum:105 P.yoelii:105

D3BE05              	100.00%		Q7RGI5              	100.00%
Bootstrap support for D3BE05 as seed ortholog is 100%.
Bootstrap support for Q7RGI5 as seed ortholog is 100%.

Group of orthologs #816. Best score 104 bits
Score difference with first non-orthologous sequence - P.pallidum:104 P.yoelii:34

D3B1V3              	100.00%		Q7R780              	100.00%
Bootstrap support for D3B1V3 as seed ortholog is 100%.
Bootstrap support for Q7R780 as seed ortholog is 93%.

Group of orthologs #817. Best score 104 bits
Score difference with first non-orthologous sequence - P.pallidum:18 P.yoelii:104

D3B9C0              	100.00%		Q7RBK8              	100.00%
Bootstrap support for D3B9C0 as seed ortholog is 69%.
Alternative seed ortholog is D3BCK9 (18 bits away from this cluster)
Bootstrap support for Q7RBK8 as seed ortholog is 100%.

Group of orthologs #818. Best score 104 bits
Score difference with first non-orthologous sequence - P.pallidum:104 P.yoelii:104

D3B544              	100.00%		Q7RGI4              	100.00%
Bootstrap support for D3B544 as seed ortholog is 100%.
Bootstrap support for Q7RGI4 as seed ortholog is 100%.

Group of orthologs #819. Best score 103 bits
Score difference with first non-orthologous sequence - P.pallidum:19 P.yoelii:103

D3AX86              	100.00%		Q7RQ86              	100.00%
Bootstrap support for D3AX86 as seed ortholog is 68%.
Alternative seed ortholog is D3AY51 (19 bits away from this cluster)
Bootstrap support for Q7RQ86 as seed ortholog is 100%.

Group of orthologs #820. Best score 103 bits
Score difference with first non-orthologous sequence - P.pallidum:35 P.yoelii:103

D3BBZ9              	100.00%		Q7RP28              	100.00%
Bootstrap support for D3BBZ9 as seed ortholog is 77%.
Bootstrap support for Q7RP28 as seed ortholog is 100%.

Group of orthologs #821. Best score 103 bits
Score difference with first non-orthologous sequence - P.pallidum:103 P.yoelii:103

D3BNV1              	100.00%		Q7RDD2              	100.00%
Bootstrap support for D3BNV1 as seed ortholog is 100%.
Bootstrap support for Q7RDD2 as seed ortholog is 100%.

Group of orthologs #822. Best score 103 bits
Score difference with first non-orthologous sequence - P.pallidum:103 P.yoelii:103

D3BQZ1              	100.00%		Q7RQZ0              	100.00%
Bootstrap support for D3BQZ1 as seed ortholog is 100%.
Bootstrap support for Q7RQZ0 as seed ortholog is 100%.

Group of orthologs #823. Best score 102 bits
Score difference with first non-orthologous sequence - P.pallidum:102 P.yoelii:58

D3BN30              	100.00%		Q7R6W6              	100.00%
Bootstrap support for D3BN30 as seed ortholog is 100%.
Bootstrap support for Q7R6W6 as seed ortholog is 83%.

Group of orthologs #824. Best score 101 bits
Score difference with first non-orthologous sequence - P.pallidum:101 P.yoelii:101

D3B3T7              	100.00%		Q7REH6              	100.00%
D3B3T6              	81.19%		
D3BAR5              	40.92%		
D3BNP5              	35.31%		
D3AZ39              	24.75%		
D3BUQ5              	24.42%		
D3BPF4              	20.79%		
D3BMF7              	18.48%		
D3BAJ2              	14.85%		
D3BKS3              	14.52%		
D3BKW9              	14.52%		
D3BMJ1              	13.86%		
D3BFL6              	12.87%		
D3BB48              	12.21%		
D3BRI5              	11.88%		
D3BKN3              	11.55%		
D3B9X4              	11.22%		
D3BFT4              	9.24%		
D3BBY4              	8.58%		
D3BSL8              	5.61%		
Bootstrap support for D3B3T7 as seed ortholog is 100%.
Bootstrap support for Q7REH6 as seed ortholog is 100%.

Group of orthologs #825. Best score 101 bits
Score difference with first non-orthologous sequence - P.pallidum:101 P.yoelii:101

D3B1K7              	100.00%		Q7RSM3              	100.00%
Bootstrap support for D3B1K7 as seed ortholog is 100%.
Bootstrap support for Q7RSM3 as seed ortholog is 100%.

Group of orthologs #826. Best score 101 bits
Score difference with first non-orthologous sequence - P.pallidum:101 P.yoelii:101

D3BP72              	100.00%		Q7RJV3              	100.00%
Bootstrap support for D3BP72 as seed ortholog is 100%.
Bootstrap support for Q7RJV3 as seed ortholog is 100%.

Group of orthologs #827. Best score 101 bits
Score difference with first non-orthologous sequence - P.pallidum:101 P.yoelii:101

D3BUG2              	100.00%		Q7RF49              	100.00%
Bootstrap support for D3BUG2 as seed ortholog is 100%.
Bootstrap support for Q7RF49 as seed ortholog is 100%.

Group of orthologs #828. Best score 101 bits
Score difference with first non-orthologous sequence - P.pallidum:101 P.yoelii:101

D3BTV9              	100.00%		Q7RHC7              	100.00%
Bootstrap support for D3BTV9 as seed ortholog is 100%.
Bootstrap support for Q7RHC7 as seed ortholog is 100%.

Group of orthologs #829. Best score 101 bits
Score difference with first non-orthologous sequence - P.pallidum:101 P.yoelii:101

D3BPW7              	100.00%		Q7RMM3              	100.00%
Bootstrap support for D3BPW7 as seed ortholog is 100%.
Bootstrap support for Q7RMM3 as seed ortholog is 100%.

Group of orthologs #830. Best score 100 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:100

D3B760              	100.00%		Q7RFT0              	100.00%
Bootstrap support for D3B760 as seed ortholog is 100%.
Bootstrap support for Q7RFT0 as seed ortholog is 100%.

Group of orthologs #831. Best score 100 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:100

D3AYN0              	100.00%		Q7RRZ6              	100.00%
Bootstrap support for D3AYN0 as seed ortholog is 100%.
Bootstrap support for Q7RRZ6 as seed ortholog is 100%.

Group of orthologs #832. Best score 100 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:100

D3B0P9              	100.00%		Q7RT40              	100.00%
Bootstrap support for D3B0P9 as seed ortholog is 100%.
Bootstrap support for Q7RT40 as seed ortholog is 100%.

Group of orthologs #833. Best score 100 bits
Score difference with first non-orthologous sequence - P.pallidum:100 P.yoelii:100

D3BPE9              	100.00%		Q7RSM2              	100.00%
Bootstrap support for D3BPE9 as seed ortholog is 100%.
Bootstrap support for Q7RSM2 as seed ortholog is 100%.

Group of orthologs #834. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:5 P.yoelii:99

D3B1E5              	100.00%		Q7RC02              	100.00%
Bootstrap support for D3B1E5 as seed ortholog is 70%.
Alternative seed ortholog is D3BI79 (5 bits away from this cluster)
Bootstrap support for Q7RC02 as seed ortholog is 100%.

Group of orthologs #835. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:99

D3BQT7              	100.00%		Q7PDJ9              	100.00%
Bootstrap support for D3BQT7 as seed ortholog is 100%.
Bootstrap support for Q7PDJ9 as seed ortholog is 100%.

Group of orthologs #836. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:99

D3BVL2              	100.00%		Q7PDR2              	100.00%
Bootstrap support for D3BVL2 as seed ortholog is 100%.
Bootstrap support for Q7PDR2 as seed ortholog is 100%.

Group of orthologs #837. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:99

D3BUT5              	100.00%		Q7RCP1              	100.00%
Bootstrap support for D3BUT5 as seed ortholog is 100%.
Bootstrap support for Q7RCP1 as seed ortholog is 100%.

Group of orthologs #838. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:99

D3BR47              	100.00%		Q7RHT1              	100.00%
Bootstrap support for D3BR47 as seed ortholog is 100%.
Bootstrap support for Q7RHT1 as seed ortholog is 100%.

Group of orthologs #839. Best score 99 bits
Score difference with first non-orthologous sequence - P.pallidum:99 P.yoelii:99

D3BU92              	100.00%		Q7RFH8              	100.00%
Bootstrap support for D3BU92 as seed ortholog is 100%.
Bootstrap support for Q7RFH8 as seed ortholog is 100%.

Group of orthologs #840. Best score 98 bits
Score difference with first non-orthologous sequence - P.pallidum:98 P.yoelii:98

D3B201              	100.00%		Q7RK43              	100.00%
D3BPA0              	13.82%		
Bootstrap support for D3B201 as seed ortholog is 100%.
Bootstrap support for Q7RK43 as seed ortholog is 100%.

Group of orthologs #841. Best score 98 bits
Score difference with first non-orthologous sequence - P.pallidum:98 P.yoelii:98

D3BSC3              	100.00%		Q7RNQ8              	100.00%
D3BHA2              	6.34%		
Bootstrap support for D3BSC3 as seed ortholog is 100%.
Bootstrap support for Q7RNQ8 as seed ortholog is 100%.

Group of orthologs #842. Best score 98 bits
Score difference with first non-orthologous sequence - P.pallidum:98 P.yoelii:98

D3BK19              	100.00%		Q7RKA7              	100.00%
Bootstrap support for D3BK19 as seed ortholog is 100%.
Bootstrap support for Q7RKA7 as seed ortholog is 100%.

Group of orthologs #843. Best score 98 bits
Score difference with first non-orthologous sequence - P.pallidum:98 P.yoelii:98

D3BIF0              	100.00%		Q7RTH6              	100.00%
Bootstrap support for D3BIF0 as seed ortholog is 100%.
Bootstrap support for Q7RTH6 as seed ortholog is 100%.

Group of orthologs #844. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3AY02              	100.00%		Q7RDF3              	100.00%
Bootstrap support for D3AY02 as seed ortholog is 100%.
Bootstrap support for Q7RDF3 as seed ortholog is 100%.

Group of orthologs #845. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3B1P5              	100.00%		Q7RE91              	100.00%
Bootstrap support for D3B1P5 as seed ortholog is 100%.
Bootstrap support for Q7RE91 as seed ortholog is 100%.

Group of orthologs #846. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3B763              	100.00%		Q7R9P9              	100.00%
Bootstrap support for D3B763 as seed ortholog is 100%.
Bootstrap support for Q7R9P9 as seed ortholog is 100%.

Group of orthologs #847. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3B6P4              	100.00%		Q7RIE0              	100.00%
Bootstrap support for D3B6P4 as seed ortholog is 100%.
Bootstrap support for Q7RIE0 as seed ortholog is 100%.

Group of orthologs #848. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3B4D7              	100.00%		Q7RPM7              	100.00%
Bootstrap support for D3B4D7 as seed ortholog is 100%.
Bootstrap support for Q7RPM7 as seed ortholog is 100%.

Group of orthologs #849. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3BCK2              	100.00%		Q7RPA5              	100.00%
Bootstrap support for D3BCK2 as seed ortholog is 100%.
Bootstrap support for Q7RPA5 as seed ortholog is 100%.

Group of orthologs #850. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3BEM8              	100.00%		Q7RNT9              	100.00%
Bootstrap support for D3BEM8 as seed ortholog is 100%.
Bootstrap support for Q7RNT9 as seed ortholog is 100%.

Group of orthologs #851. Best score 97 bits
Score difference with first non-orthologous sequence - P.pallidum:97 P.yoelii:97

D3BM84              	100.00%		Q7RIP0              	100.00%
Bootstrap support for D3BM84 as seed ortholog is 100%.
Bootstrap support for Q7RIP0 as seed ortholog is 100%.

Group of orthologs #852. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 P.yoelii:96

D3AVK6              	100.00%		Q7RPV6              	100.00%
Bootstrap support for D3AVK6 as seed ortholog is 100%.
Bootstrap support for Q7RPV6 as seed ortholog is 100%.

Group of orthologs #853. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 P.yoelii:96

D3AXF9              	100.00%		Q7RPN0              	100.00%
Bootstrap support for D3AXF9 as seed ortholog is 100%.
Bootstrap support for Q7RPN0 as seed ortholog is 100%.

Group of orthologs #854. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 P.yoelii:96

D3B3U3              	100.00%		Q7RLA9              	100.00%
Bootstrap support for D3B3U3 as seed ortholog is 100%.
Bootstrap support for Q7RLA9 as seed ortholog is 100%.

Group of orthologs #855. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 P.yoelii:96

D3B6V9              	100.00%		Q7RM03              	100.00%
Bootstrap support for D3B6V9 as seed ortholog is 100%.
Bootstrap support for Q7RM03 as seed ortholog is 100%.

Group of orthologs #856. Best score 96 bits
Score difference with first non-orthologous sequence - P.pallidum:96 P.yoelii:96

D3BGQ4              	100.00%		Q7RQ30              	100.00%
Bootstrap support for D3BGQ4 as seed ortholog is 100%.
Bootstrap support for Q7RQ30 as seed ortholog is 100%.

Group of orthologs #857. Best score 95 bits
Score difference with first non-orthologous sequence - P.pallidum:95 P.yoelii:95

D3B3H6              	100.00%		Q7RD52              	100.00%
Bootstrap support for D3B3H6 as seed ortholog is 100%.
Bootstrap support for Q7RD52 as seed ortholog is 100%.

Group of orthologs #858. Best score 95 bits
Score difference with first non-orthologous sequence - P.pallidum:95 P.yoelii:95

D3BAZ9              	100.00%		Q7RE97              	100.00%
Bootstrap support for D3BAZ9 as seed ortholog is 100%.
Bootstrap support for Q7RE97 as seed ortholog is 100%.

Group of orthologs #859. Best score 95 bits
Score difference with first non-orthologous sequence - P.pallidum:95 P.yoelii:95

D3AZB6              	100.00%		Q7RSL1              	100.00%
Bootstrap support for D3AZB6 as seed ortholog is 100%.
Bootstrap support for Q7RSL1 as seed ortholog is 100%.

Group of orthologs #860. Best score 94 bits
Score difference with first non-orthologous sequence - P.pallidum:94 P.yoelii:94

D3B062              	100.00%		Q7RCM5              	100.00%
Bootstrap support for D3B062 as seed ortholog is 100%.
Bootstrap support for Q7RCM5 as seed ortholog is 100%.

Group of orthologs #861. Best score 94 bits
Score difference with first non-orthologous sequence - P.pallidum:94 P.yoelii:94

D3B3G8              	100.00%		Q7RLZ3              	100.00%
Bootstrap support for D3B3G8 as seed ortholog is 100%.
Bootstrap support for Q7RLZ3 as seed ortholog is 100%.

Group of orthologs #862. Best score 94 bits
Score difference with first non-orthologous sequence - P.pallidum:94 P.yoelii:94

D3BC68              	100.00%		Q7RDB3              	100.00%
Bootstrap support for D3BC68 as seed ortholog is 100%.
Bootstrap support for Q7RDB3 as seed ortholog is 100%.

Group of orthologs #863. Best score 94 bits
Score difference with first non-orthologous sequence - P.pallidum:94 P.yoelii:94

D3BQN3              	100.00%		Q7RH97              	100.00%
Bootstrap support for D3BQN3 as seed ortholog is 100%.
Bootstrap support for Q7RH97 as seed ortholog is 100%.

Group of orthologs #864. Best score 93 bits
Score difference with first non-orthologous sequence - P.pallidum:6 P.yoelii:30

D3BVB7              	100.00%		Q7RJE3              	100.00%
D3BLL1              	56.48%		
D3BI50              	56.28%		
D3BLN8              	23.16%		
D3BS52              	14.12%		
D3AZ03              	9.54%		
Bootstrap support for D3BVB7 as seed ortholog is 56%.
Alternative seed ortholog is D3B9M0 (6 bits away from this cluster)
Bootstrap support for Q7RJE3 as seed ortholog is 57%.
Alternative seed ortholog is Q7RRK2 (30 bits away from this cluster)

Group of orthologs #865. Best score 93 bits
Score difference with first non-orthologous sequence - P.pallidum:93 P.yoelii:93

D3B413              	100.00%		Q7RPV3              	100.00%
Bootstrap support for D3B413 as seed ortholog is 100%.
Bootstrap support for Q7RPV3 as seed ortholog is 100%.

Group of orthologs #866. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:42 P.yoelii:92

D3BNT6              	100.00%		Q7RL60              	100.00%
D3BDZ6              	8.38%		
Bootstrap support for D3BNT6 as seed ortholog is 94%.
Bootstrap support for Q7RL60 as seed ortholog is 100%.

Group of orthologs #867. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 P.yoelii:92

D3B010              	100.00%		Q7PDS1              	100.00%
Bootstrap support for D3B010 as seed ortholog is 100%.
Bootstrap support for Q7PDS1 as seed ortholog is 100%.

Group of orthologs #868. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 P.yoelii:45

D3AW79              	100.00%		Q7RIU7              	100.00%
Bootstrap support for D3AW79 as seed ortholog is 100%.
Bootstrap support for Q7RIU7 as seed ortholog is 62%.
Alternative seed ortholog is Q7RLP1 (45 bits away from this cluster)

Group of orthologs #869. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:7 P.yoelii:92

D3AXK3              	100.00%		Q7RJT8              	100.00%
Bootstrap support for D3AXK3 as seed ortholog is 72%.
Alternative seed ortholog is D3B842 (7 bits away from this cluster)
Bootstrap support for Q7RJT8 as seed ortholog is 100%.

Group of orthologs #870. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 P.yoelii:11

D3AZU2              	100.00%		Q7RID6              	100.00%
Bootstrap support for D3AZU2 as seed ortholog is 100%.
Bootstrap support for Q7RID6 as seed ortholog is 86%.

Group of orthologs #871. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 P.yoelii:92

D3BR16              	100.00%		Q7PDR4              	100.00%
Bootstrap support for D3BR16 as seed ortholog is 100%.
Bootstrap support for Q7PDR4 as seed ortholog is 100%.

Group of orthologs #872. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 P.yoelii:92

D3BUI8              	100.00%		Q7RQ93              	100.00%
Bootstrap support for D3BUI8 as seed ortholog is 100%.
Bootstrap support for Q7RQ93 as seed ortholog is 100%.

Group of orthologs #873. Best score 92 bits
Score difference with first non-orthologous sequence - P.pallidum:92 P.yoelii:92

D3BU33              	100.00%		Q7RT01              	100.00%
Bootstrap support for D3BU33 as seed ortholog is 100%.
Bootstrap support for Q7RT01 as seed ortholog is 100%.

Group of orthologs #874. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:91 P.yoelii:16

D3BE02              	100.00%		Q7RBJ8              	100.00%
                    	       		Q7RMD4              	72.73%
                    	       		Q7RPM4              	65.97%
                    	       		Q7RQ68              	61.55%
                    	       		Q7RQT9              	61.43%
                    	       		Q7RQ49              	52.58%
                    	       		Q7RPK0              	45.70%
                    	       		Q7RIG5              	41.40%
                    	       		Q7RN16              	25.68%
                    	       		Q7RKH8              	22.11%
                    	       		Q7RHN3              	9.71%
Bootstrap support for D3BE02 as seed ortholog is 100%.
Bootstrap support for Q7RBJ8 as seed ortholog is 68%.
Alternative seed ortholog is Q7RDK4 (16 bits away from this cluster)

Group of orthologs #875. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:91 P.yoelii:91

D3B774              	100.00%		Q7RK47              	100.00%
D3B266              	5.65%		
Bootstrap support for D3B774 as seed ortholog is 100%.
Bootstrap support for Q7RK47 as seed ortholog is 100%.

Group of orthologs #876. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:20 P.yoelii:91

D3BA43              	100.00%		Q7RJV6              	100.00%
                    	       		Q7RIT5              	6.86%
Bootstrap support for D3BA43 as seed ortholog is 73%.
Alternative seed ortholog is D3B604 (20 bits away from this cluster)
Bootstrap support for Q7RJV6 as seed ortholog is 100%.

Group of orthologs #877. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:91 P.yoelii:91

D3B7E2              	100.00%		Q7PDR3              	100.00%
Bootstrap support for D3B7E2 as seed ortholog is 100%.
Bootstrap support for Q7PDR3 as seed ortholog is 100%.

Group of orthologs #878. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:91 P.yoelii:91

D3BT29              	100.00%		Q7RB57              	100.00%
Bootstrap support for D3BT29 as seed ortholog is 100%.
Bootstrap support for Q7RB57 as seed ortholog is 100%.

Group of orthologs #879. Best score 91 bits
Score difference with first non-orthologous sequence - P.pallidum:91 P.yoelii:91

D3BUE5              	100.00%		Q7RMC5              	100.00%
Bootstrap support for D3BUE5 as seed ortholog is 100%.
Bootstrap support for Q7RMC5 as seed ortholog is 100%.

Group of orthologs #880. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 P.yoelii:90

D3BDC7              	100.00%		Q7R9A0              	100.00%
Bootstrap support for D3BDC7 as seed ortholog is 100%.
Bootstrap support for Q7R9A0 as seed ortholog is 100%.

Group of orthologs #881. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 P.yoelii:90

D3AZW3              	100.00%		Q7RRD9              	100.00%
Bootstrap support for D3AZW3 as seed ortholog is 100%.
Bootstrap support for Q7RRD9 as seed ortholog is 100%.

Group of orthologs #882. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 P.yoelii:90

D3B4P8              	100.00%		Q7RNC9              	100.00%
Bootstrap support for D3B4P8 as seed ortholog is 100%.
Bootstrap support for Q7RNC9 as seed ortholog is 100%.

Group of orthologs #883. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 P.yoelii:90

D3B7S7              	100.00%		Q7RQ11              	100.00%
Bootstrap support for D3B7S7 as seed ortholog is 100%.
Bootstrap support for Q7RQ11 as seed ortholog is 100%.

Group of orthologs #884. Best score 90 bits
Score difference with first non-orthologous sequence - P.pallidum:90 P.yoelii:90

D3BEK8              	100.00%		Q7RRB5              	100.00%
Bootstrap support for D3BEK8 as seed ortholog is 100%.
Bootstrap support for Q7RRB5 as seed ortholog is 100%.

Group of orthologs #885. Best score 89 bits
Score difference with first non-orthologous sequence - P.pallidum:89 P.yoelii:89

D3B6R3              	100.00%		Q7PDT4              	100.00%
Bootstrap support for D3B6R3 as seed ortholog is 100%.
Bootstrap support for Q7PDT4 as seed ortholog is 100%.

Group of orthologs #886. Best score 89 bits
Score difference with first non-orthologous sequence - P.pallidum:89 P.yoelii:89

D3BEM0              	100.00%		Q7RF09              	100.00%
Bootstrap support for D3BEM0 as seed ortholog is 100%.
Bootstrap support for Q7RF09 as seed ortholog is 100%.

Group of orthologs #887. Best score 89 bits
Score difference with first non-orthologous sequence - P.pallidum:89 P.yoelii:89

D3BLD3              	100.00%		Q7RFN0              	100.00%
Bootstrap support for D3BLD3 as seed ortholog is 100%.
Bootstrap support for Q7RFN0 as seed ortholog is 100%.

Group of orthologs #888. Best score 89 bits
Score difference with first non-orthologous sequence - P.pallidum:24 P.yoelii:89

D3BRV0              	100.00%		Q7RD05              	100.00%
Bootstrap support for D3BRV0 as seed ortholog is 84%.
Bootstrap support for Q7RD05 as seed ortholog is 100%.

Group of orthologs #889. Best score 88 bits
Score difference with first non-orthologous sequence - P.pallidum:88 P.yoelii:88

D3B0Y6              	100.00%		Q7REP5              	100.00%
Bootstrap support for D3B0Y6 as seed ortholog is 100%.
Bootstrap support for Q7REP5 as seed ortholog is 100%.

Group of orthologs #890. Best score 88 bits
Score difference with first non-orthologous sequence - P.pallidum:88 P.yoelii:88

D3B4U0              	100.00%		Q7RKG3              	100.00%
Bootstrap support for D3B4U0 as seed ortholog is 100%.
Bootstrap support for Q7RKG3 as seed ortholog is 100%.

Group of orthologs #891. Best score 88 bits
Score difference with first non-orthologous sequence - P.pallidum:88 P.yoelii:88

D3BQV3              	100.00%		Q7RQW5              	100.00%
Bootstrap support for D3BQV3 as seed ortholog is 100%.
Bootstrap support for Q7RQW5 as seed ortholog is 100%.

Group of orthologs #892. Best score 87 bits
Score difference with first non-orthologous sequence - P.pallidum:87 P.yoelii:87

D3B613              	100.00%		Q7RE32              	100.00%
Bootstrap support for D3B613 as seed ortholog is 100%.
Bootstrap support for Q7RE32 as seed ortholog is 100%.

Group of orthologs #893. Best score 87 bits
Score difference with first non-orthologous sequence - P.pallidum:87 P.yoelii:87

D3B9P1              	100.00%		Q7RGA3              	100.00%
Bootstrap support for D3B9P1 as seed ortholog is 100%.
Bootstrap support for Q7RGA3 as seed ortholog is 100%.

Group of orthologs #894. Best score 87 bits
Score difference with first non-orthologous sequence - P.pallidum:87 P.yoelii:87

D3BQ40              	100.00%		Q7PDV6              	100.00%
Bootstrap support for D3BQ40 as seed ortholog is 100%.
Bootstrap support for Q7PDV6 as seed ortholog is 100%.

Group of orthologs #895. Best score 87 bits
Score difference with first non-orthologous sequence - P.pallidum:34 P.yoelii:87

D3BJB1              	100.00%		Q7RJW9              	100.00%
Bootstrap support for D3BJB1 as seed ortholog is 98%.
Bootstrap support for Q7RJW9 as seed ortholog is 100%.

Group of orthologs #896. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:86

D3BFR6              	100.00%		Q7RIP6              	100.00%
D3BRT3              	19.49%		
Bootstrap support for D3BFR6 as seed ortholog is 100%.
Bootstrap support for Q7RIP6 as seed ortholog is 100%.

Group of orthologs #897. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:86

D3B6L2              	100.00%		Q7RC85              	100.00%
Bootstrap support for D3B6L2 as seed ortholog is 100%.
Bootstrap support for Q7RC85 as seed ortholog is 100%.

Group of orthologs #898. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:86

D3B508              	100.00%		Q7RIS0              	100.00%
Bootstrap support for D3B508 as seed ortholog is 100%.
Bootstrap support for Q7RIS0 as seed ortholog is 100%.

Group of orthologs #899. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:86

D3B7D5              	100.00%		Q7RJN5              	100.00%
Bootstrap support for D3B7D5 as seed ortholog is 100%.
Bootstrap support for Q7RJN5 as seed ortholog is 100%.

Group of orthologs #900. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:86

D3BQV6              	100.00%		Q7R6W4              	100.00%
Bootstrap support for D3BQV6 as seed ortholog is 100%.
Bootstrap support for Q7R6W4 as seed ortholog is 100%.

Group of orthologs #901. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:34

D3BUE2              	100.00%		Q7PDR5              	100.00%
Bootstrap support for D3BUE2 as seed ortholog is 100%.
Bootstrap support for Q7PDR5 as seed ortholog is 97%.

Group of orthologs #902. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:86 P.yoelii:86

D3BMA2              	100.00%		Q7RHU6              	100.00%
Bootstrap support for D3BMA2 as seed ortholog is 100%.
Bootstrap support for Q7RHU6 as seed ortholog is 100%.

Group of orthologs #903. Best score 86 bits
Score difference with first non-orthologous sequence - P.pallidum:15 P.yoelii:86

D3BR31              	100.00%		Q7RHG0              	100.00%
Bootstrap support for D3BR31 as seed ortholog is 69%.
Alternative seed ortholog is D3B3T0 (15 bits away from this cluster)
Bootstrap support for Q7RHG0 as seed ortholog is 100%.

Group of orthologs #904. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:12 P.yoelii:85

D3B3X7              	100.00%		Q7RCZ5              	100.00%
D3BEV0              	5.19%		
Bootstrap support for D3B3X7 as seed ortholog is 86%.
Bootstrap support for Q7RCZ5 as seed ortholog is 100%.

Group of orthologs #905. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:85 P.yoelii:85

D3BQC9              	100.00%		Q7RD15              	100.00%
Bootstrap support for D3BQC9 as seed ortholog is 100%.
Bootstrap support for Q7RD15 as seed ortholog is 100%.

Group of orthologs #906. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:85 P.yoelii:85

D3BFH1              	100.00%		Q7RNB1              	100.00%
Bootstrap support for D3BFH1 as seed ortholog is 100%.
Bootstrap support for Q7RNB1 as seed ortholog is 100%.

Group of orthologs #907. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:85 P.yoelii:12

D3BV52              	100.00%		Q7RJN6              	100.00%
Bootstrap support for D3BV52 as seed ortholog is 100%.
Bootstrap support for Q7RJN6 as seed ortholog is 64%.
Alternative seed ortholog is Q7RRY0 (12 bits away from this cluster)

Group of orthologs #908. Best score 85 bits
Score difference with first non-orthologous sequence - P.pallidum:85 P.yoelii:85

D3BQ60              	100.00%		Q7RRA6              	100.00%
Bootstrap support for D3BQ60 as seed ortholog is 100%.
Bootstrap support for Q7RRA6 as seed ortholog is 100%.

Group of orthologs #909. Best score 84 bits
Score difference with first non-orthologous sequence - P.pallidum:84 P.yoelii:84

D3AW61              	100.00%		Q7R7P0              	100.00%
Bootstrap support for D3AW61 as seed ortholog is 100%.
Bootstrap support for Q7R7P0 as seed ortholog is 100%.

Group of orthologs #910. Best score 84 bits
Score difference with first non-orthologous sequence - P.pallidum:84 P.yoelii:84

D3B165              	100.00%		Q7R8X0              	100.00%
Bootstrap support for D3B165 as seed ortholog is 100%.
Bootstrap support for Q7R8X0 as seed ortholog is 100%.

Group of orthologs #911. Best score 84 bits
Score difference with first non-orthologous sequence - P.pallidum:84 P.yoelii:84

D3BNY3              	100.00%		Q7R7M6              	100.00%
Bootstrap support for D3BNY3 as seed ortholog is 100%.
Bootstrap support for Q7R7M6 as seed ortholog is 100%.

Group of orthologs #912. Best score 84 bits
Score difference with first non-orthologous sequence - P.pallidum:84 P.yoelii:84

D3BE11              	100.00%		Q7RIF6              	100.00%
Bootstrap support for D3BE11 as seed ortholog is 100%.
Bootstrap support for Q7RIF6 as seed ortholog is 100%.

Group of orthologs #913. Best score 84 bits
Score difference with first non-orthologous sequence - P.pallidum:84 P.yoelii:84

D3BV55              	100.00%		Q7RCT5              	100.00%
Bootstrap support for D3BV55 as seed ortholog is 100%.
Bootstrap support for Q7RCT5 as seed ortholog is 100%.

Group of orthologs #914. Best score 83 bits
Score difference with first non-orthologous sequence - P.pallidum:83 P.yoelii:83

D3B7B3              	100.00%		Q7RK22              	100.00%
Bootstrap support for D3B7B3 as seed ortholog is 100%.
Bootstrap support for Q7RK22 as seed ortholog is 100%.

Group of orthologs #915. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3B7G7              	100.00%		Q7RGJ2              	100.00%
D3B7G4              	100.00%		Q7RSB7              	100.00%
D3B7G5              	40.98%		
D3B7G6              	32.83%		
Bootstrap support for D3B7G7 as seed ortholog is 100%.
Bootstrap support for D3B7G4 as seed ortholog is 100%.
Bootstrap support for Q7RGJ2 as seed ortholog is 100%.
Bootstrap support for Q7RSB7 as seed ortholog is 100%.

Group of orthologs #916. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3B4P6              	100.00%		Q7RFV2              	100.00%
Bootstrap support for D3B4P6 as seed ortholog is 100%.
Bootstrap support for Q7RFV2 as seed ortholog is 100%.

Group of orthologs #917. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3B7W9              	100.00%		Q7RD41              	100.00%
Bootstrap support for D3B7W9 as seed ortholog is 100%.
Bootstrap support for Q7RD41 as seed ortholog is 100%.

Group of orthologs #918. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3BKE4              	100.00%		Q7RKF0              	100.00%
Bootstrap support for D3BKE4 as seed ortholog is 100%.
Bootstrap support for Q7RKF0 as seed ortholog is 100%.

Group of orthologs #919. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3BM22              	100.00%		Q7RJX3              	100.00%
Bootstrap support for D3BM22 as seed ortholog is 100%.
Bootstrap support for Q7RJX3 as seed ortholog is 100%.

Group of orthologs #920. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3BPS7              	100.00%		Q7RKP0              	100.00%
Bootstrap support for D3BPS7 as seed ortholog is 100%.
Bootstrap support for Q7RKP0 as seed ortholog is 100%.

Group of orthologs #921. Best score 82 bits
Score difference with first non-orthologous sequence - P.pallidum:82 P.yoelii:82

D3BRR6              	100.00%		Q7RKJ6              	100.00%
Bootstrap support for D3BRR6 as seed ortholog is 100%.
Bootstrap support for Q7RKJ6 as seed ortholog is 100%.

Group of orthologs #922. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BPQ3              	100.00%		Q7RHB3              	100.00%
D3BUI0              	5.72%		
Bootstrap support for D3BPQ3 as seed ortholog is 100%.
Bootstrap support for Q7RHB3 as seed ortholog is 100%.

Group of orthologs #923. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3AWX6              	100.00%		Q7PDM1              	100.00%
Bootstrap support for D3AWX6 as seed ortholog is 100%.
Bootstrap support for Q7PDM1 as seed ortholog is 100%.

Group of orthologs #924. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BC41              	100.00%		Q7R9T6              	100.00%
Bootstrap support for D3BC41 as seed ortholog is 100%.
Bootstrap support for Q7R9T6 as seed ortholog is 100%.

Group of orthologs #925. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3B2Q5              	100.00%		Q7RL00              	100.00%
Bootstrap support for D3B2Q5 as seed ortholog is 100%.
Bootstrap support for Q7RL00 as seed ortholog is 100%.

Group of orthologs #926. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BFI5              	100.00%		Q7RAD9              	100.00%
Bootstrap support for D3BFI5 as seed ortholog is 100%.
Bootstrap support for Q7RAD9 as seed ortholog is 100%.

Group of orthologs #927. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BK63              	100.00%		Q7R991              	100.00%
Bootstrap support for D3BK63 as seed ortholog is 100%.
Bootstrap support for Q7R991 as seed ortholog is 100%.

Group of orthologs #928. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BFL2              	100.00%		Q7RF88              	100.00%
Bootstrap support for D3BFL2 as seed ortholog is 100%.
Bootstrap support for Q7RF88 as seed ortholog is 100%.

Group of orthologs #929. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BND9              	100.00%		Q7RE71              	100.00%
Bootstrap support for D3BND9 as seed ortholog is 100%.
Bootstrap support for Q7RE71 as seed ortholog is 100%.

Group of orthologs #930. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BBU4              	100.00%		Q7RRX1              	100.00%
Bootstrap support for D3BBU4 as seed ortholog is 100%.
Bootstrap support for Q7RRX1 as seed ortholog is 100%.

Group of orthologs #931. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BHD2              	100.00%		Q7RM96              	100.00%
Bootstrap support for D3BHD2 as seed ortholog is 100%.
Bootstrap support for Q7RM96 as seed ortholog is 100%.

Group of orthologs #932. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BKE3              	100.00%		Q7RLS8              	100.00%
Bootstrap support for D3BKE3 as seed ortholog is 100%.
Bootstrap support for Q7RLS8 as seed ortholog is 100%.

Group of orthologs #933. Best score 81 bits
Score difference with first non-orthologous sequence - P.pallidum:81 P.yoelii:81

D3BP63              	100.00%		Q7RRW3              	100.00%
Bootstrap support for D3BP63 as seed ortholog is 100%.
Bootstrap support for Q7RRW3 as seed ortholog is 100%.

Group of orthologs #934. Best score 80 bits
Score difference with first non-orthologous sequence - P.pallidum:80 P.yoelii:80

D3BAS3              	100.00%		Q7RFH6              	100.00%
Bootstrap support for D3BAS3 as seed ortholog is 100%.
Bootstrap support for Q7RFH6 as seed ortholog is 100%.

Group of orthologs #935. Best score 80 bits
Score difference with first non-orthologous sequence - P.pallidum:80 P.yoelii:80

D3BG96              	100.00%		Q7RRB9              	100.00%
Bootstrap support for D3BG96 as seed ortholog is 100%.
Bootstrap support for Q7RRB9 as seed ortholog is 100%.

Group of orthologs #936. Best score 80 bits
Score difference with first non-orthologous sequence - P.pallidum:80 P.yoelii:80

D3BUX7              	100.00%		Q7RKX2              	100.00%
Bootstrap support for D3BUX7 as seed ortholog is 100%.
Bootstrap support for Q7RKX2 as seed ortholog is 100%.

Group of orthologs #937. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:79 P.yoelii:79

D3B2K3              	100.00%		Q7RGU8              	100.00%
Bootstrap support for D3B2K3 as seed ortholog is 100%.
Bootstrap support for Q7RGU8 as seed ortholog is 100%.

Group of orthologs #938. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:79 P.yoelii:79

D3B912              	100.00%		Q7RJM4              	100.00%
Bootstrap support for D3B912 as seed ortholog is 100%.
Bootstrap support for Q7RJM4 as seed ortholog is 100%.

Group of orthologs #939. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:79 P.yoelii:79

D3BAU6              	100.00%		Q7RIV5              	100.00%
Bootstrap support for D3BAU6 as seed ortholog is 100%.
Bootstrap support for Q7RIV5 as seed ortholog is 100%.

Group of orthologs #940. Best score 79 bits
Score difference with first non-orthologous sequence - P.pallidum:79 P.yoelii:79

D3BNC7              	100.00%		Q7R8G5              	100.00%
Bootstrap support for D3BNC7 as seed ortholog is 100%.
Bootstrap support for Q7R8G5 as seed ortholog is 100%.

Group of orthologs #941. Best score 78 bits
Score difference with first non-orthologous sequence - P.pallidum:78 P.yoelii:78

D3BNB6              	100.00%		Q7RJ11              	100.00%
Bootstrap support for D3BNB6 as seed ortholog is 100%.
Bootstrap support for Q7RJ11 as seed ortholog is 100%.

Group of orthologs #942. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:77

D3B886              	100.00%		Q7RA43              	100.00%
Bootstrap support for D3B886 as seed ortholog is 100%.
Bootstrap support for Q7RA43 as seed ortholog is 100%.

Group of orthologs #943. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:18 P.yoelii:77

D3BEI6              	100.00%		Q7R965              	100.00%
Bootstrap support for D3BEI6 as seed ortholog is 84%.
Bootstrap support for Q7R965 as seed ortholog is 100%.

Group of orthologs #944. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:77

D3BB09              	100.00%		Q7REP7              	100.00%
Bootstrap support for D3BB09 as seed ortholog is 100%.
Bootstrap support for Q7REP7 as seed ortholog is 100%.

Group of orthologs #945. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:77

D3B668              	100.00%		Q7RM28              	100.00%
Bootstrap support for D3B668 as seed ortholog is 100%.
Bootstrap support for Q7RM28 as seed ortholog is 100%.

Group of orthologs #946. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:77

D3BJY7              	100.00%		Q7RD22              	100.00%
Bootstrap support for D3BJY7 as seed ortholog is 100%.
Bootstrap support for Q7RD22 as seed ortholog is 100%.

Group of orthologs #947. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:8 P.yoelii:77

D3BJW4              	100.00%		Q7RKG8              	100.00%
Bootstrap support for D3BJW4 as seed ortholog is 56%.
Alternative seed ortholog is D3AXI6 (8 bits away from this cluster)
Bootstrap support for Q7RKG8 as seed ortholog is 100%.

Group of orthologs #948. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:77

D3BN29              	100.00%		Q7RPJ7              	100.00%
Bootstrap support for D3BN29 as seed ortholog is 100%.
Bootstrap support for Q7RPJ7 as seed ortholog is 100%.

Group of orthologs #949. Best score 77 bits
Score difference with first non-orthologous sequence - P.pallidum:77 P.yoelii:77

D3BTL0              	100.00%		Q7RN09              	100.00%
Bootstrap support for D3BTL0 as seed ortholog is 100%.
Bootstrap support for Q7RN09 as seed ortholog is 100%.

Group of orthologs #950. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3AWW2              	100.00%		Q7R8J3              	100.00%
Bootstrap support for D3AWW2 as seed ortholog is 100%.
Bootstrap support for Q7R8J3 as seed ortholog is 100%.

Group of orthologs #951. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3AYJ3              	100.00%		Q7R910              	100.00%
Bootstrap support for D3AYJ3 as seed ortholog is 100%.
Bootstrap support for Q7R910 as seed ortholog is 100%.

Group of orthologs #952. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3B4F5              	100.00%		Q7R839              	100.00%
Bootstrap support for D3B4F5 as seed ortholog is 100%.
Bootstrap support for Q7R839 as seed ortholog is 100%.

Group of orthologs #953. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3BC01              	100.00%		Q7RDB4              	100.00%
Bootstrap support for D3BC01 as seed ortholog is 100%.
Bootstrap support for Q7RDB4 as seed ortholog is 100%.

Group of orthologs #954. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3AZR0              	100.00%		Q7RTC7              	100.00%
Bootstrap support for D3AZR0 as seed ortholog is 100%.
Bootstrap support for Q7RTC7 as seed ortholog is 100%.

Group of orthologs #955. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3BB02              	100.00%		Q7RHD0              	100.00%
Bootstrap support for D3BB02 as seed ortholog is 100%.
Bootstrap support for Q7RHD0 as seed ortholog is 100%.

Group of orthologs #956. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3BM02              	100.00%		Q7RAH0              	100.00%
Bootstrap support for D3BM02 as seed ortholog is 100%.
Bootstrap support for Q7RAH0 as seed ortholog is 100%.

Group of orthologs #957. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3BMQ0              	100.00%		Q7RIU0              	100.00%
Bootstrap support for D3BMQ0 as seed ortholog is 100%.
Bootstrap support for Q7RIU0 as seed ortholog is 100%.

Group of orthologs #958. Best score 76 bits
Score difference with first non-orthologous sequence - P.pallidum:76 P.yoelii:76

D3BTG7              	100.00%		Q7RI08              	100.00%
Bootstrap support for D3BTG7 as seed ortholog is 100%.
Bootstrap support for Q7RI08 as seed ortholog is 100%.

Group of orthologs #959. Best score 75 bits
Score difference with first non-orthologous sequence - P.pallidum:75 P.yoelii:26

D3BFU7              	100.00%		Q7RAT5              	100.00%
D3AWD8              	14.41%		
Bootstrap support for D3BFU7 as seed ortholog is 100%.
Bootstrap support for Q7RAT5 as seed ortholog is 78%.

Group of orthologs #960. Best score 75 bits
Score difference with first non-orthologous sequence - P.pallidum:75 P.yoelii:75

D3BT15              	100.00%		Q7RMW8              	100.00%
Bootstrap support for D3BT15 as seed ortholog is 100%.
Bootstrap support for Q7RMW8 as seed ortholog is 100%.

Group of orthologs #961. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3BGY8              	100.00%		Q7RSG8              	100.00%
                    	       		Q7RNK4              	20.93%
Bootstrap support for D3BGY8 as seed ortholog is 100%.
Bootstrap support for Q7RSG8 as seed ortholog is 100%.

Group of orthologs #962. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3BAV8              	100.00%		Q7R7Y1              	100.00%
Bootstrap support for D3BAV8 as seed ortholog is 100%.
Bootstrap support for Q7R7Y1 as seed ortholog is 100%.

Group of orthologs #963. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3B202              	100.00%		Q7RJY1              	100.00%
Bootstrap support for D3B202 as seed ortholog is 100%.
Bootstrap support for Q7RJY1 as seed ortholog is 100%.

Group of orthologs #964. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3BHV3              	100.00%		Q7R9X6              	100.00%
Bootstrap support for D3BHV3 as seed ortholog is 100%.
Bootstrap support for Q7R9X6 as seed ortholog is 100%.

Group of orthologs #965. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3BDP9              	100.00%		Q7RNJ9              	100.00%
Bootstrap support for D3BDP9 as seed ortholog is 100%.
Bootstrap support for Q7RNJ9 as seed ortholog is 100%.

Group of orthologs #966. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3BQ01              	100.00%		Q7RSD5              	100.00%
Bootstrap support for D3BQ01 as seed ortholog is 100%.
Bootstrap support for Q7RSD5 as seed ortholog is 100%.

Group of orthologs #967. Best score 74 bits
Score difference with first non-orthologous sequence - P.pallidum:74 P.yoelii:74

D3BUP0              	100.00%		Q7RPI4              	100.00%
Bootstrap support for D3BUP0 as seed ortholog is 100%.
Bootstrap support for Q7RPI4 as seed ortholog is 100%.

Group of orthologs #968. Best score 73 bits
Score difference with first non-orthologous sequence - P.pallidum:73 P.yoelii:73

D3AYP4              	100.00%		Q7REC1              	100.00%
Bootstrap support for D3AYP4 as seed ortholog is 100%.
Bootstrap support for Q7REC1 as seed ortholog is 100%.

Group of orthologs #969. Best score 73 bits
Score difference with first non-orthologous sequence - P.pallidum:73 P.yoelii:73

D3B9C3              	100.00%		Q7RIK5              	100.00%
Bootstrap support for D3B9C3 as seed ortholog is 100%.
Bootstrap support for Q7RIK5 as seed ortholog is 100%.

Group of orthologs #970. Best score 73 bits
Score difference with first non-orthologous sequence - P.pallidum:73 P.yoelii:73

D3BCB8              	100.00%		Q7RQ57              	100.00%
Bootstrap support for D3BCB8 as seed ortholog is 100%.
Bootstrap support for Q7RQ57 as seed ortholog is 100%.

Group of orthologs #971. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:72

D3BAD3              	100.00%		Q7RPY0              	100.00%
D3BI35              	18.80%		
D3AVV7              	18.09%		
Bootstrap support for D3BAD3 as seed ortholog is 100%.
Bootstrap support for Q7RPY0 as seed ortholog is 100%.

Group of orthologs #972. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:19 P.yoelii:72

D3B5Y6              	100.00%		Q7RNC7              	100.00%
D3BG84              	5.74%		
Bootstrap support for D3B5Y6 as seed ortholog is 76%.
Bootstrap support for Q7RNC7 as seed ortholog is 100%.

Group of orthologs #973. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:72

D3BEW0              	100.00%		Q7RBI3              	100.00%
Bootstrap support for D3BEW0 as seed ortholog is 100%.
Bootstrap support for Q7RBI3 as seed ortholog is 100%.

Group of orthologs #974. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:72

D3B5U8              	100.00%		Q7RQ05              	100.00%
Bootstrap support for D3B5U8 as seed ortholog is 100%.
Bootstrap support for Q7RQ05 as seed ortholog is 100%.

Group of orthologs #975. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:72

D3B793              	100.00%		Q7RT37              	100.00%
Bootstrap support for D3B793 as seed ortholog is 100%.
Bootstrap support for Q7RT37 as seed ortholog is 100%.

Group of orthologs #976. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:72

D3BKF8              	100.00%		Q7RFJ5              	100.00%
Bootstrap support for D3BKF8 as seed ortholog is 100%.
Bootstrap support for Q7RFJ5 as seed ortholog is 100%.

Group of orthologs #977. Best score 72 bits
Score difference with first non-orthologous sequence - P.pallidum:72 P.yoelii:72

D3BJX8              	100.00%		Q7RLQ6              	100.00%
Bootstrap support for D3BJX8 as seed ortholog is 100%.
Bootstrap support for Q7RLQ6 as seed ortholog is 100%.

Group of orthologs #978. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3BQ27              	100.00%		Q7RC34              	100.00%
D3BRS7              	23.68%		
D3B667              	20.54%		
Bootstrap support for D3BQ27 as seed ortholog is 100%.
Bootstrap support for Q7RC34 as seed ortholog is 100%.

Group of orthologs #979. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3BCT5              	100.00%		Q7R737              	100.00%
D3BE81              	62.52%		
Bootstrap support for D3BCT5 as seed ortholog is 100%.
Bootstrap support for Q7R737 as seed ortholog is 100%.

Group of orthologs #980. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3B811              	100.00%		Q7RE83              	100.00%
                    	       		Q7R8Z3              	28.78%
Bootstrap support for D3B811 as seed ortholog is 100%.
Bootstrap support for Q7RE83 as seed ortholog is 100%.

Group of orthologs #981. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3AXF0              	100.00%		Q7RCD1              	100.00%
Bootstrap support for D3AXF0 as seed ortholog is 100%.
Bootstrap support for Q7RCD1 as seed ortholog is 100%.

Group of orthologs #982. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3AY14              	100.00%		Q7RR18              	100.00%
Bootstrap support for D3AY14 as seed ortholog is 100%.
Bootstrap support for Q7RR18 as seed ortholog is 100%.

Group of orthologs #983. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3B5D0              	100.00%		Q7RQ90              	100.00%
Bootstrap support for D3B5D0 as seed ortholog is 100%.
Bootstrap support for Q7RQ90 as seed ortholog is 100%.

Group of orthologs #984. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3BJK9              	100.00%		Q7RCT6              	100.00%
Bootstrap support for D3BJK9 as seed ortholog is 100%.
Bootstrap support for Q7RCT6 as seed ortholog is 100%.

Group of orthologs #985. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:5

D3BRH7              	100.00%		Q7R8P7              	100.00%
Bootstrap support for D3BRH7 as seed ortholog is 100%.
Bootstrap support for Q7R8P7 as seed ortholog is 56%.
Alternative seed ortholog is Q7RIB0 (5 bits away from this cluster)

Group of orthologs #986. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3BAB3              	100.00%		Q7RQ02              	100.00%
Bootstrap support for D3BAB3 as seed ortholog is 100%.
Bootstrap support for Q7RQ02 as seed ortholog is 100%.

Group of orthologs #987. Best score 71 bits
Score difference with first non-orthologous sequence - P.pallidum:71 P.yoelii:71

D3BUQ1              	100.00%		Q7RLM9              	100.00%
Bootstrap support for D3BUQ1 as seed ortholog is 100%.
Bootstrap support for Q7RLM9 as seed ortholog is 100%.

Group of orthologs #988. Best score 70 bits
Score difference with first non-orthologous sequence - P.pallidum:70 P.yoelii:70

D3B351              	100.00%		Q7R7E5              	100.00%
Bootstrap support for D3B351 as seed ortholog is 100%.
Bootstrap support for Q7R7E5 as seed ortholog is 100%.

Group of orthologs #989. Best score 70 bits
Score difference with first non-orthologous sequence - P.pallidum:70 P.yoelii:70

D3AZM3              	100.00%		Q7RFP5              	100.00%
Bootstrap support for D3AZM3 as seed ortholog is 100%.
Bootstrap support for Q7RFP5 as seed ortholog is 100%.

Group of orthologs #990. Best score 70 bits
Score difference with first non-orthologous sequence - P.pallidum:70 P.yoelii:70

D3BEQ8              	100.00%		Q7RQZ3              	100.00%
Bootstrap support for D3BEQ8 as seed ortholog is 100%.
Bootstrap support for Q7RQZ3 as seed ortholog is 100%.

Group of orthologs #991. Best score 70 bits
Score difference with first non-orthologous sequence - P.pallidum:13 P.yoelii:70

D3BV60              	100.00%		Q7RMU3              	100.00%
Bootstrap support for D3BV60 as seed ortholog is 78%.
Bootstrap support for Q7RMU3 as seed ortholog is 100%.

Group of orthologs #992. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 P.yoelii:69

D3B4X6              	100.00%		Q7RKE8              	100.00%
Bootstrap support for D3B4X6 as seed ortholog is 100%.
Bootstrap support for Q7RKE8 as seed ortholog is 100%.

Group of orthologs #993. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 P.yoelii:69

D3BF45              	100.00%		Q7RH53              	100.00%
Bootstrap support for D3BF45 as seed ortholog is 100%.
Bootstrap support for Q7RH53 as seed ortholog is 100%.

Group of orthologs #994. Best score 69 bits
Score difference with first non-orthologous sequence - P.pallidum:69 P.yoelii:69

D3BKI9              	100.00%		Q7RN11              	100.00%
Bootstrap support for D3BKI9 as seed ortholog is 100%.
Bootstrap support for Q7RN11 as seed ortholog is 100%.

Group of orthologs #995. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:23 P.yoelii:68

D3B664              	100.00%		Q7RD87              	100.00%
Bootstrap support for D3B664 as seed ortholog is 56%.
Alternative seed ortholog is D3B646 (23 bits away from this cluster)
Bootstrap support for Q7RD87 as seed ortholog is 100%.

Group of orthologs #996. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:68 P.yoelii:68

D3B482              	100.00%		Q7RG48              	100.00%
Bootstrap support for D3B482 as seed ortholog is 100%.
Bootstrap support for Q7RG48 as seed ortholog is 100%.

Group of orthologs #997. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:68 P.yoelii:68

D3BDZ5              	100.00%		Q7RE39              	100.00%
Bootstrap support for D3BDZ5 as seed ortholog is 100%.
Bootstrap support for Q7RE39 as seed ortholog is 100%.

Group of orthologs #998. Best score 68 bits
Score difference with first non-orthologous sequence - P.pallidum:68 P.yoelii:68

D3BCC3              	100.00%		Q7RKE5              	100.00%
Bootstrap support for D3BCC3 as seed ortholog is 100%.
Bootstrap support for Q7RKE5 as seed ortholog is 100%.

Group of orthologs #999. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:67

D3BN28              	100.00%		Q7RA46              	100.00%
D3BJB8              	6.95%		
Bootstrap support for D3BN28 as seed ortholog is 100%.
Bootstrap support for Q7RA46 as seed ortholog is 100%.

Group of orthologs #1000. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:67

D3BSZ3              	100.00%		Q7RIY2              	100.00%
D3BFK9              	37.55%		
Bootstrap support for D3BSZ3 as seed ortholog is 100%.
Bootstrap support for Q7RIY2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:1 P.yoelii:27

D3B6I2              	100.00%		Q7RH10              	100.00%
Bootstrap support for D3B6I2 as seed ortholog is 51%.
Alternative seed ortholog is D3BAT7 (1 bits away from this cluster)
Bootstrap support for Q7RH10 as seed ortholog is 93%.

Group of orthologs #1002. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:67

D3BD34              	100.00%		Q7RKV5              	100.00%
Bootstrap support for D3BD34 as seed ortholog is 100%.
Bootstrap support for Q7RKV5 as seed ortholog is 100%.

Group of orthologs #1003. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:67

D3BEH5              	100.00%		Q7RJV9              	100.00%
Bootstrap support for D3BEH5 as seed ortholog is 100%.
Bootstrap support for Q7RJV9 as seed ortholog is 100%.

Group of orthologs #1004. Best score 67 bits
Score difference with first non-orthologous sequence - P.pallidum:67 P.yoelii:67

D3BNF6              	100.00%		Q7RQK5              	100.00%
Bootstrap support for D3BNF6 as seed ortholog is 100%.
Bootstrap support for Q7RQK5 as seed ortholog is 100%.

Group of orthologs #1005. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:18 P.yoelii:66

D3BTX0              	100.00%		Q7RS01              	100.00%
D3B687              	96.05%		
D3B689              	90.68%		
D3B692              	87.29%		
D3BHK6              	32.49%		
Bootstrap support for D3BTX0 as seed ortholog is 65%.
Alternative seed ortholog is D3BFW6 (18 bits away from this cluster)
Bootstrap support for Q7RS01 as seed ortholog is 100%.

Group of orthologs #1006. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:66 P.yoelii:66

D3B7S8              	100.00%		Q7R992              	100.00%
D3BDB6              	23.48%		
Bootstrap support for D3B7S8 as seed ortholog is 100%.
Bootstrap support for Q7R992 as seed ortholog is 100%.

Group of orthologs #1007. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:66 P.yoelii:66

D3B4Y2              	100.00%		Q7RLL5              	100.00%
Bootstrap support for D3B4Y2 as seed ortholog is 100%.
Bootstrap support for Q7RLL5 as seed ortholog is 100%.

Group of orthologs #1008. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:66 P.yoelii:66

D3B733              	100.00%		Q7RSU9              	100.00%
Bootstrap support for D3B733 as seed ortholog is 100%.
Bootstrap support for Q7RSU9 as seed ortholog is 100%.

Group of orthologs #1009. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:66 P.yoelii:66

D3BEG2              	100.00%		Q7RP00              	100.00%
Bootstrap support for D3BEG2 as seed ortholog is 100%.
Bootstrap support for Q7RP00 as seed ortholog is 100%.

Group of orthologs #1010. Best score 66 bits
Score difference with first non-orthologous sequence - P.pallidum:66 P.yoelii:66

D3BPK0              	100.00%		Q7RKZ8              	100.00%
Bootstrap support for D3BPK0 as seed ortholog is 100%.
Bootstrap support for Q7RKZ8 as seed ortholog is 100%.

Group of orthologs #1011. Best score 65 bits
Score difference with first non-orthologous sequence - P.pallidum:15 P.yoelii:65

D3B129              	100.00%		Q7RD53              	100.00%
Bootstrap support for D3B129 as seed ortholog is 62%.
Alternative seed ortholog is D3BHE1 (15 bits away from this cluster)
Bootstrap support for Q7RD53 as seed ortholog is 100%.

Group of orthologs #1012. Best score 65 bits
Score difference with first non-orthologous sequence - P.pallidum:65 P.yoelii:65

D3B0E9              	100.00%		Q7RJ41              	100.00%
Bootstrap support for D3B0E9 as seed ortholog is 100%.
Bootstrap support for Q7RJ41 as seed ortholog is 100%.

Group of orthologs #1013. Best score 65 bits
Score difference with first non-orthologous sequence - P.pallidum:65 P.yoelii:65

D3AZU6              	100.00%		Q7RP50              	100.00%
Bootstrap support for D3AZU6 as seed ortholog is 100%.
Bootstrap support for Q7RP50 as seed ortholog is 100%.

Group of orthologs #1014. Best score 65 bits
Score difference with first non-orthologous sequence - P.pallidum:65 P.yoelii:65

D3BBB0              	100.00%		Q7RP80              	100.00%
Bootstrap support for D3BBB0 as seed ortholog is 100%.
Bootstrap support for Q7RP80 as seed ortholog is 100%.

Group of orthologs #1015. Best score 65 bits
Score difference with first non-orthologous sequence - P.pallidum:65 P.yoelii:65

D3BNN0              	100.00%		Q7RH83              	100.00%
Bootstrap support for D3BNN0 as seed ortholog is 100%.
Bootstrap support for Q7RH83 as seed ortholog is 100%.

Group of orthologs #1016. Best score 64 bits
Score difference with first non-orthologous sequence - P.pallidum:4 P.yoelii:64

D3B172              	100.00%		Q7RIJ3              	100.00%
Bootstrap support for D3B172 as seed ortholog is 60%.
Alternative seed ortholog is D3BJA5 (4 bits away from this cluster)
Bootstrap support for Q7RIJ3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 64 bits
Score difference with first non-orthologous sequence - P.pallidum:64 P.yoelii:64

D3B734              	100.00%		Q7RG74              	100.00%
Bootstrap support for D3B734 as seed ortholog is 100%.
Bootstrap support for Q7RG74 as seed ortholog is 100%.

Group of orthologs #1018. Best score 64 bits
Score difference with first non-orthologous sequence - P.pallidum:64 P.yoelii:64

D3BHI4              	100.00%		Q7RCF2              	100.00%
Bootstrap support for D3BHI4 as seed ortholog is 100%.
Bootstrap support for Q7RCF2 as seed ortholog is 100%.

Group of orthologs #1019. Best score 63 bits
Score difference with first non-orthologous sequence - P.pallidum:63 P.yoelii:63

D3BTW1              	100.00%		Q7RC63              	100.00%
D3B556              	18.97%		
Bootstrap support for D3BTW1 as seed ortholog is 100%.
Bootstrap support for Q7RC63 as seed ortholog is 100%.

Group of orthologs #1020. Best score 63 bits
Score difference with first non-orthologous sequence - P.pallidum:63 P.yoelii:63

D3BFN4              	100.00%		Q7RS26              	100.00%
Bootstrap support for D3BFN4 as seed ortholog is 100%.
Bootstrap support for Q7RS26 as seed ortholog is 100%.

Group of orthologs #1021. Best score 62 bits
Score difference with first non-orthologous sequence - P.pallidum:62 P.yoelii:20

D3B053              	100.00%		Q7RF51              	100.00%
D3B2T3              	11.40%		
D3B478              	6.98%		
Bootstrap support for D3B053 as seed ortholog is 100%.
Bootstrap support for Q7RF51 as seed ortholog is 79%.

Group of orthologs #1022. Best score 62 bits
Score difference with first non-orthologous sequence - P.pallidum:62 P.yoelii:62

D3BF90              	100.00%		Q7RLF3              	100.00%
Bootstrap support for D3BF90 as seed ortholog is 100%.
Bootstrap support for Q7RLF3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 62 bits
Score difference with first non-orthologous sequence - P.pallidum:62 P.yoelii:62

D3BSK1              	100.00%		Q7RJF2              	100.00%
Bootstrap support for D3BSK1 as seed ortholog is 100%.
Bootstrap support for Q7RJF2 as seed ortholog is 100%.

Group of orthologs #1024. Best score 61 bits
Score difference with first non-orthologous sequence - P.pallidum:61 P.yoelii:61

D3BH21              	100.00%		Q7RQP5              	100.00%
D3B4Z4              	12.53%		
Bootstrap support for D3BH21 as seed ortholog is 100%.
Bootstrap support for Q7RQP5 as seed ortholog is 100%.

Group of orthologs #1025. Best score 61 bits
Score difference with first non-orthologous sequence - P.pallidum:61 P.yoelii:61

D3BH64              	100.00%		Q7R9S3              	100.00%
Bootstrap support for D3BH64 as seed ortholog is 100%.
Bootstrap support for Q7R9S3 as seed ortholog is 100%.

Group of orthologs #1026. Best score 61 bits
Score difference with first non-orthologous sequence - P.pallidum:61 P.yoelii:61

D3BTE5              	100.00%		Q7RH47              	100.00%
Bootstrap support for D3BTE5 as seed ortholog is 100%.
Bootstrap support for Q7RH47 as seed ortholog is 100%.

Group of orthologs #1027. Best score 60 bits
Score difference with first non-orthologous sequence - P.pallidum:60 P.yoelii:15

D3BQ72              	100.00%		Q7RIR7              	100.00%
D3B9K5              	40.91%		
D3BL18              	15.03%		
D3B8B1              	5.77%		
Bootstrap support for D3BQ72 as seed ortholog is 100%.
Bootstrap support for Q7RIR7 as seed ortholog is 66%.
Alternative seed ortholog is Q7RIL9 (15 bits away from this cluster)

Group of orthologs #1028. Best score 60 bits
Score difference with first non-orthologous sequence - P.pallidum:60 P.yoelii:60

D3B1P2              	100.00%		Q7RND6              	100.00%
Bootstrap support for D3B1P2 as seed ortholog is 100%.
Bootstrap support for Q7RND6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 60 bits
Score difference with first non-orthologous sequence - P.pallidum:60 P.yoelii:60

D3B9L3              	100.00%		Q7RR46              	100.00%
Bootstrap support for D3B9L3 as seed ortholog is 100%.
Bootstrap support for Q7RR46 as seed ortholog is 100%.

Group of orthologs #1030. Best score 60 bits
Score difference with first non-orthologous sequence - P.pallidum:60 P.yoelii:60

D3BHF3              	100.00%		Q7RQ33              	100.00%
Bootstrap support for D3BHF3 as seed ortholog is 100%.
Bootstrap support for Q7RQ33 as seed ortholog is 100%.

Group of orthologs #1031. Best score 59 bits
Score difference with first non-orthologous sequence - P.pallidum:6 P.yoelii:8

D3B7P8              	100.00%		Q7R9F1              	100.00%
D3B0C5              	39.02%		
Bootstrap support for D3B7P8 as seed ortholog is 60%.
Alternative seed ortholog is D3B677 (6 bits away from this cluster)
Bootstrap support for Q7R9F1 as seed ortholog is 60%.
Alternative seed ortholog is Q7R738 (8 bits away from this cluster)

Group of orthologs #1032. Best score 59 bits
Score difference with first non-orthologous sequence - P.pallidum:59 P.yoelii:59

D3AYE2              	100.00%		Q7RGU9              	100.00%
Bootstrap support for D3AYE2 as seed ortholog is 100%.
Bootstrap support for Q7RGU9 as seed ortholog is 100%.

Group of orthologs #1033. Best score 59 bits
Score difference with first non-orthologous sequence - P.pallidum:59 P.yoelii:59

D3BAU4              	100.00%		Q7RE06              	100.00%
Bootstrap support for D3BAU4 as seed ortholog is 100%.
Bootstrap support for Q7RE06 as seed ortholog is 100%.

Group of orthologs #1034. Best score 59 bits
Score difference with first non-orthologous sequence - P.pallidum:59 P.yoelii:59

D3BF67              	100.00%		Q7RFN1              	100.00%
Bootstrap support for D3BF67 as seed ortholog is 100%.
Bootstrap support for Q7RFN1 as seed ortholog is 100%.

Group of orthologs #1035. Best score 58 bits
Score difference with first non-orthologous sequence - P.pallidum:58 P.yoelii:58

D3B7L8              	100.00%		Q7RJ87              	100.00%
D3BQC7              	46.93%		Q7RHU8              	28.67%
D3BR71              	46.60%		Q7RHR2              	12.92%
Bootstrap support for D3B7L8 as seed ortholog is 100%.
Bootstrap support for Q7RJ87 as seed ortholog is 100%.

Group of orthologs #1036. Best score 58 bits
Score difference with first non-orthologous sequence - P.pallidum:58 P.yoelii:58

D3BV49              	100.00%		Q7RHT0              	100.00%
D3BDR5              	19.54%		
Bootstrap support for D3BV49 as seed ortholog is 100%.
Bootstrap support for Q7RHT0 as seed ortholog is 100%.

Group of orthologs #1037. Best score 58 bits
Score difference with first non-orthologous sequence - P.pallidum:58 P.yoelii:58

D3B6R0              	100.00%		Q7RFX1              	100.00%
Bootstrap support for D3B6R0 as seed ortholog is 100%.
Bootstrap support for Q7RFX1 as seed ortholog is 100%.

Group of orthologs #1038. Best score 58 bits
Score difference with first non-orthologous sequence - P.pallidum:58 P.yoelii:58

D3B9I4              	100.00%		Q7RL39              	100.00%
Bootstrap support for D3B9I4 as seed ortholog is 100%.
Bootstrap support for Q7RL39 as seed ortholog is 100%.

Group of orthologs #1039. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:57

D3BCB9              	100.00%		Q7R813              	100.00%
                    	       		Q7R959              	77.35%
Bootstrap support for D3BCB9 as seed ortholog is 100%.
Bootstrap support for Q7R813 as seed ortholog is 100%.

Group of orthologs #1040. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:57

D3BFS4              	100.00%		Q7RJC6              	100.00%
D3B8I7              	29.52%		
Bootstrap support for D3BFS4 as seed ortholog is 100%.
Bootstrap support for Q7RJC6 as seed ortholog is 100%.

Group of orthologs #1041. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:11 P.yoelii:57

D3BNR6              	100.00%		Q7RG40              	100.00%
Bootstrap support for D3BNR6 as seed ortholog is 69%.
Alternative seed ortholog is D3BF72 (11 bits away from this cluster)
Bootstrap support for Q7RG40 as seed ortholog is 100%.

Group of orthologs #1042. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:57

D3BNJ3              	100.00%		Q7RHI6              	100.00%
Bootstrap support for D3BNJ3 as seed ortholog is 100%.
Bootstrap support for Q7RHI6 as seed ortholog is 100%.

Group of orthologs #1043. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:57

D3BU60              	100.00%		Q7RC07              	100.00%
Bootstrap support for D3BU60 as seed ortholog is 100%.
Bootstrap support for Q7RC07 as seed ortholog is 100%.

Group of orthologs #1044. Best score 57 bits
Score difference with first non-orthologous sequence - P.pallidum:57 P.yoelii:57

D3BKG7              	100.00%		Q7RPF9              	100.00%
Bootstrap support for D3BKG7 as seed ortholog is 100%.
Bootstrap support for Q7RPF9 as seed ortholog is 100%.

Group of orthologs #1045. Best score 56 bits
Score difference with first non-orthologous sequence - P.pallidum:56 P.yoelii:56

D3B0R2              	100.00%		Q7RF26              	100.00%
Bootstrap support for D3B0R2 as seed ortholog is 100%.
Bootstrap support for Q7RF26 as seed ortholog is 100%.

Group of orthologs #1046. Best score 56 bits
Score difference with first non-orthologous sequence - P.pallidum:56 P.yoelii:56

D3B3B7              	100.00%		Q7RNM5              	100.00%
Bootstrap support for D3B3B7 as seed ortholog is 100%.
Bootstrap support for Q7RNM5 as seed ortholog is 100%.

Group of orthologs #1047. Best score 56 bits
Score difference with first non-orthologous sequence - P.pallidum:56 P.yoelii:56

D3B406              	100.00%		Q7RTH5              	100.00%
Bootstrap support for D3B406 as seed ortholog is 100%.
Bootstrap support for Q7RTH5 as seed ortholog is 100%.

Group of orthologs #1048. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:55 P.yoelii:55

D3BED0              	100.00%		Q7RB92              	100.00%
Bootstrap support for D3BED0 as seed ortholog is 100%.
Bootstrap support for Q7RB92 as seed ortholog is 100%.

Group of orthologs #1049. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:55 P.yoelii:55

D3BIV3              	100.00%		Q7RBS5              	100.00%
Bootstrap support for D3BIV3 as seed ortholog is 100%.
Bootstrap support for Q7RBS5 as seed ortholog is 100%.

Group of orthologs #1050. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:55 P.yoelii:55

D3BT20              	100.00%		Q7RDG1              	100.00%
Bootstrap support for D3BT20 as seed ortholog is 100%.
Bootstrap support for Q7RDG1 as seed ortholog is 100%.

Group of orthologs #1051. Best score 55 bits
Score difference with first non-orthologous sequence - P.pallidum:4 P.yoelii:55

D3BFD9              	100.00%		Q7RSX1              	100.00%
Bootstrap support for D3BFD9 as seed ortholog is 56%.
Alternative seed ortholog is D3BEB9 (4 bits away from this cluster)
Bootstrap support for Q7RSX1 as seed ortholog is 100%.

Group of orthologs #1052. Best score 54 bits
Score difference with first non-orthologous sequence - P.pallidum:54 P.yoelii:54

D3AVN0              	100.00%		Q7RAS9              	100.00%
Bootstrap support for D3AVN0 as seed ortholog is 100%.
Bootstrap support for Q7RAS9 as seed ortholog is 100%.

Group of orthologs #1053. Best score 54 bits
Score difference with first non-orthologous sequence - P.pallidum:54 P.yoelii:54

D3BFK4              	100.00%		Q7RFR4              	100.00%
Bootstrap support for D3BFK4 as seed ortholog is 100%.
Bootstrap support for Q7RFR4 as seed ortholog is 100%.

Group of orthologs #1054. Best score 54 bits
Score difference with first non-orthologous sequence - P.pallidum:54 P.yoelii:54

D3B8P5              	100.00%		Q7RMM5              	100.00%
Bootstrap support for D3B8P5 as seed ortholog is 100%.
Bootstrap support for Q7RMM5 as seed ortholog is 100%.

Group of orthologs #1055. Best score 53 bits
Score difference with first non-orthologous sequence - P.pallidum:53 P.yoelii:53

D3BH52              	100.00%		Q7RKE1              	100.00%
D3BGT5              	14.29%		
Bootstrap support for D3BH52 as seed ortholog is 100%.
Bootstrap support for Q7RKE1 as seed ortholog is 100%.

Group of orthologs #1056. Best score 53 bits
Score difference with first non-orthologous sequence - P.pallidum:53 P.yoelii:53

D3BAT8              	100.00%		Q7PDL0              	100.00%
Bootstrap support for D3BAT8 as seed ortholog is 100%.
Bootstrap support for Q7PDL0 as seed ortholog is 100%.

Group of orthologs #1057. Best score 53 bits
Score difference with first non-orthologous sequence - P.pallidum:53 P.yoelii:53

D3BL89              	100.00%		Q7PCM2              	100.00%
Bootstrap support for D3BL89 as seed ortholog is 100%.
Bootstrap support for Q7PCM2 as seed ortholog is 100%.

Group of orthologs #1058. Best score 52 bits
Score difference with first non-orthologous sequence - P.pallidum:52 P.yoelii:52

D3B1P7              	100.00%		Q7RFP4              	100.00%
Bootstrap support for D3B1P7 as seed ortholog is 100%.
Bootstrap support for Q7RFP4 as seed ortholog is 100%.

Group of orthologs #1059. Best score 52 bits
Score difference with first non-orthologous sequence - P.pallidum:52 P.yoelii:52

D3B5K9              	100.00%		Q7RC69              	100.00%
Bootstrap support for D3B5K9 as seed ortholog is 100%.
Bootstrap support for Q7RC69 as seed ortholog is 100%.

Group of orthologs #1060. Best score 52 bits
Score difference with first non-orthologous sequence - P.pallidum:52 P.yoelii:52

D3BEI4              	100.00%		Q7RHH8              	100.00%
Bootstrap support for D3BEI4 as seed ortholog is 100%.
Bootstrap support for Q7RHH8 as seed ortholog is 100%.

Group of orthologs #1061. Best score 52 bits
Score difference with first non-orthologous sequence - P.pallidum:52 P.yoelii:52

D3BG33              	100.00%		Q7RP05              	100.00%
Bootstrap support for D3BG33 as seed ortholog is 100%.
Bootstrap support for Q7RP05 as seed ortholog is 100%.

Group of orthologs #1062. Best score 51 bits
Score difference with first non-orthologous sequence - P.pallidum:51 P.yoelii:51

D3BIU2              	100.00%		Q7RNG5              	100.00%
Bootstrap support for D3BIU2 as seed ortholog is 100%.
Bootstrap support for Q7RNG5 as seed ortholog is 100%.

Group of orthologs #1063. Best score 50 bits
Score difference with first non-orthologous sequence - P.pallidum:1 P.yoelii:50

D3AXM8              	100.00%		Q7RSS8              	100.00%
Bootstrap support for D3AXM8 as seed ortholog is 48%.
Alternative seed ortholog is D3B788 (1 bits away from this cluster)
Bootstrap support for Q7RSS8 as seed ortholog is 100%.

Group of orthologs #1064. Best score 50 bits
Score difference with first non-orthologous sequence - P.pallidum:50 P.yoelii:50

D3BJ73              	100.00%		Q7R729              	100.00%
Bootstrap support for D3BJ73 as seed ortholog is 100%.
Bootstrap support for Q7R729 as seed ortholog is 100%.

Group of orthologs #1065. Best score 49 bits
Score difference with first non-orthologous sequence - P.pallidum:49 P.yoelii:49

D3BHG7              	100.00%		Q7RAG9              	100.00%
Bootstrap support for D3BHG7 as seed ortholog is 100%.
Bootstrap support for Q7RAG9 as seed ortholog is 100%.

Group of orthologs #1066. Best score 48 bits
Score difference with first non-orthologous sequence - P.pallidum:48 P.yoelii:48

D3BGK9              	100.00%		Q7RE05              	100.00%
Bootstrap support for D3BGK9 as seed ortholog is 100%.
Bootstrap support for Q7RE05 as seed ortholog is 100%.

Group of orthologs #1067. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 P.yoelii:47

D3AVK7              	100.00%		Q7RFC8              	100.00%
Bootstrap support for D3AVK7 as seed ortholog is 100%.
Bootstrap support for Q7RFC8 as seed ortholog is 100%.

Group of orthologs #1068. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 P.yoelii:47

D3BCL9              	100.00%		Q7RCP8              	100.00%
Bootstrap support for D3BCL9 as seed ortholog is 100%.
Bootstrap support for Q7RCP8 as seed ortholog is 100%.

Group of orthologs #1069. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 P.yoelii:47

D3B536              	100.00%		Q7RLW1              	100.00%
Bootstrap support for D3B536 as seed ortholog is 100%.
Bootstrap support for Q7RLW1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 47 bits
Score difference with first non-orthologous sequence - P.pallidum:47 P.yoelii:47

D3BM04              	100.00%		Q7REC4              	100.00%
Bootstrap support for D3BM04 as seed ortholog is 100%.
Bootstrap support for Q7REC4 as seed ortholog is 100%.

Group of orthologs #1071. Best score 46 bits
Score difference with first non-orthologous sequence - P.pallidum:46 P.yoelii:46

D3BKA6              	100.00%		Q7RBI2              	100.00%
Bootstrap support for D3BKA6 as seed ortholog is 100%.
Bootstrap support for Q7RBI2 as seed ortholog is 100%.

Group of orthologs #1072. Best score 45 bits
Score difference with first non-orthologous sequence - P.pallidum:45 P.yoelii:45

D3BB95              	100.00%		Q7RST1              	100.00%
Bootstrap support for D3BB95 as seed ortholog is 100%.
Bootstrap support for Q7RST1 as seed ortholog is 100%.

Group of orthologs #1073. Best score 44 bits
Score difference with first non-orthologous sequence - P.pallidum:44 P.yoelii:44

D3B4Y3              	100.00%		Q7RIU6              	100.00%
Bootstrap support for D3B4Y3 as seed ortholog is 100%.
Bootstrap support for Q7RIU6 as seed ortholog is 100%.

Group of orthologs #1074. Best score 44 bits
Score difference with first non-orthologous sequence - P.pallidum:44 P.yoelii:44

D3BGG8              	100.00%		Q7RRQ2              	100.00%
Bootstrap support for D3BGG8 as seed ortholog is 100%.
Bootstrap support for Q7RRQ2 as seed ortholog is 100%.

Group of orthologs #1075. Best score 43 bits
Score difference with first non-orthologous sequence - P.pallidum:43 P.yoelii:43

D3B056              	100.00%		Q7RNH2              	100.00%
Bootstrap support for D3B056 as seed ortholog is 100%.
Bootstrap support for Q7RNH2 as seed ortholog is 100%.

Group of orthologs #1076. Best score 43 bits
Score difference with first non-orthologous sequence - P.pallidum:43 P.yoelii:43

D3BG34              	100.00%		Q7RAH9              	100.00%
Bootstrap support for D3BG34 as seed ortholog is 100%.
Bootstrap support for Q7RAH9 as seed ortholog is 100%.

Group of orthologs #1077. Best score 43 bits
Score difference with first non-orthologous sequence - P.pallidum:43 P.yoelii:43

D3BF08              	100.00%		Q7RFK7              	100.00%
Bootstrap support for D3BF08 as seed ortholog is 100%.
Bootstrap support for Q7RFK7 as seed ortholog is 100%.

Group of orthologs #1078. Best score 43 bits
Score difference with first non-orthologous sequence - P.pallidum:43 P.yoelii:43

D3BDV3              	100.00%		Q7RTI2              	100.00%
Bootstrap support for D3BDV3 as seed ortholog is 100%.
Bootstrap support for Q7RTI2 as seed ortholog is 100%.

Group of orthologs #1079. Best score 42 bits
Score difference with first non-orthologous sequence - P.pallidum:42 P.yoelii:42

D3BNI4              	100.00%		Q7RR36              	100.00%
D3BNI3              	52.90%		
D3AXT4              	18.13%		
D3AZN9              	14.95%		
D3BJ43              	14.39%		
Bootstrap support for D3BNI4 as seed ortholog is 100%.
Bootstrap support for Q7RR36 as seed ortholog is 100%.

Group of orthologs #1080. Best score 42 bits
Score difference with first non-orthologous sequence - P.pallidum:42 P.yoelii:42

D3B4H4              	100.00%		Q7RNC8              	100.00%
Bootstrap support for D3B4H4 as seed ortholog is 100%.
Bootstrap support for Q7RNC8 as seed ortholog is 100%.

Group of orthologs #1081. Best score 42 bits
Score difference with first non-orthologous sequence - P.pallidum:42 P.yoelii:42

D3BD68              	100.00%		Q7RG55              	100.00%
Bootstrap support for D3BD68 as seed ortholog is 100%.
Bootstrap support for Q7RG55 as seed ortholog is 100%.